BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy3966
         (392 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|193669290|ref|XP_001952250.1| PREDICTED: leucine-rich repeat-containing protein 58-like
           [Acyrthosiphon pisum]
          Length = 362

 Score =  406 bits (1043), Expect = e-110,   Method: Compositional matrix adjust.
 Identities = 205/388 (52%), Positives = 273/388 (70%), Gaps = 31/388 (7%)

Query: 5   YGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLY 64
           YGS+S S  SD+      SIKT+D +Y  LD +T+   ++ +       +P+ IDT+LL 
Sbjct: 6   YGSTSESSDSDAPIDDGSSIKTMDLNYLLLDGDTIQKHLDEMCKR---SRPDGIDTMLLN 62

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSN 124
           HN +   P   ++F +LR LD+SNNR+TH+P  +   PL+TL+A+NNL+  +  PK+   
Sbjct: 63  HNAMLSLPPAINRFQHLRVLDISNNRLTHVPDFVARLPLTTLVAKNNLIDDDGFPKEFGC 122

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
             +LKV N+SGN+L  FP Q+L + TL+YLY+G+N+L  +P++INKL +L  L LGGN L
Sbjct: 123 SAHLKVLNISGNRLSHFPKQLLSVTTLEYLYMGSNNLVEIPKDINKLIRLKFLCLGGNHL 182

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           +D+P T G L  L+AL LSDN LESLP +I+NLK                          
Sbjct: 183 SDVPVTLGMLDNLKALNLSDNSLESLPPAIANLK-------------------------- 216

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLK 304
             LKSL+LH N+LRTLP EII+LKCL+ELSLRDNPLV+RFVSDMT+ PPSLLEL++R++K
Sbjct: 217 -HLKSLMLHKNRLRTLPIEIISLKCLTELSLRDNPLVVRFVSDMTHNPPSLLELSARSVK 275

Query: 305 VHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLC 364
           ++ + Y +  LP NL++YL SAHHCVNPKCKGVFFD+R+EHIKFVDFCGKYRIPLLQYLC
Sbjct: 276 INNVQYGERDLPYNLIEYLSSAHHCVNPKCKGVFFDDRVEHIKFVDFCGKYRIPLLQYLC 335

Query: 365 SSRCITNSPNVMYGDVKNEDMMKKVLLG 392
           SS+CI N  N++ GD  + +MM+KVLLG
Sbjct: 336 SSKCIVNHRNIL-GDSTDSNMMRKVLLG 362


>gi|380012454|ref|XP_003690298.1| PREDICTED: leucine-rich repeat-containing protein 58-like [Apis
           florea]
          Length = 388

 Score =  380 bits (975), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 200/371 (53%), Positives = 256/371 (69%), Gaps = 42/371 (11%)

Query: 25  KTLDFSYSSLDSETLATQIELLPNNDY---NKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           KTLD SY  LD++ L         ND+    K PEN+DTLLL+ N L+  P    +FTNL
Sbjct: 57  KTLDLSYLMLDTQLL---------NDHFINTKNPENVDTLLLHQNRLNNIPQTIIRFTNL 107

Query: 82  RSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
            SLD+SN  +  LP  + + PL+ L+A++N LT +SLPK+  NL  L+  NLSGN+L  F
Sbjct: 108 NSLDISNCGLHRLPDFLGDCPLTCLVAKHNNLTNDSLPKNFQNLSRLRELNLSGNRLTDF 167

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P+QILD+  +KYLYLG N +  + ++I KL +LHVLS+GGN LT++P T G+L  L+ALI
Sbjct: 168 PLQILDLTEIKYLYLGGNQITEISKDIWKLQRLHVLSMGGNRLTEVPSTLGELMSLQALI 227

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           L DN LESLP+SI+ L  LKSLLLH N+LRTLPTEIITL                     
Sbjct: 228 LCDNMLESLPSSIAKLTNLKSLLLHKNRLRTLPTEIITL--------------------- 266

Query: 262 TEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQ 321
                 KCL+ELSLRDNPLV+RFVSDMT+ PPSLLELA+R +K ++I Y +E +P+NLV+
Sbjct: 267 ------KCLTELSLRDNPLVVRFVSDMTHNPPSLLELAARVIKTNDIRYDRESIPRNLVE 320

Query: 322 YLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCITNSPNVMYGDVK 381
           YL S H CVN KCKGVFF+NR+EH+KFVDFCGKYR+PLLQYLCS +CI +       +V 
Sbjct: 321 YLNSGHRCVNSKCKGVFFNNRVEHVKFVDFCGKYRLPLLQYLCSRKCIESRDG---DEVV 377

Query: 382 NEDMMKKVLLG 392
           +  M++KVLLG
Sbjct: 378 SGAMIRKVLLG 388


>gi|328788137|ref|XP_394765.2| PREDICTED: leucine-rich repeat-containing protein 58-like [Apis
           mellifera]
          Length = 347

 Score =  378 bits (971), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 199/371 (53%), Positives = 256/371 (69%), Gaps = 42/371 (11%)

Query: 25  KTLDFSYSSLDSETLATQIELLPNNDY---NKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           KTLD SY  LD++ L         ND+    K PEN+DTLLL+ N L+  P    +FTNL
Sbjct: 16  KTLDLSYLMLDTQLL---------NDHFTNTKNPENVDTLLLHQNRLNNIPQMIVRFTNL 66

Query: 82  RSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
            SLD+SN  +  LP  + + PL+ L+A++N LT +SLPK+  NL  L+  NLSGN+L  F
Sbjct: 67  NSLDISNCGLHRLPDFLGDCPLTCLVAKHNNLTNDSLPKNFQNLSRLRELNLSGNRLTNF 126

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P+QILD+  +KYLYLG N +  + +++ KL +LHVLS+GGN LT++P T G+L  L+ALI
Sbjct: 127 PMQILDLTEIKYLYLGGNQITEISKDVWKLQRLHVLSMGGNRLTEVPSTLGELMSLQALI 186

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           L DN LESLP+SI+ L  LKSLLLH N+LRTLPTEIITL                     
Sbjct: 187 LCDNMLESLPSSIAKLTNLKSLLLHKNRLRTLPTEIITL--------------------- 225

Query: 262 TEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQ 321
                 KCL+ELSLRDNPLV+RFVSDMT+ PPSLLELA+R +K ++I Y +E +P+NLV+
Sbjct: 226 ------KCLTELSLRDNPLVVRFVSDMTHNPPSLLELAARVIKTNDIRYDRESIPRNLVE 279

Query: 322 YLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCITNSPNVMYGDVK 381
           YL S H CVN KCKGVFF+NR+EH+KFVDFCGKYR+PLLQYLCS +CI +       +V 
Sbjct: 280 YLNSGHRCVNSKCKGVFFNNRVEHVKFVDFCGKYRLPLLQYLCSRKCIESRDG---DEVV 336

Query: 382 NEDMMKKVLLG 392
           +  M++KVLLG
Sbjct: 337 SGAMIRKVLLG 347


>gi|307183838|gb|EFN70476.1| Leucine-rich repeat-containing protein 58 [Camponotus floridanus]
          Length = 348

 Score =  378 bits (970), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 201/376 (53%), Positives = 257/376 (68%), Gaps = 49/376 (13%)

Query: 24  IKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRS 83
           ++TLD SY SLD E +  Q     N  Y   PE++DTLLL  N L+  P + ++FT+L S
Sbjct: 15  LRTLDLSYLSLDDEIMDKQ---FLNTKY---PEHVDTLLLSQNRLTTLPISINRFTSLNS 68

Query: 84  LDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPI 143
           LD+SN  +T LP    + PL+ LIA++N LT + L KD  NL NL+  NLSGN+L +FP 
Sbjct: 69  LDISNCGLTKLPNFWEDCPLTCLIAKHNNLTNDGLAKDFENLANLRELNLSGNRLTEFPN 128

Query: 144 QILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILS 203
           Q+LD+  L+YLYLG N +N + ++I KL +L +LS+G N LT++P T G L  L+AL+L 
Sbjct: 129 QVLDLALLRYLYLGGNRINEISKDIWKLQRLRILSMGDNRLTEVPSTLGQLKTLQALVLC 188

Query: 204 DNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTE 263
           DN LESLP+SI+NL                             LK+L LH N+LRTLPTE
Sbjct: 189 DNMLESLPSSIANLT---------------------------NLKTLSLHKNRLRTLPTE 221

Query: 264 IITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYL 323
           II LKCL+ELSLRDNPLV+RFVSDMT+ PP+LLELA+R +K+ ++ Y  E LP+NLVQYL
Sbjct: 222 IIKLKCLTELSLRDNPLVVRFVSDMTHNPPTLLELAARVIKISDVRYDDETLPRNLVQYL 281

Query: 324 ESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCITNSPNVMYGDVKNE 383
            SAHHCVNPKCKGVFF+NR+EHIKFVDFCGKYR+PLLQYLCSS+CI         +V+N 
Sbjct: 282 NSAHHCVNPKCKGVFFNNRVEHIKFVDFCGKYRLPLLQYLCSSKCI---------EVRNS 332

Query: 384 D-------MMKKVLLG 392
           D       M++KVLLG
Sbjct: 333 DEELVSGAMIRKVLLG 348


>gi|383847867|ref|XP_003699574.1| PREDICTED: leucine-rich repeat-containing protein 58-like
           [Megachile rotundata]
          Length = 347

 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 197/368 (53%), Positives = 249/368 (67%), Gaps = 36/368 (9%)

Query: 25  KTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSL 84
           KTLD SY  LD + L             K PE +DTLLL+ N L   P N  +FTNL SL
Sbjct: 16  KTLDLSYLMLDPQVLTDHFM------NAKCPEQVDTLLLHQNRLPSVPQNIVRFTNLNSL 69

Query: 85  DLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQ 144
           D+SN  +  LP  + + PLS L+A++N LT +SLPK   NL  L+  NLSGN+L  FP Q
Sbjct: 70  DISNCGLNELPDFLGDCPLSCLVAKHNNLTNDSLPKCFENLSGLRELNLSGNRLTDFPDQ 129

Query: 145 ILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD 204
           ILD+  LKYLYLG N +  + +++ KL +LHVLS+GGN LT++P T G+L  L+AL+L D
Sbjct: 130 ILDLAELKYLYLGGNYITEISKDVWKLQRLHVLSMGGNRLTEVPSTLGELKSLQALVLCD 189

Query: 205 NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           N LE+LP+SI+ L  LKSLLLH N+LRTLPTEIIT                         
Sbjct: 190 NMLENLPSSIAKLTNLKSLLLHKNRLRTLPTEIIT------------------------- 224

Query: 265 ITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLE 324
             L+CL+ELSLRDNPLV+RFVSDMT+ PPSLLELA+R +K  +I Y +E LP+NLV+YL 
Sbjct: 225 --LRCLTELSLRDNPLVVRFVSDMTHNPPSLLELAARVIKTIDIQYDEESLPRNLVEYLN 282

Query: 325 SAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCITNSPNVMYGDVKNED 384
           S H CVNPKCKGVFF+NR+EH+KFVDFCGKYR+PLLQYLCS +C+ +       +V +  
Sbjct: 283 SGHRCVNPKCKGVFFNNRVEHVKFVDFCGKYRLPLLQYLCSRKCVESRDG---DEVVSGA 339

Query: 385 MMKKVLLG 392
           M++KVLLG
Sbjct: 340 MIRKVLLG 347


>gi|307197002|gb|EFN78377.1| Leucine-rich repeat-containing protein 58 [Harpegnathos saltator]
          Length = 347

 Score =  368 bits (944), Expect = 3e-99,   Method: Compositional matrix adjust.
 Identities = 194/368 (52%), Positives = 251/368 (68%), Gaps = 35/368 (9%)

Query: 25  KTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSL 84
           KTLD SY SL +E L  Q+  +      K PE++DTLLL  N LS  P +  +FT L +L
Sbjct: 15  KTLDLSYLSLSAEELDEQLMAI------KSPEHVDTLLLKQNRLSNLPSSVIRFTGLNTL 68

Query: 85  DLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQ 144
           D+S   ++ LP    + PL+ LIA++N LT + L K   NL +++  NLSGN+L +FP Q
Sbjct: 69  DISGCGLSRLPDFWPDCPLTCLIAKHNQLTNDGLVKAFENLTSVRELNLSGNRLTEFPDQ 128

Query: 145 ILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD 204
           +L++  LKYLYLG N +  +   I KL +L VLS+GGN L ++P T G L  L+AL+L D
Sbjct: 129 VLNLVDLKYLYLGGNLIGEITENIWKLQRLQVLSMGGNRLLEVPSTLGQLKALQALVLCD 188

Query: 205 NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           N LESLP+SI+NL  LKSLLLH N+LRTLPTEII L                        
Sbjct: 189 NMLESLPSSIANLTRLKSLLLHKNRLRTLPTEIIKL------------------------ 224

Query: 265 ITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLE 324
              KCL+ELSLRDNPLV+RFVSDMT+ PPSLLELA+R +K ++I Y  E +P+NL++YL+
Sbjct: 225 ---KCLTELSLRDNPLVVRFVSDMTHDPPSLLELAARVIKTNDIRYDDEDVPRNLLEYLD 281

Query: 325 SAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCITNSPNVMYGDVKNED 384
           SAHHCVNPKCKGVFF+NR+EH+KFVDFCGKYR+PLLQYLCSS+CI   P     ++ +  
Sbjct: 282 SAHHCVNPKCKGVFFNNRVEHVKFVDFCGKYRLPLLQYLCSSKCI--GPRDSDEELVSGA 339

Query: 385 MMKKVLLG 392
           M++KVLLG
Sbjct: 340 MIRKVLLG 347


>gi|332018302|gb|EGI58907.1| Leucine-rich repeat-containing protein 58 [Acromyrmex echinatior]
          Length = 348

 Score =  366 bits (939), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 199/370 (53%), Positives = 248/370 (67%), Gaps = 35/370 (9%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           +++TLD SY +LD+E L  Q          K PE +DTLLL  N L+  P N  +F NL 
Sbjct: 14  ALRTLDLSYLALDNEVLDKQFL------NTKNPEQVDTLLLSQNLLTTVPANIIRFINLN 67

Query: 83  SLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
            LD+SN  +T L     + PL+ LIA++N LT + L KD  NL NL+  NLSGN+L +FP
Sbjct: 68  FLDISNCGLTSLSNFWADCPLTCLIAKHNNLTNDGLAKDFENLVNLRELNLSGNRLTEFP 127

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
            QI D+  LKYLYLG N ++ + ++I KL  L VLS+G N LT++P T G L  L+AL+L
Sbjct: 128 NQIFDLSGLKYLYLGGNRISEITKDIWKLQGLRVLSMGNNRLTEVPCTLGQLKTLQALVL 187

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
            DN LESLP+SI+NL                             LK+L LH N+LRTLPT
Sbjct: 188 CDNMLESLPSSIANLT---------------------------NLKTLSLHKNRLRTLPT 220

Query: 263 EIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQY 322
           EIITLKCL+ELSLRDNPLV+RFVSDMT+ PPSLLELA+R +K  +I Y  E +P NLVQY
Sbjct: 221 EIITLKCLTELSLRDNPLVVRFVSDMTHNPPSLLELAARIIKSSDIRYDNESIPHNLVQY 280

Query: 323 LESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCITNSPNVMYGDVKN 382
           L SAH CVNPKCKGVFF+NR+EHIKFVDFCGKYR+PLLQYLCSS+CI   P   + +  +
Sbjct: 281 LNSAHSCVNPKCKGVFFNNRVEHIKFVDFCGKYRLPLLQYLCSSKCI--EPRDNHEEPVS 338

Query: 383 EDMMKKVLLG 392
             M++KVLLG
Sbjct: 339 GAMIRKVLLG 348


>gi|322802762|gb|EFZ22974.1| hypothetical protein SINV_03581 [Solenopsis invicta]
          Length = 402

 Score =  366 bits (939), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 190/340 (55%), Positives = 238/340 (70%), Gaps = 29/340 (8%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNL 112
           K PE +DTLLL HN+L   P + ++F NL SLD+SN  +  LP    + PL+ LIA++N 
Sbjct: 92  KHPEQVDTLLLSHNSLMTLPASINRFNNLNSLDISNCGLIKLPDFWIHCPLTCLIAKHNN 151

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT + L KD  NL NL+  NLSGN   +FP QILD+P L+YLYLG N +N + ++I KL 
Sbjct: 152 LTNDGLAKDFENLANLRELNLSGNSFTEFPEQILDLPGLRYLYLGGNHINEITKDIWKLQ 211

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L VLS+G N LT++P T G+L  L+AL+L DN LESLP+SI+NL  LK+L LH N+LRT
Sbjct: 212 SLRVLSMGDNRLTEVPSTLGELKALQALVLCDNMLESLPSSIANLTNLKTLSLHKNRLRT 271

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKP 292
           LPTEIITL                           KCL+ELSLRDNPLV+RFVSDMT+ P
Sbjct: 272 LPTEIITL---------------------------KCLTELSLRDNPLVVRFVSDMTHNP 304

Query: 293 PSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFC 352
           PSLLE+A+R +K  +I Y  E +P NLVQYL SAHHCVNP+CKGV+F+NRIEHIKFVDFC
Sbjct: 305 PSLLEVAARVIKNSDIRYDNESIPHNLVQYLNSAHHCVNPQCKGVYFNNRIEHIKFVDFC 364

Query: 353 GKYRIPLLQYLCSSRCITNSPNVMYGDVKNEDMMKKVLLG 392
           GKYR+PLLQYLCSS+CI   P     ++ +  M++KVLLG
Sbjct: 365 GKYRLPLLQYLCSSKCI--EPRGSNEELVSGAMIRKVLLG 402


>gi|340718794|ref|XP_003397848.1| PREDICTED: leucine-rich repeat-containing protein 58-like [Bombus
           terrestris]
          Length = 347

 Score =  362 bits (928), Expect = 2e-97,   Method: Compositional matrix adjust.
 Identities = 193/369 (52%), Positives = 248/369 (67%), Gaps = 38/369 (10%)

Query: 25  KTLDFSYSSLDSETLATQIELLPNNDYNKK-PENIDTLLLYHNNLSFFPDNASKFTNLRS 83
           KTLD SY  LD +       LL ++  N K PE++DTLLL+ N L+  P    +FTNL S
Sbjct: 16  KTLDLSYLMLDPQ-------LLDDHFINAKNPEHVDTLLLHQNRLTSIPQTIVRFTNLNS 68

Query: 84  LDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPI 143
           LD+SN  +  LP    + PL+ L+A++N LT +SLPK+  NL  L+  NLSGN+L  FP 
Sbjct: 69  LDVSNCGLHRLPDFFEDCPLTCLVAKHNNLTNDSLPKNFQNLSRLRELNLSGNRLTDFPE 128

Query: 144 QILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILS 203
           Q+ D+  LKYLYLG N +  + +++ KL +L VLS+GGN LT++P T G+L  L+AL+L 
Sbjct: 129 QVFDLTDLKYLYLGGNQITEISKDVWKLQRLQVLSMGGNRLTEVPSTLGELMSLQALVLC 188

Query: 204 DNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTE 263
           DN LESLP+SI+ L  LKSLLLH N+LRTLPTEII                         
Sbjct: 189 DNMLESLPSSIAKLTNLKSLLLHKNRLRTLPTEII------------------------- 223

Query: 264 IITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYL 323
             TL CL+ELSLRDNPLV+RFVSDMT+ PPSLLELA+R +  + I Y  E +P+NLV+YL
Sbjct: 224 --TLNCLTELSLRDNPLVVRFVSDMTHNPPSLLELAARVIMTNNIQYDGESIPRNLVEYL 281

Query: 324 ESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCITNSPNVMYGDVKNE 383
            S H CVN KCKGVFF+NR+EH+KFVDFCGKYR+PLLQYLCS +CI +       +V + 
Sbjct: 282 NSGHRCVNSKCKGVFFNNRVEHVKFVDFCGKYRLPLLQYLCSRKCIESRDG---DEVVSG 338

Query: 384 DMMKKVLLG 392
            M++KVLLG
Sbjct: 339 AMIRKVLLG 347


>gi|350396113|ref|XP_003484445.1| PREDICTED: leucine-rich repeat-containing protein 58-like [Bombus
           impatiens]
          Length = 347

 Score =  361 bits (927), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 192/369 (52%), Positives = 248/369 (67%), Gaps = 38/369 (10%)

Query: 25  KTLDFSYSSLDSETLATQIELLPNNDYNKK-PENIDTLLLYHNNLSFFPDNASKFTNLRS 83
           KTLD SY  LD +       LL ++  N K PE++DTLLL+ N L+  P    +FTNL+S
Sbjct: 16  KTLDLSYLMLDPQ-------LLDDHFINAKNPEHVDTLLLHQNRLTSIPQTIVRFTNLKS 68

Query: 84  LDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPI 143
           L +SN  +  LP    + PL+ L+A++N  T +SLPK+  NL  L+  NLSGN+L  FP 
Sbjct: 69  LVVSNCGLHRLPDFFEDCPLTCLVAKHNNFTNDSLPKNFQNLSRLRELNLSGNRLTDFPE 128

Query: 144 QILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILS 203
           Q+ D+  LKYLYLG N +  + +++ KL +L VLS+GGN LT++P T G+L  L+AL+L 
Sbjct: 129 QVFDLTDLKYLYLGGNQITEISKDVWKLQRLQVLSMGGNRLTEVPSTLGELMSLQALVLC 188

Query: 204 DNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTE 263
           DN LESLP+SI+ L  LKSLLLH N+LRTLPTEIITL                       
Sbjct: 189 DNMLESLPSSIAKLTNLKSLLLHKNRLRTLPTEIITL----------------------- 225

Query: 264 IITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYL 323
               KCL+ELSLRDNPLV+RFVSDMT+ PPSLLELA+R +  + I Y  E +P+NLV+YL
Sbjct: 226 ----KCLTELSLRDNPLVVRFVSDMTHNPPSLLELAARVIMTNNIQYDGESIPRNLVEYL 281

Query: 324 ESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCITNSPNVMYGDVKNE 383
            S H CVN KCKGVFF+NR+EH+KFVDFCGKYR+PLLQYLCS +CI +       +V + 
Sbjct: 282 NSGHRCVNSKCKGVFFNNRVEHVKFVDFCGKYRLPLLQYLCSRKCIESRDG---DEVVSG 338

Query: 384 DMMKKVLLG 392
            M++KVLLG
Sbjct: 339 AMIRKVLLG 347


>gi|158292193|ref|XP_313752.4| AGAP004458-PA [Anopheles gambiae str. PEST]
 gi|347971944|ref|XP_003436822.1| AGAP004458-PB [Anopheles gambiae str. PEST]
 gi|347971946|ref|XP_003436823.1| AGAP004458-PC [Anopheles gambiae str. PEST]
 gi|157017319|gb|EAA44590.4| AGAP004458-PA [Anopheles gambiae str. PEST]
 gi|333469100|gb|EGK97180.1| AGAP004458-PB [Anopheles gambiae str. PEST]
 gi|333469101|gb|EGK97181.1| AGAP004458-PC [Anopheles gambiae str. PEST]
          Length = 356

 Score =  359 bits (921), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 202/388 (52%), Positives = 258/388 (66%), Gaps = 42/388 (10%)

Query: 10  SSDSSDSDSFKTVSIKTLDFSYSS---LDSETLATQIELLPNNDYNKKPENIDTLLLYHN 66
           +SDS DSDS +    KT+D  +S+   LD +       LL  +   K  E+I+T+LL HN
Sbjct: 6   TSDSCDSDSREQ---KTVDLGHSNKRHLDDD-------LLRVSKSKKLAEDIETVLLNHN 55

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM--SN 124
            L   P + + FTNL+ LDLSNNR+  LP+ IT   L+TLI +NNLLT +SLPK +  + 
Sbjct: 56  KLIRVPLSLNDFTNLKVLDLSNNRLEELPEVITQCQLTTLIVKNNLLTDKSLPKSLLGAA 115

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
              LK  NLSGN+   FP Q++++ +LKYLYLG N + +V ++I KL  L +LSLGGN +
Sbjct: 116 GHGLKELNLSGNRFAHFPEQVIELRSLKYLYLGGNQITNVSKDIWKLQNLQLLSLGGNLI 175

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T+IP+T G L  L AL+L DN LE+LPASI+ L                           
Sbjct: 176 TEIPETVGLLNHLHALVLCDNLLEALPASIARLV-------------------------- 209

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLK 304
             LKSLLLH N+LR LP EIITL+ L+ELSLRDNPLV+RFV DMT  PPSLLELA RT+K
Sbjct: 210 -NLKSLLLHKNRLRHLPREIITLRNLTELSLRDNPLVVRFVKDMTLNPPSLLELAGRTVK 268

Query: 305 VHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLC 364
              I Y+ E LP+ L++YL++A+ CVNP CKGVFFDNR+EHIKFVDFCGKYRIPLLQYLC
Sbjct: 269 TCAIRYAAEDLPRTLIEYLQTANCCVNPNCKGVFFDNRVEHIKFVDFCGKYRIPLLQYLC 328

Query: 365 SSRCITNSPNVMYGDVKNEDMMKKVLLG 392
           SS+C+ ++ +   G   N  MM+KVLLG
Sbjct: 329 SSKCVADTSSSDPGSEPNSSMMRKVLLG 356


>gi|242012419|ref|XP_002426930.1| Ras suppressor protein, putative [Pediculus humanus corporis]
 gi|212511159|gb|EEB14192.1| Ras suppressor protein, putative [Pediculus humanus corporis]
          Length = 350

 Score =  355 bits (911), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 185/388 (47%), Positives = 261/388 (67%), Gaps = 40/388 (10%)

Query: 5   YGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLY 64
           Y S++  D S  D      + TLD SYS  DSE +  +++ L      +   ++ T+LLY
Sbjct: 3   YYSANEYDCSSEDE----DVSTLDLSYSGFDSEQMRKKLDEL-----RESGNDVTTVLLY 53

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSN 124
            N++   P    +F  L+ LD+S+N ++ LP  I   PL+TLIA+NN L+ +SLP   ++
Sbjct: 54  QNSMDAVPGVIGRFGRLKYLDISSNGLSRLPPEIGLCPLTTLIAKNNRLSDKSLPPVFTD 113

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L +LK  NLSGN    FP +IL++ +++YLY+G N+L+ +P+EI+KL  L VLSLGGN L
Sbjct: 114 LTDLKELNLSGNDFANFPPEILNLKSIRYLYMGGNNLSKIPKEISKLQSLQVLSLGGNKL 173

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           TD+P                       +++  LK L +L+L +N+L +LP EI  L    
Sbjct: 174 TDVP-----------------------STLGQLKKLTALILSDNQLESLPREIAKLT--- 207

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLK 304
            +LKSLLLH NKL+TLPTEI++LKC++ELSLRDNPLV+RFVSDMTY  PSLLELA+R++K
Sbjct: 208 -ELKSLLLHKNKLKTLPTEIVSLKCMTELSLRDNPLVVRFVSDMTYAVPSLLELAARSIK 266

Query: 305 VHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLC 364
           +H + +S + LP+ L++YL +A HC+NPKCKGVFFD+R+EH+KFVDFCGKYR+PLLQYLC
Sbjct: 267 LHSVKFSPKDLPKRLLEYLNNARHCINPKCKGVFFDSRVEHVKFVDFCGKYRVPLLQYLC 326

Query: 365 SSRCITNSPNVMYGDVKNEDMMKKVLLG 392
           SS CI +   +      + D+++KVLLG
Sbjct: 327 SSSCIDDKNEIEV----DSDLIRKVLLG 350


>gi|357610894|gb|EHJ67199.1| hypothetical protein KGM_10804 [Danaus plexippus]
          Length = 357

 Score =  349 bits (895), Expect = 1e-93,   Method: Compositional matrix adjust.
 Identities = 192/385 (49%), Positives = 258/385 (67%), Gaps = 34/385 (8%)

Query: 10  SSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLS 69
           +SDS DSDS +    KTLD S  SLDS T+ +++E +   D     EN +  LLY N + 
Sbjct: 5   TSDSCDSDSREQ---KTLDLSNRSLDSVTITSELESII--DEKDCAENYEIFLLYGNRIK 59

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKN-L 128
             P++ ++F NL+ LD+SNNR+T LP  +   PLS+LIA++N LT ESLPK     +N L
Sbjct: 60  SLPESINQFCNLKILDVSNNRLTSLPDILDICPLSSLIAKHNHLTNESLPKSFLKTRNTL 119

Query: 129 KVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
           +  NLSGN++  FP Q+L + TLKYLYLG N + ++P++I KL  L +LS+GGN +T++P
Sbjct: 120 RELNLSGNRINFFPEQLLQLTTLKYLYLGGNVIINIPKDIWKLNSLQILSIGGNQITEVP 179

Query: 189 DTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLK 248
           +                       S+  L  L++L+L +N++  LP+ I  LK    +L+
Sbjct: 180 E-----------------------SVGALTSLQALVLSDNQIEQLPSSIANLK----QLR 212

Query: 249 SLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEI 308
           SL +  N+L+TLPT+II L+CL+ELSLRDNPLV+RFV DMT +PPSLLELA RT+K+H+I
Sbjct: 213 SLKIDKNRLKTLPTQIIKLRCLTELSLRDNPLVVRFVRDMTLQPPSLLELAGRTIKLHQI 272

Query: 309 DYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRC 368
                 +P  L++YL SA  CVNPKCKGVFF+NR+EHIKFVDFCG+YRIPLLQYLCSSRC
Sbjct: 273 AIKPGDVPATLIKYLTSAQCCVNPKCKGVFFNNRVEHIKFVDFCGRYRIPLLQYLCSSRC 332

Query: 369 ITNSPNVMYGD-VKNEDMMKKVLLG 392
           IT S      D +    MM+KVLLG
Sbjct: 333 ITGSWESREVDNITPSHMMRKVLLG 357


>gi|170040416|ref|XP_001847996.1| internalin A [Culex quinquefasciatus]
 gi|167863954|gb|EDS27337.1| internalin A [Culex quinquefasciatus]
          Length = 355

 Score =  347 bits (889), Expect = 8e-93,   Method: Compositional matrix adjust.
 Identities = 196/388 (50%), Positives = 255/388 (65%), Gaps = 43/388 (11%)

Query: 10  SSDSSDSDSFKTVSIKTLDFSYSS---LDSETLATQIELLPNNDYNKKPENIDTLLLYHN 66
           +SDS DSD+ +    KT+DF +++   LD +       LL      K  E+I+T+LL HN
Sbjct: 6   TSDSGDSDAREQ---KTVDFGHANKRHLDED-------LLRMCKTKKLAEDIETVLLNHN 55

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM-SNL 125
           NL+  P + ++F NLR LDLSNN +  +P+A+    LSTLI +NN L  +SLPK M +  
Sbjct: 56  NLAVVPASIAEFENLRVLDLSNNSLDRIPEAVMQCQLSTLIVKNNRLGDDSLPKSMLAAG 115

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
             LK  NLSGN+  QFP Q+ ++  LKYLYLG N + +V ++I KL  L +LSLGGN +T
Sbjct: 116 TTLKELNLSGNRFTQFPEQVTELKALKYLYLGGNQITNVSKDIWKLQNLQLLSLGGNLIT 175

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           +IPDT G L  L AL+L DN LE+LP SI+ L  LKSLLLH N L+ LP +I        
Sbjct: 176 EIPDTVGLLNNLHALVLCDNLLEALPPSIARLVHLKSLLLHKNHLKHLPLDI-------- 227

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKV 305
                              ITLK L+ELSLRDNPLV+RFV DMT  PP+LLELA+R+ K+
Sbjct: 228 -------------------ITLKNLTELSLRDNPLVVRFVKDMTLNPPTLLELAARSAKI 268

Query: 306 HEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCS 365
             + Y    LP+ L++YL++A+ CVNP CKGVFFDNR+EHIKFVDFCGKYRIPLLQYLCS
Sbjct: 269 ASVPYGPGDLPRTLIEYLQTANCCVNPNCKGVFFDNRVEHIKFVDFCGKYRIPLLQYLCS 328

Query: 366 SRCITN-SPNVMYGDVKNEDMMKKVLLG 392
           S+CI +   +V +G+  +  MM+KVLLG
Sbjct: 329 SKCIDDPGASVSHGEASSS-MMRKVLLG 355


>gi|332372610|gb|AEE61447.1| unknown [Dendroctonus ponderosae]
          Length = 354

 Score =  345 bits (886), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 189/383 (49%), Positives = 251/383 (65%), Gaps = 33/383 (8%)

Query: 10  SSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLS 69
           +SDSSD ++      K +D +Y   + E++   +     N  +KK  +++ ++L+HN L+
Sbjct: 5   TSDSSDGETGN----KAIDLAYLLKNPESVDKLLAQYFENG-SKKFLDVENMILHHNELT 59

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLK 129
             P N ++F N+R LDLSNN +T LP       LS L+A+NN L  E+LPKD S    LK
Sbjct: 60  ALPSNLTRFINMRVLDLSNNGLTVLPNIFQYCQLSKLVAKNNRLDNEALPKDFSYCPTLK 119

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
             NL+GN L +FP QIL   +L+YLYLG N + ++ +EI +  +L VLSLGGN+++D+P 
Sbjct: 120 ELNLAGNNLSEFPDQILTFTSLRYLYLGGNGMKNISKEIWRFKQLQVLSLGGNNISDVPV 179

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
           + G L  L+AL+L DNQLESLPAS++NL  L+SLL+H N+L+TLP E             
Sbjct: 180 SVGLLKSLQALVLCDNQLESLPASVANLHNLRSLLIHKNRLKTLPPE------------- 226

Query: 250 LLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEID 309
                         II L+ LSELSLRDNPLV+RFVSD+ ++P SLLEL++R +K+H I 
Sbjct: 227 --------------IIALRNLSELSLRDNPLVVRFVSDIQHQPASLLELSARAIKLHNIS 272

Query: 310 YSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCI 369
                LP +L QYLESAH CVNP CKGV+FDNR+EHIKFVDFCGKYRIPLLQYLCSS+C 
Sbjct: 273 APVGDLPHSLAQYLESAHRCVNPHCKGVYFDNRVEHIKFVDFCGKYRIPLLQYLCSSKCA 332

Query: 370 TNSPNVMYGDVKNEDMMKKVLLG 392
           + SPN          +MKKVLLG
Sbjct: 333 S-SPNEEVIKPHRTYLMKKVLLG 354


>gi|195456954|ref|XP_002075361.1| GK17622 [Drosophila willistoni]
 gi|194171446|gb|EDW86347.1| GK17622 [Drosophila willistoni]
          Length = 369

 Score =  343 bits (881), Expect = 6e-92,   Method: Compositional matrix adjust.
 Identities = 195/396 (49%), Positives = 247/396 (62%), Gaps = 44/396 (11%)

Query: 10  SSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLS 69
           +SDSSD+DS +    KT+DF   +LD  TL   +   P+    K   +I+TLLL HN L 
Sbjct: 5   TSDSSDTDSREQ---KTIDFGRMNLDLITLEDHLSS-PHKALAKSKSDIETLLLNHNRLV 60

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKN-- 127
             P    +FTNL+ LDLS+N +T LP AI   PL TLIA+NNLLT  SLPK     +   
Sbjct: 61  GLPSILQQFTNLKILDLSSNALTQLPDAICQLPLVTLIAKNNLLTNSSLPKSFMTKQQTG 120

Query: 128 -----LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
                LK  NLSGNQL  FP Q+ ++  LKYLY+G N ++ + ++I K+  LHVLSLGGN
Sbjct: 121 NGGSTLKELNLSGNQLTHFPEQVTEMRQLKYLYVGGNKISSISKDIWKMQGLHVLSLGGN 180

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            + ++P+T G L QL+AL+L DN +E+LP SI+ LK                        
Sbjct: 181 LINEVPETVGSLSQLQALVLCDNLIENLPMSIARLK------------------------ 216

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRT 302
               LKSLLLH N+LR LP +I+ LK L+ELSLRDNPLV+RFV DM  KPP+LLELA R 
Sbjct: 217 ---NLKSLLLHKNRLRHLPKDIVALKNLTELSLRDNPLVVRFVQDMALKPPTLLELAGRM 273

Query: 303 LKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQY 362
           +K          +P+ L +YL SA+ CVNP CKGVFFDNR+EHIKFVDFCGKYR+PLLQY
Sbjct: 274 VKASGQRPGPYDIPRTLAEYLNSANCCVNPNCKGVFFDNRVEHIKFVDFCGKYRVPLLQY 333

Query: 363 LCSSRCIT------NSPNVMYGDVKNEDMMKKVLLG 392
           LCSS+CI        +P+       +  MM+KVLLG
Sbjct: 334 LCSSKCIEPEQTALRAPSSNNASASSGFMMRKVLLG 369


>gi|195481934|ref|XP_002101839.1| GE15388 [Drosophila yakuba]
 gi|194189363|gb|EDX02947.1| GE15388 [Drosophila yakuba]
          Length = 372

 Score =  342 bits (878), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 199/399 (49%), Positives = 247/399 (61%), Gaps = 47/399 (11%)

Query: 10  SSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLS 69
           +SDSSD+DS +    KTLDF   SLD  TL   +   P     K   +I+T+LL HN L 
Sbjct: 5   TSDSSDTDSREQ---KTLDFGRMSLDLVTLEDHLAS-PQKALLKSSGDIETMLLNHNRLV 60

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKD----MSNL 125
             P    +F NL+ LDLS+N IT LP A+   PL TLIA+NNLLT  SLPK     M+N 
Sbjct: 61  GLPRLLLQFGNLKILDLSSNAITTLPDAVCQLPLVTLIAKNNLLTNASLPKSLLTKMANG 120

Query: 126 KN------LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            N      LK  NLSGNQL  FP Q+ ++  LKYLYLG N ++ V ++I K+  LHVLSL
Sbjct: 121 NNGGSSSTLKELNLSGNQLTHFPEQVTELRHLKYLYLGGNKISSVSKDIWKMQSLHVLSL 180

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
           GGN ++++P+  G L QL+AL+L DN +E LP SI+ LK                     
Sbjct: 181 GGNLISEVPEAVGSLNQLQALVLCDNLIEILPTSIARLK--------------------- 219

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELA 299
                  LKSLLLH N+LR LP +I+ LK L+ELSLRDNPLV+RFV DM  KPP+LLELA
Sbjct: 220 ------NLKSLLLHKNRLRHLPKDIVALKNLTELSLRDNPLVVRFVQDMALKPPTLLELA 273

Query: 300 SRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPL 359
            R +K          +P+ L +YL SA+ CVNP CKGVFFDNR+EHIKFVDFCGKYR+PL
Sbjct: 274 GRMVKASGQRPGPYDIPRTLGEYLNSANCCVNPNCKGVFFDNRVEHIKFVDFCGKYRVPL 333

Query: 360 LQYLCSSRCI------TNSPNVMYGDVKNEDMMKKVLLG 392
           LQYLCSS+CI          +V   +  +  MM+KVLLG
Sbjct: 334 LQYLCSSKCIEPEQPAARGTSVPAANASSGFMMRKVLLG 372


>gi|194890075|ref|XP_001977229.1| GG18917 [Drosophila erecta]
 gi|190648878|gb|EDV46156.1| GG18917 [Drosophila erecta]
          Length = 371

 Score =  342 bits (876), Expect = 3e-91,   Method: Compositional matrix adjust.
 Identities = 198/398 (49%), Positives = 245/398 (61%), Gaps = 46/398 (11%)

Query: 10  SSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLS 69
           +SDSSD+DS +    KTLDF   SLD  TL   +   P     K   +I+T+LL HN L 
Sbjct: 5   TSDSSDTDSREQ---KTLDFGRMSLDLVTLEDHLAS-PQKALLKSSGDIETMLLNHNRLV 60

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKD----MSNL 125
             P    +F NL+ LDLS+N IT LP A+   PL TLIA+NNLLT  SLPK     M+N 
Sbjct: 61  GLPRLLLQFNNLKILDLSSNAITTLPDAVCQLPLVTLIAKNNLLTNASLPKSLLTKMANT 120

Query: 126 K-----NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
                  LK  NLSGNQL  FP Q+ ++  LKYLYLG N ++ V ++I K+  LHVLSLG
Sbjct: 121 AAGSNSTLKELNLSGNQLTHFPEQVTELRHLKYLYLGGNKISGVSKDIWKMQSLHVLSLG 180

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           GN ++++P+  G L QL+AL+L DN +E LP SI+ LK                      
Sbjct: 181 GNLISEVPEAVGSLNQLQALVLCDNLIEILPTSIARLK---------------------- 218

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELAS 300
                 LKSLLLH N+LR LP +I+ LK L+ELSLRDNPLV+RFV DM  KPP+LLELA 
Sbjct: 219 -----NLKSLLLHKNRLRHLPKDIVALKNLTELSLRDNPLVVRFVQDMALKPPTLLELAG 273

Query: 301 RTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLL 360
           R +K          +P+ L +YL SA+ CVNP CKGVFFDNR+EHIKFVDFCGKYR+PLL
Sbjct: 274 RMVKASGQRPGPYDIPRTLAEYLNSANCCVNPNCKGVFFDNRVEHIKFVDFCGKYRVPLL 333

Query: 361 QYLCSSRCI------TNSPNVMYGDVKNEDMMKKVLLG 392
           QYLCSS+CI          +V      +  MM+KVLLG
Sbjct: 334 QYLCSSKCIEPEQPAARGSSVPAAIASSGFMMRKVLLG 371


>gi|189236516|ref|XP_975405.2| PREDICTED: similar to AGAP004458-PA [Tribolium castaneum]
 gi|270005319|gb|EFA01767.1| hypothetical protein TcasGA2_TC007366 [Tribolium castaneum]
          Length = 349

 Score =  341 bits (874), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 185/384 (48%), Positives = 250/384 (65%), Gaps = 43/384 (11%)

Query: 13  SSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFP 72
           SSDSD   T   K  DF+Y  LDS+ L   +  L   D  K+ E+I++++L+HN L+  P
Sbjct: 5   SSDSD---TNGNKVFDFAYLLLDSQQLEENLNEL-GKDCTKR-EDIESIILHHNQLTTLP 59

Query: 73  DNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFN 132
            N +KFTN++ LD+SNN +T LP     + L+TL+A+NN  + ESLPK  +   +L+  N
Sbjct: 60  KNLAKFTNVQVLDISNNGLTALPDVFEYWHLTTLVAKNNRFSNESLPKSFAESASLRELN 119

Query: 133 LSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFG 192
           LSGN  EQFP Q+ +   LKYLYLG N +  +P+ I KL  L +LS+GGN L ++P T G
Sbjct: 120 LSGNVFEQFPEQLFEFTNLKYLYLGGNKIKTIPKNIKKLNCLQILSMGGNQLVEVPSTLG 179

Query: 193 DLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLL 252
            L QL+AL+L DN +ESLP++I+NL  LKSL LH NKLRTLP E                
Sbjct: 180 QLKQLQALVLCDNLIESLPSNIANLHNLKSLQLHKNKLRTLPPE---------------- 223

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQ 312
                      II LK L+ELSLRDNPLV+RFVS++ +   SL EL++R +K+H++   +
Sbjct: 224 -----------IIALKNLTELSLRDNPLVVRFVSNIKHNTASLKELSARVIKLHQMRVEK 272

Query: 313 EHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCITNS 372
             +P +L+ YL+SAHHCVNP CKGVFF++R+EH+KFVDFCGKYR+PLLQYLCS++C+ + 
Sbjct: 273 GDIPASLLNYLDSAHHCVNPYCKGVFFNSRVEHVKFVDFCGKYRLPLLQYLCSTKCVEDG 332

Query: 373 ----PNVMYGDVKNEDMMKKVLLG 392
               P   Y       +MKKVLLG
Sbjct: 333 EELRPPRAY-------LMKKVLLG 349


>gi|194768228|ref|XP_001966215.1| GF19554 [Drosophila ananassae]
 gi|190623100|gb|EDV38624.1| GF19554 [Drosophila ananassae]
          Length = 375

 Score =  341 bits (874), Expect = 4e-91,   Method: Compositional matrix adjust.
 Identities = 198/402 (49%), Positives = 247/402 (61%), Gaps = 50/402 (12%)

Query: 10  SSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLS 69
           +SDSSD+DS +    KTLDF   SLD  TL   +   P     K   +I+T+LL HN L 
Sbjct: 5   TSDSSDTDSREQ---KTLDFGRMSLDLVTLEDHLSS-PQKGLLKASGDIETMLLNHNRLV 60

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM-----SN 124
             P    +F NL+ LDLS+N IT LP A+   PL TLIA+NNLLT  SLPK +     SN
Sbjct: 61  GLPRLLQQFANLKILDLSSNAITQLPDAVCQLPLVTLIAKNNLLTNGSLPKSLLSKQVSN 120

Query: 125 LKN------LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
                    LK  NLSGNQL  FP Q+ ++  LKYLYLG N ++ V ++I K+  LHVLS
Sbjct: 121 AGGTVGGSTLKELNLSGNQLTHFPEQVTELRQLKYLYLGGNKISTVSKDIWKMQSLHVLS 180

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           LGGN ++++P++ G L QL+AL+L DN +E LP SI+ LK                    
Sbjct: 181 LGGNLISEVPESVGSLNQLQALVLCDNLIEILPTSIARLK-------------------- 220

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLEL 298
                   LKSLLLH N+LR LP +I+ LK L+ELSLRDNPLV+RFV DM  KPP+LLEL
Sbjct: 221 -------NLKSLLLHKNRLRHLPKDIVALKNLTELSLRDNPLVVRFVQDMALKPPTLLEL 273

Query: 299 ASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIP 358
           A R +K          +P+ L +YL SA+ CVNP CKGVFFDNR+EHIKFVDFCGKYR+P
Sbjct: 274 AGRMVKASGQRPGPYDIPRTLAEYLNSANCCVNPNCKGVFFDNRVEHIKFVDFCGKYRVP 333

Query: 359 LLQYLCSSRCI-----TNSPNVMYGDVKNED---MMKKVLLG 392
           LLQYLCSS+CI           +  +V +     MM+KVLLG
Sbjct: 334 LLQYLCSSKCIEPEEPARGIAPLQANVSSASSGFMMRKVLLG 375


>gi|195130625|ref|XP_002009752.1| GI15063 [Drosophila mojavensis]
 gi|193908202|gb|EDW07069.1| GI15063 [Drosophila mojavensis]
          Length = 370

 Score =  340 bits (872), Expect = 8e-91,   Method: Compositional matrix adjust.
 Identities = 197/399 (49%), Positives = 248/399 (62%), Gaps = 49/399 (12%)

Query: 10  SSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLS 69
           +SDSSD+DS +    KT+DF   +LD  TL   +   P+    K   +I+T+LL HN L 
Sbjct: 5   TSDSSDTDSREQ---KTIDFGRMNLDVGTLEDHLSS-PHKALLKTSGDIETMLLNHNRLV 60

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPK-----DMSN 124
             P    +FTNL+ LDLS+N +T LP AI   PL TLIA+NNLLT  SLPK      M N
Sbjct: 61  ALPRVLQQFTNLKILDLSSNALTQLPDAICQLPLVTLIAKNNLLTNSSLPKSLLTKQMGN 120

Query: 125 LKN----LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
           +      LK  NLSGNQL  FP Q+ ++  LKYLYLG N ++ + ++I K+  LHVLSLG
Sbjct: 121 VHGGTSTLKELNLSGNQLIHFPEQVTELRQLKYLYLGGNKISSISKDIWKMQSLHVLSLG 180

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           GN + ++P+  G L QL+AL+L DN +E+LP SI+ LK                      
Sbjct: 181 GNLVNEVPEAVGSLSQLQALVLCDNLIENLPMSIARLK---------------------- 218

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELAS 300
                 LKSLLLH N+L+ LP +I+ LK L+ELSLRDNPLV+RFV DM  KPP+LLELA 
Sbjct: 219 -----NLKSLLLHKNRLKHLPKDIVALKNLTELSLRDNPLVVRFVQDMALKPPTLLELAG 273

Query: 301 RTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLL 360
           R +K        E +P+ LV YL SA+ CVNP CKGVFFDNR+EHIKFVDFCGKYR+PLL
Sbjct: 274 RIVKASGQRPGPEDVPRTLVDYLNSANCCVNPNCKGVFFDNRVEHIKFVDFCGKYRVPLL 333

Query: 361 QYLCSSRCITNSPNVMYGDVKNED-------MMKKVLLG 392
           QYLCSS+CI   P  +     +         MM+KVLLG
Sbjct: 334 QYLCSSKCI--EPEELSRASSSNASSASSGFMMRKVLLG 370


>gi|195402061|ref|XP_002059628.1| GJ14718 [Drosophila virilis]
 gi|194147335|gb|EDW63050.1| GJ14718 [Drosophila virilis]
          Length = 373

 Score =  338 bits (868), Expect = 2e-90,   Method: Compositional matrix adjust.
 Identities = 196/400 (49%), Positives = 248/400 (62%), Gaps = 48/400 (12%)

Query: 10  SSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLS 69
           +SDSSD+DS +    KT+DF   +LD  TL   +   P+    K   +I+TLLL HN L 
Sbjct: 5   TSDSSDTDSREQ---KTIDFGRMNLDVGTLEDHLSS-PHKGLLKTSGDIETLLLNHNRLV 60

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM--SNLKN 127
             P    +F+NL+ LDLS+N +T LP+AI   PL TLIA+NNLLT  SLPK +    L N
Sbjct: 61  LLPRMLQQFSNLKVLDLSSNALTQLPEAICQLPLVTLIAKNNLLTNSSLPKSLLSKQLAN 120

Query: 128 ----------LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
                     LK  NLSGNQL  FP Q+ ++  LKYLYLG N ++ + ++I K+  LHVL
Sbjct: 121 GHGAAVGTSTLKELNLSGNQLLHFPEQVTELRQLKYLYLGGNKISTISKDIWKMQSLHVL 180

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
           SLGGN + ++P+  G L QL+AL+L DN +E+LP SI+ LK                   
Sbjct: 181 SLGGNLVNEVPEAVGSLSQLQALVLCDNLIENLPMSIARLK------------------- 221

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLE 297
                    LKSLLLH N+L+ LP +I+ LK L+ELSLRDNPLV+RFV DM  KPP+LLE
Sbjct: 222 --------NLKSLLLHKNRLKHLPKDIVALKNLTELSLRDNPLVVRFVQDMALKPPTLLE 273

Query: 298 LASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRI 357
           LA R +K          LP+ L +YL SA+ CVNP CKGVFFDNR+EHIKFVDFCGKYR+
Sbjct: 274 LAGRIVKASGQRPGPGDLPRTLAEYLNSANCCVNPNCKGVFFDNRVEHIKFVDFCGKYRV 333

Query: 358 PLLQYLCSSRCIT-NSPNVMYGDVKNED----MMKKVLLG 392
           PLLQYLCSS+CI    P+       +      MM+KVLLG
Sbjct: 334 PLLQYLCSSKCIEPEEPSRASSSNASNASSGFMMRKVLLG 373


>gi|195566055|ref|XP_002106606.1| GD16031 [Drosophila simulans]
 gi|194203988|gb|EDX17564.1| GD16031 [Drosophila simulans]
          Length = 375

 Score =  338 bits (866), Expect = 3e-90,   Method: Compositional matrix adjust.
 Identities = 197/402 (49%), Positives = 244/402 (60%), Gaps = 50/402 (12%)

Query: 10  SSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLS 69
           +SDSSD+DS +    KTLDF   SLD  TL   +   P     K   +I+T+LL HN L 
Sbjct: 5   TSDSSDTDSREQ---KTLDFGRMSLDLVTLEDHLAS-PQKALLKSSGDIETMLLNHNRLV 60

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM-SNLKN- 127
             P    +F NL+ LDLS+N IT LP A+   PL TLIA+NNLLT  SLPK + + + N 
Sbjct: 61  GLPRLLLQFGNLKILDLSSNAITTLPDAVCQLPLVTLIAKNNLLTNASLPKSLLTKMANG 120

Query: 128 -----------LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
                      LK  NLSGNQL  FP Q+ ++  LKYLYLG N ++ V ++I K+  LHV
Sbjct: 121 NANATGGSNSTLKELNLSGNQLTHFPEQVTELRHLKYLYLGGNKISSVSKDIWKMQSLHV 180

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           LSLGGN ++++P+  G L QL+AL+L DN +E LP SI+ LK                  
Sbjct: 181 LSLGGNLISEVPEAVGSLNQLQALVLCDNLIEILPTSIARLK------------------ 222

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
                     LKSLLLH N+LR LP +I+ LK L+ELSLRDNPLV+RFV DM  KPP+LL
Sbjct: 223 ---------NLKSLLLHKNRLRHLPKDIVALKNLTELSLRDNPLVVRFVQDMALKPPTLL 273

Query: 297 ELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYR 356
           ELA R +K          +P+ L +YL SA+ CVNP CKGVFFDNR+EHIKFVDFCGKYR
Sbjct: 274 ELAGRMVKASGQRPGPYDIPRTLAEYLNSANCCVNPNCKGVFFDNRVEHIKFVDFCGKYR 333

Query: 357 IPLLQYLCSSRCITNSPNVMYGDVKNED------MMKKVLLG 392
           +PLLQYLCSS+CI        G            MM+KVLLG
Sbjct: 334 VPLLQYLCSSKCIEPEQPATRGSSVPAASASSGFMMRKVLLG 375


>gi|195166976|ref|XP_002024310.1| GL14883 [Drosophila persimilis]
 gi|194107683|gb|EDW29726.1| GL14883 [Drosophila persimilis]
          Length = 372

 Score =  337 bits (864), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 193/399 (48%), Positives = 241/399 (60%), Gaps = 47/399 (11%)

Query: 10  SSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLS 69
           +SDSSD+DS +    KT+DF   SLD  TL   +   P+    K   +I+T+LL HN L 
Sbjct: 5   TSDSSDTDSREQ---KTIDFGRMSLDLATLEDHLTS-PHKALLKSSGDIETMLLNHNRLV 60

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM------- 122
             P    +F NL+ LDLS+N IT LP A+   PL TLIA+NNLLT  SLPK +       
Sbjct: 61  GLPRVLQQFANLKVLDLSSNAITQLPDAVCQLPLVTLIAKNNLLTNCSLPKSLLAKQAGG 120

Query: 123 -SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
                 LK  NLSGNQL  FP Q+ ++  LKYLY+G N +  + ++I K+  LHVLSLGG
Sbjct: 121 GHGHSTLKELNLSGNQLTHFPEQVTELRHLKYLYVGGNKITAISKDIWKMQSLHVLSLGG 180

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N ++D+PD  G L  L+AL+L DN +E+LP SI+ LK                       
Sbjct: 181 NLISDVPDAVGSLSHLQALVLCDNLVENLPMSIARLK----------------------- 217

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASR 301
                LKSLLLH N+LR LP +I+ LK L+ELSLRDNPLV+RFV DM  KPP+LLELA R
Sbjct: 218 ----NLKSLLLHKNRLRHLPKDIVALKNLTELSLRDNPLVVRFVQDMALKPPTLLELAGR 273

Query: 302 TLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQ 361
            +K          +P+ L +YL SA+ CVNP CKGVFFDNR+EHIKFVDFCGKYR+PLLQ
Sbjct: 274 IVKASGQRPGPYDIPRTLAEYLNSANCCVNPNCKGVFFDNRVEHIKFVDFCGKYRVPLLQ 333

Query: 362 YLCSSRCITNSPNVMYGDVKNED--------MMKKVLLG 392
           YLCSS+CI +                     MM+KVLLG
Sbjct: 334 YLCSSKCIEHEEPARGSSASTSAASSANSGFMMRKVLLG 372


>gi|24641036|ref|NP_727428.1| CG32687, isoform A [Drosophila melanogaster]
 gi|442615803|ref|NP_001259412.1| CG32687, isoform B [Drosophila melanogaster]
 gi|21064705|gb|AAM29582.1| RH29237p [Drosophila melanogaster]
 gi|22832031|gb|AAF46596.2| CG32687, isoform A [Drosophila melanogaster]
 gi|220960204|gb|ACL92638.1| CG32687-PA [synthetic construct]
 gi|440216620|gb|AGB95255.1| CG32687, isoform B [Drosophila melanogaster]
          Length = 377

 Score =  337 bits (864), Expect = 6e-90,   Method: Compositional matrix adjust.
 Identities = 196/404 (48%), Positives = 241/404 (59%), Gaps = 52/404 (12%)

Query: 10  SSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLS 69
           +SDSSD+DS +    KTLDF   SLD  TL   +   P     K   +I+T+LL HN L 
Sbjct: 5   TSDSSDTDSREQ---KTLDFGRMSLDLVTLEDHLAS-PQKALLKSSGDIETMLLNHNRLV 60

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM------- 122
             P    +F NL+ LDLS+N IT LP A+   PL TLIA+NNLLT  SLPK +       
Sbjct: 61  GLPRLLLQFGNLKILDLSSNAITTLPDAVCQLPLVTLIAKNNLLTNASLPKSLLTKMANG 120

Query: 123 --------SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
                        LK  NLSGNQL  FP Q+ ++  LKYLYLG N ++ V ++I K+  L
Sbjct: 121 NGNGNATGGTNSTLKELNLSGNQLTHFPEQVTELRHLKYLYLGGNKISSVSKDIWKMQSL 180

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
           HVLSLGGN ++++P+  G L QL+AL+L DN +E LP SI+ LK                
Sbjct: 181 HVLSLGGNLISEVPEAVGSLNQLQALVLCDNLIEILPTSIARLK---------------- 224

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPS 294
                       LKSLLLH N+LR LP +I+ LK L+ELSLRDNPLV+RFV DM  KPP+
Sbjct: 225 -----------NLKSLLLHKNRLRHLPKDIVALKNLTELSLRDNPLVVRFVQDMALKPPT 273

Query: 295 LLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGK 354
           LLELA R +K          +P+ L +YL SA+ CVNP CKGVFFDNR+EHIKFVDFCGK
Sbjct: 274 LLELAGRMVKASGQRPGPYDIPRTLAEYLNSANCCVNPNCKGVFFDNRVEHIKFVDFCGK 333

Query: 355 YRIPLLQYLCSSRCITNSPNVMYGDVKNED------MMKKVLLG 392
           YR+PLLQYLCSS+CI        G            MM+KVLLG
Sbjct: 334 YRVPLLQYLCSSKCIEPEQPAARGSSVPAASASSGFMMRKVLLG 377


>gi|125981717|ref|XP_001354862.1| GA17074 [Drosophila pseudoobscura pseudoobscura]
 gi|54643174|gb|EAL31918.1| GA17074 [Drosophila pseudoobscura pseudoobscura]
          Length = 372

 Score =  335 bits (858), Expect = 3e-89,   Method: Compositional matrix adjust.
 Identities = 192/399 (48%), Positives = 241/399 (60%), Gaps = 47/399 (11%)

Query: 10  SSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLS 69
           +SDSSD+DS +    KT+DF   SLD  TL   +   P+    K   +I+T+LL HN L 
Sbjct: 5   TSDSSDTDSREQ---KTIDFGRMSLDLATLEDHLTS-PHKALLKSSGDIETMLLNHNRLV 60

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM------- 122
             P    +F NL+ LDLS+N IT LP A+   PL TLIA+NNLLT  SLPK +       
Sbjct: 61  GLPRVLQQFANLKVLDLSSNAITQLPDAVCQLPLVTLIAKNNLLTNCSLPKSLLAKQAGG 120

Query: 123 -SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
                 LK  NLSGNQL  FP Q+ ++  LKYLY+G N +  + ++I K+  LHVLSLGG
Sbjct: 121 GHGHSTLKELNLSGNQLTHFPEQVTELRHLKYLYVGGNKITGISKDIWKMQSLHVLSLGG 180

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N ++++PD  G L  L+AL+L DN +E+LP SI+ LK                       
Sbjct: 181 NLISEVPDAVGSLSLLQALVLCDNLVENLPMSIARLK----------------------- 217

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASR 301
                LKSLLLH N+LR LP +I+ LK L+ELSLRDNPLV+RFV DM  KPP+LLELA R
Sbjct: 218 ----NLKSLLLHKNRLRHLPKDIVALKNLTELSLRDNPLVVRFVQDMALKPPTLLELAGR 273

Query: 302 TLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQ 361
            +K          +P+ L +YL SA+ CVNP CKGVFFDNR+EHIKFVDFCGKYR+PLLQ
Sbjct: 274 IVKASGQRPGPYDIPRTLAEYLNSANCCVNPNCKGVFFDNRVEHIKFVDFCGKYRVPLLQ 333

Query: 362 YLCSSRCITNSPNVMYGDVKNED--------MMKKVLLG 392
           YLCSS+CI +                     MM+KVLLG
Sbjct: 334 YLCSSKCIEHEEPARGSSASTSAASSANSGFMMRKVLLG 372


>gi|157109146|ref|XP_001650545.1| internalin A, putative [Aedes aegypti]
 gi|108879119|gb|EAT43344.1| AAEL005221-PA [Aedes aegypti]
          Length = 357

 Score =  333 bits (853), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 201/390 (51%), Positives = 260/390 (66%), Gaps = 45/390 (11%)

Query: 10  SSDSSDSDSFKTVSIKTLDFSYSS---LDSETLATQIELLPNNDYNKKPENIDTLLLYHN 66
           +SDS DSDS +    KT DF +++   LD +       LL      K  E+I+TLLL HN
Sbjct: 6   TSDSCDSDSREQ---KTADFGHANKRHLDED-------LLRMCKTKKVAEDIETLLLNHN 55

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTAESLPKDM--S 123
           NL   P +  +F NLR LDLSNN +  +P  IT    L+TLIA+NNLL  +SLPK +  +
Sbjct: 56  NLLIVPASIGEFANLRVLDLSNNSLRQIPDEITQQCQLTTLIAKNNLLDDKSLPKTLRSA 115

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           +   LK  NLSGN+   FP Q+ ++ +LKYLYLG N L +V ++I KL  L +LSLGGN 
Sbjct: 116 HGGGLKELNLSGNRFTHFPEQVTELRSLKYLYLGGNQLTNVSKDIWKLHNLQLLSLGGNF 175

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           +T+IPDT G L  L AL+L DN +E+LP+SI+ L       +H                 
Sbjct: 176 ITEIPDTVGLLNNLHALVLCDNLIEALPSSIARL-------VH----------------- 211

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTL 303
              LKSLLLH N+L+ LP EIITLK L+ELSLRDNPLV+RFV DMT  PP+LLELA+R++
Sbjct: 212 ---LKSLLLHKNRLKHLPREIITLKNLTELSLRDNPLVVRFVKDMTLNPPTLLELAARSV 268

Query: 304 KVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
           KV  + +  E LP+ L+ YL++A+ CVNP CKGVFFDNR+EHIKFVDFCGKYRIPLLQYL
Sbjct: 269 KVAALPFGPEDLPRTLIDYLQTANCCVNPNCKGVFFDNRVEHIKFVDFCGKYRIPLLQYL 328

Query: 364 CSSRCITNSPNV-MYGDVKNEDMMKKVLLG 392
           CSS+CI+++    +YG+  +  MM+KVLLG
Sbjct: 329 CSSKCISDTKTAEVYGE-PSSSMMRKVLLG 357


>gi|195042980|ref|XP_001991528.1| GH12711 [Drosophila grimshawi]
 gi|193901286|gb|EDW00153.1| GH12711 [Drosophila grimshawi]
          Length = 368

 Score =  331 bits (849), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 191/397 (48%), Positives = 241/397 (60%), Gaps = 45/397 (11%)

Query: 8   SSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNN 67
           +S S  +DS   KT+     DF   +LD  TL   +   P     K   +I+TLLL HN 
Sbjct: 5   TSDSSDTDSRELKTI-----DFGRMNLDVGTLEDHLS-SPQKGLLKSSGDIETLLLNHNR 58

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM----- 122
           L   P     F NL+ LDLS+N +T LP AI   PL TLIA+NNLLT+ SLPK +     
Sbjct: 59  LVALPRMLQLFNNLKILDLSSNALTQLPDAICQLPLVTLIAKNNLLTSSSLPKSLLTKQT 118

Query: 123 --SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
             +    LK  NLSGNQL  FP Q+ ++  LKYLYLG N ++ + ++I K+  LHVLSLG
Sbjct: 119 TGNGTSTLKELNLSGNQLIHFPEQVTELRQLKYLYLGGNKISIISKDIWKMQSLHVLSLG 178

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           GN + ++P+  G L QL+AL+L DN +E LP SI+ LK LKSLLLH N+L+ LP      
Sbjct: 179 GNLVNEVPEAVGSLSQLQALVLCDNHIEHLPTSIARLKNLKSLLLHKNRLKHLP------ 232

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELAS 300
                                 +I+ LK L+ELSLRDNPLV+RFV DM  KPP+LLELA 
Sbjct: 233 ---------------------KDIVALKNLTELSLRDNPLVVRFVQDMALKPPTLLELAG 271

Query: 301 RTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLL 360
           R +K          LP+ L +YL SA+ CVNP CKGVFFDNR+EHIKFVDFCGKYR+PLL
Sbjct: 272 RIVKASGQRPGPNDLPRTLAEYLNSANCCVNPNCKGVFFDNRVEHIKFVDFCGKYRVPLL 331

Query: 361 QYLCSSRCI--TNSPNVMYGDVKNED---MMKKVLLG 392
           QYLCSS+CI   ++P+       +     MM+KVLLG
Sbjct: 332 QYLCSSKCIEPEDAPSRASCSNASASSGFMMRKVLLG 368


>gi|321461565|gb|EFX72596.1| hypothetical protein DAPPUDRAFT_308174 [Daphnia pulex]
          Length = 370

 Score =  323 bits (829), Expect = 7e-86,   Method: Compositional matrix adjust.
 Identities = 171/374 (45%), Positives = 246/374 (65%), Gaps = 33/374 (8%)

Query: 25  KTLDFSYSSLDSETLATQIE--LLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           + LDFSY+ ++SE+L+  +E  +  +  + K+ +  ++++L HN L+  PD+ + F N++
Sbjct: 24  QCLDFSYAMINSESLSHNLEAIICESGSHLKRADYYESMILQHNRLNTLPDSVAFFVNIK 83

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
            L+LS N +T +P AI     L++LIA+NN L  + +PK++   K L+  N SGN L +F
Sbjct: 84  LLNLSGNNLTFIPDAILMLKNLTSLIAKNNRLEDDGIPKNLGICKTLREVNFSGNCLTRF 143

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P Q+L++  LK+LY+G N ++ +P  I +L +L VL LGGN LT+IP   G L +L+AL+
Sbjct: 144 PEQLLELDGLKFLYVGGNQISMIPNTIGRLQRLKVLYLGGNCLTEIPAEVGQLARLQALV 203

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           LS+NQLE+LP++I  LK L++LLLH N+L TLP                           
Sbjct: 204 LSENQLENLPSTIVQLKKLRTLLLHKNQLTTLP--------------------------- 236

Query: 262 TEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQ 321
            +I+ LK L ELSLRDNPLV+RFV D+TY PP+LLELA R +K + + Y+   +PQ+L  
Sbjct: 237 PQIVALKELMELSLRDNPLVVRFVRDLTYNPPTLLELAGRVIKSNCVPYNTWEIPQHLAA 296

Query: 322 YLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCITNSPNVMYGDVK 381
           YL SAH CVNPKC+GV+FD+R+EH+KFVDFCGKYRIPLLQYLCS  C  N  +V    + 
Sbjct: 297 YLGSAHQCVNPKCQGVYFDSRVEHVKFVDFCGKYRIPLLQYLCSPNCTKNPVSVECCPLD 356

Query: 382 NE---DMMKKVLLG 392
           ++     +KKVLLG
Sbjct: 357 SDSDSGRLKKVLLG 370


>gi|289741781|gb|ADD19638.1| leucine-rich repeat protein [Glossina morsitans morsitans]
          Length = 361

 Score =  320 bits (821), Expect = 5e-85,   Method: Compositional matrix adjust.
 Identities = 187/399 (46%), Positives = 246/399 (61%), Gaps = 58/399 (14%)

Query: 10  SSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYN---KKPENIDTLLLYHN 66
           +SDSSD+DS +    KTLD+   +L    L   +    ++D     K  ++I+ LLL HN
Sbjct: 5   TSDSSDTDSREQ---KTLDYGRMNLIDINLEDDL----HSDAKISIKSIKDIEILLLNHN 57

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLK 126
            L+  P     F +LR LDLS+N +  LP+ I   PL TL+A+NN LT ESLPK    +K
Sbjct: 58  RLTRLPQTLRNFLSLRVLDLSSNCLRELPEIIGQLPLITLVAKNNQLTNESLPKSFI-IK 116

Query: 127 N----LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
           N    LK  NLSGN L  FP Q+ ++  L+YLY+G N ++ + ++I ++  L VLS+GGN
Sbjct: 117 NQNSSLKELNLSGNMLTHFPEQVTELKNLRYLYVGGNQISSISKDIWRMQSLQVLSVGGN 176

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            LTD+PD+ G L QL+AL+L DN +E+LP SI+ LK LKSLLLH N+L+ LP        
Sbjct: 177 LLTDVPDSVGLLSQLQALVLCDNLIENLPTSIARLKNLKSLLLHKNRLKHLP-------- 228

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRT 302
                               +I+ LK L+ELSLRDNPLV+RFV DM+  PP+L+ELA+R 
Sbjct: 229 -------------------KDIVALKNLAELSLRDNPLVVRFVQDMSLNPPTLMELAARI 269

Query: 303 LKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQY 362
           +K   +      LPQ ++ YL  A+ CVNP+CKGVFFDNR+EHIKFVDFCGKYR+PLLQY
Sbjct: 270 VKTAGVSVEPGDLPQTILDYLSCANCCVNPQCKGVFFDNRVEHIKFVDFCGKYRVPLLQY 329

Query: 363 LCSSRCI---------TNSPNVMYGDVKNEDMMKKVLLG 392
           LCSS+CI         TN     Y       MM+KVLLG
Sbjct: 330 LCSSKCIEHEMPTRPPTNGATRGY-------MMRKVLLG 361


>gi|195350694|ref|XP_002041873.1| GM11308 [Drosophila sechellia]
 gi|194123678|gb|EDW45721.1| GM11308 [Drosophila sechellia]
          Length = 375

 Score =  318 bits (816), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 195/402 (48%), Positives = 243/402 (60%), Gaps = 50/402 (12%)

Query: 10  SSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLS 69
           +SDSSD+DS +    KTLDF   SLD  TL   +   P     K   +I+T+LL HN L 
Sbjct: 5   TSDSSDTDSREQ---KTLDFGRMSLDLVTLEDHLAS-PQKALLKSSGDIETMLLNHNRLV 60

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM-SNLKN- 127
             P    +F NL+ LDLS+N IT LP A+   PL TLIA+NNLLT  SLPK + + + N 
Sbjct: 61  GLPRLLLQFGNLKILDLSSNAITTLPDAVCQLPLVTLIAKNNLLTNASLPKSLLTKMANG 120

Query: 128 -----------LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
                      LK  NLSGNQL  FP Q+ ++  LKYLYLG N ++ V ++I K+  LHV
Sbjct: 121 NANATGGSNSTLKELNLSGNQLTHFPEQVTELRHLKYLYLGGNKISSVSKDIWKMQSLHV 180

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           LSLGGN ++++P+  G L QL+AL+L DN +E LP SI+                     
Sbjct: 181 LSLGGNLISEVPEAVGSLNQLQALVLCDNLIEILPTSIAL-------------------- 220

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
                   + LKSLLLH N+LR LP +I+ LK L+ELSLRDNPLV+RFV DM  KPP+LL
Sbjct: 221 -------LKNLKSLLLHKNRLRHLPKDIVALKNLTELSLRDNPLVVRFVQDMALKPPTLL 273

Query: 297 ELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYR 356
           ELA R +K          +P+ L +YL SA+ CVNP CKGVFFDNR+EHIKFVDFCGKYR
Sbjct: 274 ELAGRMVKASGQRPGPYDIPRTLAEYLNSANCCVNPNCKGVFFDNRVEHIKFVDFCGKYR 333

Query: 357 IPLLQYLCSSRCITNSPNVMYGDVKNED------MMKKVLLG 392
           +PLLQYLCSS+CI        G            MM+KVLLG
Sbjct: 334 VPLLQYLCSSKCIEPEQPATRGSSVPAASASSGFMMRKVLLG 375


>gi|405960502|gb|EKC26423.1| Leucine-rich repeat-containing protein 58 [Crassostrea gigas]
          Length = 356

 Score =  293 bits (750), Expect = 1e-76,   Method: Compositional matrix adjust.
 Identities = 160/349 (45%), Positives = 218/349 (62%), Gaps = 39/349 (11%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQA-ITNFPLSTLIARNNL 112
           + + I +L+L+HN     P + S F NL +LDLSNN +T LP+  IT   L  L+ ++N 
Sbjct: 37  RSKEIRSLILHHNEFLLIPKSISLFGNLLTLDLSNNHLTDLPKELITLRNLRKLVVKSNG 96

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  S+PKD   L +L+  N SGN  E FP Q  ++  LK LYLG N ++ +P  I  L 
Sbjct: 97  LTCSSIPKDFGLLSSLEELNFSGNMFEVFPPQFTELSRLKCLYLGGNCISEMPNSIKNLQ 156

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           +L VL LGGN LT++P   G LY L +L+L DNQ++S+P ++ +L+ L+SL LHNN++ T
Sbjct: 157 RLEVLYLGGNRLTEVPAEIGQLYYLISLVLCDNQIQSIPPTLIHLRNLQSLSLHNNQIST 216

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKP 292
           LP EI+ L                             LSELSLR+NPLV +FV DMTY+P
Sbjct: 217 LPPEIVRLN----------------------------LSELSLRNNPLVNKFVQDMTYEP 248

Query: 293 PSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFC 352
           P+LLEL+ R +K+ ++ YS+E LP NL +YL SA  CVN KCKGV+F +R+EH+KFVDFC
Sbjct: 249 PTLLELSGRVVKIEKVKYSKEDLPSNLRKYLSSAQRCVNSKCKGVYFTSRVEHVKFVDFC 308

Query: 353 GKYRIPLLQYLCSSRCITNSPNVMYGDVKNED---------MMKKVLLG 392
           GKYR+PLLQYLCS +C T +P V +     E           +++VLLG
Sbjct: 309 GKYRLPLLQYLCSPQCRT-TPAVYHSSSDTETDEDEAMANARLRRVLLG 356


>gi|443724415|gb|ELU12432.1| hypothetical protein CAPTEDRAFT_150790 [Capitella teleta]
          Length = 346

 Score =  291 bits (745), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 169/374 (45%), Positives = 222/374 (59%), Gaps = 48/374 (12%)

Query: 28  DFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLS 87
           D SYS LD+          P+    +  E I +L L HN +S  P + S F NL +LDLS
Sbjct: 12  DLSYSDLDT---------FPDFLVQRADE-ILSLQLDHNLISSLPRSISTFVNLINLDLS 61

Query: 88  NNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQIL 146
           NN + ++   I     L TL  RNN L  ESLPKD   L++LKV N SGN+   FP+Q+ 
Sbjct: 62  NNNLRYISPCIVQLSSLRTLYLRNNELDNESLPKDFGILESLKVVNFSGNRFTDFPVQVT 121

Query: 147 DIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQ 206
           ++P L  L+LG N +  +P+EI  L  L VL +GGN LT++PD  G L  L++L+L DN+
Sbjct: 122 ELPQLHVLHLGANKIKSIPKEIGSLQSLEVLYMGGNRLTEVPDEVGHLLNLKSLVLCDNR 181

Query: 207 LESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIIT 266
           + SLP +I NL+ L+SL LHNN + TLP ++I L                          
Sbjct: 182 INSLPGTIPNLQNLRSLSLHNNHISTLPPKLIDLD------------------------- 216

Query: 267 LKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESA 326
              L ELSLR+NPLV+RFV DM Y+ PSL EL+ R +K+  I Y+ E LP  L+ YL+S 
Sbjct: 217 ---LIELSLRNNPLVLRFVQDMVYEAPSLKELSGRVIKIKNIQYTPEDLPATLIHYLDSG 273

Query: 327 HHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCITNSPNVMYGDVKN---- 382
             CVNPKCKGVFF +++EH+KFVDFCGKYR+PLLQYLCS RC T +P V           
Sbjct: 274 SSCVNPKCKGVFFASKVEHVKFVDFCGKYRLPLLQYLCSPRC-TTAPLVACSSDSESDDD 332

Query: 383 ----EDMMKKVLLG 392
               E+ M++VLLG
Sbjct: 333 LPIVENKMRRVLLG 346


>gi|291231499|ref|XP_002735702.1| PREDICTED: ras suppressor protein 1-like [Saccoglossus kowalevskii]
          Length = 349

 Score =  290 bits (743), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 150/330 (45%), Positives = 211/330 (63%), Gaps = 28/330 (8%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           Q+E  P++   K+  N+ +++L HN ++  P     F +L  LD+S+NR+ ++   I   
Sbjct: 18  QLEEFPDHLSEKRSSNVRSMVLSHNRITVLPRVIGSFESLIELDMSSNRLKYISDEIVRL 77

Query: 102 P-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
           P L  L+A+NNLL  ESLPK++     L+V N SGN L  FP+++ ++ TLK +YLG N 
Sbjct: 78  PKLKVLVAKNNLLDLESLPKNIGMCPQLEVVNFSGNLLVDFPVELTELQTLKCVYLGGNR 137

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           +  +P E++KL +L +L LGGN LT+IP   G L  L +L+L DN+++ LP+    L  L
Sbjct: 138 IRTLPPELHKLQRLEILYLGGNQLTEIPAEIGSLNSLISLVLCDNKIQQLPSDFVKLTNL 197

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +SL LHNN L TLPT                           +I+ LK L+ELSLR NPL
Sbjct: 198 ESLSLHNNSLTTLPT---------------------------QIVKLKNLAELSLRGNPL 230

Query: 281 VIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFD 340
           V+RF  D+TY+PPSLLEL+ R +K + + Y+   LP++LV YL SA  CVNP CKGV+F+
Sbjct: 231 VMRFCRDLTYQPPSLLELSGRAIKSNNVPYNNADLPRDLVHYLGSACKCVNPNCKGVYFE 290

Query: 341 NRIEHIKFVDFCGKYRIPLLQYLCSSRCIT 370
           +R+EH+KFVDFCGKYR+PLLQYLCS +C T
Sbjct: 291 SRVEHVKFVDFCGKYRLPLLQYLCSPQCAT 320


>gi|225718392|gb|ACO15042.1| Leucine-rich repeat-containing protein 58 [Caligus clemensi]
          Length = 370

 Score =  280 bits (716), Expect = 9e-73,   Method: Compositional matrix adjust.
 Identities = 159/380 (41%), Positives = 232/380 (61%), Gaps = 32/380 (8%)

Query: 15  DSDSFKTVSIKTLDFSYSSLDSETLATQIE-LLPNNDYNKKPENIDTLLLYHNNLSFFPD 73
           D D F + S   LD SY  L +  L+  +E   P+ D +  P+ ++ L +YHN+L + P+
Sbjct: 21  DPDEFSSSS--KLDLSYRRLHAHALSKCLEEQFPDEDPDS-PKLVNKLFVYHNDLEYIPE 77

Query: 74  NASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFN 132
              K TNL  +D+SNN +  +P +IT+   L++LI +NN LT  S PK+  + +NL+  N
Sbjct: 78  ITFKLTNLSVIDVSNNYLRDIPNSITSLVNLTSLILKNNHLTIHSFPKNFKDSRNLRDLN 137

Query: 133 LSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFG 192
           LS N+LE+ P QI ++ +L+ L                       SLGGN + +I    G
Sbjct: 138 LSANRLEEIPHQIYELGSLRNL-----------------------SLGGNDIKEISKDLG 174

Query: 193 DLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLL 252
           DL++L  L +  N L  LP  IS L+ L +L+L +N+L +LP  I +L     KL+SL L
Sbjct: 175 DLHRLRYLYMGGNHLSELPREISKLRHLHALILCSNQLSSLPDGICSLY----KLESLQL 230

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQ 312
           H+NKL TLP  +I LK L ELSLRDNPL+ RFV +M Y+P SLLEL++R ++   I Y  
Sbjct: 231 HSNKLTTLPIGLIKLKGLKELSLRDNPLINRFVDEMDYQPSSLLELSARIVRTAGIQYRL 290

Query: 313 EHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCITNS 372
             LP  L+ YL++ + C+NP C+GV+F++R+EH+KFVDFCGKY++PL+QYLCSS C   +
Sbjct: 291 RDLPGCLIDYLDTYNCCLNPSCQGVYFESRVEHVKFVDFCGKYKVPLMQYLCSSSCTVTN 350

Query: 373 PNVMYGDVKNEDMMKKVLLG 392
           P +       E  M+++LLG
Sbjct: 351 PTLPSNLTIQEKKMRRILLG 370


>gi|156357640|ref|XP_001624323.1| predicted protein [Nematostella vectensis]
 gi|156211093|gb|EDO32223.1| predicted protein [Nematostella vectensis]
          Length = 358

 Score =  278 bits (712), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 164/365 (44%), Positives = 217/365 (59%), Gaps = 43/365 (11%)

Query: 42  QIELLPNND--YNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
            +E LP+N   ++  P  + +L+L  N +S  PD+ S F NL  LD+S+N + ++   I+
Sbjct: 23  HLEALPDNGHVFSFNPLKVTSLILQGNIISVLPDSISNFKNLVHLDVSSNGLAYISARIS 82

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L T I RNN L  + LPK+  +L  L+  NLSGN+LE F   I  +  LK L LG 
Sbjct: 83  ELDKLLTFIGRNNNL--DELPKEFGSLAKLEKLNLSGNRLESFGPSIFRLTQLKVLLLGG 140

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N +N+VP +I K+ +L +L LGGNSL  IP   G L  L AL L DN+LES+P++++ L 
Sbjct: 141 NKINNVPPQIYKMKRLEILYLGGNSLLRIPPEVGQLRTLRALYLCDNKLESIPSTLTKLS 200

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+SL LHNN+L TLP                            EI+ LK L ELSLRDN
Sbjct: 201 RLRSLSLHNNRLTTLP---------------------------VEIVKLKNLEELSLRDN 233

Query: 279 PLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVF 338
           PLV+RFV DM +KPPSLLEL+ R +K + + YS+E LP  L+ YL SA  CVNP CKGV+
Sbjct: 234 PLVVRFVRDMAFKPPSLLELSGRCIKNNSVRYSKEDLPPQLLSYLNSARRCVNPCCKGVY 293

Query: 339 FDNRIEHIKFVDFCGKYRIPLLQYLCSSR-----------CITNSPNVMYGDVKNEDMMK 387
           FD R+ +++FVDFCGKYR+PL QYLCS             C   + +    +V  ED MK
Sbjct: 294 FDARVRNVRFVDFCGKYRLPLEQYLCSPHENYRPDDGSLSCGFTTSSDEEENVVPEDKMK 353

Query: 388 KVLLG 392
           KVLLG
Sbjct: 354 KVLLG 358


>gi|260828542|ref|XP_002609222.1| hypothetical protein BRAFLDRAFT_125970 [Branchiostoma floridae]
 gi|229294577|gb|EEN65232.1| hypothetical protein BRAFLDRAFT_125970 [Branchiostoma floridae]
          Length = 403

 Score =  276 bits (705), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 161/378 (42%), Positives = 219/378 (57%), Gaps = 54/378 (14%)

Query: 60  TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESL 118
           TLLL HN ++  P   S+F +L+ LD S+N ++++ + I   P L TLI +NN L   +L
Sbjct: 35  TLLLTHNRIAILPRAISQFQSLQVLDFSSNHLSYISEEIVQLPKLRTLIVKNNRLDESAL 94

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           PK++    +L+V NLSGN    FP Q   +  LK LYLG N +  +P EI  +  L +L 
Sbjct: 95  PKNLELAPSLEVLNLSGNLFTDFPTQFTQMDKLKALYLGGNRIRTLPSEIENMQGLELLY 154

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           LGGN LT +P     L  L  L+L DN+L+ LP  +S ++ L+SL LHNN L TLPTE+I
Sbjct: 155 LGGNYLTSVPVEVSTLSNLSCLVLCDNRLQHLPKELSRMRSLRSLSLHNNMLTTLPTEMI 214

Query: 239 TLKCLSE-------------------------------------KLKSLLLHNNKLRTLP 261
            L+ +                                       KL+S+   NN   TLP
Sbjct: 215 KLRSVYTYNNMAATLPTEMIKLRNDQTQVGLHNNMLTTLPTEMIKLRSVYTCNNMAATLP 274

Query: 262 TEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQ 321
           TE+I L+ L ELSLR NPLV+RFV D+TY PPS+LELA+R +K   + YS ++LP  LVQ
Sbjct: 275 TEMIKLRNLQELSLRGNPLVVRFVRDLTYDPPSMLELAARVVKNQGVTYSPDNLPSTLVQ 334

Query: 322 YLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCITNSPNVMYGDVK 381
           YL++A  C       V+F++R +++KFVDFCGKYR+PLLQYLCS  C     ++ Y D +
Sbjct: 335 YLDAA--C-------VYFESRFKNVKFVDFCGKYRLPLLQYLCSPNCSVPGQDLAYSDSE 385

Query: 382 NED-------MMKKVLLG 392
           +ED        MKKVLLG
Sbjct: 386 SEDEHNVPANKMKKVLLG 403



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 45/130 (34%), Positives = 65/130 (50%), Gaps = 8/130 (6%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           N+  L+L  N L   P   S+  +LRSL L NN +T LP  +    L ++   NN+  A 
Sbjct: 172 NLSCLVLCDNRLQHLPKELSRMRSLRSLSLHNNMLTTLPTEM--IKLRSVYTYNNM--AA 227

Query: 117 SLPKDMSNLKNLKV-FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           +LP +M  L+N +    L  N L   P +++    L+ +Y  NN    +P E+ KL  L 
Sbjct: 228 TLPTEMIKLRNDQTQVGLHNNMLTTLPTEMIK---LRSVYTCNNMAATLPTEMIKLRNLQ 284

Query: 176 VLSLGGNSLT 185
            LSL GN L 
Sbjct: 285 ELSLRGNPLV 294


>gi|71993778|ref|NP_001022864.1| Protein Y42G9A.3, isoform a [Caenorhabditis elegans]
 gi|351063109|emb|CCD71152.1| Protein Y42G9A.3, isoform a [Caenorhabditis elegans]
          Length = 375

 Score =  259 bits (663), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 158/354 (44%), Positives = 214/354 (60%), Gaps = 40/354 (11%)

Query: 47  PNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LST 105
           P  DY+  P+N+  L L HN+        + F N+  LD+S N ++ LP+ I     L+T
Sbjct: 54  PEEDYD--PQNVKKLDLTHNSFVIL-RGLTTFNNVSVLDVSFNSLSALPEDIGTLSSLTT 110

Query: 106 LIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
           LIARNNLL  E LPK +  L+NL+   LSGN+LE  P  IL +  LK L+LG N ++  P
Sbjct: 111 LIARNNLL--EHLPKGLQLLENLEHLYLSGNRLEYVPPVILTMRKLKTLHLGGNYIDSCP 168

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             I+ L  L VL LGGN L +IP + G L +LE L L DN LE++P+++ +L  L++L L
Sbjct: 169 SNISVLTLLRVLYLGGNRLREIPASIGCLDELENLGLCDNILETIPSTLGDLHYLETLSL 228

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFV 285
           HNN+LRTLPT                           +I+ L+ L +LSLR+NPLV  FV
Sbjct: 229 HNNRLRTLPT---------------------------DILNLRRLQQLSLRNNPLVHSFV 261

Query: 286 SDMTYKPPSLLELASRTLK--VHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRI 343
            +M   PPSL EL+ RT++   H++    E LP +LV YL SA  CVNP+C+GV+FD R+
Sbjct: 262 HNMDLAPPSLKELSGRTVRQNYHKVPNLDEILPSDLVAYLGSACQCVNPECQGVYFDARV 321

Query: 344 EHIKFVDFCGKYRIPLLQYLCSSRCITNSPNVMYGDVKNED-----MMKKVLLG 392
           EHIKFVDFCGKYR+PL+Q+LCS RC    P+V Y      +     +M++VLLG
Sbjct: 322 EHIKFVDFCGKYRVPLMQFLCSPRCSAGVPSVDYDTSSESEEEIEPIMRRVLLG 375


>gi|148233092|ref|NP_001082428.1| leucine-rich repeat-containing protein 58 [Xenopus laevis]
 gi|123899008|sp|Q32NT4.1|LRC58_XENLA RecName: Full=Leucine-rich repeat-containing protein 58
 gi|80476302|gb|AAI08490.1| LOC398462 protein [Xenopus laevis]
          Length = 350

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 152/347 (43%), Positives = 205/347 (59%), Gaps = 36/347 (10%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI-TNFPLSTLIARNNL 112
           K +++  +LL HN L   P   + F +L  LD+SNN + ++ + I     L TL+A+NN 
Sbjct: 32  KRKDVQQILLPHNRLVVLPPLVASFIHLHLLDISNNNMVYIGEEILGLTKLKTLLAKNNR 91

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L   S PK+M  ++ L+V NLSGN+ E+ P Q L IPTLK L LG N L  +P EI  L 
Sbjct: 92  LDEFSFPKEMGGMR-LEVLNLSGNRFEEIPDQFLQIPTLKSLSLGGNRLKSIPAEIENLI 150

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L LGGN ++ IP    +L  L  L+L DN+++S+P  ++ +  L+SL LHNN L  
Sbjct: 151 SLEFLYLGGNFISSIPSELANLPYLSYLVLCDNRIQSIPPQLAQVHSLRSLSLHNNLLTY 210

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKP 292
           LP EI++           L+H                L ELSLR NPLV+RFV D+TY P
Sbjct: 211 LPREILS-----------LVH----------------LHELSLRGNPLVVRFVRDLTYTP 243

Query: 293 PSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFC 352
           P+LLELA RT+K H I Y    LP+NL++YL+ A  C NPKC GV+FD  +  IKFVDFC
Sbjct: 244 PTLLELAGRTIKSHGIPYCPWELPENLLRYLDLASKCPNPKCSGVYFDCCVRQIKFVDFC 303

Query: 353 GKYRIPLLQYLCSSRCITNSPNVMYGDVKNED-------MMKKVLLG 392
           GKYR+PL+ YLCS  C +   +  + +  +ED        M+KVLLG
Sbjct: 304 GKYRLPLMHYLCSPECSSPCGSTSHSESDSEDEVNVAARRMQKVLLG 350


>gi|312376131|gb|EFR23314.1| hypothetical protein AND_13123 [Anopheles darlingi]
          Length = 334

 Score =  258 bits (659), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 162/333 (48%), Positives = 212/333 (63%), Gaps = 42/333 (12%)

Query: 10  SSDSSDSDSFKTVSIKTLDFSYSS---LDSETLATQIELLPNNDYNKKPENIDTLLLYHN 66
           +SDS DSDS +    KT+D  +S+   LD +       L+  +   K  E+I+T+LL HN
Sbjct: 6   TSDSCDSDSREQ---KTVDLGHSNKRHLDDD-------LMRVSKSKKLAEDIETVLLNHN 55

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM--SN 124
            L   P + + FTNLR LDLSNN++  LP  IT   L+TLI +NNLLT +SLPK +  + 
Sbjct: 56  KLVRVPSSLADFTNLRVLDLSNNQLEELPDIITQCQLTTLIVKNNLLTDKSLPKSLLAAA 115

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
              L+  NLSGN+ E FP QI+++ +LKYLYLG N + +VP++I KL +L +LSLGGN +
Sbjct: 116 GNGLRELNLSGNRFEHFPEQIIELRSLKYLYLGGNQITNVPKDIWKLQQLQLLSLGGNLI 175

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           ++IP+T G L  L AL+L DN LE LPASI+ L  LKSLLLH N+LR LP E        
Sbjct: 176 SEIPETVGLLNHLHALVLCDNLLEVLPASIARLVNLKSLLLHKNQLRHLPRE-------- 227

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLK 304
                              IITL+ L+ELSLRDNPLV+RFV DMT  PPSLLELA RT+K
Sbjct: 228 -------------------IITLRNLTELSLRDNPLVVRFVKDMTLNPPSLLELAGRTVK 268

Query: 305 VHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGV 337
              I Y  E LP+ L++YL++A+ CVNP CK +
Sbjct: 269 TCAIRYGPEDLPRMLIEYLQTANCCVNPNCKAL 301


>gi|268575514|ref|XP_002642736.1| Hypothetical protein CBG21115 [Caenorhabditis briggsae]
          Length = 373

 Score =  258 bits (658), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 151/344 (43%), Positives = 207/344 (60%), Gaps = 36/344 (10%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLL 113
           P+NI  L L HN+          F+N+  LD+S N ++ LP+ I     L+TLIARNNLL
Sbjct: 60  PQNIRKLDLTHNSFVVL-RGLQTFSNVSFLDVSFNSLSALPEEIGTLRSLTTLIARNNLL 118

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
             E LPK M  L+N++   LSGN+LE FP  +L +  LK L+LG N ++  P  I+ L  
Sbjct: 119 --EHLPKGMQLLENMEHLYLSGNRLEYFPPVVLTLRKLKTLHLGGNYIDSCPSNISVLTS 176

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L VL  GGN L +IP + G L  LE L L DN LE++P+++ +L  L++L LHN      
Sbjct: 177 LTVLYFGGNRLREIPASIGTLENLENLGLCDNILETIPSTLGDLNWLETLSLHN------ 230

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPP 293
                                NKLRTLPT+I+ L+ L +LSLR+NPLV  FV +M   PP
Sbjct: 231 ---------------------NKLRTLPTDILNLRRLQQLSLRNNPLVHSFVHNMDLCPP 269

Query: 294 SLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCG 353
           SL EL  R ++ +      E +P ++++YL SA  CVNP+CKGV+FD R+EH+KFVDFCG
Sbjct: 270 SLKELTGRIVRQNMTPEMVEFIPTDIIEYLNSACQCVNPECKGVYFDARVEHVKFVDFCG 329

Query: 354 KYRIPLLQYLCSSRCITNSPNVMYGDVKNED-----MMKKVLLG 392
           KYR+PL+Q+LCS+RC    P+V Y      +     +M++VLLG
Sbjct: 330 KYRVPLMQFLCSARCSAGIPSVPYDTSSESEEEIEPIMRRVLLG 373


>gi|308499138|ref|XP_003111755.1| hypothetical protein CRE_03127 [Caenorhabditis remanei]
 gi|308239664|gb|EFO83616.1| hypothetical protein CRE_03127 [Caenorhabditis remanei]
          Length = 379

 Score =  257 bits (656), Expect = 9e-66,   Method: Compositional matrix adjust.
 Identities = 159/354 (44%), Positives = 211/354 (59%), Gaps = 40/354 (11%)

Query: 47  PNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLST 105
           P  +Y+  P NI  L L  N+          FTN+  LD+S N ++ LP+ I +   L+T
Sbjct: 58  PEEEYD--PLNIKKLDLTQNSFVVI-RGLRTFTNVSMLDVSFNSLSSLPEEIGSLTSLTT 114

Query: 106 LIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
           LIARNNLL  E LPK M  L+N++   LSGN+LE  P  IL +  LK L+LG N ++  P
Sbjct: 115 LIARNNLL--EHLPKGMQLLQNMEHLYLSGNRLEYVPPVILTMRKLKTLHLGGNYIDSCP 172

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             I+ L  L VL  GGN L +IP + G L QLE L L DN LE++P+++ +L  L++L L
Sbjct: 173 SNISVLASLTVLYFGGNRLREIPASIGCLDQLENLGLCDNILETIPSTLGDLHYLETLSL 232

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFV 285
           HNNKLRTLPT                           +I+ L+ L +LSLR+NPLV  FV
Sbjct: 233 HNNKLRTLPT---------------------------DILNLRRLQQLSLRNNPLVHSFV 265

Query: 286 SDMTYKPPSLLELASRTLK--VHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRI 343
            +M   PPSL EL+ RT++   H +    E LP +LV YL SA  CVNP+CKGV+FD R+
Sbjct: 266 HNMDLAPPSLKELSGRTVRQNYHNVPNLDEVLPTDLVAYLNSACQCVNPECKGVYFDARV 325

Query: 344 EHIKFVDFCGKYRIPLLQYLCSSRCITNSPNVMYGDVKNED-----MMKKVLLG 392
           EH+KFVDFCGKYR+PL+Q+LCS RC    P+V Y      +     +M++VLLG
Sbjct: 326 EHVKFVDFCGKYRVPLMQFLCSPRCSAGIPSVDYETSSESEEEIEPIMRRVLLG 379


>gi|209154724|gb|ACI33594.1| Leucine-rich repeat-containing protein 58 [Salmo salar]
          Length = 351

 Score =  256 bits (654), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 147/340 (43%), Positives = 197/340 (57%), Gaps = 36/340 (10%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L LY+N L+ FP +   F+ L  LD+SNN +T L   I     L TLIA+NN L   S P
Sbjct: 40  LYLYNNRLTVFPASVCLFSKLEVLDISNNGLTVLCADIQRLSNLKTLIAKNNSLNEFSFP 99

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
           K+  +++ +   N SGN  E+ P+Q L +  LKYL LG N L  +P EI  +  L +L L
Sbjct: 100 KEFGSMQ-IDTLNFSGNIFEEVPVQFLKLQRLKYLSLGGNRLKAIPAEIENVTSLEMLYL 158

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
           GGN +T IP    +L  L  L+L DN+++++P  ++ L  L+ L LHNN L  LP EI++
Sbjct: 159 GGNLITSIPPELANLRGLRYLVLCDNRIQNVPPQLTRLYSLRCLSLHNNLLTYLPREILS 218

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELA 299
                      L+H                L ELSLR NPLV+RF+ DMTY PPSLLELA
Sbjct: 219 -----------LVH----------------LQELSLRGNPLVVRFIKDMTYDPPSLLELA 251

Query: 300 SRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPL 359
            RT+K   + Y   +LP NLV YL+ A  C NPKC GV+FD+ + HIKFVDFCGKYR+P 
Sbjct: 252 GRTIKSCNLPYLPNYLPGNLVHYLDLASKCPNPKCTGVYFDSCVRHIKFVDFCGKYRLPF 311

Query: 360 LQYLCSSRCITNSPNVMYGDVKNE-------DMMKKVLLG 392
           + YLCS  C +   +    D ++E       D +++VLLG
Sbjct: 312 MHYLCSPECTSPCSSNPQSDTESEDEKCVSADRLQRVLLG 351


>gi|341898766|gb|EGT54701.1| hypothetical protein CAEBREN_32822 [Caenorhabditis brenneri]
          Length = 375

 Score =  255 bits (652), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 161/373 (43%), Positives = 218/373 (58%), Gaps = 44/373 (11%)

Query: 28  DFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLS 87
           D+    +     A Q    P  +Y+  P+NI  L L HN+       A+ F+N+  LD+S
Sbjct: 39  DYGLEEIPMRYFAEQ----PGEEYD--PQNIKKLDLTHNSFVVLRGLAT-FSNISMLDVS 91

Query: 88  NNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQIL 146
            N ++ LP+ I     L TLIARNNLL  E LPK M  L+N++   LSGN+LE  P  IL
Sbjct: 92  FNSLSALPEDIGTLTNLKTLIARNNLL--EHLPKGMQLLENMEHLYLSGNRLEYLPPVIL 149

Query: 147 DIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQ 206
            +  LK L+LG N ++  P  I+ L  L V  LGGN L +IP + G L QLE L L DN 
Sbjct: 150 TMRKLKTLHLGGNRIDSCPSNISVLTSLTVFYLGGNRLREIPASIGCLDQLENLGLCDNI 209

Query: 207 LESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIIT 266
           LE++P+++ +L  L++L LHNNKLRTLPT                           +I+ 
Sbjct: 210 LETIPSTLGDLHYLETLSLHNNKLRTLPT---------------------------DILN 242

Query: 267 LKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLK--VHEIDYSQEHLPQNLVQYLE 324
           L+ L +LSLR+NPLV  FV +M   PPSL EL+ R+++  V      ++ LP +LV YL 
Sbjct: 243 LRRLQQLSLRNNPLVHSFVHNMDLAPPSLKELSGRSVRQNVELTPKLEDILPTDLVAYLA 302

Query: 325 SAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCITNSPNV-----MYGD 379
           SA  CVNP+CKGV+FD R+EH+KFVDFCGKYR+PL+Q+LCS RC    P V        +
Sbjct: 303 SACQCVNPECKGVYFDARVEHVKFVDFCGKYRVPLMQFLCSPRCSAGVPQVDSETSSESE 362

Query: 380 VKNEDMMKKVLLG 392
            + E +M++VLLG
Sbjct: 363 EEIEPIMRRVLLG 375


>gi|410896538|ref|XP_003961756.1| PREDICTED: leucine-rich repeat-containing protein 58-like [Takifugu
           rubripes]
          Length = 352

 Score =  253 bits (647), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 161/400 (40%), Positives = 229/400 (57%), Gaps = 56/400 (14%)

Query: 1   MSYNYGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDT 60
           M    G++++ DS             LDFS  SL++  + +  E        ++  +   
Sbjct: 1   MENREGAAAAGDS------------VLDFSRLSLNTFNVDSFSE--------ERKRDTRQ 40

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L +N L+ FP + S F+NL  LD+SNN ++ + + IT    L TLIA+NN L   SLP
Sbjct: 41  LYLNYNRLASFPSSVSLFSNLEFLDISNNGLSAICEGITRLARLKTLIAKNNRLDEFSLP 100

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
           K+  +L+ L+V N SGN+ E+ P+Q + +  L+ L LG N L  +P EI +L +L +L L
Sbjct: 101 KEFGSLQ-LEVLNFSGNRFEEIPLQCMKLLQLQSLSLGGNRLKSIPAEIEQLTRLELLYL 159

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
           GGN ++ IP     L  L  L+L DN+++S+P  ++ +  L+SL LHNN L  LP EI++
Sbjct: 160 GGNLISAIPPEVAYLPNLSYLVLCDNRIQSIPPQLTRMHSLRSLSLHNNLLTYLPREILS 219

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELA 299
                      L+H                L ELSLR NPLV+RFV +MTY PPSLLELA
Sbjct: 220 -----------LVH----------------LHELSLRGNPLVVRFVKEMTYDPPSLLELA 252

Query: 300 SRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPL 359
            RT+K   I Y    LP NL++YL+ A  C NPKC GV+FD+ + HIKFVDFCGKYR+PL
Sbjct: 253 GRTIKSRNIPYYPCDLPANLLRYLDLASKCPNPKCAGVYFDSCVRHIKFVDFCGKYRLPL 312

Query: 360 LQYLCSSRCITNSPNVMYGDVKNED-------MMKKVLLG 392
           + YLCS +C +   +    D ++ED        +++VLLG
Sbjct: 313 MHYLCSPQCTSPCSSNPQSDAESEDESSVPAYRLQRVLLG 352


>gi|348530986|ref|XP_003452991.1| PREDICTED: leucine-rich repeat-containing protein 58-like
           [Oreochromis niloticus]
          Length = 352

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 148/349 (42%), Positives = 205/349 (58%), Gaps = 36/349 (10%)

Query: 52  NKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARN 110
           +++  +   L L +N L+  P + + F NL  LD+SNN ++ + + I     L TLIA+N
Sbjct: 32  DRRKRDTKQLYLSYNRLASLPSSVTLFFNLEFLDISNNGLSFICEDIMRLTKLKTLIAKN 91

Query: 111 NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
           N L   SLPK+  +L+ L+V N SGN+ E+ P+Q   +  L+ L LG N L  +P EI  
Sbjct: 92  NRLDEFSLPKEFGSLQ-LEVLNFSGNRFEEIPLQCTKLLRLQSLSLGGNRLKSIPAEIEN 150

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L +L LGGN ++ IP    +L  L  L+L DN+++S+P  ++ L  L+SL LHNN L
Sbjct: 151 LTSLEMLYLGGNLISAIPPEVANLPYLTYLVLCDNRIQSVPPQLTRLHSLRSLSLHNNLL 210

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTY 290
             LP EI++           L+H                L ELSLR NPLV+RFV +MTY
Sbjct: 211 TYLPREILS-----------LVH----------------LQELSLRGNPLVVRFVKEMTY 243

Query: 291 KPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVD 350
            PPSLLELA RT+K   + YS   LP NLV+YL+ A  C NPKC GV+FD+ +  IKFVD
Sbjct: 244 DPPSLLELAGRTIKSRNLLYSPFDLPANLVRYLDLASKCPNPKCAGVYFDSCVRQIKFVD 303

Query: 351 FCGKYRIPLLQYLCSSRCITNSPNVMYGDVKNE-------DMMKKVLLG 392
           FCGKYR+PL+ YLCS  C +   +    D ++E       D +++VLLG
Sbjct: 304 FCGKYRLPLMHYLCSPECTSPCSSNPQSDAESEEENSVPADRLQRVLLG 352


>gi|284009804|ref|NP_001165009.1| leucine-rich repeat-containing protein 58 [Xenopus (Silurana)
           tropicalis]
 gi|162416065|sp|A4IHG1.1|LRC58_XENTR RecName: Full=Leucine-rich repeat-containing protein 58
 gi|134025797|gb|AAI35511.1| Unknown (protein for MGC:121998) [Xenopus (Silurana) tropicalis]
          Length = 349

 Score =  251 bits (642), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 150/347 (43%), Positives = 201/347 (57%), Gaps = 37/347 (10%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI-TNFPLSTLIARNNL 112
           K +++  LLL HN L   P + + FT+L  LD+SNN + ++ + I     L TL+A+NN 
Sbjct: 32  KRKDVQQLLLPHNRLVVLPPHVNSFTHLHLLDISNNNMAYIGEEILGLTKLKTLLAKNNR 91

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L   S PK++  L+ L+V NLSGN+ E+ P Q L I TLK L LG N L  +P EI  L 
Sbjct: 92  LDEFSFPKELGGLR-LEVLNLSGNRFEEIPDQFLQIQTLKSLSLGGNRLKSIPAEIENLI 150

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L LGGN ++ IP    +L  L  L+L DN+++S+P  ++ +  L+SL LH      
Sbjct: 151 SLEFLYLGGNFISSIPPELANLPYLSYLVLCDNRIQSVPPQLAQVHSLRSLSLH------ 204

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKP 292
                                 N L  LP EI++L  L ELSLR NPLV+RFV D+TY P
Sbjct: 205 ----------------------NLLTYLPREILSLVQLQELSLRGNPLVVRFVRDLTYTP 242

Query: 293 PSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFC 352
           P+LLELA RT+K   I Y  + LP+NL+ YL+ A  C NPKC GV+FD  +  IKFVDFC
Sbjct: 243 PTLLELAGRTVKSRGIPYCPQELPENLLMYLDLASKCPNPKCGGVYFDCCVRQIKFVDFC 302

Query: 353 GKYRIPLLQYLCSSRCITNSPNVMYGDVKNED-------MMKKVLLG 392
           GKYR+PL+ YLCS  C +   +    +  +ED        M+KVLLG
Sbjct: 303 GKYRLPLMHYLCSPECSSPCGSTSQSESDSEDEANAAARRMQKVLLG 349


>gi|189523275|ref|XP_685872.2| PREDICTED: leucine-rich repeat-containing protein 58-like isoform 1
           [Danio rerio]
          Length = 351

 Score =  249 bits (636), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 143/319 (44%), Positives = 197/319 (61%), Gaps = 29/319 (9%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNN 111
           K+ ++   L L +N ++F  ++ S F+NL  LD+SNN ++ + + IT    L TLIA+NN
Sbjct: 32  KRRKDTKQLYLCYNRMTFLAESISLFSNLEFLDISNNTLSVICEDITRLTKLKTLIAKNN 91

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            L   SLPK   +++ L+V N SGN+ E+ P Q L +  L+ L LG N L  +P EI  L
Sbjct: 92  RLNEFSLPKHFGSMQ-LEVLNFSGNRFEEMPTQCLQLLRLQSLSLGGNRLKSIPAEIESL 150

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
            +L +L LGGN ++ IP    +L  L  L+L DN+++S+P  ++ L  L+SL LHNN L 
Sbjct: 151 TRLELLYLGGNQISTIPAELANLPGLSYLVLCDNRIQSVPPQLNRLYSLRSLSLHNNLLT 210

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYK 291
            LP EI++           L+H                L ELSLR NPLV+RFV DMTY 
Sbjct: 211 YLPREILS-----------LVH----------------LQELSLRGNPLVVRFVKDMTYD 243

Query: 292 PPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDF 351
           PPSLLEL+ RT+K   + YS + LP +LV YL++A  C NPKC GV+FD+ + HIKFVDF
Sbjct: 244 PPSLLELSGRTIKSKNLLYSHKDLPSHLVTYLDTASKCPNPKCAGVYFDSCVRHIKFVDF 303

Query: 352 CGKYRIPLLQYLCSSRCIT 370
           CGKYR+PL+ YLCS  C +
Sbjct: 304 CGKYRLPLMHYLCSPECTS 322


>gi|427796677|gb|JAA63790.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
          Length = 390

 Score =  247 bits (631), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 150/382 (39%), Positives = 216/382 (56%), Gaps = 49/382 (12%)

Query: 26  TLDFSYSSLDSETLATQI--ELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR- 82
            +D S   LD+E+L +++    L   D  + P    +LLL  N L   P  A     LR 
Sbjct: 43  VVDLSGQELDAESLESRLLDAALSQEDDGQAPR---SLLLERNRLERLPSAALAPLGLRL 99

Query: 83  -SLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
            +LD+SNNR+T L + +    L  L+AR N L    LPK + +L  L+V NLSGNQ    
Sbjct: 100 HTLDVSNNRLTSLGEQLPCPSLRVLLARGNRLN--ELPKHLPSL--LQVLNLSGNQFTTL 155

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P Q+  +  L++LY+G N L  +P  +  +  L  L LGGN L ++P + G L++L +L 
Sbjct: 156 PDQLTQLTELRHLYMGGNLLTQLPDCVGNMLSLEALYLGGNQLEELPASLGRLWRLHSLG 215

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           L+ N+L S+PAS+++L+ L SL LH+N+LR                           TLP
Sbjct: 216 LNGNRLASVPASLADLRSLCSLALHDNRLR---------------------------TLP 248

Query: 262 TEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTL---KVHEIDYSQEHLPQN 318
             ++ L  L ELSLR NPLV RFV D+TY+ PSL ELA+R +    +H+   +  +LP +
Sbjct: 249 PGLVQLGQLVELSLRGNPLVGRFVHDLTYRAPSLRELAARCVIRAGLHKSYEASVYLPAS 308

Query: 319 LVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCITNSPNVMYG 378
           + +YL SA HCVNP+C GV+FD+ +E I+FVDFCGKYR+PLLQYLCS+ C +        
Sbjct: 309 VREYLASAQHCVNPRCGGVYFDSHVESIQFVDFCGKYRLPLLQYLCSAHCSSQVQADSSA 368

Query: 379 DV--------KNEDMMKKVLLG 392
                     ++ D +++VLLG
Sbjct: 369 SSSSVQDPVEEDPDRLRRVLLG 390


>gi|27735401|gb|AAH41309.1| LOC398462 protein, partial [Xenopus laevis]
 gi|28422172|gb|AAH44078.1| LOC398462 protein, partial [Xenopus laevis]
          Length = 289

 Score =  246 bits (627), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 140/317 (44%), Positives = 187/317 (58%), Gaps = 36/317 (11%)

Query: 84  LDLSNNRITHLPQAITNFPLSTLI-ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
           LD+SNN + ++ + I        + A+NN L   S PK+M  ++ L+V NLSGN+ E+ P
Sbjct: 1   LDISNNNMVYIGEEILGLTKLKTLLAKNNRLDEFSFPKEMGGMR-LEVLNLSGNRFEEIP 59

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
            Q L IPTLK L LG N L  +P EI  L  L  L LGGN ++ IP    +L  L  L+L
Sbjct: 60  DQFLQIPTLKSLSLGGNRLKSIPAEIENLISLEFLYLGGNFISSIPSELANLPYLSYLVL 119

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
            DN+++S+P  ++ +  L+SL LHNN L  LP EI++           L+H         
Sbjct: 120 CDNRIQSIPPQLAQVHSLRSLSLHNNLLTYLPREILS-----------LVH--------- 159

Query: 263 EIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQY 322
                  L ELSLR NPLV+RFV D+TY PP+LLELA RT+K H I Y    LP+NL++Y
Sbjct: 160 -------LHELSLRGNPLVVRFVRDLTYTPPTLLELAGRTIKSHGIPYCPWELPENLLRY 212

Query: 323 LESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCITNSPNVMYGDVKN 382
           L+ A  C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YLCS  C +   +  + +  +
Sbjct: 213 LDLASKCPNPKCSGVYFDCCVRQIKFVDFCGKYRLPLMHYLCSPECSSPCGSTSHSESDS 272

Query: 383 ED-------MMKKVLLG 392
           ED        M+KVLLG
Sbjct: 273 EDEVNVAARRMQKVLLG 289



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 3/129 (2%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAE 116
           ++ L L  N     PD   +   L+SL L  NR+  +P  I N   L  L    N ++  
Sbjct: 45  LEVLNLSGNRFEEIPDQFLQIPTLKSLSLGGNRLKSIPAEIENLISLEFLYLGGNFIS-- 102

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           S+P +++NL  L    L  N+++  P Q+  + +L+ L L NN L ++PREI  L  LH 
Sbjct: 103 SIPSELANLPYLSYLVLCDNRIQSIPPQLAQVHSLRSLSLHNNLLTYLPREILSLVHLHE 162

Query: 177 LSLGGNSLT 185
           LSL GN L 
Sbjct: 163 LSLRGNPLV 171


>gi|427779237|gb|JAA55070.1| Hypothetical protein [Rhipicephalus pulchellus]
          Length = 368

 Score =  245 bits (625), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 150/389 (38%), Positives = 216/389 (55%), Gaps = 56/389 (14%)

Query: 26  TLDFSYSSLDSETLATQI--ELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR- 82
            +D S   LD+E+L +++    L   D  + P    +LLL  N L   P  A     LR 
Sbjct: 14  VVDLSGQELDAESLESRLLDAALSQEDDGQAPR---SLLLERNRLERLPSAALAPLGLRX 70

Query: 83  --------SLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLS 134
                   +LD+SNNR+T L + +    L  L+AR N L    LPK + +L  L+V NLS
Sbjct: 71  APLGLRLHTLDVSNNRLTSLGEQLPCPSLRVLLARGNRLN--ELPKHLPSL--LQVLNLS 126

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
           GNQ    P Q+  +  L++LY+G N L  +P  +  +  L  L LGGN L ++P + G L
Sbjct: 127 GNQFTTLPDQLTQLTELRHLYMGGNLLTQLPDCVGNMLSLEALYLGGNQLEELPASLGRL 186

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
           ++L +L L+ N+L S+PAS+++L+ L SL LH+N+LR                       
Sbjct: 187 WRLHSLGLNGNRLASVPASLADLRSLCSLALHDNRLR----------------------- 223

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTL---KVHEIDYS 311
               TLP  ++ L  L ELSLR NPLV RFV D+TY+ PSL ELA+R +    +H+   +
Sbjct: 224 ----TLPPGLVQLGQLVELSLRGNPLVGRFVHDLTYRAPSLRELAARCVIRAGLHKSYEA 279

Query: 312 QEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCITN 371
             +LP ++ +YL SA HCVNP+C GV+FD+ +E I+FVDFCGKYR+PLLQYLCS+ C + 
Sbjct: 280 SVYLPASVREYLASAQHCVNPRCGGVYFDSHVESIQFVDFCGKYRLPLLQYLCSAHCSSQ 339

Query: 372 SPNVMYGDV--------KNEDMMKKVLLG 392
                            ++ D +++VLLG
Sbjct: 340 VQADSSASSSSVQDPVEEDPDRLRRVLLG 368


>gi|47226972|emb|CAG05864.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 384

 Score =  245 bits (625), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 150/373 (40%), Positives = 204/373 (54%), Gaps = 67/373 (17%)

Query: 59  DTLLLY--HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           DT  LY  HN ++  P + S F+NL  LDLS+N +T L   +     L TLIA+NN L  
Sbjct: 40  DTRQLYLNHNRVASLPSSVSLFSNLEFLDLSSNGLTALCDGVARLARLRTLIAKNNRLDE 99

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLPK+  +L+ L+V NLSGN+ E+ P+Q   +  L+ L LG N L  +P E+  L +L 
Sbjct: 100 SSLPKEFGSLR-LEVLNLSGNRFEEIPLQCTKLLHLQSLSLGGNRLRSIPAEVEHLTRLE 158

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L LGGN ++ IP    +L  L  L+L DN+++S+P  ++ +                  
Sbjct: 159 LLYLGGNLISAIPPELANLPNLSYLVLCDNRIQSIPPQLTRM------------------ 200

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
                      L+SL LHNN L  LP EI++L  L ELSLR NPLV+RFV +MTY PPSL
Sbjct: 201 ---------HSLRSLSLHNNLLTYLPREILSLVHLHELSLRGNPLVVRFVKEMTYDPPSL 251

Query: 296 LELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKG------------------- 336
           LELA RT+K   I Y    LP NL++YL+ A  C NPKC G                   
Sbjct: 252 LELAGRTIKSRNIPYYPCDLPANLLRYLDLASKCPNPKCAGKAPSCPAWDENPDSYSPLA 311

Query: 337 ----------VFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCITNSPNVMYGDVKNED-- 384
                     V+FD+ + HIKFVDFCGKYR+PL+ YLCS +C +   +    D ++ED  
Sbjct: 312 DPLSFVSPTGVYFDSCVRHIKFVDFCGKYRLPLMHYLCSPQCTSPCSSNPQSDAESEDES 371

Query: 385 -----MMKKVLLG 392
                 +++VLLG
Sbjct: 372 SVPAYRLQRVLLG 384


>gi|432935487|ref|XP_004082018.1| PREDICTED: leucine-rich repeat-containing protein 58-like [Oryzias
           latipes]
          Length = 352

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 159/375 (42%), Positives = 214/375 (57%), Gaps = 44/375 (11%)

Query: 26  TLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLD 85
            LDFS  SL++ +L        +   +++  +     L +N LS  P +   F NL  LD
Sbjct: 14  VLDFSRLSLNTLSL--------DAVSDERRRDTKQFYLNYNRLSSLPPSIGVFHNLEFLD 65

Query: 86  LSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQ 144
           +SNN +T +   IT    L TL+A+NN L   SLPKD  +L  L+V N SGN+ E+ P+Q
Sbjct: 66  ISNNGLTAICDDITRLTKLKTLLAKNNRLDEFSLPKDFGSLP-LEVLNFSGNRFEEIPLQ 124

Query: 145 ILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD 204
              +  L+ L +G N L  +P EI  L  L +L LGGN +T IP    +L  L  L+L D
Sbjct: 125 CTKLWRLQSLSIGGNRLKSIPTEIENLTSLEMLYLGGNLITAIPPEVANLPYLSYLVLCD 184

Query: 205 NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           N+++S+P  ++ L +L+SL LHNN L  LP EI++           L+H           
Sbjct: 185 NRIQSVPPQLTRLHLLRSLSLHNNLLTYLPREILS-----------LVH----------- 222

Query: 265 ITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLE 324
                L ELSLR NPLV+RFV +MTY PPSLLELA RT+K   I YS   LP NLV YL+
Sbjct: 223 -----LQELSLRGNPLVVRFVKEMTYNPPSLLELAGRTVKSRNIPYSPCELPSNLVFYLD 277

Query: 325 SAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCITNSPNVMYGDVKNE- 383
            A  C NPKC GV+FD+ + HIKFVDFCGKYR+PL+ YLCS  C +   +    D ++E 
Sbjct: 278 LASKCPNPKCAGVYFDSCVRHIKFVDFCGKYRLPLMHYLCSPECRSPCSSNPQSDAESED 337

Query: 384 ------DMMKKVLLG 392
                 D +++VLLG
Sbjct: 338 ENSVPADRLQRVLLG 352


>gi|312434031|ref|NP_001182487.1| leucine-rich repeat-containing protein 58 [Rattus norvegicus]
          Length = 366

 Score =  243 bits (620), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 146/343 (42%), Positives = 200/343 (58%), Gaps = 34/343 (9%)

Query: 27  LDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDN-ASKFTNLRSLD 85
           L++S  S+ +E L +++E         + E +  LLL +N L+  P    S F +L+ LD
Sbjct: 11  LNWSRLSVSAEALESELEARAEERRGSR-EALLRLLLPYNRLTSLPRALGSGFPHLQLLD 69

Query: 86  LSNNRITHL-PQAITNFPLSTLIARNNLLTA-ESLPKDMSN---LKNLKVFNLSGNQLEQ 140
           +S N +T L P+ +T   L TL+ARNN L    SLPK +      ++L+V NLSGN  ++
Sbjct: 70  VSGNALTALGPELLTLSGLRTLLARNNRLGGPGSLPKGLGQSPLCRSLQVLNLSGNCFQE 129

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P  +L++  L+ L LG N L  +P EI  L  L  L LGGN + +IP    +L  L  L
Sbjct: 130 LPASLLELRALQTLSLGGNQLQSIPAEIENLQSLECLYLGGNFIKEIPPELANLPSLNYL 189

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
           +L DN+++S+P  +S L                             L+SL LHNN L  L
Sbjct: 190 VLCDNKIQSVPPQLSQL---------------------------HSLRSLSLHNNLLTYL 222

Query: 261 PTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLV 320
           P EI+ L  L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+  I Y+   LP NL+
Sbjct: 223 PREILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRSISYTPYDLPGNLL 282

Query: 321 QYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
           +YL SA +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 283 RYLGSASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 325


>gi|410037395|ref|XP_516671.3| PREDICTED: leucine-rich repeat-containing protein 58 [Pan
           troglodytes]
          Length = 481

 Score =  243 bits (619), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 148/349 (42%), Positives = 202/349 (57%), Gaps = 34/349 (9%)

Query: 21  TVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDN-ASKFT 79
           T     L++S  S+ +ETL +++E         + E +  LLL HN L   P    S F 
Sbjct: 120 TAGEAELNWSRLSVSTETLESELEARGEERRGAR-EALLRLLLPHNRLVSLPRALGSGFP 178

Query: 80  NLRSLDLSNNRITHL-PQAITNFPLSTLIARNNLLTAES-LPKDMSN---LKNLKVFNLS 134
           +L+ LD+S N +T L P+ +    L TL+A+NN L   S LPK ++     ++L+V NLS
Sbjct: 179 HLQLLDVSGNALTALGPELLALRGLRTLLAKNNRLGGPSALPKGLAQSPLCRSLQVLNLS 238

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
           GN  ++ P  +L++  L+ L LG N L  +P EI  L  L  L LGGN + +IP   G+L
Sbjct: 239 GNCFQEVPASLLELRALQTLSLGGNQLQSIPAEIENLQSLECLYLGGNFIKEIPPELGNL 298

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
             L  L+L DN+++S+P  +S L                             L+SL LHN
Sbjct: 299 PSLNYLVLCDNKIQSVPPQLSQL---------------------------HSLRSLSLHN 331

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEH 314
           N L  LP EI+ L  L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+  I Y+   
Sbjct: 332 NLLTYLPREILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRNISYTPYD 391

Query: 315 LPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
           LP NL++YL SA +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 392 LPGNLLRYLGSASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 440


>gi|426341747|ref|XP_004036187.1| PREDICTED: leucine-rich repeat-containing protein 58 [Gorilla
           gorilla gorilla]
          Length = 481

 Score =  243 bits (619), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 148/349 (42%), Positives = 201/349 (57%), Gaps = 34/349 (9%)

Query: 21  TVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDN-ASKFT 79
           T     L++S  S+ +ETL +++E     D     E +  LLL HN L   P    S F 
Sbjct: 120 TAGEAELNWSRLSVSTETLESELEAR-GEDRRGAREALLRLLLPHNRLVSLPRALGSGFP 178

Query: 80  NLRSLDLSNNRITHL-PQAITNFPLSTLIARNNLLTAES-LPKDMSN---LKNLKVFNLS 134
           +L+ LD+S N +T L P+ +    L TL+A+NN L   S LPK ++     ++L+V N S
Sbjct: 179 HLQLLDVSGNALTALGPELLALRGLRTLLAKNNRLGGPSALPKGLAQSPLCRSLQVLNFS 238

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
           GN  ++ P  +L++  L+ L LG N L  +P EI  L  L  L LGGN + +IP   G+L
Sbjct: 239 GNCFQEVPASLLELRALQTLSLGGNQLQSIPAEIENLQSLECLYLGGNFIKEIPPELGNL 298

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
             L  L+L DN+++S+P  +S L                             L+SL LHN
Sbjct: 299 PSLNYLVLCDNKIQSVPPQLSQL---------------------------HSLRSLSLHN 331

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEH 314
           N L  LP EI+ L  L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+  I Y+   
Sbjct: 332 NLLTYLPREILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRNISYTPYD 391

Query: 315 LPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
           LP NL++YL SA +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 392 LPGNLLRYLGSASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 440


>gi|109033373|ref|XP_001104236.1| PREDICTED: leucine-rich repeat-containing protein 58 [Macaca
           mulatta]
          Length = 488

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 148/349 (42%), Positives = 202/349 (57%), Gaps = 34/349 (9%)

Query: 21  TVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDN-ASKFT 79
           T     L++S  S+ +ETL +++E         + E +  LLL HN L   P    S F 
Sbjct: 127 TAGEAELNWSRLSVSTETLESELEARGEERRGAR-EALLRLLLPHNRLVSLPRALGSGFP 185

Query: 80  NLRSLDLSNNRITHL-PQAITNFPLSTLIARNNLLTAES-LPKDMSN---LKNLKVFNLS 134
           +L+ LD+S N +T L P+ +    L TL+A+NN L   S LPK ++     ++L+V NLS
Sbjct: 186 HLQLLDVSGNALTALGPELLALRGLRTLLAKNNRLGGPSALPKGLAQSPLCRSLQVLNLS 245

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
           GN  ++ P  +L++  L+ L LG N L  +P EI  L  L  L LGGN + +IP   G+L
Sbjct: 246 GNCFQEVPASLLELRALQTLSLGGNQLQSIPAEIENLQSLECLYLGGNFIKEIPPELGNL 305

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
             L  L+L DN+++S+P  +S L                             L+SL LHN
Sbjct: 306 PSLNYLVLCDNKIQSVPPQLSQL---------------------------HSLRSLSLHN 338

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEH 314
           N L  LP EI+ L  L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+  I Y+   
Sbjct: 339 NLLTYLPREILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRNISYTPYD 398

Query: 315 LPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
           LP NL++YL SA +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 399 LPGNLLRYLGSASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 447


>gi|15489314|gb|AAH13757.1| LRRC58 protein, partial [Homo sapiens]
          Length = 403

 Score =  242 bits (618), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 148/349 (42%), Positives = 202/349 (57%), Gaps = 34/349 (9%)

Query: 21  TVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDN-ASKFT 79
           T     L++S  S+ +ETL +++E         + E +  LLL HN L   P    S F 
Sbjct: 42  TAGEAELNWSRLSVSTETLESELEARGEERRGAR-EALLRLLLPHNRLVSLPRALGSGFP 100

Query: 80  NLRSLDLSNNRITHL-PQAITNFPLSTLIARNNLLTAES-LPKDMSN---LKNLKVFNLS 134
           +L+ LD+S N +T L P+ +    L TL+A+NN L   S LPK ++     ++L+V NLS
Sbjct: 101 HLQLLDVSGNALTALGPELLALRGLRTLLAKNNRLGGPSALPKGLAQSPLCRSLQVLNLS 160

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
           GN  ++ P  +L++  L+ L LG N L  +P EI  L  L  L LGGN + +IP   G+L
Sbjct: 161 GNCFQEVPASLLELRALQTLSLGGNQLQSIPAEIENLQSLECLYLGGNFIKEIPPELGNL 220

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
             L  L+L DN+++S+P  +S L                             L+SL LHN
Sbjct: 221 PSLNYLVLCDNKIQSIPPQLSQL---------------------------HSLRSLSLHN 253

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEH 314
           N L  LP EI+ L  L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+  I Y+   
Sbjct: 254 NLLTYLPREILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRNISYTPYD 313

Query: 315 LPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
           LP NL++YL SA +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 314 LPGNLLRYLGSASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 362


>gi|395733273|ref|XP_002813311.2| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 58 [Pongo abelii]
          Length = 528

 Score =  242 bits (617), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 148/349 (42%), Positives = 202/349 (57%), Gaps = 34/349 (9%)

Query: 21  TVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDN-ASKFT 79
           T     L++S  S+ +ETL +++E         + E +  LLL HN L   P    S F 
Sbjct: 167 TAGEAELNWSRLSVSTETLESELEARGEERRGAR-EALLRLLLPHNRLVSLPRALGSGFP 225

Query: 80  NLRSLDLSNNRITHL-PQAITNFPLSTLIARNNLLTAES-LPKDMSN---LKNLKVFNLS 134
           +L+ LD+S N +T L P+ +    L TL+A+NN L   S LPK ++     ++L+V NLS
Sbjct: 226 HLQLLDVSGNALTALGPELLALRGLRTLLAKNNRLGGPSALPKGLAQSPLCRSLQVLNLS 285

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
           GN  ++ P  +L++  L+ L LG N L  +P EI  L  L  L LGGN + +IP   G+L
Sbjct: 286 GNCFQEVPASLLELRALQTLSLGGNQLQSIPAEIENLQSLECLYLGGNFIKEIPPELGNL 345

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
             L  L+L DN+++S+P  +S L                             L+SL LHN
Sbjct: 346 PSLNYLVLCDNKIQSVPPQLSQL---------------------------HSLRSLSLHN 378

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEH 314
           N L  LP EI+ L  L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+  I Y+   
Sbjct: 379 NLLTYLPREILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRNISYTPYD 438

Query: 315 LPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
           LP NL++YL SA +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 439 LPGNLLRYLGSASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 487


>gi|402859161|ref|XP_003894036.1| PREDICTED: leucine-rich repeat-containing protein 58 [Papio anubis]
          Length = 488

 Score =  242 bits (617), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 148/349 (42%), Positives = 202/349 (57%), Gaps = 34/349 (9%)

Query: 21  TVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDN-ASKFT 79
           T     L++S  S+ +ETL +++E         + E +  LLL HN L   P    S F 
Sbjct: 127 TAGEAELNWSRLSVSTETLESELEARGEERRGAR-EALLRLLLPHNRLVSLPRALGSGFP 185

Query: 80  NLRSLDLSNNRITHL-PQAITNFPLSTLIARNNLLTAES-LPKDMSN---LKNLKVFNLS 134
           +L+ LD+S N +T L P+ +    L TL+A+NN L   S LPK ++     ++L+V NLS
Sbjct: 186 HLQLLDVSGNALTALGPELLALRGLRTLLAKNNRLGGPSALPKGLAQSPLCRSLQVLNLS 245

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
           GN  ++ P  +L++  L+ L LG N L  +P EI  L  L  L LGGN + +IP   G+L
Sbjct: 246 GNCFQEVPASLLELRALQTLSLGGNQLQSIPAEIENLQSLECLYLGGNFIKEIPPELGNL 305

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
             L  L+L DN+++S+P  +S L                             L+SL LHN
Sbjct: 306 PSLNYLVLCDNKIQSVPPQLSQL---------------------------HSLRSLSLHN 338

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEH 314
           N L  LP EI+ L  L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+  I Y+   
Sbjct: 339 NLLTYLPREILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRNISYTPYD 398

Query: 315 LPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
           LP NL++YL SA +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 399 LPGNLLRYLGSASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 447


>gi|397509760|ref|XP_003825283.1| PREDICTED: leucine-rich repeat-containing protein 58 [Pan paniscus]
          Length = 461

 Score =  241 bits (616), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 149/353 (42%), Positives = 204/353 (57%), Gaps = 34/353 (9%)

Query: 17  DSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDN-A 75
            S  T     L++S  S+ +ETL +++E         + E +  LLL HN L   P    
Sbjct: 96  GSVVTAGEAELNWSRLSVSTETLESELEARGEERRGAR-EALLRLLLPHNRLVSLPRALG 154

Query: 76  SKFTNLRSLDLSNNRITHL-PQAITNFPLSTLIARNNLLTAES-LPKDMSN---LKNLKV 130
           S F +L+ LD+S N +T L P+ ++   L TL+A+NN L   S LPK ++     ++L+V
Sbjct: 155 SGFPHLQLLDVSGNALTALGPELLSLRGLRTLLAKNNRLGGPSALPKGLAQSPLCRSLQV 214

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NLSGN  ++ P  +L++  L+ L LG N L  +P EI  L  L  L LGGN + +IP  
Sbjct: 215 LNLSGNCFQEVPASLLELRALQTLSLGGNQLQSIPAEIENLQSLECLYLGGNFIKEIPPE 274

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
            G+L  L  L+L DN+++S+P  +S L                             L+SL
Sbjct: 275 LGNLPSLNYLVLCDNKIQSVPPQLSQL---------------------------HSLRSL 307

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDY 310
            LHNN L  LP EI+ L  L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+  I Y
Sbjct: 308 SLHNNLLTYLPREILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRNISY 367

Query: 311 SQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
           +   LP NL++YL SA +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 368 TPYDLPGNLLRYLGSASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 420


>gi|332225566|ref|XP_003261952.1| PREDICTED: leucine-rich repeat-containing protein 58 [Nomascus
           leucogenys]
          Length = 477

 Score =  241 bits (615), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 147/349 (42%), Positives = 202/349 (57%), Gaps = 34/349 (9%)

Query: 21  TVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDN-ASKFT 79
           T     L++S  S+ +ETL ++++         + E +  LLL HN L   P    S F 
Sbjct: 116 TAGEAELNWSRLSVSTETLESELQARGEERRGAR-EALLRLLLPHNRLVSLPRALGSGFP 174

Query: 80  NLRSLDLSNNRITHL-PQAITNFPLSTLIARNNLLTAES-LPKDMSN---LKNLKVFNLS 134
           +L+ LD+S N +T L P+ +    L TL+A+NN L   S LPK ++     ++L+V NLS
Sbjct: 175 HLQLLDVSGNALTALGPELLALRGLRTLLAKNNRLGGPSALPKGLAQSPLCRSLQVLNLS 234

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
           GN  ++ P  +L++  L+ L LG N L  +P EI  L  L  L LGGN + +IP   G+L
Sbjct: 235 GNCFQEVPASLLELRALQTLSLGGNQLQSIPAEIENLQSLECLYLGGNFIKEIPPELGNL 294

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
             L  L+L DN+++S+P  +S L                             L+SL LHN
Sbjct: 295 PSLNYLVLCDNKIQSVPPQLSQL---------------------------HSLRSLSLHN 327

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEH 314
           N L  LP EI+ L  L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+  I Y+   
Sbjct: 328 NLLTYLPREILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRNISYTPYD 387

Query: 315 LPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
           LP NL++YL SA +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 388 LPGNLLRYLGSASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 436


>gi|355559368|gb|EHH16096.1| hypothetical protein EGK_11333 [Macaca mulatta]
 gi|380809406|gb|AFE76578.1| leucine-rich repeat-containing protein 58 [Macaca mulatta]
 gi|383414085|gb|AFH30256.1| leucine-rich repeat-containing protein 58 [Macaca mulatta]
 gi|383414087|gb|AFH30257.1| leucine-rich repeat-containing protein 58 [Macaca mulatta]
 gi|410228192|gb|JAA11315.1| leucine rich repeat containing 58 [Pan troglodytes]
 gi|410260476|gb|JAA18204.1| leucine rich repeat containing 58 [Pan troglodytes]
 gi|410260478|gb|JAA18205.1| leucine rich repeat containing 58 [Pan troglodytes]
 gi|410260480|gb|JAA18206.1| leucine rich repeat containing 58 [Pan troglodytes]
 gi|410297264|gb|JAA27232.1| leucine rich repeat containing 58 [Pan troglodytes]
 gi|410331019|gb|JAA34456.1| leucine rich repeat containing 58 [Pan troglodytes]
          Length = 371

 Score =  241 bits (614), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 148/349 (42%), Positives = 202/349 (57%), Gaps = 34/349 (9%)

Query: 21  TVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDN-ASKFT 79
           T     L++S  S+ +ETL +++E         + E +  LLL HN L   P    S F 
Sbjct: 10  TAGEAELNWSRLSVSTETLESELEARGEERRGAR-EALLRLLLPHNRLVSLPRALGSGFP 68

Query: 80  NLRSLDLSNNRITHL-PQAITNFPLSTLIARNNLLTAES-LPKDMSN---LKNLKVFNLS 134
           +L+ LD+S N +T L P+ +    L TL+A+NN L   S LPK ++     ++L+V NLS
Sbjct: 69  HLQLLDVSGNALTALGPELLALRGLRTLLAKNNRLGGPSALPKGLAQSPLCRSLQVLNLS 128

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
           GN  ++ P  +L++  L+ L LG N L  +P EI  L  L  L LGGN + +IP   G+L
Sbjct: 129 GNCFQEVPASLLELRALQTLSLGGNQLQSIPAEIENLQSLECLYLGGNFIKEIPPELGNL 188

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
             L  L+L DN+++S+P  +S L                             L+SL LHN
Sbjct: 189 PSLNYLVLCDNKIQSVPPQLSQL---------------------------HSLRSLSLHN 221

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEH 314
           N L  LP EI+ L  L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+  I Y+   
Sbjct: 222 NLLTYLPREILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRNISYTPYD 281

Query: 315 LPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
           LP NL++YL SA +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 282 LPGNLLRYLGSASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 330


>gi|71679812|gb|AAI00225.1| LOC398462 protein, partial [Xenopus laevis]
          Length = 275

 Score =  241 bits (614), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 133/292 (45%), Positives = 173/292 (59%), Gaps = 35/292 (11%)

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE 167
           A+NN L   S PK+M  ++ L+V NLSGN+ E+ P Q L IPTLK L LG N L  +P E
Sbjct: 12  AKNNRLDEFSFPKEMGGMR-LEVLNLSGNRFEEIPDQFLQIPTLKSLSLGGNRLKSIPAE 70

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           I  L  L  L LGGN ++ IP    +L  L  L+L DN+++S+P  ++ +          
Sbjct: 71  IENLISLEFLYLGGNFISSIPSELANLPYLSYLVLCDNRIQSIPPQLAQV---------- 120

Query: 228 NKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSD 287
                              L+SL LHNN L  LP EI++L  L ELSLR NPLV+RFV D
Sbjct: 121 -----------------HSLRSLSLHNNLLTYLPREILSLVHLHELSLRGNPLVVRFVRD 163

Query: 288 MTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIK 347
           +TY PP+LLELA RT+K H I Y    LP+NL++YL+ A  C NPKC GV+FD  +  IK
Sbjct: 164 LTYTPPTLLELAGRTIKSHGIPYCPWELPENLLRYLDLASKCPNPKCSGVYFDCCVRQIK 223

Query: 348 FVDFCGKYRIPLLQYLCSSRCITNSPNVMYGDVKNED-------MMKKVLLG 392
           FVDFCGKYR+PL+ YLCS  C +   +  + +  +ED        M+KVLLG
Sbjct: 224 FVDFCGKYRLPLMHYLCSPECSSPCGSTSHSESDSEDEVNVAARRMQKVLLG 275



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/129 (34%), Positives = 66/129 (51%), Gaps = 3/129 (2%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAE 116
           ++ L L  N     PD   +   L+SL L  NR+  +P  I N   L  L    N ++  
Sbjct: 31  LEVLNLSGNRFEEIPDQFLQIPTLKSLSLGGNRLKSIPAEIENLISLEFLYLGGNFIS-- 88

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           S+P +++NL  L    L  N+++  P Q+  + +L+ L L NN L ++PREI  L  LH 
Sbjct: 89  SIPSELANLPYLSYLVLCDNRIQSIPPQLAQVHSLRSLSLHNNLLTYLPREILSLVHLHE 148

Query: 177 LSLGGNSLT 185
           LSL GN L 
Sbjct: 149 LSLRGNPLV 157


>gi|351697685|gb|EHB00604.1| Leucine-rich repeat-containing protein 58 [Heterocephalus glaber]
          Length = 371

 Score =  241 bits (614), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 147/343 (42%), Positives = 200/343 (58%), Gaps = 34/343 (9%)

Query: 27  LDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDN-ASKFTNLRSLD 85
           L++S  S+ SETL +++E         + E +  LLL HN L   P    S F +L+ LD
Sbjct: 16  LNWSRLSVSSETLESELEARSEERRGSR-EALLRLLLPHNRLMSLPRALRSGFPHLQLLD 74

Query: 86  LSNNRITHL-PQAITNFPLSTLIARNNLLTAE-SLPKDMSNL---KNLKVFNLSGNQLEQ 140
           +S N +T L P+ +    L TL+ARNN L    +LPK ++     ++L+V NLSGN  ++
Sbjct: 75  VSGNSLTALGPELLALSGLRTLLARNNRLGGPGALPKGLAQSPLSRSLQVLNLSGNCFQE 134

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P  +L +  L+ L LG N L ++P EI  L  L  L LGGN + +IP    +L  L  L
Sbjct: 135 LPASLLGLRALQTLSLGGNQLQNIPAEIENLQSLECLYLGGNFIKEIPPELANLPSLNYL 194

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
           +L DN+++S+P  +S L                             L+SL LHNN L  L
Sbjct: 195 VLCDNKIQSVPPQLSQL---------------------------HSLRSLSLHNNLLTYL 227

Query: 261 PTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLV 320
           P EI+ L  L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+  I Y+   LP NL+
Sbjct: 228 PREILNLIHLEELSLRGNPLVVRFVRDLTYHPPTLLELAARTIKMRNISYTPCDLPGNLL 287

Query: 321 QYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
           +YL SA +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 288 KYLSSASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 330


>gi|153792305|ref|NP_001093148.1| leucine-rich repeat-containing protein 58 [Homo sapiens]
 gi|162416229|sp|Q96CX6.2|LRC58_HUMAN RecName: Full=Leucine-rich repeat-containing protein 58
 gi|117645296|emb|CAL38114.1| hypothetical protein [synthetic construct]
 gi|119599935|gb|EAW79529.1| hCG1645786 [Homo sapiens]
 gi|261859630|dbj|BAI46337.1| leucine rich repeat containing 58 [synthetic construct]
          Length = 371

 Score =  240 bits (613), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 148/349 (42%), Positives = 202/349 (57%), Gaps = 34/349 (9%)

Query: 21  TVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDN-ASKFT 79
           T     L++S  S+ +ETL +++E         + E +  LLL HN L   P    S F 
Sbjct: 10  TAGEAELNWSRLSVSTETLESELEARGEERRGAR-EALLRLLLPHNRLVSLPRALGSGFP 68

Query: 80  NLRSLDLSNNRITHL-PQAITNFPLSTLIARNNLLTAES-LPKDMSN---LKNLKVFNLS 134
           +L+ LD+S N +T L P+ +    L TL+A+NN L   S LPK ++     ++L+V NLS
Sbjct: 69  HLQLLDVSGNALTALGPELLALRGLRTLLAKNNRLGGPSALPKGLAQSPLCRSLQVLNLS 128

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
           GN  ++ P  +L++  L+ L LG N L  +P EI  L  L  L LGGN + +IP   G+L
Sbjct: 129 GNCFQEVPASLLELRALQTLSLGGNQLQSIPAEIENLQSLECLYLGGNFIKEIPPELGNL 188

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
             L  L+L DN+++S+P  +S L                             L+SL LHN
Sbjct: 189 PSLNYLVLCDNKIQSIPPQLSQL---------------------------HSLRSLSLHN 221

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEH 314
           N L  LP EI+ L  L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+  I Y+   
Sbjct: 222 NLLTYLPREILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRNISYTPYD 281

Query: 315 LPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
           LP NL++YL SA +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 282 LPGNLLRYLGSASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 330


>gi|296226167|ref|XP_002758846.1| PREDICTED: leucine-rich repeat-containing protein 58 [Callithrix
           jacchus]
          Length = 424

 Score =  238 bits (608), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 147/349 (42%), Positives = 201/349 (57%), Gaps = 34/349 (9%)

Query: 21  TVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDN-ASKFT 79
           T     L++S  S+  ETL +++E         + E +  LLL HN L   P    S F 
Sbjct: 63  TAGEAELNWSRLSVSPETLESELEARGEERRGAR-EALLRLLLPHNRLVSLPRALGSGFP 121

Query: 80  NLRSLDLSNNRITHL-PQAITNFPLSTLIARNNLLTAES-LPKDMSN---LKNLKVFNLS 134
           +L+ LD+S N +T L P+ +    L TL+A+NN L   S LPK ++     ++L+V NLS
Sbjct: 122 HLQLLDVSGNALTVLGPELLALRGLRTLLAKNNRLGGPSALPKGLAQSPLCRSLQVLNLS 181

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
           GN  ++ P  +L++  L+ L LG N L  +P EI  L +L  L LGGN + +IP    +L
Sbjct: 182 GNCFQEVPASLLELRALQTLSLGGNQLQSIPAEIENLQRLECLYLGGNFIKEIPPELANL 241

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
             L  L+L DN+++S+P  +S L                             L+SL LHN
Sbjct: 242 PSLNYLVLCDNKIQSVPPQLSQL---------------------------HSLRSLSLHN 274

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEH 314
           N L  LP EI+ L  L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+  I Y+   
Sbjct: 275 NLLTYLPREILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRNISYTPYD 334

Query: 315 LPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
           LP NL++YL SA +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 335 LPGNLLRYLGSASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 383


>gi|403288709|ref|XP_003935534.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 58 [Saimiri boliviensis boliviensis]
          Length = 531

 Score =  238 bits (608), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 147/349 (42%), Positives = 202/349 (57%), Gaps = 34/349 (9%)

Query: 21  TVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDN-ASKFT 79
           T     L++S  S+  ETL +++E         + E +  LLL HN+L   P    S F 
Sbjct: 170 TAGEAELNWSRLSVSPETLESELEARGEERRGAR-EALLRLLLPHNHLVSLPRALGSGFP 228

Query: 80  NLRSLDLSNNRITHL-PQAITNFPLSTLIARNNLLTAES-LPKDMSN---LKNLKVFNLS 134
           +L+ LD+S N +T L P+ +    L TL+A+NN L   S LPK ++     ++L+V NLS
Sbjct: 229 HLQLLDVSGNALTVLGPELLALRGLRTLLAKNNRLGGPSALPKGLAQSPLCRSLQVLNLS 288

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
           GN  ++ P  +L++  L+ L LG N L  +P EI  L +L  L LGGN + +IP    +L
Sbjct: 289 GNCFQEVPASLLELRALQTLSLGGNQLQSIPAEIENLQRLECLYLGGNFIKEIPPELANL 348

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
             L  L+L DN+++S+P  +S L                             L+SL LHN
Sbjct: 349 PSLNYLVLCDNKIQSVPPQLSQL---------------------------HSLRSLSLHN 381

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEH 314
           N L  LP EI+ L  L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+  I Y+   
Sbjct: 382 NLLTYLPREILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRNISYTPYD 441

Query: 315 LPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
           LP NL++YL SA +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 442 LPGNLLRYLGSASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 490


>gi|291400591|ref|XP_002716703.1| PREDICTED: LRRC58 protein-like [Oryctolagus cuniculus]
          Length = 371

 Score =  238 bits (607), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 146/343 (42%), Positives = 198/343 (57%), Gaps = 34/343 (9%)

Query: 27  LDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDN-ASKFTNLRSLD 85
           L++S  S+  ETL +++E         + E +  LLL HN L   P    S F +L+ LD
Sbjct: 16  LNWSRLSVSLETLESELEARGEERRGTR-EALLRLLLPHNRLVSLPRALGSGFPHLQLLD 74

Query: 86  LSNNRITHL-PQAITNFPLSTLIARNNLLTA-ESLPKDMSN---LKNLKVFNLSGNQLEQ 140
           +S N +T L P+ +    L TL+ARNN L    +LPK ++      +L+V NLSGN  ++
Sbjct: 75  VSGNALTALGPELLALRGLRTLLARNNRLGGPGALPKGLAQSPLRHSLQVLNLSGNCFQE 134

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P  +L++  L+ L LG N L  +P EI  L  L  L LGGN + +IP    +L  L  L
Sbjct: 135 VPPSLLELRALQTLSLGGNQLQSIPAEIENLQSLECLYLGGNFIKEIPPELANLPSLNYL 194

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
           +L DN+++S+P  +S L                             L+SL LHNN L  L
Sbjct: 195 VLCDNKIQSVPPQLSQL---------------------------HSLRSLSLHNNLLTYL 227

Query: 261 PTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLV 320
           P EI+ L  L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+  I Y+   LP NL+
Sbjct: 228 PREILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRNISYTPYDLPGNLL 287

Query: 321 QYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
           +YL SA +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 288 RYLSSASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 330


>gi|340375614|ref|XP_003386329.1| PREDICTED: leucine-rich repeat-containing protein 58-like
           [Amphimedon queenslandica]
          Length = 358

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 134/321 (41%), Positives = 184/321 (57%), Gaps = 37/321 (11%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           NLR +D S N  T LP  + +   L  L+ + N +  +SLP++M +L  L+  NLSGN+ 
Sbjct: 67  NLRKIDFSRNEFTELPLEVCSIASLRVLLLKCNKI--KSLPQEMGSLLQLEELNLSGNEF 124

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
           +QFP  +L +  L +L+LG N L  VP  INKL +L  L LGGN L  +P   G L++LE
Sbjct: 125 KQFPSPLLSLSRLTFLHLGANRLQEVPAGINKLTELSYLYLGGNRLQHVPPELGQLHKLE 184

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
           AL+LS NQL+ LP+    L                             LKSL LH+N+L+
Sbjct: 185 ALVLSGNQLQYLPSQFKGLM---------------------------SLKSLHLHDNQLQ 217

Query: 259 TLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQN 318
           TLP  I+ LK L ELSLR+NPLV+RF+ + +   PSLLEL+ R +K H I Y+ E +P+ 
Sbjct: 218 TLPQSIVRLKNLQELSLRNNPLVLRFIREYSGAIPSLLELSGRAVKHHAIPYTPEIIPET 277

Query: 319 LVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCITNSPNVMYG 378
           L  +L  A  C NP C GV+F  R   + FVDFCG+YR+PL+QYLCS +C  +     Y 
Sbjct: 278 LCDFLSRARKCDNPSCSGVYFTLRSRRVTFVDFCGRYRVPLMQYLCSEQCQGSDDVFNYS 337

Query: 379 -------DVKNEDMMKKVLLG 392
                  D  + + +K+VLLG
Sbjct: 338 SSSEDEEDFVSAERIKRVLLG 358



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 15/178 (8%)

Query: 21  TVSIKTLDFS---YSSLDSETLAT---QIELLPNNDYNKKPENIDTLL------LYHNNL 68
           +++++ +DFS   ++ L  E  +    ++ LL  N     P+ + +LL      L  N  
Sbjct: 65  SLNLRKIDFSRNEFTELPLEVCSIASLRVLLLKCNKIKSLPQEMGSLLQLEELNLSGNEF 124

Query: 69  SFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKN 127
             FP      + L  L L  NR+  +P  I     LS L    N L  + +P ++  L  
Sbjct: 125 KQFPSPLLSLSRLTFLHLGANRLQEVPAGINKLTELSYLYLGGNRL--QHVPPELGQLHK 182

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           L+   LSGNQL+  P Q   + +LK L+L +N L  +P+ I +L  L  LSL  N L 
Sbjct: 183 LEALVLSGNQLQYLPSQFKGLMSLKSLHLHDNQLQTLPQSIVRLKNLQELSLRNNPLV 240


>gi|110347495|ref|NP_796067.2| leucine-rich repeat-containing protein 58 [Mus musculus]
 gi|123791296|sp|Q3UGP9.1|LRC58_MOUSE RecName: Full=Leucine-rich repeat-containing protein 58
 gi|74190724|dbj|BAE28158.1| unnamed protein product [Mus musculus]
 gi|187954355|gb|AAI41008.1| Leucine rich repeat containing 58 [Mus musculus]
          Length = 366

 Score =  236 bits (603), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 145/343 (42%), Positives = 200/343 (58%), Gaps = 34/343 (9%)

Query: 27  LDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDN-ASKFTNLRSLD 85
           L++S  S+ +E L +++E         + E +  LLL +N L+  P      F +L+ LD
Sbjct: 11  LNWSRLSVSAEALESELEARAEERRGAR-EALLRLLLPYNRLTSLPRALGGGFPHLQLLD 69

Query: 86  LSNNRITHL-PQAITNFPLSTLIARNNLLTA-ESLPKDMSN---LKNLKVFNLSGNQLEQ 140
           +S N +T L P+ +T   L TL+ARNN L    SLPK ++     ++L+V NLSGN  ++
Sbjct: 70  VSGNSLTALGPELLTLSGLRTLLARNNRLGGPGSLPKGLAQSPLCRSLQVLNLSGNCFQE 129

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P  +L++  L+ L LG N L  +P EI  L  L  L LGGN + +IP    +L  L  L
Sbjct: 130 LPASLLELRALQTLSLGGNQLQSIPAEIENLRSLECLYLGGNFIKEIPPELANLPSLNYL 189

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
           +L DN+++S+P  +S L                             L+SL LHNN L  L
Sbjct: 190 VLCDNKIQSVPPQLSQL---------------------------HSLRSLSLHNNLLTYL 222

Query: 261 PTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLV 320
           P EI+ L  L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+  I Y+   LP NL+
Sbjct: 223 PREILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRSISYTPYDLPGNLL 282

Query: 321 QYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
           +YL SA +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 283 RYLGSASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 325


>gi|26339974|dbj|BAC33650.1| unnamed protein product [Mus musculus]
          Length = 366

 Score =  234 bits (598), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 144/343 (41%), Positives = 200/343 (58%), Gaps = 34/343 (9%)

Query: 27  LDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDN-ASKFTNLRSLD 85
           L++S  S+ +E L +++E         + E +  LLL +N L+  P      F +L+ LD
Sbjct: 11  LNWSRLSVSAEALESELEARAEERRGAR-EALLRLLLPYNRLTSLPRALGGGFPHLQLLD 69

Query: 86  LSNNRITHL-PQAITNFPLSTLIARNNLLTA-ESLPKDMSN---LKNLKVFNLSGNQLEQ 140
           +S N +T L P+ +T   L TL+ARNN L    SLPK ++     ++L+V NLSG+  ++
Sbjct: 70  VSGNSLTALGPELLTLSGLRTLLARNNRLGGPGSLPKGLAQSPLCRSLQVLNLSGSCFQE 129

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P  +L++  L+ L LG N L  +P EI  L  L  L LGGN + +IP    +L  L  L
Sbjct: 130 LPASLLELRALQTLSLGGNQLQSIPAEIENLRSLECLYLGGNFIKEIPPELANLPSLNYL 189

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
           +L DN+++S+P  +S L                             L+SL LHNN L  L
Sbjct: 190 VLCDNKIQSVPPQLSQL---------------------------HSLRSLSLHNNLLTYL 222

Query: 261 PTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLV 320
           P EI+ L  L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+  I Y+   LP NL+
Sbjct: 223 PREILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRSISYTPYDLPGNLL 282

Query: 321 QYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
           +YL SA +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 283 RYLGSASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 325


>gi|431919714|gb|ELK18071.1| Leucine-rich repeat-containing protein 58 [Pteropus alecto]
          Length = 389

 Score =  234 bits (597), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 146/347 (42%), Positives = 208/347 (59%), Gaps = 14/347 (4%)

Query: 27  LDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDN-ASKFTNLRSLD 85
           L+ S  S+  ETL +++E         + E +  LLL HN L   P    S F +L+ LD
Sbjct: 9   LNLSRLSMSPETLESELESRGEERRGAR-EAVLRLLLPHNRLVSLPRALGSGFPHLQLLD 67

Query: 86  LSNNRITHL-PQAITNFPLSTLIARNNLLTAE-SLPKDMSNL---KNLKVFNLSGNQLEQ 140
           +S N +T L P+ +    L TL+A+NN L    +LPK ++     ++L+V NLSGN  ++
Sbjct: 68  VSGNALTALGPELLALRGLRTLLAKNNRLGGPGALPKGLAQSPLSRSLQVLNLSGNCFQE 127

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL---TDIPDTFGDLYQL 197
            P  +L++  L+ L LG N L  +P EI  L  L  +    +S+   T  P  +     L
Sbjct: 128 VPASVLELRALQTLSLGGNQLQSIPAEIENLQSLRQVPKDDSSIFASTFEPIMYFKSPCL 187

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
           E L L  N ++ +P  ++NL  L  L+L +NK++++P ++  L      L+SL LHNN L
Sbjct: 188 ECLYLGGNFIKEIPPELANLPSLNYLVLCDNKIQSVPPQLSQL----HSLRSLSLHNNLL 243

Query: 258 RTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQ 317
             LP EI+ L  L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+  I Y+   LP+
Sbjct: 244 TYLPREILNLVHLEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRNISYTPCDLPE 303

Query: 318 NLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLC 364
           NL++YL  A +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YLC
Sbjct: 304 NLLRYLSLASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYLC 350


>gi|332164692|ref|NP_001193689.1| leucine-rich repeat-containing protein 58 [Bos taurus]
 gi|296491391|tpg|DAA33454.1| TPA: LRRC58 protein-like [Bos taurus]
          Length = 371

 Score =  233 bits (595), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 145/354 (40%), Positives = 199/354 (56%), Gaps = 34/354 (9%)

Query: 16  SDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDN- 74
             +  T     L+ S  S+  ETL +++E         + E +  LLL HN L   P   
Sbjct: 5   GGAVATAGEAELNLSRLSVSLETLESELEARGEERRGAR-EALLRLLLPHNRLVSLPRAL 63

Query: 75  ASKFTNLRSLDLSNNRITHL-PQAITNFPLSTLIARNNLLTA-ESLPKDMSN---LKNLK 129
            S F +L+ LD+S N +T L P+ +    L TL+A+NN L    + PK ++     ++L+
Sbjct: 64  GSGFPHLQLLDVSGNALTALGPELLALRGLRTLLAKNNRLGGPGAFPKGLAQSPLCRSLQ 123

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
           V NLSGN  ++ P  +L++  L+ L LG N L  +P EI  L  L  L LGGN + +IP 
Sbjct: 124 VLNLSGNCFQEVPTSLLELRALQTLSLGGNQLQSIPAEIENLRSLECLYLGGNFIKEIPP 183

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
             G+L  L  L+L DN+++S+P  +S L                             L+S
Sbjct: 184 ELGNLPSLNYLVLCDNKIQSVPPQLSQL---------------------------HSLRS 216

Query: 250 LLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEID 309
           L LHNN L  LP EI+ L  L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+  I 
Sbjct: 217 LSLHNNLLTYLPREILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRNIS 276

Query: 310 YSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
           Y+   LP NL++YL  A +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 277 YTPYDLPGNLLRYLSLASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 330


>gi|417410472|gb|JAA51709.1| Putative leucine-rich repeat-containing protein 58, partial
           [Desmodus rotundus]
          Length = 409

 Score =  233 bits (594), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 142/352 (40%), Positives = 198/352 (56%), Gaps = 32/352 (9%)

Query: 18  SFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASK 77
           +  T     L+ S  S+  ETL +++E   +     +   +  LL Y+  +S        
Sbjct: 45  AVTTTGEAELNLSRLSVSPETLESELESRGDGRRGAREALLRLLLPYNRLVSLPRALGRG 104

Query: 78  FTNLRSLDLSNNRITHL-PQAITNFPLSTLIARNNLLTAE-SLPKDMSNL---KNLKVFN 132
           F++L+ LD+S N +T L P+ +    L TL+A+NN L    +LPK ++     ++L+V N
Sbjct: 105 FSHLQLLDVSGNALTALGPELLALRGLRTLLAKNNRLGGPCALPKGLAQSPLSRSLQVLN 164

Query: 133 LSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFG 192
           LSGN  +  P  +L++  L+ L LG N L  +P EI  L  L  L LGGN + +IP    
Sbjct: 165 LSGNCFQVVPPSVLELRALQTLCLGGNQLQTIPAEIENLRSLECLYLGGNFIKEIPPELA 224

Query: 193 DLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLL 252
           +L  L  L+L DN+++S+P  +S L                             L+SL L
Sbjct: 225 NLPSLTYLVLCDNKIQSVPPQLSQL---------------------------HSLRSLSL 257

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQ 312
           HNN L  LP EI+ L  L ELSLR NPLV+RFV D+TY PPSLLELA+RT+K+  I Y+ 
Sbjct: 258 HNNLLTYLPREILNLIHLEELSLRGNPLVVRFVRDLTYDPPSLLELAARTIKIRNISYTP 317

Query: 313 EHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLC 364
             LP NL++YL  A +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YLC
Sbjct: 318 CDLPGNLLRYLSLASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYLC 369


>gi|426217522|ref|XP_004003002.1| PREDICTED: leucine-rich repeat-containing protein 58 [Ovis aries]
          Length = 371

 Score =  233 bits (593), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 146/354 (41%), Positives = 199/354 (56%), Gaps = 34/354 (9%)

Query: 16  SDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDN- 74
             +  T     L+ S  S+  ETL +++E         + E +  LLL HN L   P   
Sbjct: 5   GAAVATAGEAELNLSRLSVSLETLESELEARGEERRGAR-EALLRLLLPHNRLVSLPRAL 63

Query: 75  ASKFTNLRSLDLSNNRITHL-PQAITNFPLSTLIARNNLLTA-ESLPKDMSN---LKNLK 129
            S F +L+ LD+S N +T L P+ +    L TL+A+NN L    +LPK ++      +L+
Sbjct: 64  GSGFPHLQLLDVSGNALTALGPELLALRGLRTLLAKNNRLGGPGALPKGLAQSPLCCSLQ 123

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
           V NLSGN  ++ P  +L++  L+ L LG N L  +P EI  L  L  L LGGN + +IP 
Sbjct: 124 VLNLSGNCFQEVPTSLLELRALQTLSLGGNQLQSIPAEIENLRSLECLYLGGNFIKEIPP 183

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
             G+L  L  L+L DN+++S+P  +S L                             L+S
Sbjct: 184 ELGNLPSLNYLVLCDNKIQSVPPQLSQL---------------------------HSLRS 216

Query: 250 LLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEID 309
           L LHNN L  LP EI+ L  L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+  I 
Sbjct: 217 LSLHNNLLTYLPREILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRNIS 276

Query: 310 YSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
           Y+   LP NL++YL  A +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 277 YTPYDLPGNLLRYLSLASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 330


>gi|126325849|ref|XP_001370709.1| PREDICTED: leucine-rich repeat-containing protein 58 [Monodelphis
           domestica]
          Length = 468

 Score =  232 bits (592), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/343 (41%), Positives = 193/343 (56%), Gaps = 35/343 (10%)

Query: 27  LDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDN-ASKFTNLRSLD 85
           L+ S   +  E LA ++E+    +  +       LLL HN L   P    + F  L+ LD
Sbjct: 114 LNLSRLGVSPEALALELEV--RAEERRGSRETQRLLLPHNRLVSLPRTLGASFPQLQLLD 171

Query: 86  LSNNRITHL-PQAITNFPLSTLIARNNLLTAE-SLPKDMSN---LKNLKVFNLSGNQLEQ 140
           +S N +  L P+ +    L TL+A+NN L    SLPK ++     + L+V NLSGN  ++
Sbjct: 172 VSGNGLVALGPELLALRCLRTLLAKNNRLGGPGSLPKGLAQAPLCRTLQVLNLSGNCFQE 231

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P  +L++  L+ L LG N L+ +P EI  L  L  L LGGN + +IP    +L  L  L
Sbjct: 232 LPPALLEMRALQTLSLGGNQLHTIPPEIENLRSLEFLYLGGNFIREIPPELANLPSLNHL 291

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
           +L DN+++S+P  ++ L                             L+SL LHNN L  L
Sbjct: 292 VLCDNKIQSVPPQLAQLN---------------------------SLRSLSLHNNLLTYL 324

Query: 261 PTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLV 320
           P EI++L  L ELSLR NPLV+RFV D+TY PP+LLELA RT+K   I Y+   LP NLV
Sbjct: 325 PREILSLVHLQELSLRGNPLVVRFVRDLTYDPPTLLELAGRTIKTRNIAYTPCDLPGNLV 384

Query: 321 QYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
           +YL+ A +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 385 RYLDLASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 427


>gi|345492792|ref|XP_001601918.2| PREDICTED: leucine-rich repeat-containing protein 58-like [Nasonia
           vitripennis]
          Length = 185

 Score =  232 bits (591), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 125/214 (58%), Positives = 150/214 (70%), Gaps = 29/214 (13%)

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           +GGN L ++P T G L  L+ALIL DN LESLP+SI+NLK LKSLLLH N+LRTLPTEII
Sbjct: 1   MGGNRLAEVPSTLGQLTALQALILCDNMLESLPSSIANLKNLKSLLLHKNRLRTLPTEII 60

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLEL 298
           TL                           KCL+ELSLRDNPLV+RFVSDM +  PSLLEL
Sbjct: 61  TL---------------------------KCLTELSLRDNPLVVRFVSDMAHNTPSLLEL 93

Query: 299 ASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIP 358
           A+R +K +EI Y +E LP+NL+ YL S H CVN +CKGVFFDNR+EH+KFVDFCGKYR+P
Sbjct: 94  AARVVKTNEIPYREEDLPRNLIDYLNSGHRCVNNRCKGVFFDNRVEHVKFVDFCGKYRLP 153

Query: 359 LLQYLCSSRCITNSPNVMYGDVKNEDMMKKVLLG 392
           LLQYLCSS+CI         +  +  M++KVLLG
Sbjct: 154 LLQYLCSSKCIGTREG--EEEAVSGAMIRKVLLG 185


>gi|395844881|ref|XP_003795178.1| PREDICTED: leucine-rich repeat-containing protein 58 [Otolemur
           garnettii]
          Length = 505

 Score =  231 bits (588), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 143/352 (40%), Positives = 200/352 (56%), Gaps = 34/352 (9%)

Query: 18  SFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDN-AS 76
           +  T     L++S  S+  ETL +++E         + E +  LLL HN L+  P    +
Sbjct: 141 AVATAGEAELNWSRLSVSPETLESELEARGEERRGAR-EALLRLLLPHNRLASLPRALGT 199

Query: 77  KFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAES-LPKDMSN---LKNLKVF 131
            F +L+ LD+S N +T L   + +   L TL+A+NN L   S LPK ++     ++L+V 
Sbjct: 200 GFQHLQLLDVSGNALTTLGSELLSLRGLRTLLAKNNRLGGPSALPKGLAQSPLCRSLQVL 259

Query: 132 NLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTF 191
           NLSGN  ++ P  +L++  L+ L +G N L  +P EI  L  L  L LGGN + +IP   
Sbjct: 260 NLSGNCFQEMPASLLELRALQTLSMGGNQLQSIPAEIENLRSLESLYLGGNFIKEIPPEL 319

Query: 192 GDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLL 251
            +L  L  L+L DN+++S+P  +S L                             L+SL 
Sbjct: 320 ANLPFLTYLVLCDNKIQSVPPQLSQL---------------------------HSLRSLS 352

Query: 252 LHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYS 311
           LHNN L  LP EI+ L  L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+  I Y+
Sbjct: 353 LHNNLLTYLPREILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRNISYT 412

Query: 312 QEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
              LP NL++YL  A +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 413 PYDLPGNLLRYLGLATNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 464


>gi|74002851|ref|XP_545123.2| PREDICTED: leucine-rich repeat-containing protein 58 [Canis lupus
           familiaris]
          Length = 366

 Score =  230 bits (587), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 143/343 (41%), Positives = 197/343 (57%), Gaps = 34/343 (9%)

Query: 27  LDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDN-ASKFTNLRSLD 85
           L+ S  +L  ETL +++E         + E +  LLL H+ L+  P    S F +L+ LD
Sbjct: 11  LNLSRLTLSPETLESELEARGEERRGAR-EALLRLLLPHSRLASLPRALGSGFPHLQLLD 69

Query: 86  LSNNRITHL-PQAITNFPLSTLIARNNLLTAE-SLPKDMSN---LKNLKVFNLSGNQLEQ 140
           +S N +T L P+ +    L TL+A+NN L    +LPK ++     ++L+V NLSGN  ++
Sbjct: 70  VSGNALTALGPELLALSGLRTLLAKNNRLGGPGALPKGLARSPLCRSLQVLNLSGNCFQE 129

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P  +L +  L+ L LG N L  +P EI  L  L  L LGGN + +IP    +L  L  L
Sbjct: 130 VPASLLQLRALQTLSLGGNQLQSIPAEIENLRSLECLYLGGNFIKEIPPELANLPSLSYL 189

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
           +L DN+++S+P  +S L                             L+SL LHNN L  L
Sbjct: 190 VLCDNKIQSVPPQLSQL---------------------------HSLRSLSLHNNLLTYL 222

Query: 261 PTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLV 320
           P EI+ L  L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+  I Y+   LP NL+
Sbjct: 223 PREILNLVHLEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRNISYTPYDLPGNLL 282

Query: 321 QYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
           +YL  A +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 283 RYLSLASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 325


>gi|440897634|gb|ELR49279.1| Leucine-rich repeat-containing protein 58, partial [Bos grunniens
           mutus]
          Length = 321

 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 137/307 (44%), Positives = 181/307 (58%), Gaps = 31/307 (10%)

Query: 61  LLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHL-PQAITNFPLSTLIARNNLLTAE-S 117
           LLL HN L   P    S F +L+ LD+S N +T L P+ +    L TL+A+NN L    +
Sbjct: 1   LLLPHNRLVSLPRALGSGFPHLQLLDVSGNALTALGPELLALRGLRTLLAKNNRLGGPGA 60

Query: 118 LPKDMSNL-KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            P   S L ++L+V NLSGN  ++ P  +L++  L+ L LG N L  +P EI  L  L  
Sbjct: 61  FPLAQSPLCRSLQVLNLSGNCFQEVPTSLLELRALQTLSLGGNQLQSIPAEIENLRSLEC 120

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L LGGN + +IP   G+L  L  L+L DN+++S+P  +S L                   
Sbjct: 121 LYLGGNFIKEIPPELGNLPSLNYLVLCDNKIQSVPPQLSQL------------------- 161

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
                     L+SL LHNN L  LP EI+ L  L ELSLR NPLV+RFV D+TY PP+LL
Sbjct: 162 --------HSLRSLSLHNNLLTYLPREILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLL 213

Query: 297 ELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYR 356
           ELA+RT+K+  I Y+   LP NL++YL  A +C NPKC GV+FD  +  IKFVDFCGKYR
Sbjct: 214 ELAARTIKIRNISYTPYDLPGNLLRYLSLASNCPNPKCGGVYFDCCVRQIKFVDFCGKYR 273

Query: 357 IPLLQYL 363
           +PL+ YL
Sbjct: 274 LPLMHYL 280


>gi|221118848|ref|XP_002163374.1| PREDICTED: leucine-rich repeat-containing protein 58-like [Hydra
           magnipapillata]
          Length = 345

 Score =  227 bits (579), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 139/338 (41%), Positives = 190/338 (56%), Gaps = 34/338 (10%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P NI  L+L +N+L   P + S   NL+ LD S+N+I+ +   I     ++ L  RNN L
Sbjct: 33  PINIRKLVLRNNSLKELPSSISDLCNLQELDASSNQISWISGEIFCLKQINKLELRNNQL 92

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
             ++LPK+  N  +LK+ NL GN     P  I ++  L+ L+LG N +  +P +I KL +
Sbjct: 93  --QTLPKEFENCSSLKILNLGGNLFTDIPPPIFNLKGLQKLFLGGNKIAVLPPQIEKLTR 150

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L VL LGGN L  +    G L  L+ L+L DNQLE +P     LK L+SL LH N L+  
Sbjct: 151 LEVLYLGGNLLKTVCPNLGKLKHLKQLVLCDNQLEVIPQEFGFLKSLESLSLHQNYLK-- 208

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPP 293
                                    TLP  I++L  L EL+LRDNPLV  F+  + + PP
Sbjct: 209 -------------------------TLPMGILSLVNLQELTLRDNPLVNTFIKKLEFNPP 243

Query: 294 SLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCG 353
           +LLE+  R +K  ++ Y+Q  LP+ L  YL SA  CVNPKC GV+FD+R++ IKFVDFCG
Sbjct: 244 TLLEICGRCIKKAKVPYTQHDLPRVLCNYLNSAQCCVNPKCDGVYFDSRVKCIKFVDFCG 303

Query: 354 KYRIPLLQYLCSSRCITNSPNVMYGDVKNEDMMKKVLL 391
           KYR+PL QYLCS  C          D  +  +M+KVLL
Sbjct: 304 KYRLPLEQYLCSP-CDNGDSKF---DAVDSYIMQKVLL 337


>gi|320163430|gb|EFW40329.1| leucine-rich repeat containing protein [Capsaspora owczarzaki ATCC
           30864]
          Length = 511

 Score =  227 bits (578), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 134/306 (43%), Positives = 175/306 (57%), Gaps = 30/306 (9%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L HN LS  P    + T LRSL++SNN I  LP      P L TL   N  LT  ++  +
Sbjct: 92  LSHNQLSELPPELFELTELRSLNISNNPIASLPDTFERLPQLRTLTCNNMALT--TVTDN 149

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +   + L      GNQL++FP+ +  I TLKYLY+G N ++ +P EI++L +L VL LGG
Sbjct: 150 LVRCRQLVSVYFGGNQLKEFPLVLCFITTLKYLYIGANQIHSLPAEISQLSELEVLYLGG 209

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N                       +LE LPA I  LK L  L L +N L  LP EI  L 
Sbjct: 210 N-----------------------KLERLPAQIGLLKKLNVLFLGDNSLVELPVEITDL- 245

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASR 301
              + L +L +H+NKL  LP  ++ L  L ELSLR+NPLV  FV  +   PPSL ELA R
Sbjct: 246 ---DSLMTLNVHSNKLSALPMGLLQLPRLEELSLRNNPLVTDFVRTIPLTPPSLKELAGR 302

Query: 302 TLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQ 361
            +K  EI YS+E LP +LV+ L +   C NP C+GV+F +R E ++FVDFCGKYR+P +Q
Sbjct: 303 VIKNQEIPYSKETLPLDLVELLNTGRVCENPNCRGVYFSDRCESVQFVDFCGKYRVPFMQ 362

Query: 362 YLCSSR 367
           YLCS R
Sbjct: 363 YLCSPR 368


>gi|301758898|ref|XP_002915312.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 58-like [Ailuropoda melanoleuca]
          Length = 432

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/341 (41%), Positives = 193/341 (56%), Gaps = 40/341 (11%)

Query: 27  LDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDN-ASKFTNLRSLD 85
           L+ S  ++  ETL  ++E+        + E +  LLL HN L   P    S F +L+ LD
Sbjct: 87  LNLSRLNVSPETLELELEVRSEERRGAR-EALLRLLLPHNRLVSLPRGLGSGFPHLQLLD 145

Query: 86  LSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSN---LKNLKVFNLSGNQLEQFP 142
           +S N +T L           L+A + L T  +LPK ++     ++L+V NLSGN  ++ P
Sbjct: 146 VSGNALTALG--------PELLALSGLRTLXALPKGLAQSPLCRSLQVLNLSGNCFQEVP 197

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
             +L++  L+ L LG N L  +P EI  L  L  L LGGN + +IP   G+L  L  L+L
Sbjct: 198 ASLLELRALQTLSLGGNQLQSIPAEIENLQSLECLYLGGNFIKEIPPELGNLPSLSYLVL 257

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
            DN+++S+P  +S L                             L+SL LHNN L  LP 
Sbjct: 258 CDNKIQSVPPQLSQL---------------------------HSLRSLSLHNNLLTYLPR 290

Query: 263 EIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQY 322
           EI+ L  L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+  I Y+   LP+NL++Y
Sbjct: 291 EILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRNISYTPYDLPENLLRY 350

Query: 323 LESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
           L  A +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 351 LSLASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 391


>gi|449485462|ref|XP_002187975.2| PREDICTED: leucine-rich repeat-containing protein 58 [Taeniopygia
           guttata]
          Length = 575

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/296 (43%), Positives = 172/296 (58%), Gaps = 32/296 (10%)

Query: 78  FTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE-SLPKDMSN---LKNLKVFN 132
           F  L  LD+S   +T +   + + P L TL+A+NN L    SLPK +      ++L+V N
Sbjct: 71  FPALEVLDVSGTGLTEMGTELLSLPCLHTLLAKNNRLGGPGSLPKGLEQSPLARSLRVLN 130

Query: 133 LSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFG 192
           LSGN+  + P  +L +  L+ L LG N L+ +P +I +L  L  L LGGN +T IP    
Sbjct: 131 LSGNRFSEVPPALLQLRGLRSLSLGGNRLHGIPPDIQELHSLEFLYLGGNFITAIPPELA 190

Query: 193 DLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLL 252
            L  L  L+L DN+++S+P  ++ L                             L+SL L
Sbjct: 191 KLPSLRYLVLCDNKIQSIPPQLAQL---------------------------HSLRSLSL 223

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQ 312
           HNN L  LP EI+ L  L ELSLR NPLV+RFV D+TY PPSL ELA RT+K   + Y+ 
Sbjct: 224 HNNLLTYLPREILNLVHLDELSLRGNPLVVRFVRDLTYNPPSLQELAGRTIKTRNVPYAP 283

Query: 313 EHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRC 368
             LP++LV+YL  A +C NPKC GV+FD+ +  IKFVDFCGKYR+PL+ YLCS  C
Sbjct: 284 SDLPESLVRYLSLASNCPNPKCGGVYFDSCVRQIKFVDFCGKYRLPLMHYLCSPNC 339



 Score =  181 bits (459), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 128/346 (36%), Positives = 180/346 (52%), Gaps = 42/346 (12%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L+L  N +   P   ++  +LRSL L NN +T+LP+ I N   L  L  R N L    + 
Sbjct: 198 LVLCDNKIQSIPPQLAQLHSLRSLSLHNNLLTYLPREILNLVHLDELSLRGNPLVVRFVR 257

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPT--LKYLYLGNNSLN---------HVPREI 168
               N  +L+       +    P    D+P   ++YL L +N  N            R+I
Sbjct: 258 DLTYNPPSLQELAGRTIKTRNVPYAPSDLPESLVRYLSLASNCPNPKCGGVYFDSCVRQI 317

Query: 169 N--------KLCKLHVLSLGGNS--------------LTDIPDTFGD----LYQLEALIL 202
                    +L  +H L     S               +D  D  G     + +LE L L
Sbjct: 318 KFVDFCGKYRLPLMHYLCSPNCSSPFNSASQSSTSRSESDSEDEAGGAAHKMDKLEFLYL 377

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
             N + ++P  ++ L  L+ L+L +NK++++P ++  L      L+SL LHNN L  LP 
Sbjct: 378 GGNFITAIPPELAKLPSLRYLVLCDNKIQSIPPQLAQL----HSLRSLSLHNNLLTYLPR 433

Query: 263 EIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQY 322
           EI+ L  L ELSLR NPLV+RFV D+TY PPSL ELA RT+K   + Y+   LP++LV+Y
Sbjct: 434 EILNLVHLDELSLRGNPLVVRFVRDLTYNPPSLQELAGRTIKTRNVPYAPSDLPESLVRY 493

Query: 323 LESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRC 368
           L  A +C NPKC GV+FD+ +  IKFVDFCGKYR+PL+ YLCS  C
Sbjct: 494 LSLASNCPNPKCGGVYFDSCVRQIKFVDFCGKYRLPLMHYLCSPEC 539



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 44/131 (33%), Positives = 65/131 (49%), Gaps = 3/131 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
            ++  L L  N  S  P    +   LRSL L  NR+  +P  I     L  L    N +T
Sbjct: 124 RSLRVLNLSGNRFSEVPPALLQLRGLRSLSLGGNRLHGIPPDIQELHSLEFLYLGGNFIT 183

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  +P +++ L +L+   L  N+++  P Q+  + +L+ L L NN L ++PREI  L  L
Sbjct: 184 A--IPPELAKLPSLRYLVLCDNKIQSIPPQLAQLHSLRSLSLHNNLLTYLPREILNLVHL 241

Query: 175 HVLSLGGNSLT 185
             LSL GN L 
Sbjct: 242 DELSLRGNPLV 252


>gi|295860527|gb|ADG55440.1| CG32687 [Drosophila melanogaster]
          Length = 198

 Score =  224 bits (570), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 118/225 (52%), Positives = 144/225 (64%), Gaps = 33/225 (14%)

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           LHVLSLGGN ++++P+  G L QL+AL+L DN +E LP SI+ LK LKSLLLH N+LR L
Sbjct: 1   LHVLSLGGNLISEVPEAVGSLNQLQALVLCDNLIEILPTSIARLKNLKSLLLHKNRLRHL 60

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPP 293
           P                            +I+ LK L+ELSLRDNPLV+RFV DM  KPP
Sbjct: 61  P---------------------------KDIVALKNLTELSLRDNPLVVRFVQDMALKPP 93

Query: 294 SLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCG 353
           +LLELA R +K          +P+ L +YL SA+ CVNP CKGVFFDNR+EHIKFVDFCG
Sbjct: 94  TLLELAGRMVKASGQRPGPYDIPRTLAEYLNSANCCVNPNCKGVFFDNRVEHIKFVDFCG 153

Query: 354 KYRIPLLQYLCSSRCI------TNSPNVMYGDVKNEDMMKKVLLG 392
           KYR+PLLQYLCSS+CI          +V      +  MM+KVLLG
Sbjct: 154 KYRVPLLQYLCSSKCIEPEQPAARGLSVPAASASSGFMMRKVLLG 198


>gi|224496046|ref|NP_001139094.1| leucine rich repeat containing 58 [Danio rerio]
          Length = 351

 Score =  223 bits (568), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 147/349 (42%), Positives = 199/349 (57%), Gaps = 36/349 (10%)

Query: 52  NKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARN 110
           + K + I  L L +N L+  P +    +NL  LD+SNN +T +P  I     L T +A+N
Sbjct: 31  DSKRKQIQQLHLTYNRLTLLPTSVCFLSNLEYLDISNNALTVIPDDIMRLKNLKTFVAKN 90

Query: 111 NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
           NLL   S PKD   ++ ++  NLSGN+ E  P Q L + TL+ L LG N L  +P EI  
Sbjct: 91  NLLNECSFPKDFDCIR-VETLNLSGNRFEDIPAQFLKMTTLQSLSLGGNRLKAIPEEIQN 149

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L +L LGGN ++ IP     L  L  L+L DN+++S+P  ++ L  L SL LHNN L
Sbjct: 150 LTSLEMLYLGGNLISSIPPEVAKLTCLRYLVLCDNRIQSVPPQLNKLHSLLSLSLHNNLL 209

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTY 290
             LP EI++           L+H                L ELSLR NPLV+RF+ DMTY
Sbjct: 210 TFLPREILS-----------LVH----------------LQELSLRGNPLVVRFIKDMTY 242

Query: 291 KPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVD 350
            PPSL+ELA RT+K   + +    LP NL+ YL  A  C NPKC GV+FD+ + HIKFVD
Sbjct: 243 DPPSLMELAGRTVKSQNLPFRSCDLPANLIYYLNLASECPNPKCAGVYFDSCVRHIKFVD 302

Query: 351 FCGKYRIPLLQYLCSSRCITNSPNVMYGDVKNE-------DMMKKVLLG 392
           FCGKYR+PL+ YLCS +C +   +    D ++E       D +++VLLG
Sbjct: 303 FCGKYRLPLMHYLCSPQCSSPCSSNPQSDAESEEENSVPADRLQRVLLG 351


>gi|295860529|gb|ADG55441.1| CG32687 [Drosophila melanogaster]
 gi|295860531|gb|ADG55442.1| CG32687 [Drosophila melanogaster]
 gi|295860533|gb|ADG55443.1| CG32687 [Drosophila melanogaster]
 gi|295860535|gb|ADG55444.1| CG32687 [Drosophila melanogaster]
 gi|295860537|gb|ADG55445.1| CG32687 [Drosophila melanogaster]
 gi|295860539|gb|ADG55446.1| CG32687 [Drosophila melanogaster]
 gi|295860541|gb|ADG55447.1| CG32687 [Drosophila melanogaster]
 gi|295860543|gb|ADG55448.1| CG32687 [Drosophila melanogaster]
 gi|295860545|gb|ADG55449.1| CG32687 [Drosophila melanogaster]
 gi|295860547|gb|ADG55450.1| CG32687 [Drosophila melanogaster]
 gi|295860549|gb|ADG55451.1| CG32687 [Drosophila melanogaster]
 gi|295860551|gb|ADG55452.1| CG32687 [Drosophila melanogaster]
 gi|295860553|gb|ADG55453.1| CG32687 [Drosophila melanogaster]
 gi|295860555|gb|ADG55454.1| CG32687 [Drosophila melanogaster]
 gi|295860557|gb|ADG55455.1| CG32687 [Drosophila melanogaster]
 gi|295860559|gb|ADG55456.1| CG32687 [Drosophila melanogaster]
 gi|295860561|gb|ADG55457.1| CG32687 [Drosophila melanogaster]
 gi|295860563|gb|ADG55458.1| CG32687 [Drosophila melanogaster]
 gi|295860565|gb|ADG55459.1| CG32687 [Drosophila melanogaster]
 gi|295860567|gb|ADG55460.1| CG32687 [Drosophila melanogaster]
 gi|295860569|gb|ADG55461.1| CG32687 [Drosophila melanogaster]
 gi|295860571|gb|ADG55462.1| CG32687 [Drosophila melanogaster]
          Length = 198

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 118/225 (52%), Positives = 142/225 (63%), Gaps = 33/225 (14%)

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           LHVLSLGGN ++++P+  G L QL+AL+L DN +E LP SI+ LK LKSLLLH N+LR L
Sbjct: 1   LHVLSLGGNLISEVPEAVGSLNQLQALVLCDNLIEILPTSIARLKNLKSLLLHKNRLRHL 60

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPP 293
           P                            +I+ LK L+ELSLRDNPLV+RFV DM  KPP
Sbjct: 61  P---------------------------KDIVALKNLTELSLRDNPLVVRFVQDMALKPP 93

Query: 294 SLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCG 353
           +LLELA R +K          +P+ L +YL SA+ CVNP CKGVFFDNR+EHIKFVDFCG
Sbjct: 94  TLLELAGRMVKASGQRPGPYDIPRTLAEYLNSANCCVNPNCKGVFFDNRVEHIKFVDFCG 153

Query: 354 KYRIPLLQYLCSSRCITNSPNVMYGDVKNED------MMKKVLLG 392
           KYR+PLLQYLCSS+CI        G            MM+KVLLG
Sbjct: 154 KYRVPLLQYLCSSKCIEPEQPAARGSSVPAASASSGFMMRKVLLG 198


>gi|209867679|gb|ACI90366.1| hypothetical protein [Philodina roseola]
          Length = 451

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 141/340 (41%), Positives = 202/340 (59%), Gaps = 22/340 (6%)

Query: 73  DNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFN 132
           +NAS+  +L + + S N +  L ++I+N    T I  N+     SLP+D+   ++L    
Sbjct: 114 NNASEILDLTNRNFSENNLDDLLKSISNPQKITSIQLNSSALV-SLPQDIERFQSLITVE 172

Query: 133 LSGNQLEQFPIQILDIPTLKYLYLGNNSLN--HVPREINKLCKLHVLSLGGNSLTDIPDT 190
           LS N+L Q P ++  +  LK+L+L NN LN   +P+E  +L +L V++LGGN     P  
Sbjct: 173 LSNNRLGQLPCELAKLKNLKHLHLKNNFLNDFSLPKEFEQLNQLEVINLGGNRFKQFPYQ 232

Query: 191 FGDLYQLEALILSDNQLESLPASISN-------LKMLKSLLLHNNKLRT-----LPTEII 238
              L  L+ + L  NQ+ SLP    N       + +  SLL   N L       L T I 
Sbjct: 233 LFRLTNLKEIYLGSNQIGSLPDFFQNFLNDVIVVFLFLSLLKSGNSLSRWKSYRLLTGID 292

Query: 239 TLKCLSE---KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
            L   ++   +LKSL LHNN    LP++II L  L ELSLR+NPLV+RFV D+TY  PSL
Sbjct: 293 RLDAFADQLTRLKSLSLHNNHFSALPSDIIRLD-LQELSLRNNPLVVRFVRDLTYDVPSL 351

Query: 296 LELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKY 355
            ELA RT+K+H+++Y+   LP++LV+YL +A  C+NPKC+GV+FD   ++IKFVDFCGK+
Sbjct: 352 KELAGRTIKLHQLNYNDRMLPKSLVEYLNNAKSCLNPKCQGVYFDTCHKNIKFVDFCGKF 411

Query: 356 RIPLLQYLCSSRCITNSPNVMYGDVKNEDM---MKKVLLG 392
            +PL+Q+LCS  C + S        K++DM    KKVLLG
Sbjct: 412 YLPLMQFLCSPTCTSTSNASPENSTKSDDMNSKFKKVLLG 451


>gi|295860525|gb|ADG55439.1| CG32687 [Drosophila simulans]
          Length = 198

 Score =  222 bits (565), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 118/225 (52%), Positives = 142/225 (63%), Gaps = 33/225 (14%)

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           LHVLSLGGN ++++P+  G L QL+AL+L DN +E LP SI+ LK LKSLLLH N+LR L
Sbjct: 1   LHVLSLGGNLISEVPEAVGSLNQLQALVLCDNLIEILPTSIARLKNLKSLLLHKNRLRHL 60

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPP 293
           P                            +I+ LK L+ELSLRDNPLV+RFV DM  KPP
Sbjct: 61  P---------------------------KDIVALKNLTELSLRDNPLVVRFVQDMALKPP 93

Query: 294 SLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCG 353
           +LLELA R +K          +P+ L +YL SA+ CVNP CKGVFFDNR+EHIKFVDFCG
Sbjct: 94  TLLELAGRMVKASGQRPGPYDIPRTLAEYLNSANCCVNPNCKGVFFDNRVEHIKFVDFCG 153

Query: 354 KYRIPLLQYLCSSRCITNSPNVMYGDVKNED------MMKKVLLG 392
           KYR+PLLQYLCSS+CI        G            MM+KVLLG
Sbjct: 154 KYRVPLLQYLCSSKCIEPEQPATRGSSVPAASASSGFMMRKVLLG 198


>gi|348566971|ref|XP_003469275.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 58-like [Cavia porcellus]
          Length = 373

 Score =  221 bits (564), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 143/345 (41%), Positives = 193/345 (55%), Gaps = 36/345 (10%)

Query: 27  LDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDN-ASKFTNLRSLD 85
           L++S  S+  ETL +++E         + E +  LLL HN L   P    S F +L+ LD
Sbjct: 16  LNWSRLSVSPETLESELEARGEERRGSR-EALLRLLLPHNRLVSLPRALGSGFPHLQLLD 74

Query: 86  LSNNRITHL-PQAITNFPLSTLIARNNLLTAE-SLPKDMSNL---KNLKVFNLSGNQLEQ 140
           +S N +T L P+ +    L TL+ARNN L    +LPK ++     + L+V NLSGN  ++
Sbjct: 75  VSGNALTALGPELLALSGLRTLLARNNGLGGPGALPKALAQSPLSRILQVSNLSGNCSQR 134

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCK--LHVLSLGGNSLTDIPDTFGDLYQLE 198
            P  +  +  L  L LG N    +P EI  L    L  L LGGN + +IP    +L  L 
Sbjct: 135 VPASLRGLGALHTLSLGGNKXKSIPPEIENLKSXVLECLYLGGNFIKEIPPELANLPSLN 194

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L+L DN+++S+P  +S L                             L+SL LHNN L 
Sbjct: 195 YLVLCDNKIQSVPPQLSQL---------------------------HSLRSLSLHNNLLT 227

Query: 259 TLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQN 318
            LP EI+ L  L ELSLR NPLV+R V D+TY PP+LLELA+RT+K+  I Y+   LP N
Sbjct: 228 YLPREILNLIHLEELSLRGNPLVVRIVRDLTYNPPTLLELAARTIKMRNISYTPYDLPGN 287

Query: 319 LVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
           L++YL SA +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 288 LLKYLSSASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 332


>gi|241597918|ref|XP_002404826.1| leucine rich domain-containing protein, putative [Ixodes
           scapularis]
 gi|215502391|gb|EEC11885.1| leucine rich domain-containing protein, putative [Ixodes
           scapularis]
          Length = 339

 Score =  219 bits (559), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 136/358 (37%), Positives = 190/358 (53%), Gaps = 43/358 (12%)

Query: 2   SYNYGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTL 61
           ++  GS   +D    D       + LD S   LD+ T  T + LL +         +   
Sbjct: 8   AWGAGSELPADLQAPDG-----PEVLDLSRQGLDAPTADTNLALLDDT------ARVRVA 56

Query: 62  LLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPK 120
            L HN L   PD     + L +LD+S+NR+  LP+ +   P L  L+A  N L    LPK
Sbjct: 57  RLQHNLLERLPDRVGALSRLHTLDVSHNRLGALPEELGALPALRVLLAAGNRL--RYLPK 114

Query: 121 DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
            ++ L +L+V NLSGN L+  P  +L + +L+ LYLG N L  VP +I KL KL VL LG
Sbjct: 115 ALAGLADLEVVNLSGNSLDALPPPLLALGSLRALYLGANRLECVPEDIGKLQKLEVLYLG 174

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           GN L ++P   G L QL++L+LS N+L +LP S+S L  L+SL LH+N L TLP      
Sbjct: 175 GNRLQELPAGLGSLGQLQSLVLSGNRLVALPPSLSCLHRLRSLALHDNLLTTLPP----- 229

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELAS 300
            CL                     + L+ L ELSLR NPLV+RFV D+TY+PP L ELA+
Sbjct: 230 -CL---------------------VRLQNLVELSLRGNPLVVRFVRDLTYEPPRLRELAA 267

Query: 301 RTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIP 358
           R +K+H +   +  LP  L+ YL++A  CVNP+CK    +    +   VD   +  +P
Sbjct: 268 RCVKIHRLPCGEGELPPALLAYLDTARRCVNPRCKA--SERHGSYTSLVDVARRGWLP 323


>gi|260832414|ref|XP_002611152.1| hypothetical protein BRAFLDRAFT_88449 [Branchiostoma floridae]
 gi|229296523|gb|EEN67162.1| hypothetical protein BRAFLDRAFT_88449 [Branchiostoma floridae]
          Length = 575

 Score =  219 bits (558), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/378 (36%), Positives = 195/378 (51%), Gaps = 74/378 (19%)

Query: 74  NASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIAR--NNLLTAESLPKDMSNLKNLKVF 131
           N   ++ L  L L  N+I  LP  + +  LS L+    N L  +            L+V 
Sbjct: 213 NVLFYSRLEVLYLGGNQIFSLPVEVGSVYLSLLVCNFCNVLFYSR-----------LEVL 261

Query: 132 NLSGNQLEQFPIQILDI---------------PTLKYLYLGNNSLNHVPREINKL----- 171
            L GNQ+   P+++  +                 L+ LYLG N +  +P E+  +     
Sbjct: 262 YLGGNQIFSLPVEVGSVYLSLLVCNFCNVLFYSRLEVLYLGGNQIFSLPVEVGSVYLSLL 321

Query: 172 ----C------KLHVLSLGGNSLTDIPDTFGDLY---------------QLEALILSDNQ 206
               C      +L VL LGGN +  +P   G +Y               +LE L L  NQ
Sbjct: 322 VCNFCNVLFYSRLEVLYLGGNQIFSLPVEVGSVYLSLLVCNFCNVLFYSRLEVLYLGGNQ 381

Query: 207 LESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIIT 266
           + SLP  +  L  L+SL+L +N+L ++P ++  L+     L+SL LH+N++  LP+EII 
Sbjct: 382 ISSLPVEVGCLSSLQSLVLCDNRLESIPPQLARLR----NLRSLSLHDNRIAALPSEIIA 437

Query: 267 LKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESA 326
           L+ L+ELSLR NPLV+ FV D+T+ PP+LLELA R ++   I Y    +P NL +YL  A
Sbjct: 438 LRNLTELSLRGNPLVVNFVRDLTFDPPTLLELAGRAVRSAGIPYGDADVPPNLSRYLSLA 497

Query: 327 HHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCITNSPNVMYGDVKNE--- 383
             C NPKC GV+FD R++ IKFVDFCGKYR+PL QYLCS RC   SP  +   V +    
Sbjct: 498 RKCPNPKCTGVYFDARVKQIKFVDFCGKYRLPLQQYLCSPRCSAPSPVTIATPVTSSESE 557

Query: 384 ---------DMMKKVLLG 392
                    D +KKVLLG
Sbjct: 558 SEEEGTVPPDKIKKVLLG 575



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/273 (32%), Positives = 137/273 (50%), Gaps = 45/273 (16%)

Query: 27  LDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           +D +YS LD         L P +  ++K + I +L L +N +   P   S F  LR LD+
Sbjct: 13  VDLAYSDLD---------LFPEH-LSEKADRIRSLHLNNNRILVLPRAVSLFRELRHLDI 62

Query: 87  SNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI 145
           S N +TH+   +T  P L T IA+NNLL   +LPK++    +L+V NLSGN+  +FP QI
Sbjct: 63  SANGLTHVSGELTRLPNLKTFIAKNNLLEDGALPKELDQCLSLEVLNLSGNRFTEFPGQI 122

Query: 146 LDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLY--------QL 197
             +  L+ LYLG N L  VP EI  + +L VL L G+ ++ +      LY        +L
Sbjct: 123 AGMAGLRVLYLGANRLQTVPSEIKHMSRLEVLYLRGSQISSLLAGVWSLYCLYVLLYSRL 182

Query: 198 EALILSDNQLESLPASISNLKM---------------LKSLLLHNNKLRTLPTEIIT--- 239
           E L L  NQ+ SLP  + ++ +               L+ L L  N++ +LP E+ +   
Sbjct: 183 EVLYLGGNQIFSLPVEVGSVYLSLLVCNFCNVLFYSRLEVLYLGGNQIFSLPVEVGSVYL 242

Query: 240 --LKC------LSEKLKSLLLHNNKLRTLPTEI 264
             L C         +L+ L L  N++ +LP E+
Sbjct: 243 SLLVCNFCNVLFYSRLEVLYLGGNQIFSLPVEV 275



 Score = 47.0 bits (110), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 63/130 (48%), Gaps = 6/130 (4%)

Query: 151 LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLE-- 208
           ++ L+L NN +  +PR ++   +L  L +  N LT +      L  L+  I  +N LE  
Sbjct: 34  IRSLHLNNNRILVLPRAVSLFRELRHLDISANGLTHVSGELTRLPNLKTFIAKNNLLEDG 93

Query: 209 SLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLK 268
           +LP  +     L+ L L  N+    P +I  +      L+ L L  N+L+T+P+EI  + 
Sbjct: 94  ALPKELDQCLSLEVLNLSGNRFTEFPGQIAGMA----GLRVLYLGANRLQTVPSEIKHMS 149

Query: 269 CLSELSLRDN 278
            L  L LR +
Sbjct: 150 RLEVLYLRGS 159


>gi|195997161|ref|XP_002108449.1| hypothetical protein TRIADDRAFT_15826 [Trichoplax adhaerens]
 gi|190589225|gb|EDV29247.1| hypothetical protein TRIADDRAFT_15826, partial [Trichoplax
           adhaerens]
          Length = 249

 Score =  216 bits (549), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/278 (43%), Positives = 166/278 (59%), Gaps = 32/278 (11%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LPK+   L NL+   LSGNQ + FP QI  +  L+ LY G N L  VP+ I  L +L +L
Sbjct: 1   LPKEFDQLINLEKLYLSGNQFKTFPSQICHLTRLRTLYFGGNRLETVPQSIINLKRLEIL 60

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            LGGN LT +P   G L  L AL+L DN+L+ +P ++S L                    
Sbjct: 61  YLGGNQLTQVPAELGALDCLRALMLCDNKLKIIPVALSKL-------------------- 100

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLE 297
                   KL+SL LHNN+L TLP EII L  LS+LSLR+NPLV +F+ ++ Y+ P+L E
Sbjct: 101 -------TKLRSLSLHNNQLTTLPVEIIHLVHLSDLSLRNNPLVFQFIQELEYEVPTLKE 153

Query: 298 LASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRI 357
           L+ R ++  +I Y Q  LPQ LV++L+SA  C  PKC+GV+FD R++ +KF DFCGKYR+
Sbjct: 154 LSGRIIRNSKIPYRQLPLPQCLVKFLDSARRC--PKCRGVYFDTRVKEVKFADFCGKYRL 211

Query: 358 PLLQYLCSSRCITNS---PNVMYGDVKNEDMMKKVLLG 392
           PLL+YLCS  C + +    +    +      M++VLLG
Sbjct: 212 PLLRYLCSPPCQSGNSSDYSSEEEEAAQRQKMQRVLLG 249



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 82/185 (44%), Gaps = 31/185 (16%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           N++ L L  N    FP      T LR+L    NR+  +PQ+I                  
Sbjct: 10  NLEKLYLSGNQFKTFPSQICHLTRLRTLYFGGNRLETVPQSII----------------- 52

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
                  NLK L++  L GNQL Q P ++  +  L+ L L +N L  +P  ++KL KL  
Sbjct: 53  -------NLKRLEILYLGGNQLTQVPAELGALDCLRALMLCDNKLKIIPVALSKLTKLRS 105

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQL-----ESLPASISNLKMLKSLLLHNNKL- 230
           LSL  N LT +P     L  L  L L +N L     + L   +  LK L   ++ N+K+ 
Sbjct: 106 LSLHNNQLTTLPVEIIHLVHLSDLSLRNNPLVFQFIQELEYEVPTLKELSGRIIRNSKIP 165

Query: 231 -RTLP 234
            R LP
Sbjct: 166 YRQLP 170



 Score = 38.1 bits (87), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 34/95 (35%), Positives = 47/95 (49%), Gaps = 5/95 (5%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           +  L+L  N L   P   SK T LRSL L NN++T LP  I +   LS L  RNN L  +
Sbjct: 80  LRALMLCDNKLKIIPVALSKLTKLRSLSLHNNQLTTLPVEIIHLVHLSDLSLRNNPLVFQ 139

Query: 117 SLPKDMSNLKNLKVFNLSGNQLE--QFPIQILDIP 149
            + +    +  LK   LSG  +   + P + L +P
Sbjct: 140 FIQELEYEVPTLK--ELSGRIIRNSKIPYRQLPLP 172


>gi|363728426|ref|XP_416555.3| PREDICTED: leucine-rich repeat-containing protein 58 [Gallus
           gallus]
          Length = 337

 Score =  211 bits (538), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 115/257 (44%), Positives = 154/257 (59%), Gaps = 30/257 (11%)

Query: 110 NNLLTAESLPKDMSNL---KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPR 166
           N L    SLPK +      ++L+V NLSGN+  + P  +L +  L+ + LG N L+ +P 
Sbjct: 67  NRLGGPGSLPKALGQAPLSRSLRVLNLSGNRFAELPPALLGLRGLQKISLGGNRLHGIPP 126

Query: 167 EINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLH 226
           +I +L  L  L LGGN +T IP    +L  L +L+L DN+++S+P  ++ L  L+SL LH
Sbjct: 127 DIQELRSLEFLYLGGNFITSIPPELANLPSLSSLVLCDNKIQSIPPQLAQLHSLRSLSLH 186

Query: 227 NNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVS 286
           NN L  LP EI+            L+H                L ELSLR NPLV+RFV 
Sbjct: 187 NNLLTYLPREILN-----------LVH----------------LEELSLRGNPLVVRFVR 219

Query: 287 DMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHI 346
           D+TY PPSL ELA RT+K   + Y+   LP+NLV+YL  A +C NPKC GV+FD+ +  I
Sbjct: 220 DLTYNPPSLQELAGRTIKTRNVPYAPSDLPENLVRYLSLASNCPNPKCGGVYFDSCVRQI 279

Query: 347 KFVDFCGKYRIPLLQYL 363
           KFVDFCGKYRIPL+ YL
Sbjct: 280 KFVDFCGKYRIPLMHYL 296


>gi|344236558|gb|EGV92661.1| Follistatin-related protein 1 [Cricetulus griseus]
          Length = 583

 Score =  210 bits (535), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 113/250 (45%), Positives = 151/250 (60%), Gaps = 27/250 (10%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T E + +    L+  +V NLSGN  ++ P  +L++  L+ L LG N L  +P EI  L +
Sbjct: 320 TQEEMTRYAQELQKHQVLNLSGNCFQEVPASLLELSRLQTLSLGGNQLQSIPAEIENLQR 379

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L LGGN + +IP    +L  L  L+L DN+++S+P  +S L  L+SL LHNN L  L
Sbjct: 380 LECLYLGGNFIKEIPPELANLPSLNYLVLCDNKIQSVPPQLSQLHSLRSLSLHNNLLTYL 439

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPP 293
           P EI+            L+H                L ELSLR NPLV+RFV D+TY PP
Sbjct: 440 PREILN-----------LIH----------------LEELSLRGNPLVVRFVRDLTYDPP 472

Query: 294 SLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCG 353
           +LLELA+RT+K+  I Y+   LP NL++YL SA +C NPKC GV+FD  +  IKFVDFCG
Sbjct: 473 TLLELAARTIKIRSISYTPYDLPGNLLRYLGSASNCPNPKCGGVYFDCCVRQIKFVDFCG 532

Query: 354 KYRIPLLQYL 363
           KYR+PL+ YL
Sbjct: 533 KYRLPLMHYL 542


>gi|326434083|gb|EGD79653.1| leucine rich repeat containing protein 58 [Salpingoeca sp. ATCC
           50818]
          Length = 819

 Score =  210 bits (534), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/310 (39%), Positives = 176/310 (56%), Gaps = 7/310 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           ++ +L L   +L   P   SKF  L   +LSNN++T LP AI + P L+ L   +N L  
Sbjct: 479 SVTSLDLEARSLGHVPAAISKFAFLHFANLSNNQLTDLPDAICSLPCLNHLDVSHNRL-- 536

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLP  +  L+ L   +   NQL   P+ +     L+ LY+  N L+ VP  + ++  L 
Sbjct: 537 RSLPAGIGKLQRLVKLDCRVNQLRDLPLSLEQCTALQTLYVSGNELSAVPAAVVRIPDLR 596

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L +G N++  I     +L QL  L L  N L +LP  +  L+ L+ L L +N+L  LP 
Sbjct: 597 RLYIGSNNIRRIHPDIANLTQLTVLYLGGNLLRALPPELCRLRQLRVLYLGDNRLADLPR 656

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
            +  L  L     +L LH N+LR LP E++ +  L +LSLR NPLV  F  + T  P SL
Sbjct: 657 GMDQLTSLC----TLNLHKNQLRALPPELVHMASLQQLSLRGNPLVTSFALEATRSPLSL 712

Query: 296 LELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKY 355
            E+ +RT+K H I Y  + +PQ L +YL+SA  C NP C+GV+F   I+ ++FVDFCGKY
Sbjct: 713 QEMCARTIKNHSIPYCDKCVPQVLCEYLDSAQRCSNPACQGVYFTQGIKDVQFVDFCGKY 772

Query: 356 RIPLLQYLCS 365
           R+PLL+YLCS
Sbjct: 773 RVPLLKYLCS 782


>gi|354477901|ref|XP_003501156.1| PREDICTED: leucine-rich repeat-containing protein 58-like
           [Cricetulus griseus]
          Length = 281

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 111/238 (46%), Positives = 148/238 (62%), Gaps = 27/238 (11%)

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           ++L+V NLSGN  ++ P  +L++  L+ L LG N L  +P EI  L +L  L LGGN + 
Sbjct: 30  RSLQVLNLSGNCFQEVPASLLELSRLQTLSLGGNQLQSIPAEIENLQRLECLYLGGNFIK 89

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           +IP    +L  L  L+L DN+++S+P  +S L  L+SL LHNN L  LP EI+       
Sbjct: 90  EIPPELANLPSLNYLVLCDNKIQSVPPQLSQLHSLRSLSLHNNLLTYLPREILN------ 143

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKV 305
                L+H                L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+
Sbjct: 144 -----LIH----------------LEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKI 182

Query: 306 HEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
             I Y+   LP NL++YL SA +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 183 RSISYTPYDLPGNLLRYLGSASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 240


>gi|327282243|ref|XP_003225853.1| PREDICTED: leucine-rich repeat-containing protein 58-like [Anolis
           carolinensis]
          Length = 300

 Score =  207 bits (526), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 115/263 (43%), Positives = 153/263 (58%), Gaps = 30/263 (11%)

Query: 104 STLIARNNLLTAESLPKDMSN---LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
           S L   N L    SLPK +++    ++L+  NLSGN+  Q P  +L +  L+ L LG+N 
Sbjct: 24  SMLFKNNRLGGPGSLPKGLASSPLGRSLRALNLSGNRFAQLPPSVLGLRRLRSLSLGSNR 83

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P  I +L  L  L LGGN +T +P    +L  L  L+L DN+++S+P  ++ L  L
Sbjct: 84  LQAIPPAIQELGSLEFLYLGGNFITSVPPELANLPSLSYLVLCDNKIQSIPPQLAQLHSL 143

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +SL LHNN L  LP EI+            L+H                L ELSLR NPL
Sbjct: 144 RSLSLHNNLLTYLPREILN-----------LVH----------------LEELSLRGNPL 176

Query: 281 VIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFD 340
           V+RFV D+TY PPSL ELA RT+K   + Y    LP NL++YL  A +C NPKC GV+FD
Sbjct: 177 VVRFVRDLTYNPPSLQELAGRTIKTRNVPYIPSDLPGNLLRYLNLASNCPNPKCGGVYFD 236

Query: 341 NRIEHIKFVDFCGKYRIPLLQYL 363
           + +  IKFVDFCGKYR+PL+ YL
Sbjct: 237 SCVRQIKFVDFCGKYRVPLMHYL 259



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 67/131 (51%), Gaps = 3/131 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
            ++  L L  N  +  P +      LRSL L +NR+  +P AI     L  L    N +T
Sbjct: 49  RSLRALNLSGNRFAQLPPSVLGLRRLRSLSLGSNRLQAIPPAIQELGSLEFLYLGGNFIT 108

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             S+P +++NL +L    L  N+++  P Q+  + +L+ L L NN L ++PREI  L  L
Sbjct: 109 --SVPPELANLPSLSYLVLCDNKIQSIPPQLAQLHSLRSLSLHNNLLTYLPREILNLVHL 166

Query: 175 HVLSLGGNSLT 185
             LSL GN L 
Sbjct: 167 EELSLRGNPLV 177


>gi|355746445|gb|EHH51059.1| hypothetical protein EGM_10383, partial [Macaca fascicularis]
          Length = 263

 Score =  204 bits (520), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 114/250 (45%), Positives = 152/250 (60%), Gaps = 31/250 (12%)

Query: 117 SLPKDMSN---LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           +LPK ++      +L+V NLSGN  ++ P  +L++  L+ L LG N L  +P EI  L  
Sbjct: 1   ALPKGLAQSPLCGSLQVLNLSGNCFQEVPASLLELRALQTLSLGGNQLQSIPAEIENLQS 60

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L LGGN + +IP   G+L  L  L+L DN+++S+P  +S    L+SL LHNN L  L
Sbjct: 61  LECLYLGGNFIKEIPPELGNLPSLNYLVLCDNKIQSVPPQLSQ-HSLRSLSLHNNLLTYL 119

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPP 293
           P EI+            L+H                L ELSLR NPLV+RFV D+TY PP
Sbjct: 120 PREILN-----------LIH----------------LEELSLRGNPLVVRFVRDLTYDPP 152

Query: 294 SLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCG 353
           +LLELA+RT+K+  I Y+   LP NL++YL SA +C NPKC GV+FD  +  IKFVDFCG
Sbjct: 153 TLLELAARTIKIRNISYTPYDLPGNLLRYLGSASNCPNPKCGGVYFDCCVRQIKFVDFCG 212

Query: 354 KYRIPLLQYL 363
           KYR+PL+ YL
Sbjct: 213 KYRLPLMHYL 222


>gi|355699997|gb|AES01304.1| leucine rich repeat containing 58 [Mustela putorius furo]
          Length = 243

 Score =  204 bits (520), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 109/238 (45%), Positives = 147/238 (61%), Gaps = 27/238 (11%)

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           ++L++ NLSGN  ++ P  +L++  L+ L LG N L  +P EI  L  L  L LGGN + 
Sbjct: 1   RSLQMLNLSGNCFQEVPASLLELRALQTLSLGGNQLQSIPAEIENLQSLECLYLGGNFIR 60

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           +IP    +L  L  L+L DN+++S+P  +S L  L+SL LHNN L  LP EI+       
Sbjct: 61  EIPPELANLPSLSYLVLCDNKIQSVPPQLSQLHSLRSLSLHNNLLTYLPREILN------ 114

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKV 305
                L+H                L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+
Sbjct: 115 -----LIH----------------LEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKI 153

Query: 306 HEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
             I Y+   LP+NL++YL  A +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 154 RNISYTPYDLPENLLRYLSLATNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 211


>gi|313219937|emb|CBY43637.1| unnamed protein product [Oikopleura dioica]
          Length = 312

 Score =  197 bits (501), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 124/335 (37%), Positives = 179/335 (53%), Gaps = 34/335 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L    L   P        ++SLDLS N+I  +P  +++   L TL    N L  +S P  
Sbjct: 7   LAGRELVTLPQRLFSRIGIKSLDLSRNQIHEVPIELSHLLNLKTLNLSKNKLDDKSFPPV 66

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           + NL  L+  NL+GN L + P  ++++P LK L L  N + ++P  + K+  L  L LG 
Sbjct: 67  LENLIFLEELNLAGNNLTEIPSFVMNLPRLKLLKLAENKITYIPSALLKVISLERLYLGD 126

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L+ IP    DL  L  L L++N++ ++P  +  ++ L  L LHNN++           
Sbjct: 127 NQLSSIPPKISDLTNLRLLSLANNKITNVPQQMKEMESLICLQLHNNRI----------- 175

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASR 301
                             LP  I+ L+ L ++SLR NPL+ RFV ++TY PPSLLELA R
Sbjct: 176 ----------------NFLPRGIVELENLEDISLRGNPLINRFVREITYSPPSLLELAGR 219

Query: 302 TLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQ 361
           ++  H+ D S+  LP +L Q L  A  C NP C GV+FDN    IKF DFCG+YR+PLLQ
Sbjct: 220 SVIHHQADTSK--LPSSLKQRLSHAKCCPNPNCDGVYFDNLYRQIKFADFCGRYRMPLLQ 277

Query: 362 YLCSSRCIT----NSPNVMYGDVKNEDMMKKVLLG 392
           +LCS +C+T    +S      +  N   M++VLLG
Sbjct: 278 FLCSPQCMTPETDDSSASTDDESYNPRTMRRVLLG 312



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 52/166 (31%), Positives = 89/166 (53%), Gaps = 12/166 (7%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           +++KTL+ S + LD ++    +E L           ++ L L  NNL+  P        L
Sbjct: 46  LNLKTLNLSKNKLDDKSFPPVLENL---------IFLEELNLAGNNLTEIPSFVMNLPRL 96

Query: 82  RSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           + L L+ N+IT++P A+     L  L   +N L+  S+P  +S+L NL++ +L+ N++  
Sbjct: 97  KLLKLAENKITYIPSALLKVISLERLYLGDNQLS--SIPPKISDLTNLRLLSLANNKITN 154

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
            P Q+ ++ +L  L L NN +N +PR I +L  L  +SL GN L +
Sbjct: 155 VPQQMKEMESLICLQLHNNRINFLPRGIVELENLEDISLRGNPLIN 200



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 40/125 (32%), Positives = 61/125 (48%), Gaps = 14/125 (11%)

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL--RTLPT 235
           SL G  L  +P        +++L LS NQ+  +P  +S+L  LK+L L  NKL  ++ P 
Sbjct: 6   SLAGRELVTLPQRLFSRIGIKSLDLSRNQIHEVPIELSHLLNLKTLNLSKNKLDDKSFPP 65

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
            +  L  L E    L L  N L  +P+ ++ L  L  L L +N         +TY P +L
Sbjct: 66  VLENLIFLEE----LNLAGNNLTEIPSFVMNLPRLKLLKLAEN--------KITYIPSAL 113

Query: 296 LELAS 300
           L++ S
Sbjct: 114 LKVIS 118


>gi|167524890|ref|XP_001746780.1| hypothetical protein [Monosiga brevicollis MX1]
 gi|163774560|gb|EDQ88187.1| predicted protein [Monosiga brevicollis MX1]
          Length = 411

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/310 (39%), Positives = 177/310 (57%), Gaps = 7/310 (2%)

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAI-TNFPLSTLIARNNLLTAESLPKDMSNL 125
           N+S  P   +K T L  LDLSNN +T L ++  T   L+ L   NN L+A  LPK +  L
Sbjct: 48  NISEVPTRVTKATFLHFLDLSNNTLTTLSESFFTLVHLTELNLSNNHLSA--LPKHIGQL 105

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
            NL   +LS N+L   P ++  +  L+ L + NN L  +P  +  L +L  L +G N++T
Sbjct: 106 TNLVKLDLSSNRLTHLPEELTQLTDLETLNVSNNRLATIPAPVLALEQLQKLYIGSNAIT 165

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
            +P     L  LE L L  N L ++  ++  L  L  L L  N+LR L  +I  L     
Sbjct: 166 ALPADIARLKNLEVLYLGGNLLRTVNDNLCQLSRLTLLYLGGNRLRKLSPKIANL----H 221

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKV 305
           +L++L LH+N+L+ LP  I+ ++ L +LSLR+NPLV  FV D+  +P SLLEL +R +K 
Sbjct: 222 RLRTLNLHDNQLQFLPPAIVDMRSLRQLSLRNNPLVTDFVEDVRPEPLSLLELCAREIKR 281

Query: 306 HEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCS 365
           + I Y +  LP  L +YL+SA  C NP C GV+F      ++FVD CGKYR+PL++Y+C+
Sbjct: 282 NGIKYCRHCLPAELCRYLDSAKCCSNPACMGVYFTEGARSVEFVDVCGKYRVPLMKYVCT 341

Query: 366 SRCITNSPNV 375
             C    P+ 
Sbjct: 342 HGCEPRKPHA 351


>gi|344282247|ref|XP_003412885.1| PREDICTED: leucine-rich repeat-containing protein 58-like
           [Loxodonta africana]
          Length = 222

 Score =  181 bits (459), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 94/185 (50%), Positives = 124/185 (67%), Gaps = 4/185 (2%)

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           +GGN L  IP    +L  LE L L  N ++ +P  + NL  L  L+L +NK++++P ++ 
Sbjct: 1   MGGNHLQSIPAKKKNLQSLECLYLGGNFIKEIPPELGNLPSLNYLVLCDNKIQSVPPQLS 60

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLEL 298
            L      L+SL LHNN L  LP EI+ L  L ELSLR NPLV+RFV D+TY PP+LLEL
Sbjct: 61  QL----HSLRSLSLHNNLLTYLPREILNLIQLQELSLRGNPLVVRFVRDLTYDPPTLLEL 116

Query: 299 ASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIP 358
           A+RT+K   I Y+   LP+NL++YL  A +C NPKC GV+FD  +  IKFVDFCGKYR+P
Sbjct: 117 AARTIKTRNISYTPYDLPENLLRYLGLASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLP 176

Query: 359 LLQYL 363
           L+ YL
Sbjct: 177 LMHYL 181



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 33/92 (35%), Positives = 55/92 (59%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           +S+P    NL++L+   L GN +++ P ++ ++P+L YL L +N +  VP ++++L  L 
Sbjct: 7   QSIPAKKKNLQSLECLYLGGNFIKEIPPELGNLPSLNYLVLCDNKIQSVPPQLSQLHSLR 66

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQL 207
            LSL  N LT +P    +L QL+ L L  N L
Sbjct: 67  SLSLHNNLLTYLPREILNLIQLQELSLRGNPL 98



 Score = 40.8 bits (94), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 49/120 (40%), Gaps = 24/120 (20%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNL 125
           N+L   P       +L  L L  N I  +P  + N P                       
Sbjct: 4   NHLQSIPAKKKNLQSLECLYLGGNFIKEIPPELGNLP----------------------- 40

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
            +L    L  N+++  P Q+  + +L+ L L NN L ++PREI  L +L  LSL GN L 
Sbjct: 41  -SLNYLVLCDNKIQSVPPQLSQLHSLRSLSLHNNLLTYLPREILNLIQLQELSLRGNPLV 99


>gi|444727055|gb|ELW67563.1| Leucine-rich repeat-containing protein 58, partial [Tupaia
           chinensis]
          Length = 236

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 97/194 (50%), Positives = 123/194 (63%), Gaps = 25/194 (12%)

Query: 171 LCK-LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           LC+ L VL+L GN   D+P +  +L  L+ L L  NQL+S+PA I NL+ L SL      
Sbjct: 26  LCRSLQVLNLSGNCFQDVPASLLELRALQTLSLGGNQLQSIPAEIENLQRLHSL------ 79

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMT 289
                             +SL LHNN L  LP EI+ L  L ELSLR NPLV+RFV D+T
Sbjct: 80  ------------------RSLSLHNNLLTYLPREILNLIHLEELSLRGNPLVVRFVRDLT 121

Query: 290 YKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFV 349
           Y PP+LLELA+RT+K+  I Y+   LP+NL++YL  A +C NPKC GV+FD  +  IKFV
Sbjct: 122 YDPPTLLELAARTIKIKNISYTPYDLPENLLKYLGLASNCPNPKCGGVYFDCCVRQIKFV 181

Query: 350 DFCGKYRIPLLQYL 363
           DFCGKYR+PL+ YL
Sbjct: 182 DFCGKYRLPLMHYL 195



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 42/112 (37%), Positives = 62/112 (55%), Gaps = 7/112 (6%)

Query: 103 LSTLIARNNLLTAE-SLPKDMSN---LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
           L T+++++N L    +LPK ++     ++L+V NLSGN  +  P  +L++  L+ L LG 
Sbjct: 1   LRTVLSKHNRLGGPGALPKGLAQSPLCRSLQVLNLSGNCFQDVPASLLELRALQTLSLGG 60

Query: 159 NSLNHVPREINKLCKLH---VLSLGGNSLTDIPDTFGDLYQLEALILSDNQL 207
           N L  +P EI  L +LH    LSL  N LT +P    +L  LE L L  N L
Sbjct: 61  NQLQSIPAEIENLQRLHSLRSLSLHNNLLTYLPREILNLIHLEELSLRGNPL 112


>gi|390349226|ref|XP_797077.2| PREDICTED: leucine-rich repeat-containing protein 58-like
           [Strongylocentrotus purpuratus]
          Length = 323

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 118/324 (36%), Positives = 162/324 (50%), Gaps = 72/324 (22%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP 102
           I++ P +D  +  E +  + +  NN++  P + + F N+  LDLS NRI  LP  +    
Sbjct: 31  IDVFPFDDIIEHKERLAIIDVSRNNIATIPASINNFVNIIELDLSTNRIVKLPDELLQLK 90

Query: 103 -LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L  L  +NN L  +SLPKD  +   L+  N SGN    FP+Q+ +I +L+ L++G N +
Sbjct: 91  HLRILTCKNNHLNGDSLPKDFGSCPALQTLNFSGNLFLNFPVQLTEISSLRVLHMGGNRM 150

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +P EI KL +L  L LGGN L  +P   G+L +L +L+L DN+L SLPA +  LK L+
Sbjct: 151 RDIPPEIEKLVRLEHLYLGGNHLVTLPPNVGNLQKLLSLVLCDNRLASLPAELVQLKQLR 210

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           SL LHNN L  LP EIITL                     TE      L ELSLR NP +
Sbjct: 211 SLSLHNNHLTILPPEIITL---------------------TE------LCELSLRGNPPL 243

Query: 282 IRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDN 341
             F          L  L +R                                   V+F+ 
Sbjct: 244 PLFF---------LPTLGTR-----------------------------------VYFNA 259

Query: 342 RIEHIKFVDFCGKYRIPLLQYLCS 365
           R++H+KFVDFCGKYR+PL+QYLCS
Sbjct: 260 RVQHVKFVDFCGKYRLPLMQYLCS 283


>gi|345308579|ref|XP_001510174.2| PREDICTED: leucine-rich repeat-containing protein 58-like
           [Ornithorhynchus anatinus]
          Length = 297

 Score =  178 bits (451), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 91/170 (53%), Positives = 118/170 (69%), Gaps = 4/170 (2%)

Query: 194 LYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLH 253
           L  LE L L  N ++ +P  I+NL  L  L+L +NK++++P ++  L      L+SL LH
Sbjct: 91  LLALEFLYLGGNFIKEIPPEIANLPSLNYLVLCDNKIQSVPPQLAQL----HSLRSLSLH 146

Query: 254 NNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQE 313
           NN L  LP EI++L  L ELSLR NPLV+RFV D+TY PPSLLELA RT+K   I Y+  
Sbjct: 147 NNLLSYLPREILSLVQLQELSLRGNPLVVRFVRDLTYNPPSLLELAGRTIKTRSIAYTPR 206

Query: 314 HLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
            LP+NLV+YL+ A +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 207 DLPENLVRYLDLASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 256



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 7/113 (6%)

Query: 73  DNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFN 132
           + A  F  LRS+     R++    A     L  L    N +  + +P +++NL +L    
Sbjct: 69  EQAFGFQGLRSV-----RVSSRAAADRLLALEFLYLGGNFI--KEIPPEIANLPSLNYLV 121

Query: 133 LSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           L  N+++  P Q+  + +L+ L L NN L+++PREI  L +L  LSL GN L 
Sbjct: 122 LCDNKIQSVPPQLAQLHSLRSLSLHNNLLSYLPREILSLVQLQELSLRGNPLV 174



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 45/80 (56%)

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           L+   L GN +++ P +I ++P+L YL L +N +  VP ++ +L  L  LSL  N L+ +
Sbjct: 94  LEFLYLGGNFIKEIPPEIANLPSLNYLVLCDNKIQSVPPQLAQLHSLRSLSLHNNLLSYL 153

Query: 188 PDTFGDLYQLEALILSDNQL 207
           P     L QL+ L L  N L
Sbjct: 154 PREILSLVQLQELSLRGNPL 173


>gi|157109148|ref|XP_001650546.1| internalin A, putative [Aedes aegypti]
 gi|108879120|gb|EAT43345.1| AAEL005221-PB [Aedes aegypti]
          Length = 263

 Score =  177 bits (450), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 121/242 (50%), Positives = 158/242 (65%), Gaps = 16/242 (6%)

Query: 10  SSDSSDSDSFKTVSIKTLDFSYSS---LDSETLATQIELLPNNDYNKKPENIDTLLLYHN 66
           +SDS DSDS +    KT DF +++   LD +       LL      K  E+I+TLLL HN
Sbjct: 6   TSDSCDSDSREQ---KTADFGHANKRHLDED-------LLRMCKTKKVAEDIETLLLNHN 55

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTAESLPKDM--S 123
           NL   P +  +F NLR LDLSNN +  +P  IT    L+TLIA+NNLL  +SLPK +  +
Sbjct: 56  NLLIVPASIGEFANLRVLDLSNNSLRQIPDEITQQCQLTTLIAKNNLLDDKSLPKTLRSA 115

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           +   LK  NLSGN+   FP Q+ ++ +LKYLYLG N L +V ++I KL  L +LSLGGN 
Sbjct: 116 HGGGLKELNLSGNRFTHFPEQVTELRSLKYLYLGGNQLTNVSKDIWKLHNLQLLSLGGNF 175

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           +T+IPDT G L  L AL+L DN +E+LP+SI+ L  LKSLLLH N+L+ LP EIITLK L
Sbjct: 176 ITEIPDTVGLLNNLHALVLCDNLIEALPSSIARLVHLKSLLLHKNRLKHLPREIITLKNL 235

Query: 244 SE 245
           +E
Sbjct: 236 TE 237


>gi|326912843|ref|XP_003202755.1| PREDICTED: leucine-rich repeat-containing protein 58-like
           [Meleagris gallopavo]
          Length = 236

 Score =  176 bits (446), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 90/167 (53%), Positives = 116/167 (69%), Gaps = 4/167 (2%)

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
           LE L L  N + S+P  ++NL  L SL+L +NK++++P ++  L      L+SL LHNN 
Sbjct: 33  LEFLYLGGNFITSIPPELANLPSLSSLVLCDNKIQSIPPQLAQL----HSLRSLSLHNNL 88

Query: 257 LRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLP 316
           L  LP EI+ L  L ELSLR NPLV+RFV D+TY PPSL ELA RT+K   + Y+   LP
Sbjct: 89  LTYLPREILNLVHLEELSLRGNPLVVRFVRDLTYNPPSLQELAGRTIKTRNVPYAPSDLP 148

Query: 317 QNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
           +NLV+YL  A +C NPKC GV+FD+ +  IKFVDFCGKYRIPL+ YL
Sbjct: 149 ENLVRYLSLASNCPNPKCGGVYFDSCVRQIKFVDFCGKYRIPLMHYL 195



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 33/89 (37%), Positives = 48/89 (53%), Gaps = 2/89 (2%)

Query: 97  AITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL 156
           A T   L  L    N +T  S+P +++NL +L    L  N+++  P Q+  + +L+ L L
Sbjct: 27  ARTTVLLEFLYLGGNFIT--SIPPELANLPSLSSLVLCDNKIQSIPPQLAQLHSLRSLSL 84

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLT 185
            NN L ++PREI  L  L  LSL GN L 
Sbjct: 85  HNNLLTYLPREILNLVHLEELSLRGNPLV 113



 Score = 41.6 bits (96), Expect = 0.60,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 42/80 (52%)

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           L+   L GN +   P ++ ++P+L  L L +N +  +P ++ +L  L  LSL  N LT +
Sbjct: 33  LEFLYLGGNFITSIPPELANLPSLSSLVLCDNKIQSIPPQLAQLHSLRSLSLHNNLLTYL 92

Query: 188 PDTFGDLYQLEALILSDNQL 207
           P    +L  LE L L  N L
Sbjct: 93  PREILNLVHLEELSLRGNPL 112


>gi|395529169|ref|XP_003766691.1| PREDICTED: leucine-rich repeat-containing protein 58-like
           [Sarcophilus harrisii]
          Length = 238

 Score =  172 bits (437), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 88/167 (52%), Positives = 116/167 (69%), Gaps = 4/167 (2%)

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
           LE L L  N ++ +P  ++NL  L  L+L +NK++++P ++  L      L+SL LHNN 
Sbjct: 35  LEFLYLGGNFIKEIPPELANLPYLNYLVLCDNKIQSVPPQLAQLN----SLRSLSLHNNL 90

Query: 257 LRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLP 316
           L  LP EI++L  L ELSLR NPLV+RFV D+TY PP+LLELA RT+K   I Y+   LP
Sbjct: 91  LTYLPREILSLVHLQELSLRGNPLVVRFVRDLTYDPPTLLELAGRTIKTRNISYTPCDLP 150

Query: 317 QNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
            NLV+YL+ A +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 151 GNLVRYLDLASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 197



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 31/89 (34%), Positives = 48/89 (53%)

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P + S  +NL+   L GN +++ P ++ ++P L YL L +N +  VP ++ +L  L  LS
Sbjct: 26  PVEGSPPENLEFLYLGGNFIKEIPPELANLPYLNYLVLCDNKIQSVPPQLAQLNSLRSLS 85

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQL 207
           L  N LT +P     L  L+ L L  N L
Sbjct: 86  LHNNLLTYLPREILSLVHLQELSLRGNPL 114



 Score = 44.3 bits (103), Expect = 0.096,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 40/70 (57%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           + +P +++NL  L    L  N+++  P Q+  + +L+ L L NN L ++PREI  L  L 
Sbjct: 46  KEIPPELANLPYLNYLVLCDNKIQSVPPQLAQLNSLRSLSLHNNLLTYLPREILSLVHLQ 105

Query: 176 VLSLGGNSLT 185
            LSL GN L 
Sbjct: 106 ELSLRGNPLV 115


>gi|189236519|ref|XP_001816079.1| PREDICTED: similar to AGAP004458-PA [Tribolium castaneum]
          Length = 282

 Score =  171 bits (434), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/277 (39%), Positives = 153/277 (55%), Gaps = 62/277 (22%)

Query: 29  FSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSN 88
           F+Y  LDS+ L   ++ L   D  K+ E+I++++L+HN L+  P N SK TN++ L +SN
Sbjct: 7   FAYLLLDSQQLEENLDEL-GKDCAKR-EDIESIILHHNQLTTLPKNLSKVTNVQVLHISN 64

Query: 89  NRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDI 148
           N +  LP     + L+TL+A+NN  + ESLPK  +   +++  NLSGN  E         
Sbjct: 65  NGLMTLPDVFEYWHLTTLVAKNNRFSNESLPKSFAESASMQELNLSGNVFEH-------- 116

Query: 149 PTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLE 208
                                    L +LS+GGN L ++P T G L QL+AL+L DN +E
Sbjct: 117 -------------------------LQILSMGGNQLVEVPSTLGQLKQLQALVLCDNLIE 151

Query: 209 SLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLK 268
           SLP++I+NL  LKSL LH NKLRTLP E                           II LK
Sbjct: 152 SLPSNIANLHNLKSLQLHKNKLRTLPPE---------------------------IIALK 184

Query: 269 CLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKV 305
            L+ELSLRDNPLV+RFVS++T+   SL EL++R +K+
Sbjct: 185 NLTELSLRDNPLVVRFVSNITHNTASLKELSARVIKL 221


>gi|410970565|ref|XP_003991749.1| PREDICTED: leucine-rich repeat-containing protein 58 [Felis catus]
          Length = 280

 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 92/197 (46%), Positives = 118/197 (59%), Gaps = 27/197 (13%)

Query: 167 EINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLH 226
           E+N    L  L LGGN + +IP    +L  L  L+L DN+++S+P  +S L         
Sbjct: 70  ELNSTTNLECLYLGGNFIKEIPPELANLPSLSYLVLCDNKIQSVPPQLSQL--------- 120

Query: 227 NNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVS 286
                               L+SL LHNN L  LP EI+ L  L ELSLR NPLV+RFV 
Sbjct: 121 ------------------HSLRSLSLHNNLLTYLPREILNLIHLEELSLRGNPLVVRFVR 162

Query: 287 DMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHI 346
           D+TY PP+LLELA+RT+K+  I Y+   LP NL++YL  A +C NPKC GV+FD  +  I
Sbjct: 163 DLTYDPPTLLELAARTIKIRNISYTPFDLPGNLLRYLSLASNCPNPKCGGVYFDCCVRQI 222

Query: 347 KFVDFCGKYRIPLLQYL 363
           KFVDFCGKYR+PL+ YL
Sbjct: 223 KFVDFCGKYRLPLMHYL 239



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 51/87 (58%)

Query: 121 DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
           ++++  NL+   L GN +++ P ++ ++P+L YL L +N +  VP ++++L  L  LSL 
Sbjct: 70  ELNSTTNLECLYLGGNFIKEIPPELANLPSLSYLVLCDNKIQSVPPQLSQLHSLRSLSLH 129

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQL 207
            N LT +P    +L  LE L L  N L
Sbjct: 130 NNLLTYLPREILNLIHLEELSLRGNPL 156



 Score = 44.3 bits (103), Expect = 0.093,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 41/70 (58%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           + +P +++NL +L    L  N+++  P Q+  + +L+ L L NN L ++PREI  L  L 
Sbjct: 88  KEIPPELANLPSLSYLVLCDNKIQSVPPQLSQLHSLRSLSLHNNLLTYLPREILNLIHLE 147

Query: 176 VLSLGGNSLT 185
            LSL GN L 
Sbjct: 148 ELSLRGNPLV 157


>gi|389609149|dbj|BAM18186.1| internalin A [Papilio xuthus]
          Length = 125

 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 81/121 (66%), Positives = 95/121 (78%), Gaps = 1/121 (0%)

Query: 273 LSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNP 332
           LSLRDNPLV+RFV DMT +PPSLLELA R +K++EI      +P  L++YL++A  CVNP
Sbjct: 5   LSLRDNPLVVRFVKDMTLQPPSLLELAGRNIKLYEIPIRVGEVPLTLIKYLKAAERCVNP 64

Query: 333 KCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCITNSPNVMYGDV-KNEDMMKKVLL 391
           KC+GVFFDNR+EHIKFVDFCGKYRIPLLQYLCSS+CIT S      D   N  MM+KVLL
Sbjct: 65  KCRGVFFDNRVEHIKFVDFCGKYRIPLLQYLCSSKCITGSWESREIDSNTNTHMMRKVLL 124

Query: 392 G 392
           G
Sbjct: 125 G 125


>gi|338728791|ref|XP_001500584.3| PREDICTED: leucine-rich repeat-containing protein 58-like, partial
           [Equus caballus]
          Length = 204

 Score =  171 bits (433), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 88/167 (52%), Positives = 117/167 (70%), Gaps = 4/167 (2%)

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
           LE L L  N ++ +P  ++NL  LK L+L +NK++++P ++  L      L+SL LHNN 
Sbjct: 1   LECLYLGGNFIKEIPPELANLPSLKYLVLCDNKIQSVPPQLSQL----HSLRSLSLHNNL 56

Query: 257 LRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLP 316
           L  LP EI+ L  L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+  I Y+   LP
Sbjct: 57  LTYLPREILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRNIPYTPYDLP 116

Query: 317 QNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
            NL++YL  A +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 117 GNLLRYLSLASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 163



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 30/80 (37%), Positives = 47/80 (58%)

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           L+   L GN +++ P ++ ++P+LKYL L +N +  VP ++++L  L  LSL  N LT +
Sbjct: 1   LECLYLGGNFIKEIPPELANLPSLKYLVLCDNKIQSVPPQLSQLHSLRSLSLHNNLLTYL 60

Query: 188 PDTFGDLYQLEALILSDNQL 207
           P    +L  LE L L  N L
Sbjct: 61  PREILNLIHLEELSLRGNPL 80



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 27/70 (38%), Positives = 42/70 (60%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           + +P +++NL +LK   L  N+++  P Q+  + +L+ L L NN L ++PREI  L  L 
Sbjct: 12  KEIPPELANLPSLKYLVLCDNKIQSVPPQLSQLHSLRSLSLHNNLLTYLPREILNLIHLE 71

Query: 176 VLSLGGNSLT 185
            LSL GN L 
Sbjct: 72  ELSLRGNPLV 81


>gi|350591934|ref|XP_003132699.2| PREDICTED: leucine-rich repeat-containing protein 58-like [Sus
           scrofa]
          Length = 224

 Score =  170 bits (430), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 89/174 (51%), Positives = 117/174 (67%), Gaps = 4/174 (2%)

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
           T G  + LE L L  N ++ +P  + NL  L  L+L +NK++++P  +  L      L+S
Sbjct: 14  TDGINFSLECLYLGGNFIKEIPPELGNLPSLNYLVLCDNKIQSVPPHLSQL----HSLRS 69

Query: 250 LLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEID 309
           L LHNN L  LP EI+ L  L ELSLR NPLV+RFV D+TY PP+LLELA+RT+K+  I 
Sbjct: 70  LSLHNNLLTYLPREILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLLELAARTIKIRNIS 129

Query: 310 YSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
           Y+   LP NL++YL  A +C NPKC GV+FD  +  IKFVDFCGKYR+PL+ YL
Sbjct: 130 YTPYDLPGNLLRYLSLASNCPNPKCGGVYFDCCVRQIKFVDFCGKYRLPLMHYL 183



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 1/95 (1%)

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
            +  SL  D  N  +L+   L GN +++ P ++ ++P+L YL L +N +  VP  +++L 
Sbjct: 7   FSGSSLRTDGINF-SLECLYLGGNFIKEIPPELGNLPSLNYLVLCDNKIQSVPPHLSQLH 65

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQL 207
            L  LSL  N LT +P    +L  LE L L  N L
Sbjct: 66  SLRSLSLHNNLLTYLPREILNLIHLEELSLRGNPL 100


>gi|148665549|gb|EDK97965.1| leucine rich repeat containing 58 [Mus musculus]
          Length = 202

 Score =  169 bits (428), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 90/187 (48%), Positives = 115/187 (61%), Gaps = 27/187 (14%)

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L LGGN + +IP    +L  L  L+L DN+++S+P  +S L                   
Sbjct: 2   LYLGGNFIKEIPPELANLPSLNYLVLCDNKIQSVPPQLSQL------------------- 42

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
                     L+SL LHNN L  LP EI+ L  L ELSLR NPLV+RFV D+TY PP+LL
Sbjct: 43  --------HSLRSLSLHNNLLTYLPREILNLIHLEELSLRGNPLVVRFVRDLTYDPPTLL 94

Query: 297 ELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYR 356
           ELA+RT+K+  I Y+   LP NL++YL SA +C NPKC GV+FD  +  IKFVDFCGKYR
Sbjct: 95  ELAARTIKIRSISYTPYDLPGNLLRYLGSASNCPNPKCGGVYFDCCVRQIKFVDFCGKYR 154

Query: 357 IPLLQYL 363
           +PL+ YL
Sbjct: 155 LPLMHYL 161



 Score = 46.6 bits (109), Expect = 0.020,   Method: Compositional matrix adjust.
 Identities = 28/75 (37%), Positives = 44/75 (58%)

Query: 133 LSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFG 192
           L GN +++ P ++ ++P+L YL L +N +  VP ++++L  L  LSL  N LT +P    
Sbjct: 4   LGGNFIKEIPPELANLPSLNYLVLCDNKIQSVPPQLSQLHSLRSLSLHNNLLTYLPREIL 63

Query: 193 DLYQLEALILSDNQL 207
           +L  LE L L  N L
Sbjct: 64  NLIHLEELSLRGNPL 78



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 41/70 (58%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           + +P +++NL +L    L  N+++  P Q+  + +L+ L L NN L ++PREI  L  L 
Sbjct: 10  KEIPPELANLPSLNYLVLCDNKIQSVPPQLSQLHSLRSLSLHNNLLTYLPREILNLIHLE 69

Query: 176 VLSLGGNSLT 185
            LSL GN L 
Sbjct: 70  ELSLRGNPLV 79


>gi|270005318|gb|EFA01766.1| hypothetical protein TcasGA2_TC007365 [Tribolium castaneum]
          Length = 246

 Score =  166 bits (420), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 96/217 (44%), Positives = 135/217 (62%), Gaps = 18/217 (8%)

Query: 29  FSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSN 88
           F+Y  LDS+ L   ++ L   D  K+ E+I++++L+HN L+  P N SK TN++ L +SN
Sbjct: 15  FAYLLLDSQQLEENLDEL-GKDCAKR-EDIESIILHHNQLTTLPKNLSKVTNVQVLHISN 72

Query: 89  NRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDI 148
           N +  LP     + L+TL+A+NN  + ESLPK  +                + P Q+ + 
Sbjct: 73  NGLMTLPDVFEYWHLTTLVAKNNRFSNESLPKSFA----------------EIPEQLFEF 116

Query: 149 PTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLE 208
             LKYLYL  N +  +P+ I KL  L +LS+GGN L ++P T G L QL+AL+L DN +E
Sbjct: 117 TNLKYLYLRGNKIKTIPKNIKKLNCLQILSMGGNQLVEVPSTLGQLKQLQALVLCDNLIE 176

Query: 209 SLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           SLP++I+NL  LKSL LH NKLRTLP EII LK L+E
Sbjct: 177 SLPSNIANLHNLKSLQLHKNKLRTLPPEIIALKNLTE 213



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/133 (28%), Positives = 63/133 (47%), Gaps = 23/133 (17%)

Query: 151 LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQL--E 208
           ++ + L +N L  +P+ ++K+  + VL +  N L  +PD F + + L  L+  +N+   E
Sbjct: 42  IESIILHHNQLTTLPKNLSKVTNVQVLHISNNGLMTLPDVF-EYWHLTTLVAKNNRFSNE 100

Query: 209 SLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLK 268
           SLP S + +                P ++         LK L L  NK++T+P  I  L 
Sbjct: 101 SLPKSFAEI----------------PEQLFEFT----NLKYLYLRGNKIKTIPKNIKKLN 140

Query: 269 CLSELSLRDNPLV 281
           CL  LS+  N LV
Sbjct: 141 CLQILSMGGNQLV 153


>gi|47198922|emb|CAF88588.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 212

 Score =  166 bits (419), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 94/216 (43%), Positives = 133/216 (61%), Gaps = 24/216 (11%)

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
           LE L L  N + ++P  ++NL  L  L+L +N+++++P ++  +      L+SL LHNN 
Sbjct: 1   LELLYLGGNLISAIPPELANLPNLSYLVLCDNRIQSIPPQLTRM----HSLRSLSLHNNL 56

Query: 257 LRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLP 316
           L  LP EI++L  L ELSLR NPLV+RFV +MTY PPSLLELA RT+K   I Y    LP
Sbjct: 57  LTYLPREILSLVHLHELSLRGNPLVVRFVKEMTYDPPSLLELAGRTIKSRNIPYYPCDLP 116

Query: 317 QNLVQYLESAHHCVNPK-CK------------GVFFDNRIEHIKFVDFCGKYRIPLLQYL 363
            NL++YL+ A     P+ C+            GV+FD+ + HIKFVDFCGKYR+PL+ YL
Sbjct: 117 ANLLRYLDLATQVPQPQVCRPLADPLSFVSPTGVYFDSCVRHIKFVDFCGKYRLPLMHYL 176

Query: 364 CSSRCITNSPNVMYGDVKNED-------MMKKVLLG 392
           CS +C +   +    D ++ED        +++VLLG
Sbjct: 177 CSPQCTSPCSSNPQSDAESEDESSVPAYRLQRVLLG 212



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/83 (39%), Positives = 48/83 (57%), Gaps = 2/83 (2%)

Query: 103 LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLN 162
           L  L    NL++A  +P +++NL NL    L  N+++  P Q+  + +L+ L L NN L 
Sbjct: 1   LELLYLGGNLISA--IPPELANLPNLSYLVLCDNRIQSIPPQLTRMHSLRSLSLHNNLLT 58

Query: 163 HVPREINKLCKLHVLSLGGNSLT 185
           ++PREI  L  LH LSL GN L 
Sbjct: 59  YLPREILSLVHLHELSLRGNPLV 81



 Score = 43.5 bits (101), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 26/80 (32%), Positives = 41/80 (51%)

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           L++  L GN +   P ++ ++P L YL L +N +  +P ++ ++  L  LSL  N LT +
Sbjct: 1   LELLYLGGNLISAIPPELANLPNLSYLVLCDNRIQSIPPQLTRMHSLRSLSLHNNLLTYL 60

Query: 188 PDTFGDLYQLEALILSDNQL 207
           P     L  L  L L  N L
Sbjct: 61  PREILSLVHLHELSLRGNPL 80


>gi|71993783|ref|NP_001022865.1| Protein Y42G9A.3, isoform b [Caenorhabditis elegans]
 gi|351063110|emb|CCD71153.1| Protein Y42G9A.3, isoform b [Caenorhabditis elegans]
          Length = 295

 Score =  159 bits (403), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/273 (41%), Positives = 156/273 (57%), Gaps = 35/273 (12%)

Query: 47  PNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LST 105
           P  DY+  P+N+  L L HN+        + F N+  LD+S N ++ LP+ I     L+T
Sbjct: 54  PEEDYD--PQNVKKLDLTHNSFVIL-RGLTTFNNVSVLDVSFNSLSALPEDIGTLSSLTT 110

Query: 106 LIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
           LIARNNLL  E LPK +  L+NL+   LSGN+LE  P  IL +  LK L+LG N ++  P
Sbjct: 111 LIARNNLL--EHLPKGLQLLENLEHLYLSGNRLEYVPPVILTMRKLKTLHLGGNYIDSCP 168

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             I+ L  L VL LGGN L +IP + G L +LE L L DN LE++P+++ +L  L++L L
Sbjct: 169 SNISVLTLLRVLYLGGNRLREIPASIGCLDELENLGLCDNILETIPSTLGDLHYLETLSL 228

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFV 285
           HNN+LRTLP                           T+I+ L+ L +LSLR+NPLV  FV
Sbjct: 229 HNNRLRTLP---------------------------TDILNLRRLQQLSLRNNPLVHSFV 261

Query: 286 SDMTYKPPSLLELASRTLK--VHEIDYSQEHLP 316
            +M   PPSL EL+ RT++   H++    E LP
Sbjct: 262 HNMDLAPPSLKELSGRTVRQNYHKVPNLDEILP 294


>gi|410451706|ref|ZP_11305708.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014472|gb|EKO76602.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 515

 Score =  145 bits (367), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/227 (43%), Positives = 132/227 (58%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L +N L+  P    K  NL+ +  S N++T LP+ I N   L  L   +N LT
Sbjct: 250 QNLKILSLGNNQLTTLPKEVGKLQNLQEMKSSKNQLTTLPKEIGNLQNLQELYLAHNQLT 309

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  LPK++ NL+NL+   L GNQL   PI+I ++  L+ L+LGNN L   P+EI  L KL
Sbjct: 310 A--LPKEIGNLQNLQQLYLYGNQLTTLPIEIGNLQNLQGLHLGNNKLTAFPKEIGNLQKL 367

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT IP   G+L  L+ L LS NQL ++P  I NL+ L+ L L+NN+L  LP
Sbjct: 368 KWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIENLQNLQVLDLNNNQLTALP 427

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L    + LK L L +N+L TLP EI  L+ L  L L +NPL 
Sbjct: 428 KEIGNL----QNLKELDLTSNRLTTLPKEIGNLQSLESLDLSNNPLT 470



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 92/229 (40%), Positives = 125/229 (54%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L  N L   P    K   L+ L+L+ NR+ +LP+ I     L  L    N 
Sbjct: 133 KLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQELDLEGNQ 192

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L   +LP+++ NL+NL+  +L GNQL   P +I  +  LK LYL NN L   P+EI  L 
Sbjct: 193 LA--TLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTFPKEIEDLQ 250

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L +LSLG N LT +P   G L  L+ +  S NQL +LP  I NL+ L+ L L +N+L  
Sbjct: 251 NLKILSLGNNQLTTLPKEVGKLQNLQEMKSSKNQLTTLPKEIGNLQNLQELYLAHNQLTA 310

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP EI  L    + L+ L L+ N+L TLP EI  L+ L  L L +N L 
Sbjct: 311 LPKEIGNL----QNLQQLYLYGNQLTTLPIEIGNLQNLQGLHLGNNKLT 355



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/229 (39%), Positives = 125/229 (54%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L  N L+  P+      NL++LDL  N++T LP+ I     L  L   NN 
Sbjct: 179 KLQNLQELDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNR 238

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  + PK++ +L+NLK+ +L  NQL   P ++  +  L+ +    N L  +P+EI  L 
Sbjct: 239 LT--TFPKEIEDLQNLKILSLGNNQLTTLPKEVGKLQNLQEMKSSKNQLTTLPKEIGNLQ 296

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N LT +P   G+L  L+ L L  NQL +LP  I NL+ L+ L L NNKL  
Sbjct: 297 NLQELYLAHNQLTALPKEIGNLQNLQQLYLYGNQLTTLPIEIGNLQNLQGLHLGNNKLTA 356

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            P EI  L    +KLK L L+ N+L T+P EI  L+ L EL+L  N L 
Sbjct: 357 FPKEIGNL----QKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLT 401



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/210 (40%), Positives = 113/210 (53%), Gaps = 7/210 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L HN L+  P       NL+ L L  N++T LP  I N   L  L   NN LT
Sbjct: 296 QNLQELYLAHNQLTALPKEIGNLQNLQQLYLYGNQLTTLPIEIGNLQNLQGLHLGNNKLT 355

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A   PK++ NL+ LK   L+ NQL   P +I ++  LK L L +N L  +P+EI  L  L
Sbjct: 356 A--FPKEIGNLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIENLQNL 413

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N LT +P   G+L  L+ L L+ N+L +LP  I NL+ L+SL L NN L + P
Sbjct: 414 QVLDLNNNQLTALPKEIGNLQNLKELDLTSNRLTTLPKEIGNLQSLESLDLSNNPLTSFP 473

Query: 235 TEIITLKCLS----EKLKSLLLHNNKLRTL 260
            EI  L+ L     E + +LL    K+R L
Sbjct: 474 EEIGKLQHLKRLRLENIPTLLPQKEKIRKL 503



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 94/165 (56%), Gaps = 4/165 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++  L+NL+  +LS NQL   P +I  +  L+ L L  N L ++P EI KL  L  
Sbjct: 126 TLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQE 185

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L GN L  +P+  G+L  L+ L L  NQL +LP  I  L+ LK L L+NN+L T P E
Sbjct: 186 LDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTFPKE 245

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I  L    + LK L L NN+L TLP E+  L+ L E+    N L 
Sbjct: 246 IEDL----QNLKILSLGNNQLTTLPKEVGKLQNLQEMKSSKNQLT 286



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/148 (42%), Positives = 85/148 (57%), Gaps = 4/148 (2%)

Query: 134 SGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGD 193
           S + L   P +I  +  L+ L L +N L  +P+EI KL KL  L+L  N L ++P+  G 
Sbjct: 120 SNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGK 179

Query: 194 LYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLH 253
           L  L+ L L  NQL +LP  I NL+ L++L L  N+L TLP EI  L    + LK L L+
Sbjct: 180 LQNLQELDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKL----QNLKKLYLY 235

Query: 254 NNKLRTLPTEIITLKCLSELSLRDNPLV 281
           NN+L T P EI  L+ L  LSL +N L 
Sbjct: 236 NNRLTTFPKEIEDLQNLKILSLGNNQLT 263


>gi|379731535|ref|YP_005323731.1| putative lipoprotein [Saprospira grandis str. Lewin]
 gi|378577146|gb|AFC26147.1| putative lipoprotein [Saprospira grandis str. Lewin]
          Length = 526

 Score =  143 bits (360), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/223 (40%), Positives = 128/223 (57%), Gaps = 13/223 (5%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L  N+L+  P     + NLR L LS N +  LP+AI     L  LI ++N L   +LP+ 
Sbjct: 235 LERNSLNSLPPTIGTWKNLRELRLSENNLETLPKAIGQCQALEQLIIQDNALA--TLPES 292

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG- 180
           M  LK LK   L GNQLE+ P  ++    L+ L LG+N L  +P EI  L +L VL+LG 
Sbjct: 293 MGQLKQLKTLALQGNQLERLPAGLMQAEALRILRLGDNQLRQLPEEIGNLKQLKVLNLGE 352

Query: 181 -----GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
                GN L  +P++ G L QLE LI+++N+L SLP S+ N + ++ + L NN+LRTLP+
Sbjct: 353 DPLSEGNQLVSLPNSLGQLQQLEELIVNNNRLSSLPKSLGNCQSIRKIELINNQLRTLPS 412

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
               L    EKL+ LLL  N+L+ LP  +  L+ L  L L +N
Sbjct: 413 SFGQL----EKLEVLLLRGNRLQALPDSLSGLRSLEWLDLSNN 451



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/167 (36%), Positives = 88/167 (52%), Gaps = 4/167 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +L + ++ L  L+  + + + LE+    +     LK L L  NSLN +P  I     
Sbjct: 193 TEITLSRSINQLSQLEELSWTYSSLERLDGNMAIFKRLKRLNLERNSLNSLPPTIGTWKN 252

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N+L  +P   G    LE LI+ DN L +LP S+  LK LK+L L  N+L  L
Sbjct: 253 LRELRLSENNLETLPKAIGQCQALEQLIIQDNALATLPESMGQLKQLKTLALQGNQLERL 312

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P  ++     +E L+ L L +N+LR LP EI  LK L  L+L ++PL
Sbjct: 313 PAGLMQ----AEALRILRLGDNQLRQLPEEIGNLKQLKVLNLGEDPL 355



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/171 (36%), Positives = 88/171 (51%), Gaps = 10/171 (5%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           E L  +M+  K LK  NL  N L   P  I     L+ L L  N+L  +P+ I +   L 
Sbjct: 218 ERLDGNMAIFKRLKRLNLERNSLNSLPPTIGTWKNLRELRLSENNLETLPKAIGQCQALE 277

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L +  N+L  +P++ G L QL+ L L  NQLE LPA +   + L+ L L +N+LR LP 
Sbjct: 278 QLIIQDNALATLPESMGQLKQLKTLALQGNQLERLPAGLMQAEALRILRLGDNQLRQLPE 337

Query: 236 EIITLKCLSEKLKSL------LLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI  LK    +LK L      L   N+L +LP  +  L+ L EL + +N L
Sbjct: 338 EIGNLK----QLKVLNLGEDPLSEGNQLVSLPNSLGQLQQLEELIVNNNRL 384



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 93/199 (46%), Gaps = 12/199 (6%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLS------NNRITH 93
             Q+E LP      + E +  L L  N L   P+       L+ L+L        N++  
Sbjct: 306 GNQLERLPAGLM--QAEALRILRLGDNQLRQLPEEIGNLKQLKVLNLGEDPLSEGNQLVS 363

Query: 94  LPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
           LP ++     L  LI  NN L+  SLPK + N ++++   L  NQL   P     +  L+
Sbjct: 364 LPNSLGQLQQLEELIVNNNRLS--SLPKSLGNCQSIRKIELINNQLRTLPSSFGQLEKLE 421

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNS-LTDIPDTFGDLYQLEALILSDNQLESLP 211
            L L  N L  +P  ++ L  L  L L  N+ L  +P+  G L QL+ L +S   ++ LP
Sbjct: 422 VLLLRGNRLQALPDSLSGLRSLEWLDLSNNNRLRALPEDIGRLDQLKNLDISGTGIKHLP 481

Query: 212 ASISNLKMLKSLLLHNNKL 230
            SI NL  L+ L++H  ++
Sbjct: 482 KSIENLYSLEFLVIHKGQI 500


>gi|417782200|ref|ZP_12429933.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410777793|gb|EKR62438.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 381

 Score =  140 bits (353), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 94/231 (40%), Positives = 138/231 (59%), Gaps = 9/231 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARN 110
           K P ++  L L    L+  P    KF NL+ LDLS+N++  LP+ I     L  L ++ N
Sbjct: 44  KNPMDVRVLNLNERQLTVLPKEIEKFQNLKQLDLSDNQLKVLPKEIGQLQNLQVLNLSAN 103

Query: 111 NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
           NL+   +LPK++  L+NLK  NLSGN+L   P +I  +  L++L++ +N L  +P+EI +
Sbjct: 104 NLI---NLPKEIDQLQNLKRLNLSGNRLTTLPQEIGQLKKLEWLHVSHNRLTVLPKEIGQ 160

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L  L L GNSLT +P+  G L + E L L DNQL +LP  +  L+ L+ + LH N+L
Sbjct: 161 LQNLKELLLYGNSLTTLPEEIGQLQKFERLYLHDNQLTTLPQGLCKLQNLEQIYLHQNRL 220

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            +LP EI  L     KL +L L++N+L TLP EI  L+ L +L+L+ N L 
Sbjct: 221 TSLPQEIGQLG----KLWTLYLYSNELTTLPEEIGQLQNLRQLNLKLNNLT 267



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/187 (37%), Positives = 99/187 (52%), Gaps = 3/187 (1%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAE 116
           ++ L + HN L+  P    +  NL+ L L  N +T LP+ I        L   +N LT  
Sbjct: 141 LEWLHVSHNRLTVLPKEIGQLQNLKELLLYGNSLTTLPEEIGQLQKFERLYLHDNQLT-- 198

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LP+ +  L+NL+   L  N+L   P +I  +  L  LYL +N L  +P EI +L  L  
Sbjct: 199 TLPQGLCKLQNLEQIYLHQNRLTSLPQEIGQLGKLWTLYLYSNELTTLPEEIGQLQNLRQ 258

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+L  N+LT +P   G L +L+ L LSDNQL S+P  I  L+ L+ L L  N L  LP E
Sbjct: 259 LNLKLNNLTTLPKEIGQLQKLDNLDLSDNQLTSIPKEIGQLQNLRWLDLSGNPLVILPKE 318

Query: 237 IITLKCL 243
           I  LK L
Sbjct: 319 IGQLKNL 325



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 91/168 (54%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +L +   N  +++V NL+  QL   P +I     LK L L +N L  +P+EI +L  
Sbjct: 35  TYRTLTEAFKNPMDVRVLNLNERQLTVLPKEIEKFQNLKQLDLSDNQLKVLPKEIGQLQN 94

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L VL+L  N+L ++P     L  L+ L LS N+L +LP  I  LK L+ L + +N+L  L
Sbjct: 95  LQVLNLSANNLINLPKEIDQLQNLKRLNLSGNRLTTLPQEIGQLKKLEWLHVSHNRLTVL 154

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L    + LK LLL+ N L TLP EI  L+    L L DN L 
Sbjct: 155 PKEIGQL----QNLKELLLYGNSLTTLPEEIGQLQKFERLYLHDNQLT 198



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/138 (31%), Positives = 61/138 (44%), Gaps = 19/138 (13%)

Query: 164 VPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL 223
           +P  I   CKL   S  G +   + + F +   +  L L++ QL  LP  I   + LK L
Sbjct: 16  IPLLICLFCKLQAQSNEGQTYRTLTEAFKNPMDVRVLNLNERQLTVLPKEIEKFQNLKQL 75

Query: 224 LLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEI 264
            L +N+L+ LP EI  L+ L                    + LK L L  N+L TLP EI
Sbjct: 76  DLSDNQLKVLPKEIGQLQNLQVLNLSANNLINLPKEIDQLQNLKRLNLSGNRLTTLPQEI 135

Query: 265 ITLKCLSELSLRDNPLVI 282
             LK L  L +  N L +
Sbjct: 136 GQLKKLEWLHVSHNRLTV 153


>gi|255082906|ref|XP_002504439.1| predicted protein [Micromonas sp. RCC299]
 gi|226519707|gb|ACO65697.1| predicted protein [Micromonas sp. RCC299]
          Length = 522

 Score =  140 bits (352), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 91/219 (41%), Positives = 120/219 (54%), Gaps = 7/219 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L  N L+  P    + T+L+ LDLS+NR+  +P  I     L  L    N LT  S+P +
Sbjct: 237 LGGNELTSVPAEIGQLTSLQWLDLSDNRLASVPADIGQLTSLEGLGLNGNQLT--SVPAE 294

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L +LKV  L GNQL   P +I  + +L  L L NN L  VP EI +L  L  L LGG
Sbjct: 295 IWQLTSLKVLGLRGNQLTSVPAEIGQLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGG 354

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N LT +P   G L  L  L L++NQL S+PA I  L  L+ L L  N+L ++P EI  L 
Sbjct: 355 NRLTSVPAEIGRLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLT 414

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
                LK L L+ N+L ++P EI  L  L+ELSL+ N L
Sbjct: 415 S----LKGLALYGNQLTSVPAEIGQLTALTELSLQRNKL 449



 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/240 (37%), Positives = 122/240 (50%), Gaps = 13/240 (5%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L  N+    P  I  L       L  N L+  P +  + T+L  L L+ N++T +P  I 
Sbjct: 237 LGGNELTSVPAEIGQLTSLQWLDLSDNRLASVPADIGQLTSLEGLGLNGNQLTSVPAEIW 296

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L  L  R N LT  S+P ++  L +L   NL+ NQL   P +I  + +L+ L+LG 
Sbjct: 297 QLTSLKVLGLRGNQLT--SVPAEIGQLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGG 354

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  VP EI +L  L  L+L  N LT +P     L  L  L L  N+L S+PA I  L 
Sbjct: 355 NRLTSVPAEIGRLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLT 414

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            LK L L+ N+L ++P EI  L  L+E    L L  NKL+++P EI  L  L EL L DN
Sbjct: 415 SLKGLALYGNQLTSVPAEIGQLTALTE----LSLQRNKLKSVPAEIGQLATLKELWLNDN 470



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/214 (37%), Positives = 116/214 (54%), Gaps = 7/214 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           ++  L L  N L+  P    + T+L  L+L+NN++T +P  I     L  L    N LT 
Sbjct: 300 SLKVLGLRGNQLTSVPAEIGQLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLT- 358

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            S+P ++  L +L   NL+ NQL   P +I  + +L+ L+LG N L  VP EI +L  L 
Sbjct: 359 -SVPAEIGRLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLTSLK 417

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L+L GN LT +P   G L  L  L L  N+L+S+PA I  L  LK L L++N L ++P 
Sbjct: 418 GLALYGNQLTSVPAEIGQLTALTELSLQRNKLKSVPAEIGQLATLKELWLNDNLLTSVPA 477

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           EI  L+ L+    SL L  N+L ++P  I  L+ 
Sbjct: 478 EIGQLRALT----SLNLDRNRLTSVPAAIRELRA 507



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/213 (39%), Positives = 115/213 (53%), Gaps = 11/213 (5%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIA---RNNLLTAESLPKDMSNLKN 127
            P    + T LR LDL+ N++T +P  I    L++L+      N LT  S+P ++  L +
Sbjct: 199 VPAEVGRLTALRELDLNGNQLTSVPVEIGQ--LTSLVKFGLGGNELT--SVPAEIGQLTS 254

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           L+  +LS N+L   P  I  + +L+ L L  N L  VP EI +L  L VL L GN LT +
Sbjct: 255 LQWLDLSDNRLASVPADIGQLTSLEGLGLNGNQLTSVPAEIWQLTSLKVLGLRGNQLTSV 314

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
           P   G L  L  L L++NQL S+PA I  L  L+ L L  N+L ++P EI  L  LSE  
Sbjct: 315 PAEIGQLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLTSLSE-- 372

Query: 248 KSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             L L+NN+L ++P EI  L  L  L L  N L
Sbjct: 373 --LNLNNNQLTSVPAEIWQLTSLRGLFLGGNRL 403



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 93/183 (50%), Gaps = 19/183 (10%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++P ++  L  L+  +L+GNQL   P++I  + +L    LG N L  VP EI +L  L  
Sbjct: 198 AVPAEVGRLTALRELDLNGNQLTSVPVEIGQLTSLVKFGLGGNELTSVPAEIGQLTSLQW 257

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L  +P   G L  LE L L+ NQL S+PA I  L  LK L L  N+L ++P E
Sbjct: 258 LDLSDNRLASVPADIGQLTSLEGLGLNGNQLTSVPAEIWQLTSLKVLGLRGNQLTSVPAE 317

Query: 237 IITLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRD 277
           I  L  LSE                    L+ L L  N+L ++P EI  L  LSEL+L +
Sbjct: 318 IGQLTSLSELNLNNNQLTSVPAEIWQLTSLRGLFLGGNRLTSVPAEIGRLTSLSELNLNN 377

Query: 278 NPL 280
           N L
Sbjct: 378 NQL 380


>gi|421100175|ref|ZP_15560811.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796765|gb|EKR98888.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 406

 Score =  139 bits (351), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 95/231 (41%), Positives = 137/231 (59%), Gaps = 9/231 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARN 110
           K P ++  L L    L+ FP    KF NL+ LDLSNN++  LP+ I     L  L ++ N
Sbjct: 45  KNPMDVGVLDLSSKLLTTFPKGIEKFQNLKHLDLSNNQLKALPKEIGQLQNLQKLNVSVN 104

Query: 111 NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
           NL+    LP+++  L+NL+  NLSGN+L   P +I  +  L+ L++  N L  +P+EI +
Sbjct: 105 NLI---ELPQEIGQLQNLEQLNLSGNRLTTLPQEIGQLKKLETLHVYYNRLTILPKEIGQ 161

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L  L L GNSLT +P+  G L + E L L DNQL +LP  +  L+ L+ + LH N+L
Sbjct: 162 LQNLEELILYGNSLTSLPEEIGQLQKFEKLYLHDNQLTTLPQGLCKLQNLEQIYLHQNRL 221

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            +LP EI  L+    KL +L L++N+L TLP EI  L+ L +LSL+ N L 
Sbjct: 222 TSLPKEIGQLR----KLWTLYLYSNELTTLPEEIGQLQNLRQLSLKLNNLT 268



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/226 (39%), Positives = 119/226 (52%), Gaps = 7/226 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAE 116
           ++TL +Y+N L+  P    +  NL  L L  N +T LP+ I        L   +N LT  
Sbjct: 142 LETLHVYYNRLTILPKEIGQLQNLEELILYGNSLTSLPEEIGQLQKFEKLYLHDNQLT-- 199

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LP+ +  L+NL+   L  N+L   P +I  +  L  LYL +N L  +P EI +L  L  
Sbjct: 200 TLPQGLCKLQNLEQIYLHQNRLTSLPKEIGQLRKLWTLYLYSNELTTLPEEIGQLQNLRQ 259

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           LSL  N+LT +P   G L  L+ L LSDNQL  +P  I  L+ LK L L  N L TLP E
Sbjct: 260 LSLKLNNLTTLPKEIGQLQNLDNLDLSDNQLTLIPKEIGQLQNLKLLDLSGNSLTTLPKE 319

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           I  L    + LK L L  N L TLP EI  LK L  L+++  P +I
Sbjct: 320 IGQL----QNLKLLDLSGNSLTTLPKEIGQLKNLYFLAMKGIPDLI 361



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/165 (38%), Positives = 92/165 (55%), Gaps = 4/165 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +L + + N  ++ V +LS   L  FP  I     LK+L L NN L  +P+EI +L  L  
Sbjct: 39  NLTEALKNPMDVGVLDLSSKLLTTFPKGIEKFQNLKHLDLSNNQLKALPKEIGQLQNLQK 98

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L++  N+L ++P   G L  LE L LS N+L +LP  I  LK L++L ++ N+L  LP E
Sbjct: 99  LNVSVNNLIELPQEIGQLQNLEQLNLSGNRLTTLPQEIGQLKKLETLHVYYNRLTILPKE 158

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I  L+ L E    L+L+ N L +LP EI  L+   +L L DN L 
Sbjct: 159 IGQLQNLEE----LILYGNSLTSLPEEIGQLQKFEKLYLHDNQLT 199



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/107 (40%), Positives = 54/107 (50%), Gaps = 4/107 (3%)

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           VL L    LT  P        L+ L LS+NQL++LP  I  L+ L+ L +  N L  LP 
Sbjct: 52  VLDLSSKLLTTFPKGIEKFQNLKHLDLSNNQLKALPKEIGQLQNLQKLNVSVNNLIELPQ 111

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           EI  L    + L+ L L  N+L TLP EI  LK L  L +  N L I
Sbjct: 112 EIGQL----QNLEQLNLSGNRLTTLPQEIGQLKKLETLHVYYNRLTI 154


>gi|418744888|ref|ZP_13301233.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794219|gb|EKR92129.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 481

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 101/260 (38%), Positives = 143/260 (55%), Gaps = 18/260 (6%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           +++TLD   + L +         LP   +N   +N+ TL L  N L+  P+      NL+
Sbjct: 105 NLQTLDLGRNQLTT---------LPEEIWNL--QNLQTLDLGRNQLTTLPEEIWNLQNLQ 153

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           +LDL  N++T LP+ I N   L TL    N L   +LP+++ NL+NL+  +L GNQL   
Sbjct: 154 TLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLA--TLPEEIGNLQNLQTLDLEGNQLTTL 211

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P +I  +  LK LYL NN L  +P+E+ KL  L  L L  N LT +P    DL  L+ L 
Sbjct: 212 PKEIGKLQNLKKLYLYNNRLTTLPKEVGKLQNLQELYLYNNRLTTLPKEIEDLQNLKILS 271

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           L  NQL +LP  +  L+ L+ L L+NN+L TLP EI  L    + L+ L L++N+  TLP
Sbjct: 272 LGSNQLTTLPKEVGKLQNLQELYLYNNRLTTLPKEIGNL----QNLQDLNLNSNQFTTLP 327

Query: 262 TEIITLKCLSELSLRDNPLV 281
            EI  L+ L +LSL  N L 
Sbjct: 328 KEIWNLQKLQKLSLGRNQLT 347



 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/229 (41%), Positives = 130/229 (56%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L  N L   P    K  NL+ LDLS+N++T LP+ I     L  L   +N 
Sbjct: 33  KLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQ 92

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +L K++ NL+NL+  +L  NQL   P +I ++  L+ L LG N L  +P EI  L 
Sbjct: 93  LT--TLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQ 150

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L LG N LT +P+  G+L  L+ L L  NQL +LP  I NL+ L++L L  N+L T
Sbjct: 151 NLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTT 210

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP EI  L    + LK L L+NN+L TLP E+  L+ L EL L +N L 
Sbjct: 211 LPKEIGKL----QNLKKLYLYNNRLTTLPKEVGKLQNLQELYLYNNRLT 255



 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/227 (40%), Positives = 127/227 (55%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  P+      NL++LDL  N++T LP+ I     L  L   NN LT
Sbjct: 173 QNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLT 232

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+   L  N+L   P +I D+  LK L LG+N L  +P+E+ KL  L
Sbjct: 233 --TLPKEVGKLQNLQELYLYNNRLTTLPKEIEDLQNLKILSLGSNQLTTLPKEVGKLQNL 290

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G+L  L+ L L+ NQ  +LP  I NL+ L+ L L  N+L TLP
Sbjct: 291 QELYLYNNRLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLP 350

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L    + LK+L L  N+L TLP EI  L+ L +L L  N L 
Sbjct: 351 EEIWNL----QNLKTLDLEGNQLATLPEEIGNLQNLQKLDLEGNQLT 393



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 95/230 (41%), Positives = 131/230 (56%), Gaps = 7/230 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L LY+N L+  P       NL+ L L +N++T LP+ +     L  L   NN 
Sbjct: 240 KLQNLQELYLYNNRLTTLPKEIEDLQNLKILSLGSNQLTTLPKEVGKLQNLQELYLYNNR 299

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LPK++ NL+NL+  NL+ NQ    P +I ++  L+ L LG N L  +P EI  L 
Sbjct: 300 LT--TLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIWNLQ 357

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L GN L  +P+  G+L  L+ L L  NQL +LP  I  L+ LK L L+NN+L T
Sbjct: 358 NLKTLDLEGNQLATLPEEIGNLQNLQKLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTT 417

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           LP EI  L    +KL++L L +N+L TLP EI  L+ L  L L  NP +I
Sbjct: 418 LPIEIGNL----QKLQTLSLGHNQLTTLPKEIGNLQKLKMLDLGGNPSLI 463



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 95/165 (57%), Gaps = 4/165 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++  L+NL+  +LS NQL   P +I  +  L+ L L +N L  +P+EI +L  L  
Sbjct: 26  TLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQK 85

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+L  N LT +    G+L  L+ L L  NQL +LP  I NL+ L++L L  N+L TLP E
Sbjct: 86  LNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEE 145

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I  L    + L++L L  N+L TLP EI  L+ L  L L  N L 
Sbjct: 146 IWNL----QNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLA 186


>gi|255084109|ref|XP_002508629.1| hypothetical protein MICPUN_62214 [Micromonas sp. RCC299]
 gi|226523906|gb|ACO69887.1| hypothetical protein MICPUN_62214 [Micromonas sp. RCC299]
          Length = 1098

 Score =  139 bits (349), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 104/279 (37%), Positives = 144/279 (51%), Gaps = 29/279 (10%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A Q+  LP   +   P  +  L LY N L+  P    +  +L  L+LS+N++T++P  I 
Sbjct: 412 ANQLTSLPAEIWQLTP--LTELYLYGNQLTSVPAEIGQLRSLTELNLSSNQLTNVPAEIG 469

Query: 100 N------FPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKY 153
                  F LS      N LT  S+P ++  L +L+ F LSGNQL   P +I  + +L+ 
Sbjct: 470 QLRSRREFGLS-----GNQLT--SVPAEIGQLTSLEEFGLSGNQLTSVPAEIGRLTSLER 522

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           L+L +N L  VP EI +L  L  L L GN LT +P   G L  LE L L  NQL S+P  
Sbjct: 523 LWLEDNKLTSVPAEIGRLRALEWLYLHGNQLTSVPAEVGQLTSLEKLDLQHNQLTSVPVE 582

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           +  L  L SL L NN+L ++P EI  L  L E    L LH+N+L ++P EI  L  L EL
Sbjct: 583 VGQLTSLMSLNLGNNRLTSVPAEIGQLTSLWE----LWLHDNELTSVPAEIWQLTSLREL 638

Query: 274 SLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQ 312
           SL         V+ +T  P  + +L S  LK  E+  +Q
Sbjct: 639 SL--------AVNQLTSVPAEIGQLTS--LKTLELGGNQ 667



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 87/222 (39%), Positives = 119/222 (53%), Gaps = 7/222 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L++  N L+  P      T+LR L LS NR+T +P+ I     ++ L    N LT  SLP
Sbjct: 270 LVVGGNALTSVPAEIGLLTSLRELWLSGNRLTSVPEEIGQLTAMTELYLNANQLT--SLP 327

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            ++  L++L++  L GNQL   P +I  + +LK L L NN L  VP EI +L  L  L L
Sbjct: 328 VEIGQLRSLEMLQLGGNQLTSVPAEIRQLTSLKCLDLNNNQLTSVPAEIGQLTSLISLHL 387

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
           G N LT +P   G L  +  L L+ NQL SLPA I  L  L  L L+ N+L ++P EI  
Sbjct: 388 GKNQLTSVPAEIGQLTAMTELYLNANQLTSLPAEIWQLTPLTELYLYGNQLTSVPAEIGQ 447

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L+ L+E    L L +N+L  +P EI  L+   E  L  N L 
Sbjct: 448 LRSLTE----LNLSSNQLTNVPAEIGQLRSRREFGLSGNQLT 485



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/248 (36%), Positives = 123/248 (49%), Gaps = 24/248 (9%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           +++ L L HN L+  P    + T+L SL+L NNR+T +P  I     L  L   +N LT 
Sbjct: 565 SLEKLDLQHNQLTSVPVEVGQLTSLMSLNLGNNRLTSVPAEIGQLTSLWELWLHDNELT- 623

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            S+P ++  L +L+  +L+ NQL   P +I  + +LK L LG N L  VP EI +L  L 
Sbjct: 624 -SVPAEIWQLTSLRELSLAVNQLTSVPAEIGQLTSLKTLELGGNQLTSVPAEIGQLTSLE 682

Query: 176 VLSLGGNSLTDIP-DTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT-L 233
            L L  N LT +P D    L  LE+L L DN L S P  I  L  LK L L  NKL T +
Sbjct: 683 TLDLDDNKLTSVPADILQQLTSLESLELGDNHLTSWPEEIGQLTSLKELTLRGNKLTTSV 742

Query: 234 PTEIITLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           P EI  L  L                      L+ L L++N+L ++P E+  L  L  L 
Sbjct: 743 PAEIGQLTSLKTLDLRCNQLTSVPAEIGQLTSLRWLWLNDNRLTSVPAELGQLTSLEGLW 802

Query: 275 LRDNPLVI 282
           L+ N L I
Sbjct: 803 LKGNQLTI 810



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/233 (36%), Positives = 124/233 (53%), Gaps = 6/233 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           +++ L L  N L+  P    +   L  L L  N++T +P  +     L  L  ++N LT 
Sbjct: 519 SLERLWLEDNKLTSVPAEIGRLRALEWLYLHGNQLTSVPAEVGQLTSLEKLDLQHNQLT- 577

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            S+P ++  L +L   NL  N+L   P +I  + +L  L+L +N L  VP EI +L  L 
Sbjct: 578 -SVPVEVGQLTSLMSLNLGNNRLTSVPAEIGQLTSLWELWLHDNELTSVPAEIWQLTSLR 636

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            LSL  N LT +P   G L  L+ L L  NQL S+PA I  L  L++L L +NKL ++P 
Sbjct: 637 ELSLAVNQLTSVPAEIGQLTSLKTLELGGNQLTSVPAEIGQLTSLETLDLDDNKLTSVPA 696

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDM 288
           +I  L+ L+  L+SL L +N L + P EI  L  L EL+LR N L     +++
Sbjct: 697 DI--LQQLT-SLESLELGDNHLTSWPEEIGQLTSLKELTLRGNKLTTSVPAEI 746



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 84/233 (36%), Positives = 118/233 (50%), Gaps = 15/233 (6%)

Query: 46  LPNNDYNKKPENIDTL------LLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN     P  I  L       L+ N L+  P    + T+LR L L+ N++T +P  I 
Sbjct: 594 LGNNRLTSVPAEIGQLTSLWELWLHDNELTSVPAEIWQLTSLRELSLAVNQLTSVPAEIG 653

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILD-IPTLKYLYLG 157
               L TL    N LT  S+P ++  L +L+  +L  N+L   P  IL  + +L+ L LG
Sbjct: 654 QLTSLKTLELGGNQLT--SVPAEIGQLTSLETLDLDDNKLTSVPADILQQLTSLESLELG 711

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLT-DIPDTFGDLYQLEALILSDNQLESLPASISN 216
           +N L   P EI +L  L  L+L GN LT  +P   G L  L+ L L  NQL S+PA I  
Sbjct: 712 DNHLTSWPEEIGQLTSLKELTLRGNKLTTSVPAEIGQLTSLKTLDLRCNQLTSVPAEIGQ 771

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           L  L+ L L++N+L ++P E+  L      L+ L L  N+L  +P EI  LK 
Sbjct: 772 LTSLRWLWLNDNRLTSVPAELGQLTS----LEGLWLKGNQLTIVPAEIRELKA 820



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 89/165 (53%), Gaps = 4/165 (2%)

Query: 117  SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            ++P ++  L  L+  +L GNQ+   P +I  + +L+ LYL  N L  VP EI +L  L  
Sbjct: 889  AVPAELGRLSALRWLSLHGNQVTSLPAEIGQLTSLEVLYLTENQLTSVPAEIGQLTSLRE 948

Query: 177  LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
            L L  N LT +P   G L  L  L L DNQL SLPA I  L  L+ L L +N+L ++P E
Sbjct: 949  LYLYENQLTSVPAEIGQLTALARLELRDNQLTSLPAEIGQLAALEKLSLDSNQLTSVPAE 1008

Query: 237  IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            I  L      LK+L L +N L ++P +I  L  L EL L  N L 
Sbjct: 1009 IGQLTS----LKTLGLSDNMLTSVPADIGQLTSLKELRLGGNQLT 1049



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/218 (35%), Positives = 101/218 (46%), Gaps = 33/218 (15%)

Query: 71   FPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKV 130
             P    + + LR L L  N++T                        SLP ++  L +L+V
Sbjct: 890  VPAELGRLSALRWLSLHGNQVT------------------------SLPAEIGQLTSLEV 925

Query: 131  FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
              L+ NQL   P +I  + +L+ LYL  N L  VP EI +L  L  L L  N LT +P  
Sbjct: 926  LYLTENQLTSVPAEIGQLTSLRELYLYENQLTSVPAEIGQLTALARLELRDNQLTSLPAE 985

Query: 191  FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
             G L  LE L L  NQL S+PA I  L  LK+L L +N L ++P +I  L      LK L
Sbjct: 986  IGQLAALEKLSLDSNQLTSVPAEIGQLTSLKTLGLSDNMLTSVPADIGQLTS----LKEL 1041

Query: 251  LLHNNKLRTLPTEIITLKCLSELSLRDN-----PLVIR 283
             L  N+L ++P EI  L  L  L L  N     P  IR
Sbjct: 1042 RLGGNQLTSVPEEIGQLTSLQGLYLWQNRLTSVPAAIR 1079



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 64/165 (38%), Positives = 88/165 (53%), Gaps = 4/165 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++P ++  L  L+   + GN L   P +I  + +L+ L+L  N L  VP EI +L  +  
Sbjct: 256 AVPAEVGRLTALRELVVGGNALTSVPAEIGLLTSLRELWLSGNRLTSVPEEIGQLTAMTE 315

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N LT +P   G L  LE L L  NQL S+PA I  L  LK L L+NN+L ++P E
Sbjct: 316 LYLNANQLTSLPVEIGQLRSLEMLQLGGNQLTSVPAEIRQLTSLKCLDLNNNQLTSVPAE 375

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I  L      L SL L  N+L ++P EI  L  ++EL L  N L 
Sbjct: 376 IGQLTS----LISLHLGKNQLTSVPAEIGQLTAMTELYLNANQLT 416



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 90/185 (48%), Gaps = 3/185 (1%)

Query: 61   LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
            L L+ N ++  P    + T+L  L L+ N++T +P  I     L  L    N LT  S+P
Sbjct: 903  LSLHGNQVTSLPAEIGQLTSLEVLYLTENQLTSVPAEIGQLTSLRELYLYENQLT--SVP 960

Query: 120  KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             ++  L  L    L  NQL   P +I  +  L+ L L +N L  VP EI +L  L  L L
Sbjct: 961  AEIGQLTALARLELRDNQLTSLPAEIGQLAALEKLSLDSNQLTSVPAEIGQLTSLKTLGL 1020

Query: 180  GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
              N LT +P   G L  L+ L L  NQL S+P  I  L  L+ L L  N+L ++P  I  
Sbjct: 1021 SDNMLTSVPADIGQLTSLKELRLGGNQLTSVPEEIGQLTSLQGLYLWQNRLTSVPAAIRE 1080

Query: 240  LKCLS 244
            L+ + 
Sbjct: 1081 LRAVG 1085


>gi|255070553|ref|XP_002507358.1| predicted protein [Micromonas sp. RCC299]
 gi|226522633|gb|ACO68616.1| predicted protein [Micromonas sp. RCC299]
          Length = 574

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 91/225 (40%), Positives = 123/225 (54%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           +++ L L  N L+  P    + T+L  L+L +N++T +P  I     L  L    N LT 
Sbjct: 145 SLERLYLGGNQLTSVPAEIGRLTSLEELNLKSNQLTSVPAEIGQLASLEKLNLNGNQLT- 203

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            S+P ++  L +LK  +L+GNQL   P  I  +  LK L L +N L  VP EI +L  L 
Sbjct: 204 -SVPAEIGQLTSLKELDLNGNQLTSVPADIGQLTDLKELGLRDNQLTSVPAEIGQLASLE 262

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L +GGN LT +P   G L  LE L L DNQL S+PA I  L  L+ L L +N+L ++P 
Sbjct: 263 KLYVGGNQLTSVPAEIGQLTSLEGLELDDNQLTSVPAEIWQLTSLRVLYLDDNQLTSVPA 322

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI  L  L+E    L L  N+L ++P EI  L  L EL LRDN L
Sbjct: 323 EIGQLTSLTE----LYLSGNQLTSVPAEIGRLTELKELGLRDNQL 363



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/221 (40%), Positives = 119/221 (53%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L  N L+  P    + T+L  LDL NN++T +P  I     L+ L    N LT  S+P
Sbjct: 11  LALDGNELTSVPAEIGQLTSLEVLDLYNNQLTSVPAEIGQLTSLTELYLFGNQLT--SVP 68

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            ++  L +L   +LSGNQL   P ++  + +L+ L+L NN L  VP EI +L  L  L L
Sbjct: 69  AEIGQLTSLTGLDLSGNQLTSVPAEVGQLTSLRELHLWNNRLTSVPAEIGQLTSLEELCL 128

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N LT +P   G L  LE L L  NQL S+PA I  L  L+ L L +N+L ++P EI  
Sbjct: 129 DDNRLTSVPAEIGQLTSLERLYLGGNQLTSVPAEIGRLTSLEELNLKSNQLTSVPAEIGQ 188

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L  L EKL    L+ N+L ++P EI  L  L EL L  N L
Sbjct: 189 LASL-EKLN---LNGNQLTSVPAEIGQLTSLKELDLNGNQL 225



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/240 (37%), Positives = 123/240 (51%), Gaps = 13/240 (5%)

Query: 48  NNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           NN     P  I  L       L+ N L+  P    + T+L  LDLS N++T +P  +   
Sbjct: 38  NNQLTSVPAEIGQLTSLTELYLFGNQLTSVPAEIGQLTSLTGLDLSGNQLTSVPAEVGQL 97

Query: 102 -PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
             L  L   NN LT  S+P ++  L +L+   L  N+L   P +I  + +L+ LYLG N 
Sbjct: 98  TSLRELHLWNNRLT--SVPAEIGQLTSLEELCLDDNRLTSVPAEIGQLTSLERLYLGGNQ 155

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  VP EI +L  L  L+L  N LT +P   G L  LE L L+ NQL S+PA I  L  L
Sbjct: 156 LTSVPAEIGRLTSLEELNLKSNQLTSVPAEIGQLASLEKLNLNGNQLTSVPAEIGQLTSL 215

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           K L L+ N+L ++P +I  L      LK L L +N+L ++P EI  L  L +L +  N L
Sbjct: 216 KELDLNGNQLTSVPADIGQLT----DLKELGLRDNQLTSVPAEIGQLASLEKLYVGGNQL 271



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 115/219 (52%), Gaps = 7/219 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L  N L+  P +  + T+L+ L L +N++T +P  I     L  L    N LT  S+P +
Sbjct: 220 LNGNQLTSVPADIGQLTDLKELGLRDNQLTSVPAEIGQLASLEKLYVGGNQLT--SVPAE 277

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L +L+   L  NQL   P +I  + +L+ LYL +N L  VP EI +L  L  L L G
Sbjct: 278 IGQLTSLEGLELDDNQLTSVPAEIWQLTSLRVLYLDDNQLTSVPAEIGQLTSLTELYLSG 337

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N LT +P   G L +L+ L L DNQL S+P  I  L  L+ L L +N L  LP EI  L 
Sbjct: 338 NQLTSVPAEIGRLTELKELGLRDNQLTSVPEEIWQLTSLRVLYLDDNLLDELPAEIGQLT 397

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            L E    L L  N+L ++P EI  L  L+EL L  N L
Sbjct: 398 SLEE----LGLERNELTSVPAEIWQLTSLTELYLGCNQL 432



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 85/221 (38%), Positives = 114/221 (51%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L  N L+  P    + T L+ L L +N++T +P+ I     L  L   +NLL  + LP
Sbjct: 333 LYLSGNQLTSVPAEIGRLTELKELGLRDNQLTSVPEEIWQLTSLRVLYLDDNLL--DELP 390

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            ++  L +L+   L  N+L   P +I  + +L  LYLG N L  VP EI +L  L  L L
Sbjct: 391 AEIGQLTSLEELGLERNELTSVPAEIWQLTSLTELYLGCNQLTSVPAEIGQLTSLTKLYL 450

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
            G  LT +P   G L  L  L L  NQL SLPA I  L  L+ L L+  +L ++P EI  
Sbjct: 451 SGTKLTSVPAEIGQLTSLRVLYLYGNQLTSLPAEIGQLASLRELYLNGKQLTSVPAEIGQ 510

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L     +LK L L +NKL ++P EI  L  L  L L DN L
Sbjct: 511 LT----ELKELDLRDNKLTSVPEEIWQLTSLRVLYLDDNQL 547



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/244 (34%), Positives = 119/244 (48%), Gaps = 22/244 (9%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           +++ L +  N L+  P    + T+L  L+L +N++T +P  I     L  L   +N LT 
Sbjct: 260 SLEKLYVGGNQLTSVPAEIGQLTSLEGLELDDNQLTSVPAEIWQLTSLRVLYLDDNQLT- 318

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            S+P ++  L +L    LSGNQL   P +I  +  LK L L +N L  VP EI +L  L 
Sbjct: 319 -SVPAEIGQLTSLTELYLSGNQLTSVPAEIGRLTELKELGLRDNQLTSVPEEIWQLTSLR 377

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           VL L  N L ++P   G L  LE L L  N+L S+PA I  L  L  L L  N+L ++P 
Sbjct: 378 VLYLDDNLLDELPAEIGQLTSLEELGLERNELTSVPAEIWQLTSLTELYLGCNQLTSVPA 437

Query: 236 EIITLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           EI  L  L++                    L+ L L+ N+L +LP EI  L  L EL L 
Sbjct: 438 EIGQLTSLTKLYLSGTKLTSVPAEIGQLTSLRVLYLYGNQLTSLPAEIGQLASLRELYLN 497

Query: 277 DNPL 280
              L
Sbjct: 498 GKQL 501



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/204 (35%), Positives = 100/204 (49%), Gaps = 9/204 (4%)

Query: 46  LPNNDYNKKPENIDTL----LLY--HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N     PE I  L    +LY   N L   P    + T+L  L L  N +T +P  I 
Sbjct: 358 LRDNQLTSVPEEIWQLTSLRVLYLDDNLLDELPAEIGQLTSLEELGLERNELTSVPAEIW 417

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L+ L    N LT  S+P ++  L +L    LSG +L   P +I  + +L+ LYL  
Sbjct: 418 QLTSLTELYLGCNQLT--SVPAEIGQLTSLTKLYLSGTKLTSVPAEIGQLTSLRVLYLYG 475

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P EI +L  L  L L G  LT +P   G L +L+ L L DN+L S+P  I  L 
Sbjct: 476 NQLTSLPAEIGQLASLRELYLNGKQLTSVPAEIGQLTELKELDLRDNKLTSVPEEIWQLT 535

Query: 219 MLKSLLLHNNKLRTLPTEIITLKC 242
            L+ L L +N+L ++P  I  LK 
Sbjct: 536 SLRVLYLDDNQLTSVPAAIRELKA 559


>gi|300868028|ref|ZP_07112666.1| Small GTP-binding protein (fragment) [Oscillatoria sp. PCC 6506]
 gi|300333948|emb|CBN57844.1| Small GTP-binding protein (fragment) [Oscillatoria sp. PCC 6506]
          Length = 376

 Score =  137 bits (346), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 98/254 (38%), Positives = 139/254 (54%), Gaps = 15/254 (5%)

Query: 46  LPNNDYNKKPENI------DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN   + PE I       TL L +N L+  P+  +  T L+ L LSNN++T +P+AI 
Sbjct: 73  LSNNKLTEVPEAIASLSQLQTLNLIYNKLTEVPEAIATLTQLQKLYLSNNQLTQVPEAIA 132

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
           +   L TL    N LT   +P+ +++L  L+  NLS NQL + P  I  +  L++LYL N
Sbjct: 133 SLSQLQTLNLNFNQLT--EVPEAIASLSQLRRLNLSYNQLTEVPETIASLTQLEWLYLNN 190

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  VP  I  L +L  LSL  N LT +P+    L QL +L LS+NQL  LP +I++L 
Sbjct: 191 NQLRKVPEAIASLTQLQRLSLSDNELTAVPEAIASLSQLRSLNLSNNQLTELPEAIASLT 250

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+ L L  N+L  LP  I +L     +L+ L L  N+L  +P  I +L  L  LSL DN
Sbjct: 251 QLQELYLVGNQLTELPEAIASLT----QLQELYLVGNELTAVPEAIASLTQLQRLSLSDN 306

Query: 279 PL--VIRFVSDMTY 290
            L  V   ++ +T+
Sbjct: 307 ELTAVPEAIASLTH 320



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/238 (37%), Positives = 129/238 (54%), Gaps = 13/238 (5%)

Query: 50  DYNKKPENIDTLLLYH------NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-P 102
           +  + PE I TL          N L+  P+  +  + L+ L+LSNN++T +P+AI +   
Sbjct: 31  ELTEVPEAIATLTQLQRLDLDCNQLTKVPEAIASLSQLQILNLSNNKLTEVPEAIASLSQ 90

Query: 103 LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLN 162
           L TL    N LT   +P+ ++ L  L+   LS NQL Q P  I  +  L+ L L  N L 
Sbjct: 91  LQTLNLIYNKLT--EVPEAIATLTQLQKLYLSNNQLTQVPEAIASLSQLQTLNLNFNQLT 148

Query: 163 HVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKS 222
            VP  I  L +L  L+L  N LT++P+T   L QLE L L++NQL  +P +I++L  L+ 
Sbjct: 149 EVPEAIASLSQLRRLNLSYNQLTEVPETIASLTQLEWLYLNNNQLRKVPEAIASLTQLQR 208

Query: 223 LLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L L +N+L  +P  I +L     +L+SL L NN+L  LP  I +L  L EL L  N L
Sbjct: 209 LSLSDNELTAVPEAIASLS----QLRSLNLSNNQLTELPEAIASLTQLQELYLVGNQL 262



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 126/228 (55%), Gaps = 7/228 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           + E    L L +  L+  P+  +  T L+ LDL  N++T +P+AI +   L  L   NN 
Sbjct: 18  QQEGATKLDLGYMELTEVPEAIATLTQLQRLDLDCNQLTKVPEAIASLSQLQILNLSNNK 77

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT   +P+ +++L  L+  NL  N+L + P  I  +  L+ LYL NN L  VP  I  L 
Sbjct: 78  LT--EVPEAIASLSQLQTLNLIYNKLTEVPEAIATLTQLQKLYLSNNQLTQVPEAIASLS 135

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           +L  L+L  N LT++P+    L QL  L LS NQL  +P +I++L  L+ L L+NN+LR 
Sbjct: 136 QLQTLNLNFNQLTEVPEAIASLSQLRRLNLSYNQLTEVPETIASLTQLEWLYLNNNQLRK 195

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +P  I +L     +L+ L L +N+L  +P  I +L  L  L+L +N L
Sbjct: 196 VPEAIASLT----QLQRLSLSDNELTAVPEAIASLSQLRSLNLSNNQL 239



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 61/196 (31%), Positives = 88/196 (44%), Gaps = 57/196 (29%)

Query: 24  IKTLDFSYSSLDS--ETLA--TQIELL--PNNDYNKKPENIDTLL------LYHNNLSFF 71
           ++ L+ SY+ L    ET+A  TQ+E L   NN   K PE I +L       L  N L+  
Sbjct: 160 LRRLNLSYNQLTEVPETIASLTQLEWLYLNNNQLRKVPEAIASLTQLQRLSLSDNELTAV 219

Query: 72  PDNASKFTNLRSLDLSNNRITHLPQAI----------------TNFP--------LSTLI 107
           P+  +  + LRSL+LSNN++T LP+AI                T  P        L  L 
Sbjct: 220 PEAIASLSQLRSLNLSNNQLTELPEAIASLTQLQELYLVGNQLTELPEAIASLTQLQELY 279

Query: 108 ARNNLLTA---------------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQIL 146
              N LTA                      ++P+ +++L +L+  +LS NQL Q P  I 
Sbjct: 280 LVGNELTAVPEAIASLTQLQRLSLSDNELTAVPEAIASLTHLQGLDLSYNQLTQVPEAIA 339

Query: 147 DIPTLKYLYLGNNSLN 162
            +  L+ LYL +N LN
Sbjct: 340 SLSQLQELYLDDNPLN 355


>gi|421118980|ref|ZP_15579307.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348320|gb|EKO99146.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 377

 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/228 (43%), Positives = 129/228 (56%), Gaps = 7/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +  NL+ LDLSNN++T LPQ I     L  L   +N LT
Sbjct: 92  KNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLSNNQLTVLPQEIEQLKNLQLLYLHSNRLT 151

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +L KD+  L+NLK  +LS NQL   P +I  +  LK LYL  N     P+EI +L  L
Sbjct: 152 --TLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNL 209

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N +T +P+    L +L+ L LSDNQL +LP  I  LK LKSL L  N+L  LP
Sbjct: 210 KVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILP 269

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            E+  L    E L++L L NN+L+TLP EI  LK L  L L +N L I
Sbjct: 270 KEVGQL----ENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTI 313



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/224 (41%), Positives = 125/224 (55%), Gaps = 7/224 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L+ N L+    +  +  NL+SLDLSNN++T LP  I     L +L    N   
Sbjct: 138 KNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN--Q 195

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+NLKV  L+ NQ+   P +I  +  L+YLYL +N L  +P+EI +L  L
Sbjct: 196 FATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNL 255

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L+ L L +NQL++LP  I  LK L++L L NN+L  LP
Sbjct: 256 KSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILP 315

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK L      L L  N+L TLP EI  LK L  L L +N
Sbjct: 316 QEIGKLKNLL----WLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 355



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 93/229 (40%), Positives = 124/229 (54%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P  +  L L    L   P    K  NL+ L L  N++T LPQ I     L  L  R+N L
Sbjct: 45  PLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 104

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +LPK++  LKNL+V +LS NQL   P +I  +  L+ LYL +N L  + ++I +L  
Sbjct: 105 T--TLPKEIEQLKNLQVLDLSNNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQN 162

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P+    L  L++L LS+NQ  + P  I  L+ LK L L+NN++  L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK    KL+ L L +N+L TLP EI  LK L  L L  N L I
Sbjct: 223 PNEIAKLK----KLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTI 267



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 120/228 (52%), Gaps = 16/228 (7%)

Query: 3   YNYGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLL 62
           Y + +  ++ S D +  +  ++K+LD S + L   TL  +IE L         +N+ +L 
Sbjct: 144 YLHSNRLTTLSKDIEQLQ--NLKSLDLSNNQLT--TLPNEIEQL---------KNLKSLY 190

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L  N  + FP    +  NL+ L L+NN+IT LP  I     L  L   +N L   +LPK+
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLI--TLPKE 248

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  LKNLK  +LS NQL   P ++  +  L+ L L NN L  +P+EI +L  L  L L  
Sbjct: 249 IEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSN 308

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           N LT +P   G L  L  L L  NQL +LP  I  LK L++L L+NN+
Sbjct: 309 NQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQ 356



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/165 (42%), Positives = 93/165 (56%), Gaps = 4/165 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N   ++V +LS  +L+  PI+I  +  L+ LYL  N L  +P+EI +L  
Sbjct: 34  TYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P     L  L+ L LS+NQL  LP  I  LK L+ L LH+N+L TL
Sbjct: 94  LQLLYLRSNRLTTLPKEIEQLKNLQVLDLSNNQLTVLPQEIEQLKNLQLLYLHSNRLTTL 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             +I  L    + LKSL L NN+L TLP EI  LK L  L L +N
Sbjct: 154 SKDIEQL----QNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 55/102 (53%), Gaps = 11/102 (10%)

Query: 188 PDTFGDL-------YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           P T+ DL        ++  L LS  +L++LP  I  LK L+ L LH N+L  LP EI  L
Sbjct: 32  PGTYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQL 91

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           K     L+ L L +N+L TLP EI  LK L  L L +N L +
Sbjct: 92  K----NLQLLYLRSNRLTTLPKEIEQLKNLQVLDLSNNQLTV 129


>gi|418707316|ref|ZP_13268142.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772363|gb|EKR47551.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 424

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/245 (40%), Positives = 133/245 (54%), Gaps = 13/245 (5%)

Query: 46  LPNNDYNKKPENI------DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           LPNN     P+ I        L L +N +   P    K   L+ L L  N++T LPQ I 
Sbjct: 169 LPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIE 228

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L +L   NN LT  +LP+++  L+NLKV  L+ NQL   P +I  +  L+ LYL +
Sbjct: 229 KLQKLESLGLDNNQLT--TLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVS 286

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P+EI +L  L +L LG N LT +P   G L  L+ L LS+NQL ++P  I  L+
Sbjct: 287 NQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQ 346

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+ L L NN+L T+P EI  L+ L E    L L NN+L T+P EI  L+ L  L LR+N
Sbjct: 347 NLQELYLSNNQLTTIPKEIGQLQNLQE----LYLSNNQLITIPKEIGQLQNLQTLYLRNN 402

Query: 279 PLVIR 283
              I 
Sbjct: 403 QFSIE 407



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 129/228 (56%), Gaps = 7/228 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L L    L   P    +  NL+ LDLS+N++  LP+ I     L  L  R+N L
Sbjct: 46  PLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQL 105

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++  L+NL+   LS NQL  FP +I  +  L++L L  N +  +P+EI KL K
Sbjct: 106 TI--LPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQK 163

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P   G L +L+ L LS NQ+++LP  I  L+ L+ L LH N+L TL
Sbjct: 164 LQSLYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTL 223

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L    +KL+SL L NN+L TLP EI  L+ L  L L +N L 
Sbjct: 224 PQEIEKL----QKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLT 267



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/228 (38%), Positives = 125/228 (54%), Gaps = 7/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N+  L L  N L+  P    K  NL+ L LSNN++T  P+ I     L  L    N   
Sbjct: 93  KNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSAN--Q 150

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            +++PK++  L+ L+   L  NQL   P +I  +  L++LYL  N +  +P+EI KL KL
Sbjct: 151 IKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKL 210

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P     L +LE+L L +NQL +LP  I  L+ LK L L+NN+L T+P
Sbjct: 211 QWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIP 270

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            EI  L    + L+ L L +N+L T+P EI  L+ L  L L +N L I
Sbjct: 271 QEIGHL----QNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTI 314



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 95/165 (57%), Gaps = 4/165 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T + L K + N  +++V +LS  +L+  P +I  +  L+ L L +N L  +P+EI +L  
Sbjct: 35  TYQDLTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKN 94

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P   G L  L+ L LS+NQL + P  I  L+ L+ L L  N+++T+
Sbjct: 95  LQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTI 154

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P EI  L    +KL+SL L NN+L TLP EI  L+ L  L L  N
Sbjct: 155 PKEIEKL----QKLQSLYLPNNQLTTLPQEIGKLQKLQWLYLSYN 195



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 69/125 (55%), Gaps = 7/125 (5%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L +N L+  P    K  NL+ L LSNN++T +P+ I     L  L   NN LT
Sbjct: 300 QNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLT 359

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INKL-- 171
             ++PK++  L+NL+   LS NQL   P +I  +  L+ LYL NN  +   +E I KL  
Sbjct: 360 --TIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFSIEEKERIRKLLP 417

Query: 172 -CKLH 175
            C+++
Sbjct: 418 KCQIY 422


>gi|73670787|ref|YP_306802.1| hypothetical protein Mbar_A3344 [Methanosarcina barkeri str.
           Fusaro]
 gi|72397949|gb|AAZ72222.1| hypothetical protein Mbar_A3344 [Methanosarcina barkeri str.
           Fusaro]
          Length = 892

 Score =  137 bits (344), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 118/314 (37%), Positives = 155/314 (49%), Gaps = 29/314 (9%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L  N L+  P    +  NL  LDLS N +T LPQ I     L TL    N 
Sbjct: 14  KEKNLTNLNLSGNQLTQVPQEIGELKNLTMLDLSENTLTILPQEIGELKNLKTLDLSGNQ 73

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L    LP ++  LKNL + NL  NQL Q P +I ++  L  L L NN L  +P EI KL 
Sbjct: 74  LI--QLPSEIGRLKNLTILNLYDNQLTQLPPEIKELKNLTALTLFNNKLTQIPPEIGKLK 131

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L +  N LT +P   G+L  L  L L+ N+L  LP+ I NLK L++L L+ N+L  
Sbjct: 132 NLETLYIYCNQLTQLPPEIGELKNLSILALNKNKLTQLPSEIGNLKNLETLSLYRNQLIE 191

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKP 292
           LP EI  L    E LK+L + NNKL  LP EI  LK L  L+L  NPL        T  P
Sbjct: 192 LPPEIGKL----ENLKTLYIDNNKLTILPPEISELKNLITLNLSANPL--------TSPP 239

Query: 293 PSLLELASRTLKVHEIDYSQEHLPQN------LVQYLESAHHCVNPKCKGVFFDNRIEHI 346
           P   E+ SR L+      +Q    +N      LV   E    C+  +   + +DN +E  
Sbjct: 240 P---EIVSRGLEAIFTYLNQSKTTENNEAKLVLVGNGEVGKTCLAYR---LIYDNFLEDS 293

Query: 347 KFVDF--CGKYRIP 358
           K  +     K++IP
Sbjct: 294 KITEGINISKWKIP 307


>gi|421127222|ref|ZP_15587446.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136033|ref|ZP_15596144.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019767|gb|EKO86581.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410435312|gb|EKP84444.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 427

 Score =  136 bits (343), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/245 (40%), Positives = 133/245 (54%), Gaps = 13/245 (5%)

Query: 46  LPNNDYNKKPENI------DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           LPNN     P+ I        L L +N +   P    K   L+ L L  N++T LPQ I 
Sbjct: 172 LPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIE 231

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L +L   NN LT  +LP+++  L+NLKV  L+ NQL   P +I  +  L+ LYL +
Sbjct: 232 KLQKLESLGLDNNQLT--TLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVS 289

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P+EI +L  L +L LG N LT +P   G L  L+ L LS+NQL ++P  I  L+
Sbjct: 290 NQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQ 349

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+ L L NN+L T+P EI  L+ L E    L L NN+L T+P EI  L+ L  L LR+N
Sbjct: 350 NLQELYLSNNQLTTIPKEIGQLQNLQE----LYLSNNQLITIPKEIGQLQNLQTLYLRNN 405

Query: 279 PLVIR 283
              I 
Sbjct: 406 QFSIE 410



 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 95/227 (41%), Positives = 129/227 (56%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L   P    +  NL+ LDL +N++  LP+ I     L  L  R+N LT
Sbjct: 50  KNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLIILPKEIRQLKNLQMLDLRSNQLT 109

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+   LS NQL  FP +I  +  L++L L  N +  +P+EI KL KL
Sbjct: 110 I--LPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKL 167

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L +L+ L LS NQ+++LP  I  L+ L+ L LH N+L TLP
Sbjct: 168 QSLYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLP 227

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L    +KL+SL L NN+L TLP EI  L+ L  L L +N L 
Sbjct: 228 QEIEKL----QKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLT 270



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/228 (39%), Positives = 126/228 (55%), Gaps = 7/228 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L L    L   P    +  NL+ LDLS+N++  LP+ I     L  L  R+N L
Sbjct: 26  PLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQL 85

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LPK++  LKNL++ +L  NQL   P +I  +  L+ LYL NN L   P+EI KL K
Sbjct: 86  II--LPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQK 143

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N +  IP     L +L++L L +NQL +LP  I  L+ L+ L L  N+++TL
Sbjct: 144 LQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTL 203

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L    +KL+ L LH N+L TLP EI  L+ L  L L +N L 
Sbjct: 204 PQEIEKL----QKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLT 247



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 88/228 (38%), Positives = 125/228 (54%), Gaps = 7/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N+  L L  N L+  P    K  NL+ L LSNN++T  P+ I     L  L    N   
Sbjct: 96  KNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSAN--Q 153

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            +++PK++  L+ L+   L  NQL   P +I  +  L++LYL  N +  +P+EI KL KL
Sbjct: 154 IKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLYLSYNQIKTLPQEIEKLQKL 213

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P     L +LE+L L +NQL +LP  I  L+ LK L L+NN+L T+P
Sbjct: 214 QWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLTTIP 273

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            EI  L    + L+ L L +N+L T+P EI  L+ L  L L +N L I
Sbjct: 274 QEIGHL----QNLQDLYLVSNQLTTIPKEIGQLQNLQMLDLGNNQLTI 317



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/168 (36%), Positives = 91/168 (54%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T + L K + N  +++V +LS  +L+  P +I  +  L+ L L +N L  +P+EI +L  
Sbjct: 15  TYQDLTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKN 74

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N L  +P     L  L+ L L  NQL  LP  I  L+ L+ L L NN+L T 
Sbjct: 75  LQMLDLRSNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTF 134

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L    +KL+ L L  N+++T+P EI  L+ L  L L +N L 
Sbjct: 135 PKEIGKL----QKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLT 178



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 69/125 (55%), Gaps = 7/125 (5%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L +N L+  P    K  NL+ L LSNN++T +P+ I     L  L   NN LT
Sbjct: 303 QNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLT 362

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INKL-- 171
             ++PK++  L+NL+   LS NQL   P +I  +  L+ LYL NN  +   +E I KL  
Sbjct: 363 --TIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFSIEEKERIRKLLP 420

Query: 172 -CKLH 175
            C+++
Sbjct: 421 KCQIY 425


>gi|417764010|ref|ZP_12411983.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353842|gb|EJP05995.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 427

 Score =  136 bits (342), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/245 (40%), Positives = 133/245 (54%), Gaps = 13/245 (5%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           LPNN     P+ I  L       L +N +   P    K   L+ L L  N++T LPQ I 
Sbjct: 172 LPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIE 231

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L +L   NN LT  +LP+++  L+NLKV  L+ NQL   P +I  +  L+ LYL +
Sbjct: 232 KLQKLESLGLDNNQLT--TLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVS 289

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P+EI +L  L +L LG N LT +P   G L  L+ L LS+NQL ++P  I  L+
Sbjct: 290 NQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQ 349

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+ L L NN+L T+P EI  L+ L E    L L NN+L T+P EI  L+ L  L LR+N
Sbjct: 350 NLQELYLSNNQLTTIPKEIGQLQNLQE----LYLSNNQLITIPKEIGQLQNLQTLYLRNN 405

Query: 279 PLVIR 283
              I 
Sbjct: 406 QFSIE 410



 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/227 (42%), Positives = 130/227 (57%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L   P    +  NL+ LDLS+N++  LP+ I     L  L  R+N LT
Sbjct: 50  KNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLT 109

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+   LS NQL  FP +I  +  L++L L  N +  +P+EI KL KL
Sbjct: 110 I--LPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKL 167

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L +L+ L LS NQ+++LP  I  L+ L+ L LH N+L TLP
Sbjct: 168 QSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLP 227

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L    +KL+SL L NN+L TLP EI  L+ L  L L +N L 
Sbjct: 228 QEIEKL----QKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLT 270



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 125/228 (54%), Gaps = 7/228 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L L    L   P    +  NL+ LDLS+N++  LP+ I     L  L   +N L
Sbjct: 26  PLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQL 85

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LPK++  LKNL++ +L  NQL   P +I  +  L+ LYL NN L   P+EI KL K
Sbjct: 86  II--LPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQK 143

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N +  IP     L +L++L L +NQL +LP  I  L+ L+ L L  N+++TL
Sbjct: 144 LQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTL 203

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L    +KL+ L LH N+L TLP EI  L+ L  L L +N L 
Sbjct: 204 PQEIEKL----QKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLT 247



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/251 (37%), Positives = 130/251 (51%), Gaps = 30/251 (11%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L   P    +  NL+ LDL +N++T LP+ I     L  L   NN LT
Sbjct: 73  KNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLT 132

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+ L+  NLS NQ++  P +I  +  L+ LYL NN L  +P+EI KL KL
Sbjct: 133 --TFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKL 190

Query: 175 HVLSLG-----------------------GNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
             L+L                         N LT +P     L +LE+L L +NQL +LP
Sbjct: 191 QWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLP 250

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             I  L+ LK L L+NN+L T+P EI  L    + L+ L L +N+L T+P EI  L+ L 
Sbjct: 251 QEIGQLQNLKVLFLNNNQLTTIPQEIGHL----QNLQDLYLVSNQLTTIPKEIGQLQNLQ 306

Query: 272 ELSLRDNPLVI 282
            L L +N L I
Sbjct: 307 MLDLGNNQLTI 317



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/168 (36%), Positives = 91/168 (54%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T + L K + N  +++V +LS  +L+  P +I  +  L+ L L +N L  +P+EI +L  
Sbjct: 15  TYQDLTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKN 74

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N L  +P     L  L+ L L  NQL  LP  I  L+ L+ L L NN+L T 
Sbjct: 75  LQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTF 134

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L    +KL+ L L  N+++T+P EI  L+ L  L L +N L 
Sbjct: 135 PKEIGKL----QKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLT 178



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 69/125 (55%), Gaps = 7/125 (5%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L +N L+  P    K  NL+ L LSNN++T +P+ I     L  L   NN LT
Sbjct: 303 QNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLT 362

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INKL-- 171
             ++PK++  L+NL+   LS NQL   P +I  +  L+ LYL NN  +   +E I KL  
Sbjct: 363 --TIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFSIEEKERIRKLLP 420

Query: 172 -CKLH 175
            C+++
Sbjct: 421 KCQIY 425


>gi|421118972|ref|ZP_15579299.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348312|gb|EKO99138.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 448

 Score =  135 bits (341), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/245 (40%), Positives = 133/245 (54%), Gaps = 13/245 (5%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           LPNN     P+ I  L       L +N +   P    K   L+ L L  N++T LPQ I 
Sbjct: 193 LPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIE 252

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L +L   NN LT  +LP+++  L+NLKV  L+ NQL   P +I  +  L+ LYL +
Sbjct: 253 KLQKLESLGLDNNQLT--TLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVS 310

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P+EI +L  L +L LG N LT +P   G L  L+ L LS+NQL ++P  I  L+
Sbjct: 311 NQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQTLYLSNNQLTTIPKEIGQLQ 370

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+ L L NN+L T+P EI  L+ L E    L L NN+L T+P EI  L+ L  L LR+N
Sbjct: 371 NLQELYLSNNQLTTIPKEIGQLQNLQE----LYLSNNQLITIPKEIGQLQNLQTLYLRNN 426

Query: 279 PLVIR 283
              I 
Sbjct: 427 QFSIE 431



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/226 (42%), Positives = 129/226 (57%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L   P    +  NL+ LDL +N++  LP+ I     L  L  R+N LT
Sbjct: 71  KNLQMLDLSDNQLIILPKEIRQLKNLQMLDLHSNQLIILPKEIRQLKNLQMLDLRSNQLT 130

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+   LS NQL  FP +I  +  L++L L  N +  +P+EI KL KL
Sbjct: 131 I--LPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKL 188

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L +L+ L LS NQ+++LP  I  L+ L+ L LH N+L TLP
Sbjct: 189 QSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLP 248

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L    +KL+SL L NN+L TLP EI  L+ L  L L +N L
Sbjct: 249 QEIEKL----QKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQL 290



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/227 (39%), Positives = 126/227 (55%), Gaps = 7/227 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L+L    L   P    +  NL+ LDLS+N++  LP+ I     L  L   +N L
Sbjct: 47  PLDVRVLILSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLHSNQL 106

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LPK++  LKNL++ +L  NQL   P +I  +  L+ LYL NN L   P+EI KL K
Sbjct: 107 II--LPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQK 164

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N +  IP     L +L++L L +NQL +LP  I  L+ L+ L L  N+++TL
Sbjct: 165 LQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTL 224

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P EI  L    +KL+ L LH N+L TLP EI  L+ L  L L +N L
Sbjct: 225 PQEIEKL----QKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQL 267



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 93/251 (37%), Positives = 131/251 (52%), Gaps = 30/251 (11%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L+ N L   P    +  NL+ LDL +N++T LP+ I     L  L   NN LT
Sbjct: 94  KNLQMLDLHSNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLT 153

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+ L+  NLS NQ++  P +I  +  L+ LYL NN L  +P+EI KL KL
Sbjct: 154 --TFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKL 211

Query: 175 HVLSLG-----------------------GNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
             L+L                         N LT +P     L +LE+L L +NQL +LP
Sbjct: 212 QWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLP 271

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             I  L+ LK L L+NN+L T+P EI  L    + L+ L L +N+L T+P EI  L+ L 
Sbjct: 272 QEIGQLQNLKVLFLNNNQLTTIPQEIGHL----QNLQDLYLVSNQLTTIPKEIGQLQNLQ 327

Query: 272 ELSLRDNPLVI 282
            L L +N L I
Sbjct: 328 MLDLGNNQLTI 338



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 70/125 (56%), Gaps = 7/125 (5%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L +N L+  P    K  NL++L LSNN++T +P+ I     L  L   NN LT
Sbjct: 324 QNLQMLDLGNNQLTILPKEIGKLQNLQTLYLSNNQLTTIPKEIGQLQNLQELYLSNNQLT 383

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INKL-- 171
             ++PK++  L+NL+   LS NQL   P +I  +  L+ LYL NN  +   +E I KL  
Sbjct: 384 --TIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFSIEEKERIRKLLP 441

Query: 172 -CKLH 175
            C+++
Sbjct: 442 KCQIY 446



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 61/111 (54%), Gaps = 4/111 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+ + F +   +  LILS+ +L++LP  I  LK L+ L L +N+L 
Sbjct: 25  CEIQTEEVEPKTYMDLTEAFQNPLDVRVLILSEQKLKALPKKIGQLKNLQMLDLSDNQLI 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            LP EI  LK     L+ L LH+N+L  LP EI  LK L  L LR N L I
Sbjct: 85  ILPKEIRQLK----NLQMLDLHSNQLIILPKEIRQLKNLQMLDLRSNQLTI 131


>gi|418728103|ref|ZP_13286683.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777148|gb|EKR57116.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 447

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/245 (40%), Positives = 133/245 (54%), Gaps = 13/245 (5%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           LPNN     P+ I  L       L +N +   P    K   L+ L L  N++T LPQ I 
Sbjct: 192 LPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIE 251

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L +L   NN LT  +LP+++  L+NLKV  L+ NQL   P +I  +  L+ LYL +
Sbjct: 252 KLQKLESLGLDNNQLT--TLPQEIGQLQNLKVLFLNNNQLTTIPQEIGHLQNLQDLYLVS 309

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P+EI +L  L +L LG N LT +P   G L  L+ L LS+NQL ++P  I  L+
Sbjct: 310 NQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQ 369

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+ L L NN+L T+P EI  L+ L E    L L NN+L T+P EI  L+ L  L LR+N
Sbjct: 370 NLQELYLSNNQLTTIPKEIGQLQNLQE----LYLSNNQLITIPKEIGQLQNLQTLYLRNN 425

Query: 279 PLVIR 283
              I 
Sbjct: 426 QFSIE 430



 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 96/227 (42%), Positives = 130/227 (57%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L   P    +  NL+ LDLS+N++  LP+ I     L  L  R+N LT
Sbjct: 70  KNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLT 129

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+   LS NQL  FP +I  +  L++L L  N +  +P+EI KL KL
Sbjct: 130 I--LPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKL 187

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L +L+ L LS NQ+++LP  I  L+ L+ L LH N+L TLP
Sbjct: 188 QSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLP 247

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L    +KL+SL L NN+L TLP EI  L+ L  L L +N L 
Sbjct: 248 QEIEKL----QKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLT 290



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 125/228 (54%), Gaps = 7/228 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L L    L   P    +  NL+ LDLS+N++  LP+ I     L  L   +N L
Sbjct: 46  PLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQMLDLSDNQL 105

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LPK++  LKNL++ +L  NQL   P +I  +  L+ LYL NN L   P+EI KL K
Sbjct: 106 II--LPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQK 163

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N +  IP     L +L++L L +NQL +LP  I  L+ L+ L L  N+++TL
Sbjct: 164 LQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTL 223

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L    +KL+ L LH N+L TLP EI  L+ L  L L +N L 
Sbjct: 224 PQEIEKL----QKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLT 267



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/251 (37%), Positives = 130/251 (51%), Gaps = 30/251 (11%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L   P    +  NL+ LDL +N++T LP+ I     L  L   NN LT
Sbjct: 93  KNLQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLT 152

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+ L+  NLS NQ++  P +I  +  L+ LYL NN L  +P+EI KL KL
Sbjct: 153 --TFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKL 210

Query: 175 HVLSLG-----------------------GNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
             L+L                         N LT +P     L +LE+L L +NQL +LP
Sbjct: 211 QWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLP 270

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             I  L+ LK L L+NN+L T+P EI  L    + L+ L L +N+L T+P EI  L+ L 
Sbjct: 271 QEIGQLQNLKVLFLNNNQLTTIPQEIGHL----QNLQDLYLVSNQLTTIPKEIGQLQNLQ 326

Query: 272 ELSLRDNPLVI 282
            L L +N L I
Sbjct: 327 MLDLGNNQLTI 337



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 62/168 (36%), Positives = 91/168 (54%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T + L K + N  +++V +LS  +L+  P +I  +  L+ L L +N L  +P+EI +L  
Sbjct: 35  TYQDLTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQMLDLSDNQLIILPKEIRQLKN 94

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N L  +P     L  L+ L L  NQL  LP  I  L+ L+ L L NN+L T 
Sbjct: 95  LQMLDLSDNQLIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLTTF 154

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L    +KL+ L L  N+++T+P EI  L+ L  L L +N L 
Sbjct: 155 PKEIGKL----QKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLT 198



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 69/125 (55%), Gaps = 7/125 (5%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L +N L+  P    K  NL+ L LSNN++T +P+ I     L  L   NN LT
Sbjct: 323 QNLQMLDLGNNQLTILPKEIGKLQNLQELYLSNNQLTTIPKEIGQLQNLQELYLSNNQLT 382

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INKL-- 171
             ++PK++  L+NL+   LS NQL   P +I  +  L+ LYL NN  +   +E I KL  
Sbjct: 383 --TIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFSIEEKERIRKLLP 440

Query: 172 -CKLH 175
            C+++
Sbjct: 441 KCQIY 445


>gi|418701730|ref|ZP_13262652.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759294|gb|EKR25509.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 377

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/228 (43%), Positives = 129/228 (56%), Gaps = 7/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P+   +  NL+ LDL +N++T LPQ I     L  L   +N LT
Sbjct: 92  KNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLT 151

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +L KD+  L+NLK  NLS NQL   P +I  +  LK LYL  N     P+EI +L  L
Sbjct: 152 --TLSKDIEQLQNLKSLNLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNL 209

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N +T +P+    L +L+ L LSDNQL +LP  I  LK LKSL L  N+L  LP
Sbjct: 210 KVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILP 269

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            E+  L    E L++L L NN+L+TLP EI  LK L  L L +N L I
Sbjct: 270 KEVGQL----ENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTI 313



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/224 (40%), Positives = 126/224 (56%), Gaps = 7/224 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L+ N L+    +  +  NL+SL+LSNN++T LP  I     L +L    N   
Sbjct: 138 KNLQLLYLHSNRLTTLSKDIEQLQNLKSLNLSNNQLTTLPNEIEQLKNLKSLYLSEN--Q 195

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+NLKV  L+ NQ+   P +I  +  L+YLYL +N L  +P+EI +L  L
Sbjct: 196 FATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNL 255

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L+ L L +NQL++LP  I  LK L++L L NN+L  LP
Sbjct: 256 KSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILP 315

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK L      L L  N+L TLP EI  LK L  L+L +N
Sbjct: 316 QEIGKLKNLL----WLSLVYNQLTTLPNEIEQLKNLQTLNLWNN 355



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 90/229 (39%), Positives = 124/229 (54%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P  +  L+L    L   P    +  NL+ L L  N++T LPQ I     L  L  R+N L
Sbjct: 45  PLEVRVLILSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 104

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +LP ++  LKNL+V +L  NQL   P +I  +  L+ LYL +N L  + ++I +L  
Sbjct: 105 T--TLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQN 162

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N LT +P+    L  L++L LS+NQ  + P  I  L+ LK L L+NN++  L
Sbjct: 163 LKSLNLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK    KL+ L L +N+L TLP EI  LK L  L L  N L I
Sbjct: 223 PNEIAKLK----KLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTI 267



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 122/237 (51%), Gaps = 16/237 (6%)

Query: 3   YNYGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLL 62
           Y + +  ++ S D +  +  ++K+L+ S + L   TL  +IE L         +N+ +L 
Sbjct: 144 YLHSNRLTTLSKDIEQLQ--NLKSLNLSNNQLT--TLPNEIEQL---------KNLKSLY 190

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L  N  + FP    +  NL+ L L+NN+IT LP  I     L  L   +N L   +LPK+
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLI--TLPKE 248

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  LKNLK  +LS NQL   P ++  +  L+ L L NN L  +P+EI +L  L  L L  
Sbjct: 249 IEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSN 308

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           N LT +P   G L  L  L L  NQL +LP  I  LK L++L L NN+  +   E I
Sbjct: 309 NQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLNLWNNQFSSQEKEKI 365



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 92/165 (55%), Gaps = 4/165 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T + L K + N   ++V  LS  +L+  PI+I  +  L+ LYL  N L  +P+EI +L  
Sbjct: 34  TYQDLTKALQNPLEVRVLILSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P+    L  L+ L L  NQL  LP  I  LK L+ L LH+N+L TL
Sbjct: 94  LQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTL 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             +I  L    + LKSL L NN+L TLP EI  LK L  L L +N
Sbjct: 154 SKDIEQL----QNLKSLNLSNNQLTTLPNEIEQLKNLKSLYLSEN 194



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 55/102 (53%), Gaps = 11/102 (10%)

Query: 188 PDTFGDL-------YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           P T+ DL        ++  LILS  +L++LP  I  LK L+ L LH N+L  LP EI  L
Sbjct: 32  PGTYQDLTKALQNPLEVRVLILSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQL 91

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           K     L+ L L +N+L TLP EI  LK L  L L  N L +
Sbjct: 92  K----NLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTV 129


>gi|417761876|ref|ZP_12409877.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417776956|ref|ZP_12424785.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418673273|ref|ZP_13234595.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942287|gb|EKN87903.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410573245|gb|EKQ36298.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410579766|gb|EKQ47605.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 374

 Score =  135 bits (341), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/245 (40%), Positives = 133/245 (54%), Gaps = 13/245 (5%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           LPNN     P+ I  L       L +N +   P    K   L+ L L  N++T LPQ I 
Sbjct: 119 LPNNQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIE 178

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L +L   NN LT  +LP+++  L+NLKV  L+ NQL   P +I  +  L+ LYL +
Sbjct: 179 KLQKLESLGLDNNQLT--TLPQEIGQLQNLKVLFLNNNQLTTLPQEIGHLQNLQDLYLVS 236

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P+EI +L  L +L LG N LT +P   G L  L+ L LS+NQL ++P  I  L+
Sbjct: 237 NQLTTIPKEIGQLQNLQMLDLGNNQLTILPKEIGKLQNLQWLYLSNNQLTTIPKEIGQLQ 296

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+ L L NN+L T+P EI  L+ L E    L L NN+L T+P EI  L+ L  L LR+N
Sbjct: 297 NLQELYLSNNQLTTIPKEIGQLQNLQE----LYLSNNQLITIPKEIGQLQNLQTLYLRNN 352

Query: 279 PLVIR 283
              I 
Sbjct: 353 QFSIE 357



 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 95/220 (43%), Positives = 126/220 (57%), Gaps = 7/220 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L  N L   P    +  NL+ LDLS+N+I  LP+ I     L  L  R+N LT   LPK+
Sbjct: 4   LSDNQLIILPKEIRQLKNLQMLDLSDNQIIILPKEIRQLKNLQMLDLRSNQLTI--LPKE 61

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L+NL+   LS NQL  FP +I  +  L++L L  N +  +P+EI KL KL  L L  
Sbjct: 62  IGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPN 121

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N LT +P   G L +L+ L LS NQ+++LP  I  L+ L+ L LH N+L TLP EI  L 
Sbjct: 122 NQLTTLPQEIGKLQKLQWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKL- 180

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
              +KL+SL L NN+L TLP EI  L+ L  L L +N L 
Sbjct: 181 ---QKLESLGLDNNQLTTLPQEIGQLQNLKVLFLNNNQLT 217



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/251 (37%), Positives = 130/251 (51%), Gaps = 30/251 (11%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N +   P    +  NL+ LDL +N++T LP+ I     L  L   NN LT
Sbjct: 20  KNLQMLDLSDNQIIILPKEIRQLKNLQMLDLRSNQLTILPKEIGKLQNLQELYLSNNQLT 79

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+ L+  NLS NQ++  P +I  +  L+ LYL NN L  +P+EI KL KL
Sbjct: 80  --TFPKEIGKLQKLQWLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGKLQKL 137

Query: 175 HVLSLG-----------------------GNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
             L+L                         N LT +P     L +LE+L L +NQL +LP
Sbjct: 138 QWLNLSYNQIKTLPQEIEKLQKLQWLYLHKNQLTTLPQEIEKLQKLESLGLDNNQLTTLP 197

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             I  L+ LK L L+NN+L TLP EI  L    + L+ L L +N+L T+P EI  L+ L 
Sbjct: 198 QEIGQLQNLKVLFLNNNQLTTLPQEIGHL----QNLQDLYLVSNQLTTIPKEIGQLQNLQ 253

Query: 272 ELSLRDNPLVI 282
            L L +N L I
Sbjct: 254 MLDLGNNQLTI 264



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/149 (40%), Positives = 87/149 (58%), Gaps = 4/149 (2%)

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
           + +LS NQL   P +I  +  L+ L L +N +  +P+EI +L  L +L L  N LT +P 
Sbjct: 1   MLDLSDNQLIILPKEIRQLKNLQMLDLSDNQIIILPKEIRQLKNLQMLDLRSNQLTILPK 60

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
             G L  L+ L LS+NQL + P  I  L+ L+ L L  N+++T+P EI  L    +KL+S
Sbjct: 61  EIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLNLSANQIKTIPKEIEKL----QKLQS 116

Query: 250 LLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           L L NN+L TLP EI  L+ L  L+L  N
Sbjct: 117 LYLPNNQLTTLPQEIGKLQKLQWLNLSYN 145



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/125 (36%), Positives = 69/125 (55%), Gaps = 7/125 (5%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L +N L+  P    K  NL+ L LSNN++T +P+ I     L  L   NN LT
Sbjct: 250 QNLQMLDLGNNQLTILPKEIGKLQNLQWLYLSNNQLTTIPKEIGQLQNLQELYLSNNQLT 309

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INKL-- 171
             ++PK++  L+NL+   LS NQL   P +I  +  L+ LYL NN  +   +E I KL  
Sbjct: 310 --TIPKEIGQLQNLQELYLSNNQLITIPKEIGQLQNLQTLYLRNNQFSIEEKERIRKLLP 367

Query: 172 -CKLH 175
            C+++
Sbjct: 368 KCQIY 372


>gi|429962971|gb|ELA42515.1| hypothetical protein VICG_00614 [Vittaforma corneae ATCC 50505]
          Length = 835

 Score =  135 bits (340), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 92/225 (40%), Positives = 125/225 (55%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L L  NNL   P    +  NL+ LDL NN++  LP  I     L  L   +N L A
Sbjct: 68  NLEKLDLKGNNLKALPPEIGELKNLQHLDLRNNKLESLPPEIEELKNLQHLDLGDNKLKA 127

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP ++  LKNL+  +L  NQ E FP  I  +  L+ L L NN     P EI +L KL 
Sbjct: 128 --LPYEVEELKNLQHLDLGYNQFESFPTVIRKLKNLERLILNNNKFGLFPIEIAELKKLQ 185

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L L GN L  +PD  G++ +L  L L DN+LES P  I+ L+ L++L L  N+  + PT
Sbjct: 186 ILYLRGNKLKLLPDEIGEMKELRELGLDDNELESFPTVIAELRKLQTLDLGYNEFESFPT 245

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            I+ LK     L+ L L++NKL+ LP EI  L+ L EL+LR N L
Sbjct: 246 VIVKLK----NLQYLFLNDNKLKLLPDEIGELENLRELNLRGNKL 286



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/213 (38%), Positives = 114/213 (53%), Gaps = 7/213 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNN 111
           +K +N++ L+L +N    FP   ++   L+ L L  N++  LP  I     L  L   +N
Sbjct: 156 RKLKNLERLILNNNKFGLFPIEIAELKKLQILYLRGNKLKLLPDEIGEMKELRELGLDDN 215

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            L  ES P  ++ L+ L+  +L  N+ E FP  I+ +  L+YL+L +N L  +P EI +L
Sbjct: 216 EL--ESFPTVIAELRKLQTLDLGYNEFESFPTVIVKLKNLQYLFLNDNKLKLLPDEIGEL 273

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L+L GN L  +P   G+L  L  L L  N LESLP  I  LK L  L L NNK+ 
Sbjct: 274 ENLRELNLRGNKLETLPPVIGELENLYVLELYKNNLESLPDVIGKLKNLGMLNLGNNKIE 333

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           TLP  I  L+ L E    L L +NKL TLP EI
Sbjct: 334 TLPAAIGELQNLRE----LYLSDNKLETLPVEI 362



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 97/184 (52%), Gaps = 4/184 (2%)

Query: 97  AITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL 156
           +  N+P+ T +          +  D+  L NL+  +L GN L+  P +I ++  L++L L
Sbjct: 38  SFRNYPVDTTVISICRQGIRFIGSDIGRLVNLEKLDLKGNNLKALPPEIGELKNLQHLDL 97

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
            NN L  +P EI +L  L  L LG N L  +P    +L  L+ L L  NQ ES P  I  
Sbjct: 98  RNNKLESLPPEIEELKNLQHLDLGDNKLKALPYEVEELKNLQHLDLGYNQFESFPTVIRK 157

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           LK L+ L+L+NNK    P EI  LK    KL+ L L  NKL+ LP EI  +K L EL L 
Sbjct: 158 LKNLERLILNNNKFGLFPIEIAELK----KLQILYLRGNKLKLLPDEIGEMKELRELGLD 213

Query: 277 DNPL 280
           DN L
Sbjct: 214 DNEL 217



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/179 (35%), Positives = 90/179 (50%), Gaps = 5/179 (2%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
             +++LLP  D   + + +  L L  N L  FP   ++   L++LDL  N     P  I 
Sbjct: 191 GNKLKLLP--DEIGEMKELRELGLDDNELESFPTVIAELRKLQTLDLGYNEFESFPTVIV 248

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L  L   +N L    LP ++  L+NL+  NL GN+LE  P  I ++  L  L L  
Sbjct: 249 KLKNLQYLFLNDNKLKL--LPDEIGELENLRELNLRGNKLETLPPVIGELENLYVLELYK 306

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           N+L  +P  I KL  L +L+LG N +  +P   G+L  L  L LSDN+LE+LP  I  L
Sbjct: 307 NNLESLPDVIGKLKNLGMLNLGNNKIETLPAAIGELQNLRELYLSDNKLETLPVEIEKL 365


>gi|418668175|ref|ZP_13229578.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756032|gb|EKR17659.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 402

 Score =  135 bits (339), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 102/261 (39%), Positives = 141/261 (54%), Gaps = 18/261 (6%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           +++TL   Y+ L   TL+ +I  L         +N+  L L +N L+  P    +  NL+
Sbjct: 118 NLQTLGLGYNQLT--TLSQEIGQL---------QNLKVLFLNNNQLTTLPKEIEQLKNLQ 166

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           +L L NN+I  +P  I     L  L    N    +++PK++  L+NL+  NL  NQL+  
Sbjct: 167 TLGLGNNQIKIIPNGIWQLQNLQKLYLDYN--QIKTIPKEIGQLQNLQELNLWNNQLKTL 224

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P +I  +  L+ L+LG+N L  +P EI +L  L  L L  N LT +P   G L  L+ L 
Sbjct: 225 PKEIEQLKNLQTLHLGSNQLTTLPNEIEQLKNLQTLDLYYNQLTTLPQEIGQLQNLQELS 284

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           L  NQL +LP  I  L+ LKSL L NN+L TLP EI  L    + LKSL L NN+L TLP
Sbjct: 285 LYYNQLTALPKEIGQLQNLKSLDLRNNQLTTLPIEIGQL----QNLKSLDLRNNQLTTLP 340

Query: 262 TEIITLKCLSELSLRDNPLVI 282
            EI  L+ L  L LR+N L I
Sbjct: 341 IEIGQLQNLKSLDLRNNQLTI 361



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/230 (40%), Positives = 125/230 (54%), Gaps = 7/230 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K P ++  L L    L+  P    +  NL+SLDL+NN+   LP+ I     L  L   NN
Sbjct: 45  KNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNN 104

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  +LPK++  LKNL+   L  NQL     +I  +  LK L+L NN L  +P+EI +L
Sbjct: 105 QLT--TLPKEIEQLKNLQTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQLTTLPKEIEQL 162

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L LG N +  IP+    L  L+ L L  NQ++++P  I  L+ L+ L L NN+L+
Sbjct: 163 KNLQTLGLGNNQIKIIPNGIWQLQNLQKLYLDYNQIKTIPKEIGQLQNLQELNLWNNQLK 222

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           TLP EI  LK     L++L L +N+L TLP EI  LK L  L L  N L 
Sbjct: 223 TLPKEIEQLK----NLQTLHLGSNQLTTLPNEIEQLKNLQTLDLYYNQLT 268



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 94/186 (50%), Gaps = 19/186 (10%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLS  +L   P +I  +  LK L L NN    +P+EI +L  
Sbjct: 36  TYRDLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N LT +P     L  L+ L L  NQL +L   I  L+ LK L L+NN+L TL
Sbjct: 96  LQELNLWNNQLTTLPKEIEQLKNLQTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQLTTL 155

Query: 234 PTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           P EI  LK L                    + L+ L L  N+++T+P EI  L+ L EL+
Sbjct: 156 PKEIEQLKNLQTLGLGNNQIKIIPNGIWQLQNLQKLYLDYNQIKTIPKEIGQLQNLQELN 215

Query: 275 LRDNPL 280
           L +N L
Sbjct: 216 LWNNQL 221



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/110 (38%), Positives = 56/110 (50%), Gaps = 4/110 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+     +   +  L LS  +L +LP  I  L+ LKSL L NN+ +
Sbjct: 25  CEIQAEKIKPGTYRDLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFK 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           TLP EI  L+ L E    L L NN+L TLP EI  LK L  L L  N L 
Sbjct: 85  TLPKEIGQLQNLQE----LNLWNNQLTTLPKEIEQLKNLQTLGLGYNQLT 130


>gi|418752844|ref|ZP_13309101.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409966796|gb|EKO34636.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 539

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 94/229 (41%), Positives = 128/229 (55%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +++  L L+ N L+  P    K  +L+ L L  N++T +P+ I     L +L    N 
Sbjct: 294 KLQSLQRLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKEIGKLQSLQSLTLWGNQ 353

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LPK++  L++L+   L  NQL   P +I  +  L+ L L  N L  +P+EI KL 
Sbjct: 354 LT--TLPKEIGKLQSLQELILGKNQLTTIPKEIWQLQYLQRLSLSFNQLTAIPKEIEKLQ 411

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N LT +P   G+L +L+ L L  NQL +LP  I  L+ LK L L+NNKL T
Sbjct: 412 NLQKLHLRNNQLTTLPKEIGNLQKLQELDLGYNQLTALPEEIGKLQNLKDLYLNNNKLTT 471

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP EI  L    +KLK L L+NNKL TLP EI  L+ L  L L DNP +
Sbjct: 472 LPKEIGKL----QKLKDLYLNNNKLTTLPKEIEKLQKLKNLHLADNPFL 516



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 92/229 (40%), Positives = 125/229 (54%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K + +  L L  N  +  P    K  NL+ L+L +NR T LP+ I N   L  L   +N 
Sbjct: 225 KLQKLKELHLGSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIGNLQKLQKLSLAHNQ 284

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LPK++  L++L+   L GNQL   P +I  + +L+ L LG N L  +P+EI KL 
Sbjct: 285 LT--TLPKEIGKLQSLQRLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKEIGKLQ 342

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L+L GN LT +P   G L  L+ LIL  NQL ++P  I  L+ L+ L L  N+L  
Sbjct: 343 SLQSLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKEIWQLQYLQRLSLSFNQLTA 402

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +P EI  L    + L+ L L NN+L TLP EI  L+ L EL L  N L 
Sbjct: 403 IPKEIEKL----QNLQKLHLRNNQLTTLPKEIGNLQKLQELDLGYNQLT 447



 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 92/243 (37%), Positives = 128/243 (52%), Gaps = 9/243 (3%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           + Q   LP   +N   + +  L L  N L+  P+   K   L+ L L  N+ T LP+ I 
Sbjct: 167 SNQFTTLPKEIWN--LQKLQKLSLGRNQLTTLPEEIGKLQKLKELHLDGNQFTTLPKEIG 224

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L  L   +N  T  +LPK++  L+NL+  NL  N+    P +I ++  L+ L L +
Sbjct: 225 KLQKLKELHLGSNRFT--TLPKEIKKLQNLQWLNLDSNRFTTLPKEIGNLQKLQKLSLAH 282

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P+EI KL  L  L+L GN LT +P   G L  L+ LIL  NQL ++P  I  L+
Sbjct: 283 NQLTTLPKEIGKLQSLQRLTLWGNQLTTLPKEIGKLQSLQELILGKNQLTTIPKEIGKLQ 342

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+SL L  N+L TLP EI  L+ L E    L+L  N+L T+P EI  L+ L  LSL  N
Sbjct: 343 SLQSLTLWGNQLTTLPKEIGKLQSLQE----LILGKNQLTTIPKEIWQLQYLQRLSLSFN 398

Query: 279 PLV 281
            L 
Sbjct: 399 QLT 401



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/230 (39%), Positives = 127/230 (55%), Gaps = 9/230 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNN 111
           K +N+  L L  N L+  P       NL+ L+L++N+ T LP+ I N   L  L + RN 
Sbjct: 133 KLQNLRDLDLSSNQLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQ 192

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
           L T   LP+++  L+ LK  +L GNQ    P +I  +  LK L+LG+N    +P+EI KL
Sbjct: 193 LTT---LPEEIGKLQKLKELHLDGNQFTTLPKEIGKLQKLKELHLGSNRFTTLPKEIKKL 249

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L+L  N  T +P   G+L +L+ L L+ NQL +LP  I  L+ L+ L L  N+L 
Sbjct: 250 QNLQWLNLDSNRFTTLPKEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWGNQLT 309

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           TLP EI  L+ L E    L+L  N+L T+P EI  L+ L  L+L  N L 
Sbjct: 310 TLPKEIGKLQSLQE----LILGKNQLTTIPKEIGKLQSLQSLTLWGNQLT 355



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 96/165 (58%), Gaps = 4/165 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++  L+NL+  +LS NQL   P +I ++  L+ L L +N    +P+EI  L KL  
Sbjct: 126 TLPKEIGKLQNLRDLDLSSNQLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQK 185

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           LSLG N LT +P+  G L +L+ L L  NQ  +LP  I  L+ LK L L +N+  TLP E
Sbjct: 186 LSLGRNQLTTLPEEIGKLQKLKELHLDGNQFTTLPKEIGKLQKLKELHLGSNRFTTLPKE 245

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I  L    + L+ L L +N+  TLP EI  L+ L +LSL  N L 
Sbjct: 246 IKKL----QNLQWLNLDSNRFTTLPKEIGNLQKLQKLSLAHNQLT 286



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 80/153 (52%), Gaps = 8/153 (5%)

Query: 134 SGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGD 193
           S + L   P +I  +  L+ L L +N L  +P+EI  L  L  L+L  N  T +P    +
Sbjct: 120 SNDPLWTLPKEIGKLQNLRDLDLSSNQLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWN 179

Query: 194 LYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLH 253
           L +L+ L L  NQL +LP  I  L+ LK L L  N+  TLP EI  L    +KLK L L 
Sbjct: 180 LQKLQKLSLGRNQLTTLPEEIGKLQKLKELHLDGNQFTTLPKEIGKL----QKLKELHLG 235

Query: 254 NNKLRTLPTEIITLKCLSELSLRDNPLVIRFVS 286
           +N+  TLP EI  L+ L  L+L  N    RF +
Sbjct: 236 SNRFTTLPKEIKKLQNLQWLNLDSN----RFTT 264



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 61/130 (46%), Gaps = 24/130 (18%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNL 112
           +K +N+  L L +N L+  P        L+ LDL  N++T                    
Sbjct: 408 EKLQNLQKLHLRNNQLTTLPKEIGNLQKLQELDLGYNQLT-------------------- 447

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
               +LP+++  L+NLK   L+ N+L   P +I  +  LK LYL NN L  +P+EI KL 
Sbjct: 448 ----ALPEEIGKLQNLKDLYLNNNKLTTLPKEIGKLQKLKDLYLNNNKLTTLPKEIEKLQ 503

Query: 173 KLHVLSLGGN 182
           KL  L L  N
Sbjct: 504 KLKNLHLADN 513


>gi|45656720|ref|YP_000806.1| hypothetical protein LIC10829 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421084297|ref|ZP_15545160.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102948|ref|ZP_15563550.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599956|gb|AAS69443.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367263|gb|EKP22649.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433197|gb|EKP77545.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 402

 Score =  135 bits (339), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 113/295 (38%), Positives = 151/295 (51%), Gaps = 38/295 (12%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLP--------NNDYNKKPE------NIDTLLLYHNNL 68
           ++K+L+ SY+ +  +T+  +IE L         NN     P+      N+ +L L  N L
Sbjct: 95  NLKSLNLSYNQI--KTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRL 152

Query: 69  SFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKN 127
           +  P    +  NL+SLDLS NR+T LPQ I +   L  L   +N LT   LP ++  LKN
Sbjct: 153 TTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTI--LPNEIGQLKN 210

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           L+  NL  N+L     +I  +  LK L L +N L   P+EI +L  L VL LG N LT +
Sbjct: 211 LQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTL 270

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS--- 244
           P+  G L  L+ L L  NQL +LP  I  LK L+ L L  N+L+TLP EI  LK L    
Sbjct: 271 PEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQTLY 330

Query: 245 ----------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
                           + LK L L+NN+L TLP EI  LK L EL L +N L I 
Sbjct: 331 LGYNQLTVLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQLSIE 385



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 92/227 (40%), Positives = 125/227 (55%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N+  L L  N L+  P    +  NLR L+LS N+I  +P+ I     L +L   NN LT
Sbjct: 2   KNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLT 61

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+++  L+ L+   L  NQL   P +I  +  LK L L  N +  +P+EI KL KL
Sbjct: 62  --TLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKL 119

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L++L LS N+L +LP  I  L+ L+SL L  N+L TLP
Sbjct: 120 QSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLP 179

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L+ L E    L L +N+L  LP EI  LK L  L+LR+N L 
Sbjct: 180 QEIGHLQNLQE----LYLVSNQLTILPNEIGQLKNLQTLNLRNNRLT 222



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 126/228 (55%), Gaps = 7/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N+  L L  N +   P    K   L+SL L NN++T LPQ I     L  L    N LT
Sbjct: 25  KNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLT 84

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+++  LKNLK  NLS NQ++  P +I  +  L+ L L NN L  +P+EI +L  L
Sbjct: 85  --TLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNL 142

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L++L LS N+L +LP  I +L+ L+ L L +N+L  LP
Sbjct: 143 QSLDLSTNRLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTILP 202

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            EI  LK     L++L L NN+L TL  EI  L+ L  L LR N L I
Sbjct: 203 NEIGQLK----NLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTI 246



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 99/267 (37%), Positives = 135/267 (50%), Gaps = 13/267 (4%)

Query: 46  LPNNDYNKKPENIDTL----LLY--HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           LPNN     P+ I  L     LY   N L+  P    +  NL+SL+LS N+I  +P+ I 
Sbjct: 55  LPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIE 114

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L +L   NN LT  +LP+++  L+NL+  +LS N+L   P +I  +  L+ L L  
Sbjct: 115 KLQKLQSLGLDNNQLT--TLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLST 172

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P+EI  L  L  L L  N LT +P+  G L  L+ L L +N+L +L   I  L+
Sbjct: 173 NRLTTLPQEIGHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQ 232

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            LKSL L +N+L   P EI  LK     L+ L L +N+L TLP  I  LK L  L L  N
Sbjct: 233 NLKSLDLRSNQLTIFPKEIGQLK----NLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSN 288

Query: 279 PLVIRFVSDMTYKPPSLLELASRTLKV 305
            L          K   LL+L+   LK 
Sbjct: 289 QLTTLPQEIKQLKNLQLLDLSYNQLKT 315



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/157 (44%), Positives = 91/157 (57%), Gaps = 4/157 (2%)

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           +KNL+  NL+ NQL   P +I  +  L+ L L  N +  +P+EI KL KL  L L  N L
Sbjct: 1   MKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQL 60

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T +P   G L +L+ L L  NQL +LP  I  LK LKSL L  N+++T+P EI  L    
Sbjct: 61  TTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKL---- 116

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +KL+SL L NN+L TLP EI  L+ L  L L  N L 
Sbjct: 117 QKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLT 153



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/125 (39%), Positives = 69/125 (55%), Gaps = 7/125 (5%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  P    +  NL+ LDLS N++  LP+ I     L TL    N LT
Sbjct: 278 KNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQTLYLGYNQLT 337

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INKL-- 171
              LPK++  L+NLKV  L+ NQL   P +I  +  L+ LYL NN L+   +E I KL  
Sbjct: 338 V--LPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQLSIEEKERIRKLLP 395

Query: 172 -CKLH 175
            C+++
Sbjct: 396 KCQIY 400


>gi|421097204|ref|ZP_15557898.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410799695|gb|EKS01761.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 671

 Score =  134 bits (338), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 100/249 (40%), Positives = 132/249 (53%), Gaps = 26/249 (10%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L HN L   P++  +  NLR L LS+N++  LP+ I N   L TL   NN 
Sbjct: 66  KLKNLQELDLSHNQLQALPEDIGQLQNLRELYLSDNKLEALPEDIGNLKNLRTLHLYNNQ 125

Query: 113 LTA---------------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
           L                       E+LP+D+ NLKNL++ +LS NQL+  P +I  +  L
Sbjct: 126 LKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSRNQLKTLPEEIGKLQNL 185

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           + LYL +N L  +P +I  L  L +L L  N L  +P   G L  L  L LS NQLE+LP
Sbjct: 186 QELYLSDNKLEALPEDIGNLKNLQILDLSRNKLEALPKEIGKLRNLPKLDLSHNQLETLP 245

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             I  L+ L+ L L  N+L TLP EI  L+ L E    L L+NNKL+ LP EI  LK L 
Sbjct: 246 EEIGQLQNLQILDLRYNQLETLPEEIGQLQNLRE----LHLYNNKLKALPKEIGKLKNLR 301

Query: 272 ELSLRDNPL 280
            L+L  N L
Sbjct: 302 TLNLSTNKL 310



 Score =  134 bits (336), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 107/283 (37%), Positives = 145/283 (51%), Gaps = 43/283 (15%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           +++ LD  Y+ L  ETL  +I  L         +N+  L LY+N L   P    K  NLR
Sbjct: 253 NLQILDLRYNQL--ETLPEEIGQL---------QNLRELHLYNNKLKALPKEIGKLKNLR 301

Query: 83  SLDLSNNRITHLPQAITNF-----------PLSTL--------------IARNNLLTAES 117
           +L+LS N++  LP+ I N            PL TL              ++ N L   E+
Sbjct: 302 TLNLSTNKLEALPEEIGNLKNLRTLNLQYNPLKTLPEEIGKLQNLPELDLSHNKL---EA 358

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LPK++  L+NL   +LS NQL+  P +I  +  L+ L+L NN L  +P EI KL  L +L
Sbjct: 359 LPKEIGQLQNLPKLDLSHNQLQALPKEIGQLQNLRELHLYNNQLETLPEEIGKLQNLQIL 418

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            L  N L  +P   G L  L+ L L  NQLE+LP  I  L+ L+ L L  NKL  LP EI
Sbjct: 419 DLSHNKLEALPKEIGQLQNLQILDLRYNQLEALPKEIGKLQNLQELNLRYNKLEALPKEI 478

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             LK     L+ L L  N+L+TLP EI  LK L +L+L+ N L
Sbjct: 479 GKLK----NLQKLNLQYNQLKTLPKEIGKLKNLQKLNLQYNQL 517



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 95/227 (41%), Positives = 125/227 (55%), Gaps = 7/227 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P  +  L L  N L   P    K  NL+ LDLS+N++  LP+ I     L  L   +N L
Sbjct: 44  PSKVFVLDLSSNKLKTLPKEIGKLKNLQELDLSHNQLQALPEDIGQLQNLRELYLSDNKL 103

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
             E+LP+D+ NLKNL+  +L  NQL+  P +I  +  L+ LYL +N L  +P +I  L  
Sbjct: 104 --EALPEDIGNLKNLRTLHLYNNQLKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKN 161

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N L  +P+  G L  L+ L LSDN+LE+LP  I NLK L+ L L  NKL  L
Sbjct: 162 LQILDLSRNQLKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSRNKLEAL 221

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P EI  L+ L      L L +N+L TLP EI  L+ L  L LR N L
Sbjct: 222 PKEIGKLRNLP----KLDLSHNQLETLPEEIGQLQNLQILDLRYNQL 264



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 110/310 (35%), Positives = 158/310 (50%), Gaps = 42/310 (13%)

Query: 7   SSSSSDSSDSDSFKTVSIKTLDFSYSSLDS--ETLAT------------QIELLPNNDYN 52
           SS+   +   +  K  +++ LD S++ L +  E +              ++E LP +  N
Sbjct: 53  SSNKLKTLPKEIGKLKNLQELDLSHNQLQALPEDIGQLQNLRELYLSDNKLEALPEDIGN 112

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARN 110
            K  N+ TL LY+N L   P+   K  NL+ L LS+N++  LP+ I N   L  L ++RN
Sbjct: 113 LK--NLRTLHLYNNQLKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSRN 170

Query: 111 NLLTA--------------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPT 150
            L T                     E+LP+D+ NLKNL++ +LS N+LE  P +I  +  
Sbjct: 171 QLKTLPEEIGKLQNLQELYLSDNKLEALPEDIGNLKNLQILDLSRNKLEALPKEIGKLRN 230

Query: 151 LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           L  L L +N L  +P EI +L  L +L L  N L  +P+  G L  L  L L +N+L++L
Sbjct: 231 LPKLDLSHNQLETLPEEIGQLQNLQILDLRYNQLETLPEEIGQLQNLRELHLYNNKLKAL 290

Query: 211 PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
           P  I  LK L++L L  NKL  LP EI  LK     L++L L  N L+TLP EI  L+ L
Sbjct: 291 PKEIGKLKNLRTLNLSTNKLEALPEEIGNLK----NLRTLNLQYNPLKTLPEEIGKLQNL 346

Query: 271 SELSLRDNPL 280
            EL L  N L
Sbjct: 347 PELDLSHNKL 356



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 103/262 (39%), Positives = 137/262 (52%), Gaps = 18/262 (6%)

Query: 20  KTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFT 79
           K  ++  LD S++ L  E L  +I  L         +N+  L L HN L   P    +  
Sbjct: 342 KLQNLPELDLSHNKL--EALPKEIGQL---------QNLPKLDLSHNQLQALPKEIGQLQ 390

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           NLR L L NN++  LP+ I     L  L   +N L  E+LPK++  L+NL++ +L  NQL
Sbjct: 391 NLRELHLYNNQLETLPEEIGKLQNLQILDLSHNKL--EALPKEIGQLQNLQILDLRYNQL 448

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
           E  P +I  +  L+ L L  N L  +P+EI KL  L  L+L  N L  +P   G L  L+
Sbjct: 449 EALPKEIGKLQNLQELNLRYNKLEALPKEIGKLKNLQKLNLQYNQLKTLPKEIGKLKNLQ 508

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L L  NQL++LP  I  LK L+ L L NN+L+TLP EI  L+ L E    L L  NKL 
Sbjct: 509 KLNLQYNQLKTLPKDIGKLKNLRELDLRNNQLKTLPKEIGKLQNLQE----LNLRYNKLE 564

Query: 259 TLPTEIITLKCLSELSLRDNPL 280
           TLP EI  L+ L  L L  N L
Sbjct: 565 TLPKEIGKLRNLKILYLSHNQL 586



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/245 (39%), Positives = 129/245 (52%), Gaps = 22/245 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY+N L   P+   K  NL+ LDLS+N++  LP+ I     L  L  R N L 
Sbjct: 390 QNLRELHLYNNQLETLPEEIGKLQNLQILDLSHNKLEALPKEIGQLQNLQILDLRYNQL- 448

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            E+LPK++  L+NL+  NL  N+LE  P +I  +  L+ L L  N L  +P+EI KL  L
Sbjct: 449 -EALPKEIGKLQNLQELNLRYNKLEALPKEIGKLKNLQKLNLQYNQLKTLPKEIGKLKNL 507

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N L  +P   G L  L  L L +NQL++LP  I  L+ L+ L L  NKL TLP
Sbjct: 508 QKLNLQYNQLKTLPKDIGKLKNLRELDLRNNQLKTLPKEIGKLQNLQELNLRYNKLETLP 567

Query: 235 TEIITLKCLS----------------EKL---KSLLLHNNKLRTLPTEIITLKCLSELSL 275
            EI  L+ L                 EKL   + L L  N+L+ LP EI  L+ L  L L
Sbjct: 568 KEIGKLRNLKILYLSHNQLQALPKEIEKLVNLRKLYLSGNQLQALPKEIGKLQNLQGLDL 627

Query: 276 RDNPL 280
            +NPL
Sbjct: 628 GNNPL 632



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/279 (35%), Positives = 146/279 (52%), Gaps = 22/279 (7%)

Query: 5   YGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLY 64
           Y S +  ++   D     +++ LD S + L  +TL  +I          K +N+  L L 
Sbjct: 143 YLSDNKLEALPEDIGNLKNLQILDLSRNQL--KTLPEEI---------GKLQNLQELYLS 191

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT---NFPLSTLIARNNLLTAESLPKD 121
            N L   P++     NL+ LDLS N++  LP+ I    N P   L + N L   E+LP++
Sbjct: 192 DNKLEALPEDIGNLKNLQILDLSRNKLEALPKEIGKLRNLPKLDL-SHNQL---ETLPEE 247

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L+NL++ +L  NQLE  P +I  +  L+ L+L NN L  +P+EI KL  L  L+L  
Sbjct: 248 IGQLQNLQILDLRYNQLETLPEEIGQLQNLRELHLYNNKLKALPKEIGKLKNLRTLNLST 307

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P+  G+L  L  L L  N L++LP  I  L+ L  L L +NKL  LP EI  L+
Sbjct: 308 NKLEALPEEIGNLKNLRTLNLQYNPLKTLPEEIGKLQNLPELDLSHNKLEALPKEIGQLQ 367

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            L      L L +N+L+ LP EI  L+ L EL L +N L
Sbjct: 368 NLP----KLDLSHNQLQALPKEIGQLQNLRELHLYNNQL 402



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 97/257 (37%), Positives = 134/257 (52%), Gaps = 18/257 (7%)

Query: 20  KTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFT 79
           K  +++ LD S++ L  E L  +I  L         +N+  L L +N L   P    K  
Sbjct: 411 KLQNLQILDLSHNKL--EALPKEIGQL---------QNLQILDLRYNQLEALPKEIGKLQ 459

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           NL+ L+L  N++  LP+ I     L  L  + N L  ++LPK++  LKNL+  NL  NQL
Sbjct: 460 NLQELNLRYNKLEALPKEIGKLKNLQKLNLQYNQL--KTLPKEIGKLKNLQKLNLQYNQL 517

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
           +  P  I  +  L+ L L NN L  +P+EI KL  L  L+L  N L  +P   G L  L+
Sbjct: 518 KTLPKDIGKLKNLRELDLRNNQLKTLPKEIGKLQNLQELNLRYNKLETLPKEIGKLRNLK 577

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L LS NQL++LP  I  L  L+ L L  N+L+ LP EI  L    + L+ L L NN L+
Sbjct: 578 ILYLSHNQLQALPKEIEKLVNLRKLYLSGNQLQALPKEIGKL----QNLQGLDLGNNPLK 633

Query: 259 TLPTEIITLKCLSELSL 275
           TLP +I  LK L  L L
Sbjct: 634 TLPKDIGKLKSLQTLCL 650



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 88/233 (37%), Positives = 122/233 (52%), Gaps = 19/233 (8%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNND-----YNK---------KPENIDTLLLYHNNL 68
           +++ LD  Y+ L  E L  +I  L N       YNK         K +N+  L L +N L
Sbjct: 437 NLQILDLRYNQL--EALPKEIGKLQNLQELNLRYNKLEALPKEIGKLKNLQKLNLQYNQL 494

Query: 69  SFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKN 127
              P    K  NL+ L+L  N++  LP+ I     L  L  RNN L  ++LPK++  L+N
Sbjct: 495 KTLPKEIGKLKNLQKLNLQYNQLKTLPKDIGKLKNLRELDLRNNQL--KTLPKEIGKLQN 552

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           L+  NL  N+LE  P +I  +  LK LYL +N L  +P+EI KL  L  L L GN L  +
Sbjct: 553 LQELNLRYNKLETLPKEIGKLRNLKILYLSHNQLQALPKEIEKLVNLRKLYLSGNQLQAL 612

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           P   G L  L+ L L +N L++LP  I  LK L++L L N +L +LP EI  L
Sbjct: 613 PKEIGKLQNLQGLDLGNNPLKTLPKDIGKLKSLQTLCLDNKQLESLPIEIGKL 665



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/199 (38%), Positives = 105/199 (52%), Gaps = 14/199 (7%)

Query: 20  KTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFT 79
           K  +++ L+  Y+ L  +TL  +I          K +N+  L L +N L   P +  K  
Sbjct: 480 KLKNLQKLNLQYNQL--KTLPKEI---------GKLKNLQKLNLQYNQLKTLPKDIGKLK 528

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           NLR LDL NN++  LP+ I     L  L  R N L  E+LPK++  L+NLK+  LS NQL
Sbjct: 529 NLRELDLRNNQLKTLPKEIGKLQNLQELNLRYNKL--ETLPKEIGKLRNLKILYLSHNQL 586

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
           +  P +I  +  L+ LYL  N L  +P+EI KL  L  L LG N L  +P   G L  L+
Sbjct: 587 QALPKEIEKLVNLRKLYLSGNQLQALPKEIGKLQNLQGLDLGNNPLKTLPKDIGKLKSLQ 646

Query: 199 ALILSDNQLESLPASISNL 217
            L L + QLESLP  I  L
Sbjct: 647 TLCLDNKQLESLPIEIGKL 665



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 94/168 (55%), Gaps = 4/168 (2%)

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           +T   L K ++N   + V +LS N+L+  P +I  +  L+ L L +N L  +P +I +L 
Sbjct: 32  VTYTDLRKALANPSKVFVLDLSSNKLKTLPKEIGKLKNLQELDLSHNQLQALPEDIGQLQ 91

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N L  +P+  G+L  L  L L +NQL++LP  I  L+ L+ L L +NKL  
Sbjct: 92  NLRELYLSDNKLEALPEDIGNLKNLRTLHLYNNQLKTLPEEIGKLQNLQELYLSDNKLEA 151

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           LP +I  LK     L+ L L  N+L+TLP EI  L+ L EL L DN L
Sbjct: 152 LPEDIGNLK----NLQILDLSRNQLKTLPEEIGKLQNLQELYLSDNKL 195


>gi|421110782|ref|ZP_15571273.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803879|gb|EKS10006.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 473

 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 98/225 (43%), Positives = 128/225 (56%), Gaps = 7/225 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  P+      NL++LDL  N++  LP+ I N   L TL    N L 
Sbjct: 234 QNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLAALPEEIGNLQNLQTLDLEGNQLA 293

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+++ NL+NL+  +L GNQL   P +I  +  LK LYL NN L  +P+EI KL KL
Sbjct: 294 --TLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPKEIGKLQKL 351

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             LSL  N L  +P    DL  L+ L L  NQL +LP  +  L+ L  L LH N+L TLP
Sbjct: 352 QWLSLDHNQLKTLPKEIEDLQNLKILSLGSNQLTTLPKEVGKLQNLIMLDLHGNQLTTLP 411

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
            EI  L    + LK L LH N+L TLP EI  L+ L EL+L  NP
Sbjct: 412 KEIGKL----QNLKMLDLHGNQLMTLPKEIGKLQNLKELNLVGNP 452



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/216 (41%), Positives = 123/216 (56%), Gaps = 7/216 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSN 124
           N L+  P       NL++L+L++N+ T LP+ I N   L  L   +N LT  +LPK++  
Sbjct: 152 NQLTTLPKEIGNLQNLQTLNLNSNQFTTLPEEIGNLQKLQKLDLSHNQLT--TLPKEIGQ 209

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+NL+  NL+ NQL     +I ++  L+ L LG N L  +P EI  L  L  L L GN L
Sbjct: 210 LQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQL 269

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
             +P+  G+L  L+ L L  NQL +LP  I NL+ L++L L  N+L TLP EI       
Sbjct: 270 AALPEEIGNLQNLQTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEI----GKL 325

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +KLK L L+NN+L TLP EI  L+ L  LSL  N L
Sbjct: 326 QKLKKLYLYNNRLTTLPKEIGKLQKLQWLSLDHNQL 361



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/259 (38%), Positives = 140/259 (54%), Gaps = 18/259 (6%)

Query: 24  IKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRS 83
           ++ LD S++ L   TL  +I  L         +N+  L L  N L+          NL++
Sbjct: 190 LQKLDLSHNQLT--TLPKEIGQL---------QNLQKLNLNSNQLTTLSKEIGNLQNLQT 238

Query: 84  LDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
           LDL  N++T LP+ I N   L TL    N L A  LP+++ NL+NL+  +L GNQL   P
Sbjct: 239 LDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLAA--LPEEIGNLQNLQTLDLEGNQLATLP 296

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
            +I ++  L+ L L  N L  +P+EI KL KL  L L  N LT +P   G L +L+ L L
Sbjct: 297 EEIGNLQNLQTLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLPKEIGKLQKLQWLSL 356

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
             NQL++LP  I +L+ LK L L +N+L TLP E+  L    + L  L LH N+L TLP 
Sbjct: 357 DHNQLKTLPKEIEDLQNLKILSLGSNQLTTLPKEVGKL----QNLIMLDLHGNQLTTLPK 412

Query: 263 EIITLKCLSELSLRDNPLV 281
           EI  L+ L  L L  N L+
Sbjct: 413 EIGKLQNLKMLDLHGNQLM 431



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/227 (40%), Positives = 127/227 (55%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N  +  P+       L+ LDLS+N++T LP+ I     L  L   +N LT
Sbjct: 165 QNLQTLNLNSNQFTTLPEEIGNLQKLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQLT 224

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +L K++ NL+NL+  +L  NQL   P +I ++  L+ L L  N L  +P EI  L  L
Sbjct: 225 --TLSKEIGNLQNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLAALPEEIGNLQNL 282

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L GN L  +P+  G+L  L+ L L  NQL +LP  I  L+ LK L L+NN+L TLP
Sbjct: 283 QTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLTTLP 342

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L    +KL+ L L +N+L+TLP EI  L+ L  LSL  N L 
Sbjct: 343 KEIGKL----QKLQWLSLDHNQLKTLPKEIEDLQNLKILSLGSNQLT 385



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 79/148 (53%), Gaps = 4/148 (2%)

Query: 134 SGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGD 193
            GNQL   P +I ++  L+ L L +N    +P EI  L KL  L L  N LT +P   G 
Sbjct: 150 GGNQLTTLPKEIGNLQNLQTLNLNSNQFTTLPEEIGNLQKLQKLDLSHNQLTTLPKEIGQ 209

Query: 194 LYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLH 253
           L  L+ L L+ NQL +L   I NL+ L++L L  N+L TLP EI  L    + L++L L 
Sbjct: 210 LQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIGNL----QNLQTLDLE 265

Query: 254 NNKLRTLPTEIITLKCLSELSLRDNPLV 281
            N+L  LP EI  L+ L  L L  N L 
Sbjct: 266 GNQLAALPEEIGNLQNLQTLDLEGNQLA 293



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/120 (37%), Positives = 62/120 (51%), Gaps = 4/120 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K + +  L L HN L   P       NL+ L L +N++T LP+ +     L  L    N 
Sbjct: 347 KLQKLQWLSLDHNQLKTLPKEIEDLQNLKILSLGSNQLTTLPKEVGKLQNLIMLDLHGNQ 406

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL-GNNSLNHVPREINKL 171
           LT  +LPK++  L+NLK+ +L GNQL   P +I  +  LK L L GN SL     +I KL
Sbjct: 407 LT--TLPKEIGKLQNLKMLDLHGNQLMTLPKEIGKLQNLKELNLVGNPSLRSQKEKIQKL 464


>gi|255078866|ref|XP_002503013.1| predicted protein [Micromonas sp. RCC299]
 gi|226518279|gb|ACO64271.1| predicted protein [Micromonas sp. RCC299]
          Length = 423

 Score =  134 bits (337), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 91/225 (40%), Positives = 119/225 (52%), Gaps = 7/225 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           ++ L L+ N L+  P    + T+L  L L NNR+T LP  I     L  L    N LT  
Sbjct: 133 LEALWLHGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAEIGQLTSLEALYLHGNQLT-- 190

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           S+P ++  L +L+   L  NQL   P +I  + +LK L+L  N L  +P EI +L  L  
Sbjct: 191 SVPAEIGQLTSLEKLELYDNQLTSVPAEIGQLTSLKALWLFGNQLTSLPAEIGQLTSLTG 250

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N LT +P   G L  LEAL L DNQL S+PA I  L  LK L LH N+L ++P E
Sbjct: 251 LRLYNNRLTSLPAEIGQLTSLEALWLHDNQLTSVPAEIGQLTSLKELWLHGNRLTSVPAE 310

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I  L  L     +L L+NN+L +LP EI  L  L  L L  N L+
Sbjct: 311 IGQLTSLG----ALSLYNNRLTSLPEEIGQLTSLDRLYLGRNQLM 351



 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/243 (39%), Positives = 125/243 (51%), Gaps = 13/243 (5%)

Query: 45  LLPNNDYNKKPENID------TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI 98
           LL  N     P  I        L L+ N L+  P    + T L +L L  N++T LP  I
Sbjct: 91  LLHGNQLTSVPAEIGLLTSLRELYLHDNQLTGVPAEIVQLTTLEALWLHGNQLTSLPAEI 150

Query: 99  TNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
                L+ L   NN LT  SLP ++  L +L+   L GNQL   P +I  + +L+ L L 
Sbjct: 151 GQLTSLTGLRLYNNRLT--SLPAEIGQLTSLEALYLHGNQLTSVPAEIGQLTSLEKLELY 208

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           +N L  VP EI +L  L  L L GN LT +P   G L  L  L L +N+L SLPA I  L
Sbjct: 209 DNQLTSVPAEIGQLTSLKALWLFGNQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAEIGQL 268

Query: 218 KMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRD 277
             L++L LH+N+L ++P EI  L      LK L LH N+L ++P EI  L  L  LSL +
Sbjct: 269 TSLEALWLHDNQLTSVPAEIGQLTS----LKELWLHGNRLTSVPAEIGQLTSLGALSLYN 324

Query: 278 NPL 280
           N L
Sbjct: 325 NRL 327



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/219 (40%), Positives = 116/219 (52%), Gaps = 7/219 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L  N+L+  P    + T L+ L L NN++T LP  I     L  L   NN LT    P +
Sbjct: 23  LGRNHLTSVPAEIVQLTTLQELKLYNNQLTSLPAEIGQLTSLRELYLCNNKLTIA--PAE 80

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L  L    L GNQL   P +I  + +L+ LYL +N L  VP EI +L  L  L L G
Sbjct: 81  IGQLTALTELLLHGNQLTSVPAEIGLLTSLRELYLHDNQLTGVPAEIVQLTTLEALWLHG 140

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N LT +P   G L  L  L L +N+L SLPA I  L  L++L LH N+L ++P EI  L 
Sbjct: 141 NQLTSLPAEIGQLTSLTGLRLYNNRLTSLPAEIGQLTSLEALYLHGNQLTSVPAEIGQLT 200

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            L EKL+   L++N+L ++P EI  L  L  L L  N L
Sbjct: 201 SL-EKLE---LYDNQLTSVPAEIGQLTSLKALWLFGNQL 235



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/214 (37%), Positives = 113/214 (52%), Gaps = 7/214 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           +++ L LY N L+  P    + T+L++L L  N++T LP  I     L+ L   NN LT 
Sbjct: 201 SLEKLELYDNQLTSVPAEIGQLTSLKALWLFGNQLTSLPAEIGQLTSLTGLRLYNNRLT- 259

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLP ++  L +L+   L  NQL   P +I  + +LK L+L  N L  VP EI +L  L 
Sbjct: 260 -SLPAEIGQLTSLEALWLHDNQLTSVPAEIGQLTSLKELWLHGNRLTSVPAEIGQLTSLG 318

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            LSL  N LT +P+  G L  L+ L L  NQL S+P  I  L  L  L L +N+L ++P 
Sbjct: 319 ALSLYNNRLTSLPEEIGQLTSLDRLYLGRNQLMSVPEEIGQLSSLLWLYLGSNQLTSIPA 378

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           EI  L  LS     L L  N+L ++P  I  L+ 
Sbjct: 379 EIAQLTSLS----VLDLSGNQLTSVPAAIRELRA 408



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/215 (36%), Positives = 105/215 (48%), Gaps = 28/215 (13%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNL 125
           N L+  P    + T+L  L+L  N +T +P  I                       ++ L
Sbjct: 3   NQLTSLPAEIGQLTSLTKLNLGRNHLTSVPAEIV---------------------QLTTL 41

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           + LK++N   NQL   P +I  + +L+ LYL NN L   P EI +L  L  L L GN LT
Sbjct: 42  QELKLYN---NQLTSLPAEIGQLTSLRELYLCNNKLTIAPAEIGQLTALTELLLHGNQLT 98

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
            +P   G L  L  L L DNQL  +PA I  L  L++L LH N+L +LP EI  L  L+ 
Sbjct: 99  SVPAEIGLLTSLRELYLHDNQLTGVPAEIVQLTTLEALWLHGNQLTSLPAEIGQLTSLT- 157

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
               L L+NN+L +LP EI  L  L  L L  N L
Sbjct: 158 ---GLRLYNNRLTSLPAEIGQLTSLEALYLHGNQL 189



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 62/146 (42%), Positives = 76/146 (52%), Gaps = 4/146 (2%)

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
           GNQL   P +I  + +L  L LG N L  VP EI +L  L  L L  N LT +P   G L
Sbjct: 2   GNQLTSLPAEIGQLTSLTKLNLGRNHLTSVPAEIVQLTTLQELKLYNNQLTSLPAEIGQL 61

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
             L  L L +N+L   PA I  L  L  LLLH N+L ++P EI  L  L E    L LH+
Sbjct: 62  TSLRELYLCNNKLTIAPAEIGQLTALTELLLHGNQLTSVPAEIGLLTSLRE----LYLHD 117

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPL 280
           N+L  +P EI+ L  L  L L  N L
Sbjct: 118 NQLTGVPAEIVQLTTLEALWLHGNQL 143



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/79 (46%), Positives = 44/79 (55%), Gaps = 4/79 (5%)

Query: 204 DNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTE 263
            NQL SLPA I  L  L  L L  N L ++P EI+ L  L E    L L+NN+L +LP E
Sbjct: 2   GNQLTSLPAEIGQLTSLTKLNLGRNHLTSVPAEIVQLTTLQE----LKLYNNQLTSLPAE 57

Query: 264 IITLKCLSELSLRDNPLVI 282
           I  L  L EL L +N L I
Sbjct: 58  IGQLTSLRELYLCNNKLTI 76


>gi|421137163|ref|ZP_15597251.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410018657|gb|EKO85494.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
          Length = 313

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 103/285 (36%), Positives = 145/285 (50%), Gaps = 30/285 (10%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N L+  P    +  NLR L+L+ N+ T LP+ I     L  L    N  T
Sbjct: 17  QNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFT 76

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLPK++  L+NL+V NL+GNQL   P +I  +  L+ L L  N    +P+EI +L  L
Sbjct: 77  --SLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQLQNL 134

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK----- 229
            VL+L GN LT +P   G L  LE L L+ NQ  SLP  I  L+ L++L L +N+     
Sbjct: 135 RVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFP 194

Query: 230 ------------------LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
                             L+TLP EI+ L    + L+SL L +N+L +LP EI  L+ L 
Sbjct: 195 KEIRQQQSLKWLRLSGDQLKTLPKEILLL----QNLQSLHLDSNQLTSLPKEIGQLQNLF 250

Query: 272 ELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLP 316
           EL+L+DN L          +   +L L S +  + E    QE LP
Sbjct: 251 ELNLQDNKLKTLPKEIGQLQKLEVLRLYSNSFSLKEKQKIQELLP 295



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/193 (40%), Positives = 103/193 (53%), Gaps = 7/193 (3%)

Query: 91  ITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIP 149
           +  LP+ I  F  L  L    N LT  SLPK++  L+NL+V NL+GNQ    P +I  + 
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLT--SLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQ 63

Query: 150 TLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            L+ L L  N    +P+EI +L  L VL+L GN LT +P   G L  LE L L  NQ  S
Sbjct: 64  NLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLDGNQFTS 123

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           LP  I  L+ L+ L L  N+L +LP EI  L    + L+ L L  N+  +LP EI  L+ 
Sbjct: 124 LPKEIGQLQNLRVLNLAGNQLTSLPKEIGQL----QNLERLDLAGNQFTSLPKEIGQLQK 179

Query: 270 LSELSLRDNPLVI 282
           L  L+L  N   I
Sbjct: 180 LEALNLDHNRFTI 192



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 63/123 (51%), Gaps = 4/123 (3%)

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           +G + L  +PR I     L  L+L GN LT +P   G L  L  L L+ NQ  SLP  I 
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            L+ L+ L L  N+  +LP EI  L    + L+ L L  N+L +LP EI  L+ L  L L
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEIGQL----QNLRVLNLAGNQLTSLPKEIGQLQNLERLDL 116

Query: 276 RDN 278
             N
Sbjct: 117 DGN 119


>gi|418688837|ref|ZP_13249972.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400361995|gb|EJP17948.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 377

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 97/228 (42%), Positives = 129/228 (56%), Gaps = 7/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +  NL+ LDL +N++T LPQ I     L  L  R+N LT
Sbjct: 92  KNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLT 151

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +L KD+  L+NLK  +LS NQL   P +I  +  LK LYL  N     P+EI +L  L
Sbjct: 152 --TLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNL 209

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N +T +P+    L +L+ L LSDNQL +LP  I  LK L++L L  N+L  LP
Sbjct: 210 KVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILP 269

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            E+  L    E L++L L NN+L+TLP EI  LK L  L L +N L I
Sbjct: 270 KEVGQL----ENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTI 313



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/224 (41%), Positives = 124/224 (55%), Gaps = 7/224 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+    +  +  NL+SLDLSNN++T LP  I     L +L    N   
Sbjct: 138 KNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFA 197

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+NLKV  L+ NQ+   P +I  +  L+YLYL +N L  +P+EI +L  L
Sbjct: 198 --TFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNL 255

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L+ L L +NQL++LP  I  LK L++L L NN+L  LP
Sbjct: 256 QTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILP 315

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK L      L L  N+L TLP EI  LK L  L L +N
Sbjct: 316 QEIGKLKNLL----WLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 355



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/229 (40%), Positives = 123/229 (53%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P  +  L L    L   P    K  NL+ L L  N++T LPQ I     L  L  R+N L
Sbjct: 45  PLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 104

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +LPK++  LKNL+V +L  NQL   P +I  +  L+ LYL +N L  + ++I +L  
Sbjct: 105 T--TLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQN 162

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P+    L  L++L LS+NQ  + P  I  L+ LK L L+NN++  L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK    KL+ L L +N+L TLP EI  LK L  L L  N L I
Sbjct: 223 PNEIAKLK----KLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTI 267



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 82/226 (36%), Positives = 117/226 (51%), Gaps = 14/226 (6%)

Query: 5   YGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLY 64
           Y  S+   +   D  +  ++K+LD S + L   TL  +IE L         +N+ +L L 
Sbjct: 144 YLRSNRLTTLSKDIEQLQNLKSLDLSNNQLT--TLPNEIEQL---------KNLKSLYLS 192

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
            N  + FP    +  NL+ L L+NN+IT LP  I     L  L   +N L   +LPK++ 
Sbjct: 193 ENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLI--TLPKEIE 250

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            LKNL+  +LS NQL   P ++  +  L+ L L NN L  +P+EI +L  L  L L  N 
Sbjct: 251 QLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQ 310

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           LT +P   G L  L  L L  NQL +LP  I  LK L++L L+NN+
Sbjct: 311 LTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQ 356



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 90/165 (54%), Gaps = 4/165 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N   ++V +LS  +L+  PI+I  +  L+ LYL  N L  +P+EI +L  
Sbjct: 34  TYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P     L  L+ L L  NQL  LP  I  LK L+ L L +N+L TL
Sbjct: 94  LQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTL 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             +I  L    + LKSL L NN+L TLP EI  LK L  L L +N
Sbjct: 154 SKDIEQL----QNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194



 Score = 53.1 bits (126), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 54/102 (52%), Gaps = 11/102 (10%)

Query: 188 PDTFGDL-------YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           P T+ DL        ++  L LS  +L++LP  I  LK L+ L LH N+L  LP EI  L
Sbjct: 32  PGTYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQL 91

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           K     L+ L L +N+L TLP EI  LK L  L L  N L +
Sbjct: 92  K----NLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTV 129


>gi|421099992|ref|ZP_15560634.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796973|gb|EKR99090.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 474

 Score =  134 bits (337), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 103/242 (42%), Positives = 126/242 (52%), Gaps = 30/242 (12%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI----------------TNFP---- 102
           L HN L+  P +  K  NL+ LDLS N++T LP+ I                T  P    
Sbjct: 239 LSHNKLTALPKDIGKLQNLQVLDLSGNQLTTLPKDIGYLKELQVLHLEDNQFTTLPKEIG 298

Query: 103 ----LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L  L   NN LT   LPK++  L+NL+V  L  NQL   P +I  +  L+ LYL N
Sbjct: 299 QLQNLRVLYLYNNQLTI--LPKEIGKLQNLQVLYLHSNQLTTLPKEIGHLKGLQELYLSN 356

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P+EI +L  L VL L  N LT +P   G L  L  L LS NQL SLP  I  L+
Sbjct: 357 NQLTTLPKEIGELQNLQVLYLHSNQLTTLPKEIGQLQNLPVLYLSYNQLTSLPKDIGKLQ 416

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+ L L NN+L TLP EI  L+ L E    L L NNKL+TLP EI  L+ L  L L D 
Sbjct: 417 NLQKLDLSNNQLTTLPNEIGKLQNLQE----LYLSNNKLKTLPDEIGKLQKLRTLDLDDI 472

Query: 279 PL 280
           PL
Sbjct: 473 PL 474



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/229 (41%), Positives = 130/229 (56%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K + +  L LY+N L   P +  +  NL+ L+L+NN++  LP+ I     L  L   NN 
Sbjct: 138 KLKELQGLELYNNQLKTLPKDIERLQNLQVLNLTNNQLKTLPKDIGKLQNLQVLRLGNNK 197

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT   L K++  L+NL+V +L+ NQL   P  I  +  L+ L L +N L  +P++I KL 
Sbjct: 198 LTI--LSKEIGKLQNLQVLDLTNNQLTTLPKDIGHLKELQDLDLSHNKLTALPKDIGKLQ 255

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L VL L GN LT +P   G L +L+ L L DNQ  +LP  I  L+ L+ L L+NN+L  
Sbjct: 256 NLQVLDLSGNQLTTLPKDIGYLKELQVLHLEDNQFTTLPKEIGQLQNLRVLYLYNNQLTI 315

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP EI  L    + L+ L LH+N+L TLP EI  LK L EL L +N L 
Sbjct: 316 LPKEIGKL----QNLQVLYLHSNQLTTLPKEIGHLKGLQELYLSNNQLT 360



 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 99/247 (40%), Positives = 132/247 (53%), Gaps = 22/247 (8%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L +N L+  P +      L+ LDLS+N++T LP+ I     L  L    N 
Sbjct: 207 KLQNLQVLDLTNNQLTTLPKDIGHLKELQDLDLSHNKLTALPKDIGKLQNLQVLDLSGNQ 266

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LPKD+  LK L+V +L  NQ    P +I  +  L+ LYL NN L  +P+EI KL 
Sbjct: 267 LT--TLPKDIGYLKELQVLHLEDNQFTTLPKEIGQLQNLRVLYLYNNQLTILPKEIGKLQ 324

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L VL L  N LT +P   G L  L+ L LS+NQL +LP  I  L+ L+ L LH+N+L T
Sbjct: 325 NLQVLYLHSNQLTTLPKEIGHLKGLQELYLSNNQLTTLPKEIGELQNLQVLYLHSNQLTT 384

Query: 233 LPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           LP EI  L+ L                    + L+ L L NN+L TLP EI  L+ L EL
Sbjct: 385 LPKEIGQLQNLPVLYLSYNQLTSLPKDIGKLQNLQKLDLSNNQLTTLPNEIGKLQNLQEL 444

Query: 274 SLRDNPL 280
            L +N L
Sbjct: 445 YLSNNKL 451



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 93/251 (37%), Positives = 128/251 (50%), Gaps = 26/251 (10%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF--PLSTLIARNN 111
           K + +  L L  N ++  P        L+ LDLSNN++  LP+ I     PL   +  NN
Sbjct: 69  KLQKLQKLDLRGNRIATLPKEIGYLKELQKLDLSNNQLKTLPKDIEQLQKPLVLHLNYNN 128

Query: 112 LLTA--------------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
             T                     ++LPKD+  L+NL+V NL+ NQL+  P  I  +  L
Sbjct: 129 FTTLPKEIGKLKELQGLELYNNQLKTLPKDIERLQNLQVLNLTNNQLKTLPKDIGKLQNL 188

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           + L LGNN L  + +EI KL  L VL L  N LT +P   G L +L+ L LS N+L +LP
Sbjct: 189 QVLRLGNNKLTILSKEIGKLQNLQVLDLTNNQLTTLPKDIGHLKELQDLDLSHNKLTALP 248

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             I  L+ L+ L L  N+L TLP +I  LK    +L+ L L +N+  TLP EI  L+ L 
Sbjct: 249 KDIGKLQNLQVLDLSGNQLTTLPKDIGYLK----ELQVLHLEDNQFTTLPKEIGQLQNLR 304

Query: 272 ELSLRDNPLVI 282
            L L +N L I
Sbjct: 305 VLYLYNNQLTI 315



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 78/187 (41%), Positives = 106/187 (56%), Gaps = 3/187 (1%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           +  L L  N  +  P    +  NLR L L NN++T LP+ I     L  L   +N LT  
Sbjct: 280 LQVLHLEDNQFTTLPKEIGQLQNLRVLYLYNNQLTILPKEIGKLQNLQVLYLHSNQLT-- 337

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++ +LK L+   LS NQL   P +I ++  L+ LYL +N L  +P+EI +L  L V
Sbjct: 338 TLPKEIGHLKGLQELYLSNNQLTTLPKEIGELQNLQVLYLHSNQLTTLPKEIGQLQNLPV 397

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N LT +P   G L  L+ L LS+NQL +LP  I  L+ L+ L L NNKL+TLP E
Sbjct: 398 LYLSYNQLTSLPKDIGKLQNLQKLDLSNNQLTTLPNEIGKLQNLQELYLSNNKLKTLPDE 457

Query: 237 IITLKCL 243
           I  L+ L
Sbjct: 458 IGKLQKL 464



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 60/152 (39%), Positives = 78/152 (51%), Gaps = 3/152 (1%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L+ N L+  P        L+ L LSNN++T LP+ I     L  L   +N 
Sbjct: 322 KLQNLQVLYLHSNQLTTLPKEIGHLKGLQELYLSNNQLTTLPKEIGELQNLQVLYLHSNQ 381

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LPK++  L+NL V  LS NQL   P  I  +  L+ L L NN L  +P EI KL 
Sbjct: 382 LT--TLPKEIGQLQNLPVLYLSYNQLTSLPKDIGKLQNLQKLDLSNNQLTTLPNEIGKLQ 439

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSD 204
            L  L L  N L  +PD  G L +L  L L D
Sbjct: 440 NLQELYLSNNKLKTLPDEIGKLQKLRTLDLDD 471



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 120/240 (50%), Gaps = 11/240 (4%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +L + + N  ++ + +L GNQL   P  I  +  L+ L L  N +  +P+EI  L +
Sbjct: 36  TYHNLTEALQNPTDVLILDLIGNQLTTLPKDIGKLQKLQKLDLRGNRIATLPKEIGYLKE 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L  +P     L +   L L+ N   +LP  I  LK L+ L L+NN+L+TL
Sbjct: 96  LQKLDLSNNQLKTLPKDIEQLQKPLVLHLNYNNFTTLPKEIGKLKELQGLELYNNQLKTL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPP 293
           P +I  L    + L+ L L NN+L+TLP +I  L+ L  L L +N L I        +  
Sbjct: 156 PKDIERL----QNLQVLNLTNNQLKTLPKDIGKLQNLQVLRLGNNKLTILSKEIGKLQNL 211

Query: 294 SLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCG 353
            +L+L +  L     D    HL +  +Q L+ +H+ +    K +    ++++++ +D  G
Sbjct: 212 QVLDLTNNQLTTLPKDIG--HLKE--LQDLDLSHNKLTALPKDI---GKLQNLQVLDLSG 264


>gi|418705776|ref|ZP_13266635.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410764608|gb|EKR35316.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 332

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 111/274 (40%), Positives = 145/274 (52%), Gaps = 23/274 (8%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPN--------NDYNKKPENIDTL----LLY--HNN 67
           + ++ LD S   L  +TL  +I  L N        N     P+ I+ L    LLY   N 
Sbjct: 47  LEVRVLDLSRQKL--KTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR 104

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           L+       +  NL+ LDL +N++T LPQ I     L  L  R+N LT  +L KD+  L+
Sbjct: 105 LTTLSKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLT--TLSKDIEQLQ 162

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NLK  +LS NQL   P +I  +  LK LYL  N     P+EI +L  L VL L  N LT 
Sbjct: 163 NLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQLTI 222

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P+    L +L+ L LSDNQL +LP  I  LK LKSL L  N+L  LP E+  L    E 
Sbjct: 223 LPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEVGQL----EN 278

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L++L L NN+L+TLP EI  LK L  L L +N L
Sbjct: 279 LQTLDLRNNQLKTLPNEIEQLKNLQTLYLNNNQL 312



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/229 (39%), Positives = 122/229 (53%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P  +  L L    L   P    +  NL+ L L  N++T LPQ I     L  L  R+N L
Sbjct: 46  PLEVRVLDLSRQKLKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 105

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +L K++  LKNL+V +L  NQL   P +I  +  L+ LYL +N L  + ++I +L  
Sbjct: 106 T--TLSKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQN 163

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P+    L  L++L LS+NQ  + P  I  L+ LK L L+NN+L  L
Sbjct: 164 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQLTIL 223

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK    KL+ L L +N+L TLP EI  LK L  L L  N L I
Sbjct: 224 PNEIAKLK----KLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTI 268



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 89/165 (53%), Gaps = 4/165 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N   ++V +LS  +L+  PI+I  +  L+ LYL  N L  +P+EI +L  
Sbjct: 35  TYRDLTKALQNPLEVRVLDLSRQKLKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKN 94

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +      L  L+ L L  NQL  LP  I  LK L+ L L +N+L TL
Sbjct: 95  LQLLYLRSNRLTTLSKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTL 154

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             +I  L    + LKSL L NN+L TLP EI  LK L  L L +N
Sbjct: 155 SKDIEQL----QNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 195



 Score = 38.5 bits (88), Expect = 5.5,   Method: Compositional matrix adjust.
 Identities = 36/87 (41%), Positives = 42/87 (48%), Gaps = 6/87 (6%)

Query: 225 LHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRF 284
           L   KL+TLP EI  LK     L+ L LH N+L  LP EI  LK L  L LR N L    
Sbjct: 54  LSRQKLKTLPIEIGQLK----NLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLS 109

Query: 285 VSDMTYKPPSLLELASRTLKV--HEID 309
                 K   +L+L S  L V   EI+
Sbjct: 110 KEIEQLKNLQVLDLGSNQLTVLPQEIE 136


>gi|359683883|ref|ZP_09253884.1| lipoprotein, partial [Leptospira santarosai str. 2000030832]
          Length = 332

 Score =  133 bits (335), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 95/227 (41%), Positives = 125/227 (55%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           EN+  L +++N L   P       NL+SL+L NNR+  LP+ I     L  L   NN L 
Sbjct: 20  ENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKEIGTLQKLEWLYLTNNQLA 79

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+ L+   L+ NQL   P +I  +  LK L L NN L   P+EI  L  L
Sbjct: 80  --TLPKEIGKLQRLEWLGLTNNQLRILPQEIGKLQNLKELILENNRLESFPKEIGTLSNL 137

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N  T +P   G L++L  L L  NQL +LP  I  L+ L+ L L+NN+L TLP
Sbjct: 138 QRLHLEYNRFTTLPKEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLP 197

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI TL    +KL+ L L NN+L TLP EI  L+ L +L L DN LV
Sbjct: 198 KEIGTL----QKLQHLYLANNQLATLPQEIGQLQNLKDLDLSDNQLV 240



 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 90/225 (40%), Positives = 127/225 (56%), Gaps = 7/225 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           + ++ L L +N L+  P    K   L  L L+NN++  LPQ I     L  LI  NN L 
Sbjct: 66  QKLEWLYLTNNQLATLPKEIGKLQRLEWLGLTNNQLRILPQEIGKLQNLKELILENNRL- 124

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            ES PK++  L NL+  +L  N+    P +I  +  L +L L +N L  +P+EI +L +L
Sbjct: 125 -ESFPKEIGTLSNLQRLHLEYNRFTTLPKEIGTLHRLPWLNLEHNQLTTLPQEIGRLERL 183

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N L  +P   G L +L+ L L++NQL +LP  I  L+ LK L L +N+L TLP
Sbjct: 184 EWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLATLPQEIGQLQNLKDLDLSDNQLVTLP 243

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
            EI TL+    +L+ L L NN+LRTLP EI  L+ L +L L  NP
Sbjct: 244 EEIGTLQ----RLEWLSLKNNQLRTLPQEIGQLQNLKDLDLSGNP 284



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/213 (39%), Positives = 109/213 (51%), Gaps = 7/213 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K + ++ L L +N L   P    K  NL+ L L NNR+   P+ I     L  L    N 
Sbjct: 87  KLQRLEWLGLTNNQLRILPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNR 146

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
            T  +LPK++  L  L   NL  NQL   P +I  +  L++L L NN L  +P+EI  L 
Sbjct: 147 FT--TLPKEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQ 204

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  L L  N L  +P   G L  L+ L LSDNQL +LP  I  L+ L+ L L NN+LRT
Sbjct: 205 KLQHLYLANNQLATLPQEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLRT 264

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
           LP EI  L    + LK L L  N   T P EI+
Sbjct: 265 LPQEIGQL----QNLKDLDLSGNPFTTFPQEIV 293



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/240 (35%), Positives = 116/240 (48%), Gaps = 43/240 (17%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPK 120
           L L +N L+  P+   +  NL+ L++ NN++  LPQ I                      
Sbjct: 2   LRLAYNQLTTLPEEIGRLENLQDLNVFNNQLITLPQEI---------------------- 39

Query: 121 DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
               L+NL+  NL  N+L   P +I  +  L++LYL NN L  +P+EI KL +L  L L 
Sbjct: 40  --GTLQNLQSLNLENNRLVTLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLT 97

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
            N L  +P   G L  L+ LIL +N+LES P  I  L  L+ L L  N+  TLP EI TL
Sbjct: 98  NNQLRILPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNRFTTLPKEIGTL 157

Query: 241 KCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             L                    E+L+ L L+NN+L TLP EI TL+ L  L L +N L 
Sbjct: 158 HRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLA 217



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/128 (42%), Positives = 74/128 (57%), Gaps = 4/128 (3%)

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
           YL L  N L  +P EI +L  L  L++  N L  +P   G L  L++L L +N+L +LP 
Sbjct: 1   YLRLAYNQLTTLPEEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLVTLPK 60

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSE 272
            I  L+ L+ L L NN+L TLP EI  L    ++L+ L L NN+LR LP EI  L+ L E
Sbjct: 61  EIGTLQKLEWLYLTNNQLATLPKEIGKL----QRLEWLGLTNNQLRILPQEIGKLQNLKE 116

Query: 273 LSLRDNPL 280
           L L +N L
Sbjct: 117 LILENNRL 124


>gi|456875032|gb|EMF90266.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 664

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/230 (40%), Positives = 132/230 (57%), Gaps = 9/230 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNN 111
           K +N+  L L  N L+  P    K  NL+ L+L+ NR+ +LP+ I     L  L + RN 
Sbjct: 166 KLQNLRDLDLSSNQLTILPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTRNR 225

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
           L    +LP+++  L+NL++ NL  NQL   P +I ++  L+ LYLG+N    +P+ I KL
Sbjct: 226 L---ANLPEEIGKLQNLQILNLGVNQLTTLPKEIGNLQKLQELYLGDNQFATLPKAIGKL 282

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
            KL  L LG N LT +P     L +L+ L L  N+L +LP  I  L+ L+ L L+NN+L 
Sbjct: 283 QKLQELDLGINQLTTLPKEIEKLQKLQQLYLYSNRLANLPEEIEKLQNLQWLGLNNNQLT 342

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           TLP EI  L    +KL++L L NN+L TLP EI  L+ L  L L +N L 
Sbjct: 343 TLPKEIGKL----QKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLT 388



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/286 (36%), Positives = 144/286 (50%), Gaps = 41/286 (14%)

Query: 20  KTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFT 79
           K   ++ LD   + L   TL  +IE         K + +  L LY N L+  P+   K  
Sbjct: 281 KLQKLQELDLGINQLT--TLPKEIE---------KLQKLQQLYLYSNRLANLPEEIEKLQ 329

Query: 80  NLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           NL+ L L+NN++T LP+ I     L  L   NN LT  +LPK++  L+NL+   LS NQL
Sbjct: 330 NLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLT--TLPKEIGKLQNLQWLGLSNNQL 387

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
              P +I  +  L+ L+L NN L  +P+EI KL  L  L L  N LT +P+    L +L+
Sbjct: 388 TTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLK 447

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLH-----------------------NNKLRTLPT 235
            L  S NQ  ++P  I NL+ L++L L+                       +N+L TLP 
Sbjct: 448 KLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPK 507

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           EI  L    + L+ L L +N+L TLP EI  L+ L EL LRDN L 
Sbjct: 508 EIGKL----QNLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDNQLT 549



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/249 (39%), Positives = 137/249 (55%), Gaps = 22/249 (8%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K +++  L L +N L+  P    K  NL+ L L  NR+T LP+ I     L  L +  N 
Sbjct: 396 KLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQ 455

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
            T  ++P+++ NL+NL+  NL  NQL   P +I ++  L+ LYL +N L  +P+EI KL 
Sbjct: 456 FT--TVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQ 513

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L +L L  N LT +P   G L  L+ L L DNQL +LP  I NL+ L+ L L++N+L T
Sbjct: 514 NLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDNQLTTLPKEIGNLQNLQVLNLNHNRLTT 573

Query: 233 LPTEIITLKCLS----------------EKLKSL-LLH--NNKLRTLPTEIITLKCLSEL 273
           LP EI  L+ L                  KL++L LLH  NN+L TLP EI  L+ L EL
Sbjct: 574 LPKEIGNLQNLQVLNLNHNRLTTLPEEIGKLQNLQLLHLDNNQLTTLPEEIGKLQNLKEL 633

Query: 274 SLRDNPLVI 282
            L  NP +I
Sbjct: 634 DLVGNPSLI 642



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 81/214 (37%), Positives = 114/214 (53%), Gaps = 28/214 (13%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKN 127
           L   P    K  NLR LDLS+N++T                         LPK++  L+N
Sbjct: 157 LWTLPKEIGKLQNLRDLDLSSNQLT------------------------ILPKEIGKLQN 192

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           L+  NL+ N+L   P +I  +  L+ L+L  N L ++P EI KL  L +L+LG N LT +
Sbjct: 193 LQKLNLTRNRLANLPEEIGKLQNLQELHLTRNRLANLPEEIGKLQNLQILNLGVNQLTTL 252

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
           P   G+L +L+ L L DNQ  +LP +I  L+ L+ L L  N+L TLP EI  L    +KL
Sbjct: 253 PKEIGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDLGINQLTTLPKEIEKL----QKL 308

Query: 248 KSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           + L L++N+L  LP EI  L+ L  L L +N L 
Sbjct: 309 QQLYLYSNRLANLPEEIEKLQNLQWLGLNNNQLT 342



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 118/227 (51%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           + +  L L  N  +  P    K   L+ LDL  N++T LP+ I     L  L   +N L 
Sbjct: 260 QKLQELYLGDNQFATLPKAIGKLQKLQELDLGINQLTTLPKEIEKLQKLQQLYLYSNRLA 319

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+++  L+NL+   L+ NQL   P +I  +  L+ L+L NN L  +P+EI KL  L
Sbjct: 320 --NLPEEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIGKLQNL 377

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L+ L L +NQL +LP  I  L+ L+ L L  N+L TLP
Sbjct: 378 QWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLP 437

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L    +KLK L    N+  T+P EI  L+ L  L+L  N L 
Sbjct: 438 EEIEKL----QKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLT 480



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/221 (39%), Positives = 118/221 (53%), Gaps = 7/221 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K +N+  L L  N L+  P        L+ L L +N+   LP+AI     L  L    N 
Sbjct: 235 KLQNLQILNLGVNQLTTLPKEIGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDLGINQ 294

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LPK++  L+ L+   L  N+L   P +I  +  L++L L NN L  +P+EI KL 
Sbjct: 295 LT--TLPKEIEKLQKLQQLYLYSNRLANLPEEIEKLQNLQWLGLNNNQLTTLPKEIGKLQ 352

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  L L  N LT +P   G L  L+ L LS+NQL +LP  I  L+ L+ L L NN+L T
Sbjct: 353 KLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTT 412

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           LP EI  L+ L E    L L  N+L TLP EI  L+ L +L
Sbjct: 413 LPKEIGKLQNLQE----LRLDYNRLTTLPEEIEKLQKLKKL 449


>gi|429961438|gb|ELA40983.1| hypothetical protein VICG_02013 [Vittaforma corneae ATCC 50505]
          Length = 875

 Score =  133 bits (334), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/248 (41%), Positives = 129/248 (52%), Gaps = 7/248 (2%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           ++ L L HNNL   P    +  NL+ L LSNN++  L   I     LSTL   +N L  E
Sbjct: 69  LEKLELSHNNLKALPSEIGELKNLQHLVLSNNKLKTLSDVIGELENLSTLHLDDNEL--E 126

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LP  +  L+NL+  +L  NQ E FP  I  +  L+ L L NN L   P  I +L KL  
Sbjct: 127 TLPAAIGELENLRDLDLGDNQFESFPTVIRKLKNLERLILDNNKLESFPTVIAELRKLQT 186

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L GN L  +PD  G+L  L+ L LS N+LESLP  I  LK L+ L L +NKL  LP  
Sbjct: 187 LELLGNKLKLLPDEIGELKNLQYLNLSLNKLESLPPEIGELKNLQHLFLGDNKLEILPIA 246

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
           I  L    E L+ L LH N L+TLP EI  LK L  L L  N L    V     K   +L
Sbjct: 247 IGEL----ENLQKLYLHRNNLKTLPVEIEKLKELRILQLSGNKLETLPVEIEKLKELRIL 302

Query: 297 ELASRTLK 304
           +L+   L+
Sbjct: 303 QLSGNKLE 310



 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 93/224 (41%), Positives = 123/224 (54%), Gaps = 7/224 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           + TL L  N L   PD   +  NL+ L+LS N++  LP  I     L  L   +N L  E
Sbjct: 184 LQTLELLGNKLKLLPDEIGELKNLQYLNLSLNKLESLPPEIGELKNLQHLFLGDNKL--E 241

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            LP  +  L+NL+   L  N L+  P++I  +  L+ L L  N L  +P EI KL +L +
Sbjct: 242 ILPIAIGELENLQKLYLHRNNLKTLPVEIEKLKELRILQLSGNKLETLPVEIEKLKELRI 301

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L GN L  +P   G+L  L+ L L+DN+LE+LPA+I  L  L+ L L NNKL+ LP+E
Sbjct: 302 LQLSGNKLETLPVAIGELENLQKLYLNDNKLETLPAAIGELDNLRELCLRNNKLKILPSE 361

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L      L+ L L NNKL TLP  I  LK L EL+L  N L
Sbjct: 362 IGELG----DLQYLDLKNNKLETLPAAIGELKNLRELNLSGNKL 401



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/229 (40%), Positives = 132/229 (57%), Gaps = 7/229 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN-N 111
           +K +N++ L+L +N L  FP   ++   L++L+L  N++  LP  I    L  L   N +
Sbjct: 156 RKLKNLERLILDNNKLESFPTVIAELRKLQTLELLGNKLKLLPDEIGE--LKNLQYLNLS 213

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
           L   ESLP ++  LKNL+   L  N+LE  PI I ++  L+ LYL  N+L  +P EI KL
Sbjct: 214 LNKLESLPPEIGELKNLQHLFLGDNKLEILPIAIGELENLQKLYLHRNNLKTLPVEIEKL 273

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
            +L +L L GN L  +P     L +L  L LS N+LE+LP +I  L+ L+ L L++NKL 
Sbjct: 274 KELRILQLSGNKLETLPVEIEKLKELRILQLSGNKLETLPVAIGELENLQKLYLNDNKLE 333

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           TLP  I  L    + L+ L L NNKL+ LP+EI  L  L  L L++N L
Sbjct: 334 TLPAAIGEL----DNLRELCLRNNKLKILPSEIGELGDLQYLDLKNNKL 378



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 109/304 (35%), Positives = 148/304 (48%), Gaps = 38/304 (12%)

Query: 13  SSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPN--------------NDYNKKPENI 58
           S DS+  + V ++ L+ S+++L +  L ++I  L N              +D   + EN+
Sbjct: 58  SIDSNIKRLVKLEKLELSHNNLKA--LPSEIGELKNLQHLVLSNNKLKTLSDVIGELENL 115

Query: 59  DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAES 117
            TL L  N L   P    +  NLR LDL +N+    P  I     L  LI  NN L  ES
Sbjct: 116 STLHLDDNELETLPAAIGELENLRDLDLGDNQFESFPTVIRKLKNLERLILDNNKL--ES 173

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
            P  ++ L+ L+   L GN+L+  P +I ++  L+YL L  N L  +P EI +L  L  L
Sbjct: 174 FPTVIAELRKLQTLELLGNKLKLLPDEIGELKNLQYLNLSLNKLESLPPEIGELKNLQHL 233

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            LG N L  +P   G+L  L+ L L  N L++LP  I  LK L+ L L  NKL TLP EI
Sbjct: 234 FLGDNKLEILPIAIGELENLQKLYLHRNNLKTLPVEIEKLKELRILQLSGNKLETLPVEI 293

Query: 238 ITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             LK L                    E L+ L L++NKL TLP  I  L  L EL LR+N
Sbjct: 294 EKLKELRILQLSGNKLETLPVAIGELENLQKLYLNDNKLETLPAAIGELDNLRELCLRNN 353

Query: 279 PLVI 282
            L I
Sbjct: 354 KLKI 357



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 115/223 (51%), Gaps = 24/223 (10%)

Query: 37  ETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQ 96
           E L  +++LLP  D   + +N+  L L  N L   P    +  NL+ L L +N++  LP 
Sbjct: 188 ELLGNKLKLLP--DEIGELKNLQYLNLSLNKLESLPPEIGELKNLQHLFLGDNKLEILPI 245

Query: 97  AITNFP-LSTL-IARNNLLTA--------------------ESLPKDMSNLKNLKVFNLS 134
           AI     L  L + RNNL T                     E+LP ++  LK L++  LS
Sbjct: 246 AIGELENLQKLYLHRNNLKTLPVEIEKLKELRILQLSGNKLETLPVEIEKLKELRILQLS 305

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
           GN+LE  P+ I ++  L+ LYL +N L  +P  I +L  L  L L  N L  +P   G+L
Sbjct: 306 GNKLETLPVAIGELENLQKLYLNDNKLETLPAAIGELDNLRELCLRNNKLKILPSEIGEL 365

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
             L+ L L +N+LE+LPA+I  LK L+ L L  NKL TLP EI
Sbjct: 366 GDLQYLDLKNNKLETLPAAIGELKNLRELNLSGNKLETLPIEI 408


>gi|421113137|ref|ZP_15573589.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           JET]
 gi|410801511|gb|EKS07677.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           JET]
          Length = 444

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/249 (38%), Positives = 132/249 (53%), Gaps = 22/249 (8%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNN 111
           +K + +  L LY N L+  P+   K  NL+ L+L  N++T LP+ I     L  L   +N
Sbjct: 168 EKLQKLQELHLYSNRLANLPEEIGKLQNLQKLNLGVNQLTALPKGIEKLQKLQQLYLYSN 227

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  +LP+++  L+NL+   L GNQL     +I  +  L+ LYLG N L  +P+EI KL
Sbjct: 228 RLT--NLPEEIEKLQNLRDLYLEGNQLTTLSKEIGKLQNLRDLYLGGNQLTTLPKEIGKL 285

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
            KL  L L G+ LT +P     L  L  L L +NQL +LP  I  L+ L+ L L +NKL 
Sbjct: 286 QKLQTLHLEGSQLTTLPKGIEKLQNLRDLYLENNQLTTLPKGIEKLQNLQELYLSSNKLT 345

Query: 232 TLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSE 272
           TLP EI  L+ L                    +KL+ L L +N+L+TLP EI  L+ L  
Sbjct: 346 TLPEEIEKLQKLQRLDLSKNKLTTLPKEIGKLQKLRGLYLDHNQLKTLPEEIGNLQSLES 405

Query: 273 LSLRDNPLV 281
           L+LR N L 
Sbjct: 406 LNLRGNSLT 414



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/230 (38%), Positives = 124/230 (53%), Gaps = 7/230 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           +K + +  L LY N L+  P+   K  NLR L L  N++T L + I     L  L    N
Sbjct: 214 EKLQKLQQLYLYSNRLTNLPEEIEKLQNLRDLYLEGNQLTTLSKEIGKLQNLRDLYLGGN 273

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  +LPK++  L+ L+  +L G+QL   P  I  +  L+ LYL NN L  +P+ I KL
Sbjct: 274 QLT--TLPKEIGKLQKLQTLHLEGSQLTTLPKGIEKLQNLRDLYLENNQLTTLPKGIEKL 331

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L L  N LT +P+    L +L+ L LS N+L +LP  I  L+ L+ L L +N+L+
Sbjct: 332 QNLQELYLSSNKLTTLPEEIEKLQKLQRLDLSKNKLTTLPKEIGKLQKLRGLYLDHNQLK 391

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           TLP EI  L+ L    +SL L  N L + P EI  L+ L +L L  NP +
Sbjct: 392 TLPEEIGNLQSL----ESLNLRGNSLTSFPEEIGKLQKLQQLYLGGNPFL 437



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/229 (37%), Positives = 121/229 (52%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L  N L   P    K   L+ L+L+ NR+ +LP+ I     L  L   NN 
Sbjct: 77  KLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRLANLPEEIGKLQNLQELHLENNQ 136

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP+++  L+NL+  NL  NQL   P  I  +  L+ L+L +N L ++P EI KL 
Sbjct: 137 LT--TLPEEIGKLQNLQELNLGFNQLTALPKGIEKLQKLQELHLYSNRLANLPEEIGKLQ 194

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L+LG N LT +P     L +L+ L L  N+L +LP  I  L+ L+ L L  N+L T
Sbjct: 195 NLQKLNLGVNQLTALPKGIEKLQKLQQLYLYSNRLTNLPEEIEKLQNLRDLYLEGNQLTT 254

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L  EI  L    + L+ L L  N+L TLP EI  L+ L  L L  + L 
Sbjct: 255 LSKEIGKL----QNLRDLYLGGNQLTTLPKEIGKLQKLQTLHLEGSQLT 299



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 116/216 (53%), Gaps = 9/216 (4%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTAESLPKDMSNL 125
           L   P    K  NLR LDLS+N++  LP+ I     L  L + RN L    +LP+++  L
Sbjct: 68  LWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQKLQKLNLTRNRL---ANLPEEIGKL 124

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           +NL+  +L  NQL   P +I  +  L+ L LG N L  +P+ I KL KL  L L  N L 
Sbjct: 125 QNLQELHLENNQLTTLPEEIGKLQNLQELNLGFNQLTALPKGIEKLQKLQELHLYSNRLA 184

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           ++P+  G L  L+ L L  NQL +LP  I  L+ L+ L L++N+L  LP EI  L    +
Sbjct: 185 NLPEEIGKLQNLQKLNLGVNQLTALPKGIEKLQKLQQLYLYSNRLTNLPEEIEKL----Q 240

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L+ L L  N+L TL  EI  L+ L +L L  N L 
Sbjct: 241 NLRDLYLEGNQLTTLSKEIGKLQNLRDLYLGGNQLT 276


>gi|418755315|ref|ZP_13311522.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964326|gb|EKO32216.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 511

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 99/246 (40%), Positives = 130/246 (52%), Gaps = 22/246 (8%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  +++ L+L +N L+  P+   K  NL  L+LSNN++  LPQ I     L  L   +N 
Sbjct: 220 KLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQLVTLPQEIGALENLQNLHLYSN- 278

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
               +LPK +  L+NL+  +L+ NQL   P +I  +  L+ L L  N L  +P+EI KL 
Sbjct: 279 -QFRTLPKQIWQLQNLQDLHLAHNQLTVLPQEIGQLENLQSLILARNQLKSLPKEIGKLQ 337

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  L L  N LT +P   G L +LE L L DNQL +LP  I  L+ LK L L NN+LR 
Sbjct: 338 KLKWLILANNQLTVLPQEIGQLEKLEDLYLEDNQLTTLPKEIWKLEKLKYLDLANNQLRL 397

Query: 233 LPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           LP EI  L+ L                    EKLK L L NN+L TLP EI  L+ L +L
Sbjct: 398 LPEEIGKLQKLEYLDLSNNQLRLLPQKIGKLEKLKYLDLSNNQLATLPKEIGKLEKLEDL 457

Query: 274 SLRDNP 279
            L  NP
Sbjct: 458 DLSGNP 463



 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/230 (40%), Positives = 125/230 (54%), Gaps = 7/230 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K P ++ +L L  + L           NLR L+L NN++  LP  I     L  L   NN
Sbjct: 35  KNPMDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLATLPNEIGQLENLQVLSLYNN 94

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            L   +LP+++  L+NL+  NL  NQL   P  I  +  L+ L L NN L  +P+EI KL
Sbjct: 95  RLR--TLPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQALNLHNNRLKSLPKEIGKL 152

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
            KL  L LGGN L  +P   G L  LE L LS +QL++ P  I  L+ LK L+L +N+L 
Sbjct: 153 QKLERLYLGGNQLRTLPQEIGTLQDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLV 212

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L  EI  L+     L+ L+L NN+L TLP EI  L+ L EL+L +N LV
Sbjct: 213 VLSQEIGKLRS----LERLILENNQLATLPNEIGKLQNLEELNLSNNQLV 258



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/212 (42%), Positives = 118/212 (55%), Gaps = 9/212 (4%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           EN+  L LY N     P    +  NL+ L L++N++T LPQ I       S ++ARN L 
Sbjct: 268 ENLQNLHLYSNQFRTLPKQIWQLQNLQDLHLAHNQLTVLPQEIGQLENLQSLILARNQL- 326

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
             +SLPK++  L+ LK   L+ NQL   P +I  +  L+ LYL +N L  +P+EI KL K
Sbjct: 327 --KSLPKEIGKLQKLKWLILANNQLTVLPQEIGQLEKLEDLYLEDNQLTTLPKEIWKLEK 384

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L  +P+  G L +LE L LS+NQL  LP  I  L+ LK L L NN+L TL
Sbjct: 385 LKYLDLANNQLRLLPEEIGKLQKLEYLDLSNNQLRLLPQKIGKLEKLKYLDLSNNQLATL 444

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
           P EI  L    EKL+ L L  N   T P EI+
Sbjct: 445 PKEIGKL----EKLEDLDLSGNPFTTFPKEIV 472



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/226 (39%), Positives = 128/226 (56%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           ++++ L L  + L  FP+   K  +L+ L L +N++  L Q I     L  LI  NN L 
Sbjct: 176 QDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLVVLSQEIGKLRSLERLILENNQLA 235

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  L+NL+  NLS NQL   P +I  +  L+ L+L +N    +P++I +L  L
Sbjct: 236 --TLPNEIGKLQNLEELNLSNNQLVTLPQEIGALENLQNLHLYSNQFRTLPKQIWQLQNL 293

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L++LIL+ NQL+SLP  I  L+ LK L+L NN+L  LP
Sbjct: 294 QDLHLAHNQLTVLPQEIGQLENLQSLILARNQLKSLPKEIGKLQKLKWLILANNQLTVLP 353

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L    EKL+ L L +N+L TLP EI  L+ L  L L +N L
Sbjct: 354 QEIGQL----EKLEDLYLEDNQLTTLPKEIWKLEKLKYLDLANNQL 395



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 104/312 (33%), Positives = 155/312 (49%), Gaps = 50/312 (16%)

Query: 15  DSDSFKTVS--IKTL-DFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFF 71
           + D  +T+S  + TL +    +L++  LAT    LPN     + EN+  L LY+N L   
Sbjct: 46  NRDQLRTLSQEVGTLQNLRELNLENNQLAT----LPNEI--GQLENLQVLSLYNNRLRTL 99

Query: 72  PDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA--------------- 115
           P       NLR L+L NN++  LP  I     L  L   NN L +               
Sbjct: 100 PQEVGTLQNLRELNLENNQLATLPNGIGQLENLQALNLHNNRLKSLPKEIGKLQKLERLY 159

Query: 116 ------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREIN 169
                  +LP+++  L++L+  +LS +QL+ FP +I  + +LK L L +N L  + +EI 
Sbjct: 160 LGGNQLRTLPQEIGTLQDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLVVLSQEIG 219

Query: 170 KLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           KL  L  L L  N L  +P+  G L  LE L LS+NQL +LP  I  L+ L++L L++N+
Sbjct: 220 KLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQLVTLPQEIGALENLQNLHLYSNQ 279

Query: 230 LRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCL 270
            RTLP +I  L+ L                    E L+SL+L  N+L++LP EI  L+ L
Sbjct: 280 FRTLPKQIWQLQNLQDLHLAHNQLTVLPQEIGQLENLQSLILARNQLKSLPKEIGKLQKL 339

Query: 271 SELSLRDNPLVI 282
             L L +N L +
Sbjct: 340 KWLILANNQLTV 351


>gi|398341356|ref|ZP_10526059.1| hypothetical protein LkirsB1_19555 [Leptospira kirschneri serovar
           Bim str. 1051]
          Length = 400

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 93/226 (41%), Positives = 131/226 (57%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           EN+ TL LY N L   P+   +  NL++LDLS N +T LP+ I     L  L   +N L 
Sbjct: 161 ENLQTLDLYTNQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSNQL- 219

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            ++LPK++  L+NL+  +LS NQL   P +I  +  L  LYLG N L  +P+E+ +L  L
Sbjct: 220 -KTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKNLLTTLPKEVGQLKNL 278

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L LG N    IP+    L  L  L L +NQ  +LP  I  L+ L+ L L+NN+L+TLP
Sbjct: 279 KMLDLGYNQFKIIPNEIEQLQNLRTLRLRNNQFTALPKEIRQLQNLQVLFLNNNQLKTLP 338

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L    + L+ L L++N+L+TLP EI  L+ L  L LR+N L
Sbjct: 339 NEIEKL----QNLQVLDLNDNQLKTLPNEIEKLQNLQVLDLRNNEL 380



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 101/262 (38%), Positives = 139/262 (53%), Gaps = 18/262 (6%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           + ++ LD S   L  +TL  +I  L         +N+ TL L++N L+  P+   +  NL
Sbjct: 46  LDVRVLDLSEQKL--KTLPKEIGQL---------QNLQTLYLWNNQLTTLPNEIGQLKNL 94

Query: 82  RSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           ++L+L  N++T LP  I     L TL   +N L    LPK+++ L+NL+V  LS NQL+ 
Sbjct: 95  QTLNLDTNQLTTLPNEIGQLINLQTLDLIHNQLVI--LPKEINQLQNLRVLGLSNNQLKI 152

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +I  +  L+ L L  N L  +P EI +L  L  L L  N LT +P   G L  L  L
Sbjct: 153 LPKEIGQLENLQTLDLYTNQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLREL 212

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            LS NQL++LP  I  L+ L++L L +N+L TLP EI  LK L E    L L  N L TL
Sbjct: 213 YLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYE----LYLGKNLLTTL 268

Query: 261 PTEIITLKCLSELSLRDNPLVI 282
           P E+  LK L  L L  N   I
Sbjct: 269 PKEVGQLKNLKMLDLGYNQFKI 290



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 101/274 (36%), Positives = 142/274 (51%), Gaps = 17/274 (6%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K P ++  L L    L   P    +  NL++L L NN++T LP  I     L TL    N
Sbjct: 43  KNPLDVRVLDLSEQKLKTLPKEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTLNLDTN 102

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  +LP ++  L NL+  +L  NQL   P +I  +  L+ L L NN L  +P+EI +L
Sbjct: 103 QLT--TLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEIGQL 160

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L L  N L  +P+  G L  L+ L LS N L  LP  I  LK L+ L L +N+L+
Sbjct: 161 ENLQTLDLYTNQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSNQLK 220

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYK 291
           TLP EI  L    E L++L L +N+L TLP EI  LK L EL L  N L        T  
Sbjct: 221 TLPKEIGQL----ENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKNLL--------TTL 268

Query: 292 PPSLLELASRTLKVHEIDYSQEHLPQNLVQYLES 325
           P  + +L  + LK+ ++ Y+Q  +  N ++ L++
Sbjct: 269 PKEVGQL--KNLKMLDLGYNQFKIIPNEIEQLQN 300



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 101/184 (54%), Gaps = 3/184 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L   P    +  NL++L LS+N++T LP  I     L  L    NLLT
Sbjct: 207 KNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKNLLT 266

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  LKNLK+ +L  NQ +  P +I  +  L+ L L NN    +P+EI +L  L
Sbjct: 267 --TLPKEVGQLKNLKMLDLGYNQFKIIPNEIEQLQNLRTLRLRNNQFTALPKEIRQLQNL 324

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N L  +P+    L  L+ L L+DNQL++LP  I  L+ L+ L L NN+L +  
Sbjct: 325 QVLFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLPNEIEKLQNLQVLDLRNNELSSEE 384

Query: 235 TEII 238
            E I
Sbjct: 385 KERI 388



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 94/165 (56%), Gaps = 4/165 (2%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           L K + N  +++V +LS  +L+  P +I  +  L+ LYL NN L  +P EI +L  L  L
Sbjct: 38  LTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTL 97

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
           +L  N LT +P+  G L  L+ L L  NQL  LP  I+ L+ L+ L L NN+L+ LP EI
Sbjct: 98  NLDTNQLTTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEI 157

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
             L    E L++L L+ N+L+ LP EI  LK L  L L  N L I
Sbjct: 158 GQL----ENLQTLDLYTNQLKALPNEIGQLKNLQTLDLSKNILTI 198



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 4/98 (4%)

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           TD+     +   +  L LS+ +L++LP  I  L+ L++L L NN+L TLP EI  LK   
Sbjct: 36  TDLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQTLYLWNNQLTTLPNEIGQLK--- 92

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
             L++L L  N+L TLP EI  L  L  L L  N LVI
Sbjct: 93  -NLQTLNLDTNQLTTLPNEIGQLINLQTLDLIHNQLVI 129


>gi|418707326|ref|ZP_13268152.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772373|gb|EKR47561.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|456971331|gb|EMG11964.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 354

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 97/226 (42%), Positives = 128/226 (56%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +  NL+ LDL +N++T LPQ I     L  L   +N LT
Sbjct: 92  KNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLT 151

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +L KD+  L+NLK  +LS NQL   P +I  +  LK LYL  N     P+EI +L  L
Sbjct: 152 --TLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNL 209

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N +T +P+    L +L+ L LSDNQL +LP  I  L+ L++L L NN+L+TLP
Sbjct: 210 KVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLENLQTLDLRNNQLKTLP 269

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  LK     L++L L NN+L  LP EI  LK L  LSL  N L
Sbjct: 270 KEIEQLK----NLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQL 311



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/248 (37%), Positives = 127/248 (51%), Gaps = 22/248 (8%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P  +  L L    L   P    K  NL+ L L  N++T LPQ I     L  L  R+N L
Sbjct: 45  PLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 104

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +LPK++  LKNL+V +L  NQL   P +I  +  L+ LYL +N L  + ++I +L  
Sbjct: 105 T--TLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQN 162

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P+    L  L++L LS+NQ  + P  I  L+ LK L L+NN++  L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 234 PTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           P EI  LK L                    E L++L L NN+L+TLP EI  LK L  L 
Sbjct: 223 PNEIAKLKKLQYLYLSDNQLITLPKEIEQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLF 282

Query: 275 LRDNPLVI 282
           L +N L I
Sbjct: 283 LSNNQLTI 290



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/202 (39%), Positives = 111/202 (54%), Gaps = 7/202 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L+ N L+    +  +  NL+SLDLSNN++T LP  I     L +L    N   
Sbjct: 138 KNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFA 197

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+NLKV  L+ NQ+   P +I  +  L+YLYL +N L  +P+EI +L  L
Sbjct: 198 --TFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLENL 255

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P     L  L+ L LS+NQL  LP  I  LK L  L L  N+L TLP
Sbjct: 256 QTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQLTTLP 315

Query: 235 TEIITLKCLSEKLKSLLLHNNK 256
            EI  LK     L++L L+NN+
Sbjct: 316 NEIEQLK----NLQTLYLNNNQ 333



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 91/165 (55%), Gaps = 4/165 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N   ++V +LS  +L+  PI+I  +  L+ LYL  N L  +P+EI +L  
Sbjct: 34  TYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P     L  L+ L L  NQL  LP  I  LK L+ L LH+N+L TL
Sbjct: 94  LQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTL 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             +I  L    + LKSL L NN+L TLP EI  LK L  L L +N
Sbjct: 154 SKDIEQL----QNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 72/208 (34%), Positives = 110/208 (52%), Gaps = 16/208 (7%)

Query: 3   YNYGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLL 62
           Y + +  ++ S D +  +  ++K+LD S + L   TL  +IE L         +N+ +L 
Sbjct: 144 YLHSNRLTTLSKDIEQLQ--NLKSLDLSNNQLT--TLPNEIEQL---------KNLKSLY 190

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L  N  + FP    +  NL+ L L+NN+IT LP  I     L  L   +N L   +LPK+
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLI--TLPKE 248

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L+NL+  +L  NQL+  P +I  +  L+ L+L NN L  +P+EI KL  L  LSL  
Sbjct: 249 IEQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQEIGKLKNLLWLSLVY 308

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLES 209
           N LT +P+    L  L+ L L++NQ  S
Sbjct: 309 NQLTTLPNEIEQLKNLQTLYLNNNQFSS 336



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 54/102 (52%), Gaps = 11/102 (10%)

Query: 188 PDTFGDL-------YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           P T+ DL        ++  L LS  +L++LP  I  LK L+ L LH N+L  LP EI  L
Sbjct: 32  PGTYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQL 91

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           K     L+ L L +N+L TLP EI  LK L  L L  N L +
Sbjct: 92  K----NLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTV 129


>gi|456875041|gb|EMF90275.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 528

 Score =  132 bits (333), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 94/227 (41%), Positives = 127/227 (55%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    K  NL  LDL  N++T LP+ I     L  L    N LT
Sbjct: 79  QNLKILGLGSNQLTTLPKEVGKLQNLEELDLGQNQLTTLPEEIGKLQNLQKLNLNQNQLT 138

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++ NL+ L+   L  NQ    P  I  +  L+ L LG N L  +P+EI KL KL
Sbjct: 139 --TLPKEIGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDLGINQLTTLPKEIEKLQKL 196

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L LG N LT +P   G+L +L+ L L+ NQL +LP  I  L+ L++L L++N+L TLP
Sbjct: 197 QELDLGINQLTTLPKEIGNLQKLQTLNLNHNQLTNLPKEIGKLQKLQTLNLNHNQLTTLP 256

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L    + L+ L L++N+L TLP EI  L+ L EL L DN L 
Sbjct: 257 KEIGNL----QNLQQLYLYSNQLTTLPKEIEKLQKLQELHLSDNQLT 299



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/230 (39%), Positives = 133/230 (57%), Gaps = 7/230 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K +N++ L L  N L+  P+   K  NL+ L+L+ N++T LP+ I N   L  L   +N 
Sbjct: 100 KLQNLEELDLGQNQLTTLPEEIGKLQNLQKLNLNQNQLTTLPKEIGNLQKLQELYLGDNQ 159

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
               +LPK +  L+ L+  +L  NQL   P +I  +  L+ L LG N L  +P+EI  L 
Sbjct: 160 FA--TLPKAIGKLQKLQELDLGINQLTTLPKEIEKLQKLQELDLGINQLTTLPKEIGNLQ 217

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  L+L  N LT++P   G L +L+ L L+ NQL +LP  I NL+ L+ L L++N+L T
Sbjct: 218 KLQTLNLNHNQLTNLPKEIGKLQKLQTLNLNHNQLTTLPKEIGNLQNLQQLYLYSNQLTT 277

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           LP EI  L    +KL+ L L +N+L ++P EI  L+ L +LSL  N L I
Sbjct: 278 LPKEIEKL----QKLQELHLSDNQLTSVPEEIGNLQNLQKLSLHSNQLTI 323



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/227 (39%), Positives = 129/227 (56%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L+  P    K   L+ L LS+N++T +P+ I N   L  L   +N LT
Sbjct: 263 QNLQQLYLYSNQLTTLPKEIEKLQKLQELHLSDNQLTSVPEEIGNLQNLQKLSLHSNQLT 322

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +PK++ NL+ L+  +L  NQL   P +I ++  L+ L LGNN L  +P+EI KL   
Sbjct: 323 I--IPKEIGNLQKLEELDLGQNQLTILPKEIGNLQKLQTLDLGNNKLTALPKEIGKLQNP 380

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G+L +L+ L L+ N L ++P  I +L+ L+ L L++N+L TLP
Sbjct: 381 QTLYLNRNQLTTLPKEIGNLQKLKWLYLAHNNLATIPQEIGSLQSLQVLTLNSNRLTTLP 440

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L    + L+ L L  N+L TLP EI  L+ L  L L +NPL 
Sbjct: 441 KEIGNL----QNLQGLNLDKNQLTTLPKEIGKLRNLESLDLSENPLT 483



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/229 (40%), Positives = 129/229 (56%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K + + TL L HN L+  P       NL+ L L +N++T LP+ I     L  L   +N 
Sbjct: 238 KLQKLQTLNLNHNQLTTLPKEIGNLQNLQQLYLYSNQLTTLPKEIEKLQKLQELHLSDNQ 297

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  S+P+++ NL+NL+  +L  NQL   P +I ++  L+ L LG N L  +P+EI  L 
Sbjct: 298 LT--SVPEEIGNLQNLQKLSLHSNQLTIIPKEIGNLQKLEELDLGQNQLTILPKEIGNLQ 355

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  L LG N LT +P   G L   + L L+ NQL +LP  I NL+ LK L L +N L T
Sbjct: 356 KLQTLDLGNNKLTALPKEIGKLQNPQTLYLNRNQLTTLPKEIGNLQKLKWLYLAHNNLAT 415

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +P EI +L+     L+ L L++N+L TLP EI  L+ L  L+L  N L 
Sbjct: 416 IPQEIGSLQS----LQVLTLNSNRLTTLPKEIGNLQNLQGLNLDKNQLT 460



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 101/263 (38%), Positives = 139/263 (52%), Gaps = 18/263 (6%)

Query: 20  KTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFT 79
           K   ++ LD   + L   TL  +IE         K + +  L L  N L+  P       
Sbjct: 169 KLQKLQELDLGINQLT--TLPKEIE---------KLQKLQELDLGINQLTTLPKEIGNLQ 217

Query: 80  NLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
            L++L+L++N++T+LP+ I     L TL   +N LT  +LPK++ NL+NL+   L  NQL
Sbjct: 218 KLQTLNLNHNQLTNLPKEIGKLQKLQTLNLNHNQLT--TLPKEIGNLQNLQQLYLYSNQL 275

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
              P +I  +  L+ L+L +N L  VP EI  L  L  LSL  N LT IP   G+L +LE
Sbjct: 276 TTLPKEIEKLQKLQELHLSDNQLTSVPEEIGNLQNLQKLSLHSNQLTIIPKEIGNLQKLE 335

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L L  NQL  LP  I NL+ L++L L NNKL  LP EI  L    +  ++L L+ N+L 
Sbjct: 336 ELDLGQNQLTILPKEIGNLQKLQTLDLGNNKLTALPKEIGKL----QNPQTLYLNRNQLT 391

Query: 259 TLPTEIITLKCLSELSLRDNPLV 281
           TLP EI  L+ L  L L  N L 
Sbjct: 392 TLPKEIGNLQKLKWLYLAHNNLA 414



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 86/218 (39%), Positives = 126/218 (57%), Gaps = 7/218 (3%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
           +N L+  P       NL+ L L +N++T LP+ +     L  L    N LT  +LP+++ 
Sbjct: 65  NNQLTTLPKEIENLQNLKILGLGSNQLTTLPKEVGKLQNLEELDLGQNQLT--TLPEEIG 122

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            L+NL+  NL+ NQL   P +I ++  L+ LYLG+N    +P+ I KL KL  L LG N 
Sbjct: 123 KLQNLQKLNLNQNQLTTLPKEIGNLQKLQELYLGDNQFATLPKAIGKLQKLQELDLGINQ 182

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT +P     L +L+ L L  NQL +LP  I NL+ L++L L++N+L  LP EI  L   
Sbjct: 183 LTTLPKEIEKLQKLQELDLGINQLTTLPKEIGNLQKLQTLNLNHNQLTNLPKEIGKL--- 239

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            +KL++L L++N+L TLP EI  L+ L +L L  N L 
Sbjct: 240 -QKLQTLNLNHNQLTTLPKEIGNLQNLQQLYLYSNQLT 276



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/210 (39%), Positives = 115/210 (54%), Gaps = 7/210 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N+  L L+ N L+  P        L  LDL  N++T LP+ I N   L TL   NN LT
Sbjct: 309 QNLQKLSLHSNQLTIIPKEIGNLQKLEELDLGQNQLTILPKEIGNLQKLQTLDLGNNKLT 368

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  LPK++  L+N +   L+ NQL   P +I ++  LK+LYL +N+L  +P+EI  L  L
Sbjct: 369 A--LPKEIGKLQNPQTLYLNRNQLTTLPKEIGNLQKLKWLYLAHNNLATIPQEIGSLQSL 426

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL+L  N LT +P   G+L  L+ L L  NQL +LP  I  L+ L+SL L  N L + P
Sbjct: 427 QVLTLNSNRLTTLPKEIGNLQNLQGLNLDKNQLTTLPKEIGKLRNLESLDLSENPLTSFP 486

Query: 235 TEIITLKCLS----EKLKSLLLHNNKLRTL 260
            EI  L+ L     E + +LL    K+R L
Sbjct: 487 EEIGKLQHLKWLRLENIPTLLPQKEKIRKL 516



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/148 (43%), Positives = 85/148 (57%), Gaps = 4/148 (2%)

Query: 134 SGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGD 193
           S NQL   P +I ++  LK L LG+N L  +P+E+ KL  L  L LG N LT +P+  G 
Sbjct: 64  SNNQLTTLPKEIENLQNLKILGLGSNQLTTLPKEVGKLQNLEELDLGQNQLTTLPEEIGK 123

Query: 194 LYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLH 253
           L  L+ L L+ NQL +LP  I NL+ L+ L L +N+  TLP  I  L    +KL+ L L 
Sbjct: 124 LQNLQKLNLNQNQLTTLPKEIGNLQKLQELYLGDNQFATLPKAIGKL----QKLQELDLG 179

Query: 254 NNKLRTLPTEIITLKCLSELSLRDNPLV 281
            N+L TLP EI  L+ L EL L  N L 
Sbjct: 180 INQLTTLPKEIEKLQKLQELDLGINQLT 207


>gi|456823117|gb|EMF71587.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 389

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/228 (42%), Positives = 129/228 (56%), Gaps = 7/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +  NL+ LDL +N++T LPQ I     L  L   +N LT
Sbjct: 92  KNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLT 151

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +L KD+  L+NLK  +LS NQL   P +I  +  LK LYL  N     P+EI +L  L
Sbjct: 152 --TLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNL 209

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N +T +P+    L +L+ L LSDNQL +LP  I  LK L++L L  N+L  LP
Sbjct: 210 KVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILP 269

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            E+  L    E L++L L NN+L+TLP EI  LK L  L L +N L+I
Sbjct: 270 KEVGQL----ENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLII 313



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/224 (41%), Positives = 125/224 (55%), Gaps = 7/224 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L+ N L+    +  +  NL+SLDLSNN++T LP  I     L +L    N   
Sbjct: 138 KNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFA 197

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+NLKV  L+ NQ+   P +I  +  L+YLYL +N L  +P+EI +L  L
Sbjct: 198 --TFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNL 255

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L+ L L +NQL++LP  I  LK L++L L NN+L  LP
Sbjct: 256 QTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLIILP 315

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK L      L L  N+L TLP EI  LK L  L L +N
Sbjct: 316 QEIGKLKNLL----WLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 355



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 92/229 (40%), Positives = 123/229 (53%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P  +  L L    L   P    K  NL+ L L  N++T LPQ I     L  L  R+N L
Sbjct: 45  PLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 104

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +LPK++  LKNL+V +L  NQL   P +I  +  L+ LYL +N L  + ++I +L  
Sbjct: 105 T--TLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQN 162

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P+    L  L++L LS+NQ  + P  I  L+ LK L L+NN++  L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK    KL+ L L +N+L TLP EI  LK L  L L  N L I
Sbjct: 223 PNEIAKLK----KLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTI 267



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 95/226 (42%), Positives = 123/226 (54%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +  NL+ L L +NR+T L + I     L +L   NN LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  LKNLK   LS NQ   FP +I  +  LK L+L NN +  +P EI KL KL
Sbjct: 175 --TLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKL 232

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P     L  L+ L LS NQL  LP  +  L+ L++L L NN+L+TLP
Sbjct: 233 QYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLP 292

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  LK     L++L L NN+L  LP EI  LK L  LSL  N L
Sbjct: 293 KEIEQLK----NLQTLFLSNNQLIILPQEIGKLKNLLWLSLVYNQL 334



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 81/228 (35%), Positives = 119/228 (52%), Gaps = 16/228 (7%)

Query: 3   YNYGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLL 62
           Y + +  ++ S D +  +  ++K+LD S + L   TL  +IE L         +N+ +L 
Sbjct: 144 YLHSNRLTTLSKDIEQLQ--NLKSLDLSNNQLT--TLPNEIEQL---------KNLKSLY 190

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L  N  + FP    +  NL+ L L+NN+IT LP  I     L  L   +N L   +LPK+
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLI--TLPKE 248

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  LKNL+  +LS NQL   P ++  +  L+ L L NN L  +P+EI +L  L  L L  
Sbjct: 249 IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSN 308

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           N L  +P   G L  L  L L  NQL +LP  I  LK L++L L+NN+
Sbjct: 309 NQLIILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQ 356



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 91/165 (55%), Gaps = 4/165 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N   ++V +LS  +L+  PI+I  +  L+ LYL  N L  +P+EI +L  
Sbjct: 34  TYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P     L  L+ L L  NQL  LP  I  LK L+ L LH+N+L TL
Sbjct: 94  LQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTL 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             +I  L    + LKSL L NN+L TLP EI  LK L  L L +N
Sbjct: 154 SKDIEQL----QNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 54/102 (52%), Gaps = 11/102 (10%)

Query: 188 PDTFGDL-------YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           P T+ DL        ++  L LS  +L++LP  I  LK L+ L LH N+L  LP EI  L
Sbjct: 32  PGTYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQL 91

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           K     L+ L L +N+L TLP EI  LK L  L L  N L +
Sbjct: 92  K----NLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTV 129


>gi|421108955|ref|ZP_15569484.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
 gi|410005922|gb|EKO59704.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
          Length = 400

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 90/226 (39%), Positives = 126/226 (55%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L +N L+  P+   +  NL+ L L NN++  LP+ I     L TL   NN LT
Sbjct: 115 QNLQELYLNYNQLTILPNEIGQLKNLQRLHLFNNQLMTLPKEIGQLKNLQTLYLWNNQLT 174

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  LKNL+VF L+ NQL   P +I  +  L+ L L NN L  +P+EI +L  L
Sbjct: 175 --TLPKEIGQLKNLQVFELNNNQLTTLPEEIGKLKNLQVLELNNNQLTTLPKEIGQLKNL 232

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L LG N  T +P+  G L  L+ L L DNQ + +P  I  LK L+ L LH+N+ + +P
Sbjct: 233 QWLDLGYNQFTILPEEIGKLKNLQVLHLHDNQFKIIPKEIGKLKNLQVLHLHDNQFKIIP 292

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  LK     LK L L  N+ + +P EI  L+ L  L+L  N L
Sbjct: 293 KEIGKLK----NLKMLSLGYNQFKIIPKEIEQLQNLQWLNLDANQL 334



 Score =  129 bits (323), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 99/262 (37%), Positives = 136/262 (51%), Gaps = 18/262 (6%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           + ++ LD S   L  +TL  +IE L         +N+  L L +N L   P    +  NL
Sbjct: 46  LDVRVLDLSEQKL--KTLPNEIEQL---------KNLQRLYLSYNQLKTLPKEIGQLQNL 94

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           R L+L +N++T LP+ I     L  L    N LT   LP ++  LKNL+  +L  NQL  
Sbjct: 95  RVLELIHNQLTTLPKEIGRLQNLQELYLNYNQLTI--LPNEIGQLKNLQRLHLFNNQLMT 152

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +I  +  L+ LYL NN L  +P+EI +L  L V  L  N LT +P+  G L  L+ L
Sbjct: 153 LPKEIGQLKNLQTLYLWNNQLTTLPKEIGQLKNLQVFELNNNQLTTLPEEIGKLKNLQVL 212

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L++NQL +LP  I  LK L+ L L  N+   LP EI  LK     L+ L LH+N+ + +
Sbjct: 213 ELNNNQLTTLPKEIGQLKNLQWLDLGYNQFTILPEEIGKLK----NLQVLHLHDNQFKII 268

Query: 261 PTEIITLKCLSELSLRDNPLVI 282
           P EI  LK L  L L DN   I
Sbjct: 269 PKEIGKLKNLQVLHLHDNQFKI 290



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/211 (37%), Positives = 114/211 (54%), Gaps = 7/211 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+    L +N L+  P+   K  NL+ L+L+NN++T LP+ I     L  L    N  T
Sbjct: 184 KNLQVFELNNNQLTTLPEEIGKLKNLQVLELNNNQLTTLPKEIGQLKNLQWLDLGYNQFT 243

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP+++  LKNL+V +L  NQ +  P +I  +  L+ L+L +N    +P+EI KL  L
Sbjct: 244 I--LPEEIGKLKNLQVLHLHDNQFKIIPKEIGKLKNLQVLHLHDNQFKIIPKEIGKLKNL 301

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +LSLG N    IP     L  L+ L L  NQL +LP  I  L+ L+ L L  N+ +TLP
Sbjct: 302 KMLSLGYNQFKIIPKEIEQLQNLQWLNLDANQLTTLPKEIEQLQNLQELYLSYNQFKTLP 361

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
            EI  LK     LK L L+N++L +   E I
Sbjct: 362 KEIGQLK----NLKKLYLNNHQLSSEEKERI 388



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/187 (41%), Positives = 106/187 (56%), Gaps = 5/187 (2%)

Query: 94  LPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKY 153
           L +AI N PL   +   +    ++LP ++  LKNL+   LS NQL+  P +I  +  L+ 
Sbjct: 38  LTEAIQN-PLDVRVLDLSEQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRV 96

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           L L +N L  +P+EI +L  L  L L  N LT +P+  G L  L+ L L +NQL +LP  
Sbjct: 97  LELIHNQLTTLPKEIGRLQNLQELYLNYNQLTILPNEIGQLKNLQRLHLFNNQLMTLPKE 156

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           I  LK L++L L NN+L TLP EI  LK     L+   L+NN+L TLP EI  LK L  L
Sbjct: 157 IGQLKNLQTLYLWNNQLTTLPKEIGQLK----NLQVFELNNNQLTTLPEEIGKLKNLQVL 212

Query: 274 SLRDNPL 280
            L +N L
Sbjct: 213 ELNNNQL 219



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/167 (41%), Positives = 93/167 (55%), Gaps = 4/167 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L + + N  +++V +LS  +L+  P +I  +  L+ LYL  N L  +P+EI +L  
Sbjct: 34  TYMDLTEAIQNPLDVRVLDLSEQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L VL L  N LT +P   G L  L+ L L+ NQL  LP  I  LK L+ L L NN+L TL
Sbjct: 94  LRVLELIHNQLTTLPKEIGRLQNLQELYLNYNQLTILPNEIGQLKNLQRLHLFNNQLMTL 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P EI  LK     L++L L NN+L TLP EI  LK L    L +N L
Sbjct: 154 PKEIGQLK----NLQTLYLWNNQLTTLPKEIGQLKNLQVFELNNNQL 196



 Score = 41.6 bits (96), Expect = 0.61,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 58/126 (46%), Gaps = 28/126 (22%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLL 113
           K +N+  L L +N     P    +  NL+ L+L  N++T                     
Sbjct: 297 KLKNLKMLSLGYNQFKIIPKEIEQLQNLQWLNLDANQLT--------------------- 335

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INKL- 171
              +LPK++  L+NL+   LS NQ +  P +I  +  LK LYL N+ L+   +E I KL 
Sbjct: 336 ---TLPKEIEQLQNLQELYLSYNQFKTLPKEIGQLKNLKKLYLNNHQLSSEEKERIRKLL 392

Query: 172 --CKLH 175
             C+++
Sbjct: 393 PKCQIY 398


>gi|24215148|ref|NP_712629.1| hypothetical protein LA_2448 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074467|ref|YP_005988784.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|417776841|ref|ZP_12424673.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418672944|ref|ZP_13234274.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|24196218|gb|AAN49647.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
           56601]
 gi|353458256|gb|AER02801.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|410573337|gb|EKQ36387.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410580051|gb|EKQ47882.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 428

 Score =  132 bits (332), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 99/229 (43%), Positives = 131/229 (57%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+ TL L  N L+  P  + K  NL+ L+LS+N++T LPQ I     L TL  ++N 
Sbjct: 138 KLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQ 197

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +L K++  LKNL+  NLS NQL   PI+I  +  L  L L +N L  +P EI KL 
Sbjct: 198 LT--TLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQ 255

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            LH L+L  N LT +P   G L  L  L LS NQL +L   I  L+ L+ L LH+N+L T
Sbjct: 256 NLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTT 315

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L  EI  LK     L++L L  N+L  LP EI  L+ L EL+L +N L 
Sbjct: 316 LSKEIEQLK----NLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLT 360



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/230 (42%), Positives = 127/230 (55%), Gaps = 7/230 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K EN+  L LY N L+  P    K  NL++L LS+N++T LP+       L  L   +N 
Sbjct: 115 KLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQ 174

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP+++  L+NL+  NL  NQL     +I  +  L+ L L +N L  +P EI KL 
Sbjct: 175 LT--TLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQ 232

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            LH L+L  N LT +P   G L  L  L LSDNQL +LP  I  L+ L +L L  N+L T
Sbjct: 233 NLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTT 292

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           L  EI  L    + L+ L LH+N+L TL  EI  LK L  LSL  N LVI
Sbjct: 293 LSIEIGKL----QNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVI 338



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/230 (39%), Positives = 124/230 (53%), Gaps = 7/230 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           + P N+  L L   N +  P    +  NL+ L L +NR+  LP+ I     L  L   +N
Sbjct: 45  QNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSN 104

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT   LPK++  L+NL+  +L  N+L   PI+I  +  L+ LYL +N L  +PRE  KL
Sbjct: 105 QLTI--LPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKL 162

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L+L  N LT +P   G L  L+ L L  NQL +L   I  LK L++L L +N+L 
Sbjct: 163 ENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLT 222

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           TLP EI  L    + L +L L +N+L TLP EI  L+ L  L+L DN L 
Sbjct: 223 TLPIEIGKL----QNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLT 268



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 95/261 (36%), Positives = 137/261 (52%), Gaps = 18/261 (6%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           ++++ LD S  +    TL  +IE L         +N+  L L+ N L   P    +  NL
Sbjct: 48  LNVRVLDLSGQNFT--TLPKEIEQL---------KNLQKLYLFDNRLKTLPKEIGQLKNL 96

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           + L+LS+N++T LP+ I     L  L   +N LT   LP ++  L+NL+   LS NQL  
Sbjct: 97  QELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI--LPIEIGKLQNLQTLYLSSNQLTT 154

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +   +  L+ L L +N L  +P+EI +L  L  L+L  N LT +      L  L+ L
Sbjct: 155 LPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTL 214

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            LSDNQL +LP  I  L+ L +L L +N+L TLP EI  L    + L +L L +N+L TL
Sbjct: 215 NLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKL----QNLHTLNLSDNQLTTL 270

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P EI  L+ L  L+L  N L 
Sbjct: 271 PIEIGKLQNLHTLNLSGNQLT 291



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 77/190 (40%), Positives = 106/190 (55%), Gaps = 3/190 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  P    K  NL +L+LS+N++T LP  I     L TL   +N LT
Sbjct: 209 KNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLT 268

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  L+NL   NLSGNQL    I+I  +  L+ L L +N L  + +EI +L  L
Sbjct: 269 --TLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNL 326

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             LSL  N L  +P   G L  L+ L L +NQL +LP  I  L+ L++L L+ N+L T P
Sbjct: 327 QTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFP 386

Query: 235 TEIITLKCLS 244
            EI  LK L 
Sbjct: 387 KEIGQLKNLQ 396



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 94/171 (54%), Gaps = 4/171 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  N++V +LSG      P +I  +  L+ LYL +N L  +P+EI +L  
Sbjct: 36  TYMDLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N LT +P   G L  L+ L L DN+L  LP  I  L+ L++L L +N+L TL
Sbjct: 96  LQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRF 284
           P E   L    E L+ L L +N+L TLP EI  L+ L  L+L+ N L   F
Sbjct: 156 PRESGKL----ENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLF 202



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 93/177 (52%), Gaps = 5/177 (2%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+ TL L  N L+  P    K  NL +L+LS+N++T LP  I     L TL    N 
Sbjct: 230 KLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQ 289

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  S+  ++  L+NL+  NL  NQL     +I  +  L+ L L  N L  +P+EI +L 
Sbjct: 290 LTTLSI--EIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQ 347

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL--HN 227
            L  L+L  N LT +P   G L  L+ L L  N+L + P  I  LK L++L L  HN
Sbjct: 348 NLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHN 404



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 53/102 (51%), Gaps = 11/102 (10%)

Query: 188 PDTFGDLYQ-------LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           P T+ DL +       +  L LS     +LP  I  LK L+ L L +N+L+TLP EI  L
Sbjct: 34  PGTYMDLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQL 93

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           K L E    L L +N+L  LP EI  L+ L  L L DN L I
Sbjct: 94  KNLQE----LNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131


>gi|418668203|ref|ZP_13229606.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756060|gb|EKR17687.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 378

 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 109/276 (39%), Positives = 147/276 (53%), Gaps = 23/276 (8%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPN--------NDYNKKPENIDTL----LLY--HNN 67
           + ++ LD S   L  +TL  +I  L N        N     P+ I+ L    LLY   N 
Sbjct: 47  LEVRVLDLSRQEL--KTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR 104

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           L+  P+   +  NL+ LDL +N++T LPQ I     L  L   +N LT  +L KD+  L+
Sbjct: 105 LTTLPNEIEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLT--TLSKDIEQLQ 162

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NLK  +LS NQL   P +I  +  LK LYL  N     P+EI +L  L VL L  N +T 
Sbjct: 163 NLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITI 222

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P+    L +L+ L LSDNQL +LP  I  LK L++L L  N+L  LP E+  L    E 
Sbjct: 223 LPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQL----EN 278

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           L++L L NN+L+TLP EI  LK L  L L +N L I
Sbjct: 279 LQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTI 314



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/224 (41%), Positives = 125/224 (55%), Gaps = 7/224 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L+ N L+    +  +  NL+SLDLSNN++T LP  I     L +L    N   
Sbjct: 139 KNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN--Q 196

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+NLKV  L+ NQ+   P +I  +  L+YLYL +N L  +P+EI +L  L
Sbjct: 197 FATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNL 256

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L+ L L +NQL++LP  I  LK L++L L NN+L  LP
Sbjct: 257 QTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILP 316

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK     L  L L  N+L TLP EI  LK L  L L +N
Sbjct: 317 QEIGKLK----NLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 356



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/229 (39%), Positives = 122/229 (53%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P  +  L L    L   P    +  NL+ L L  N++T LPQ I     L  L  R+N L
Sbjct: 46  PLEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 105

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +LP ++  LKNL+V +L  NQL   P +I  +  L+ LYL +N L  + ++I +L  
Sbjct: 106 T--TLPNEIEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQN 163

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P+    L  L++L LS+NQ  + P  I  L+ LK L L+NN++  L
Sbjct: 164 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 223

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK    KL+ L L +N+L TLP EI  LK L  L L  N L I
Sbjct: 224 PNEIAKLK----KLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTI 268



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 82/228 (35%), Positives = 120/228 (52%), Gaps = 16/228 (7%)

Query: 3   YNYGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLL 62
           Y + +  ++ S D +  +  ++K+LD S + L   TL  +IE L         +N+ +L 
Sbjct: 145 YLHSNRLTTLSKDIEQLQ--NLKSLDLSNNQLT--TLPNEIEQL---------KNLKSLY 191

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L  N  + FP    +  NL+ L L+NN+IT LP  I     L  L   +N L   +LPK+
Sbjct: 192 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLI--TLPKE 249

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  LKNL+  +LS NQL   P ++  +  L+ L L NN L  +P+EI +L  L  L L  
Sbjct: 250 IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSN 309

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           N LT +P   G L  L  L L  NQL +LP  I  LK L++L L+NN+
Sbjct: 310 NQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQ 357



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 92/165 (55%), Gaps = 4/165 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N   ++V +LS  +L+  PI+I  +  L+ LYL  N L  +P+EI +L  
Sbjct: 35  TYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKN 94

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P+    L  L+ L L  NQL  LP  I  LK L+ L LH+N+L TL
Sbjct: 95  LQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTL 154

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             +I  L    + LKSL L NN+L TLP EI  LK L  L L +N
Sbjct: 155 SKDIEQL----QNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 195



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 57/111 (51%), Gaps = 5/111 (4%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           CK+      G +  D+     +  ++  L LS  +L++LP  I  LK L+ L LH N+L 
Sbjct: 25  CKIQACEEPG-TYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLT 83

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            LP EI  LK     L+ L L +N+L TLP EI  LK L  L L  N L I
Sbjct: 84  VLPQEIEQLK----NLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTI 130


>gi|418668202|ref|ZP_13229605.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756059|gb|EKR17686.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 378

 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/229 (41%), Positives = 125/229 (54%), Gaps = 7/229 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L++N L        +  NL+ L L NN++T  P+ I     L +L   NN LT
Sbjct: 139 QNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLT 198

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+NL+   LS NQL  FP +I  +  L++L LG+N L  +P EI KL KL
Sbjct: 199 --TFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKL 256

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N LT IP   G L  L+ L LS NQ +++P     LK LK L L  N+L  LP
Sbjct: 257 QELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALP 316

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
            EI  LK     LK L L  N+L T+P EI  L+ L  L LR+N L I 
Sbjct: 317 KEIGKLK----NLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQLSIE 361



 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 92/221 (41%), Positives = 120/221 (54%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L +N L+  P    +  NL+ L+L NN++  + + I     L  L   NN LTA   P
Sbjct: 121 LYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTA--FP 178

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
           K++  L+NLK   LS NQL  FP +I  +  L+ LYL NN L   P+EI KL KL  L L
Sbjct: 179 KEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGL 238

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
           G N LT IP+  G L +L+ L L  NQL ++P  I  L+ L+ L L  N+ +T+P E   
Sbjct: 239 GDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQ 298

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           LK     LK L L  N+L  LP EI  LK L  L+L  N L
Sbjct: 299 LK----NLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQL 335



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/226 (37%), Positives = 111/226 (49%), Gaps = 28/226 (12%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLT 114
           P ++  L+L    L   P+   +  NL+ LDLS+N++                       
Sbjct: 46  PLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLI---------------------- 83

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  LKNL+   L+ NQL  FP +I  + +L  LYL NN L  +P EI +L  L
Sbjct: 84  --ILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNL 141

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N L  I      L  L+ L L +NQL + P  I  L+ LKSL L NN+L T P
Sbjct: 142 QELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFP 201

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L+ L E    L L NN+L T P EI  L+ L  L L DN L
Sbjct: 202 KEIGKLQNLQE----LYLSNNQLTTFPKEIGKLQKLQWLGLGDNQL 243



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/182 (37%), Positives = 90/182 (49%), Gaps = 19/182 (10%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           L K   N  +++V  LS  +L+  P +I  +  L+ L L +N L  +P+EI +L  L  L
Sbjct: 39  LTKAFQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQEL 98

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            L  N LT  P     L  L  L LS+NQL  LP  I  L+ L+ L L NN+L+T+  EI
Sbjct: 99  FLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEI 158

Query: 238 ITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             LK L                    + LKSL L NN+L T P EI  L+ L EL L +N
Sbjct: 159 EQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNN 218

Query: 279 PL 280
            L
Sbjct: 219 QL 220



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 3/133 (2%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K + +  L L  N L+  P+   K   L+ L+L  N++T +P+ I     L  L    N 
Sbjct: 229 KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYN- 287

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
              +++P +   LKNLK+ +L  NQL   P +I  +  LK L L  N L  +P+EI +L 
Sbjct: 288 -QFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQLQ 346

Query: 173 KLHVLSLGGNSLT 185
            L  L L  N L+
Sbjct: 347 NLQTLYLRNNQLS 359



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 54/97 (55%), Gaps = 4/97 (4%)

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           D+   F +   +  LILS+ +L+ LP  I  LK L+ L L +N+L  LP EI  LK L E
Sbjct: 38  DLTKAFQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQE 97

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
               L L+ N+L T P EI  LK L +L L +N L I
Sbjct: 98  ----LFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTI 130



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 11/117 (9%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLP---QAITNFPLSTLIARNNLLTAESLPKDM 122
           N L+  P    +  NL+ L LS N+   +P     + N  + +L A  N LTA  LPK++
Sbjct: 264 NQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDA--NQLTA--LPKEI 319

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INKL---CKLH 175
             LKNLK+ NL  NQL   P +I  +  L+ LYL NN L+   +E I KL   C+++
Sbjct: 320 GKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQLSIEEKERIRKLFPKCQIY 376


>gi|421127514|ref|ZP_15587738.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410435604|gb|EKP84736.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 470

 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/226 (42%), Positives = 128/226 (56%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P+   +  NL+ LDL +N++T LPQ I     L  L   +N LT
Sbjct: 185 KNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLT 244

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +L KD+  L+NLK  +LS NQL   P +I  +  LK LYL  N     P+EI +L  L
Sbjct: 245 --TLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNL 302

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N +T +P+    L +L+ L LSDNQL +LP  I  LK LKSL L  N+L  LP
Sbjct: 303 KVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILP 362

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            E+  L    E L++L L NN+L+TLP EI  LK L  L L +N L
Sbjct: 363 KEVGQL----ENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQL 404



 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 111/294 (37%), Positives = 148/294 (50%), Gaps = 38/294 (12%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPN--------NDYNKKPENIDTL----LLY--HNN 67
           + ++ LD S   L  +TL  +I  L N        N     P+ I+ L    LLY   N 
Sbjct: 47  LEVRVLDLSRQEL--KTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR 104

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           L+  P+   +  NL+ LDL +N++T LPQ I     L  L  R+N LT  +LP ++  LK
Sbjct: 105 LTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLT--TLPNEIEQLK 162

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL+V +L  NQL   P +I  +  L+ LYL +N L  +P EI +L  L VL LG N LT 
Sbjct: 163 NLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTV 222

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS-- 244
           +P     L  L+ L L  N+L +L   I  L+ LKSL L NN+L TLP EI  LK L   
Sbjct: 223 LPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSL 282

Query: 245 -----------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                            + LK L L+NN++  LP EI  LK L  L L DN L+
Sbjct: 283 YLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLI 336



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 92/228 (40%), Positives = 128/228 (56%), Gaps = 7/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P+   +  NL+ LDL +N++T LPQ I     L  L  R+N LT
Sbjct: 139 KNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLT 198

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  LKNL+V +L  NQL   P +I  +  L+ LYL +N L  + ++I +L  L
Sbjct: 199 --TLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNL 256

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P+    L  L++L LS+NQ  + P  I  L+ LK L L+NN++  LP
Sbjct: 257 KSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILP 316

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            EI  LK    KL+ L L +N+L TLP EI  LK L  L L  N L I
Sbjct: 317 NEIAKLK----KLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTI 360



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/224 (41%), Positives = 126/224 (56%), Gaps = 7/224 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L+ N L+    +  +  NL+SLDLSNN++T LP  I     L +L    N   
Sbjct: 231 KNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN--Q 288

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+NLKV  L+ NQ+   P +I  +  L+YLYL +N L  +P+EI +L  L
Sbjct: 289 FATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNL 348

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L+ L L +NQL++LP  I  LK L++L L NN+L TLP
Sbjct: 349 KSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTTLP 408

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  L    + L  L L  N+L TLP EI  LK L  L L +N
Sbjct: 409 QEIGQL----QNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 448



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/246 (38%), Positives = 123/246 (50%), Gaps = 22/246 (8%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           + P  +  L L    L   P    +  NL+ L L  N++T LPQ I     L  L  R+N
Sbjct: 44  QNPLEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSN 103

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  +LP ++  LKNL+V +L  NQL   P +I  +  L+ LYL +N L  +P EI +L
Sbjct: 104 RLT--TLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQL 161

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L VL LG N LT +P     L  L+ L L  N+L +LP  I  LK L+ L L +N+L 
Sbjct: 162 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLT 221

Query: 232 TLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSE 272
            LP EI  LK L                    + LKSL L NN+L TLP EI  LK L  
Sbjct: 222 VLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKS 281

Query: 273 LSLRDN 278
           L L +N
Sbjct: 282 LYLSEN 287



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 120/228 (52%), Gaps = 16/228 (7%)

Query: 3   YNYGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLL 62
           Y + +  ++ S D +  +  ++K+LD S + L   TL  +IE L         +N+ +L 
Sbjct: 237 YLHSNRLTTLSKDIEQLQ--NLKSLDLSNNQLT--TLPNEIEQL---------KNLKSLY 283

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L  N  + FP    +  NL+ L L+NN+IT LP  I     L  L   +N L   +LPK+
Sbjct: 284 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLI--TLPKE 341

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  LKNLK  +LS NQL   P ++  +  L+ L L NN L  +P+EI +L  L  L L  
Sbjct: 342 IEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSN 401

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           N LT +P   G L  L  L L  NQL +LP  I  LK L++L L+NN+
Sbjct: 402 NQLTTLPQEIGQLQNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQ 449



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/167 (41%), Positives = 92/167 (55%), Gaps = 4/167 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++LP ++  LKNL+   L  NQL   P +I  +  L+ LYL +N L  +P EI +L  L 
Sbjct: 60  KTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQ 119

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           VL LG N LT +P     L  L+ L L  N+L +LP  I  LK L+ L L +N+L  LP 
Sbjct: 120 VLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQ 179

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           EI  LK     L+ L L +N+L TLP EI  LK L  L L  N L +
Sbjct: 180 EIEQLK----NLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTV 222



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/198 (38%), Positives = 102/198 (51%), Gaps = 6/198 (3%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N   ++V +LS  +L+  PI+I  +  L+ LYL  N L  +P+EI +L  
Sbjct: 35  TYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKN 94

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P+    L  L+ L L  NQL  LP  I  LK L+ L L +N+L TL
Sbjct: 95  LQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTL 154

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPP 293
           P EI  LK     L+ L L +N+L  LP EI  LK L  L LR N L          K  
Sbjct: 155 PNEIEQLK----NLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQLKNL 210

Query: 294 SLLELASRTLKV--HEID 309
            +L+L S  L V   EI+
Sbjct: 211 QVLDLGSNQLTVLPQEIE 228


>gi|421136056|ref|ZP_15596167.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019790|gb|EKO86604.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
          Length = 424

 Score =  132 bits (331), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 97/226 (42%), Positives = 128/226 (56%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P+   +  NL+ LDL +N++T LPQ I     L  L   +N LT
Sbjct: 139 KNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLT 198

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +L KD+  L+NLK  +LS NQL   P +I  +  LK LYL  N     P+EI +L  L
Sbjct: 199 --TLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNL 256

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N +T +P+    L +L+ L LSDNQL +LP  I  LK LKSL L  N+L  LP
Sbjct: 257 KVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILP 316

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            E+  L    E L++L L NN+L+TLP EI  LK L  L L +N L
Sbjct: 317 KEVGQL----ENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQL 358



 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 105/276 (38%), Positives = 146/276 (52%), Gaps = 23/276 (8%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPN--------NDYNKKPENIDTL----LLY--HNN 67
           + ++ LD S   L  +TL  +I  L N        N     P+ I+ L    LLY   N 
Sbjct: 47  LEVRVLDLSRQEL--KTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR 104

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           L+  P+   +  NL+ LDL +N++T LPQ I     L  L  R+N LT  +LP ++  LK
Sbjct: 105 LTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLT--TLPNEIEQLK 162

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL+V +L  NQL   P +I  +  L+ LYL +N L  + ++I +L  L  L L  N LT 
Sbjct: 163 NLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTT 222

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P+    L  L++L LS+NQ  + P  I  L+ LK L L+NN++  LP EI  LK    K
Sbjct: 223 LPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLK----K 278

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           L+ L L +N+L TLP EI  LK L  L L  N L I
Sbjct: 279 LQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTI 314



 Score =  125 bits (315), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/224 (41%), Positives = 126/224 (56%), Gaps = 7/224 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L+ N L+    +  +  NL+SLDLSNN++T LP  I     L +L    N   
Sbjct: 185 KNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN--Q 242

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+NLKV  L+ NQ+   P +I  +  L+YLYL +N L  +P+EI +L  L
Sbjct: 243 FATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNL 302

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L+ L L +NQL++LP  I  LK L++L L NN+L TLP
Sbjct: 303 KSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTTLP 362

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  L    + L  L L  N+L TLP EI  LK L  L L +N
Sbjct: 363 QEIGQL----QNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 402



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 96/249 (38%), Positives = 125/249 (50%), Gaps = 22/249 (8%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           + P  +  L L    L   P    +  NL+ L L  N++T LPQ I     L  L  R+N
Sbjct: 44  QNPLEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSN 103

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  +LP ++  LKNL+V +L  NQL   P +I  +  L+ LYL +N L  +P EI +L
Sbjct: 104 RLT--TLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPNEIEQL 161

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L VL LG N LT +P     L  L+ L L  N+L +L   I  L+ LKSL L NN+L 
Sbjct: 162 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 221

Query: 232 TLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSE 272
           TLP EI  LK L                    + LK L L+NN++  LP EI  LK L  
Sbjct: 222 TLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQY 281

Query: 273 LSLRDNPLV 281
           L L DN L+
Sbjct: 282 LYLSDNQLI 290



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 120/228 (52%), Gaps = 16/228 (7%)

Query: 3   YNYGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLL 62
           Y + +  ++ S D +  +  ++K+LD S + L   TL  +IE L         +N+ +L 
Sbjct: 191 YLHSNRLTTLSKDIEQLQ--NLKSLDLSNNQLT--TLPNEIEQL---------KNLKSLY 237

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L  N  + FP    +  NL+ L L+NN+IT LP  I     L  L   +N L   +LPK+
Sbjct: 238 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLI--TLPKE 295

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  LKNLK  +LS NQL   P ++  +  L+ L L NN L  +P+EI +L  L  L L  
Sbjct: 296 IEQLKNLKSLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSN 355

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           N LT +P   G L  L  L L  NQL +LP  I  LK L++L L+NN+
Sbjct: 356 NQLTTLPQEIGQLQNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQ 403



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 90/167 (53%), Gaps = 4/167 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N   ++V +LS  +L+  PI+I  +  L+ LYL  N L  +P+EI +L  
Sbjct: 35  TYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKN 94

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P+    L  L+ L L  NQL  LP  I  LK L+ L L +N+L TL
Sbjct: 95  LQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTL 154

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P EI  LK     L+ L L +N+L  LP EI  LK L  L L  N L
Sbjct: 155 PNEIEQLK----NLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRL 197


>gi|359683929|ref|ZP_09253930.1| hypothetical protein Lsan2_04281 [Leptospira santarosai str.
           2000030832]
          Length = 504

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/211 (41%), Positives = 126/211 (59%), Gaps = 7/211 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSN 124
           N L+  P       NL+ L+L++N+ T LP+ I N   L TL   +N LT  +LPK++ N
Sbjct: 115 NKLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLSHNRLT--TLPKEIGN 172

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ L+  +L+ NQL+  P +I  +  L+ L+LGNN L  +P+EI KL KL  L LG N L
Sbjct: 173 LQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIEKLQKLEALHLGNNEL 232

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T +P   G+L  L+ L L+ NQ  +LP  I NL+ L+ L L +++L TLP EI  L+ L 
Sbjct: 233 TTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQ 292

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
           E    L L++N+  TLP EI  L+ L +L L
Sbjct: 293 E----LNLNSNQFTTLPEEIGNLQKLQKLDL 319



 Score =  127 bits (319), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 88/227 (38%), Positives = 135/227 (59%), Gaps = 9/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLL 113
           +N+  L L  N  +  P+       L++LDLS+NR+T LP+ I N   L TL +A+N L 
Sbjct: 128 QNLQELNLNSNQFTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQKLQTLDLAQNQL- 186

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
             ++LPK++  L+ L+  +L  N+L   P +I  +  L+ L+LGNN L  +P+EI  L  
Sbjct: 187 --KTLPKEIEKLQKLEALHLGNNELTTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQN 244

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N  T +P+  G+L +L+ L L+ ++L +LP  I NL+ L+ L L++N+  TL
Sbjct: 245 LQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTL 304

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P EI  L    +KL+ L L+ ++L TLP EI  L+ L +LSL  N L
Sbjct: 305 PEEIGNL----QKLQKLDLNYSQLTTLPKEIGKLQKLQKLSLAQNQL 347



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 98/259 (37%), Positives = 140/259 (54%), Gaps = 18/259 (6%)

Query: 24  IKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRS 83
           ++TLD S++ L   TL  +I  L         + + TL L  N L   P    K   L +
Sbjct: 153 LQTLDLSHNRLT--TLPKEIGNL---------QKLQTLDLAQNQLKTLPKEIEKLQKLEA 201

Query: 84  LDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
           L L NN +T LP+ I     L  L   NN LT  +LPK++ NL+NL+  NL+ NQ    P
Sbjct: 202 LHLGNNELTTLPKEIEKLQKLEALHLGNNELT--TLPKEIGNLQNLQELNLNSNQFTTLP 259

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
            +I ++  L+ L L ++ L  +P+EI  L  L  L+L  N  T +P+  G+L +L+ L L
Sbjct: 260 EEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLDL 319

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
           + +QL +LP  I  L+ L+ L L  N+L+TLP EI  L    + LK+L L +N+L TLP 
Sbjct: 320 NYSQLTTLPKEIGKLQKLQKLSLAQNQLKTLPKEIGKL----QNLKNLSLSHNELTTLPK 375

Query: 263 EIITLKCLSELSLRDNPLV 281
           EI  L+ L EL L  N L 
Sbjct: 376 EIGNLQNLKELDLGGNQLT 394



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/240 (38%), Positives = 134/240 (55%), Gaps = 13/240 (5%)

Query: 49  NDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF- 101
           N +   PE I  L       L H+ L+  P       NL+ L+L++N+ T LP+ I N  
Sbjct: 253 NQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQ 312

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L  L    + LT  +LPK++  L+ L+  +L+ NQL+  P +I  +  LK L L +N L
Sbjct: 313 KLQKLDLNYSQLT--TLPKEIGKLQKLQKLSLAQNQLKTLPKEIGKLQNLKNLSLSHNEL 370

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +P+EI  L  L  L LGGN LT +P+  G+L +L+ L L+ N+L++LP  I NL+ L+
Sbjct: 371 TTLPKEIGNLQNLKELDLGGNQLTTLPEKIGNLQKLQELFLAGNRLKTLPKEIGNLQNLQ 430

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +L L+NN+L TLP EI  L+     L+SL L  N L + P EI  L+ L  L L  NP +
Sbjct: 431 TLNLNNNQLTTLPKEIGNLQS----LESLNLSGNSLTSFPEEIGKLQKLKWLYLGGNPFL 486



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/145 (43%), Positives = 87/145 (60%), Gaps = 4/145 (2%)

Query: 134 SGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGD 193
            GN+L   P +I ++  L+ L L +N    +P EI  L KL  L L  N LT +P   G+
Sbjct: 113 GGNKLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGN 172

Query: 194 LYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLH 253
           L +L+ L L+ NQL++LP  I  L+ L++L L NN+L TLP EI  L    +KL++L L 
Sbjct: 173 LQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIEKL----QKLEALHLG 228

Query: 254 NNKLRTLPTEIITLKCLSELSLRDN 278
           NN+L TLP EI  L+ L EL+L  N
Sbjct: 229 NNELTTLPKEIGNLQNLQELNLNSN 253



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/125 (44%), Positives = 76/125 (60%), Gaps = 4/125 (3%)

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
           G N L  +P+EI  L  L  L+L  N  T +P+  G+L +L+ L LS N+L +LP  I N
Sbjct: 113 GGNKLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGN 172

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           L+ L++L L  N+L+TLP EI  L    +KL++L L NN+L TLP EI  L+ L  L L 
Sbjct: 173 LQKLQTLDLAQNQLKTLPKEIEKL----QKLEALHLGNNELTTLPKEIEKLQKLEALHLG 228

Query: 277 DNPLV 281
           +N L 
Sbjct: 229 NNELT 233


>gi|421091300|ref|ZP_15552074.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|409999904|gb|EKO50586.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 400

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/226 (41%), Positives = 129/226 (57%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           EN+ TL LY N L   P+   +  NL++LDLS N +T LP+ I     L  L   +N L 
Sbjct: 161 ENLQTLDLYANQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSNQL- 219

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            ++LPK++  L+NL+  +LS NQL   P +I  +  L  LYLG N L  +P+E+ +L  L
Sbjct: 220 -KTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKNLLTTLPKEVGQLKNL 278

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L  L L  NQ  +LP  I  L+ L+ L L+NN+L+TLP
Sbjct: 279 PTLDLSNNRLTTLPKEIGQLKNLRELYLGTNQFTALPKEIRQLQNLQVLFLNNNQLKTLP 338

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L    + L+ L L++N+L+TLP EI  L+ L  L L+ N L
Sbjct: 339 NEIEKL----QNLQVLDLNDNQLKTLPKEIEKLQNLQRLYLQYNQL 380



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 101/261 (38%), Positives = 140/261 (53%), Gaps = 18/261 (6%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           + ++ LD S   L  +TL  +I  L         +N+ TL L++N L+  P+   +  NL
Sbjct: 46  LDVRVLDLSEQKL--KTLPNEIGQL---------QNLQTLYLWNNQLTTLPNEIGQLKNL 94

Query: 82  RSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           ++L+L  N++T LP  I     L TL   +N L    LPK+++ L+NL+V  LS NQL+ 
Sbjct: 95  QTLNLDTNQLTTLPNEIGQLINLQTLDLIHNQLVI--LPKEINQLQNLRVLGLSNNQLKI 152

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +I  +  L+ L L  N L  +P EI +L  L  L L  N LT +P   G L  L  L
Sbjct: 153 LPKEIGQLENLQTLDLYANQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLREL 212

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            LS NQL++LP  I  L+ L++L L +N+L TLP EI  LK L E    L L  N L TL
Sbjct: 213 YLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYE----LYLGKNLLTTL 268

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P E+  LK L  L L +N L 
Sbjct: 269 PKEVGQLKNLPTLDLSNNRLT 289



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/230 (40%), Positives = 122/230 (53%), Gaps = 7/230 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K P ++  L L    L   P+   +  NL++L L NN++T LP  I     L TL    N
Sbjct: 43  KNPLDVRVLDLSEQKLKTLPNEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTLNLDTN 102

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  +LP ++  L NL+  +L  NQL   P +I  +  L+ L L NN L  +P+EI +L
Sbjct: 103 QLT--TLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEIGQL 160

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L L  N L  +P+  G L  L+ L LS N L  LP  I  LK L+ L L +N+L+
Sbjct: 161 ENLQTLDLYANQLKALPNEIGQLKNLQTLDLSKNILTILPKEIGQLKNLRELYLSSNQLK 220

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           TLP EI  L    E L++L L +N+L TLP EI  LK L EL L  N L 
Sbjct: 221 TLPKEIGQL----ENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKNLLT 266



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 100/184 (54%), Gaps = 3/184 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L   P    +  NL++L LS+N++T LP  I     L  L    NLLT
Sbjct: 207 KNLRELYLSSNQLKTLPKEIGQLENLQTLHLSDNQLTTLPNEIGQLKNLYELYLGKNLLT 266

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  LKNL   +LS N+L   P +I  +  L+ LYLG N    +P+EI +L  L
Sbjct: 267 --TLPKEVGQLKNLPTLDLSNNRLTTLPKEIGQLKNLRELYLGTNQFTALPKEIRQLQNL 324

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N L  +P+    L  L+ L L+DNQL++LP  I  L+ L+ L L  N+L +  
Sbjct: 325 QVLFLNNNQLKTLPNEIEKLQNLQVLDLNDNQLKTLPKEIEKLQNLQRLYLQYNQLSSEE 384

Query: 235 TEII 238
            E I
Sbjct: 385 KERI 388



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 94/165 (56%), Gaps = 4/165 (2%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           L K + N  +++V +LS  +L+  P +I  +  L+ LYL NN L  +P EI +L  L  L
Sbjct: 38  LTKALKNPLDVRVLDLSEQKLKTLPNEIGQLQNLQTLYLWNNQLTTLPNEIGQLKNLQTL 97

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
           +L  N LT +P+  G L  L+ L L  NQL  LP  I+ L+ L+ L L NN+L+ LP EI
Sbjct: 98  NLDTNQLTTLPNEIGQLINLQTLDLIHNQLVILPKEINQLQNLRVLGLSNNQLKILPKEI 157

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
             L    E L++L L+ N+L+ LP EI  LK L  L L  N L I
Sbjct: 158 GQL----ENLQTLDLYANQLKALPNEIGQLKNLQTLDLSKNILTI 198



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 41/98 (41%), Positives = 55/98 (56%), Gaps = 4/98 (4%)

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           TD+     +   +  L LS+ +L++LP  I  L+ L++L L NN+L TLP EI  LK   
Sbjct: 36  TDLTKALKNPLDVRVLDLSEQKLKTLPNEIGQLQNLQTLYLWNNQLTTLPNEIGQLK--- 92

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
             L++L L  N+L TLP EI  L  L  L L  N LVI
Sbjct: 93  -NLQTLNLDTNQLTTLPNEIGQLINLQTLDLIHNQLVI 129


>gi|24216019|ref|NP_713500.1| hypothetical protein LA_3320 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075100|ref|YP_005989419.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24197247|gb|AAN50518.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458891|gb|AER03436.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 377

 Score =  132 bits (331), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 96/228 (42%), Positives = 129/228 (56%), Gaps = 7/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P+   +  NL+ LDL +N++T LPQ I     L  L   +N LT
Sbjct: 92  KNLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLT 151

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +L KD+  L+NLK  +LS NQL   P +I  +  LK LYL  N     P+EI +L  L
Sbjct: 152 --TLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNL 209

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N +T +P+    L +L+ L LSDNQL +LP  I  LK L++L L  N+L  LP
Sbjct: 210 KVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILP 269

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            E+  L    E L++L L NN+L+TLP EI  LK L  L L +N L I
Sbjct: 270 KEVGQL----ENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLNNNQLTI 313



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/224 (41%), Positives = 126/224 (56%), Gaps = 7/224 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L+ N L+    +  +  NL+SLDLSNN++T LP  I     L +L    N   
Sbjct: 138 KNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFA 197

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+NLKV  L+ NQ+   P +I  +  L+YLYL +N L  +P+EI +L  L
Sbjct: 198 --TFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNL 255

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L+ L L +NQL++LP  I  LK L++L L+NN+L  LP
Sbjct: 256 QTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLNNNQLTILP 315

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK L      L L  N+L TLP EI  LK L  L L +N
Sbjct: 316 QEIGKLKNLL----WLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 355



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/229 (39%), Positives = 122/229 (53%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P  +  L L    L   P    K  NL+ L L  N++T LPQ I     L  L  R+N L
Sbjct: 45  PLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 104

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +LP ++  LKNL+V +L  NQL   P +I  +  L+ LYL +N L  + ++I +L  
Sbjct: 105 T--TLPNEIEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQN 162

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P+    L  L++L LS+NQ  + P  I  L+ LK L L+NN++  L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK    KL+ L L +N+L TLP EI  LK L  L L  N L I
Sbjct: 223 PNEIAKLK----KLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTI 267



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/228 (35%), Positives = 120/228 (52%), Gaps = 16/228 (7%)

Query: 3   YNYGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLL 62
           Y + +  ++ S D +  +  ++K+LD S + L   TL  +IE L         +N+ +L 
Sbjct: 144 YLHSNRLTTLSKDIEQLQ--NLKSLDLSNNQLT--TLPNEIEQL---------KNLKSLY 190

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L  N  + FP    +  NL+ L L+NN+IT LP  I     L  L   +N L   +LPK+
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLI--TLPKE 248

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  LKNL+  +LS NQL   P ++  +  L+ L L NN L  +P+EI +L  L  L L  
Sbjct: 249 IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLNN 308

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           N LT +P   G L  L  L L  NQL +LP  I  LK L++L L+NN+
Sbjct: 309 NQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQ 356



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 92/165 (55%), Gaps = 4/165 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N   ++V +LS  +L+  PI+I  +  L+ LYL  N L  +P+EI +L  
Sbjct: 34  TYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P+    L  L+ L L  NQL  LP  I  LK L+ L LH+N+L TL
Sbjct: 94  LQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTILPQEIEQLKNLQLLYLHSNRLTTL 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             +I  L    + LKSL L NN+L TLP EI  LK L  L L +N
Sbjct: 154 SKDIEQL----QNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/102 (42%), Positives = 54/102 (52%), Gaps = 11/102 (10%)

Query: 188 PDTFGDL-------YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           P T+ DL        ++  L LS  +L++LP  I  LK L+ L LH N+L  LP EI  L
Sbjct: 32  PGTYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQL 91

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           K     L+ L L +N+L TLP EI  LK L  L L  N L I
Sbjct: 92  K----NLQLLYLRSNRLTTLPNEIEQLKNLQVLDLGSNQLTI 129


>gi|418728131|ref|ZP_13286711.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777176|gb|EKR57144.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 377

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/228 (42%), Positives = 128/228 (56%), Gaps = 7/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +  NL+ LDL +N++T LPQ I     L  L   +N LT
Sbjct: 92  KNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLT 151

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +L KD+  L+NLK  +LS NQL   P +I  +  LK LYL  N     P+EI +L  L
Sbjct: 152 --TLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNL 209

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N +T +P+    L +L+ L LSDNQL +LP  I  LK L++L L  N+L  LP
Sbjct: 210 KVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILP 269

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            E+  L    E L++L L NN+L+TLP EI  LK L  L L +N L I
Sbjct: 270 KEVGQL----ENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTI 313



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/224 (41%), Positives = 125/224 (55%), Gaps = 7/224 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L+ N L+    +  +  NL+SLDLSNN++T LP  I     L +L    N   
Sbjct: 138 KNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFA 197

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+NLKV  L+ NQ+   P +I  +  L+YLYL +N L  +P+EI +L  L
Sbjct: 198 --TFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNL 255

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L+ L L +NQL++LP  I  LK L++L L NN+L  LP
Sbjct: 256 QTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILP 315

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK L      L L  N+L TLP EI  LK L  L L +N
Sbjct: 316 QEIGKLKNLL----WLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 355



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/229 (40%), Positives = 123/229 (53%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P  +  L L    L   P    K  NL+ L L  N++T LPQ I     L  L  R+N L
Sbjct: 45  PLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 104

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +LPK++  LKNL+V +L  NQL   P +I  +  L+ LYL +N L  + ++I +L  
Sbjct: 105 T--TLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQN 162

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P+    L  L++L LS+NQ  + P  I  L+ LK L L+NN++  L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK    KL+ L L +N+L TLP EI  LK L  L L  N L I
Sbjct: 223 PNEIAKLK----KLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTI 267



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/226 (42%), Positives = 123/226 (54%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +  NL+ L L +NR+T L + I     L +L   NN LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  LKNLK   LS NQ   FP +I  +  LK L+L NN +  +P EI KL KL
Sbjct: 175 --TLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKL 232

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P     L  L+ L LS NQL  LP  +  L+ L++L L NN+L+TLP
Sbjct: 233 QYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLP 292

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  LK     L++L L NN+L  LP EI  LK L  LSL  N L
Sbjct: 293 KEIEQLK----NLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQL 334



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 82/228 (35%), Positives = 120/228 (52%), Gaps = 16/228 (7%)

Query: 3   YNYGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLL 62
           Y + +  ++ S D +  +  ++K+LD S + L   TL  +IE L         +N+ +L 
Sbjct: 144 YLHSNRLTTLSKDIEQLQ--NLKSLDLSNNQLT--TLPNEIEQL---------KNLKSLY 190

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L  N  + FP    +  NL+ L L+NN+IT LP  I     L  L   +N L   +LPK+
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLI--TLPKE 248

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  LKNL+  +LS NQL   P ++  +  L+ L L NN L  +P+EI +L  L  L L  
Sbjct: 249 IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSN 308

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           N LT +P   G L  L  L L  NQL +LP  I  LK L++L L+NN+
Sbjct: 309 NQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQ 356



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 91/165 (55%), Gaps = 4/165 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N   ++V +LS  +L+  PI+I  +  L+ LYL  N L  +P+EI +L  
Sbjct: 34  TYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P     L  L+ L L  NQL  LP  I  LK L+ L LH+N+L TL
Sbjct: 94  LQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTL 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             +I  L    + LKSL L NN+L TLP EI  LK L  L L +N
Sbjct: 154 SKDIEQL----QNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 54/102 (52%), Gaps = 11/102 (10%)

Query: 188 PDTFGDL-------YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           P T+ DL        ++  L LS  +L++LP  I  LK L+ L LH N+L  LP EI  L
Sbjct: 32  PGTYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQL 91

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           K     L+ L L +N+L TLP EI  LK L  L L  N L +
Sbjct: 92  K----NLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTV 129


>gi|418694701|ref|ZP_13255735.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|409957466|gb|EKO16373.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
          Length = 425

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 128/228 (56%), Gaps = 7/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +  NL+ LDL +N++T LPQ I     L  L   +N LT
Sbjct: 94  KNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLT 153

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +L KD+  L+NLK  +LS NQL   P +I  +  LK LYL  N     P+EI +L  L
Sbjct: 154 --TLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNL 211

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N +T +P+    L +L+ L LSDNQL +LP  I  LK L++L L  N+ + +P
Sbjct: 212 KVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQFKIIP 271

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            EI  L    E L++L L NN+L+TLP EI  LK L  L L +N L I
Sbjct: 272 KEIGQL----ENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTI 315



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/226 (39%), Positives = 123/226 (54%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L+ N L+    +  +  NL+SLDLSNN++T LP  I     L +L    N   
Sbjct: 140 KNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFA 199

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+NLKV  L+ NQ+   P +I  +  L+YLYL +N L  +P+EI +L  L
Sbjct: 200 --TFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNL 257

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N    IP   G L  L+ L L +NQL++LP  I  LK L++L L NN+L  LP
Sbjct: 258 QTLDLSYNQFKIIPKEIGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILP 317

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  LK L      L L  N+L TLP EI  LK L  L+   N +
Sbjct: 318 QEIGKLKNLL----WLSLVYNQLTTLPNEIEQLKNLQVLNFGSNQI 359



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/229 (39%), Positives = 123/229 (53%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L L    L   P    +  NL+ L L  N++T LPQ I     L  L  R+N L
Sbjct: 47  PLDVRVLELSRQELKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 106

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +LPK++  LKNL+V +L  NQL   P +I  +  L+ LYL +N L  + ++I +L  
Sbjct: 107 T--TLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQN 164

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P+    L  L++L LS+NQ  + P  I  L+ LK L L+NN++  L
Sbjct: 165 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 224

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK    KL+ L L +N+L TLP EI  LK L  L L  N   I
Sbjct: 225 PNEIAKLK----KLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQFKI 269



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 103/279 (36%), Positives = 147/279 (52%), Gaps = 20/279 (7%)

Query: 3   YNYGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLL 62
           Y + +  ++ S D +  +  ++K+LD S + L   TL  +IE L         +N+ +L 
Sbjct: 146 YLHSNRLTTLSKDIEQLQ--NLKSLDLSNNQLT--TLPNEIEQL---------KNLKSLY 192

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L  N  + FP    +  NL+ L L+NN+IT LP  I     L  L   +N L   +LPK+
Sbjct: 193 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLI--TLPKE 250

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  LKNL+  +LS NQ +  P +I  +  L+ L L NN L  +P+EI +L  L  L L  
Sbjct: 251 IEQLKNLQTLDLSYNQFKIIPKEIGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSN 310

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N LT +P   G L  L  L L  NQL +LP  I  LK L+ L   +N++ TL  EI  L 
Sbjct: 311 NQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQVLNFGSNQITTLSQEIGQL- 369

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
              + LK L L+NN+L TLP EI  LK L +L L ++ L
Sbjct: 370 ---QNLKVLFLNNNQLTTLPKEIGQLKNLKKLYLNNHQL 405



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 4/111 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+     +   +  L LS  +L++LP  I  LK L+ L LH N+L 
Sbjct: 25  CEIQAEEVEPGTYKDLTKALQNPLDVRVLELSRQELKTLPIEIGQLKNLQRLYLHYNQLT 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            LP EI  LK     L+ L L +N+L TLP EI  LK L  L L  N L +
Sbjct: 85  VLPQEIEQLK----NLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTV 131


>gi|418712104|ref|ZP_13272849.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791371|gb|EKR85047.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|455791547|gb|EMF43354.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 377

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/228 (42%), Positives = 128/228 (56%), Gaps = 7/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +  NL+ LDL +N++T LPQ I     L  L   +N LT
Sbjct: 92  KNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLT 151

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +L KD+  L+NLK  +LS NQL   P +I  +  LK LYL  N     P+EI +L  L
Sbjct: 152 --TLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNL 209

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N +T +P+    L +L+ L LSDNQL +LP  I  LK L++L L  N+L  LP
Sbjct: 210 KVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILP 269

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            E+  L    E L++L L NN+L+TLP EI  LK L  L L +N L I
Sbjct: 270 KEVGQL----ENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTI 313



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/224 (41%), Positives = 125/224 (55%), Gaps = 7/224 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L+ N L+    +  +  NL+SLDLSNN++T LP  I     L +L    N   
Sbjct: 138 KNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFA 197

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+NLKV  L+ NQ+   P +I  +  L+YLYL +N L  +P+EI +L  L
Sbjct: 198 --TFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNL 255

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L+ L L +NQL++LP  I  LK L++L L NN+L  LP
Sbjct: 256 QTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILP 315

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK L      L L  N+L TLP EI  LK L  L L +N
Sbjct: 316 QEIGKLKNLL----WLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 355



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/229 (40%), Positives = 123/229 (53%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P  +  L L    L   P    K  NL+ L L  N++T LPQ I     L  L  R+N L
Sbjct: 45  PLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 104

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +LPK++  LKNL+V +L  NQL   P +I  +  L+ LYL +N L  + ++I +L  
Sbjct: 105 T--TLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQN 162

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P+    L  L++L LS+NQ  + P  I  L+ LK L L+NN++  L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK    KL+ L L +N+L TLP EI  LK L  L L  N L I
Sbjct: 223 PNEIAKLK----KLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTI 267



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/226 (42%), Positives = 123/226 (54%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +  NL+ L L +NR+T L + I     L +L   NN LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  LKNLK   LS NQ   FP +I  +  LK L+L NN +  +P EI KL KL
Sbjct: 175 --TLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKL 232

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P     L  L+ L LS NQL  LP  +  L+ L++L L NN+L+TLP
Sbjct: 233 QYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLP 292

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  LK     L++L L NN+L  LP EI  LK L  LSL  N L
Sbjct: 293 KEIEQLK----NLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQL 334



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 123/237 (51%), Gaps = 16/237 (6%)

Query: 3   YNYGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLL 62
           Y + +  ++ S D +  +  ++K+LD S + L   TL  +IE L         +N+ +L 
Sbjct: 144 YLHSNRLTTLSKDIEQLQ--NLKSLDLSNNQLT--TLPNEIEQL---------KNLKSLY 190

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L  N  + FP    +  NL+ L L+NN+IT LP  I     L  L   +N L   +LPK+
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLI--TLPKE 248

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  LKNL+  +LS NQL   P ++  +  L+ L L NN L  +P+EI +L  L  L L  
Sbjct: 249 IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSN 308

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           N LT +P   G L  L  L L  NQL +LP  I  LK L++L L+NN+  +   E I
Sbjct: 309 NQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQFSSQEKEKI 365



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 91/165 (55%), Gaps = 4/165 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N   ++V +LS  +L+  PI+I  +  L+ LYL  N L  +P+EI +L  
Sbjct: 34  TYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P     L  L+ L L  NQL  LP  I  LK L+ L LH+N+L TL
Sbjct: 94  LQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTL 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             +I  L    + LKSL L NN+L TLP EI  LK L  L L +N
Sbjct: 154 SKDIEQL----QNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 54/102 (52%), Gaps = 11/102 (10%)

Query: 188 PDTFGDL-------YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           P T+ DL        ++  L LS  +L++LP  I  LK L+ L LH N+L  LP EI  L
Sbjct: 32  PGTYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQL 91

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           K     L+ L L +N+L TLP EI  LK L  L L  N L +
Sbjct: 92  K----NLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTV 129


>gi|418728092|ref|ZP_13286672.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410777137|gb|EKR57105.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 423

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/231 (41%), Positives = 124/231 (53%), Gaps = 7/231 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K EN+  L LY + L+  P    K  NL  LDLS+N++T LP+ I     L   +  NN 
Sbjct: 182 KLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQ 241

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT   LPK++  L+NL    L  NQL   P +I  +  L+   L NN    +P+EI +L 
Sbjct: 242 LTI--LPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQ 299

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N LT  P   G L +L+ L L +NQL +LP  I  LK LK+L L  N+L+T
Sbjct: 300 NLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKT 359

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
           +P EI  L    + LKSL L NN+L  LP EI  LK L EL L +N   I 
Sbjct: 360 IPQEIGQL----QNLKSLDLRNNQLTILPKEIGQLKNLQELYLNNNQFSIE 406



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/228 (40%), Positives = 125/228 (54%), Gaps = 7/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L +N L+  P    K  NL+ L L  +++T LPQ I     L  L   +N LT
Sbjct: 161 QNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLT 220

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+ F L  NQL   P +I  +  L  LYLG+N L  +P+EI +L  L
Sbjct: 221 I--LPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNL 278

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
               L  N  T +P   G L  L+ L LS NQL + P  I  L+ L++L L NN+L TLP
Sbjct: 279 QRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLP 338

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            EI  LK     LK+L L  N+L+T+P EI  L+ L  L LR+N L I
Sbjct: 339 EEIEQLK----NLKTLNLSENQLKTIPQEIGQLQNLKSLDLRNNQLTI 382



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/229 (40%), Positives = 124/229 (54%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L+L    L+  P    +  NL+ LDL +N++T LP+ I     L  LI   N L
Sbjct: 45  PLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQL 104

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA  LPK++  LKNLKV  L+ NQL   P +I  +  L+ L LGNN L  +P+EI +L  
Sbjct: 105 TA--LPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQN 162

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P   G L  L+ L L ++QL  LP  I  L+ L  L L +N+L  L
Sbjct: 163 LQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTIL 222

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  L    + L+  +L NN+L  LP EI  L+ L EL L  N L I
Sbjct: 223 PKEIGQL----QNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTI 267



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/229 (39%), Positives = 125/229 (54%), Gaps = 7/229 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           ++ +N+  L L +N L+  P    +  NL+ L LS N++T LP+ I     L  L    +
Sbjct: 135 RQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYES 194

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT   LP+++  L+NL   +LS NQL   P +I  +  L+   L NN L  +P+EI KL
Sbjct: 195 QLTI--LPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKL 252

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             LH L LG N LT +P   G L  L+  +L +NQ   LP  I  L+ L+ L L  N+L 
Sbjct: 253 QNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLT 312

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           T P EI  L    +KL++L L NN+L TLP EI  LK L  L+L +N L
Sbjct: 313 TFPKEIGKL----QKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQL 357



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/227 (39%), Positives = 121/227 (53%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L+LY+N L+  P    +  NL+ L L+NN++T LP  I     L  L   NN LT
Sbjct: 92  KNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLT 151

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+   LS NQL   P +I  +  L+ L L  + L  +P+EI KL  L
Sbjct: 152 I--LPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNL 209

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
           H L L  N LT +P   G L  L+  +L +NQL  LP  I  L+ L  L L +N+L  LP
Sbjct: 210 HELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILP 269

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L    + L+  +L NN+   LP EI  L+ L EL L  N L 
Sbjct: 270 KEIGQL----QNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLT 312



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/202 (38%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T + L K + N  +++V  LS  +L   P +I  +  LK L LG+N L  +P+EI +L  
Sbjct: 34  TYQDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P   G L  L+ L L++NQL +LP  I  LK L+ L L NN+L  L
Sbjct: 94  LQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTIL 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPP 293
           P EI  L+ L E    L L  N+L TLP EI  L+ L  LSL        + S +T  P 
Sbjct: 154 PKEIGQLQNLQE----LYLSYNQLTTLPKEIGKLENLQLLSL--------YESQLTILPQ 201

Query: 294 SLLELASRTLKVHEIDYSQEHL 315
            + +L +    +HE+D S   L
Sbjct: 202 EIGKLQN----LHELDLSHNQL 219



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 9/126 (7%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLL 113
           +N+  L L +N L+ FP    K   L++L+L NN++T LP+ I     L TL ++ N L 
Sbjct: 299 QNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQL- 357

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INKL- 171
             +++P+++  L+NLK  +L  NQL   P +I  +  L+ LYL NN  +   +E I KL 
Sbjct: 358 --KTIPQEIGQLQNLKSLDLRNNQLTILPKEIGQLKNLQELYLNNNQFSIEEKERIRKLL 415

Query: 172 --CKLH 175
             C+++
Sbjct: 416 PKCQIY 421


>gi|45656722|ref|YP_000808.1| hypothetical protein LIC10831 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421084319|ref|ZP_15545182.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102944|ref|ZP_15563546.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599958|gb|AAS69445.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367259|gb|EKP22645.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433219|gb|EKP77567.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 377

 Score =  131 bits (330), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 96/228 (42%), Positives = 128/228 (56%), Gaps = 7/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +  NL+ LDL +N++T LPQ I     L  L   +N LT
Sbjct: 92  KNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLT 151

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +L KD+  L+NLK  +LS NQL   P +I  +  LK LYL  N     P+EI +L  L
Sbjct: 152 --TLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNL 209

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N +T +P+    L +L+ L LSDNQL +LP  I  LK L++L L  N+L  LP
Sbjct: 210 KVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILP 269

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            E+  L    E L++L L NN+L+TLP EI  LK L  L L +N L I
Sbjct: 270 KEVGQL----ENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTI 313



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/224 (41%), Positives = 125/224 (55%), Gaps = 7/224 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L+ N L+    +  +  NL+SLDLSNN++T LP  I     L +L    N   
Sbjct: 138 KNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN--Q 195

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+NLKV  L+ NQ+   P +I  +  L+YLYL +N L  +P+EI +L  L
Sbjct: 196 FATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNL 255

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L+ L L +NQL++LP  I  LK L++L L NN+L  LP
Sbjct: 256 QTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILP 315

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK L      L L  N+L TLP EI  LK L  L L +N
Sbjct: 316 QEIGKLKNLL----WLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 355



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/229 (40%), Positives = 123/229 (53%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P  +  L L    L   P    K  NL+ L L  N++T LPQ I     L  L  R+N L
Sbjct: 45  PLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 104

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +LPK++  LKNL+V +L  NQL   P +I  +  L+ LYL +N L  + ++I +L  
Sbjct: 105 T--TLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQN 162

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P+    L  L++L LS+NQ  + P  I  L+ LK L L+NN++  L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK    KL+ L L +N+L TLP EI  LK L  L L  N L I
Sbjct: 223 PNEIAKLK----KLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTI 267



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/226 (42%), Positives = 123/226 (54%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +  NL+ L L +NR+T L + I     L +L   NN LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  LKNLK   LS NQ   FP +I  +  LK L+L NN +  +P EI KL KL
Sbjct: 175 --TLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKL 232

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P     L  L+ L LS NQL  LP  +  L+ L++L L NN+L+TLP
Sbjct: 233 QYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLP 292

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  LK     L++L L NN+L  LP EI  LK L  LSL  N L
Sbjct: 293 KEIEQLK----NLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQL 334



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/228 (35%), Positives = 120/228 (52%), Gaps = 16/228 (7%)

Query: 3   YNYGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLL 62
           Y + +  ++ S D +  +  ++K+LD S + L   TL  +IE L         +N+ +L 
Sbjct: 144 YLHSNRLTTLSKDIEQLQ--NLKSLDLSNNQLT--TLPNEIEQL---------KNLKSLY 190

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L  N  + FP    +  NL+ L L+NN+IT LP  I     L  L   +N L   +LPK+
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLI--TLPKE 248

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  LKNL+  +LS NQL   P ++  +  L+ L L NN L  +P+EI +L  L  L L  
Sbjct: 249 IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSN 308

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           N LT +P   G L  L  L L  NQL +LP  I  LK L++L L+NN+
Sbjct: 309 NQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQ 356



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 91/165 (55%), Gaps = 4/165 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N   ++V +LS  +L+  PI+I  +  L+ LYL  N L  +P+EI +L  
Sbjct: 34  TYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P     L  L+ L L  NQL  LP  I  LK L+ L LH+N+L TL
Sbjct: 94  LQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTL 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             +I  L    + LKSL L NN+L TLP EI  LK L  L L +N
Sbjct: 154 SKDIEQL----QNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 54/102 (52%), Gaps = 11/102 (10%)

Query: 188 PDTFGDL-------YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           P T+ DL        ++  L LS  +L++LP  I  LK L+ L LH N+L  LP EI  L
Sbjct: 32  PGTYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQL 91

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           K     L+ L L +N+L TLP EI  LK L  L L  N L +
Sbjct: 92  K----NLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTV 129


>gi|418727618|ref|ZP_13286206.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409958976|gb|EKO22753.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 377

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 96/228 (42%), Positives = 128/228 (56%), Gaps = 7/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +  NL+ LDL +N++T LPQ I     L  L   +N LT
Sbjct: 92  KNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLT 151

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +L KD+  L+NLK  +LS NQL   P +I  +  LK LYL  N     P+EI +L  L
Sbjct: 152 --TLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNL 209

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N +T +P+    L +L+ L LSDNQL +LP  I  LK L++L L  N+L  LP
Sbjct: 210 KVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILP 269

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            E+  L    E L++L L NN+L+TLP EI  LK L  L L +N L I
Sbjct: 270 KEVGQL----ENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTI 313



 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 93/226 (41%), Positives = 126/226 (55%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L+ N L+    +  +  NL+SLDLSNN++T LP  I     L +L    N   
Sbjct: 138 KNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFA 197

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+NLKV  L+ NQ+   P +I  +  L+YLYL +N L  +P+EI +L  L
Sbjct: 198 --TFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNL 255

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L+ L L +NQL++LP  I  LK L++L L NN+L  LP
Sbjct: 256 QTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILP 315

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  LK L      L L  N+L TLP EI  LK L  L L +N L
Sbjct: 316 QEIGKLKNLL----WLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQL 357



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/229 (40%), Positives = 124/229 (54%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L L    L   P    K  NL+ L L  N++T LPQ I     L  L  R+N L
Sbjct: 45  PLDVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 104

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +LPK++  LKNL+V +L  NQL   P +I  +  L+ LYL +N L  + ++I +L  
Sbjct: 105 T--TLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQN 162

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P+    L  L++L LS+NQ  + P  I  L+ LK L L+NN++  L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK    KL+ L L +N+L TLP EI  LK L  L L  N L I
Sbjct: 223 PNEIAKLK----KLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTI 267



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 93/165 (56%), Gaps = 4/165 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T + L K + N  +++V +LS  +L+  PI+I  +  L+ LYL  N L  +P+EI +L  
Sbjct: 34  TYQDLTKALQNPLDVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P     L  L+ L L  NQL  LP  I  LK L+ L LH+N+L TL
Sbjct: 94  LQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTL 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             +I  L    + LKSL L NN+L TLP EI  LK L  L L +N
Sbjct: 154 SKDIEQL----QNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 75/222 (33%), Positives = 116/222 (52%), Gaps = 21/222 (9%)

Query: 3   YNYGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPN--------NDYNKK 54
           Y + +  ++ S D +  +  ++K+LD S + L   TL  +IE L N        N +   
Sbjct: 144 YLHSNRLTTLSKDIEQLQ--NLKSLDLSNNQLT--TLPNEIEQLKNLKSLYLSENQFATF 199

Query: 55  P------ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLI 107
           P      +N+  L L +N ++  P+  +K   L+ L LS+N++  LP+ I     L TL 
Sbjct: 200 PKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLD 259

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE 167
              N LT   LPK++  L+NL+  +L  NQL+  P +I  +  L+ L+L NN L  +P+E
Sbjct: 260 LSYNQLTI--LPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILPQE 317

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
           I KL  L  LSL  N LT +P+    L  L+ L L++NQL S
Sbjct: 318 IGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQLSS 359



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 54/102 (52%), Gaps = 11/102 (10%)

Query: 188 PDTFGDLYQ-------LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           P T+ DL +       +  L LS  +L++LP  I  LK L+ L LH N+L  LP EI  L
Sbjct: 32  PGTYQDLTKALQNPLDVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQL 91

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           K     L+ L L +N+L TLP EI  LK L  L L  N L +
Sbjct: 92  K----NLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTV 129


>gi|418688840|ref|ZP_13249975.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400361998|gb|EJP17951.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 492

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 98/229 (42%), Positives = 125/229 (54%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K EN+  L LY + L+  P    K  NL  LDLS+N++T LP+ I     L  L    N 
Sbjct: 205 KLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQKLQWLYLPKNQ 264

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP+++  LKNLK  NLS NQ++  P +I  +  L+ LYL NN L  +P+EI +L 
Sbjct: 265 LT--TLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQ 322

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N LT +P   G L  L+ L L  NQL  LP  I  LK L++L L NN+L T
Sbjct: 323 NLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTT 382

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L  EI  L    + LKSL L +N+L   P EI  LK L  L L  N L 
Sbjct: 383 LSKEIEQL----QNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLT 427



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/227 (40%), Positives = 128/227 (56%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L +N L+  P    +  NL+ LDL NN++T LP+ I     L  L    N LT
Sbjct: 115 KNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLT 174

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL++ +L  +QL   P +I  +  L+ L L  + L  +P+EI KL  L
Sbjct: 175 --TLPKEIGKLENLQLLSLYESQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNL 232

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
           H L L  N LT +P   G L +L+ L L  NQL +LP  I  LK LKSL L  N+++T+P
Sbjct: 233 HELDLSHNQLTILPKEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIP 292

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L    +KL+SL L NN+L TLP EI  L+ L  L L  N L 
Sbjct: 293 KEIEKL----QKLQSLYLPNNQLTTLPQEIGQLQNLQSLDLSTNRLT 335



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/246 (38%), Positives = 128/246 (52%), Gaps = 22/246 (8%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           + P ++  L+L    L+  P    +  NL+ LDL +N++T LP+ I     L  LI   N
Sbjct: 43  QNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYN 102

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LTA  LPK++  LKNLKV  L+ NQL   P +I  +  L+ L LGNN L  +P+EI +L
Sbjct: 103 QLTA--LPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQL 160

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L L  N LT +P   G L  L+ L L ++QL +LP  I  L+ L+ L L+ ++L 
Sbjct: 161 QNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTTLPKEIGKLENLQLLSLYESQLT 220

Query: 232 TLPTEIITLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSE 272
            LP EI  L+ L E                   KL+ L L  N+L TLP EI  LK L  
Sbjct: 221 ILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKS 280

Query: 273 LSLRDN 278
           L+L  N
Sbjct: 281 LNLSYN 286



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/230 (40%), Positives = 124/230 (53%), Gaps = 7/230 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K EN+  L LY + L+  P    K  NL+ L L  +++T LPQ I     L  L   +N 
Sbjct: 182 KLENLQLLSLYESQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQ 241

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT   LPK++  L+ L+   L  NQL   P +I  +  LK L L  N +  +P+EI KL 
Sbjct: 242 LTI--LPKEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQ 299

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  L L  N LT +P   G L  L++L LS N+L +LP  I +L+ L+ L L +N+L  
Sbjct: 300 KLQSLYLPNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTI 359

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           LP EI  LK     L++L L NN+L TL  EI  L+ L  L LR N L I
Sbjct: 360 LPNEIGQLK----NLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTI 405



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/209 (38%), Positives = 116/209 (55%), Gaps = 14/209 (6%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           ++K+L+ SY+ +  +T+  +IE         K + + +L L +N L+  P    +  NL+
Sbjct: 277 NLKSLNLSYNQI--KTIPKEIE---------KLQKLQSLYLPNNQLTTLPQEIGQLQNLQ 325

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           SLDLS NR+T LPQ I +   L  L   +N LT   LP ++  LKNL+  NL  N+L   
Sbjct: 326 SLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTI--LPNEIGQLKNLQTLNLRNNRLTTL 383

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
             +I  +  LK L L +N L   P+EI +L  L VL LG N LT +P+  G L  L+ L 
Sbjct: 384 SKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLD 443

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  NQL +LP  I  L+ L+ L L+NN+L
Sbjct: 444 LDSNQLTTLPQEIGQLQNLQELFLNNNQL 472



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/219 (38%), Positives = 115/219 (52%), Gaps = 13/219 (5%)

Query: 46  LPNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           LP N     P+      N+ +L L +N +   P    K   L+SL L NN++T LPQ I 
Sbjct: 260 LPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIG 319

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L +L    N LT  +LP+++ +L+NL+   L  NQL   P +I  +  L+ L L N
Sbjct: 320 QLQNLQSLDLSTNRLT--TLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRN 377

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  + +EI +L  L  L L  N LT  P   G L  L+ L L  NQL +LP  I  LK
Sbjct: 378 NRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLK 437

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
            L++L L +N+L TLP EI  L+ L E    L L+NN+L
Sbjct: 438 NLQTLDLDSNQLTTLPQEIGQLQNLQE----LFLNNNQL 472



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/168 (41%), Positives = 94/168 (55%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T + L K + N  +++V  LS  +L   P +I  +  LK L LG+N L  +P+EI +L  
Sbjct: 34  TYQDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P   G L  L+ L L++NQL +LP  I  LK L+ L L NN+L  L
Sbjct: 94  LQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTIL 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L+ L E    L L  N+L TLP EI  L+ L  LSL ++ L 
Sbjct: 154 PKEIGQLQNLQE----LYLSYNQLTTLPKEIGKLENLQLLSLYESQLT 197


>gi|456985860|gb|EMG21570.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Copenhageni str. LT2050]
          Length = 368

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 96/228 (42%), Positives = 128/228 (56%), Gaps = 7/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +  NL+ LDL +N++T LPQ I     L  L   +N LT
Sbjct: 92  KNLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLT 151

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +L KD+  L+NLK  +LS NQL   P +I  +  LK LYL  N     P+EI +L  L
Sbjct: 152 --TLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNL 209

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N +T +P+    L +L+ L LSDNQL +LP  I  LK L++L L  N+L  LP
Sbjct: 210 KVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILP 269

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            E+  L    E L++L L NN+L+TLP EI  LK L  L L +N L I
Sbjct: 270 KEVGQL----ENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTI 313



 Score =  126 bits (317), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/224 (41%), Positives = 125/224 (55%), Gaps = 7/224 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L+ N L+    +  +  NL+SLDLSNN++T LP  I     L +L    N   
Sbjct: 138 KNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFA 197

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+NLKV  L+ NQ+   P +I  +  L+YLYL +N L  +P+EI +L  L
Sbjct: 198 --TFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNL 255

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L+ L L +NQL++LP  I  LK L++L L NN+L  LP
Sbjct: 256 QTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSNNQLTILP 315

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK L      L L  N+L TLP EI  LK L  L L +N
Sbjct: 316 QEIGKLKNLL----WLSLVYNQLTTLPNEIEQLKNLQTLYLNNN 355



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/229 (40%), Positives = 123/229 (53%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P  +  L L    L   P    K  NL+ L L  N++T LPQ I     L  L  R+N L
Sbjct: 45  PLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 104

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +LPK++  LKNL+V +L  NQL   P +I  +  L+ LYL +N L  + ++I +L  
Sbjct: 105 T--TLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQN 162

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P+    L  L++L LS+NQ  + P  I  L+ LK L L+NN++  L
Sbjct: 163 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITIL 222

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK    KL+ L L +N+L TLP EI  LK L  L L  N L I
Sbjct: 223 PNEIAKLK----KLQYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTI 267



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/226 (42%), Positives = 123/226 (54%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +  NL+ L L +NR+T L + I     L +L   NN LT
Sbjct: 115 KNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTLSKDIEQLQNLKSLDLSNNQLT 174

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  LKNLK   LS NQ   FP +I  +  LK L+L NN +  +P EI KL KL
Sbjct: 175 --TLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKL 232

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P     L  L+ L LS NQL  LP  +  L+ L++L L NN+L+TLP
Sbjct: 233 QYLYLSDNQLITLPKEIEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLP 292

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  LK     L++L L NN+L  LP EI  LK L  LSL  N L
Sbjct: 293 KEIEQLK----NLQTLFLSNNQLTILPQEIGKLKNLLWLSLVYNQL 334



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/228 (35%), Positives = 120/228 (52%), Gaps = 16/228 (7%)

Query: 3   YNYGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLL 62
           Y + +  ++ S D +  +  ++K+LD S + L   TL  +IE L         +N+ +L 
Sbjct: 144 YLHSNRLTTLSKDIEQLQ--NLKSLDLSNNQLT--TLPNEIEQL---------KNLKSLY 190

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L  N  + FP    +  NL+ L L+NN+IT LP  I     L  L   +N L   +LPK+
Sbjct: 191 LSENQFATFPKEIGQLQNLKVLFLNNNQITILPNEIAKLKKLQYLYLSDNQLI--TLPKE 248

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  LKNL+  +LS NQL   P ++  +  L+ L L NN L  +P+EI +L  L  L L  
Sbjct: 249 IEQLKNLQTLDLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLKNLQTLFLSN 308

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           N LT +P   G L  L  L L  NQL +LP  I  LK L++L L+NN+
Sbjct: 309 NQLTILPQEIGKLKNLLWLSLVYNQLTTLPNEIEQLKNLQTLYLNNNQ 356



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 91/165 (55%), Gaps = 4/165 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N   ++V +LS  +L+  PI+I  +  L+ LYL  N L  +P+EI +L  
Sbjct: 34  TYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQLKN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P     L  L+ L L  NQL  LP  I  LK L+ L LH+N+L TL
Sbjct: 94  LQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLHSNRLTTL 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             +I  L    + LKSL L NN+L TLP EI  LK L  L L +N
Sbjct: 154 SKDIEQL----QNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 194



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 54/102 (52%), Gaps = 11/102 (10%)

Query: 188 PDTFGDL-------YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           P T+ DL        ++  L LS  +L++LP  I  LK L+ L LH N+L  LP EI  L
Sbjct: 32  PGTYRDLTKALQNPLEVRVLDLSRQELKTLPIEIGKLKNLQRLYLHYNQLTVLPQEIEQL 91

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           K     L+ L L +N+L TLP EI  LK L  L L  N L +
Sbjct: 92  K----NLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTV 129


>gi|359727309|ref|ZP_09266005.1| hypothetical protein Lwei2_10285 [Leptospira weilii str.
           2006001855]
          Length = 455

 Score =  131 bits (329), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 94/236 (39%), Positives = 129/236 (54%), Gaps = 10/236 (4%)

Query: 49  NDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI---TNFPLST 105
           N+  K P ++  L L +  L+ FP    KF NL+ LDLS N    LPQ I    N     
Sbjct: 44  NEALKNPTDVRVLNLSYRYLTTFPKGIEKFQNLKHLDLSENFFKTLPQEIGRLQNLQELN 103

Query: 106 LIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
           L   NN +    LP+++  L+NL+  NLSGN+L   P +I  +  L+ L L +N L  +P
Sbjct: 104 LSFNNNPI---DLPQEIGRLQNLERLNLSGNRLTTLPQEIWRLQNLQELNLSSNYLIDLP 160

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
           +EI +L  L  L+L GN LT +P   G L +LE L ++ N+L  LP  I  L+ LK LLL
Sbjct: 161 QEIGRLQNLEQLNLSGNRLTTLPQEIGQLKKLEWLHVNHNRLTVLPKEIGQLQNLKELLL 220

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           ++N L TLP EI  L    +K K L+LH N+L TLP  +  L+ L  + L  N L 
Sbjct: 221 YDNSLTTLPEEIGQL----QKFKQLVLHENQLTTLPQGLCKLQNLERIYLHQNRLT 272



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 94/257 (36%), Positives = 136/257 (52%), Gaps = 24/257 (9%)

Query: 24  IKTLDFSYSSLDSETLATQIELLPN--------NDYNKKPENIDTLL-LYHNNLSF---- 70
           ++ L+ SY  L   T    IE   N        N +   P+ I  L  L   NLSF    
Sbjct: 53  VRVLNLSYRYLT--TFPKGIEKFQNLKHLDLSENFFKTLPQEIGRLQNLQELNLSFNNNP 110

Query: 71  --FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKN 127
              P    +  NL  L+LS NR+T LPQ I     L  L   +N L    LP+++  L+N
Sbjct: 111 IDLPQEIGRLQNLERLNLSGNRLTTLPQEIWRLQNLQELNLSSNYLI--DLPQEIGRLQN 168

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           L+  NLSGN+L   P +I  +  L++L++ +N L  +P+EI +L  L  L L  NSLT +
Sbjct: 169 LEQLNLSGNRLTTLPQEIGQLKKLEWLHVNHNRLTVLPKEIGQLQNLKELLLYDNSLTTL 228

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
           P+  G L + + L+L +NQL +LP  +  L+ L+ + LH N+L +LP EI  L+ L E  
Sbjct: 229 PEEIGQLQKFKQLVLHENQLTTLPQGLCKLQNLERIYLHQNRLTSLPQEIGQLQNLQE-- 286

Query: 248 KSLLLHNNKLRTLPTEI 264
             L L +N+L+TLP EI
Sbjct: 287 --LHLSSNQLKTLPKEI 301



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 116/250 (46%), Gaps = 30/250 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L   P    +  NL  L+LS NR+T LPQ I     L  L   +N LT
Sbjct: 144 QNLQELNLSSNYLIDLPQEIGRLQNLEQLNLSGNRLTTLPQEIGQLKKLEWLHVNHNRLT 203

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NLK   L  N L   P +I  +   K L L  N L  +P+ + KL  L
Sbjct: 204 V--LPKEIGQLQNLKELLLYDNSLTTLPEEIGQLQKFKQLVLHENQLTTLPQGLCKLQNL 261

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLE-----------------------SLP 211
             + L  N LT +P   G L  L+ L LS NQL+                       +LP
Sbjct: 262 ERIYLHQNRLTSLPQEIGQLQNLQELHLSSNQLKTLPKEIEKLHNLQILNLNNNELTALP 321

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             I  L+ L  L L  NKL  LP EI  L    + ++ L L +N+L TLP+EI  LK L 
Sbjct: 322 KEIGQLQNLYGLNLKLNKLTILPKEIGQL----QNMRDLDLSDNQLTTLPSEIGQLKKLH 377

Query: 272 ELSLRDNPLV 281
            L+L  N L 
Sbjct: 378 SLNLSGNSLT 387



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 74/190 (38%), Positives = 106/190 (55%), Gaps = 3/190 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  LLLY N+L+  P+   +    + L L  N++T LPQ +     L  +    N LT
Sbjct: 213 QNLKELLLYDNSLTTLPEEIGQLQKFKQLVLHENQLTTLPQGLCKLQNLERIYLHQNRLT 272

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLP+++  L+NL+  +LS NQL+  P +I  +  L+ L L NN L  +P+EI +L  L
Sbjct: 273 --SLPQEIGQLQNLQELHLSSNQLKTLPKEIEKLHNLQILNLNNNELTALPKEIGQLQNL 330

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
           + L+L  N LT +P   G L  +  L LSDNQL +LP+ I  LK L SL L  N L + P
Sbjct: 331 YGLNLKLNKLTILPKEIGQLQNMRDLDLSDNQLTTLPSEIGQLKKLHSLNLSGNSLTSFP 390

Query: 235 TEIITLKCLS 244
            EI  L+ L 
Sbjct: 391 KEIGKLQNLK 400



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/162 (38%), Positives = 84/162 (51%), Gaps = 5/162 (3%)

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG- 180
           + N  +++V NLS   L  FP  I     LK+L L  N    +P+EI +L  L  L+L  
Sbjct: 47  LKNPTDVRVLNLSYRYLTTFPKGIEKFQNLKHLDLSENFFKTLPQEIGRLQNLQELNLSF 106

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
            N+  D+P   G L  LE L LS N+L +LP  I  L+ L+ L L +N L  LP EI  L
Sbjct: 107 NNNPIDLPQEIGRLQNLERLNLSGNRLTTLPQEIWRLQNLQELNLSSNYLIDLPQEIGRL 166

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           + L +    L L  N+L TLP EI  LK L  L +  N L +
Sbjct: 167 QNLEQ----LNLSGNRLTTLPQEIGQLKKLEWLHVNHNRLTV 204



 Score = 40.8 bits (94), Expect = 1.0,   Method: Compositional matrix adjust.
 Identities = 38/117 (32%), Positives = 51/117 (43%), Gaps = 20/117 (17%)

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           TD+ +   +   +  L LS   L + P  I   + LK L L  N  +TLP EI  L+ L 
Sbjct: 41  TDLNEALKNPTDVRVLNLSYRYLTTFPKGIEKFQNLKHLDLSENFFKTLPQEIGRLQNLQ 100

Query: 245 E--------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           E                     L+ L L  N+L TLP EI  L+ L EL+L  N L+
Sbjct: 101 ELNLSFNNNPIDLPQEIGRLQNLERLNLSGNRLTTLPQEIWRLQNLQELNLSSNYLI 157


>gi|418707299|ref|ZP_13268125.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772346|gb|EKR47534.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 400

 Score =  131 bits (329), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 95/226 (42%), Positives = 124/226 (54%), Gaps = 7/226 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K EN+  L LY + L+  P    K  NL  LDLS+N++T LP+ I     L   +  NN 
Sbjct: 159 KLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQ 218

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT   LPK++  L+NL    L  NQL   P +I  +  L+   L NN    +P+EI +L 
Sbjct: 219 LTI--LPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQ 276

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N LT  P   G L +L+ L L +NQL +LP  I  LK LK+L L  N+L+T
Sbjct: 277 NLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKT 336

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           +P EI  L    + LKSL L NN+L TLP EI  LK L  L+L +N
Sbjct: 337 IPQEIGQL----QNLKSLDLSNNQLTTLPKEIEQLKNLQTLNLWNN 378



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 94/229 (41%), Positives = 124/229 (54%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L+L    L+  P    +  NL+ LDL +N++T LP+ I     L  LI   N L
Sbjct: 45  PLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQL 104

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA  LPK++  LKNLKV  L+ NQL   P +I  +  L+ L LGNN L  +P+EI KL  
Sbjct: 105 TA--LPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLEN 162

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +LSL  + LT +P   G L  L  L LS NQL  LP  I  L+ L+  +L NN+L  L
Sbjct: 163 LQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTIL 222

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  L+ L E    L L +N+L  LP EI  L+ L    L +N   I
Sbjct: 223 PKEIGKLQNLHE----LYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTI 267



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/249 (37%), Positives = 129/249 (51%), Gaps = 30/249 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L+LY+N L+  P    +  NL+ L L+NN++T LP  I     L  L   NN LT
Sbjct: 92  KNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLT 151

Query: 115 AESLPKDMSNLKNLKV-----------------------FNLSGNQLEQFPIQILDIPTL 151
             +LPK++  L+NL++                        +LS NQL   P +I  +  L
Sbjct: 152 --TLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNL 209

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           +   L NN L  +P+EI KL  LH L LG N LT +P   G L  L+  +L +NQ   LP
Sbjct: 210 QRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILP 269

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             I  L+ L+ L L  N+L T P EI  L    +KL++L L NN+L TLP EI  LK L 
Sbjct: 270 KEIGQLQNLQELYLSYNQLTTFPKEIGKL----QKLQTLNLWNNQLTTLPEEIEQLKNLK 325

Query: 272 ELSLRDNPL 280
            L+L +N L
Sbjct: 326 TLNLSENQL 334



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 91/230 (39%), Positives = 125/230 (54%), Gaps = 7/230 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           ++ +N+  L L +N L+  P    K  NL+ L L  +++T LPQ I     L  L   +N
Sbjct: 135 RQLKNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHN 194

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT   LPK++  L+NL+ F L  NQL   P +I  +  L  LYLG+N L  +P+EI +L
Sbjct: 195 QLTI--LPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQL 252

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L    L  N  T +P   G L  L+ L LS NQL + P  I  L+ L++L L NN+L 
Sbjct: 253 QNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLT 312

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           TLP EI  LK     LK+L L  N+L+T+P EI  L+ L  L L +N L 
Sbjct: 313 TLPEEIEQLK----NLKTLNLSENQLKTIPQEIGQLQNLKSLDLSNNQLT 358



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 95/169 (56%), Gaps = 4/169 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T + L K + N  +++V  LS  +L   P +I  +  LK L LG+N L  +P+EI +L  
Sbjct: 34  TYQDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P   G L  L+ L L++NQL +LP  I  LK L+ L L NN+L TL
Sbjct: 94  LQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTL 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  L    E L+ L L+ ++L  LP EI  L+ L EL L  N L I
Sbjct: 154 PKEIGKL----ENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTI 198



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/101 (40%), Positives = 55/101 (54%), Gaps = 11/101 (10%)

Query: 188 PDTFGDLYQ-------LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           P T+ DL +       +  LILS+ +L +LP  I  L+ LK L L +N+L  LP EI  L
Sbjct: 32  PGTYQDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQL 91

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           K     L+ L+L+ N+L  LP EI  LK L  L L +N L 
Sbjct: 92  K----NLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLT 128


>gi|418712107|ref|ZP_13272852.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421116140|ref|ZP_15576529.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410012306|gb|EKO70408.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410791374|gb|EKR85050.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 358

 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 93/229 (40%), Positives = 124/229 (54%), Gaps = 7/229 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L++N L        +  NL+ L L NN++T  P+ I     L +L   NN LT
Sbjct: 119 QNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLT 178

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+NL+   LS NQL  FP +I  +  L++L LG+N L  +P EI KL KL
Sbjct: 179 --TFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKL 236

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N LT IP   G L  L+ L LS NQ +++P     LK LK L L  N+L  LP
Sbjct: 237 QELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALP 296

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
            EI  LK     LK L L  N+L T+P EI  L+ L  L LR+N   I 
Sbjct: 297 KEIGKLK----NLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQFSIE 341



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/240 (39%), Positives = 126/240 (52%), Gaps = 13/240 (5%)

Query: 49  NDYNKKPENIDTLLLYH------NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP 102
           N +   P+ I+ L   H      N L+  P    +  NL+ L+L NN++  + + I    
Sbjct: 83  NQFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLK 142

Query: 103 -LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L  L   NN LTA   PK++  L+NLK   LS NQL  FP +I  +  L+ LYL NN L
Sbjct: 143 NLQKLYLDNNQLTA--FPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQL 200

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
              P+EI KL KL  L LG N LT IP+  G L +L+ L L  NQL ++P  I  L+ L+
Sbjct: 201 TTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQ 260

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L L  N+ +T+P E   LK     LK L L  N+L  LP EI  LK L  L+L  N L+
Sbjct: 261 VLFLSYNQFKTIPVEFGQLK----NLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLI 316



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/227 (36%), Positives = 111/227 (48%), Gaps = 28/227 (12%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLT 114
           P ++  L+L    L   P+   +  NL+ LDLS+N++                       
Sbjct: 26  PLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLI---------------------- 63

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  LKNL+   L+ NQ + FP +I  + +L  LYL NN L  +P EI +L  L
Sbjct: 64  --ILPKEIRQLKNLQELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNL 121

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N L  I      L  L+ L L +NQL + P  I  L+ LKSL L NN+L T P
Sbjct: 122 QELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFP 181

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L+ L E    L L NN+L T P EI  L+ L  L L DN L 
Sbjct: 182 KEIGKLQNLQE----LYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLT 224



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/183 (36%), Positives = 88/183 (48%), Gaps = 19/183 (10%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           L K   N  +++V  LS  +L+  P +I  +  L+ L L +N L  +P+EI +L  L  L
Sbjct: 19  LTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQEL 78

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            L  N     P     L  L  L LS+NQL  LP  I  L+ L+ L L NN+L+T+  EI
Sbjct: 79  FLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEI 138

Query: 238 ITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             LK L                    + LKSL L NN+L T P EI  L+ L EL L +N
Sbjct: 139 EQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNN 198

Query: 279 PLV 281
            L 
Sbjct: 199 QLT 201



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 3/133 (2%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K + +  L L  N L+  P+   K   L+ L+L  N++T +P+ I     L  L    N 
Sbjct: 209 KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYN- 267

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
              +++P +   LKNLK+ +L  NQL   P +I  +  LK L L  N L  +P+EI +L 
Sbjct: 268 -QFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLITIPKEIGQLQ 326

Query: 173 KLHVLSLGGNSLT 185
            L  L L  N  +
Sbjct: 327 NLQTLYLRNNQFS 339



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 4/97 (4%)

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           D+   F +   +  LILS+ +L++LP  I  LK L+ L L +N+L  LP EI  LK L E
Sbjct: 18  DLTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQE 77

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
               L L+ N+ +T P EI  LK L +L L +N L I
Sbjct: 78  ----LFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTI 110



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 11/117 (9%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLP---QAITNFPLSTLIARNNLLTAESLPKDM 122
           N L+  P    +  NL+ L LS N+   +P     + N  + +L A  N LTA  LPK++
Sbjct: 244 NQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDA--NQLTA--LPKEI 299

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INKL---CKLH 175
             LKNLK+ NL  NQL   P +I  +  L+ LYL NN  +   +E I KL   C+++
Sbjct: 300 GKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQFSIEEKERIRKLLPKCQIY 356


>gi|421110794|ref|ZP_15571285.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803891|gb|EKS10018.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 558

 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 93/227 (40%), Positives = 124/227 (54%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           EN+  L +++N L   P       NL+SL+L NNR+  LP+ I     L  L   NN L 
Sbjct: 223 ENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLITLPKEIGTLQKLEWLYLTNNQLA 282

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+ L+   L+ NQL+  P +I  +  LK L L NN L   P+EI  L  L
Sbjct: 283 --TLPKEIGKLQRLEWLGLANNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLSNL 340

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N  T +P   G L++L  L L  NQL +LP  I  L+ L+ L L+NN+L TLP
Sbjct: 341 QRLHLEYNGFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLP 400

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI TL+    KL+ L L NN+L TLP EI  L+ L +L L  N L 
Sbjct: 401 KEIGTLR----KLQHLYLANNQLATLPKEIGQLQNLEDLDLEYNQLA 443



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/234 (40%), Positives = 125/234 (53%), Gaps = 7/234 (2%)

Query: 49  NDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLI 107
           N+  K P ++  L L  N L+  P    K  NL SL L NN++T LPQ I     L  L 
Sbjct: 32  NEALKNPMDVWMLDLTRNQLTVLPQEIGKLQNLFSLYLENNQLTTLPQEIETLQKLKWLY 91

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE 167
              N L   +LPK++  L+ L+   L GNQL   P +I  +  L+ L L NN L  +P+E
Sbjct: 92  LSENQLA--TLPKEIGKLQRLERLYLGGNQLTTIPQEIGALQDLEELSLYNNQLITLPQE 149

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           I  L  L  L+L  N L  +P   G L  L+ L + +NQL +LP  I  L+ LK L L  
Sbjct: 150 IGTLQDLEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRLAY 209

Query: 228 NKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           N+L TLP EI  L    E L+ L + NN+L TLP EI TL+ L  L+L +N L+
Sbjct: 210 NQLTTLPKEIGRL----ENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLI 259



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 84/213 (39%), Positives = 115/213 (53%), Gaps = 7/213 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K +N+  L+L +N L  FP      +NL+ L L  N  T LPQ I     L  L   +N 
Sbjct: 313 KLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNGFTTLPQEIGTLHRLPWLNLEHNQ 372

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP+++  L+ L+  NL  N+L   P +I  +  L++LYL NN L  +P+EI +L 
Sbjct: 373 LT--TLPQEIGRLERLEWLNLYNNRLATLPKEIGTLRKLQHLYLANNQLATLPKEIGQLQ 430

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N L  +P+  G L +LE L L +NQL +LP  I  L+ +  L L NN+LRT
Sbjct: 431 NLEDLDLEYNQLATLPEAIGTLQRLEWLSLKNNQLTTLPEEIGTLQKIVKLNLANNQLRT 490

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
           LP EI  L    + LK L L  N   T P EI+
Sbjct: 491 LPQEIGQL----QNLKDLDLSGNPFTTFPQEIV 519



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 89/227 (39%), Positives = 122/227 (53%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           ++++ L L +N L   P       +L+ L++ NN++  LPQ I     L  L    N LT
Sbjct: 154 QDLEELNLANNQLRTLPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRLAYNQLT 213

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+  N+  NQL   P +I  +  L+ L L NN L  +P+EI  L KL
Sbjct: 214 --TLPKEIGRLENLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLITLPKEIGTLQKL 271

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P   G L +LE L L++NQL+SLP  I  L+ LK L+L NN+L + P
Sbjct: 272 EWLYLTNNQLATLPKEIGKLQRLEWLGLANNQLKSLPQEIGKLQNLKELILENNRLESFP 331

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI TL      L+ L L  N   TLP EI TL  L  L+L  N L 
Sbjct: 332 KEIGTLS----NLQRLHLEYNGFTTLPQEIGTLHRLPWLNLEHNQLT 374



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 90/219 (41%), Positives = 113/219 (51%), Gaps = 31/219 (14%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM 122
           LYH NL+    N     ++  LDL+ N++T LPQ I                        
Sbjct: 26  LYHRNLNEALKNP---MDVWMLDLTRNQLTVLPQEI------------------------ 58

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             L+NL    L  NQL   P +I  +  LK+LYL  N L  +P+EI KL +L  L LGGN
Sbjct: 59  GKLQNLFSLYLENNQLTTLPQEIETLQKLKWLYLSENQLATLPKEIGKLQRLERLYLGGN 118

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            LT IP   G L  LE L L +NQL +LP  I  L+ L+ L L NN+LRTLP EI TL  
Sbjct: 119 QLTTIPQEIGALQDLEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTLPKEIGTL-- 176

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             + L+ L + NN+L TLP EI TL+ L  L L  N L 
Sbjct: 177 --QHLQDLNVFNNQLITLPQEIGTLQNLKYLRLAYNQLT 213


>gi|417761946|ref|ZP_12409943.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|409942208|gb|EKN87828.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
          Length = 305

 Score =  130 bits (328), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 99/229 (43%), Positives = 129/229 (56%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+ TL L  N L+  P  + K  NL+ L+LS+N++T LPQ I     L TL  ++N 
Sbjct: 38  KLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQ 97

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +L K++  LKNL+  NLS NQL   PI+I  +  L  L L +N L  +P EI KL 
Sbjct: 98  LT--TLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQ 155

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            LH L+L GN LT +    G L  L+ L L  NQL +L   I  LK L++L L  N+L  
Sbjct: 156 NLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVI 215

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP EI  L+ L E    L L NN+L  LP EI  L+ L  LSL  N L+
Sbjct: 216 LPKEIGQLQNLQE----LNLWNNQLTALPIEIGQLQNLQTLSLYKNRLM 260



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/218 (42%), Positives = 120/218 (55%), Gaps = 7/218 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L+  P    K  NL+ LDL +NR+T LP  I     L TL   +N LT  +LP++   
Sbjct: 4   NQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLT--TLPRESGK 61

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+NL+  NLS NQL   P +I  +  L+ L L +N L  + +EI +L  L  L+L  N L
Sbjct: 62  LENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQL 121

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T +P   G L  L  L LSDNQL +LP  I  L+ L +L L  N+L TL  EI  L    
Sbjct: 122 TTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKL---- 177

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           + L+ L LH+N+L TL  EI  LK L  LSL  N LVI
Sbjct: 178 QNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVI 215



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 106/190 (55%), Gaps = 3/190 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+       +  NL++L+LS+N++T LP  I     L TL   +N LT
Sbjct: 86  QNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLT 145

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  L+NL   NLSGNQL    I+I  +  L+ L L +N L  + +EI +L  L
Sbjct: 146 --TLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNL 203

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             LSL  N L  +P   G L  L+ L L +NQL +LP  I  L+ L++L L+ N+L T P
Sbjct: 204 QTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFP 263

Query: 235 TEIITLKCLS 244
            EI  LK L 
Sbjct: 264 KEIGQLKNLQ 273



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/149 (43%), Positives = 85/149 (57%), Gaps = 4/149 (2%)

Query: 133 LSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFG 192
           +S NQL   P +I  +  L+ L L +N L  +P EI KL  L  L L  N LT +P   G
Sbjct: 1   MSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESG 60

Query: 193 DLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLL 252
            L  L+ L LSDNQL +LP  I  L+ L++L L +N+L TL  EI  LK     L++L L
Sbjct: 61  KLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLK----NLQTLNL 116

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            +N+L TLP EI  L+ L  L+L DN L 
Sbjct: 117 SDNQLTTLPIEIGKLQNLHTLNLSDNQLT 145



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/175 (37%), Positives = 92/175 (52%), Gaps = 5/175 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  P    K  NL +L+LS+N++T LP  I     L TL    N LT
Sbjct: 109 KNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLT 168

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             S+  ++  L+NL+  NL  NQL     +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 169 TLSI--EIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNL 226

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL--HN 227
             L+L  N LT +P   G L  L+ L L  N+L + P  I  LK L++L L  HN
Sbjct: 227 QELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHN 281



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/106 (41%), Positives = 59/106 (55%), Gaps = 4/106 (3%)

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           +  N LT +P   G L  L+ L L DN+L  LP  I  L+ L++L L +N+L TLP E  
Sbjct: 1   MSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESG 60

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRF 284
            L    E L+ L L +N+L TLP EI  L+ L  L+L+ N L   F
Sbjct: 61  KL----ENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLF 102


>gi|398341354|ref|ZP_10526057.1| leucine-rich repeat protein [Leptospira kirschneri serovar Bim str.
           1051]
          Length = 305

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/230 (42%), Positives = 127/230 (55%), Gaps = 7/230 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K P ++  L L    L+  P    +  NL++L+L NN+ T LP  I     L  L   +N
Sbjct: 41  KNPLDVRVLNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLRELYLGDN 100

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  +LPK++  LKNL+VF L+ NQL   P +I  +  L++L L NN L  +P+E+ +L
Sbjct: 101 QLT--TLPKEVGQLKNLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTTLPKEVGQL 158

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L+ LSL  N LT +P   G L  L  L LS N L  LP  I  LK L SL L  N+L 
Sbjct: 159 KNLYDLSLHDNKLTTLPKETGQLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNLTYNQLT 218

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           TLP EI  L+ L E    L L +N+L+TLP EI  LK L EL LR N L 
Sbjct: 219 TLPKEIGQLQSLRE----LYLGDNQLKTLPKEIGQLKNLRELLLRHNQLT 264



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 88/226 (38%), Positives = 117/226 (51%), Gaps = 15/226 (6%)

Query: 46  LPNNDYNKKPENIDTL------LLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN +   P  I  L       L  N L+  P    +  NL+  +L+NN++T LP  I 
Sbjct: 74  LWNNQFTTLPNEIGQLQSLRELYLGDNQLTTLPKEVGQLKNLQVFELNNNQLTTLPAEIG 133

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L  L   NN LT  +LPK++  LKNL   +L  N+L   P +   +  L+ L L  
Sbjct: 134 KLKNLQHLDLWNNQLT--TLPKEVGQLKNLYDLSLHDNKLTTLPKETGQLKNLRMLNLSK 191

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P EI +L KL  L+L  N LT +P   G L  L  L L DNQL++LP  I  LK
Sbjct: 192 NLLTILPNEIGQLKKLLSLNLTYNQLTTLPKEIGQLQSLRELYLGDNQLKTLPKEIGQLK 251

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
            L+ LLL +N+L T+P EI  LK    KL+ LLL  N +  LP E+
Sbjct: 252 NLRELLLRHNQLTTVPKEIGQLK----KLRWLLLDANPI--LPKEL 291



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/169 (42%), Positives = 94/169 (55%), Gaps = 4/169 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T + L K + N  +++V NLS  +L   P +I  +  L+ L L NN    +P EI +L  
Sbjct: 32  TYKDLTKALKNPLDVRVLNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQS 91

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L LG N LT +P   G L  L+   L++NQL +LPA I  LK L+ L L NN+L TL
Sbjct: 92  LRELYLGDNQLTTLPKEVGQLKNLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTTL 151

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P E+  LK L +    L LH+NKL TLP E   LK L  L+L  N L I
Sbjct: 152 PKEVGQLKNLYD----LSLHDNKLTTLPKETGQLKNLRMLNLSKNLLTI 196


>gi|456822986|gb|EMF71456.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 423

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 95/226 (42%), Positives = 124/226 (54%), Gaps = 7/226 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K EN+  L LY + L+  P    K  NL  LDLS+N++T LP+ I     L   +  NN 
Sbjct: 182 KLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQ 241

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT   LPK++  L+NL    L  NQL   P +I  +  L+   L NN    +P+EI +L 
Sbjct: 242 LTI--LPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQ 299

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N LT  P   G L +L+ L L +NQL +LP  I  LK LK+L L  N+L+T
Sbjct: 300 NLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKT 359

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           +P EI  L    + LKSL L NN+L TLP EI  LK L  L+L +N
Sbjct: 360 IPQEIGQL----QNLKSLDLSNNQLTTLPKEIEQLKNLQTLNLWNN 401



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/229 (40%), Positives = 124/229 (54%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L+L    L+  P    +  NL+ LDL +N++T LP+ I     L  LI   N L
Sbjct: 45  PLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQL 104

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA  LPK++  LKNLKV  L+ NQL   P +I  +  L+ L LGNN L  +P+EI +L  
Sbjct: 105 TA--LPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQN 162

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P   G L  L+ L L ++QL  LP  I  L+ L  L L +N+L  L
Sbjct: 163 LQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTIL 222

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  L    + L+  +L NN+L  LP EI  L+ L EL L  N L I
Sbjct: 223 PKEIGQL----QNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTI 267



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/227 (40%), Positives = 123/227 (54%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L +N L+  P    K  NL+ L L  +++T LPQ I     L  L   +N LT
Sbjct: 161 QNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLT 220

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+ F L  NQL   P +I  +  L  LYLG+N L  +P+EI +L  L
Sbjct: 221 I--LPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNL 278

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
               L  N  T +P   G L  L+ L LS NQL + P  I  L+ L++L L NN+L TLP
Sbjct: 279 QRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLP 338

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  LK     LK+L L  N+L+T+P EI  L+ L  L L +N L 
Sbjct: 339 EEIEQLK----NLKTLNLSENQLKTIPQEIGQLQNLKSLDLSNNQLT 381



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/229 (39%), Positives = 125/229 (54%), Gaps = 7/229 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           ++ +N+  L L +N L+  P    +  NL+ L LS N++T LP+ I     L  L    +
Sbjct: 135 RQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYES 194

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT   LP+++  L+NL   +LS NQL   P +I  +  L+   L NN L  +P+EI KL
Sbjct: 195 QLTI--LPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKL 252

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             LH L LG N LT +P   G L  L+  +L +NQ   LP  I  L+ L+ L L  N+L 
Sbjct: 253 QNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLT 312

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           T P EI  L    +KL++L L NN+L TLP EI  LK L  L+L +N L
Sbjct: 313 TFPKEIGKL----QKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQL 357



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/231 (39%), Positives = 123/231 (53%), Gaps = 7/231 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K+ +N+  L L HN L+  P    +  NL+ L L  N++T LP+ I     L  L   NN
Sbjct: 66  KQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNN 125

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  +LP ++  LKNL++ +L  NQL   P +I  +  L+ LYL  N L  +P+EI KL
Sbjct: 126 QLT--TLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKL 183

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L +LSL  + LT +P   G L  L  L LS NQL  LP  I  L+ L+  +L NN+L 
Sbjct: 184 ENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLT 243

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            LP EI  L+ L E    L L +N+L  LP EI  L+ L    L +N   I
Sbjct: 244 ILPKEIGKLQNLHE----LYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTI 290



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/227 (39%), Positives = 121/227 (53%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L+LY+N L+  P    +  NL+ L L+NN++T LP  I     L  L   NN LT
Sbjct: 92  KNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLT 151

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+   LS NQL   P +I  +  L+ L L  + L  +P+EI KL  L
Sbjct: 152 I--LPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNL 209

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
           H L L  N LT +P   G L  L+  +L +NQL  LP  I  L+ L  L L +N+L  LP
Sbjct: 210 HELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILP 269

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L    + L+  +L NN+   LP EI  L+ L EL L  N L 
Sbjct: 270 KEIGQL----QNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLT 312



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/202 (38%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T + L K + N  +++V  LS  +L   P +I  +  LK L LG+N L  +P+EI +L  
Sbjct: 34  TYQDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P   G L  L+ L L++NQL +LP  I  LK L+ L L NN+L  L
Sbjct: 94  LQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTIL 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPP 293
           P EI  L+ L E    L L  N+L TLP EI  L+ L  LSL        + S +T  P 
Sbjct: 154 PKEIGQLQNLQE----LYLSYNQLTTLPKEIGKLENLQLLSL--------YESQLTILPQ 201

Query: 294 SLLELASRTLKVHEIDYSQEHL 315
            + +L +    +HE+D S   L
Sbjct: 202 EIGKLQN----LHELDLSHNQL 219


>gi|418672935|ref|ZP_13234265.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|410580042|gb|EKQ47873.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 738

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 98/237 (41%), Positives = 124/237 (52%), Gaps = 16/237 (6%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L  FP    +  NL++L+L +N++  LP  I     L  L  R N LT
Sbjct: 117 QNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLT 176

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+  NL  NQL   P++I  +  L+ L L  N L   P+EI +L  L
Sbjct: 177 V--LPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENL 234

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALIL---------SDNQLESLPASISNLKMLKSLLL 225
             L L GN L  +P   G L +LE L L           NQL +LPA I  LK L+ L L
Sbjct: 235 QELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSL 294

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
             N+L TLP EI  L    + LKSL L  N+L TLP EI  LK L EL L  N L I
Sbjct: 295 SYNRLATLPREIGQL----QNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTI 347



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 93/234 (39%), Positives = 125/234 (53%), Gaps = 12/234 (5%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLL 113
           +N+  L L  N L+ FP    +   L SLDLS NR+  LP  I     L  L + +N L+
Sbjct: 71  KNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLI 130

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T    PK++  L+NL+  NL  NQL   P++I  +  L+ L L  N L  +P+EI +L  
Sbjct: 131 T---FPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQN 187

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N L  +P   G L  L+ L LS+NQL + P  I  L+ L+ L L+ N+L+TL
Sbjct: 188 LQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTL 247

Query: 234 PTEIITLKCLSEKLK------SLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L+ L EKL       + L   N+L TLP EI  LK L  LSL  N L 
Sbjct: 248 PKEIGQLQKL-EKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLA 300



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/255 (35%), Positives = 127/255 (49%), Gaps = 33/255 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-----------LS 104
           +N+ TL L  N L+ FP    +  NL+ LDL+ N++  LP+ I               ++
Sbjct: 209 QNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQIT 268

Query: 105 TLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHV 164
           TL   N L T   LP ++  LKNL++ +LS N+L   P +I  +  LK L LG N L  +
Sbjct: 269 TLPKGNQLTT---LPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTL 325

Query: 165 PREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLL 224
           PREINKL  L  L L GN LT +P    +L  L  L L +N++ +LP  I   K L+ L 
Sbjct: 326 PREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELN 385

Query: 225 LHNNKLRTLPTEI-------------ITLKCLSEKLKSLL------LHNNKLRTLPTEII 265
           L  N+L TLP EI               +K L  ++ +L       L  NKL ++P EI 
Sbjct: 386 LRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIG 445

Query: 266 TLKCLSELSLRDNPL 280
            L+ L  L L +N L
Sbjct: 446 NLQNLRMLYLENNQL 460



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 84/225 (37%), Positives = 118/225 (52%), Gaps = 7/225 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLL 113
           P N+  L L   N +  P    +  NL+ LDL +N++   P  I     L +L    N L
Sbjct: 47  PLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRL 106

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L+NL+   L  N+L  FP +I  +  L+ L L +N L  +P EI +L  
Sbjct: 107 VM--LPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQN 164

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N LT +P   G L  L+ L L DNQL +LP  I  L+ L++L L  N+L T 
Sbjct: 165 LEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTF 224

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P EI  L    E L+ L L+ N+L+TLP EI  L+ L +L+L  N
Sbjct: 225 PKEIGQL----ENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGN 265



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/238 (36%), Positives = 122/238 (51%), Gaps = 31/238 (13%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N L+  P    +  NL++L+L +N++  LP  I     L TL    N LT
Sbjct: 163 QNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLT 222

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL-GN--------NSLNHVP 165
             + PK++  L+NL+  +L+GNQL+  P +I  +  L+ L L GN        N L  +P
Sbjct: 223 --TFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLP 280

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
            EI +L  L +LSL  N L  +P   G L  L++L L  NQL +LP  I+ LK LK L L
Sbjct: 281 AEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYL 340

Query: 226 HNNKLRTLPTEIITLKCL-------------------SEKLKSLLLHNNKLRTLPTEI 264
           + NKL  +P EI  L+ L                   S+ L+ L L  N+L TLP EI
Sbjct: 341 NGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEI 398



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 91/164 (55%), Gaps = 4/164 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++  LKNL+  +L  NQL  FP  I+++  L+ L L  N L  +P EI +L  L  
Sbjct: 62  TLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQE 121

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L   P   G L  L+ L L DNQL +LP  I  L+ L+ L L  N+L  LP E
Sbjct: 122 LGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKE 181

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L    + L++L L +N+L TLP EI  L+ L  L L +N L
Sbjct: 182 IGQL----QNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQL 221



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 83/217 (38%), Positives = 122/217 (56%), Gaps = 7/217 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L+  P    +  NL+ L LS NR+  LP+ I     L +L    N LT  +LP++++ 
Sbjct: 274 NQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLT--TLPREINK 331

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           LKNLK   L+GN+L   P +I ++  L  L L NN ++ +P+EI K   L  L+L GN L
Sbjct: 332 LKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRL 391

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
             +P   G+L  LE L L +N+++ LP  I  L+ L    L  NKL ++P EI  L    
Sbjct: 392 VTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNL---- 447

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           + L+ L L NN+L+TLP ++  L+ L  L+L  NPL+
Sbjct: 448 QNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLL 484



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/229 (34%), Positives = 120/229 (52%), Gaps = 29/229 (12%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNL 112
           ++P  I +L L +   S FP    K  NLRSL L +               ++L+A    
Sbjct: 519 EQPLKILSLSLEYQQFSLFPKEILKLKNLRSLSLYD---------------TSLVA---- 559

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG-NNSLNHVPREINKL 171
                LPK++  LK+L+  +L  NQL+  P +I  +  L+ L +G NN    +P+EI +L
Sbjct: 560 -----LPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARL 614

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L L  N     P    +L +L  L ++ NQL++LP  I  LK L+ L L +N+L 
Sbjct: 615 QNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLT 674

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           TLP+EI  L  L+E    L L  N+++TLP EI  L+ L +L+L +NP+
Sbjct: 675 TLPSEIGQLHNLTE----LYLQYNRIKTLPEEIARLQNLRKLTLYENPI 719



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 90/168 (53%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  N++V NLSG      P +I  +  L+ L LG+N L   P  I +L K
Sbjct: 36  TYMDLTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQK 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L  +P+  G L  L+ L L  N+L + P  I  L+ L++L L +N+L TL
Sbjct: 96  LESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L+ L EKL    L  N+L  LP EI  L+ L  L+L+DN L 
Sbjct: 156 PVEIGQLQNL-EKLN---LRKNRLTVLPKEIGQLQNLQTLNLQDNQLA 199



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 53/103 (51%), Gaps = 11/103 (10%)

Query: 186 DIPDTFGDLYQ-------LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           D P T+ DL +       +  L LS     +LP  I  LK L+ L L +N+L T P  I+
Sbjct: 32  DEPGTYMDLTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIV 91

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L    +KL+SL L  N+L  LP EI  L+ L EL L  N L+
Sbjct: 92  EL----QKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLI 130


>gi|418727702|ref|ZP_13286290.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959060|gb|EKO22837.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 378

 Score =  130 bits (328), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 93/229 (40%), Positives = 124/229 (54%), Gaps = 7/229 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L++N L        +  NL+ L L NN++T  P+ I     L +L   NN LT
Sbjct: 139 QNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLT 198

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+NL+   LS NQL  FP +I  +  L++L LG+N L  +P EI KL KL
Sbjct: 199 --TFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKL 256

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N LT IP   G L  L+ L LS NQ +++P     LK LK L L  N+L  LP
Sbjct: 257 QELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALP 316

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
            EI  LK     LK L L  N+L T+P EI  L+ L  L LR+N   I 
Sbjct: 317 KEIGKLK----NLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQFSIE 361



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 95/240 (39%), Positives = 126/240 (52%), Gaps = 13/240 (5%)

Query: 49  NDYNKKPENIDTLLLYH------NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP 102
           N +   P+ I+ L   H      N L+  P    +  NL+ L+L NN++  + + I    
Sbjct: 103 NQFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLK 162

Query: 103 -LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L  L   NN LTA   PK++  L+NLK   LS NQL  FP +I  +  L+ LYL NN L
Sbjct: 163 NLQKLYLDNNQLTA--FPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQL 220

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
              P+EI KL KL  L LG N LT IP+  G L +L+ L L  NQL ++P  I  L+ L+
Sbjct: 221 TTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQ 280

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L L  N+ +T+P E   LK     LK L L  N+L  LP EI  LK L  L+L  N L+
Sbjct: 281 VLFLSYNQFKTIPVEFGQLK----NLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLI 336



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/226 (36%), Positives = 111/226 (49%), Gaps = 28/226 (12%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLT 114
           P ++  L+L    L   P+   +  NL+ L+LS+N++                       
Sbjct: 46  PLDVRVLILSEQKLKALPEKIGQLKNLQMLNLSDNQLI---------------------- 83

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  LKNL+   L+ NQ + FP +I  + +L  LYL NN L  +P EI +L  L
Sbjct: 84  --ILPKEIRQLKNLQELFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNL 141

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N L  I      L  L+ L L +NQL + P  I  L+ LKSL L NN+L T P
Sbjct: 142 QELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFP 201

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L+ L E    L L NN+L T P EI  L+ L  L L DN L
Sbjct: 202 KEIGKLQNLQE----LYLSNNQLTTFPKEIGKLQKLQWLGLGDNQL 243



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 3/133 (2%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K + +  L L  N L+  P+   K   L+ L+L  N++T +P+ I     L  L    N 
Sbjct: 229 KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYN- 287

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
              +++P +   LKNLK+ +L  NQL   P +I  +  LK L L  N L  +P+EI +L 
Sbjct: 288 -QFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLITIPKEIGQLQ 346

Query: 173 KLHVLSLGGNSLT 185
            L  L L  N  +
Sbjct: 347 NLQTLYLRNNQFS 359



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 4/97 (4%)

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           D+   F +   +  LILS+ +L++LP  I  LK L+ L L +N+L  LP EI  LK L E
Sbjct: 38  DLTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLNLSDNQLIILPKEIRQLKNLQE 97

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
               L L+ N+ +T P EI  LK L +L L +N L I
Sbjct: 98  ----LFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTI 130



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 11/117 (9%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLP---QAITNFPLSTLIARNNLLTAESLPKDM 122
           N L+  P    +  NL+ L LS N+   +P     + N  + +L A  N LTA  LPK++
Sbjct: 264 NQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDA--NQLTA--LPKEI 319

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INKL---CKLH 175
             LKNLK+ NL  NQL   P +I  +  L+ LYL NN  +   +E I KL   C+++
Sbjct: 320 GKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQFSIEEKERIRKLLPKCQIY 376


>gi|398341370|ref|ZP_10526073.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 398

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 100/246 (40%), Positives = 131/246 (53%), Gaps = 9/246 (3%)

Query: 37  ETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQ 96
           E +  Q+E LPN     K  ++  L L +N L   P    +  NL+ L L +N++T LP 
Sbjct: 96  ELIHNQLETLPNEIEQLK--DLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPT 153

Query: 97  AITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLY 155
            I     L  L   NN L   +LP+++  LKNL+  NL  NQL   P +I  +  L+ LY
Sbjct: 154 EIGQLKNLQRLQLWNNQLM--TLPEEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQELY 211

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           LG+N L  +P EI +L KL  LSL  N LT +P+  G L  L+ L L  NQL  LP  I 
Sbjct: 212 LGSNQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIG 271

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            LK L++L L +N+L TL  +I  L    + LKSL L NN+L T P EI  LK L  L L
Sbjct: 272 QLKNLQTLYLRSNRLTTLSKDIEQL----QNLKSLDLWNNQLTTFPKEIEQLKNLQVLDL 327

Query: 276 RDNPLV 281
             N L 
Sbjct: 328 GSNQLT 333



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 98/261 (37%), Positives = 134/261 (51%), Gaps = 18/261 (6%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           + ++ LD S   L  +TL  +IE L         +N+  L L +N L   P    +  NL
Sbjct: 44  LDVRVLDLSQQKL--KTLPNEIEQL---------KNLQRLYLSYNQLKTLPKEIGQLQNL 92

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           R L+L +N++  LP  I     L  L    N L  ++LPK++  L+NL+   L  NQL  
Sbjct: 93  RVLELIHNQLETLPNEIEQLKDLQRLYLSYNQL--KTLPKEIRQLQNLQELYLRDNQLTT 150

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +I  +  L+ L L NN L  +P EI +L  L  L+LG N LT +P+  G L  L+ L
Sbjct: 151 LPTEIGQLKNLQRLQLWNNQLMTLPEEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQEL 210

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L  NQL +LP  I  L+ L+ L L  N+L TLP EI  L    + L+ L L +N+L  L
Sbjct: 211 YLGSNQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQL----QNLQDLYLGSNQLTIL 266

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P EI  LK L  L LR N L 
Sbjct: 267 PNEIGQLKNLQTLYLRSNRLT 287



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/231 (37%), Positives = 122/231 (52%), Gaps = 7/231 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           + P ++  L L    L   P+   +  NL+ L LS N++  LP+ I     L  L   +N
Sbjct: 41  QNPLDVRVLDLSQQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRVLELIHN 100

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            L  E+LP ++  LK+L+   LS NQL+  P +I  +  L+ LYL +N L  +P EI +L
Sbjct: 101 QL--ETLPNEIEQLKDLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQL 158

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L L  N L  +P+  G L  L+ L L  NQL +LP  I  L+ L+ L L +N+L 
Sbjct: 159 KNLQRLQLWNNQLMTLPEEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQELYLGSNQLT 218

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            LP EI  L    +KL+ L L  N+L TLP EI  L+ L +L L  N L I
Sbjct: 219 ALPNEIGQL----QKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTI 265



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/191 (37%), Positives = 101/191 (52%), Gaps = 3/191 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L +N L+  P+   +  NL+ L L +N++T LP  I     L  L    N LT
Sbjct: 182 KNLQTLNLGYNQLTALPNEIGQLQNLQELYLGSNQLTALPNEIGQLQKLQELSLSTNRLT 241

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  L+NL+   L  NQL   P +I  +  L+ LYL +N L  + ++I +L  L
Sbjct: 242 --TLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNL 299

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT  P     L  L+ L L  NQL +LP  I  LK L+   L+NN+L TLP
Sbjct: 300 KSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLP 359

Query: 235 TEIITLKCLSE 245
            EI  L+ L E
Sbjct: 360 KEIGQLQNLQE 370



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/188 (40%), Positives = 100/188 (53%), Gaps = 5/188 (2%)

Query: 94  LPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKY 153
           L +AI N PL   +   +    ++LP ++  LKNL+   LS NQL+  P +I  +  L+ 
Sbjct: 36  LTEAIQN-PLDVRVLDLSQQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQNLRV 94

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           L L +N L  +P EI +L  L  L L  N L  +P     L  L+ L L DNQL +LP  
Sbjct: 95  LELIHNQLETLPNEIEQLKDLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTE 154

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           I  LK L+ L L NN+L TLP EI  LK     L++L L  N+L  LP EI  L+ L EL
Sbjct: 155 IGQLKNLQRLQLWNNQLMTLPEEIGQLK----NLQTLNLGYNQLTALPNEIGQLQNLQEL 210

Query: 274 SLRDNPLV 281
            L  N L 
Sbjct: 211 YLGSNQLT 218



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/168 (41%), Positives = 95/168 (56%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L + + N  +++V +LS  +L+  P +I  +  L+ LYL  N L  +P+EI +L  
Sbjct: 32  TYMDLTEAIQNPLDVRVLDLSQQKLKTLPNEIEQLKNLQRLYLSYNQLKTLPKEIGQLQN 91

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L VL L  N L  +P+    L  L+ L LS NQL++LP  I  L+ L+ L L +N+L TL
Sbjct: 92  LRVLELIHNQLETLPNEIEQLKDLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTL 151

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           PTEI  LK     L+ L L NN+L TLP EI  LK L  L+L  N L 
Sbjct: 152 PTEIGQLK----NLQRLQLWNNQLMTLPEEIGQLKNLQTLNLGYNQLT 195


>gi|417762759|ref|ZP_12410747.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|409941504|gb|EKN87133.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
          Length = 738

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/237 (41%), Positives = 124/237 (52%), Gaps = 16/237 (6%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L  FP    +  NL++L+L +N++  LP  I     L  L  R N LT
Sbjct: 117 QNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLT 176

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+  NL  NQL   P++I  +  L+ L L  N L   P+EI +L  L
Sbjct: 177 V--LPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENL 234

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALIL---------SDNQLESLPASISNLKMLKSLLL 225
             L L GN L  +P   G L +LE L L           NQL +LPA I  LK L+ L L
Sbjct: 235 QELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSL 294

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
             N+L TLP EI  L    + LKSL L  N+L TLP EI  LK L EL L  N L I
Sbjct: 295 SYNRLATLPREIGQL----QNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTI 347



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 93/234 (39%), Positives = 125/234 (53%), Gaps = 12/234 (5%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLL 113
           +N+  L L  N L+ FP    +   L SLDLS NR+  LP  I     L  L + +N L+
Sbjct: 71  KNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLI 130

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T    PK++  L+NL+  NL  NQL   P++I  +  L+ L L  N L  +P+EI +L  
Sbjct: 131 T---FPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQN 187

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N L  +P   G L  L+ L LS+NQL + P  I  L+ L+ L L+ N+L+TL
Sbjct: 188 LQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTL 247

Query: 234 PTEIITLKCLSEKLK------SLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L+ L EKL       + L   N+L TLP EI  LK L  LSL  N L 
Sbjct: 248 PKEIGQLQKL-EKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLA 300



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/255 (35%), Positives = 127/255 (49%), Gaps = 33/255 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-----------LS 104
           +N+ TL L  N L+ FP    +  NL+ LDL+ N++  LP+ I               ++
Sbjct: 209 QNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQIT 268

Query: 105 TLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHV 164
           TL   N L T   LP ++  LKNL++ +LS N+L   P +I  +  LK L LG N L  +
Sbjct: 269 TLPKGNQLTT---LPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTL 325

Query: 165 PREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLL 224
           PREINKL  L  L L GN LT +P    +L  L  L L +N++ +LP  I   K L+ L 
Sbjct: 326 PREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELN 385

Query: 225 LHNNKLRTLPTEI-------------ITLKCLSEKLKSLL------LHNNKLRTLPTEII 265
           L  N+L TLP EI               +K L  ++ +L       L  NKL ++P EI 
Sbjct: 386 LRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIG 445

Query: 266 TLKCLSELSLRDNPL 280
            L+ L  L L +N L
Sbjct: 446 NLQNLRMLYLENNQL 460



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 84/225 (37%), Positives = 118/225 (52%), Gaps = 7/225 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLL 113
           P N+  L L   N +  P    +  NL+ LDL +N++   P  I     L +L    N L
Sbjct: 47  PLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRL 106

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L+NL+   L  N+L  FP +I  +  L+ L L +N L  +P EI +L  
Sbjct: 107 VM--LPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQN 164

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N LT +P   G L  L+ L L DNQL +LP  I  L+ L++L L  N+L T 
Sbjct: 165 LEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTF 224

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P EI  L    E L+ L L+ N+L+TLP EI  L+ L +L+L  N
Sbjct: 225 PKEIGQL----ENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGN 265



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/238 (36%), Positives = 122/238 (51%), Gaps = 31/238 (13%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N L+  P    +  NL++L+L +N++  LP  I     L TL    N LT
Sbjct: 163 QNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLT 222

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL-GN--------NSLNHVP 165
             + PK++  L+NL+  +L+GNQL+  P +I  +  L+ L L GN        N L  +P
Sbjct: 223 --TFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLP 280

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
            EI +L  L +LSL  N L  +P   G L  L++L L  NQL +LP  I+ LK LK L L
Sbjct: 281 AEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYL 340

Query: 226 HNNKLRTLPTEIITLKCL-------------------SEKLKSLLLHNNKLRTLPTEI 264
           + NKL  +P EI  L+ L                   S+ L+ L L  N+L TLP EI
Sbjct: 341 NGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEI 398



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 91/164 (55%), Gaps = 4/164 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++  LKNL+  +L  NQL  FP  I+++  L+ L L  N L  +P EI +L  L  
Sbjct: 62  TLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQE 121

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L   P   G L  L+ L L DNQL +LP  I  L+ L+ L L  N+L  LP E
Sbjct: 122 LGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKE 181

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L    + L++L L +N+L TLP EI  L+ L  L L +N L
Sbjct: 182 IGQL----QNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQL 221



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 83/217 (38%), Positives = 122/217 (56%), Gaps = 7/217 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L+  P    +  NL+ L LS NR+  LP+ I     L +L    N LT  +LP++++ 
Sbjct: 274 NQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLT--TLPREINK 331

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           LKNLK   L+GN+L   P +I ++  L  L L NN ++ +P+EI K   L  L+L GN L
Sbjct: 332 LKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRL 391

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
             +P   G+L  LE L L +N+++ LP  I  L+ L    L  NKL ++P EI  L    
Sbjct: 392 VTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNL---- 447

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           + L+ L L NN+L+TLP ++  L+ L  L+L  NPL+
Sbjct: 448 QNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLL 484



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 120/229 (52%), Gaps = 29/229 (12%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNL 112
           ++P  I +L L +   S FP    +  NLRSL L +               ++L+A    
Sbjct: 519 EQPLKILSLSLEYQQFSLFPKEILRLKNLRSLSLYD---------------TSLVA---- 559

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG-NNSLNHVPREINKL 171
                LPK++  LK+L+  +L  NQL+  P +I  +  L+ L +G NN    +P+EI +L
Sbjct: 560 -----LPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARL 614

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L L  N     P    +L +L  L ++ NQL++LP  I  LK L+ L L +N+L 
Sbjct: 615 QNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLT 674

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           TLP+EI  L  L+E    L L  N+++TLP EI  L+ L +L+L +NP+
Sbjct: 675 TLPSEIGQLHNLTE----LYLQYNRIKTLPEEIARLQNLRKLTLYENPI 719



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 90/168 (53%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  N++V NLSG      P +I  +  L+ L LG+N L   P  I +L K
Sbjct: 36  TYMDLTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQK 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L  +P+  G L  L+ L L  N+L + P  I  L+ L++L L +N+L TL
Sbjct: 96  LESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L+ L EKL    L  N+L  LP EI  L+ L  L+L+DN L 
Sbjct: 156 PVEIGQLQNL-EKLN---LRKNRLTVLPKEIGQLQNLQTLNLQDNQLA 199



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 53/103 (51%), Gaps = 11/103 (10%)

Query: 186 DIPDTFGDLYQ-------LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           D P T+ DL +       +  L LS     +LP  I  LK L+ L L +N+L T P  I+
Sbjct: 32  DEPGTYMDLTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIV 91

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L    +KL+SL L  N+L  LP EI  L+ L EL L  N L+
Sbjct: 92  EL----QKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLI 130


>gi|418668205|ref|ZP_13229608.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756062|gb|EKR17689.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 329

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/221 (42%), Positives = 123/221 (55%), Gaps = 7/221 (3%)

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDM 122
           Y+N L+  P    +  NL++L L NN+IT LP+ I     L  L   NN LT  +LPK++
Sbjct: 98  YYNQLTILPKEIEQLKNLQTLYLGNNQITILPKEIRQLQNLKVLFLSNNQLT--TLPKEI 155

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             LKNL+   L  N+L  FP +I  +  L+ LYL +N L  +P+EI +L  L +L L  N
Sbjct: 156 EQLKNLQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYN 215

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            LT +P     L  L+ L L  NQL  LP  I  LK L++L L  N+L  LP EI  L  
Sbjct: 216 QLTVLPKEIEQLKNLQELNLGYNQLTVLPKEIEQLKNLQTLYLGYNQLTVLPKEIGQL-- 273

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
             + LK L L+NN+L TLP +I  LK L EL L +N L I 
Sbjct: 274 --QNLKVLFLNNNQLTTLPKKIGQLKNLQELYLNNNQLSIE 312



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/203 (41%), Positives = 114/203 (56%), Gaps = 7/203 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L +N ++  P    +  NL+ L LSNN++T LP+ I     L TL   NN LT
Sbjct: 113 KNLQTLYLGNNQITILPKEIRQLQNLKVLFLSNNQLTTLPKEIEQLKNLQTLYLGNNRLT 172

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  LKNL++  L  NQL   P +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 173 --TFPKEIEQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLTVLPKEIEQLKNL 230

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+LG N LT +P     L  L+ L L  NQL  LP  I  L+ LK L L+NN+L TLP
Sbjct: 231 QELNLGYNQLTVLPKEIEQLKNLQTLYLGYNQLTVLPKEIGQLQNLKVLFLNNNQLTTLP 290

Query: 235 TEIITLKCLSEKLKSLLLHNNKL 257
            +I  LK L E    L L+NN+L
Sbjct: 291 KKIGQLKNLQE----LYLNNNQL 309



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/229 (40%), Positives = 116/229 (50%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN-NLL 113
           P ++  L L    L+  P    +  NL+ L+L NN+IT LP+ I       L+    N L
Sbjct: 43  PLDVRILNLSEQKLTTLPKEIGQLKNLQELNLGNNQITILPKEIGQLQNLQLLGLYYNQL 102

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++  LKNL+   L  NQ+   P +I  +  LK L+L NN L  +P+EI +L  
Sbjct: 103 TI--LPKEIEQLKNLQTLYLGNNQITILPKEIRQLQNLKVLFLSNNQLTTLPKEIEQLKN 160

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L LG N LT  P     L  L+ L L DNQL  LP  I  LK L+ L L  N+L  L
Sbjct: 161 LQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLTVL 220

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK L E    L L  N+L  LP EI  LK L  L L  N L +
Sbjct: 221 PKEIEQLKNLQE----LNLGYNQLTVLPKEIEQLKNLQTLYLGYNQLTV 265



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 101/192 (52%), Gaps = 4/192 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  ++++ NLS  +L   P +I  +  L+ L LGNN +  +P+EI +L  
Sbjct: 32  TYWDLTKALQNPLDVRILNLSEQKLTTLPKEIGQLKNLQELNLGNNQITILPKEIGQLQN 91

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P     L  L+ L L +NQ+  LP  I  L+ LK L L NN+L TL
Sbjct: 92  LQLLGLYYNQLTILPKEIEQLKNLQTLYLGNNQITILPKEIRQLQNLKVLFLSNNQLTTL 151

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPP 293
           P EI  LK     L++L L NN+L T P EI  LK L  L L DN L +        K  
Sbjct: 152 PKEIEQLK----NLQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVLPQEIKQLKNL 207

Query: 294 SLLELASRTLKV 305
            LL+L+   L V
Sbjct: 208 QLLDLSYNQLTV 219



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 67/122 (54%), Gaps = 4/122 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K+ +N+  L L +N L+  P    +  NL+ L+L  N++T LP+ I     L TL    N
Sbjct: 202 KQLKNLQLLDLSYNQLTVLPKEIEQLKNLQELNLGYNQLTVLPKEIEQLKNLQTLYLGYN 261

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INK 170
            LT   LPK++  L+NLKV  L+ NQL   P +I  +  L+ LYL NN L+   +E I K
Sbjct: 262 QLTV--LPKEIGQLQNLKVLFLNNNQLTTLPKKIGQLKNLQELYLNNNQLSIEEKERIQK 319

Query: 171 LC 172
           L 
Sbjct: 320 LI 321



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 53/102 (51%), Gaps = 11/102 (10%)

Query: 188 PDTFGDLYQ-------LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           P T+ DL +       +  L LS+ +L +LP  I  LK L+ L L NN++  LP EI  L
Sbjct: 30  PGTYWDLTKALQNPLDVRILNLSEQKLTTLPKEIGQLKNLQELNLGNNQITILPKEIGQL 89

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           + L      L L+ N+L  LP EI  LK L  L L +N + I
Sbjct: 90  QNLQ----LLGLYYNQLTILPKEIEQLKNLQTLYLGNNQITI 127


>gi|417776853|ref|ZP_12424685.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410573349|gb|EKQ36399.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
          Length = 738

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/237 (41%), Positives = 124/237 (52%), Gaps = 16/237 (6%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L  FP    +  NL++L+L +N++  LP  I     L  L  R N LT
Sbjct: 117 QNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLT 176

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+  NL  NQL   P++I  +  L+ L L  N L   P+EI +L  L
Sbjct: 177 V--LPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENL 234

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALIL---------SDNQLESLPASISNLKMLKSLLL 225
             L L GN L  +P   G L +LE L L           NQL +LPA I  LK L+ L L
Sbjct: 235 QELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSL 294

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
             N+L TLP EI  L    + LKSL L  N+L TLP EI  LK L EL L  N L I
Sbjct: 295 SYNRLATLPREIGQL----QNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTI 347



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 93/234 (39%), Positives = 125/234 (53%), Gaps = 12/234 (5%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLL 113
           +N+  L L  N L+ FP    +   L SLDLS NR+  LP  I     L  L + +N L+
Sbjct: 71  KNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLI 130

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T    PK++  L+NL+  NL  NQL   P++I  +  L+ L L  N L  +P+EI +L  
Sbjct: 131 T---FPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQN 187

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N L  +P   G L  L+ L LS+NQL + P  I  L+ L+ L L+ N+L+TL
Sbjct: 188 LQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTL 247

Query: 234 PTEIITLKCLSEKLK------SLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L+ L EKL       + L   N+L TLP EI  LK L  LSL  N L 
Sbjct: 248 PKEIGQLQKL-EKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLA 300



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/255 (35%), Positives = 127/255 (49%), Gaps = 33/255 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-----------LS 104
           +N+ TL L  N L+ FP    +  NL+ LDL+ N++  LP+ I               ++
Sbjct: 209 QNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQIT 268

Query: 105 TLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHV 164
           TL   N L T   LP ++  LKNL++ +LS N+L   P +I  +  LK L LG N L  +
Sbjct: 269 TLPKGNQLTT---LPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTL 325

Query: 165 PREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLL 224
           PREINKL  L  L L GN LT +P    +L  L  L L +N++ +LP  I   K L+ L 
Sbjct: 326 PREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELN 385

Query: 225 LHNNKLRTLPTEI-------------ITLKCLSEKLKSLL------LHNNKLRTLPTEII 265
           L  N+L TLP EI               +K L  ++ +L       L  NKL ++P EI 
Sbjct: 386 LRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIG 445

Query: 266 TLKCLSELSLRDNPL 280
            L+ L  L L +N L
Sbjct: 446 NLQNLRMLYLENNQL 460



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 84/225 (37%), Positives = 118/225 (52%), Gaps = 7/225 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLL 113
           P N+  L L   N +  P    +  NL+ LDL +N++   P  I     L +L    N L
Sbjct: 47  PLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRL 106

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L+NL+   L  N+L  FP +I  +  L+ L L +N L  +P EI +L  
Sbjct: 107 VM--LPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQN 164

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N LT +P   G L  L+ L L DNQL +LP  I  L+ L++L L  N+L T 
Sbjct: 165 LEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTF 224

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P EI  L    E L+ L L+ N+L+TLP EI  L+ L +L+L  N
Sbjct: 225 PKEIGQL----ENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGN 265



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 86/238 (36%), Positives = 122/238 (51%), Gaps = 31/238 (13%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N L+  P    +  NL++L+L +N++  LP  I     L TL    N LT
Sbjct: 163 QNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLT 222

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL-GN--------NSLNHVP 165
             + PK++  L+NL+  +L+GNQL+  P +I  +  L+ L L GN        N L  +P
Sbjct: 223 --TFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLP 280

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
            EI +L  L +LSL  N L  +P   G L  L++L L  NQL +LP  I+ LK LK L L
Sbjct: 281 AEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYL 340

Query: 226 HNNKLRTLPTEIITLKCL-------------------SEKLKSLLLHNNKLRTLPTEI 264
           + NKL  +P EI  L+ L                   S+ L+ L L  N+L TLP EI
Sbjct: 341 NGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEI 398



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 91/164 (55%), Gaps = 4/164 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++  LKNL+  +L  NQL  FP  I+++  L+ L L  N L  +P EI +L  L  
Sbjct: 62  TLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQE 121

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L   P   G L  L+ L L DNQL +LP  I  L+ L+ L L  N+L  LP E
Sbjct: 122 LGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKE 181

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L    + L++L L +N+L TLP EI  L+ L  L L +N L
Sbjct: 182 IGQL----QNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQL 221



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 83/217 (38%), Positives = 122/217 (56%), Gaps = 7/217 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L+  P    +  NL+ L LS NR+  LP+ I     L +L    N LT  +LP++++ 
Sbjct: 274 NQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLT--TLPREINK 331

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           LKNLK   L+GN+L   P +I ++  L  L L NN ++ +P+EI K   L  L+L GN L
Sbjct: 332 LKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRL 391

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
             +P   G+L  LE L L +N+++ LP  I  L+ L    L  NKL ++P EI  L    
Sbjct: 392 VTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNL---- 447

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           + L+ L L NN+L+TLP ++  L+ L  L+L  NPL+
Sbjct: 448 QNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLL 484



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 120/229 (52%), Gaps = 29/229 (12%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNL 112
           ++P  I +L L +   S FP    +  NLRSL L +               ++L+A    
Sbjct: 519 EQPLKILSLSLEYQQFSLFPKEILRLKNLRSLSLYD---------------TSLVA---- 559

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG-NNSLNHVPREINKL 171
                LPK++  LK+L+  +L  NQL+  P +I  +  L+ L +G NN    +P+EI +L
Sbjct: 560 -----LPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARL 614

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L L  N     P    +L +L  L ++ NQL++LP  I  LK L+ L L +N+L 
Sbjct: 615 QNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLT 674

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           TLP+EI  L  L+E    L L  N+++TLP EI  L+ L +L+L +NP+
Sbjct: 675 TLPSEIGQLHNLTE----LYLQYNRIKTLPEEIARLQNLRKLTLYENPI 719



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 90/168 (53%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  N++V NLSG      P +I  +  L+ L LG+N L   P  I +L K
Sbjct: 36  TYMDLTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQK 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L  +P+  G L  L+ L L  N+L + P  I  L+ L++L L +N+L TL
Sbjct: 96  LESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L+ L EKL    L  N+L  LP EI  L+ L  L+L+DN L 
Sbjct: 156 PVEIGQLQNL-EKLN---LRKNRLTVLPKEIGQLQNLQTLNLQDNQLA 199



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/103 (38%), Positives = 53/103 (51%), Gaps = 11/103 (10%)

Query: 186 DIPDTFGDLYQ-------LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           D P T+ DL +       +  L LS     +LP  I  LK L+ L L +N+L T P  I+
Sbjct: 32  DEPGTYMDLTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIV 91

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L    +KL+SL L  N+L  LP EI  L+ L EL L  N L+
Sbjct: 92  EL----QKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLI 130


>gi|418726603|ref|ZP_13285214.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960513|gb|EKO24267.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 405

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/229 (43%), Positives = 129/229 (56%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+ TL L  N L+  P  + K  NL+ L+LS+N++T LPQ I     L TL  ++N 
Sbjct: 138 KLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQ 197

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +L K++  LKNL+  NLS NQL   PI+I  +  L  L L +N L  +P EI KL 
Sbjct: 198 LT--TLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQ 255

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            LH L+L GN LT +    G L  L+ L L  NQL +L   I  LK L++L L  N+L  
Sbjct: 256 NLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVI 315

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP EI  L+ L E    L L NN+L  LP EI  L+ L  LSL  N L+
Sbjct: 316 LPKEIGQLQNLQE----LNLWNNQLTALPIEIGQLQNLQTLSLYKNRLM 360



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 89/230 (38%), Positives = 123/230 (53%), Gaps = 7/230 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           + P ++  L L   N +  P    K  NL+ L L +NR+  LP+ I     L  L   +N
Sbjct: 45  QNPMDVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSN 104

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT   LPK++  L+NL+  +L  N+L   PI+I  +  L+ LYL +N L  +PRE  KL
Sbjct: 105 QLTI--LPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKL 162

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L+L  N LT +P   G L  L+ L L  NQL +L   I  LK L++L L +N+L 
Sbjct: 163 ENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLT 222

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           TLP EI  L    + L +L L +N+L TLP EI  L+ L  L+L  N L 
Sbjct: 223 TLPIEIGKL----QNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLT 268



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 100/281 (35%), Positives = 140/281 (49%), Gaps = 33/281 (11%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           + ++ LD S  +    TL  +IE         K +N+  L L+ N L   P    +  NL
Sbjct: 48  MDVRVLDLSGQNFT--TLPKEIE---------KLKNLQKLYLFDNRLKTLPKEIGQLKNL 96

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           + L+LS+N++T LP+ I     L  L   +N LT   LP ++  L+NL+   LS NQL  
Sbjct: 97  QELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI--LPIEIGKLQNLQTLYLSSNQLTT 154

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +   +  L+ L L +N L  +P+EI +L  L  L+L  N LT +      L  L+ L
Sbjct: 155 LPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTL 214

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS---------------- 244
            LSDNQL +LP  I  L+ L +L L +N+L TLP EI  L+ L                 
Sbjct: 215 NLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEI 274

Query: 245 ---EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
              + L+ L LH+N+L TL  EI  LK L  LSL  N LVI
Sbjct: 275 GKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVI 315



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 106/190 (55%), Gaps = 3/190 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+       +  NL++L+LS+N++T LP  I     L TL   +N LT
Sbjct: 186 QNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLT 245

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  L+NL   NLSGNQL    I+I  +  L+ L L +N L  + +EI +L  L
Sbjct: 246 --TLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNL 303

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             LSL  N L  +P   G L  L+ L L +NQL +LP  I  L+ L++L L+ N+L T P
Sbjct: 304 QTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFP 363

Query: 235 TEIITLKCLS 244
            EI  LK L 
Sbjct: 364 KEIGQLKNLQ 373



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 67/171 (39%), Positives = 94/171 (54%), Gaps = 4/171 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V +LSG      P +I  +  L+ LYL +N L  +P+EI +L  
Sbjct: 36  TYMDLTKALQNPMDVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNRLKTLPKEIGQLKN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N LT +P   G L  L+ L L DN+L  LP  I  L+ L++L L +N+L TL
Sbjct: 96  LQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRF 284
           P E   L    E L+ L L +N+L TLP EI  L+ L  L+L+ N L   F
Sbjct: 156 PRESGKL----ENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLF 202



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/175 (37%), Positives = 92/175 (52%), Gaps = 5/175 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  P    K  NL +L+LS+N++T LP  I     L TL    N LT
Sbjct: 209 KNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLT 268

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             S+  ++  L+NL+  NL  NQL     +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 269 TLSI--EIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNL 326

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL--HN 227
             L+L  N LT +P   G L  L+ L L  N+L + P  I  LK L++L L  HN
Sbjct: 327 QELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHN 381



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 53/102 (51%), Gaps = 11/102 (10%)

Query: 188 PDTFGDLYQ-------LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           P T+ DL +       +  L LS     +LP  I  LK L+ L L +N+L+TLP EI  L
Sbjct: 34  PGTYMDLTKALQNPMDVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNRLKTLPKEIGQL 93

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           K L E    L L +N+L  LP EI  L+ L  L L DN L I
Sbjct: 94  KNLQE----LNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131


>gi|417765306|ref|ZP_12413270.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352488|gb|EJP04673.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 405

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 99/229 (43%), Positives = 129/229 (56%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+ TL L  N L+  P  + K  NL+ L+LS+N++T LPQ I     L TL  ++N 
Sbjct: 138 KLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQ 197

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +L K++  LKNL+  NLS NQL   PI+I  +  L  L L +N L  +P EI KL 
Sbjct: 198 LT--TLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQ 255

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            LH L+L GN LT +    G L  L+ L L  NQL +L   I  LK L++L L  N+L  
Sbjct: 256 NLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVI 315

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP EI  L+ L E    L L NN+L  LP EI  L+ L  LSL  N L+
Sbjct: 316 LPKEIGQLQNLQE----LNLWNNQLTALPIEIGQLQNLQTLSLYKNRLM 360



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/230 (39%), Positives = 123/230 (53%), Gaps = 7/230 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           + P N+  L L   N +  P    K  NL+ L L +NR+  LP+ I     L  L   +N
Sbjct: 45  QNPLNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSN 104

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT   LPK++  L+NL+  +L  N+L   PI+I  +  L+ LYL +N L  +PRE  KL
Sbjct: 105 QLTI--LPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKL 162

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L+L  N LT +P   G L  L+ L L  NQL +L   I  LK L++L L +N+L 
Sbjct: 163 ENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLT 222

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           TLP EI  L    + L +L L +N+L TLP EI  L+ L  L+L  N L 
Sbjct: 223 TLPIEIGKL----QNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLT 268



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 100/281 (35%), Positives = 141/281 (50%), Gaps = 33/281 (11%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           ++++ LD S  +    TL  +IE         K +N+  L L+ N L   P    +  NL
Sbjct: 48  LNVRVLDLSGQNFT--TLPKKIE---------KLKNLQKLYLFDNRLKTLPKEIGQLKNL 96

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           + L+LS+N++T LP+ I     L  L   +N LT   LP ++  L+NL+   LS NQL  
Sbjct: 97  QELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI--LPIEIGKLQNLQTLYLSSNQLTT 154

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +   +  L+ L L +N L  +P+EI +L  L  L+L  N LT +      L  L+ L
Sbjct: 155 LPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTL 214

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS---------------- 244
            LSDNQL +LP  I  L+ L +L L +N+L TLP EI  L+ L                 
Sbjct: 215 NLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEI 274

Query: 245 ---EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
              + L+ L LH+N+L TL  EI  LK L  LSL  N LVI
Sbjct: 275 GKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVI 315



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 106/190 (55%), Gaps = 3/190 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+       +  NL++L+LS+N++T LP  I     L TL   +N LT
Sbjct: 186 QNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLT 245

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  L+NL   NLSGNQL    I+I  +  L+ L L +N L  + +EI +L  L
Sbjct: 246 --TLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNL 303

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             LSL  N L  +P   G L  L+ L L +NQL +LP  I  L+ L++L L+ N+L T P
Sbjct: 304 QTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFP 363

Query: 235 TEIITLKCLS 244
            EI  LK L 
Sbjct: 364 KEIGQLKNLQ 373



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 94/171 (54%), Gaps = 4/171 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  N++V +LSG      P +I  +  L+ LYL +N L  +P+EI +L  
Sbjct: 36  TYMDLTKALQNPLNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N LT +P   G L  L+ L L DN+L  LP  I  L+ L++L L +N+L TL
Sbjct: 96  LQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRF 284
           P E   L    E L+ L L +N+L TLP EI  L+ L  L+L+ N L   F
Sbjct: 156 PRESGKL----ENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLF 202



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/175 (37%), Positives = 92/175 (52%), Gaps = 5/175 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  P    K  NL +L+LS+N++T LP  I     L TL    N LT
Sbjct: 209 KNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLT 268

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             S+  ++  L+NL+  NL  NQL     +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 269 TLSI--EIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQNL 326

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL--HN 227
             L+L  N LT +P   G L  L+ L L  N+L + P  I  LK L++L L  HN
Sbjct: 327 QELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHN 381



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 53/102 (51%), Gaps = 11/102 (10%)

Query: 188 PDTFGDLYQ-------LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           P T+ DL +       +  L LS     +LP  I  LK L+ L L +N+L+TLP EI  L
Sbjct: 34  PGTYMDLTKALQNPLNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQL 93

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           K L E    L L +N+L  LP EI  L+ L  L L DN L I
Sbjct: 94  KNLQE----LNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131


>gi|359728044|ref|ZP_09266740.1| hypothetical protein Lwei2_14432 [Leptospira weilii str.
           2006001855]
          Length = 456

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 90/218 (41%), Positives = 123/218 (56%), Gaps = 7/218 (3%)

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDM 122
           Y+N L   P    K  NL+ LDL++N++  +P+ I     L  L    N L  +++PK+ 
Sbjct: 129 YNNQLKAIPKEIGKLQNLQKLDLNHNQLKTIPKEIGKLQNLQELGLIGNQL--KTIPKEF 186

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             LK+L+V  LS NQL+  P +  D+ +L+ LYL NN L  +P+EI KL KL  L+L  N
Sbjct: 187 GKLKSLQVLYLSNNQLKTLPKEFGDLKSLQVLYLSNNQLKTLPKEIRKLKKLQELALYNN 246

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            L  +P   G L  L+ L LS NQL+ LP     LK L+ L L N +L T P EI  L+ 
Sbjct: 247 QLKTLPKEIGKLQNLQVLGLSYNQLKKLPKEFGKLKSLQKLYLSNYQLTTFPNEIGELQN 306

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L+E    L L NN+L T P EI  L+ L+EL L +N L
Sbjct: 307 LTE----LYLSNNQLTTFPNEIGELQNLTELYLSNNQL 340



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 131/228 (57%), Gaps = 7/228 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +++  L L +N L   P       +L+ L LSNN++  LP+ I     L  L   NN 
Sbjct: 188 KLKSLQVLYLSNNQLKTLPKEFGDLKSLQVLYLSNNQLKTLPKEIRKLKKLQELALYNNQ 247

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L  ++LPK++  L+NL+V  LS NQL++ P +   + +L+ LYL N  L   P EI +L 
Sbjct: 248 L--KTLPKEIGKLQNLQVLGLSYNQLKKLPKEFGKLKSLQKLYLSNYQLTTFPNEIGELQ 305

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N LT  P+  G+L  L  L LS+NQL++LP  I  LK L+ L+L+NN+L T
Sbjct: 306 NLTELYLSNNQLTTFPNEIGELQNLTELYLSNNQLQALPKKIEKLKNLQVLILNNNQLTT 365

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +P EI  LK     L+ L L+NN+L T+P EI  LK L EL+L  N L
Sbjct: 366 IPNEIGELK----NLQVLTLNNNQLTTIPNEIGELKNLRELNLSRNQL 409



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/230 (38%), Positives = 117/230 (50%), Gaps = 13/230 (5%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENI------DTLLLYHNNLSFFPDNAS 76
            +KTL   +  L S     Q+  L NN     P+ I        L LY+N L   P    
Sbjct: 201 QLKTLPKEFGDLKS----LQVLYLSNNQLKTLPKEIRKLKKLQELALYNNQLKTLPKEIG 256

Query: 77  KFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSG 135
           K  NL+ L LS N++  LP+       L  L   N  LT  + P ++  L+NL    LS 
Sbjct: 257 KLQNLQVLGLSYNQLKKLPKEFGKLKSLQKLYLSNYQLT--TFPNEIGELQNLTELYLSN 314

Query: 136 NQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLY 195
           NQL  FP +I ++  L  LYL NN L  +P++I KL  L VL L  N LT IP+  G+L 
Sbjct: 315 NQLTTFPNEIGELQNLTELYLSNNQLQALPKKIEKLKNLQVLILNNNQLTTIPNEIGELK 374

Query: 196 QLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
            L+ L L++NQL ++P  I  LK L+ L L  N+L+ LP EI  LK L E
Sbjct: 375 NLQVLTLNNNQLTTIPNEIGELKNLRELNLSRNQLQALPKEIGHLKNLQE 424



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 85/201 (42%), Positives = 112/201 (55%), Gaps = 6/201 (2%)

Query: 81  LRSLDLSNNRITH-LPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
           L  L     RI H L +A+ N P    I   N     +LPK++  LK L+  +   NQL+
Sbjct: 76  LSQLKAEEKRIYHNLTEALQN-PTDVQILYLNSNQLITLPKEIGKLKKLRELHSYNNQLK 134

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
             P +I  +  L+ L L +N L  +P+EI KL  L  L L GN L  IP  FG L  L+ 
Sbjct: 135 AIPKEIGKLQNLQKLDLNHNQLKTIPKEIGKLQNLQELGLIGNQLKTIPKEFGKLKSLQV 194

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRT 259
           L LS+NQL++LP    +LK L+ L L NN+L+TLP EI  LK    KL+ L L+NN+L+T
Sbjct: 195 LYLSNNQLKTLPKEFGDLKSLQVLYLSNNQLKTLPKEIRKLK----KLQELALYNNQLKT 250

Query: 260 LPTEIITLKCLSELSLRDNPL 280
           LP EI  L+ L  L L  N L
Sbjct: 251 LPKEIGKLQNLQVLGLSYNQL 271


>gi|427738478|ref|YP_007058022.1| hypothetical protein Riv7116_5077 [Rivularia sp. PCC 7116]
 gi|427373519|gb|AFY57475.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 982

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 93/225 (41%), Positives = 126/225 (56%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ +L L++N LS  P    + TNL++L L NN+++ LP  I     L TL   NN L+ 
Sbjct: 615 NLQSLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLS- 673

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLP ++  L NL+   L  N+L   P +I  +  L+ LYL NN L+ +P EI +L  L 
Sbjct: 674 -SLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQ 732

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L+ +P   G L  L++L L +NQL SLPA I  L  L+SL L NN+L +LP 
Sbjct: 733 SLYLFNNKLSSLPAEIGQLTNLQSLYLFNNQLSSLPAEIGQLTNLQSLYLDNNQLSSLPA 792

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI  L      L+SL L NN+L +LP  I  L  L  L L +N L
Sbjct: 793 EIGQLT----NLQSLYLDNNQLSSLPPGIGQLTNLQTLYLDNNQL 833



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 93/225 (41%), Positives = 124/225 (55%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ +  L +  LS  P N  + TNL+SL LS+N+++ L   I     L +L   NN L+ 
Sbjct: 569 NLQSFYLDNTLLSSLPANIFQLTNLQSLYLSSNQLSILQAEIGQLTNLQSLYLFNNKLS- 627

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLP ++  L NL+   L  N+L   P +I  +  L+ LYL NN L+ +P EI +L  L 
Sbjct: 628 -SLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQ 686

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L+ +P   G L  L+ L L +NQL SLPA I  L  L+SL L NNKL +LP 
Sbjct: 687 TLYLFNNKLSSLPAEIGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPA 746

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI  L      L+SL L NN+L +LP EI  L  L  L L +N L
Sbjct: 747 EIGQLT----NLQSLYLFNNQLSSLPAEIGQLTNLQSLYLDNNQL 787



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 119/225 (52%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ +L L++N LS  P    + TNL+S  L N  ++ LP  I     L +    N LL+ 
Sbjct: 500 NLQSLYLFNNKLSSLPAEIGQLTNLQSFYLYNTLLSSLPAEIGQLTNLQSFYLDNTLLS- 558

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLP ++  L NL+ F L    L   P  I  +  L+ LYL +N L+ +  EI +L  L 
Sbjct: 559 -SLPAEIGQLTNLQSFYLDNTLLSSLPANIFQLTNLQSLYLSSNQLSILQAEIGQLTNLQ 617

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L+ +P   G L  L+ L L +N+L SLPA I  L  L++L L NNKL +LP 
Sbjct: 618 SLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPA 677

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI  L      L++L L NNKL +LP EI  L  L  L L +N L
Sbjct: 678 EIGQLT----NLQTLYLFNNKLSSLPAEIGQLTNLQTLYLDNNQL 718



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 88/209 (42%), Positives = 121/209 (57%), Gaps = 6/209 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ TL L++N LS  P    + TNL++L L NN+++ LP  I     L TL   NN L+ 
Sbjct: 661 NLQTLYLFNNKLSSLPAEIGQLTNLQTLYLFNNKLSSLPAEIGQLTNLQTLYLDNNQLS- 719

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLP ++  L NL+   L  N+L   P +I  +  L+ LYL NN L+ +P EI +L  L 
Sbjct: 720 -SLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQSLYLFNNQLSSLPAEIGQLTNLQ 778

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L+ +P   G L  L++L L +NQL SLP  I  L  L++L L NN+L +LPT
Sbjct: 779 SLYLDNNQLSSLPAEIGQLTNLQSLYLDNNQLSSLPPGIGQLTNLQTLYLDNNQLNSLPT 838

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           EI     L+  LK+LLL  N L++LP EI
Sbjct: 839 EI---GRLNSSLKNLLLDGNPLKSLPPEI 864



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 88/245 (35%), Positives = 116/245 (47%), Gaps = 22/245 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E +  L L  N L+  P    + TNL+SL L NN+++ LP  I     L +L   NN L+
Sbjct: 407 EEVTELDLSANKLTALPPGIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLS 466

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLP ++  L NL+   L  NQL   P +I  +  L+ LYL NN L+ +P EI +L  L
Sbjct: 467 --SLPAEIGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNL 524

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
               L    L+ +P   G L  L++  L +  L SLPA I  L  L+S  L N  L +LP
Sbjct: 525 QSFYLYNTLLSSLPAEIGQLTNLQSFYLDNTLLSSLPAEIGQLTNLQSFYLDNTLLSSLP 584

Query: 235 TEIITLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
             I  L  L                      L+SL L NNKL +LP EI  L  L  L L
Sbjct: 585 ANIFQLTNLQSLYLSSNQLSILQAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQTLYL 644

Query: 276 RDNPL 280
            +N L
Sbjct: 645 FNNKL 649



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 70/171 (40%), Positives = 90/171 (52%), Gaps = 7/171 (4%)

Query: 111 NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
           N LTA  LP  +  L NL+   L  NQL   P +I  +  L+ LYL NN L+ +P EI +
Sbjct: 417 NKLTA--LPPGIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQ 474

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L  L L  N L+ +P   G L  L++L L +N+L SLPA I  L  L+S  L+N  L
Sbjct: 475 LTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQLTNLQSFYLYNTLL 534

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            +LP EI  L      L+S  L N  L +LP EI  L  L    L DN L+
Sbjct: 535 SSLPAEIGQLT----NLQSFYLDNTLLSSLPAEIGQLTNLQSFYL-DNTLL 580



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/157 (42%), Positives = 85/157 (54%), Gaps = 5/157 (3%)

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ +   +LS N+L   P  I  +  L+ LYL NN L+ +P EI +L  L  L L  N L
Sbjct: 406 LEEVTELDLSANKLTALPPGIGQLTNLQSLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKL 465

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           + +P   G L  L+ L L +NQL SLPA I  L  L+SL L NNKL +LP EI  L    
Sbjct: 466 SSLPAEIGQLTNLQTLYLDNNQLSSLPAEIGQLTNLQSLYLFNNKLSSLPAEIGQLT--- 522

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             L+S  L+N  L +LP EI  L  L    L DN L+
Sbjct: 523 -NLQSFYLYNTLLSSLPAEIGQLTNLQSFYL-DNTLL 557


>gi|421127271|ref|ZP_15587495.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136024|ref|ZP_15596135.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019758|gb|EKO86572.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410435361|gb|EKP84493.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 659

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/303 (35%), Positives = 147/303 (48%), Gaps = 37/303 (12%)

Query: 3   YNYGSSSSSDSSDSDSFKTVS----IKTLDFSYSSLDSETLATQIELLPNNDYNKKPENI 58
           Y   +  S   + +D  KT+     ++TLD  Y  L          +LP      + +N+
Sbjct: 25  YELQAEESESGTYTDLAKTLQNPLKVRTLDLRYQKLT---------ILPKEI--GQLQNL 73

Query: 59  DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAES 117
             L L  N+L+  P    +  NL+ LDLS N +T LP+ +     L  L   +  LT  +
Sbjct: 74  QRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLT--T 131

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LPK++  LKNL++  L  NQL   P +I  +  LK L+L NN L  +P EI +L  L +L
Sbjct: 132 LPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQML 191

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            LG N LT +P   G L  L+ L LS NQL  LP  I  L+ L+ L L++ KL TLP EI
Sbjct: 192 DLGNNQLTILPKEIGQLQNLQELYLSYNQLTILPKEIGQLENLQRLNLNSQKLTTLPKEI 251

Query: 238 ITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             L+ L                    E L+ L LH N+L TLP EI  LK L EL L  N
Sbjct: 252 GQLRNLQWLDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSN 311

Query: 279 PLV 281
            L 
Sbjct: 312 KLT 314



 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 97/246 (39%), Positives = 133/246 (54%), Gaps = 15/246 (6%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L+LY+N L+  P    +  NL+ L L+NN++T LP  I     L  L   NN LT
Sbjct: 140 KNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLT 199

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+   LS NQL   P +I  +  L+ L L +  L  +P+EI +L  L
Sbjct: 200 I--LPKEIGQLQNLQELYLSYNQLTILPKEIGQLENLQRLNLNSQKLTTLPKEIGQLRNL 257

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  NSLT +P   G L  L+ L L  N+L +LP  I  LK L+ L L++NKL TLP
Sbjct: 258 QWLDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLP 317

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPS 294
            EI  L+ L E    L LH N+L TLP EI  L+ L  L+L         V+ +T  P  
Sbjct: 318 KEIRQLRNLQE----LDLHRNQLTTLPKEIGQLQNLKTLNL--------IVTQLTTLPKE 365

Query: 295 LLELAS 300
           + EL +
Sbjct: 366 IGELQN 371



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/226 (40%), Positives = 119/226 (52%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  P    +  NL  L L  NRIT LP+ I     L  L    N LT
Sbjct: 416 QNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLGLHQNQLT 475

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+  +L  NQL   P +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 476 --TLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNL 533

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N LT +P     L  L+ L L  N+L +LP  I  L+ L+ L L +N+L TLP
Sbjct: 534 RVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLMTLP 593

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L+ L E    L L  N+L T P EI  LK L EL L  NPL
Sbjct: 594 KEIGQLQNLQE----LCLDENQLTTFPKEIRQLKNLQELHLYLNPL 635



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 89/232 (38%), Positives = 126/232 (54%), Gaps = 11/232 (4%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           ++  N+  L L+ N L+  P    +  NL++L+L   ++T LP+ I     L TL    N
Sbjct: 321 RQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTL----N 376

Query: 112 LLTAE--SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREIN 169
           L+  +  +LPK++  L+NLK  NL   QL   P +I ++  LK L L +N L  +P+EI 
Sbjct: 377 LIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIG 436

Query: 170 KLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           +L  L +L L  N +T +P   G L  L+ L L  NQL +LP  I  L+ L+ L LH N+
Sbjct: 437 ELQNLEILVLRENRITALPKEIGQLQNLQWLGLHQNQLTTLPKEIGQLQNLQRLDLHQNQ 496

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L TLP EI  L+ L E    L L  N+L TLP EI  L+ L  L L +N L 
Sbjct: 497 LTTLPKEIGQLQNLQE----LCLDENQLTTLPKEIEQLQNLRVLDLDNNQLT 544



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 126/227 (55%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L    L+  P    +  NL++L+L   ++T LP+ I     L TL   +N LT
Sbjct: 370 QNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLT 429

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL++  L  N++   P +I  +  L++L L  N L  +P+EI +L  L
Sbjct: 430 --TLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLGLHQNQLTTLPKEIGQLQNL 487

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L+ L L +NQL +LP  I  L+ L+ L L NN+L TLP
Sbjct: 488 QRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLP 547

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            E++ L+     L+ L L +N+L TLP EI  L+ L  L L  N L+
Sbjct: 548 KEVLRLQS----LQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLM 590



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 118/226 (52%), Gaps = 7/226 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L  N+L+  P    +  NL+ LDL  NR+  LP  I     L  L   +N LT 
Sbjct: 256 NLQWLDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLT- 314

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LPK++  L+NL+  +L  NQL   P +I  +  LK L L    L  +P+EI +L  L 
Sbjct: 315 -TLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLK 373

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L+L    LT +P   G+L  L+ L L   QL +LP  I  L+ LK+L L +N+L TLP 
Sbjct: 374 TLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPK 433

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           EI  L    + L+ L+L  N++  LP EI  L+ L  L L  N L 
Sbjct: 434 EIGEL----QNLEILVLRENRITALPKEIGQLQNLQWLGLHQNQLT 475



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 123/227 (54%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L +N L+  P    +  NL+ L+L++ ++T LP+ I     L  L    N LT
Sbjct: 209 QNLQELYLSYNQLTILPKEIGQLENLQRLNLNSQKLTTLPKEIGQLRNLQWLDLSFNSLT 268

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+  +L  N+L   P++I  +  L+ L L +N L  +P+EI +L  L
Sbjct: 269 --TLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNL 326

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L+ L L   QL +LP  I  L+ LK+L L   +L TLP
Sbjct: 327 QELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLIVTQLTTLP 386

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L    + LK+L L   +L TLP EI  L+ L  L+L DN L 
Sbjct: 387 KEIGEL----QNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLT 429



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 91/191 (47%), Gaps = 9/191 (4%)

Query: 146 LDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDN 205
           L + TL   Y     L  +P+EI +L  L  L L  NSLT +P   G L  L+ L LS N
Sbjct: 48  LKVRTLDLRY---QKLTILPKEIGQLQNLQRLDLSFNSLTTLPKEIGQLRNLQELDLSFN 104

Query: 206 QLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
            L +LP  +  L+ L+ L L++ KL TLP EI  LK     L+ L+L+ N+L  LP EI 
Sbjct: 105 SLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLK----NLQLLILYYNQLTALPKEIG 160

Query: 266 TLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLES 325
            LK L  L L +N L          K   +L+L +  L +   +  Q    Q L  YL  
Sbjct: 161 QLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQEL--YLSY 218

Query: 326 AHHCVNPKCKG 336
               + PK  G
Sbjct: 219 NQLTILPKEIG 229


>gi|455789506|gb|EMF41432.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 358

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/229 (41%), Positives = 125/229 (54%), Gaps = 7/229 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L++N L        +  NL+ L L NN++T L + I     L +L   NN LT
Sbjct: 119 QNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLT 178

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+NL+   LS NQL  FP +I  +  L++L LG+N L  +P EI KL KL
Sbjct: 179 --TFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKL 236

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N LT IP   G L  L+ L LS NQ +++P     LK LK L L  N+L  LP
Sbjct: 237 QELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALP 296

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
            EI  LK     LK L L  N+L T+P EI  L+ L  L LR+N L I 
Sbjct: 297 KEIGKLK----NLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQLSIE 341



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/222 (41%), Positives = 120/222 (54%), Gaps = 7/222 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L +N L+  P    +  NL+ L+L NN++  + + I     L  L   NN LTA  L 
Sbjct: 101 LYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTA--LS 158

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
           K++  L+NLK   LS NQL  FP +I  +  L+ LYL NN L   P+EI KL KL  L L
Sbjct: 159 KEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGL 218

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
           G N LT IP+  G L +L+ L L  NQL ++P  I  L+ L+ L L  N+ +T+P E   
Sbjct: 219 GDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQ 278

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LK     LK L L  N+L  LP EI  LK L  L+L  N L 
Sbjct: 279 LK----NLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLT 316



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/227 (37%), Positives = 111/227 (48%), Gaps = 28/227 (12%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLT 114
           P ++  L+L    L   P+   +  NL+ LDLS+N++                       
Sbjct: 26  PLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLI---------------------- 63

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  LKNL+   L+ NQL  FP +I  + +L  LYL NN L  +P EI +L  L
Sbjct: 64  --ILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNL 121

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N L  I      L  L+ L L +NQL +L   I  L+ LKSL L NN+L T P
Sbjct: 122 QELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFP 181

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L+ L E    L L NN+L T P EI  L+ L  L L DN L 
Sbjct: 182 KEIGKLQNLQE----LYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLT 224



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/183 (37%), Positives = 90/183 (49%), Gaps = 19/183 (10%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           L K   N  +++V  LS  +L+  P +I  +  L+ L L +N L  +P+EI +L  L  L
Sbjct: 19  LTKAFQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQEL 78

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            L  N LT  P     L  L  L LS+NQL  LP  I  L+ L+ L L NN+L+T+  EI
Sbjct: 79  FLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEI 138

Query: 238 ITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             LK L                    + LKSL L NN+L T P EI  L+ L EL L +N
Sbjct: 139 EQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNN 198

Query: 279 PLV 281
            L 
Sbjct: 199 QLT 201



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 66/133 (49%), Gaps = 3/133 (2%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K + +  L L  N L+  P+   K   L+ L+L  N++T +P+ I     L  L    N 
Sbjct: 209 KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYN- 267

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
              +++P +   LKNLK+ +L  NQL   P +I  +  LK L L  N L  +P+EI +L 
Sbjct: 268 -QFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQLQ 326

Query: 173 KLHVLSLGGNSLT 185
            L  L L  N L+
Sbjct: 327 NLQTLYLRNNQLS 339



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 54/97 (55%), Gaps = 4/97 (4%)

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           D+   F +   +  LILS+ +L+ LP  I  LK L+ L L +N+L  LP EI  LK L E
Sbjct: 18  DLTKAFQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQE 77

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
               L L+ N+L T P EI  LK L +L L +N L I
Sbjct: 78  ----LFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTI 110



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 63/117 (53%), Gaps = 11/117 (9%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLP---QAITNFPLSTLIARNNLLTAESLPKDM 122
           N L+  P    +  NL+ L LS N+   +P     + N  + +L A  N LTA  LPK++
Sbjct: 244 NQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDA--NQLTA--LPKEI 299

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INKL---CKLH 175
             LKNLK+ NL  NQL   P +I  +  L+ LYL NN L+   +E I KL   C+++
Sbjct: 300 GKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQLSIEEKERIRKLLPKCQIY 356


>gi|421111699|ref|ZP_15572172.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410802895|gb|EKS09040.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 360

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/309 (35%), Positives = 151/309 (48%), Gaps = 28/309 (9%)

Query: 24  IKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRS 83
           ++ LD  Y+ L   TL  +I  L          N+ +L LY N LS  P+      NL+ 
Sbjct: 70  LRKLDLRYNQLT--TLPKEIGQL---------HNLQSLSLYGNLLSTLPEEIGHLKNLKE 118

Query: 84  LDLSNNRITHLPQAITNFP----------LSTLIARNNLLTAESLPKDMSNLKNLKVFNL 133
           L LS+N +  LP+ I              L +LI R+  +    + +++ +L+NLK  NL
Sbjct: 119 LSLSHNLLITLPENIGRLQNLEVLDLSVNLRSLIFRSEEI---GISEEIGDLQNLKELNL 175

Query: 134 SGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGD 193
           +GN+L   P +I  + +L+ L L  NSL  +P+EI +L  L  LSL GN LT  P   G 
Sbjct: 176 TGNRLTTLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQNLKRLSLKGNRLTTFPKEIGK 235

Query: 194 LYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLH 253
           L  LE L LS+N L +LP  I  LK L+ L L  N+L TLP EI  LK L E    L L 
Sbjct: 236 LQSLEKLDLSNNSLSTLPKEIGRLKNLRELSLEGNRLSTLPKEIGRLKNLKE----LSLG 291

Query: 254 NNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQE 313
            N+L TLP EI   + L EL L  N L          +    L L+   L V+E    Q+
Sbjct: 292 GNRLTTLPKEIGKFQNLIELRLEGNRLTTLPKGIAKLQSLWSLNLSKNPLSVYEKKRIQK 351

Query: 314 HLPQNLVQY 322
             P+  V +
Sbjct: 352 WFPEFGVDF 360



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 96/237 (40%), Positives = 122/237 (51%), Gaps = 15/237 (6%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           +KP ++  L L    +   P   +   NLR LDL  N++T LP+ I     L +L    N
Sbjct: 42  QKPSDVHILSLSGQEIKNLPRQIANLKNLRKLDLRYNQLTTLPKEIGQLHNLQSLSLYGN 101

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPR----- 166
           LL+  +LP+++ +LKNLK  +LS N L   P  I  +  L+ L L  N  + + R     
Sbjct: 102 LLS--TLPEEIGHLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSVNLRSLIFRSEEIG 159

Query: 167 ---EINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL 223
              EI  L  L  L+L GN LT +P   G L  LE L LS+N L  LP  I  L+ LK L
Sbjct: 160 ISEEIGDLQNLKELNLTGNRLTTLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQNLKRL 219

Query: 224 LLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            L  N+L T P EI  L+ L EKL    L NN L TLP EI  LK L ELSL  N L
Sbjct: 220 SLKGNRLTTFPKEIGKLQSL-EKLD---LSNNSLSTLPKEIGRLKNLRELSLEGNRL 272



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 62/158 (39%), Positives = 89/158 (56%), Gaps = 6/158 (3%)

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
           + +LSG +++  P QI ++  L+ L L  N L  +P+EI +L  L  LSL GN L+ +P+
Sbjct: 49  ILSLSGQEIKNLPRQIANLKNLRKLDLRYNQLTTLPKEIGQLHNLQSLSLYGNLLSTLPE 108

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL---PTEIITLKCLS-- 244
             G L  L+ L LS N L +LP +I  L+ L+ L L  N LR+L     EI   + +   
Sbjct: 109 EIGHLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSVN-LRSLIFRSEEIGISEEIGDL 167

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           + LK L L  N+L TLP EI  L+ L +L L +N L I
Sbjct: 168 QNLKELNLTGNRLTTLPKEIGKLQSLEKLDLSENSLAI 205


>gi|418752849|ref|ZP_13309106.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409966801|gb|EKO34641.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 398

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 96/231 (41%), Positives = 134/231 (58%), Gaps = 9/231 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNN 111
           K +N+  L L HN L+  P    +  NL+ L+L++N++T L + I N   L TL + RN 
Sbjct: 157 KLQNLQKLDLSHNQLTTLPKEIGQLQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQ 216

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
           L T   LP+++ NL+NL+  +L  NQL   P +I ++  L+ L LG N L  +P EI  L
Sbjct: 217 LTT---LPEEIWNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEEIGNL 273

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L L GN L  +P+  G+L  L+ L L  NQL +LP  I  L+ LK L L+NN+L 
Sbjct: 274 QNLQTLDLEGNQLATLPEEIGNLQNLQKLDLEGNQLTTLPKEIGKLQKLKKLYLYNNRLT 333

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           TLP EI  L    +KL++L L +N+L TLP EI  L+ L  L L  NP +I
Sbjct: 334 TLPIEIGNL----QKLQTLSLGHNQLTTLPKEIGNLQKLKMLDLGGNPSLI 380



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 95/165 (57%), Gaps = 4/165 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++  L+NL+  +LS NQL   P +I  +  L+ L L +N L  +P+EI +L  L  
Sbjct: 127 TLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQLQNLQK 186

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+L  N LT +    G+L  L+ L L  NQL +LP  I NL+ L++L L  N+L TLP E
Sbjct: 187 LNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNLQNLQTLDLGRNQLTTLPEE 246

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I  L    + L++L L  N+L TLP EI  L+ L  L L  N L 
Sbjct: 247 IWNL----QNLQTLDLGRNQLTTLPEEIGNLQNLQTLDLEGNQLA 287



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/148 (40%), Positives = 80/148 (54%), Gaps = 4/148 (2%)

Query: 134 SGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGD 193
           S + L   P +I  +  L+ L L +N L  +P+EI KL  L  L L  N LT +P   G 
Sbjct: 121 SNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLDLSHNQLTTLPKEIGQ 180

Query: 194 LYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLH 253
           L  L+ L L+ NQL +L   I NL+ L++L L  N+L TLP EI  L    + L++L L 
Sbjct: 181 LQNLQKLNLNSNQLTTLSKEIGNLQNLQTLDLGRNQLTTLPEEIWNL----QNLQTLDLG 236

Query: 254 NNKLRTLPTEIITLKCLSELSLRDNPLV 281
            N+L TLP EI  L+ L  L L  N L 
Sbjct: 237 RNQLTTLPEEIWNLQNLQTLDLGRNQLT 264


>gi|429961316|gb|ELA40861.1| hypothetical protein VICG_02102 [Vittaforma corneae ATCC 50505]
          Length = 418

 Score =  130 bits (327), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 110/297 (37%), Positives = 148/297 (49%), Gaps = 41/297 (13%)

Query: 8   SSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNN 67
           S    S DSD  + V ++ LD S ++L  ETL  +I  L         +++  L L  N 
Sbjct: 53  SQGITSIDSDIKRLVKLEKLDLSVNNL--ETLPPEIGEL---------KDLKMLYLNGNE 101

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           L   P    +   L+ L L NN++  LP  I     L  L    N L  E+LP ++  L+
Sbjct: 102 LGTLPPEIRRLEKLQCLYLRNNKLKLLPIEIGELKNLQALDLNGNKL--ETLPAEIGELE 159

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLN-----------------------H 163
           NL+  +L+GN+LE  P++I ++  L+YL LGNN L                         
Sbjct: 160 NLQYLDLNGNELETLPLEIGELKNLRYLNLGNNKLGILSTVIKKLKNLEILCLSNNEFEL 219

Query: 164 VPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL 223
           +P EI +L KL  L L GN L  +P     L  L+ L L+ N+LE+LPA I  LK LK+L
Sbjct: 220 LPSEIVELEKLQCLYLHGNKLKLLPIEIEGLENLQELDLNGNELETLPAVIWKLKNLKTL 279

Query: 224 LLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
               NKL TLP EI+ L    EKL+ L LH NKL+ LP EI  L+ L EL L  N L
Sbjct: 280 RFGYNKLETLPVEIVEL----EKLQFLYLHGNKLKLLPIEIEGLENLQELDLNGNEL 332



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 74/182 (40%), Positives = 92/182 (50%), Gaps = 3/182 (1%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L +N L        K  NL  L LSNN    LP  I     L  L    N L  
Sbjct: 183 NLRYLNLGNNKLGILSTVIKKLKNLEILCLSNNEFELLPSEIVELEKLQCLYLHGNKLKL 242

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP ++  L+NL+  +L+GN+LE  P  I  +  LK L  G N L  +P EI +L KL 
Sbjct: 243 --LPIEIEGLENLQELDLNGNELETLPAVIWKLKNLKTLRFGYNKLETLPVEIVELEKLQ 300

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L GN L  +P     L  L+ L L+ N+LE+LP  I  LK LK+L L  NKL TLP 
Sbjct: 301 FLYLHGNKLKLLPIEIEGLENLQELDLNGNELETLPLEIGELKNLKTLRLCYNKLETLPV 360

Query: 236 EI 237
           EI
Sbjct: 361 EI 362


>gi|421119262|ref|ZP_15579586.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347892|gb|EKO98743.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 738

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 98/237 (41%), Positives = 124/237 (52%), Gaps = 16/237 (6%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L  FP    +  NL++L+L +N++  LP  I     L  L  R N LT
Sbjct: 117 QNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGRLQNLEKLNLRKNRLT 176

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+  NL  NQL   P++I  +  L+ L L  N L   P+EI +L  L
Sbjct: 177 V--LPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENL 234

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALIL---------SDNQLESLPASISNLKMLKSLLL 225
             L L GN L  +P   G L +LE L L           NQL +LPA I  LK L+ L L
Sbjct: 235 QELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSL 294

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
             N+L TLP EI  L    + LKSL L  N+L TLP EI  LK L EL L  N L I
Sbjct: 295 SYNRLATLPREIGQL----QNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTI 347



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 101/268 (37%), Positives = 139/268 (51%), Gaps = 23/268 (8%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           ++++ LD S  +    TL  +IE L         +N+  L L  N L+ FP    +   L
Sbjct: 48  LNVRILDLSGQNFT--TLPKEIEQL---------KNLQELDLGDNQLATFPAVIVELQKL 96

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
            SLDLS NR+  LP  I     L  L + +N L+T    PK++  L+NL+  NL  NQL 
Sbjct: 97  ESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLIT---FPKEIGQLQNLQTLNLQDNQLA 153

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
             P++I  +  L+ L L  N L  +P+EI +L  L  L+L  N L  +P   G L  L+ 
Sbjct: 154 TLPVEIGRLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQT 213

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLK------SLLLH 253
           L LS+NQL + P  I  L+ L+ L L+ N+L+TLP EI  L+ L EKL       + L  
Sbjct: 214 LGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKL-EKLNLDGNQITTLPK 272

Query: 254 NNKLRTLPTEIITLKCLSELSLRDNPLV 281
            N+L TLP EI  LK L  LSL  N L 
Sbjct: 273 GNQLTTLPAEIGQLKNLQILSLSYNRLA 300



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/255 (35%), Positives = 127/255 (49%), Gaps = 33/255 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-----------LS 104
           +N+ TL L  N L+ FP    +  NL+ LDL+ N++  LP+ I               ++
Sbjct: 209 QNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQIT 268

Query: 105 TLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHV 164
           TL   N L T   LP ++  LKNL++ +LS N+L   P +I  +  LK L LG N L  +
Sbjct: 269 TLPKGNQLTT---LPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTL 325

Query: 165 PREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLL 224
           PREINKL  L  L L GN LT +P    +L  L  L L +N++ +LP  I   K L+ L 
Sbjct: 326 PREINKLKNLKELYLNGNKLTIVPKEIWELENLTILQLKNNRISTLPKEIEKSKNLQELN 385

Query: 225 LHNNKLRTLPTEI-------------ITLKCLSEKLKSLL------LHNNKLRTLPTEII 265
           L  N+L TLP EI               +K L  ++ +L       L  NKL ++P EI 
Sbjct: 386 LRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIG 445

Query: 266 TLKCLSELSLRDNPL 280
            L+ L  L L +N L
Sbjct: 446 NLQNLRMLYLENNQL 460



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 84/225 (37%), Positives = 118/225 (52%), Gaps = 7/225 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLL 113
           P N+  L L   N +  P    +  NL+ LDL +N++   P  I     L +L    N L
Sbjct: 47  PLNVRILDLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRL 106

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L+NL+   L  N+L  FP +I  +  L+ L L +N L  +P EI +L  
Sbjct: 107 VM--LPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGRLQN 164

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N LT +P   G L  L+ L L DNQL +LP  I  L+ L++L L  N+L T 
Sbjct: 165 LEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTF 224

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P EI  L    E L+ L L+ N+L+TLP EI  L+ L +L+L  N
Sbjct: 225 PKEIGQL----ENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGN 265



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 86/238 (36%), Positives = 122/238 (51%), Gaps = 31/238 (13%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N L+  P    +  NL++L+L +N++  LP  I     L TL    N LT
Sbjct: 163 QNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLT 222

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL-GN--------NSLNHVP 165
             + PK++  L+NL+  +L+GNQL+  P +I  +  L+ L L GN        N L  +P
Sbjct: 223 --TFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLP 280

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
            EI +L  L +LSL  N L  +P   G L  L++L L  NQL +LP  I+ LK LK L L
Sbjct: 281 AEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYL 340

Query: 226 HNNKLRTLPTEIITLKCL-------------------SEKLKSLLLHNNKLRTLPTEI 264
           + NKL  +P EI  L+ L                   S+ L+ L L  N+L TLP EI
Sbjct: 341 NGNKLTIVPKEIWELENLTILQLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEI 398



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 83/217 (38%), Positives = 122/217 (56%), Gaps = 7/217 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L+  P    +  NL+ L LS NR+  LP+ I     L +L    N LT  +LP++++ 
Sbjct: 274 NQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLT--TLPREINK 331

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           LKNLK   L+GN+L   P +I ++  L  L L NN ++ +P+EI K   L  L+L GN L
Sbjct: 332 LKNLKELYLNGNKLTIVPKEIWELENLTILQLKNNRISTLPKEIEKSKNLQELNLRGNRL 391

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
             +P   G+L  LE L L +N+++ LP  I  L+ L    L  NKL ++P EI  L    
Sbjct: 392 VTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNL---- 447

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           + L+ L L NN+L+TLP ++  L+ L  L+L  NPL+
Sbjct: 448 QNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLL 484



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 78/229 (34%), Positives = 119/229 (51%), Gaps = 29/229 (12%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNL 112
           ++P  I +L L +   S FP    +  NLRSL L +               ++L+A    
Sbjct: 519 EQPLKILSLSLEYQQFSLFPKEILRLKNLRSLSLYD---------------TSLVA---- 559

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG-NNSLNHVPREINKL 171
                LPK++  LK+L+  +L  NQL+  P +I  +  L+ L +G NN    +P+EI +L
Sbjct: 560 -----LPKEIVRLKHLEHLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARL 614

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L L  N     P    +L +L  L ++ NQL++LP  I  LK L+ L L +N+L 
Sbjct: 615 QNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLT 674

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           TLP+EI  L  L+E    L L  N+++ LP EI  L+ L +L+L +NP+
Sbjct: 675 TLPSEIGQLHNLTE----LYLQYNRIKMLPEEIARLQNLRKLTLYENPI 719



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 90/168 (53%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  N+++ +LSG      P +I  +  L+ L LG+N L   P  I +L K
Sbjct: 36  TYMDLTKALQNPLNVRILDLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQK 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L  +P+  G L  L+ L L  N+L + P  I  L+ L++L L +N+L TL
Sbjct: 96  LESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L+ L EKL    L  N+L  LP EI  L+ L  L+L+DN L 
Sbjct: 156 PVEIGRLQNL-EKLN---LRKNRLTVLPKEIGQLQNLQTLNLQDNQLA 199



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 81/235 (34%), Positives = 114/235 (48%), Gaps = 20/235 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           EN+  L L +N +S  P    K  NL+ L+L  NR+  LP  I                 
Sbjct: 356 ENLTILQLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEI-GELKLLEELNLENNRI 414

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           + LP ++  L+NL +FNLSGN+L   P +I ++  L+ LYL NN L  +PR++ KL  L 
Sbjct: 415 KILPNEIGALENLWIFNLSGNKLASIPKEIGNLQNLRMLYLENNQLKTLPRQMEKLQDLE 474

Query: 176 VLSLGGNSLTD---------IPDTFGDLYQLEALILSDNQLESLPASISN-LKMLKSLLL 225
           VL+L  N L           +P+   DL  +E          +L  ++   LK+L SL L
Sbjct: 475 VLNLLINPLLSEERKKIQALLPNCNIDLRDVE----EGGTYRNLNLALEQPLKIL-SLSL 529

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
              +    P EI+ LK     L+SL L++  L  LP EI+ LK L  LSL  N L
Sbjct: 530 EYQQFSLFPKEILRLK----NLRSLSLYDTSLVALPKEIVRLKHLEHLSLGLNQL 580



 Score = 47.0 bits (110), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 52/101 (51%), Gaps = 11/101 (10%)

Query: 188 PDTFGDLYQ-------LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           P T+ DL +       +  L LS     +LP  I  LK L+ L L +N+L T P  I+ L
Sbjct: 34  PGTYMDLTKALQNPLNVRILDLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVEL 93

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
               +KL+SL L  N+L  LP EI  L+ L EL L  N L+
Sbjct: 94  ----QKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLI 130


>gi|255081704|ref|XP_002508074.1| predicted protein [Micromonas sp. RCC299]
 gi|226523350|gb|ACO69332.1| predicted protein [Micromonas sp. RCC299]
          Length = 344

 Score =  130 bits (326), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 97/260 (37%), Positives = 135/260 (51%), Gaps = 18/260 (6%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
            S++ LD S + L S  L  +I LL           +  L LY N L+  P    + T+L
Sbjct: 75  ASLRVLDLSDNQLTS--LPAEIGLLTA---------LQELYLYGNQLTSVPAEIWQLTSL 123

Query: 82  RSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           R L L +N +T +P  I     L  L   +N LT  S+P ++  L +L    LSGN+L  
Sbjct: 124 RKLLLDDNELTSVPAEIGQLTSLEVLGLTDNQLT--SVPAEIGQLASLTESGLSGNRLAS 181

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +I  + +L  L+L  N L  VP EI +L  L  L L  N LT +P+  G L  L  L
Sbjct: 182 VPAEIGLLASLTELFLSGNQLTSVPAEIGQLTSLQELWLDDNELTSVPEETGQLASLMVL 241

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L DN+L S+PA +  L  LKSL L+ N+L ++P EI  L  L+E    L L +N+L ++
Sbjct: 242 SLRDNELTSVPAEVGQLTSLKSLYLYGNQLTSVPAEIGQLTLLTE----LFLDDNELTSV 297

Query: 261 PTEIITLKCLSELSLRDNPL 280
           P EI  L+ L +L L DN L
Sbjct: 298 PAEIGQLRSLEKLYLDDNKL 317



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/234 (38%), Positives = 121/234 (51%), Gaps = 9/234 (3%)

Query: 69  SFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKN 127
           +  P    + + LR L++S N +T LP  I     L  L    N LT  S+P ++  L +
Sbjct: 19  AALPAELGRLSALRELNVSRNALTLLPVEIGQLTSLVKLSLTENQLT--SVPAEIGQLAS 76

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           L+V +LS NQL   P +I  +  L+ LYL  N L  VP EI +L  L  L L  N LT +
Sbjct: 77  LRVLDLSDNQLTSLPAEIGLLTALQELYLYGNQLTSVPAEIWQLTSLRKLLLDDNELTSV 136

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
           P   G L  LE L L+DNQL S+PA I  L  L    L  N+L ++P EI  L  L+E  
Sbjct: 137 PAEIGQLTSLEVLGLTDNQLTSVPAEIGQLASLTESGLSGNRLASVPAEIGLLASLTE-- 194

Query: 248 KSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASR 301
             L L  N+L ++P EI  L  L EL L DN L    V + T +  SL+ L+ R
Sbjct: 195 --LFLSGNQLTSVPAEIGQLTSLQELWLDDNELT--SVPEETGQLASLMVLSLR 244



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 119/242 (49%), Gaps = 30/242 (12%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI----------------TNFP---- 102
           L  N L+  P    +  +LR LDLS+N++T LP  I                T+ P    
Sbjct: 59  LTENQLTSVPAEIGQLASLRVLDLSDNQLTSLPAEIGLLTALQELYLYGNQLTSVPAEIW 118

Query: 103 ----LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L  L+  +N LT  S+P ++  L +L+V  L+ NQL   P +I  + +L    L  
Sbjct: 119 QLTSLRKLLLDDNELT--SVPAEIGQLTSLEVLGLTDNQLTSVPAEIGQLASLTESGLSG 176

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  VP EI  L  L  L L GN LT +P   G L  L+ L L DN+L S+P     L 
Sbjct: 177 NRLASVPAEIGLLASLTELFLSGNQLTSVPAEIGQLTSLQELWLDDNELTSVPEETGQLA 236

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L  L L +N+L ++P E+  L      LKSL L+ N+L ++P EI  L  L+EL L DN
Sbjct: 237 SLMVLSLRDNELTSVPAEVGQLTS----LKSLYLYGNQLTSVPAEIGQLTLLTELFLDDN 292

Query: 279 PL 280
            L
Sbjct: 293 EL 294



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/207 (33%), Positives = 101/207 (48%), Gaps = 28/207 (13%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESL 118
           LLL  N L+  P    + T+L  L L++N++T +P  I        + ++ N L    S+
Sbjct: 126 LLLDDNELTSVPAEIGQLTSLEVLGLTDNQLTSVPAEIGQLASLTESGLSGNRL---ASV 182

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P ++  L +L    LSGNQL   P +I  + +L+ L+L +N L  VP E  +L  L VLS
Sbjct: 183 PAEIGLLASLTELFLSGNQLTSVPAEIGQLTSLQELWLDDNELTSVPEETGQLASLMVLS 242

Query: 179 LG-----------------------GNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           L                        GN LT +P   G L  L  L L DN+L S+PA I 
Sbjct: 243 LRDNELTSVPAEVGQLTSLKSLYLYGNQLTSVPAEIGQLTLLTELFLDDNELTSVPAEIG 302

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKC 242
            L+ L+ L L +NKL ++P EI  L+ 
Sbjct: 303 QLRSLEKLYLDDNKLTSVPAEIRELRA 329



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 92/169 (54%), Gaps = 5/169 (2%)

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LTA +LP ++  L  L+  N+S N L   P++I  + +L  L L  N L  VP EI +L 
Sbjct: 17  LTA-ALPAELGRLSALRELNVSRNALTLLPVEIGQLTSLVKLSLTENQLTSVPAEIGQLA 75

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L VL L  N LT +P   G L  L+ L L  NQL S+PA I  L  L+ LLL +N+L +
Sbjct: 76  SLRVLDLSDNQLTSLPAEIGLLTALQELYLYGNQLTSVPAEIWQLTSLRKLLLDDNELTS 135

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +P EI  L      L+ L L +N+L ++P EI  L  L+E  L  N L 
Sbjct: 136 VPAEIGQLTS----LEVLGLTDNQLTSVPAEIGQLASLTESGLSGNRLA 180


>gi|418755283|ref|ZP_13311490.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964294|gb|EKO32184.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 557

 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/227 (40%), Positives = 125/227 (55%), Gaps = 7/227 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L  N     P    +  NL  LD+SNN++  LP  I     L  L   +N 
Sbjct: 289 KLQNLKDLYLGDNQFRTLPKEIDQLQNLEGLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQ 348

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT   LP+++  L+NL+   LS NQL   P +I  +  L+YL L NN L  +P+EI  L 
Sbjct: 349 LTV--LPQEIGQLENLESLILSNNQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGTLQ 406

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           +L  L+L  N L  +P     L  LE LILS+N+L++LP  I  L+ L+ L L NNKL +
Sbjct: 407 ELEWLNLEHNQLAALPQEIDQLQNLEDLILSNNRLKTLPKEIWKLRKLEWLYLKNNKLGS 466

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           LP EI  L    + L+ L L NN+LRTLP EI  L+ L +L L  NP
Sbjct: 467 LPKEIDQL----QNLEYLDLSNNQLRTLPNEIGQLQSLEDLDLSGNP 509



 Score =  127 bits (320), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 127/228 (55%), Gaps = 7/228 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K + ++ L L +N L   P        LR L L NNR+  LP+ I     L  L   +N 
Sbjct: 243 KLQKLEVLCLKNNKLGSLPQEIGTLRRLRFLSLVNNRLKTLPREIWKLQNLKDLYLGDN- 301

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
               +LPK++  L+NL+  ++S NQL   P +I  +  LK+LYL +N L  +P+EI +L 
Sbjct: 302 -QFRTLPKEIDQLQNLEGLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVLPQEIGQLE 360

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N LT +P   G L +L+ L LS+NQL +LP  I  L+ L+ L L +N+L  
Sbjct: 361 NLESLILSNNQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEHNQLAA 420

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           LP EI  L    + L+ L+L NN+L+TLP EI  L+ L  L L++N L
Sbjct: 421 LPQEIDQL----QNLEDLILSNNRLKTLPKEIWKLRKLEWLYLKNNKL 464



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 90/226 (39%), Positives = 123/226 (54%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           + ++ L L +N L   P+   K   L  L+L +N++  L Q I     L  L   NN LT
Sbjct: 176 QKLEWLSLKNNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTLQKLEWLSLENNQLT 235

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP+++  L+ L+V  L  N+L   P +I  +  L++L L NN L  +PREI KL  L
Sbjct: 236 V--LPQEIGKLQKLEVLCLKNNKLGSLPQEIGTLRRLRFLSLVNNRLKTLPREIWKLQNL 293

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L LG N    +P     L  LE L +S+NQL +LP  I  L+ LK L L +N+L  LP
Sbjct: 294 KDLYLGDNQFRTLPKEIDQLQNLEGLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVLP 353

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L    E L+SL+L NN+L TLP EI TL+ L  L+L +N L
Sbjct: 354 QEIGQL----ENLESLILSNNQLTTLPQEIGTLQKLQYLNLSNNQL 395



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 123/228 (53%), Gaps = 7/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           + ++ L L +N L   P+   K   L  L+L +N++  L Q I     L  L  +NN L 
Sbjct: 130 QKLEWLSLKNNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTLQKLEWLSLKNNRL- 188

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            ESLP  +  L+ L+  NL  NQL     +I  +  L++L L NN L  +P+EI KL KL
Sbjct: 189 -ESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTLQKLEWLSLENNQLTVLPQEIGKLQKL 247

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N L  +P   G L +L  L L +N+L++LP  I  L+ LK L L +N+ RTLP
Sbjct: 248 EVLCLKNNKLGSLPQEIGTLRRLRFLSLVNNRLKTLPREIWKLQNLKDLYLGDNQFRTLP 307

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            EI  L    + L+ L + NN+L TLP EI  L+ L  L L DN L +
Sbjct: 308 KEIDQL----QNLEGLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTV 351



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 97/255 (38%), Positives = 125/255 (49%), Gaps = 30/255 (11%)

Query: 50  DYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIA 108
           D  K P N+  L L  N L+  P+   K  NL  L+L NN+++ L Q I     L  L  
Sbjct: 32  DALKNPMNVRILDLSDNQLATLPNEIGKLENLEKLNLVNNQLSVLVQEIGTLQKLEWLSL 91

Query: 109 RNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP--- 165
           +NN L  ESLP  +  L+ L+  NL  NQL     +I  +  L++L L NN L  +P   
Sbjct: 92  KNNRL--ESLPNKIGKLRKLEHLNLENNQLAVLVQEIGTLQKLEWLSLKNNRLESLPNKI 149

Query: 166 --------------------REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDN 205
                               +EI  L KL  LSL  N L  +P+  G L +LE L L  N
Sbjct: 150 GKLRKLEHLNLEHNQLAVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLEHN 209

Query: 206 QLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
           QL  L   I  L+ L+ L L NN+L  LP EI  L    +KL+ L L NNKL +LP EI 
Sbjct: 210 QLAVLVQEIGTLQKLEWLSLENNQLTVLPQEIGKL----QKLEVLCLKNNKLGSLPQEIG 265

Query: 266 TLKCLSELSLRDNPL 280
           TL+ L  LSL +N L
Sbjct: 266 TLRRLRFLSLVNNRL 280



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/243 (34%), Positives = 119/243 (48%), Gaps = 32/243 (13%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM 122
           +YH+    F D      N+R LDLS+N++                         +LP ++
Sbjct: 26  VYHD----FSDALKNPMNVRILDLSDNQLA------------------------TLPNEI 57

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             L+NL+  NL  NQL     +I  +  L++L L NN L  +P +I KL KL  L+L  N
Sbjct: 58  GKLENLEKLNLVNNQLSVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLENN 117

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            L  +    G L +LE L L +N+LESLP  I  L+ L+ L L +N+L  L  EI TL  
Sbjct: 118 QLAVLVQEIGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTL-- 175

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRT 302
             +KL+ L L NN+L +LP +I  L+ L  L+L  N L +      T +    L L +  
Sbjct: 176 --QKLEWLSLKNNRLESLPNKIGKLRKLEHLNLEHNQLAVLVQEIGTLQKLEWLSLENNQ 233

Query: 303 LKV 305
           L V
Sbjct: 234 LTV 236


>gi|418693084|ref|ZP_13254147.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400356742|gb|EJP12900.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 738

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/237 (41%), Positives = 124/237 (52%), Gaps = 16/237 (6%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L  FP    +  NL++L+L +N++  LP  I     L  L  R N LT
Sbjct: 117 QNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGRLQNLEKLNLRKNRLT 176

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+  NL  NQL   P++I  +  L+ L L  N L   P+EI +L  L
Sbjct: 177 V--LPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENL 234

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALIL---------SDNQLESLPASISNLKMLKSLLL 225
             L L GN L  +P   G L +LE L L           NQL +LPA I  LK L+ L L
Sbjct: 235 QELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSL 294

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
             N+L TLP EI  L    + LKSL L  N+L TLP EI  LK L EL L  N L I
Sbjct: 295 SYNRLATLPREIGQL----QNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTI 347



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 101/268 (37%), Positives = 140/268 (52%), Gaps = 23/268 (8%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           ++++ LD S  +    TL  +IE         K +N+  L L+ N L+ FP    +   L
Sbjct: 48  LNVRVLDLSGQNFT--TLPKEIE---------KLKNLQKLYLFDNQLATFPAVIVELQKL 96

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
            SLDLS NR+  LP  I     L  L + +N L+T    PK++  L+NL+  NL  NQL 
Sbjct: 97  ESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLIT---FPKEIGQLQNLQTLNLQDNQLA 153

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
             P++I  +  L+ L L  N L  +P+EI +L  L  L+L  N L  +P   G L  L+ 
Sbjct: 154 TLPVEIGRLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQT 213

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLK------SLLLH 253
           L LS+NQL + P  I  L+ L+ L L+ N+L+TLP EI  L+ L EKL       + L  
Sbjct: 214 LGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKL-EKLNLDGNQITTLPK 272

Query: 254 NNKLRTLPTEIITLKCLSELSLRDNPLV 281
            N+L TLP EI  LK L  LSL  N L 
Sbjct: 273 GNQLTTLPAEIGQLKNLQILSLSYNRLA 300



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/255 (35%), Positives = 127/255 (49%), Gaps = 33/255 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-----------LS 104
           +N+ TL L  N L+ FP    +  NL+ LDL+ N++  LP+ I               ++
Sbjct: 209 QNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQIT 268

Query: 105 TLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHV 164
           TL   N L T   LP ++  LKNL++ +LS N+L   P +I  +  LK L LG N L  +
Sbjct: 269 TLPKGNQLTT---LPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTL 325

Query: 165 PREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLL 224
           PREINKL  L  L L GN LT +P    +L  L  L L +N++ +LP  I   K L+ L 
Sbjct: 326 PREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELN 385

Query: 225 LHNNKLRTLPTEI-------------ITLKCLSEKLKSLL------LHNNKLRTLPTEII 265
           L  N+L TLP EI               +K L  ++ +L       L  NKL ++P EI 
Sbjct: 386 LRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIG 445

Query: 266 TLKCLSELSLRDNPL 280
            L+ L  L L +N L
Sbjct: 446 NLQNLRMLYLENNQL 460



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/238 (36%), Positives = 122/238 (51%), Gaps = 31/238 (13%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N L+  P    +  NL++L+L +N++  LP  I     L TL    N LT
Sbjct: 163 QNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLT 222

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL-GN--------NSLNHVP 165
             + PK++  L+NL+  +L+GNQL+  P +I  +  L+ L L GN        N L  +P
Sbjct: 223 --TFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLP 280

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
            EI +L  L +LSL  N L  +P   G L  L++L L  NQL +LP  I+ LK LK L L
Sbjct: 281 AEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYL 340

Query: 226 HNNKLRTLPTEIITLKCL-------------------SEKLKSLLLHNNKLRTLPTEI 264
           + NKL  +P EI  L+ L                   S+ L+ L L  N+L TLP EI
Sbjct: 341 NGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRLVTLPGEI 398



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 83/217 (38%), Positives = 122/217 (56%), Gaps = 7/217 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L+  P    +  NL+ L LS NR+  LP+ I     L +L    N LT  +LP++++ 
Sbjct: 274 NQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLT--TLPREINK 331

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           LKNLK   L+GN+L   P +I ++  L  L L NN ++ +P+EI K   L  L+L GN L
Sbjct: 332 LKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNRL 391

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
             +P   G+L  LE L L +N+++ LP  I  L+ L    L  NKL ++P EI  L    
Sbjct: 392 VTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIGNL---- 447

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           + L+ L L NN+L+TLP ++  L+ L  L+L  NPL+
Sbjct: 448 QNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLL 484



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 120/229 (52%), Gaps = 29/229 (12%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNL 112
           ++P  I +L L +   S FP    +  NLRSL L +               ++L+A    
Sbjct: 519 EQPLKILSLSLEYQQFSLFPKEILRLKNLRSLSLYD---------------TSLVA---- 559

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG-NNSLNHVPREINKL 171
                LPK++  LK+L+  +L  NQL+  P +I  +  L+ L +G NN    +P+EI +L
Sbjct: 560 -----LPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARL 614

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L L  N     P    +L +L  L ++ NQL++LP  I  LK L+ L L +N+L 
Sbjct: 615 QNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLT 674

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           TLP+EI  L  L+E    L L  N+++TLP EI  L+ L +L+L +NP+
Sbjct: 675 TLPSEIGQLHNLTE----LYLQYNRIKTLPEEIARLQNLRKLTLYENPI 719



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 90/168 (53%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  N++V +LSG      P +I  +  L+ LYL +N L   P  I +L K
Sbjct: 36  TYMDLTKALQNPLNVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNQLATFPAVIVELQK 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L  +P+  G L  L+ L L  N+L + P  I  L+ L++L L +N+L TL
Sbjct: 96  LESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L+ L EKL    L  N+L  LP EI  L+ L  L+L+DN L 
Sbjct: 156 PVEIGRLQNL-EKLN---LRKNRLTVLPKEIGQLQNLQTLNLQDNQLA 199



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 39/101 (38%), Positives = 52/101 (51%), Gaps = 11/101 (10%)

Query: 188 PDTFGDLYQ-------LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           P T+ DL +       +  L LS     +LP  I  LK L+ L L +N+L T P  I+ L
Sbjct: 34  PGTYMDLTKALQNPLNVRVLDLSGQNFTTLPKEIEKLKNLQKLYLFDNQLATFPAVIVEL 93

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
               +KL+SL L  N+L  LP EI  L+ L EL L  N L+
Sbjct: 94  ----QKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLI 130


>gi|418702924|ref|ZP_13263816.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410767468|gb|EKR38143.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 358

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/229 (40%), Positives = 123/229 (53%), Gaps = 7/229 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L++N L        +  NL+ L L NN++T  P+ I     L  L   NN LT
Sbjct: 119 QNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTAFPKEIGKLQNLQELYLSNNQLT 178

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+NL+   LS NQL  FP +I  +  L++L LG+N L  +P EI KL KL
Sbjct: 179 --TFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKL 236

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N LT IP   G L  L+ L LS NQ +++P     LK LK L L  N+L  LP
Sbjct: 237 QELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALP 296

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
            EI  LK     LK L L  N+L T+P EI  L+ L  L LR+N   I 
Sbjct: 297 KEIGKLK----NLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQFSIE 341



 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 91/222 (40%), Positives = 121/222 (54%), Gaps = 7/222 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L +N L+  P    +  NL+ L+L NN++  + + I     L  L   NN LTA   P
Sbjct: 101 LYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTA--FP 158

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
           K++  L+NL+   LS NQL  FP +I  +  L+ LYL NN L   P+EI KL KL  L L
Sbjct: 159 KEIGKLQNLQELYLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGL 218

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
           G N LT IP+  G L +L+ L L  NQL ++P  I  L+ L+ L L  N+ +T+P E   
Sbjct: 219 GDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQ 278

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LK     LK L L  N+L  LP EI  LK L  L+L  N L+
Sbjct: 279 LK----NLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLI 316



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 121/228 (53%), Gaps = 7/228 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L+L    L   P+   +  NL+ LDLS+N++  LP+ I     L  L    N  
Sbjct: 26  PLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYN-- 83

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
             ++ PK++  LK+L    LS NQL   P++I  +  L+ L L NN L  + +EI +L  
Sbjct: 84  QFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKN 143

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT  P   G L  L+ L LS+NQL + P  I  L+ L+ L L NN+L T 
Sbjct: 144 LQKLYLDNNQLTAFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTF 203

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L    +KL+ L L +N+L T+P EI  L+ L EL+L  N L 
Sbjct: 204 PKEIGKL----QKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLT 247



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/164 (37%), Positives = 84/164 (51%), Gaps = 4/164 (2%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           L K   N  +++V  LS  +L+  P +I  +  L+ L L +N L  +P+EI +L  L  L
Sbjct: 19  LTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQEL 78

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            L  N     P     L  L  L LS+NQL  LP  I  L+ L+ L L NN+L+T+  EI
Sbjct: 79  FLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEI 138

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             LK     L+ L L NN+L   P EI  L+ L EL L +N L 
Sbjct: 139 EQLK----NLQKLYLDNNQLTAFPKEIGKLQNLQELYLSNNQLT 178



 Score = 58.5 bits (140), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 3/133 (2%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K + +  L L  N L+  P+   K   L+ L+L  N++T +P+ I     L  L    N 
Sbjct: 209 KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYN- 267

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
              +++P +   LKNLK+ +L  NQL   P +I  +  LK L L  N L  +P+EI +L 
Sbjct: 268 -QFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLITIPKEIGQLQ 326

Query: 173 KLHVLSLGGNSLT 185
            L  L L  N  +
Sbjct: 327 NLQTLYLRNNQFS 339



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 4/97 (4%)

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           D+   F +   +  LILS+ +L++LP  I  LK L+ L L +N+L  LP EI  LK L E
Sbjct: 18  DLTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQE 77

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
               L L+ N+ +T P EI  LK L +L L +N L I
Sbjct: 78  ----LFLNYNQFKTFPKEIEQLKSLHKLYLSNNQLTI 110



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 11/117 (9%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLP---QAITNFPLSTLIARNNLLTAESLPKDM 122
           N L+  P    +  NL+ L LS N+   +P     + N  + +L A  N LTA  LPK++
Sbjct: 244 NQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDA--NQLTA--LPKEI 299

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INKL---CKLH 175
             LKNLK+ NL  NQL   P +I  +  L+ LYL NN  +   +E I KL   C+++
Sbjct: 300 GKLKNLKMLNLDANQLITIPKEIGQLQNLQTLYLRNNQFSIEEKERIRKLLPKCQIY 356


>gi|359683928|ref|ZP_09253929.1| hypothetical protein Lsan2_04276 [Leptospira santarosai str.
           2000030832]
          Length = 594

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/229 (40%), Positives = 126/229 (55%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K + ++ L L +N+L+  P    K   L  L L NN++T  P+ I     L  L   +N 
Sbjct: 97  KLQKLEWLDLNYNSLATLPKEIGKLQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHNQ 156

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LPK++  L+ LKV NL GNQ    P +I  +  LK L+LG+N    +P+EI KL 
Sbjct: 157 LT--TLPKEIGKLQKLKVLNLDGNQFTTLPKEIEKLQKLKELHLGSNQFTTLPKEIKKLQ 214

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N L  +P   G L  L+ L L++NQL++LP  I  L+ L+ L L+NN+L T
Sbjct: 215 NLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLTT 274

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP EI  L    + L+ L LH N+L TLP EI  L+ L  LS   N L 
Sbjct: 275 LPKEIGKL----QNLQGLGLHYNQLTTLPKEIGKLQKLQVLSFYSNELT 319



 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/230 (40%), Positives = 129/230 (56%), Gaps = 7/230 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI-TNFPLSTLIARNNL 112
           K + +  L L  N L+  P    K   L+ L L +N++T LP+ I     L  L   NN 
Sbjct: 350 KLQKLQELHLSSNQLTTLPKEIGKLQKLQELHLGDNQLTTLPEEIGKLQKLKKLYLYNNR 409

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LPK++ NL+ L+  +L  N+L   PI+I ++  LK+LYL  N L  +P+EI  L 
Sbjct: 410 LT--TLPKEIGNLQKLRGLDLGNNKLTALPIEIGNLQKLKWLYLTFNQLKTLPKEIGNLQ 467

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  L L  N LT IP+  G+L +L  L LSDNQL +LP  I NL+ L+ L L  N+L T
Sbjct: 468 KLRGLDLSDNQLTTIPEEIGNLQKLRGLDLSDNQLTTLPKEIGNLQDLEVLYLSGNQLTT 527

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           LP EI  L+     L+SL L NN L + P EI  L+ L  L L + P ++
Sbjct: 528 LPKEIENLQS----LESLNLSNNPLTSFPEEIGKLQHLKWLRLENIPTLL 573



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/296 (35%), Positives = 147/296 (49%), Gaps = 38/296 (12%)

Query: 20  KTVSIKTLDFSYSSLDSETLATQIE--------LLPNNDYNKKPENIDTLL------LYH 65
           K   ++ LD +Y+SL   TL  +I          LPNN     P+ I+ L       L H
Sbjct: 97  KLQKLEWLDLNYNSL--ATLPKEIGKLQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAH 154

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSN 124
           N L+  P    K   L+ L+L  N+ T LP+ I     L  L   +N  T  +LPK++  
Sbjct: 155 NQLTTLPKEIGKLQKLKVLNLDGNQFTTLPKEIEKLQKLKELHLGSNQFT--TLPKEIKK 212

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+NL+  +L+ NQL+  P +I  +  L+ L+L NN L  +P+EI KL  L  L L  N L
Sbjct: 213 LQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQL 272

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T +P   G L  L+ L L  NQL +LP  I  L+ L+ L  ++N+L TLP EI  L+ L 
Sbjct: 273 TTLPKEIGKLQNLQGLGLHYNQLTTLPKEIGKLQKLQVLSFYSNELTTLPKEIKKLQNLQ 332

Query: 245 -------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                              +KL+ L L +N+L TLP EI  L+ L EL L DN L 
Sbjct: 333 WLDLHSNQLTTLSKEIGKLQKLQELHLSSNQLTTLPKEIGKLQKLQELHLGDNQLT 388



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 93/252 (36%), Positives = 131/252 (51%), Gaps = 30/252 (11%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K +N+  L L +N L+  P    K  NL+ L L  N++T LP+ I     L  L   +N 
Sbjct: 258 KLQNLQGLHLNNNQLTTLPKEIGKLQNLQGLGLHYNQLTTLPKEIGKLQKLQVLSFYSNE 317

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LPK++  L+NL+  +L  NQL     +I  +  L+ L+L +N L  +P+EI KL 
Sbjct: 318 LT--TLPKEIKKLQNLQWLDLHSNQLTTLSKEIGKLQKLQELHLSSNQLTTLPKEIGKLQ 375

Query: 173 KLHVLSLGGNSLTDIPDTFG-----------------------DLYQLEALILSDNQLES 209
           KL  L LG N LT +P+  G                       +L +L  L L +N+L +
Sbjct: 376 KLQELHLGDNQLTTLPEEIGKLQKLKKLYLYNNRLTTLPKEIGNLQKLRGLDLGNNKLTA 435

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           LP  I NL+ LK L L  N+L+TLP EI  L    +KL+ L L +N+L T+P EI  L+ 
Sbjct: 436 LPIEIGNLQKLKWLYLTFNQLKTLPKEIGNL----QKLRGLDLSDNQLTTIPEEIGNLQK 491

Query: 270 LSELSLRDNPLV 281
           L  L L DN L 
Sbjct: 492 LRGLDLSDNQLT 503



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 94/228 (41%), Positives = 126/228 (55%), Gaps = 7/228 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L +N L   P    K  NL+ L L+NN++T LP+ I     L  L    N 
Sbjct: 235 KLQNLQGLHLNNNQLKTLPKEIGKLQNLQGLHLNNNQLTTLPKEIGKLQNLQGLGLHYNQ 294

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LPK++  L+ L+V +   N+L   P +I  +  L++L L +N L  + +EI KL 
Sbjct: 295 LT--TLPKEIGKLQKLQVLSFYSNELTTLPKEIKKLQNLQWLDLHSNQLTTLSKEIGKLQ 352

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  L L  N LT +P   G L +L+ L L DNQL +LP  I  L+ LK L L+NN+L T
Sbjct: 353 KLQELHLSSNQLTTLPKEIGKLQKLQELHLGDNQLTTLPEEIGKLQKLKKLYLYNNRLTT 412

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           LP EI  L    +KL+ L L NNKL  LP EI  L+ L  L L  N L
Sbjct: 413 LPKEIGNL----QKLRGLDLGNNKLTALPIEIGNLQKLKWLYLTFNQL 456



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/164 (43%), Positives = 94/164 (57%), Gaps = 4/164 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++ NL+NL+  +L  NQL   P +I  +  L++L L  NSL  +P+EI KL KL  
Sbjct: 67  NLPKEIGNLQNLQKLSLYNNQLTTLPKEIGKLQKLEWLDLNYNSLATLPKEIGKLQKLDD 126

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N LT  P     L +L+ L L+ NQL +LP  I  L+ LK L L  N+  TLP E
Sbjct: 127 LRLPNNQLTTFPKEIEKLQKLQKLSLAHNQLTTLPKEIGKLQKLKVLNLDGNQFTTLPKE 186

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L    +KLK L L +N+  TLP EI  L+ L  L L +N L
Sbjct: 187 IEKL----QKLKELHLGSNQFTTLPKEIKKLQNLQGLHLNNNQL 226



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 62/145 (42%), Positives = 82/145 (56%), Gaps = 4/145 (2%)

Query: 134 SGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGD 193
           S ++L   P +I ++  L+ L L NN L  +P+EI KL KL  L L  NSL  +P   G 
Sbjct: 61  SNHKLTNLPKEIGNLQNLQKLSLYNNQLTTLPKEIGKLQKLEWLDLNYNSLATLPKEIGK 120

Query: 194 LYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLH 253
           L +L+ L L +NQL + P  I  L+ L+ L L +N+L TLP EI  L    +KLK L L 
Sbjct: 121 LQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHNQLTTLPKEIGKL----QKLKVLNLD 176

Query: 254 NNKLRTLPTEIITLKCLSELSLRDN 278
            N+  TLP EI  L+ L EL L  N
Sbjct: 177 GNQFTTLPKEIEKLQKLKELHLGSN 201


>gi|418744901|ref|ZP_13301246.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794232|gb|EKR92142.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 267

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/218 (41%), Positives = 124/218 (56%), Gaps = 7/218 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L +N L+  P+   K   L  L L NNR+T LP+ I     L +L   NN L   +LPK+
Sbjct: 10  LANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLI--TLPKE 67

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L+ L+   L+ NQL   P +I  +  L++L L NN L  +P+EI KL  L  L L  
Sbjct: 68  IGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRILPQEIGKLQNLKELILEN 127

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P   G L +L+ L L++NQL +LP  I  L+ LK L L +N+L TLP EI TL 
Sbjct: 128 NRLATLPKEIGTLRKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTL- 186

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
              ++L+ L L NN+LRTLP EI  L+ L +L L  NP
Sbjct: 187 ---QRLEWLSLKNNQLRTLPQEIGQLQNLKDLDLSGNP 221



 Score =  127 bits (320), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 97/242 (40%), Positives = 128/242 (52%), Gaps = 9/242 (3%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           Q+  LPN     K   ++ L L +N L+  P+      NL+SL+L NNR+  LP+ I   
Sbjct: 14  QLTTLPNEI--GKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLITLPKEIGTL 71

Query: 102 -PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
             L  L   NN L   +LPK++  L+ L+   L  NQL   P +I  +  LK L L NN 
Sbjct: 72  QKLEWLYLTNNQLA--TLPKEIGKLQRLEWLGLENNQLRILPQEIGKLQNLKELILENNR 129

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P+EI  L KL  L L  N L  +P   G L  L+ L LSDNQL +LP  I  L+ L
Sbjct: 130 LATLPKEIGTLRKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRL 189

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           + L L NN+LRTLP EI  L    + LK L L  N   T P EI+ LK L  L L++ P 
Sbjct: 190 EWLSLKNNQLRTLPQEIGQL----QNLKDLDLSGNPFTTFPQEIVGLKHLKTLVLQNIPA 245

Query: 281 VI 282
           ++
Sbjct: 246 LL 247



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 87/201 (43%), Positives = 119/201 (59%), Gaps = 7/201 (3%)

Query: 81  LRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
           L+ L L+NN++T LP  I     L  L   NN LT  +LP+++  L+NL+  NL  N+L 
Sbjct: 5   LKWLHLANNQLTTLPNEIGKLRKLEYLRLENNRLT--TLPEEIGTLQNLQSLNLENNRLI 62

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
             P +I  +  L++LYL NN L  +P+EI KL +L  L L  N L  +P   G L  L+ 
Sbjct: 63  TLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRILPQEIGKLQNLKE 122

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRT 259
           LIL +N+L +LP  I  L+ L+ L L NN+L TLP EI  L    + LK L L +N+L T
Sbjct: 123 LILENNRLATLPKEIGTLRKLQHLYLANNQLATLPKEIGQL----QNLKDLDLSDNQLVT 178

Query: 260 LPTEIITLKCLSELSLRDNPL 280
           LP EI TL+ L  LSL++N L
Sbjct: 179 LPEEIGTLQRLEWLSLKNNQL 199



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/133 (46%), Positives = 81/133 (60%), Gaps = 4/133 (3%)

Query: 149 PTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLE 208
           P LK+L+L NN L  +P EI KL KL  L L  N LT +P+  G L  L++L L +N+L 
Sbjct: 3   PALKWLHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLI 62

Query: 209 SLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLK 268
           +LP  I  L+ L+ L L NN+L TLP EI  L    ++L+ L L NN+LR LP EI  L+
Sbjct: 63  TLPKEIGTLQKLEWLYLTNNQLATLPKEIGKL----QRLEWLGLENNQLRILPQEIGKLQ 118

Query: 269 CLSELSLRDNPLV 281
            L EL L +N L 
Sbjct: 119 NLKELILENNRLA 131


>gi|421094569|ref|ZP_15555285.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410362631|gb|EKP13668.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
          Length = 379

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/240 (40%), Positives = 137/240 (57%), Gaps = 9/240 (3%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           Q   LPN+    K +N+  L L  N L+ FP++  +  NLR L LS N++T LP  I   
Sbjct: 99  QFTALPNDI--GKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIGKL 156

Query: 102 -PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
             L  L    N L  ++L K++  LK L+V +L+GNQL   P +I ++  L+ L+L  N 
Sbjct: 157 QKLERLSLIENQL--KTLSKEIGYLKELQVLDLNGNQLTTLPKEIGELKNLRELHLYKNQ 214

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P +I +L  L VL +G N L  +P   G+L  L+ L L  NQL++LP  I  L+ L
Sbjct: 215 LKTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQNLQELYLYTNQLKTLPKEIGELQNL 274

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             L LH N+L+TLP EI  L+ L+     L L NN+L+TLP EI  L+ L+ L LR+N L
Sbjct: 275 TVLDLHINELKTLPKEIGELQNLT----VLDLRNNELKTLPKEIGELQSLTVLDLRNNEL 330



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/227 (39%), Positives = 124/227 (54%), Gaps = 7/227 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN-NLL 113
           P ++  L L +  L+  P    +  NLR L+L  N++T LP  I       L+  + N  
Sbjct: 41  PTDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGKLQNLQLLNLDKNQF 100

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA  LP D+  LKNL+  +LS NQL  FP  I  +  L+ L+L  N L  +P +I KL K
Sbjct: 101 TA--LPNDIGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIGKLQK 158

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  LSL  N L  +    G L +L+ L L+ NQL +LP  I  LK L+ L L+ N+L+TL
Sbjct: 159 LERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLTTLPKEIGELKNLRELHLYKNQLKTL 218

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P +I  LK     L+ L + +N+L+TLP EI  L+ L EL L  N L
Sbjct: 219 PNDIGELK----NLQVLHIGSNQLKTLPKEIGELQNLQELYLYTNQL 261



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 111/205 (54%), Gaps = 5/205 (2%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           Q+  LPN+    K + ++ L L  N L            L+ LDL+ N++T LP+ I   
Sbjct: 145 QLTTLPNDI--GKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLTTLPKEIGEL 202

Query: 102 P-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
             L  L    N L  ++LP D+  LKNL+V ++  NQL+  P +I ++  L+ LYL  N 
Sbjct: 203 KNLRELHLYKNQL--KTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQNLQELYLYTNQ 260

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P+EI +L  L VL L  N L  +P   G+L  L  L L +N+L++LP  I  L+ L
Sbjct: 261 LKTLPKEIGELQNLTVLDLHINELKTLPKEIGELQNLTVLDLRNNELKTLPKEIGELQSL 320

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSE 245
             L L NN+L+TLP EI  LK L +
Sbjct: 321 TVLDLRNNELKTLPNEIGKLKELRK 345



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 91/229 (39%), Positives = 122/229 (53%), Gaps = 16/229 (6%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNN 111
           K + I T   YHN      +     T++R LDLSN R+T LP+ I     L  L + RN 
Sbjct: 24  KAQEIGT---YHN----LTEALQNPTDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQ 76

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
           L T   LP ++  L+NL++ NL  NQ    P  I  +  L+ L+L  N L   P +I +L
Sbjct: 77  LTT---LPNEIGKLQNLQLLNLDKNQFTALPNDIGKLKNLQELHLSFNQLTTFPNDIGQL 133

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L L  N LT +P+  G L +LE L L +NQL++L   I  LK L+ L L+ N+L 
Sbjct: 134 QNLRELHLSVNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLT 193

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           TLP EI  LK L E    L L+ N+L+TLP +I  LK L  L +  N L
Sbjct: 194 TLPKEIGELKNLRE----LHLYKNQLKTLPNDIGELKNLQVLHIGSNQL 238



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 5/163 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLTAESLPK 120
           L  N L+  P    +  NLR L L  N++  LP  I     L  L I  N L   ++LPK
Sbjct: 187 LNGNQLTTLPKEIGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQL---KTLPK 243

Query: 121 DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
           ++  L+NL+   L  NQL+  P +I ++  L  L L  N L  +P+EI +L  L VL L 
Sbjct: 244 EIGELQNLQELYLYTNQLKTLPKEIGELQNLTVLDLHINELKTLPKEIGELQNLTVLDLR 303

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL 223
            N L  +P   G+L  L  L L +N+L++LP  I  LK L+ L
Sbjct: 304 NNELKTLPKEIGELQSLTVLDLRNNELKTLPNEIGKLKELRKL 346



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 63/168 (37%), Positives = 91/168 (54%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +L + + N  ++++ +LS  +L   P +I ++  L+ L L  N L  +P EI KL  
Sbjct: 30  TYHNLTEALQNPTDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGKLQN 89

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L+L  N  T +P+  G L  L+ L LS NQL + P  I  L+ L+ L L  N+L TL
Sbjct: 90  LQLLNLDKNQFTALPNDIGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTL 149

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P +I  L    +KL+ L L  N+L+TL  EI  LK L  L L  N L 
Sbjct: 150 PNDIGKL----QKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLT 193


>gi|421119254|ref|ZP_15579578.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347884|gb|EKO98735.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 428

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/229 (42%), Positives = 131/229 (57%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+ TL L  N L+  P  + K  NL+ L+LS+N++T LPQ I     L TL  ++N 
Sbjct: 138 KLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQ 197

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +L K++  LKNL+  NLS NQL   PI+I  +  L  L L +N L  +  E+ KL 
Sbjct: 198 LT--TLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQ 255

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            LH L+L  N LT +P   G L  L  L LS NQL +LP  I  L+ L+ L LH+N+L T
Sbjct: 256 NLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTT 315

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L  EI  LK     L++L L  N+L  LP EI  L+ L EL+L +N L 
Sbjct: 316 LSKEIEQLK----NLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLT 360



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/230 (41%), Positives = 126/230 (54%), Gaps = 7/230 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K EN+  L LY N L+  P    K  NL++L LS+N++T LP+       L  L   +N 
Sbjct: 115 KLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQ 174

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP+++  L+NL+  NL  NQL     +I  +  L+ L L +N L  +P EI KL 
Sbjct: 175 LT--TLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQ 232

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            LH L+L  N L  +    G L  L  L LSDNQL +LP  I  L+ L +L L  N+L T
Sbjct: 233 NLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTT 292

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           LP EI  L    + L+ L LH+N+L TL  EI  LK L  LSL  N LVI
Sbjct: 293 LPIEIGKL----QNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVI 338



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/208 (42%), Positives = 117/208 (56%), Gaps = 7/208 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           N+R LDLS    T LP+ I     L  L   +N L  ++LPK++  LKNL+  NLS NQL
Sbjct: 49  NVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRL--KTLPKEIGQLKNLQELNLSSNQL 106

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
              P +I  +  L+ L L +N L  +P EI KL  L  L L  N LT +P   G L  L+
Sbjct: 107 TILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQ 166

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L LSDNQL +LP  I  L+ L++L L +N+L TL  EI  LK     L++L L +N+L 
Sbjct: 167 ELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLK----NLQTLNLSDNQLT 222

Query: 259 TLPTEIITLKCLSELSLRDNPLVIRFVS 286
           TLP EI  L+ L  L+L DN L I  + 
Sbjct: 223 TLPIEIGKLQNLHTLNLSDNQLAILLIE 250



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 92/261 (35%), Positives = 135/261 (51%), Gaps = 18/261 (6%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           ++++ LD S  +    TL  +IE L         +N+  L L+ N L   P    +  NL
Sbjct: 48  LNVRVLDLSGQNFT--TLPKEIEQL---------KNLQKLYLFDNRLKTLPKEIGQLKNL 96

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           + L+LS+N++T LP+ I     L  L   +N LT   LP ++  L+NL+   LS NQL  
Sbjct: 97  QELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI--LPIEIGKLQNLQTLYLSSNQLTT 154

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +   +  L+ L L +N L  +P+EI +L  L  L+L  N LT +      L  L+ L
Sbjct: 155 LPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTL 214

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            LSDNQL +LP  I  L+ L +L L +N+L  L  E+  L    + L +L L +N+L TL
Sbjct: 215 NLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKL----QNLHTLNLSDNQLTTL 270

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P EI  L+ L  L+L  N L 
Sbjct: 271 PIEIGKLQNLHTLNLSGNQLT 291



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 105/190 (55%), Gaps = 3/190 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  P    K  NL +L+LS+N++  L   +     L TL   +N LT
Sbjct: 209 KNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLT 268

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  L+NL   NLSGNQL   PI+I  +  L+ L L +N L  + +EI +L  L
Sbjct: 269 --TLPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNL 326

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             LSL  N L  +P   G L  L+ L L +NQL +LP  I  L+ L++L L+ N+L T P
Sbjct: 327 QTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFP 386

Query: 235 TEIITLKCLS 244
            EI  LK L 
Sbjct: 387 KEIGQLKNLQ 396



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 94/171 (54%), Gaps = 4/171 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  N++V +LSG      P +I  +  L+ LYL +N L  +P+EI +L  
Sbjct: 36  TYMDLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N LT +P   G L  L+ L L DN+L  LP  I  L+ L++L L +N+L TL
Sbjct: 96  LQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRF 284
           P E   L    E L+ L L +N+L TLP EI  L+ L  L+L+ N L   F
Sbjct: 156 PRESGKL----ENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLF 202



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 93/177 (52%), Gaps = 5/177 (2%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+ TL L  N L+       K  NL +L+LS+N++T LP  I     L TL    N 
Sbjct: 230 KLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQ 289

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP ++  L+NL+  NL  NQL     +I  +  L+ L L  N L  +P+EI +L 
Sbjct: 290 LT--TLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQ 347

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL--HN 227
            L  L+L  N LT +P   G L  L+ L L  N+L + P  I  LK L++L L  HN
Sbjct: 348 NLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHN 404



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 53/102 (51%), Gaps = 11/102 (10%)

Query: 188 PDTFGDLYQ-------LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           P T+ DL +       +  L LS     +LP  I  LK L+ L L +N+L+TLP EI  L
Sbjct: 34  PGTYMDLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQL 93

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           K L E    L L +N+L  LP EI  L+ L  L L DN L I
Sbjct: 94  KNLQE----LNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131


>gi|418680656|ref|ZP_13241900.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327600|gb|EJO79845.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|455665929|gb|EMF31411.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 309

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 105/259 (40%), Positives = 139/259 (53%), Gaps = 23/259 (8%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPN--------NDYNKKPENIDTL----LLY--HNN 67
           + ++ LD S   L  +TL  +I  L N        N     P+ I+ L    LLY   N 
Sbjct: 47  LEVRVLDLSRQKL--KTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNR 104

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           L+  P    +  NL+ LDL +N++T LPQ I     L  L  R+N LT  +L KD+  L+
Sbjct: 105 LTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLT--TLSKDIEQLQ 162

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NLK  +LS NQL   P +I  +  LK LYL  N     P+EI +L  L VL L  N LT 
Sbjct: 163 NLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQLTI 222

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P+    L +L+ L LSDNQL +LP  I  LK LKSL L NN+L+TLP EI  LK     
Sbjct: 223 LPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLRNNQLKTLPNEIEQLK----N 278

Query: 247 LKSLLLHNNKLRTLPTEII 265
           L++L L+NN+L +   E I
Sbjct: 279 LQTLYLNNNQLSSEEKEKI 297



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/227 (40%), Positives = 124/227 (54%), Gaps = 7/227 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P  +  L L    L   P    +  NL+ L L  N++T LPQ I     L  L  R+N L
Sbjct: 46  PLEVRVLDLSRQKLKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 105

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +LPK++  LKNL+V +L  NQL   P +I  +  L+ LYL +N L  + ++I +L  
Sbjct: 106 T--TLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQN 163

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P+    L  L++L LS+NQ  + P  I  L+ LK L L+NN+L  L
Sbjct: 164 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQLTIL 223

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P EI  LK    KL+ L L +N+L TLP EI  LK L  L LR+N L
Sbjct: 224 PNEIAKLK----KLQYLYLSDNQLITLPKEIEQLKNLKSLDLRNNQL 266



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/185 (40%), Positives = 97/185 (52%), Gaps = 19/185 (10%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++LP ++  LKNL+   L  NQL   P +I  +  L+ LYL +N L  +P+EI +L  L 
Sbjct: 60  KTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLPKEIEQLKNLQ 119

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           VL LG N LT +P     L  L+ L L  N+L +L   I  L+ LKSL L NN+L TLP 
Sbjct: 120 VLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPN 179

Query: 236 EIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           EI  LK L                    + LK L L+NN+L  LP EI  LK L  L L 
Sbjct: 180 EIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQLTILPNEIAKLKKLQYLYLS 239

Query: 277 DNPLV 281
           DN L+
Sbjct: 240 DNQLI 244



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 90/165 (54%), Gaps = 4/165 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N   ++V +LS  +L+  PI+I  +  L+ LYL  N L  +P+EI +L  
Sbjct: 35  TYRDLTKALQNPLEVRVLDLSRQKLKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKN 94

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P     L  L+ L L  NQL  LP  I  LK L+ L L +N+L TL
Sbjct: 95  LQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTL 154

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             +I  L    + LKSL L NN+L TLP EI  LK L  L L +N
Sbjct: 155 SKDIEQL----QNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 195



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 57/111 (51%), Gaps = 5/111 (4%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           CK+      G +  D+     +  ++  L LS  +L++LP  I  LK L+ L LH N+L 
Sbjct: 25  CKIQACEEPG-TYRDLTKALQNPLEVRVLDLSRQKLKTLPIEIGQLKNLQRLYLHYNQLT 83

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            LP EI  LK     L+ L L +N+L TLP EI  LK L  L L  N L +
Sbjct: 84  VLPQEIEQLK----NLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTV 130


>gi|418741977|ref|ZP_13298350.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|410750335|gb|EKR07315.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 379

 Score =  129 bits (325), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 92/227 (40%), Positives = 123/227 (54%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L+  P    K  NL+ L+L  NR+T LP  +     L  L    N LT
Sbjct: 94  QNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLT 153

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP+ +  L+NL++ N  GNQL  FP +I  +  L+ L LG N L  +  E+ +L  L
Sbjct: 154 I--LPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNL 211

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  N LT +P   G L +L+ L L  NQL +LP  I  LK L+ L L NN LRTLP
Sbjct: 212 QILDLISNPLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLP 271

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L    +KL++L L  N++ T P EI  L+ L EL+L  N L 
Sbjct: 272 KEIEQL----QKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLT 314



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/248 (34%), Positives = 131/248 (52%), Gaps = 22/248 (8%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L  N L+  PD   +  NL+ L+L  N++T LP+ I     L  L ++ N 
Sbjct: 115 KLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQ 174

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  + PK++  L+ L+  NL  N+L     +++ +  L+ L L +N L  +P+EI +L 
Sbjct: 175 LT--TFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTLPKEIGQLS 232

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  L L GN LT +P+  G L +L+ L L +N L +LP  I  L+ L++L L  N++ T
Sbjct: 233 KLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITT 292

Query: 233 LPTEIITLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            P EI  L+ L E                    L+ L L  N+L TLP E+  L+ L +L
Sbjct: 293 FPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKL 352

Query: 274 SLRDNPLV 281
           +L +NP+ 
Sbjct: 353 NLYNNPIA 360



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 86/227 (37%), Positives = 121/227 (53%), Gaps = 7/227 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P++   L L  + L+       K  NL+ L L+ N++T LP  I     L  L   +N L
Sbjct: 47  PKDARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNEL 106

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++  L+NL+V NL  N+L   P ++  +  L+ L L  N L  +P +I +L  
Sbjct: 107 TI--LPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQN 164

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L+  GN LT  P   G L +L+ L L  N+L +L   +  L+ L+ L L +N L TL
Sbjct: 165 LQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTTL 224

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P EI  L     KL+ L L+ N+L TLP EI  LK L EL L +NPL
Sbjct: 225 PKEIGQLS----KLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPL 267



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 4/108 (3%)

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L+L G+ L  +    G L  L+ L L+ NQL +LP  I  L+ L+ L L++N+L  LP
Sbjct: 51  RILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILP 110

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            EI  L    + L+ L L  N+L  LP E+  L+ L  L+L  N L I
Sbjct: 111 KEIGKL----QNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTI 154



 Score = 41.2 bits (95), Expect = 0.96,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 57/111 (51%), Gaps = 4/111 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           CKL   S    +  ++ +   +      L LS ++L +L   I  L+ L+ L L+ N+L 
Sbjct: 25  CKLQAQSKETQTYRNLTEALQNPKDARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLT 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           TLP EI  L    + L+ L L++N+L  LP EI  L+ L  L+L  N L I
Sbjct: 85  TLPNEIGQL----QNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTI 131


>gi|186686076|ref|YP_001869272.1| Miro domain-containing protein [Nostoc punctiforme PCC 73102]
 gi|186468528|gb|ACC84329.1| Miro domain protein [Nostoc punctiforme PCC 73102]
          Length = 1109

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 94/237 (39%), Positives = 135/237 (56%), Gaps = 12/237 (5%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAE 116
           + +L L  N LS  P    + T L+SLDL +N+++ LP  I     L +L   +N L+  
Sbjct: 202 LQSLDLRSNQLSSLPPEFGQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLS-- 259

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           SLP ++  L NL+  +LS NQL   P +I+ +  L+ LYL +N L+ +P EI +L KL  
Sbjct: 260 SLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQLTKLQSLYLSSNQLSSLPPEIVQLTKLQS 319

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L LG N L+ +P     L +L++L L  NQL SLP  I  L  L+SL L +N+L +LP E
Sbjct: 320 LDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSLPPE 379

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN-----PLVIRFVSDM 288
           I+ L     KL+SL L +N+L +LP EI+ L  L  L L  N     P  IR +S++
Sbjct: 380 IVQLT----KLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPREIRQLSNL 432



 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/226 (41%), Positives = 130/226 (57%), Gaps = 7/226 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           + +L L  N LS  P    + T L+SLDL +N+++ LP  I     L +L   +N L+  
Sbjct: 225 LQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLS-- 282

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           SLP ++  L  L+   LS NQL   P +I+ +  L+ L LG+N L+ +P EI +L KL  
Sbjct: 283 SLPPEIVQLTKLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTKLQS 342

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L LG N L+ +P     L  L++L LS NQL SLP  I  L  L+SL L +N+L +LP E
Sbjct: 343 LDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQLTKLQSLYLSSNQLSSLPPE 402

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           I+ L     KL+SL L +N+L +LP EI  L  L +L LR NP+ I
Sbjct: 403 IVQLT----KLQSLDLGSNQLSSLPREIRQLSNLKKLDLRRNPVPI 444



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/269 (37%), Positives = 141/269 (52%), Gaps = 22/269 (8%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ TL L +N LS  P    + TNL+SL L  N+++ LP  I     L +L   +N L+ 
Sbjct: 86  NLQTLHLGNNQLSSLPPEIGQLTNLQSLHLWINQLSSLPPEIGQLTNLQSLDLDSNQLS- 144

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLP +   L NL+  +L  NQL   P +I  +  L+ L L  N L+ +P EI +L KL 
Sbjct: 145 -SLPPEFGQLTNLQSLDLGSNQLSSLPPEIGQLTKLQSLDLSRNQLSSLPPEIVQLTKLQ 203

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L+ +P  FG L +L++L L  NQL SLP  I  L  L+SL L +N+L +LP 
Sbjct: 204 SLDLRSNQLSSLPPEFGQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPP 263

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
           EI+ L      L+SL L +N+L +LP EI+ L  L  L L  N L        +  PP +
Sbjct: 264 EIVQLT----NLQSLDLSSNQLSSLPPEIVQLTKLQSLYLSSNQL--------SSLPPEI 311

Query: 296 LELASRTLKVHEIDYSQEH---LPQNLVQ 321
           ++L     K+  +D        LP  +VQ
Sbjct: 312 VQLT----KLQSLDLGSNQLSSLPPEIVQ 336



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/270 (35%), Positives = 139/270 (51%), Gaps = 22/270 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           + +  L L +  L+  P    + TNL++L L +N+++ LP  I     L TL  R+N L+
Sbjct: 16  DEVTELDLSYKGLTILPPEIGQLTNLQTLHLDSNQLSSLPPKIGQLTNLQTLHLRSNQLS 75

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLP ++  L NL+  +L  NQL   P +I  +  L+ L+L  N L+ +P EI +L  L
Sbjct: 76  --SLPPEIGQLTNLQTLHLGNNQLSSLPPEIGQLTNLQSLHLWINQLSSLPPEIGQLTNL 133

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L+ +P  FG L  L++L L  NQL SLP  I  L  L+SL L  N+L +LP
Sbjct: 134 QSLDLDSNQLSSLPPEFGQLTNLQSLDLGSNQLSSLPPEIGQLTKLQSLDLSRNQLSSLP 193

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPS 294
            EI+ L     KL+SL L +N+L +LP E   L  L  L L  N L        +  PP 
Sbjct: 194 PEIVQLT----KLQSLDLRSNQLSSLPPEFGQLTKLQSLDLGSNQL--------SSLPPE 241

Query: 295 LLELASRTLKVHEIDYSQEH---LPQNLVQ 321
           +++L     K+  +D        LP  +VQ
Sbjct: 242 IVQLT----KLQSLDLGSNQLSSLPPEIVQ 267



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/213 (38%), Positives = 117/213 (54%), Gaps = 8/213 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAE 116
           + +L L  N LS  P    + TNL+SLDLS+N+++ LP  I     L +L   +N L+  
Sbjct: 248 LQSLDLGSNQLSSLPPEIVQLTNLQSLDLSSNQLSSLPPEIVQLTKLQSLYLSSNQLS-- 305

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           SLP ++  L  L+  +L  NQL   P +I+ +  L+ L LG+N L+ +P EI +L  L  
Sbjct: 306 SLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPPEIVQLTNLQS 365

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L+ +P     L +L++L LS NQL SLP  I  L  L+SL L +N+L +LP E
Sbjct: 366 LDLSSNQLSSLPPEIVQLTKLQSLYLSSNQLSSLPPEIVQLTKLQSLDLGSNQLSSLPRE 425

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           I  L      LK L L  N +  +P EI+  K 
Sbjct: 426 IRQLS----NLKKLDLRRNPV-PIPPEILGPKA 453


>gi|418744885|ref|ZP_13301230.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794216|gb|EKR92126.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 367

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 93/228 (40%), Positives = 133/228 (58%), Gaps = 7/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +++  L L  N  +  P+   K  NL+ L L+ N++T LP+ I N   L  L    N LT
Sbjct: 129 QHLKRLFLGLNQFTALPEEIGKLQNLQELYLNENQLTTLPKEIGNLQNLQELYLNENQLT 188

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  LPK++  L+NL+   L+ NQL   PI+I ++  L+ L L  N L  +P+EI KL  L
Sbjct: 189 A--LPKEIGKLQNLQKLVLNRNQLTTLPIEIGNLQNLQGLNLDKNQLTTLPKEIGKLQNL 246

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L LG N LT +P    +L +L+ L L+ NQL ++P  I NL+ LK L L +N+L T+P
Sbjct: 247 QGLHLGNNKLTALPIEIENLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIP 306

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            EI  L    +KL++L L+NN+L TLP EI  L+ L +L L  NP +I
Sbjct: 307 KEIENL----QKLETLDLYNNQLTTLPKEIGKLQNLQDLYLGGNPSLI 350



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/252 (38%), Positives = 133/252 (52%), Gaps = 13/252 (5%)

Query: 31  YSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNR 90
           +  LD+E   T  E L N      P  +  L L    L   P+   +  NL+ L+L  N+
Sbjct: 18  FYKLDAEDFHTLNEALQN------PTQVRVLHLNGKKLIALPEEIGQLQNLKELNLWENK 71

Query: 91  ITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIP 149
           +T LPQ I N   L  L    N +T   LPK++  L++L+  NLS NQL   P +I ++ 
Sbjct: 72  LTTLPQEIGNLQHLQKLDLGFNKITV--LPKEIGQLQSLQELNLSFNQLATLPKEIGNLQ 129

Query: 150 TLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            LK L+LG N    +P EI KL  L  L L  N LT +P   G+L  L+ L L++NQL +
Sbjct: 130 HLKRLFLGLNQFTALPEEIGKLQNLQELYLNENQLTTLPKEIGNLQNLQELYLNENQLTA 189

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           LP  I  L+ L+ L+L+ N+L TLP EI  L    + L+ L L  N+L TLP EI  L+ 
Sbjct: 190 LPKEIGKLQNLQKLVLNRNQLTTLPIEIGNL----QNLQGLNLDKNQLTTLPKEIGKLQN 245

Query: 270 LSELSLRDNPLV 281
           L  L L +N L 
Sbjct: 246 LQGLHLGNNKLT 257



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/227 (39%), Positives = 125/227 (55%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +++  L L  N ++  P    +  +L+ L+LS N++  LP+ I N   L  L    N  T
Sbjct: 83  QHLQKLDLGFNKITVLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFT 142

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  LP+++  L+NL+   L+ NQL   P +I ++  L+ LYL  N L  +P+EI KL  L
Sbjct: 143 A--LPEEIGKLQNLQELYLNENQLTTLPKEIGNLQNLQELYLNENQLTALPKEIGKLQNL 200

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G+L  L+ L L  NQL +LP  I  L+ L+ L L NNKL  LP
Sbjct: 201 QKLVLNRNQLTTLPIEIGNLQNLQGLNLDKNQLTTLPKEIGKLQNLQGLHLGNNKLTALP 260

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L    +KLK L L+ N+L T+P EI  L+ L EL+L  N L 
Sbjct: 261 IEIENL----QKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLT 303



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 80/193 (41%), Positives = 110/193 (56%), Gaps = 3/193 (1%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L  N L+  P       NL+ L L+ N++T LP+ I     L  L+   N 
Sbjct: 150 KLQNLQELYLNENQLTTLPKEIGNLQNLQELYLNENQLTALPKEIGKLQNLQKLVLNRNQ 209

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP ++ NL+NL+  NL  NQL   P +I  +  L+ L+LGNN L  +P EI  L 
Sbjct: 210 LT--TLPIEIGNLQNLQGLNLDKNQLTTLPKEIGKLQNLQGLHLGNNKLTALPIEIENLQ 267

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  L L  N LT IP   G+L  L+ L LS NQL ++P  I NL+ L++L L+NN+L T
Sbjct: 268 KLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTTIPKEIENLQKLETLDLYNNQLTT 327

Query: 233 LPTEIITLKCLSE 245
           LP EI  L+ L +
Sbjct: 328 LPKEIGKLQNLQD 340


>gi|455790003|gb|EMF41899.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 428

 Score =  129 bits (324), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/229 (42%), Positives = 131/229 (57%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+ TL L  N L+  P  + K  NL+ L+LS+N++T LPQ I     L TL  ++N 
Sbjct: 138 KLQNLQTLYLSSNQLTTLPRESGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQ 197

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +L K++  LKNL+  NLS NQL   PI+I  +  L  L L +N L  +  E+ KL 
Sbjct: 198 LT--TLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQ 255

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            LH L+L  N LT +P   G L  L  L LS NQL +LP  I  L+ L+ L LH+N+L T
Sbjct: 256 NLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTT 315

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L  EI  LK     L++L L  N+L  LP EI  L+ L EL+L +N L 
Sbjct: 316 LSKEIEQLK----NLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLT 360



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/230 (41%), Positives = 126/230 (54%), Gaps = 7/230 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K EN+  L LY N L+  P    K  NL++L LS+N++T LP+       L  L   +N 
Sbjct: 115 KLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLGNLQELNLSDNQ 174

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP+++  L+NL+  NL  NQL     +I  +  L+ L L +N L  +P EI KL 
Sbjct: 175 LT--TLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQ 232

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            LH L+L  N L  +    G L  L  L LSDNQL +LP  I  L+ L +L L  N+L T
Sbjct: 233 NLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTT 292

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           LP EI  L    + L+ L LH+N+L TL  EI  LK L  LSL  N LVI
Sbjct: 293 LPIEIGKL----QNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVI 338



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 89/208 (42%), Positives = 117/208 (56%), Gaps = 7/208 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           N+R LDLS    T LP+ I     L  L   +N L  ++LPK++  LKNL+  NLS NQL
Sbjct: 49  NVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRL--KTLPKEIGQLKNLQELNLSSNQL 106

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
              P +I  +  L+ L L +N L  +P EI KL  L  L L  N LT +P   G L  L+
Sbjct: 107 TILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLGNLQ 166

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L LSDNQL +LP  I  L+ L++L L +N+L TL  EI  LK     L++L L +N+L 
Sbjct: 167 ELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLK----NLQTLNLSDNQLT 222

Query: 259 TLPTEIITLKCLSELSLRDNPLVIRFVS 286
           TLP EI  L+ L  L+L DN L I  + 
Sbjct: 223 TLPIEIGKLQNLHTLNLSDNQLAILLIE 250



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 92/261 (35%), Positives = 135/261 (51%), Gaps = 18/261 (6%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           ++++ LD S  +    TL  +IE         K +N+  L L+ N L   P    +  NL
Sbjct: 48  LNVRVLDLSGQNFT--TLPKKIE---------KLKNLQKLYLFDNRLKTLPKEIGQLKNL 96

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           + L+LS+N++T LP+ I     L  L   +N LT   LP ++  L+NL+   LS NQL  
Sbjct: 97  QELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI--LPIEIGKLQNLQTLYLSSNQLTT 154

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +   +  L+ L L +N L  +P+EI +L  L  L+L  N LT +      L  L+ L
Sbjct: 155 LPRESGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTL 214

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            LSDNQL +LP  I  L+ L +L L +N+L  L  E+  L    + L +L L +N+L TL
Sbjct: 215 NLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKL----QNLHTLNLSDNQLTTL 270

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P EI  L+ L  L+L  N L 
Sbjct: 271 PIEIGKLQNLHTLNLSGNQLT 291



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 105/190 (55%), Gaps = 3/190 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  P    K  NL +L+LS+N++  L   +     L TL   +N LT
Sbjct: 209 KNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLT 268

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  L+NL   NLSGNQL   PI+I  +  L+ L L +N L  + +EI +L  L
Sbjct: 269 --TLPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNL 326

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             LSL  N L  +P   G L  L+ L L +NQL +LP  I  L+ L++L L+ N+L T P
Sbjct: 327 QTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFP 386

Query: 235 TEIITLKCLS 244
            EI  LK L 
Sbjct: 387 KEIGQLKNLQ 396



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 93/171 (54%), Gaps = 4/171 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  N++V +LSG      P +I  +  L+ LYL +N L  +P+EI +L  
Sbjct: 36  TYMDLTKALQNPLNVRVLDLSGQNFTTLPKKIEKLKNLQKLYLFDNRLKTLPKEIGQLKN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N LT +P   G L  L+ L L DN+L  LP  I  L+ L++L L +N+L TL
Sbjct: 96  LQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRF 284
           P E   L  L E    L L +N+L TLP EI  L+ L  L+L+ N L   F
Sbjct: 156 PRESGKLGNLQE----LNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLF 202



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 93/177 (52%), Gaps = 5/177 (2%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+ TL L  N L+       K  NL +L+LS+N++T LP  I     L TL    N 
Sbjct: 230 KLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQ 289

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP ++  L+NL+  NL  NQL     +I  +  L+ L L  N L  +P+EI +L 
Sbjct: 290 LT--TLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQ 347

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL--HN 227
            L  L+L  N LT +P   G L  L+ L L  N+L + P  I  LK L++L L  HN
Sbjct: 348 NLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHN 404


>gi|418698174|ref|ZP_13259153.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410762878|gb|EKR29037.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 430

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/229 (42%), Positives = 131/229 (57%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+ TL L  N L+  P  + K  NL+ L+LS+N++T LPQ I     L TL  ++N 
Sbjct: 140 KLQNLQTLYLSSNQLTTLPRESGKLGNLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQ 199

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +L K++  LKNL+  NLS NQL   PI+I  +  L  L L +N L  +  E+ KL 
Sbjct: 200 LT--TLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQ 257

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            LH L+L  N LT +P   G L  L  L LS NQL +LP  I  L+ L+ L LH+N+L T
Sbjct: 258 NLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTT 317

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L  EI  LK     L++L L  N+L  LP EI  L+ L EL+L +N L 
Sbjct: 318 LSKEIEQLK----NLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLT 362



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 96/230 (41%), Positives = 126/230 (54%), Gaps = 7/230 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K EN+  L LY N L+  P    K  NL++L LS+N++T LP+       L  L   +N 
Sbjct: 117 KLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLGNLQELNLSDNQ 176

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP+++  L+NL+  NL  NQL     +I  +  L+ L L +N L  +P EI KL 
Sbjct: 177 LT--TLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQ 234

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            LH L+L  N L  +    G L  L  L LSDNQL +LP  I  L+ L +L L  N+L T
Sbjct: 235 NLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTT 294

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           LP EI  L    + L+ L LH+N+L TL  EI  LK L  LSL  N LVI
Sbjct: 295 LPIEIGKL----QNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVI 340



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/208 (42%), Positives = 117/208 (56%), Gaps = 7/208 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           N+R L+LS    T LP+ I     L  L   +N L  ++LPK++  LKNL+  NLS NQL
Sbjct: 51  NVRILNLSGQNFTTLPKEIEQLKNLQKLYLFDNRL--KTLPKEIGQLKNLQELNLSSNQL 108

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
              P +I  +  L+ L L +N L  +P EI KL  L  L L  N LT +P   G L  L+
Sbjct: 109 TILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLGNLQ 168

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L LSDNQL +LP  I  L+ L++L L +N+L TL  EI  LK     L++L L +N+L 
Sbjct: 169 ELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLK----NLQTLNLSDNQLT 224

Query: 259 TLPTEIITLKCLSELSLRDNPLVIRFVS 286
           TLP EI  L+ L  L+L DN L I  + 
Sbjct: 225 TLPIEIGKLQNLHTLNLSDNQLAILLIE 252



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 105/190 (55%), Gaps = 3/190 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  P    K  NL +L+LS+N++  L   +     L TL   +N LT
Sbjct: 211 KNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLT 270

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  L+NL   NLSGNQL   PI+I  +  L+ L L +N L  + +EI +L  L
Sbjct: 271 --TLPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNL 328

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             LSL  N L  +P   G L  L+ L L +NQL +LP  I  L+ L++L L+ N+L T P
Sbjct: 329 QTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFP 388

Query: 235 TEIITLKCLS 244
            EI  LK L 
Sbjct: 389 KEIGQLKNLQ 398



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/227 (37%), Positives = 121/227 (53%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L+ N L   P    +  NL+ L+LS+N++T LP+ I     L  L   +N LT
Sbjct: 73  KNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLT 132

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP ++  L+NL+   LS NQL   P +   +  L+ L L +N L  +P+EI +L  L
Sbjct: 133 I--LPIEIGKLQNLQTLYLSSNQLTTLPRESGKLGNLQELNLSDNQLTTLPQEIGQLQNL 190

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N LT +      L  L+ L LSDNQL +LP  I  L+ L +L L +N+L  L 
Sbjct: 191 QTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILL 250

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            E+  L    + L +L L +N+L TLP EI  L+ L  L+L  N L 
Sbjct: 251 IEVGKL----QNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLT 293



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 93/171 (54%), Gaps = 4/171 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  N+++ NLSG      P +I  +  L+ LYL +N L  +P+EI +L  
Sbjct: 38  TYMDLTKALQNPLNVRILNLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKN 97

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N LT +P   G L  L+ L L DN+L  LP  I  L+ L++L L +N+L TL
Sbjct: 98  LQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTL 157

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRF 284
           P E   L  L E    L L +N+L TLP EI  L+ L  L+L+ N L   F
Sbjct: 158 PRESGKLGNLQE----LNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLF 204



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 93/177 (52%), Gaps = 5/177 (2%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+ TL L  N L+       K  NL +L+LS+N++T LP  I     L TL    N 
Sbjct: 232 KLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQ 291

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP ++  L+NL+  NL  NQL     +I  +  L+ L L  N L  +P+EI +L 
Sbjct: 292 LT--TLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQ 349

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL--HN 227
            L  L+L  N LT +P   G L  L+ L L  N+L + P  I  LK L++L L  HN
Sbjct: 350 NLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHN 406


>gi|421088183|ref|ZP_15549011.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410003168|gb|EKO53614.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 305

 Score =  129 bits (324), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 96/225 (42%), Positives = 125/225 (55%), Gaps = 7/225 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K P ++  L L    L+  P    +  NL++L+L NN+ T LP  I     L  L   +N
Sbjct: 41  KNPLDVRVLNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLRELYLGDN 100

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  +LPK++  LKNL+VF L+ NQL   P +I  +  L++L L NN L  +P+E+ +L
Sbjct: 101 QLT--TLPKEVGQLKNLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTTLPKEVGQL 158

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L+ LSL  N LT +P   G L  L  L LS N L  LP  I  LK L SL L  N+L 
Sbjct: 159 KNLYDLSLHDNKLTTLPKETGQLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNLTYNQLT 218

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           TLP EI  L+ L E    L L +N+L+TLP EI  LK L EL LR
Sbjct: 219 TLPKEIGQLQSLRE----LYLGDNQLKTLPKEIGQLKNLRELLLR 259



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/182 (41%), Positives = 97/182 (53%), Gaps = 19/182 (10%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LPK++  LKNL+  NL  NQ    P +I  + +L+ LYLG+N L  +P+E+ +L  L V 
Sbjct: 59  LPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQSLRELYLGDNQLTTLPKEVGQLKNLQVF 118

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            L  N LT +P   G L  L+ L L +NQL +LP  +  LK L  L LH+NKL TLP E 
Sbjct: 119 ELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTTLPKEVGQLKNLYDLSLHDNKLTTLPKET 178

Query: 238 ITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             LK L                    +KL SL L  N+L TLP EI  L+ L EL L DN
Sbjct: 179 GQLKNLRMLNLSKNLLTILPNEIGQLKKLLSLNLTYNQLTTLPKEIGQLQSLRELYLGDN 238

Query: 279 PL 280
            L
Sbjct: 239 QL 240



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/226 (38%), Positives = 116/226 (51%), Gaps = 15/226 (6%)

Query: 46  LPNNDYNKKPENIDTL------LLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN +   P  I  L       L  N L+  P    +  NL+  +L+NN++T LP  I 
Sbjct: 74  LWNNQFTTLPNEIGQLQSLRELYLGDNQLTTLPKEVGQLKNLQVFELNNNQLTTLPAEIG 133

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L  L   NN LT  +LPK++  LKNL   +L  N+L   P +   +  L+ L L  
Sbjct: 134 KLKNLQHLDLWNNQLT--TLPKEVGQLKNLYDLSLHDNKLTTLPKETGQLKNLRMLNLSK 191

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P EI +L KL  L+L  N LT +P   G L  L  L L DNQL++LP  I  LK
Sbjct: 192 NLLTILPNEIGQLKKLLSLNLTYNQLTTLPKEIGQLQSLRELYLGDNQLKTLPKEIGQLK 251

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
            L+ LLL + +L T+P EI  LK    KL+ LLL  N +  LP E+
Sbjct: 252 NLRELLLRHKQLTTVPKEIGQLK----KLRWLLLDANPI--LPKEL 291



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 72/169 (42%), Positives = 94/169 (55%), Gaps = 4/169 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T + L K + N  +++V NLS  +L   P +I  +  L+ L L NN    +P EI +L  
Sbjct: 32  TYKDLTKALKNPLDVRVLNLSKQKLTILPKEIGQLKNLQTLNLWNNQFTTLPNEIGQLQS 91

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L LG N LT +P   G L  L+   L++NQL +LPA I  LK L+ L L NN+L TL
Sbjct: 92  LRELYLGDNQLTTLPKEVGQLKNLQVFELNNNQLTTLPAEIGKLKNLQHLDLWNNQLTTL 151

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P E+  LK L +    L LH+NKL TLP E   LK L  L+L  N L I
Sbjct: 152 PKEVGQLKNLYD----LSLHDNKLTTLPKETGQLKNLRMLNLSKNLLTI 196


>gi|45656719|ref|YP_000805.1| hypothetical protein LIC10828 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421084288|ref|ZP_15545151.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102963|ref|ZP_15563565.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599955|gb|AAS69442.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367278|gb|EKP22664.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433188|gb|EKP77536.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 378

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/229 (40%), Positives = 124/229 (54%), Gaps = 7/229 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L++N L        +  NL+ L L NN++T L + I     L +L   NN LT
Sbjct: 139 QNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLT 198

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+NL+   LS NQL  FP +I  +  L++L LG+N L  +P EI KL KL
Sbjct: 199 --TFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKL 256

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N LT IP   G L  L+ L LS NQ +++P     LK LK L L  N+L  LP
Sbjct: 257 QELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALP 316

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
            EI  LK     LK L L  N+L T+P EI  L+ L  L LR+N   I 
Sbjct: 317 KEIGKLK----NLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQFSIE 361



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/221 (41%), Positives = 120/221 (54%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L +N L+  P    +  NL+ L+L NN++  + + I     L  L   NN LTA  L 
Sbjct: 121 LYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTA--LS 178

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
           K++  L+NLK   LS NQL  FP +I  +  L+ LYL NN L   P+EI KL KL  L L
Sbjct: 179 KEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGL 238

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
           G N LT IP+  G L +L+ L L  NQL ++P  I  L+ L+ L L  N+ +T+P E   
Sbjct: 239 GDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQ 298

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           LK     LK L L  N+L  LP EI  LK L  L+L  N L
Sbjct: 299 LK----NLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQL 335



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/226 (37%), Positives = 111/226 (49%), Gaps = 28/226 (12%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLT 114
           P ++  L+L    L   P+   +  NL+ LDLS+N++                       
Sbjct: 46  PLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLI---------------------- 83

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  LKNL+   L+ NQL  FP +I  + +L  LYL NN L  +P EI +L  L
Sbjct: 84  --ILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNL 141

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N L  I      L  L+ L L +NQL +L   I  L+ LKSL L NN+L T P
Sbjct: 142 QELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFP 201

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L+ L E    L L NN+L T P EI  L+ L  L L DN L
Sbjct: 202 KEIGKLQNLQE----LYLSNNQLTTFPKEIGKLQKLQWLGLGDNQL 243



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/182 (37%), Positives = 90/182 (49%), Gaps = 19/182 (10%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           L K   N  +++V  LS  +L+  P +I  +  L+ L L +N L  +P+EI +L  L  L
Sbjct: 39  LTKAFQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQEL 98

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            L  N LT  P     L  L  L LS+NQL  LP  I  L+ L+ L L NN+L+T+  EI
Sbjct: 99  FLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLKTISKEI 158

Query: 238 ITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             LK L                    + LKSL L NN+L T P EI  L+ L EL L +N
Sbjct: 159 EQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNN 218

Query: 279 PL 280
            L
Sbjct: 219 QL 220



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 3/133 (2%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K + +  L L  N L+  P+   K   L+ L+L  N++T +P+ I     L  L    N 
Sbjct: 229 KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYN- 287

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
              +++P +   LKNLK+ +L  NQL   P +I  +  LK L L  N L  +P+EI +L 
Sbjct: 288 -QFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQLQ 346

Query: 173 KLHVLSLGGNSLT 185
            L  L L  N  +
Sbjct: 347 NLQTLYLRNNQFS 359



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 54/97 (55%), Gaps = 4/97 (4%)

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           D+   F +   +  LILS+ +L+ LP  I  LK L+ L L +N+L  LP EI  LK L E
Sbjct: 38  DLTKAFQNPLDVRVLILSEQKLKVLPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQE 97

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
               L L+ N+L T P EI  LK L +L L +N L I
Sbjct: 98  ----LFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTI 130



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 11/117 (9%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLP---QAITNFPLSTLIARNNLLTAESLPKDM 122
           N L+  P    +  NL+ L LS N+   +P     + N  + +L A  N LTA  LPK++
Sbjct: 264 NQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDA--NQLTA--LPKEI 319

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INKL---CKLH 175
             LKNLK+ NL  NQL   P +I  +  L+ LYL NN  +   +E I KL   C+++
Sbjct: 320 GKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQFSIEEKERIRKLLPKCQIY 376


>gi|456825387|gb|EMF73783.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 428

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/229 (42%), Positives = 129/229 (56%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+ TL L  N L+  P  + K  NL+ L+LS+N++T LPQ I     L TL  ++N 
Sbjct: 138 KLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQ 197

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +L K++  LKNL+  NLS NQL   PI+I  +  L  L L  N L  +  EI KL 
Sbjct: 198 LT--TLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQ 255

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            LH L+L  N LT +P   G L  L  L LS NQL +L   I  L+ L+ L LH+N+L T
Sbjct: 256 NLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTT 315

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L  EI  LK     L++L L  N+L  LP EI  L+ L EL+L +N L 
Sbjct: 316 LSKEIEQLK----NLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLT 360



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/230 (42%), Positives = 127/230 (55%), Gaps = 7/230 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K EN+  L LY N L+  P    K  NL++L LS+N++T LP+       L  L   +N 
Sbjct: 115 KLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQ 174

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP+++  L+NL+  NL  NQL     +I  +  L+ L L +N L  +P EI KL 
Sbjct: 175 LT--TLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQ 232

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            LH L+L GN LT +    G L  L  L LSDNQL +LP  I  L+ L +L L  N+L T
Sbjct: 233 NLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTT 292

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           L  EI  L    + L+ L LH+N+L TL  EI  LK L  LSL  N LVI
Sbjct: 293 LSIEIGKL----QNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVI 338



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/230 (38%), Positives = 122/230 (53%), Gaps = 7/230 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           + P N+  L L   N +  P    +  NL+ L L +NR+  LP+ I     L  L   +N
Sbjct: 45  QNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSN 104

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT   LPK++  L+NL+  +L  N+L   PI+I  +  L+ LYL +N L  +PRE  KL
Sbjct: 105 QLTI--LPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKL 162

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L+L  N LT +P   G L  L+ L L  NQL +L   I  LK L++L L +N+L 
Sbjct: 163 ENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLT 222

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           TLP EI  L    + L +L L  N+L TL  EI  L+ L  L+L DN L 
Sbjct: 223 TLPIEIGKL----QNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLT 268



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/261 (36%), Positives = 135/261 (51%), Gaps = 18/261 (6%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           ++++ LD S  +    TL  +IE L         +N+  L L+ N L   P    +  NL
Sbjct: 48  LNVRVLDLSGQNFT--TLPKEIEQL---------KNLQKLYLFDNRLKTLPKEIGQLKNL 96

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           + L+LS+N++T LP+ I     L  L   +N LT   LP ++  L+NL+   LS NQL  
Sbjct: 97  QELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI--LPIEIGKLQNLQTLYLSSNQLTT 154

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +   +  L+ L L +N L  +P+EI +L  L  L+L  N LT +      L  L+ L
Sbjct: 155 LPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTL 214

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            LSDNQL +LP  I  L+ L +L L  N+L TL  EI  L    + L +L L +N+L TL
Sbjct: 215 NLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKL----QNLHTLNLSDNQLTTL 270

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P EI  L+ L  L+L  N L 
Sbjct: 271 PIEIGKLQNLHTLNLSGNQLT 291



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/190 (40%), Positives = 104/190 (54%), Gaps = 3/190 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  P    K  NL +L+LS N++T L   I     L TL   +N LT
Sbjct: 209 KNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLT 268

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  L+NL   NLSGNQL    I+I  +  L+ L L +N L  + +EI +L  L
Sbjct: 269 --TLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNL 326

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             LSL  N L  +P   G L  L+ L L +NQL +LP  I  L+ L++L L+ N+L T P
Sbjct: 327 QTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFP 386

Query: 235 TEIITLKCLS 244
            EI  LK L 
Sbjct: 387 KEIGQLKNLQ 396



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 94/171 (54%), Gaps = 4/171 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  N++V +LSG      P +I  +  L+ LYL +N L  +P+EI +L  
Sbjct: 36  TYMDLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N LT +P   G L  L+ L L DN+L  LP  I  L+ L++L L +N+L TL
Sbjct: 96  LQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRF 284
           P E   L    E L+ L L +N+L TLP EI  L+ L  L+L+ N L   F
Sbjct: 156 PRESGKL----ENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLF 202



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 92/177 (51%), Gaps = 5/177 (2%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+ TL L  N L+       K  NL +L+LS+N++T LP  I     L TL    N 
Sbjct: 230 KLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQ 289

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  S+  ++  L+NL+  NL  NQL     +I  +  L+ L L  N L  +P+EI +L 
Sbjct: 290 LTTLSI--EIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQ 347

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL--HN 227
            L  L+L  N LT +P   G L  L+ L L  N+L + P  I  LK L++L L  HN
Sbjct: 348 NLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHN 404



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 4/111 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+     +   +  L LS     +LP  I  LK L+ L L +N+L+
Sbjct: 25  CEIQADEVEAGTYMDLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLK 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           TLP EI  LK L E    L L +N+L  LP EI  L+ L  L L DN L I
Sbjct: 85  TLPKEIGQLKNLQE----LNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131


>gi|418721889|ref|ZP_13281061.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410741686|gb|EKQ90441.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 351

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/227 (40%), Positives = 127/227 (55%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L+  P    +  NL  LDLS N  T LP+ I     L +LI R+N L 
Sbjct: 113 QNLKILHLYANQLTVLPKEIWQLKNLEDLDLSGNSFTILPKEIGRLQNLGSLIMRHNQL- 171

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            ++LPK++  LKNL    L  +QL+  P +I  +  L++L L NN L  +P+EI +L  L
Sbjct: 172 -KTLPKEIGQLKNLGELILEHSQLKTLPKEIGQLKDLQHLSLRNNQLTILPKEIEQLKNL 230

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             LS   N LT +P   G L  L  L L +NQL++LP  +  LK L+ L L  N+L+TLP
Sbjct: 231 LTLSSDNNQLTVLPKEIGLLQNLVTLDLRNNQLKTLPKEVGQLKNLRELYLSANQLKTLP 290

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            E+  LK     L+ L L NN+L TLP E+  LK L  L L  NP++
Sbjct: 291 KEVGQLK----NLRDLSLDNNQLETLPKEVGQLKNLRWLFLDANPIL 333



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/231 (40%), Positives = 127/231 (54%), Gaps = 11/231 (4%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI---TNFPLSTLIARNN 111
           P ++  L L    L+  P    +  NLR L L NN++T LP+ I    N  +  L A  N
Sbjct: 20  PLDVRVLDLREQKLTILPKEIWQLKNLRELRLDNNQLTTLPKEIGLLQNLKILHLYA--N 77

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT   LPK++  LKNL+  +L+ NQL   P +I  +  LK L+L  N L  +P+EI +L
Sbjct: 78  QLTI--LPKEIGQLKNLEYLDLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEIWQL 135

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L L GNS T +P   G L  L +LI+  NQL++LP  I  LK L  L+L +++L+
Sbjct: 136 KNLEDLDLSGNSFTILPKEIGRLQNLGSLIMRHNQLKTLPKEIGQLKNLGELILEHSQLK 195

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           TLP EI  LK     L+ L L NN+L  LP EI  LK L  LS  +N L +
Sbjct: 196 TLPKEIGQLK----DLQHLSLRNNQLTILPKEIEQLKNLLTLSSDNNQLTV 242



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 67/179 (37%), Positives = 94/179 (52%), Gaps = 19/179 (10%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++L K + N  +++V +L   +L   P +I  +  L+ L L NN L  +P+EI  L  L 
Sbjct: 11  KALTKALQNPLDVRVLDLREQKLTILPKEIWQLKNLRELRLDNNQLTTLPKEIGLLQNLK 70

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L L  N LT +P   G L  LE L L++NQL +LP  I  L+ LK L L+ N+L  LP 
Sbjct: 71  ILHLYANQLTILPKEIGQLKNLEYLDLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPK 130

Query: 236 EIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
           EI  LK L                    + L SL++ +N+L+TLP EI  LK L EL L
Sbjct: 131 EIWQLKNLEDLDLSGNSFTILPKEIGRLQNLGSLIMRHNQLKTLPKEIGQLKNLGELIL 189


>gi|456987322|gb|EMG22649.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 305

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 93/229 (40%), Positives = 124/229 (54%), Gaps = 7/229 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L++N L        +  NL+ L L NN++T L + I     L +L   NN LT
Sbjct: 66  QNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFLSNNQLT 125

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+NL+   LS NQL  FP +I  +  L++L LG+N L  +P EI KL KL
Sbjct: 126 --TFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKL 183

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N LT IP   G L  L+ L LS NQ +++P     LK LK L L  N+L  LP
Sbjct: 184 QELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALP 243

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
            EI  LK     LK L L  N+L T+P EI  L+ L  L LR+N   I 
Sbjct: 244 KEIGKLK----NLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQFSIE 288



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/250 (38%), Positives = 124/250 (49%), Gaps = 30/250 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP------------- 102
           +N+  L L +N L+ FP    +  +L  L LSNN++T LP  I                 
Sbjct: 20  KNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLQELNLWNNQLK 79

Query: 103 -----------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
                      L  L   NN LTA  L K++  L+NLK   LS NQL  FP +I  +  L
Sbjct: 80  TISKEIEQLKNLQKLYLDNNQLTA--LSKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNL 137

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           + LYL NN L   P+EI KL KL  L LG N LT IP+  G L +L+ L L  NQL ++P
Sbjct: 138 QELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIP 197

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             I  L+ L+ L L  N+ +T+P E   LK     LK L L  N+L  LP EI  LK L 
Sbjct: 198 KEIGQLQNLQVLFLSYNQFKTIPVEFGQLK----NLKMLSLDANQLTALPKEIGKLKNLK 253

Query: 272 ELSLRDNPLV 281
            L+L  N L 
Sbjct: 254 MLNLDANQLT 263



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/199 (40%), Positives = 110/199 (55%), Gaps = 7/199 (3%)

Query: 84  LDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
           LDLS+N++  LP+ I     L  L    N LT  + PK++  LK+L    LS NQL   P
Sbjct: 2   LDLSDNQLIILPKEIRQLKNLQELFLNYNQLT--TFPKEIEQLKSLHKLYLSNNQLTILP 59

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
           ++I  +  L+ L L NN L  + +EI +L  L  L L  N LT +    G L  L++L L
Sbjct: 60  VEIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKLQNLKSLFL 119

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
           S+NQL + P  I  L+ L+ L L NN+L T P EI  L    +KL+ L L +N+L T+P 
Sbjct: 120 SNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKL----QKLQWLGLGDNQLTTIPN 175

Query: 263 EIITLKCLSELSLRDNPLV 281
           EI  L+ L EL+L  N L 
Sbjct: 176 EIGKLQKLQELNLDVNQLT 194



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 65/177 (36%), Positives = 96/177 (54%), Gaps = 3/177 (1%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K +N+ +L L +N L+ FP    K  NL+ L LSNN++T  P+ I     L  L   +N 
Sbjct: 110 KLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLSNNQLTTFPKEIGKLQKLQWLGLGDNQ 169

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  ++P ++  L+ L+  NL  NQL   P +I  +  L+ L+L  N    +P E  +L 
Sbjct: 170 LT--TIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLK 227

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
            L +LSL  N LT +P   G L  L+ L L  NQL ++P  I  L+ L++L L NN+
Sbjct: 228 NLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQ 284



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 64/152 (42%), Positives = 84/152 (55%), Gaps = 4/152 (2%)

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
           + +LS NQL   P +I  +  L+ L+L  N L   P+EI +L  LH L L  N LT +P 
Sbjct: 1   MLDLSDNQLIILPKEIRQLKNLQELFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPV 60

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
             G L  L+ L L +NQL+++   I  LK L+ L L NN+L  L  EI  L    + LKS
Sbjct: 61  EIGQLQNLQELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTALSKEIGKL----QNLKS 116

Query: 250 LLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L L NN+L T P EI  L+ L EL L +N L 
Sbjct: 117 LFLSNNQLTTFPKEIGKLQNLQELYLSNNQLT 148



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 43/133 (32%), Positives = 65/133 (48%), Gaps = 3/133 (2%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K + +  L L  N L+  P+   K   L+ L+L  N++T +P+ I     L  L    N 
Sbjct: 156 KLQKLQWLGLGDNQLTTIPNEIGKLQKLQELNLDVNQLTTIPKEIGQLQNLQVLFLSYN- 214

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
              +++P +   LKNLK+ +L  NQL   P +I  +  LK L L  N L  +P+EI +L 
Sbjct: 215 -QFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIPKEIGQLQ 273

Query: 173 KLHVLSLGGNSLT 185
            L  L L  N  +
Sbjct: 274 NLQTLYLRNNQFS 286



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 62/117 (52%), Gaps = 11/117 (9%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLP---QAITNFPLSTLIARNNLLTAESLPKDM 122
           N L+  P    +  NL+ L LS N+   +P     + N  + +L A  N LTA  LPK++
Sbjct: 191 NQLTTIPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDA--NQLTA--LPKEI 246

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INKL---CKLH 175
             LKNLK+ NL  NQL   P +I  +  L+ LYL NN  +   +E I KL   C+++
Sbjct: 247 GKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQFSIEEKERIRKLLPKCQIY 303


>gi|418730417|ref|ZP_13288911.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774626|gb|EKR54630.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 428

 Score =  129 bits (323), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 98/229 (42%), Positives = 129/229 (56%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+ TL L  N L+  P  + K  NL+ L+LS+N++T LPQ I     L TL  ++N 
Sbjct: 138 KLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQ 197

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +L K++  LKNL+  NLS NQL   PI+I  +  L  L L  N L  +  EI KL 
Sbjct: 198 LT--TLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQ 255

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            LH L+L  N LT +P   G L  L  L LS NQL +L   I  L+ L+ L LH+N+L T
Sbjct: 256 NLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTT 315

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L  EI  LK     L++L L  N+L  LP EI  L+ L EL+L +N L 
Sbjct: 316 LSKEIEQLK----NLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLT 360



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/230 (42%), Positives = 127/230 (55%), Gaps = 7/230 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K EN+  L LY N L+  P    K  NL++L LS+N++T LP+       L  L   +N 
Sbjct: 115 KLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKLENLQELNLSDNQ 174

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP+++  L+NL+  NL  NQL     +I  +  L+ L L +N L  +P EI KL 
Sbjct: 175 LT--TLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLTTLPIEIGKLQ 232

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            LH L+L GN LT +    G L  L  L LSDNQL +LP  I  L+ L +L L  N+L T
Sbjct: 233 NLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTT 292

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           L  EI  L    + L+ L LH+N+L TL  EI  LK L  LSL  N LVI
Sbjct: 293 LSIEIGKL----QNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVI 338



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/230 (38%), Positives = 122/230 (53%), Gaps = 7/230 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           + P N+  L L   N +  P    +  NL+ L L +NR+  LP+ I     L  L   +N
Sbjct: 45  QNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKNLQELNLSSN 104

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT   LPK++  L+NL+  +L  N+L   PI+I  +  L+ LYL +N L  +PRE  KL
Sbjct: 105 QLTI--LPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTLPRESGKL 162

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L+L  N LT +P   G L  L+ L L  NQL +L   I  LK L++L L +N+L 
Sbjct: 163 ENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTLNLSDNQLT 222

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           TLP EI  L    + L +L L  N+L TL  EI  L+ L  L+L DN L 
Sbjct: 223 TLPIEIGKL----QNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLT 268



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 94/261 (36%), Positives = 135/261 (51%), Gaps = 18/261 (6%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           ++++ LD S  +    TL  +IE L         +N+  L L+ N L   P    +  NL
Sbjct: 48  LNVRVLDLSGQNFT--TLPKEIEQL---------KNLQKLYLFDNRLKTLPKEIGQLKNL 96

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           + L+LS+N++T LP+ I     L  L   +N LT   LP ++  L+NL+   LS NQL  
Sbjct: 97  QELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI--LPIEIGKLQNLQTLYLSSNQLTT 154

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +   +  L+ L L +N L  +P+EI +L  L  L+L  N LT +      L  L+ L
Sbjct: 155 LPRESGKLENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLFKEIEQLKNLQTL 214

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            LSDNQL +LP  I  L+ L +L L  N+L TL  EI  L    + L +L L +N+L TL
Sbjct: 215 NLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKL----QNLHTLNLSDNQLTTL 270

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P EI  L+ L  L+L  N L 
Sbjct: 271 PIEIGKLQNLHTLNLSGNQLT 291



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/190 (40%), Positives = 104/190 (54%), Gaps = 3/190 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  P    K  NL +L+LS N++T L   I     L TL   +N LT
Sbjct: 209 KNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLT 268

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  L+NL   NLSGNQL    I+I  +  L+ L L +N L  + +EI +L  L
Sbjct: 269 --TLPIEIGKLQNLHTLNLSGNQLTTLSIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNL 326

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             LSL  N L  +P   G L  L+ L L +NQL +LP  I  L+ L++L L+ N+L T P
Sbjct: 327 QTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFP 386

Query: 235 TEIITLKCLS 244
            EI  LK L 
Sbjct: 387 KEIGQLKNLQ 396



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/171 (39%), Positives = 94/171 (54%), Gaps = 4/171 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  N++V +LSG      P +I  +  L+ LYL +N L  +P+EI +L  
Sbjct: 36  TYMDLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQLKN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N LT +P   G L  L+ L L DN+L  LP  I  L+ L++L L +N+L TL
Sbjct: 96  LQELNLSSNQLTILPKEIGKLENLQRLDLYDNRLTILPIEIGKLQNLQTLYLSSNQLTTL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRF 284
           P E   L    E L+ L L +N+L TLP EI  L+ L  L+L+ N L   F
Sbjct: 156 PRESGKL----ENLQELNLSDNQLTTLPQEIGQLQNLQTLNLKSNQLTTLF 202



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 66/177 (37%), Positives = 92/177 (51%), Gaps = 5/177 (2%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+ TL L  N L+       K  NL +L+LS+N++T LP  I     L TL    N 
Sbjct: 230 KLQNLHTLNLSGNQLTTLSIEIGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQ 289

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  S+  ++  L+NL+  NL  NQL     +I  +  L+ L L  N L  +P+EI +L 
Sbjct: 290 LTTLSI--EIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQ 347

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL--HN 227
            L  L+L  N LT +P   G L  L+ L L  N+L + P  I  LK L++L L  HN
Sbjct: 348 NLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHN 404



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 42/102 (41%), Positives = 53/102 (51%), Gaps = 11/102 (10%)

Query: 188 PDTFGDLYQ-------LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           P T+ DL +       +  L LS     +LP  I  LK L+ L L +N+L+TLP EI  L
Sbjct: 34  PGTYMDLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQKLYLFDNRLKTLPKEIGQL 93

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           K L E    L L +N+L  LP EI  L+ L  L L DN L I
Sbjct: 94  KNLQE----LNLSSNQLTILPKEIGKLENLQRLDLYDNRLTI 131


>gi|456971330|gb|EMG11963.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Grippotyphosa str. LT2186]
          Length = 349

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 94/231 (40%), Positives = 125/231 (54%), Gaps = 7/231 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           + P ++  L+L    L+  P    +  NL+ LDL +N++T LP+ I     L  LI   N
Sbjct: 43  QNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYN 102

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LTA  LPK++  LKNLKV  L+ NQL   P +I  +  L+ L LGNN L  +P+EI KL
Sbjct: 103 QLTA--LPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKL 160

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L +LSL  + LT +P   G L  L  L LS NQL  LP  I  L+ L+  +L NN+L 
Sbjct: 161 ENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLT 220

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            LP EI  L+ L E    L L +N+L  LP EI  L+ L    L +N   I
Sbjct: 221 ILPKEIGKLQNLHE----LYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTI 267



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 91/226 (40%), Positives = 124/226 (54%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L +N L+  P    +  NL+ LDL NN++T LP+ I     L  L    + LT
Sbjct: 115 KNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYESQLT 174

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP+++  L+NL   +LS NQL   P +I  +  L+   L NN L  +P+EI KL  L
Sbjct: 175 I--LPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNL 232

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
           H L LG N LT +P   G L  L+  +L +NQ   LP  I  L+ L+ L L  N+L T P
Sbjct: 233 HELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFP 292

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L    +KL++L L NN+L TLP EI  LK L  L+L +N L
Sbjct: 293 KEIGKL----QKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQL 334



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/220 (39%), Positives = 120/220 (54%), Gaps = 7/220 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           ++ +N+  L L +N L+  P    K  NL+ L L  +++T LPQ I     L  L   +N
Sbjct: 135 RQLKNLQMLDLGNNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHN 194

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT   LPK++  L+NL+ F L  NQL   P +I  +  L  LYLG+N L  +P+EI +L
Sbjct: 195 QLTI--LPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQL 252

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L    L  N  T +P   G L  L+ L LS NQL + P  I  L+ L++L L NN+L 
Sbjct: 253 QNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLT 312

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
           TLP EI  LK     LK+L L  N+L+T+P EI  L+ L 
Sbjct: 313 TLPEEIEQLK----NLKTLNLSENQLKTIPQEIGQLQNLK 348



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/191 (36%), Positives = 95/191 (49%), Gaps = 22/191 (11%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K EN+  L LY + L+  P    K  NL  LDLS+N++T LP+ I     L   +  NN 
Sbjct: 159 KLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQ 218

Query: 113 LTA---------------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
           LT                        LPK++  L+NL+ F L  NQ    P +I  +  L
Sbjct: 219 LTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNL 278

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           + LYL  N L   P+EI KL KL  L+L  N LT +P+    L  L+ L LS+NQL+++P
Sbjct: 279 QELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKTIP 338

Query: 212 ASISNLKMLKS 222
             I  L+ LKS
Sbjct: 339 QEIGQLQNLKS 349



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/186 (39%), Positives = 99/186 (53%), Gaps = 16/186 (8%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T + L K + N  +++V  LS  +L   P +I  +  LK L LG+N L  +P+EI +L  
Sbjct: 34  TYQDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P   G L  L+ L L++NQL +LP  I  LK L+ L L NN+L TL
Sbjct: 94  LQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTTL 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI----------- 282
           P EI  L    E L+ L L+ ++L  LP EI  L+ L EL L  N L I           
Sbjct: 154 PKEIGKL----ENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNL 209

Query: 283 -RFVSD 287
            RFV D
Sbjct: 210 QRFVLD 215



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 41/100 (41%), Positives = 55/100 (55%), Gaps = 11/100 (11%)

Query: 188 PDTFGDLYQ-------LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           P T+ DL +       +  LILS+ +L +LP  I  L+ LK L L +N+L  LP EI  L
Sbjct: 32  PGTYQDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQL 91

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           K     L+ L+L+ N+L  LP EI  LK L  L L +N L
Sbjct: 92  K----NLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQL 127


>gi|455791562|gb|EMF43369.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 380

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 96/226 (42%), Positives = 126/226 (55%), Gaps = 7/226 (3%)

Query: 81  LRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
           +R+LDLS NR   LP+ I     L  L    N LT   LPK++  LKNL+  NLS NQ++
Sbjct: 51  VRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTI--LPKEIGQLKNLRKLNLSANQIK 108

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
             P +I  +  L+ LYL  N L  +P+EI +L KL  L L  N LT +P   G L  L++
Sbjct: 109 TIPKEIEKLQKLQSLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKS 168

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRT 259
           L LS NQ++++P  I  L+ L+SL L NN+L TLP EI  LK     L++L L NN+L T
Sbjct: 169 LNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPKEIEQLK----NLQTLYLGNNRLTT 224

Query: 260 LPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKV 305
            P EI  LK L  L L DN L +        K   LL+L+   LK 
Sbjct: 225 FPKEIEQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLKT 270



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 99/245 (40%), Positives = 130/245 (53%), Gaps = 13/245 (5%)

Query: 46  LPNNDYNKKPENIDTL----LLY--HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           LP N     P+ I  L     LY   N L+  P    +  NL+SL+LS N+I  +P+ I 
Sbjct: 125 LPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIE 184

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L +L   NN LT  +LPK++  LKNL+   L  N+L  FP +I  +  L+ LYL +
Sbjct: 185 KLQKLQSLGLDNNQLT--TLPKEIEQLKNLQTLYLGNNRLTTFPKEIEQLKNLQLLYLYD 242

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P+EI +L  L +L L  N L  +P     L  L+ L L  NQL  LP  I  LK
Sbjct: 243 NQLTVLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQELNLGYNQLTVLPKEIEQLK 302

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L++L L  N+L  LP EI  L    + LK L L+NN+L TLP EI  LK L EL L +N
Sbjct: 303 NLQTLYLGYNQLTVLPKEIGQL----QNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNN 358

Query: 279 PLVIR 283
            L I 
Sbjct: 359 QLSIE 363



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 119/228 (52%), Gaps = 7/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N+  L L  N +   P    K   L+SL L  N++T LPQ I     L  L    N LT
Sbjct: 95  KNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLT 154

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+++  LKNLK  NLS NQ++  P +I  +  L+ L L NN L  +P+EI +L  L
Sbjct: 155 --TLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPKEIEQLKNL 212

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L LG N LT  P     L  L+ L L DNQL  LP  I  LK L+ L L  N+L+TLP
Sbjct: 213 QTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLKTLP 272

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            EI  LK L E    L L  N+L  LP EI  LK L  L L  N L +
Sbjct: 273 KEIEQLKNLQE----LNLGYNQLTVLPKEIEQLKNLQTLYLGYNQLTV 316



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 96/262 (36%), Positives = 136/262 (51%), Gaps = 18/262 (6%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           + ++TLD S +    +TL  +I          K +N+  L L  N L+  P    +  NL
Sbjct: 49  LKVRTLDLSANRF--KTLPKEI---------GKLKNLQELNLNKNQLTILPKEIGQLKNL 97

Query: 82  RSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           R L+LS N+I  +P+ I     L +L    N LT  +LP+++  L+ L+   L  NQL  
Sbjct: 98  RKLNLSANQIKTIPKEIEKLQKLQSLYLPKNQLT--TLPQEIGQLQKLQWLYLPKNQLTT 155

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +I  +  LK L L  N +  +P+EI KL KL  L L  N LT +P     L  L+ L
Sbjct: 156 LPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPKEIEQLKNLQTL 215

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L +N+L + P  I  LK L+ L L++N+L  LP EI  LK     L+ L L  N+L+TL
Sbjct: 216 YLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVLPQEIKQLK----NLQLLDLSYNQLKTL 271

Query: 261 PTEIITLKCLSELSLRDNPLVI 282
           P EI  LK L EL+L  N L +
Sbjct: 272 PKEIEQLKNLQELNLGYNQLTV 293



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 93/187 (49%), Gaps = 19/187 (10%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N   ++  +LS N+ +  P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 37  TYTDLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKN 96

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N +  IP     L +L++L L  NQL +LP  I  L+ L+ L L  N+L TL
Sbjct: 97  LRKLNLSANQIKTIPKEIEKLQKLQSLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTL 156

Query: 234 PTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           P EI  LK L                    +KL+SL L NN+L TLP EI  LK L  L 
Sbjct: 157 PQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPKEIEQLKNLQTLY 216

Query: 275 LRDNPLV 281
           L +N L 
Sbjct: 217 LGNNRLT 223



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 4/122 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K+ +N+  L L +N L   P    +  NL+ L+L  N++T LP+ I     L TL    N
Sbjct: 253 KQLKNLQLLDLSYNQLKTLPKEIEQLKNLQELNLGYNQLTVLPKEIEQLKNLQTLYLGYN 312

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INK 170
            LT   LPK++  L+NLKV  L+ NQL   P +I  +  L+ LYL NN L+   +E I K
Sbjct: 313 QLTV--LPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQLSIEEKERIQK 370

Query: 171 LC 172
           L 
Sbjct: 371 LI 372


>gi|421099978|ref|ZP_15560620.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796959|gb|EKR99076.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 580

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 103/258 (39%), Positives = 142/258 (55%), Gaps = 10/258 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           +  L L +N L   P    K  NL+ L L+NN++  LP+ I     L  L  R+N LT  
Sbjct: 107 LQKLYLDNNQLKTLPKEIGKLQNLQELYLTNNQLKTLPKEIGYLKELQDLDLRDNQLT-- 164

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LP ++  L+NL+  +LSGNQL+  P +I  +  L+ L L +N L  +P+EI  L +L  
Sbjct: 165 TLPNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLRELDLNDNQLKTLPKEIGYLKELQD 224

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N LT +P+  G L  L+ L LS NQL++LP  I  L+ L+ L L+ N+L+TLP E
Sbjct: 225 LDLRDNQLTTLPNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLQELYLYGNQLKTLPKE 284

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSE-LSLRDNPLVIRFVSDMTY-KPPS 294
           I  LK    +L+ L L +NKL TLP EI  L+ L   L L DN L      D+ Y K   
Sbjct: 285 IGYLK----ELQVLHLSDNKLTTLPKEIGQLQKLQALLHLGDNQLKT-LPKDIGYLKELQ 339

Query: 295 LLELASRTLKVHEIDYSQ 312
           LL+L+   LK    D  Q
Sbjct: 340 LLDLSGNQLKTLPKDIGQ 357



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/232 (40%), Positives = 129/232 (55%), Gaps = 12/232 (5%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L  N L   P +      L+ LDLS N++  LP+ I     L  L   +N L  ++LPKD
Sbjct: 320 LGDNQLKTLPKDIGYLKELQLLDLSGNQLKTLPKDIGQLQKLQDLELDSNQL--KTLPKD 377

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L+NL+V NLS NQL+  P  I  +  L+ L L NN L  +P+EI +L KL  L+L  
Sbjct: 378 IGKLQNLQVLNLSNNQLKTLPKDIGQLQKLRVLELYNNQLKTLPKEIGQLQKLQELNLSH 437

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N LT +P     L  L+ L L++NQL++LP  I  L+ L+ L L +NKL TLP +I  L+
Sbjct: 438 NKLTTLPKDIEKLQNLQVLNLTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQ 497

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN-----PLVIRFVSDM 288
            L E    L L NN+L TLP +I  L+ L EL L +N     P  IR++  +
Sbjct: 498 NLQE----LYLTNNQLTTLPKDIEKLQNLQELYLTNNQLTTLPKEIRYLKGL 545



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/227 (39%), Positives = 129/227 (56%), Gaps = 8/227 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L L +N L+  P +  K  NL+ L+L NN++T +P+ I     L  L    N L
Sbjct: 36  PTDVRYLDLNNNQLTTLPKDIGKLQNLQKLNLYNNQLTTIPKEIGYLKELQELNLSRNQL 95

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +LP  +  L+ L + N   NQL+  P +I  +  L+ LYL NN L  +P+EI  L +
Sbjct: 96  TTLTLPNKIGQLQKLYLDN---NQLKTLPKEIGKLQNLQELYLTNNQLKTLPKEIGYLKE 152

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P+  G L  L+ L LS NQL++LP  I  L+ L+ L L++N+L+TL
Sbjct: 153 LQDLDLRDNQLTTLPNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLRELDLNDNQLKTL 212

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P EI  LK    +L+ L L +N+L TLP EI  L+ L +L L  N L
Sbjct: 213 PKEIGYLK----ELQDLDLRDNQLTTLPNEIGKLQNLQKLDLSGNQL 255



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 87/218 (39%), Positives = 119/218 (54%), Gaps = 7/218 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L  N L   P +  +   L+ L+L +N++  LP+ I     L  L   NN L  ++LPKD
Sbjct: 343 LSGNQLKTLPKDIGQLQKLQDLELDSNQLKTLPKDIGKLQNLQVLNLSNNQL--KTLPKD 400

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L+ L+V  L  NQL+  P +I  +  L+ L L +N L  +P++I KL  L VL+L  
Sbjct: 401 IGQLQKLRVLELYNNQLKTLPKEIGQLQKLQELNLSHNKLTTLPKDIEKLQNLQVLNLTN 460

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P   G L  L+ L LS N+L +LP  I  L+ L+ L L NN+L TLP +I  L+
Sbjct: 461 NQLKTLPKEIGQLQNLQVLNLSHNKLTTLPKDIGKLQNLQELYLTNNQLTTLPKDIEKLQ 520

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
            L E    L L NN+L TLP EI  LK L  L L D P
Sbjct: 521 NLQE----LYLTNNQLTTLPKEIRYLKGLEVLHLDDIP 554



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/136 (47%), Positives = 81/136 (59%), Gaps = 10/136 (7%)

Query: 149 PT-LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQL 207
           PT ++YL L NN L  +P++I KL  L  L+L  N LT IP   G L +L+ L LS NQL
Sbjct: 36  PTDVRYLDLNNNQLTTLPKDIGKLQNLQKLNLYNNQLTTIPKEIGYLKELQELNLSRNQL 95

Query: 208 E--SLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
              +LP  I     L+ L L NN+L+TLP EI  L+ L E    L L NN+L+TLP EI 
Sbjct: 96  TTLTLPNKIG---QLQKLYLDNNQLKTLPKEIGKLQNLQE----LYLTNNQLKTLPKEIG 148

Query: 266 TLKCLSELSLRDNPLV 281
            LK L +L LRDN L 
Sbjct: 149 YLKELQDLDLRDNQLT 164



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 70/188 (37%), Positives = 99/188 (52%), Gaps = 24/188 (12%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +L + + N  +++  +L+ NQL   P  I  +  L+ L L NN L  +P+EI  L +
Sbjct: 25  THRNLTEALQNPTDVRYLDLNNNQLTTLPKDIGKLQNLQKLNLYNNQLTTIPKEIGYLKE 84

Query: 174 LHVLSLGGNSLT--DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           L  L+L  N LT   +P+  G   QL+ L L +NQL++LP  I  L+ L+ L L NN+L+
Sbjct: 85  LQELNLSRNQLTTLTLPNKIG---QLQKLYLDNNQLKTLPKEIGKLQNLQELYLTNNQLK 141

Query: 232 TLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSE 272
           TLP EI  LK L                    + L+ L L  N+L+TLP EI  L+ L E
Sbjct: 142 TLPKEIGYLKELQDLDLRDNQLTTLPNEIGKLQNLQKLDLSGNQLKTLPKEIGKLQNLRE 201

Query: 273 LSLRDNPL 280
           L L DN L
Sbjct: 202 LDLNDNQL 209


>gi|418744965|ref|ZP_13301310.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794296|gb|EKR92206.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 465

 Score =  128 bits (322), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 92/230 (40%), Positives = 124/230 (53%), Gaps = 7/230 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K P ++ +L L  + L           NLR L+L NN++  LP  I     L  L   NN
Sbjct: 35  KNPMDVKSLHLNRDQLRTLSQEVGTLQNLRELNLENNQLATLPNEIGQLENLQVLSLYNN 94

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            L   +LP+++  L+NL+  NL  NQL   P  I  +  L+ L L NN L  +P+EI KL
Sbjct: 95  RL--RTLPQEVGTLQNLRELNLENNQLATLPNGIGQLENLQVLNLHNNRLKSLPKEIGKL 152

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
            KL  L LGGN L  +P     L  LE L LS +QL++ P  I  L+ LK L+L +N+L 
Sbjct: 153 QKLKRLYLGGNQLRTLPQEIETLQDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLV 212

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L  EI  L+     L+ L+L NN+L TLP EI  L+ L EL+L +N LV
Sbjct: 213 VLSQEIGKLRS----LERLILENNQLATLPNEIGKLQNLEELNLSNNQLV 258



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 91/224 (40%), Positives = 120/224 (53%), Gaps = 7/224 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L +N L+  P+   +  NL+ L L NNR+  LPQ +     L  L   NN L 
Sbjct: 61  QNLRELNLENNQLATLPNEIGQLENLQVLSLYNNRLRTLPQEVGTLQNLRELNLENNQLA 120

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP  +  L+NL+V NL  N+L+  P +I  +  LK LYLG N L  +P+EI  L  L
Sbjct: 121 --TLPNGIGQLENLQVLNLHNNRLKSLPKEIGKLQKLKRLYLGGNQLRTLPQEIETLQDL 178

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  + L   P+  G L  L+ LIL  NQL  L   I  L+ L+ L+L NN+L TLP
Sbjct: 179 EELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLVVLSQEIGKLRSLERLILENNQLATLP 238

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  L+ L E    L L NN+L TLP EI  L+ L  L L  N
Sbjct: 239 NEIGKLQNLEE----LNLSNNQLVTLPQEIGALENLQNLHLYSN 278



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/244 (38%), Positives = 128/244 (52%), Gaps = 22/244 (9%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           ++++ L L  + L  FP+   K  +L+ L L +N++  L Q I     L  LI  NN L 
Sbjct: 176 QDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLVVLSQEIGKLRSLERLILENNQLA 235

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  L+NL+  NLS NQL   P +I  +  L+ L+L +N    +P++I +L  L
Sbjct: 236 --TLPNEIGKLQNLEELNLSNNQLVTLPQEIGALENLQNLHLYSNQFRTLPKQIWQLQNL 293

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L +LE L L DNQL +LP  I  L+ LK L L NN+LR LP
Sbjct: 294 QDLHLAHNQLTVLPQEIGKLEKLEDLYLEDNQLTTLPKEIWKLEKLKYLDLANNQLRLLP 353

Query: 235 TEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            EI  L+ L                    EKLK L L NN+L TLP EI  L+ L +L L
Sbjct: 354 EEIGKLEKLKYLDLSNNQLRLLPQKIGKLEKLKYLDLSNNQLATLPKEIGKLEKLEDLDL 413

Query: 276 RDNP 279
             NP
Sbjct: 414 SGNP 417



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 106/294 (36%), Positives = 148/294 (50%), Gaps = 39/294 (13%)

Query: 15  DSDSFKTVS--IKTL-DFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFF 71
           + D  +T+S  + TL +    +L++  LAT    LPN     + EN+  L LY+N L   
Sbjct: 46  NRDQLRTLSQEVGTLQNLRELNLENNQLAT----LPNEI--GQLENLQVLSLYNNRLRTL 99

Query: 72  PDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKV 130
           P       NLR L+L NN++  LP  I     L  L   NN L  +SLPK++  L+ LK 
Sbjct: 100 PQEVGTLQNLRELNLENNQLATLPNGIGQLENLQVLNLHNNRL--KSLPKEIGKLQKLKR 157

Query: 131 FNLSGNQL-----------------------EQFPIQILDIPTLKYLYLGNNSLNHVPRE 167
             L GNQL                       + FP +I  + +LK L L +N L  + +E
Sbjct: 158 LYLGGNQLRTLPQEIETLQDLEELHLSRDQLKTFPEEIGKLRSLKRLILDSNQLVVLSQE 217

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           I KL  L  L L  N L  +P+  G L  LE L LS+NQL +LP  I  L+ L++L L++
Sbjct: 218 IGKLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQLVTLPQEIGALENLQNLHLYS 277

Query: 228 NKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           N+ RTLP +I  L    + L+ L L +N+L  LP EI  L+ L +L L DN L 
Sbjct: 278 NQFRTLPKQIWQL----QNLQDLHLAHNQLTVLPQEIGKLEKLEDLYLEDNQLT 327



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/213 (40%), Positives = 119/213 (55%), Gaps = 7/213 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  +++ L+L +N L+  P+   K  NL  L+LSNN++  LPQ I     L  L   +N 
Sbjct: 220 KLRSLERLILENNQLATLPNEIGKLQNLEELNLSNNQLVTLPQEIGALENLQNLHLYSN- 278

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
               +LPK +  L+NL+  +L+ NQL   P +I  +  L+ LYL +N L  +P+EI KL 
Sbjct: 279 -QFRTLPKQIWQLQNLQDLHLAHNQLTVLPQEIGKLEKLEDLYLEDNQLTTLPKEIWKLE 337

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  L L  N L  +P+  G L +L+ L LS+NQL  LP  I  L+ LK L L NN+L T
Sbjct: 338 KLKYLDLANNQLRLLPEEIGKLEKLKYLDLSNNQLRLLPQKIGKLEKLKYLDLSNNQLAT 397

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
           LP EI  L    EKL+ L L  N   T P EI+
Sbjct: 398 LPKEIGKL----EKLEDLDLSGNPFTTFPKEIV 426



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/166 (40%), Positives = 95/166 (57%), Gaps = 4/166 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +L +++  L+NL+  NL  NQL   P +I  +  L+ L L NN L  +P+E+  L  L  
Sbjct: 52  TLSQEVGTLQNLRELNLENNQLATLPNEIGQLENLQVLSLYNNRLRTLPQEVGTLQNLRE 111

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+L  N L  +P+  G L  L+ L L +N+L+SLP  I  L+ LK L L  N+LRTLP E
Sbjct: 112 LNLENNQLATLPNGIGQLENLQVLNLHNNRLKSLPKEIGKLQKLKRLYLGGNQLRTLPQE 171

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           I TL+ L E    L L  ++L+T P EI  L+ L  L L  N LV+
Sbjct: 172 IETLQDLEE----LHLSRDQLKTFPEEIGKLRSLKRLILDSNQLVV 213


>gi|421110777|ref|ZP_15571268.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803874|gb|EKS10001.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 390

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 93/227 (40%), Positives = 130/227 (57%), Gaps = 7/227 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  +    N L+  P       NL+ L L+ N++T LP  I N   L  L+   N 
Sbjct: 150 KLQNLQEMESSKNQLTTLPKEIGNLQNLQELYLNENQLTALPIEIGNLQNLQKLVLNRNQ 209

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LTA  LP ++ NL+NL+   L+ NQL   PI+I ++  L+ L L  N L  +P+EI KL 
Sbjct: 210 LTA--LPIEIGNLQNLQKLVLNRNQLTALPIEIGNLQNLQGLNLDKNQLTTLPKEIRKLQ 267

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L LG N LT +P   G+L +L+ L L+ NQL ++P  I NL+ LK L L +N+L T
Sbjct: 268 NLQGLHLGNNKLTALPIEIGNLQKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLTT 327

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           +P EI  L    +KL++L L+NN+L TLP EI  L+ L  L L  NP
Sbjct: 328 IPKEIENL----QKLETLDLYNNQLTTLPKEIGNLQNLQRLYLGGNP 370



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 89/234 (38%), Positives = 128/234 (54%), Gaps = 7/234 (2%)

Query: 49  NDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLI 107
           N+  + P  +  L L    L+  P+   K  NL+ L+L  N++T LPQ I N   L  L 
Sbjct: 30  NEALQNPTQVRVLYLNGKKLTALPEEIGKLQNLQELNLWENKLTTLPQEIGNLQYLQKLD 89

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE 167
              N +T   LPK++  L++L+  NLS NQL   P +I ++  LK L+LG N    +P E
Sbjct: 90  LGFNKITV--LPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTALPEE 147

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           I KL  L  +    N LT +P   G+L  L+ L L++NQL +LP  I NL+ L+ L+L+ 
Sbjct: 148 IGKLQNLQEMESSKNQLTTLPKEIGNLQNLQELYLNENQLTALPIEIGNLQNLQKLVLNR 207

Query: 228 NKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           N+L  LP EI  L    + L+ L+L+ N+L  LP EI  L+ L  L+L  N L 
Sbjct: 208 NQLTALPIEIGNL----QNLQKLVLNRNQLTALPIEIGNLQNLQGLNLDKNQLT 257



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 87/227 (38%), Positives = 124/227 (54%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +++  L L  N  +  P+   K  NL+ ++ S N++T LP+ I N   L  L    N LT
Sbjct: 129 QHLKRLFLGLNQFTALPEEIGKLQNLQEMESSKNQLTTLPKEIGNLQNLQELYLNENQLT 188

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  LP ++ NL+NL+   L+ NQL   PI+I ++  L+ L L  N L  +P EI  L  L
Sbjct: 189 A--LPIEIGNLQNLQKLVLNRNQLTALPIEIGNLQNLQKLVLNRNQLTALPIEIGNLQNL 246

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N LT +P     L  L+ L L +N+L +LP  I NL+ LK L L+ N+L T+P
Sbjct: 247 QGLNLDKNQLTTLPKEIRKLQNLQGLHLGNNKLTALPIEIGNLQKLKWLGLNKNQLTTIP 306

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L    + LK L L +N+L T+P EI  L+ L  L L +N L 
Sbjct: 307 KEIGNL----QNLKELNLSSNQLTTIPKEIENLQKLETLDLYNNQLT 349



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/227 (39%), Positives = 122/227 (53%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +++  L L  N L+  P       +L+ L L  N+ T LP+ I     L  + +  N LT
Sbjct: 106 QSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTALPEEIGKLQNLQEMESSKNQLT 165

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++ NL+NL+   L+ NQL   PI+I ++  L+ L L  N L  +P EI  L  L
Sbjct: 166 --TLPKEIGNLQNLQELYLNENQLTALPIEIGNLQNLQKLVLNRNQLTALPIEIGNLQNL 223

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G+L  L+ L L  NQL +LP  I  L+ L+ L L NNKL  LP
Sbjct: 224 QKLVLNRNQLTALPIEIGNLQNLQGLNLDKNQLTTLPKEIRKLQNLQGLHLGNNKLTALP 283

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L    +KLK L L+ N+L T+P EI  L+ L EL+L  N L 
Sbjct: 284 IEIGNL----QKLKWLGLNKNQLTTIPKEIGNLQNLKELNLSSNQLT 326



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 86/220 (39%), Positives = 117/220 (53%), Gaps = 7/220 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L  N ++  P    +  +L+ L+LS N++  LP+ I N   L  L    N  TA  LP++
Sbjct: 90  LGFNKITVLPKEIGQLQSLQELNLSFNQLATLPKEIGNLQHLKRLFLGLNQFTA--LPEE 147

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L+NL+    S NQL   P +I ++  L+ LYL  N L  +P EI  L  L  L L  
Sbjct: 148 IGKLQNLQEMESSKNQLTTLPKEIGNLQNLQELYLNENQLTALPIEIGNLQNLQKLVLNR 207

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N LT +P   G+L  L+ L+L+ NQL +LP  I NL+ L+ L L  N+L TLP EI  L 
Sbjct: 208 NQLTALPIEIGNLQNLQKLVLNRNQLTALPIEIGNLQNLQGLNLDKNQLTTLPKEIRKL- 266

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
              + L+ L L NNKL  LP EI  L+ L  L L  N L 
Sbjct: 267 ---QNLQGLHLGNNKLTALPIEIGNLQKLKWLGLNKNQLT 303


>gi|421130081|ref|ZP_15590279.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410358680|gb|EKP05831.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 515

 Score =  128 bits (322), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 97/251 (38%), Positives = 128/251 (50%), Gaps = 30/251 (11%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L HN     P    +  NL++L L NN++T LP  I     L  L   +N LT
Sbjct: 138 KNLRVLELTHNQFKTIPKEIGQLKNLQTLYLGNNQLTALPNEIGQIQNLQFLYLGSNRLT 197

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  LKNL+  NL  NQ    P ++  +  LK LYLG+N L  +P EI +L  L
Sbjct: 198 I--LPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNRLTTLPNEIGQLKNL 255

Query: 175 HV-----------------------LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
            V                       L+LG N LT +P+  G L  L++L L +NQL +LP
Sbjct: 256 RVLELTHNQFKTISKEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQSLYLGNNQLTALP 315

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             I  L+ L+SL L NN+L  LP EI  L    +KL+ L L  N+L TLP EI  L+ L 
Sbjct: 316 NEIGQLQNLQSLYLGNNQLTALPNEIGQL----QKLQELYLSTNRLTTLPNEIGQLQNLQ 371

Query: 272 ELSLRDNPLVI 282
           EL L  N L I
Sbjct: 372 ELYLGSNQLTI 382



 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 95/246 (38%), Positives = 125/246 (50%), Gaps = 22/246 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N  +  P    K  NL+ L L +NR+T LP  I     L  L   +N   
Sbjct: 207 KNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHN--Q 264

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            +++ K++  LKNL+  NL  NQL   P +I  +  L+ LYLGNN L  +P EI +L  L
Sbjct: 265 FKTISKEIGQLKNLQTLNLGYNQLTALPNEIGQLQNLQSLYLGNNQLTALPNEIGQLQNL 324

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L LG N LT +P+  G L +L+ L LS N+L +LP  I  L+ L+ L L +N+L  LP
Sbjct: 325 QSLYLGNNQLTALPNEIGQLQKLQELYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILP 384

Query: 235 TEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            EI  LK L                    + LKSL L NN+L T P EI  LK L  L L
Sbjct: 385 NEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDL 444

Query: 276 RDNPLV 281
             N L 
Sbjct: 445 GSNQLT 450



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 90/229 (39%), Positives = 123/229 (53%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L  N L+  P    +  NLR L+L +N+ T LP+ +     L  L   +N 
Sbjct: 67  KLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNR 126

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP ++  LKNL+V  L+ NQ +  P +I  +  L+ LYLGNN L  +P EI ++ 
Sbjct: 127 LT--TLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLYLGNNQLTALPNEIGQIQ 184

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L LG N LT +P   G L  L  L L DNQ   LP  +  L+ LK L L +N+L T
Sbjct: 185 NLQFLYLGSNRLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNRLTT 244

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP EI  LK     L+ L L +N+ +T+  EI  LK L  L+L  N L 
Sbjct: 245 LPNEIGQLK----NLRVLELTHNQFKTISKEIGQLKNLQTLNLGYNQLT 289



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 93/226 (41%), Positives = 126/226 (55%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L +N L+  P+   +  NL+SL L NN++T LP  I     L +L   NN LT
Sbjct: 276 KNLQTLNLGYNQLTALPNEIGQLQNLQSLYLGNNQLTALPNEIGQLQNLQSLYLGNNQLT 335

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  LP ++  L+ L+   LS N+L   P +I  +  L+ LYLG+N L  +P EI +L  L
Sbjct: 336 A--LPNEIGQLQKLQELYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNL 393

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +      L  L++L L +NQL + P  I  LK L+ L L +N+L TLP
Sbjct: 394 QTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLP 453

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  LK     L+   L+NN+L TLP EI  L+ L EL L DN L
Sbjct: 454 KEIGQLK----NLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQL 495



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/238 (35%), Positives = 121/238 (50%), Gaps = 22/238 (9%)

Query: 17  DSFKTVS--------IKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNL 68
           + FKT+S        ++TL+  Y+ L +         LPN     + +N+ +L L +N L
Sbjct: 263 NQFKTISKEIGQLKNLQTLNLGYNQLTA---------LPNEI--GQLQNLQSLYLGNNQL 311

Query: 69  SFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKN 127
           +  P+   +  NL+SL L NN++T LP  I     L  L    N LT  +LP ++  L+N
Sbjct: 312 TALPNEIGQLQNLQSLYLGNNQLTALPNEIGQLQKLQELYLSTNRLT--TLPNEIGQLQN 369

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           L+   L  NQL   P +I  +  L+ LYL +N L  + ++I +L  L  L L  N LT  
Sbjct: 370 LQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTF 429

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           P     L  L+ L L  NQL +LP  I  LK L+   L+NN+L TLP EI  L+ L E
Sbjct: 430 PKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQLQNLQE 487



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 97/167 (58%), Gaps = 4/167 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++LPK++  LKNL+  NL+ NQL   P +I  +  L+ L L +N    +P+E+ KL  L 
Sbjct: 59  KTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLK 118

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L LG N LT +P+  G L  L  L L+ NQ +++P  I  LK L++L L NN+L  LP 
Sbjct: 119 ELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLYLGNNQLTALPN 178

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           EI  +    + L+ L L +N+L  LP EI  LK L +L+L DN   I
Sbjct: 179 EIGQI----QNLQFLYLGSNRLTILPKEIGQLKNLRKLNLYDNQFTI 221



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 90/169 (53%), Gaps = 4/169 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLS N+ +  P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 34  TYRDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N  T +P     L  L+ L L  N+L +LP  I  LK L+ L L +N+ +T+
Sbjct: 94  LRKLNLYDNQFTILPKEVEKLENLKELYLGSNRLTTLPNEIGQLKNLRVLELTHNQFKTI 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK     L++L L NN+L  LP EI  ++ L  L L  N L I
Sbjct: 154 PKEIGQLK----NLQTLYLGNNQLTALPNEIGQIQNLQFLYLGSNRLTI 198


>gi|421099974|ref|ZP_15560616.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796955|gb|EKR99072.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 398

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 95/228 (41%), Positives = 131/228 (57%), Gaps = 7/228 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLL 113
           P ++  L L  N L+  P +  +  NL+ LDL+NN++T LP+ I +   L  L   +N L
Sbjct: 39  PTDVRILDLKSNQLTTLPKDIGQLQNLQVLDLTNNQLTALPKEIEHLKELQVLHLSHNKL 98

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  SLPKD+ +LK L+  +L  NQL   P  I  +  L+ L+L  N L  +P+EI  L +
Sbjct: 99  T--SLPKDIEHLKELQELHLDYNQLTTLPKDIEHLKELQELHLDYNQLTTLPKEIGYLKE 156

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L VL L  N LT +P   G L +L+ L L DNQL +LP  I  LK L+ L L++N+L TL
Sbjct: 157 LQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTL 216

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L    + L+ L L NN+L+TLP EI  L+ L  L+L  N L 
Sbjct: 217 PKEIGKL----QNLQVLELTNNQLKTLPKEIGQLQNLQVLNLSHNKLT 260



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/218 (40%), Positives = 124/218 (56%), Gaps = 7/218 (3%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMS 123
           +N L+  P        L+ L L +N++T LP+ I     L  L   +N LT  +LPK++ 
Sbjct: 141 YNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLT--TLPKEIG 198

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            LK L+V +L  NQL   P +I  +  L+ L L NN L  +P+EI +L  L VL+L  N 
Sbjct: 199 YLKELQVLHLYDNQLTTLPKEIGKLQNLQVLELTNNQLKTLPKEIGQLQNLQVLNLSHNK 258

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT +P+  G L  L+ L L++NQL +LP  I  LK L+ L L NN+L+TLP EI  L   
Sbjct: 259 LTTLPNDIGKLQNLQELYLTNNQLTTLPKDIGYLKELQILELTNNQLKTLPKEIGQL--- 315

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            + L+ L L +NKL TLP +I  L+ L EL L +N L 
Sbjct: 316 -QNLQVLNLSHNKLTTLPKDIGKLQNLQELYLTNNQLT 352



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/223 (39%), Positives = 124/223 (55%), Gaps = 7/223 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAE 116
           +  L LY N L+  P        L+ L L +N++T LP+ I     L  L   +N LT  
Sbjct: 157 LQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLT-- 214

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++  L+NL+V  L+ NQL+  P +I  +  L+ L L +N L  +P +I KL  L  
Sbjct: 215 TLPKEIGKLQNLQVLELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPNDIGKLQNLQE 274

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N LT +P   G L +L+ L L++NQL++LP  I  L+ L+ L L +NKL TLP +
Sbjct: 275 LYLTNNQLTTLPKDIGYLKELQILELTNNQLKTLPKEIGQLQNLQVLNLSHNKLTTLPKD 334

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           I  L+ L E    L L NN+L TLP +I  LK L  L L D P
Sbjct: 335 IGKLQNLQE----LYLTNNQLTTLPKDIGYLKELQILHLDDIP 373



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 69/168 (41%), Positives = 94/168 (55%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +L + + N  ++++ +L  NQL   P  I  +  L+ L L NN L  +P+EI  L +
Sbjct: 28  TYYNLTEALQNPTDVRILDLKSNQLTTLPKDIGQLQNLQVLDLTNNQLTALPKEIEHLKE 87

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L VL L  N LT +P     L +L+ L L  NQL +LP  I +LK L+ L L  N+L TL
Sbjct: 88  LQVLHLSHNKLTSLPKDIEHLKELQELHLDYNQLTTLPKDIEHLKELQELHLDYNQLTTL 147

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  LK    +L+ L L++N+L TLP EI  LK L  L L DN L 
Sbjct: 148 PKEIGYLK----ELQVLHLYDNQLTTLPKEIGYLKELQVLHLYDNQLT 191


>gi|227874840|ref|ZP_03992993.1| possible leucine-rich repeat-containing protein [Mobiluncus
           mulieris ATCC 35243]
 gi|306818136|ref|ZP_07451867.1| leucine-rich repeat containing protein [Mobiluncus mulieris ATCC
           35239]
 gi|227844615|gb|EEJ54771.1| possible leucine-rich repeat-containing protein [Mobiluncus
           mulieris ATCC 35243]
 gi|304649100|gb|EFM46394.1| leucine-rich repeat containing protein [Mobiluncus mulieris ATCC
           35239]
          Length = 241

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/225 (38%), Positives = 121/225 (53%), Gaps = 28/225 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           +N+ TL L+ N L+ FP   S+  NL+ L L  N++T                       
Sbjct: 12  QNLQTLYLWKNQLTSFPKEISQLQNLQHLYLGENQLT----------------------- 48

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            S+PK++  L+NL+  NL  NQL  FP +IL +  L++L L +N L  +P+EI +L  L 
Sbjct: 49  -SIPKEIRQLQNLQTLNLWRNQLTSFPTEILQLQNLQHLVLRDNKLTSIPKEIGQLQNLT 107

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L GN LT IP     L  L+ L L  NQL S P  I  L+ L+ L L +NKL ++PT
Sbjct: 108 SLDLAGNKLTSIPKEIRQLQNLQTLNLWRNQLTSFPTEILQLQNLQHLSLGDNKLTSIPT 167

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI  LK     L+ L L +NKL ++P EI  L+ L  L+L+DN L
Sbjct: 168 EISQLK----NLQYLYLEDNKLTSIPKEISQLQNLQYLNLQDNKL 208



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 61/155 (39%), Positives = 91/155 (58%), Gaps = 3/155 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L+ N L+ FP    +  NL+ L L +N++T +P+ I     L++L    N LT
Sbjct: 58  QNLQTLNLWRNQLTSFPTEILQLQNLQHLVLRDNKLTSIPKEIGQLQNLTSLDLAGNKLT 117

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             S+PK++  L+NL+  NL  NQL  FP +IL +  L++L LG+N L  +P EI++L  L
Sbjct: 118 --SIPKEIRQLQNLQTLNLWRNQLTSFPTEILQLQNLQHLSLGDNKLTSIPTEISQLKNL 175

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
             L L  N LT IP     L  L+ L L DN+L++
Sbjct: 176 QYLYLEDNKLTSIPKEISQLQNLQYLNLQDNKLKA 210


>gi|418744841|ref|ZP_13301186.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794172|gb|EKR92082.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 485

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 91/228 (39%), Positives = 132/228 (57%), Gaps = 9/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLL 113
           +N+  L L  N L+  P+       L++LDLS+NR+T LP+ I N   L TL +A+N L 
Sbjct: 132 QNLQELNLEGNQLTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQKLQTLDLAQNQLK 191

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++  L+ L+  +L  N+L   P +I ++  L+ L L +N    +P EI  L K
Sbjct: 192 T---LPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQK 248

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  LSL  + LT +P   G+L  L+ L L+ NQ  +LP  I NL+ L++L L+ ++L TL
Sbjct: 249 LQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQTLDLNYSRLTTL 308

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L    +KL+ L L+ N+L+TLP EI  L+ L  LSL  N L 
Sbjct: 309 PKEIGKL----QKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELT 352



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/242 (37%), Positives = 137/242 (56%), Gaps = 18/242 (7%)

Query: 24  IKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRS 83
           ++TLD + + L  +TL  +IE         K + ++ L L +N L+  P       NL+ 
Sbjct: 180 LQTLDLAQNQL--KTLPKEIE---------KLQKLEALHLGNNELTTLPKEIGNLQNLQE 228

Query: 84  LDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
           L+L++N+ T LP+ I N   L  L   ++ LT  +LPK++ NL+NL+  NL+ NQ    P
Sbjct: 229 LNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLT--TLPKEIGNLQNLQELNLNSNQFTTLP 286

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
            +I ++  L+ L L  + L  +P+EI KL KL  L+L  N L  +P   G L  L+ L L
Sbjct: 287 EEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSL 346

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
           + N+L +LP  I NL+ L+ L L +N+L TLP +I  L    +KL+ L L  N+L+TLP 
Sbjct: 347 NGNELTTLPKEIGNLQNLQELSLGSNQLTTLPEKIGNL----QKLQELSLAGNRLKTLPK 402

Query: 263 EI 264
           EI
Sbjct: 403 EI 404



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/162 (43%), Positives = 99/162 (61%), Gaps = 4/162 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++ NL+NL+  NL GNQL   P +I ++  L+ L L +N L  +P+EI  L KL  
Sbjct: 123 TLPKEIGNLQNLQELNLEGNQLTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGNLQKLQT 182

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L  +P     L +LEAL L +N+L +LP  I NL+ L+ L L++N+  TLP E
Sbjct: 183 LDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEE 242

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           I  L    +KL+ L L +++L TLP EI  L+ L EL+L  N
Sbjct: 243 IGNL----QKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSN 280



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 95/243 (39%), Positives = 134/243 (55%), Gaps = 13/243 (5%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N +   PE I  L       L H+ L+  P       NL+ L+L++N+ T LP+ I 
Sbjct: 231 LNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIG 290

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
           N   L TL    + LT  +LPK++  L+ L+  NL  NQL+  P +I  +  LK L L  
Sbjct: 291 NLQKLQTLDLNYSRLT--TLPKEIGKLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNG 348

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P+EI  L  L  LSLG N LT +P+  G+L +L+ L L+ N+L++LP  I NL+
Sbjct: 349 NELTTLPKEIGNLQNLQELSLGSNQLTTLPEKIGNLQKLQELSLAGNRLKTLPKEIGNLQ 408

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+ L L+NN+L TLP EI  L+     L+SL L  N L + P EI  L+ L  L L  N
Sbjct: 409 NLQELNLNNNQLTTLPKEIENLQS----LESLNLSGNSLISFPEEIGKLQKLKWLYLGGN 464

Query: 279 PLV 281
           P +
Sbjct: 465 PFL 467



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/142 (42%), Positives = 84/142 (59%), Gaps = 4/142 (2%)

Query: 134 SGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGD 193
            GN+L   P +I ++  L+ L L  N L  +P EI  L KL  L L  N LT +P   G+
Sbjct: 117 GGNKLTTLPKEIGNLQNLQELNLEGNQLTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGN 176

Query: 194 LYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLH 253
           L +L+ L L+ NQL++LP  I  L+ L++L L NN+L TLP EI  L+ L E    L L+
Sbjct: 177 LQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQE----LNLN 232

Query: 254 NNKLRTLPTEIITLKCLSELSL 275
           +N+  TLP EI  L+ L +LSL
Sbjct: 233 SNQFTTLPEEIGNLQKLQKLSL 254



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 57/122 (46%), Positives = 78/122 (63%), Gaps = 4/122 (3%)

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
           G N L  +P+EI  L  L  L+L GN LT +P+  G+L +L+ L LS N+L +LP  I N
Sbjct: 117 GGNKLTTLPKEIGNLQNLQELNLEGNQLTTLPEEIGNLQKLQTLDLSHNRLTTLPKEIGN 176

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           L+ L++L L  N+L+TLP EI  L    +KL++L L NN+L TLP EI  L+ L EL+L 
Sbjct: 177 LQKLQTLDLAQNQLKTLPKEIEKL----QKLEALHLGNNELTTLPKEIGNLQNLQELNLN 232

Query: 277 DN 278
            N
Sbjct: 233 SN 234


>gi|417770639|ref|ZP_12418545.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|409947411|gb|EKN97409.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
          Length = 332

 Score =  128 bits (321), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 108/283 (38%), Positives = 144/283 (50%), Gaps = 41/283 (14%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           + ++ LD S   L  +TL  +I  L         +N+  L L++N L+  P    +  NL
Sbjct: 47  LEVRVLDLSRQKL--KTLPIEIGQL---------KNLQRLYLHYNQLTVLPQEIEQLKNL 95

Query: 82  RSLDLSNNRITHLPQAI----------------TNFP--------LSTLIARNNLLTAES 117
           + L L +NR+T LP+ I                T  P        L  L  R+N LT  +
Sbjct: 96  QLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLT--T 153

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           L KD+  L+NLK  +LS NQL   P +I  +  LK LYL  N     P+EI +L  L VL
Sbjct: 154 LSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVL 213

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            L  N LT +P+    L +L+ L LSDNQL +LP  I  LK LKSL L  N+L  LP E+
Sbjct: 214 FLNNNQLTILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTILPKEV 273

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             L    E L++L L NN+L+TLP EI  LK L  L L +N L
Sbjct: 274 GQL----ENLQTLDLRNNQLKTLPNEIEQLKNLQTLYLNNNQL 312



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/229 (40%), Positives = 123/229 (53%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P  +  L L    L   P    +  NL+ L L  N++T LPQ I     L  L  R+N L
Sbjct: 46  PLEVRVLDLSRQKLKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 105

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +LPK++  LKNL+V +L  NQL   P +I  +  L+ LYL +N L  + ++I +L  
Sbjct: 106 T--TLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQN 163

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P+    L  L++L LS+NQ  + P  I  L+ LK L L+NN+L  L
Sbjct: 164 LKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQLTIL 223

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK    KL+ L L +N+L TLP EI  LK L  L L  N L I
Sbjct: 224 PNEIAKLK----KLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTI 268



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 90/165 (54%), Gaps = 4/165 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N   ++V +LS  +L+  PI+I  +  L+ LYL  N L  +P+EI +L  
Sbjct: 35  TYRDLTKALQNPLEVRVLDLSRQKLKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKN 94

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P     L  L+ L L  NQL  LP  I  LK L+ L L +N+L TL
Sbjct: 95  LQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTVLPQEIEQLKNLQLLYLRSNRLTTL 154

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             +I  L    + LKSL L NN+L TLP EI  LK L  L L +N
Sbjct: 155 SKDIEQL----QNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSEN 195



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 42/111 (37%), Positives = 57/111 (51%), Gaps = 5/111 (4%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           CK+      G +  D+     +  ++  L LS  +L++LP  I  LK L+ L LH N+L 
Sbjct: 25  CKIQACEEPG-TYRDLTKALQNPLEVRVLDLSRQKLKTLPIEIGQLKNLQRLYLHYNQLT 83

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            LP EI  LK     L+ L L +N+L TLP EI  LK L  L L  N L +
Sbjct: 84  VLPQEIEQLK----NLQLLYLRSNRLTTLPKEIEQLKNLQVLDLGSNQLTV 130


>gi|255081536|ref|XP_002507990.1| predicted protein [Micromonas sp. RCC299]
 gi|226523266|gb|ACO69248.1| predicted protein [Micromonas sp. RCC299]
          Length = 323

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 95/242 (39%), Positives = 124/242 (51%), Gaps = 24/242 (9%)

Query: 60  TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTAES 117
           TL L+ N L+  P    + T+L  LDL  N++T +P  I     L+ L ++RN LL   S
Sbjct: 55  TLDLHANQLTSVPAEIGQLTSLVRLDLQVNQLTSVPAEIGQLTSLAGLFLSRNQLL---S 111

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           +P ++  L +L    LS NQL   P +I  + +L +LY+ NN L  VP EI +L  L  L
Sbjct: 112 VPAEIGQLTSLAHLYLSRNQLTSVPAEIGQLTSLAHLYISNNQLTSVPAEIGQLTSLTEL 171

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            L GN LT +P   G L  LE L L+ NQL SLPA I  L  L  L LH N+L ++P EI
Sbjct: 172 YLNGNKLTSVPAEIGQLTSLEKLDLAGNQLTSLPAEIGQLMSLTELNLHANQLTSVPAEI 231

Query: 238 ITLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             L  L+E                    L+SL L NN+LR +  EI  L  L  L L DN
Sbjct: 232 GQLTSLTELYLNANQLTSVPAEIGQLTSLESLFLGNNQLRNVLAEIGQLTSLKWLYLEDN 291

Query: 279 PL 280
            L
Sbjct: 292 KL 293



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 80/207 (38%), Positives = 110/207 (53%), Gaps = 11/207 (5%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L  N L+  P    + T+L  L +SNN++T +P  I     L+ L    N LT  S+P
Sbjct: 125 LYLSRNQLTSVPAEIGQLTSLAHLYISNNQLTSVPAEIGQLTSLTELYLNGNKLT--SVP 182

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            ++  L +L+  +L+GNQL   P +I  + +L  L L  N L  VP EI +L  L  L L
Sbjct: 183 AEIGQLTSLEKLDLAGNQLTSLPAEIGQLMSLTELNLHANQLTSVPAEIGQLTSLTELYL 242

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N LT +P   G L  LE+L L +NQL ++ A I  L  LK L L +NKL +LP EI  
Sbjct: 243 NANQLTSVPAEIGQLTSLESLFLGNNQLRNVLAEIGQLTSLKWLYLEDNKLTSLPAEIGQ 302

Query: 240 LKCLSEKLKSLLLH--NNKLRTLPTEI 264
           L  L      ++LH   N+L +LP EI
Sbjct: 303 LTSL------MMLHLNGNQLTSLPAEI 323



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 65/164 (39%), Positives = 86/164 (52%), Gaps = 4/164 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++P ++  L  L+V  L+ NQL   P +I  + +L  L L  N L  VP EI +L  L  
Sbjct: 19  AVPAEVGRLSALRVLYLNDNQLRNVPAEIGQLTSLVTLDLHANQLTSVPAEIGQLTSLVR 78

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N LT +P   G L  L  L LS NQL S+PA I  L  L  L L  N+L ++P E
Sbjct: 79  LDLQVNQLTSVPAEIGQLTSLAGLFLSRNQLLSVPAEIGQLTSLAHLYLSRNQLTSVPAE 138

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L  L+     L + NN+L ++P EI  L  L+EL L  N L
Sbjct: 139 IGQLTSLAH----LYISNNQLTSVPAEIGQLTSLTELYLNGNKL 178



 Score = 55.1 bits (131), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 5/111 (4%)

Query: 172 CKLHVLSLGGNSLTD-IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
            +++ L L G  LT  +P   G L  L  L L+DNQL ++PA I  L  L +L LH N+L
Sbjct: 4   GRVNELELDGLGLTGAVPAEVGRLSALRVLYLNDNQLRNVPAEIGQLTSLVTLDLHANQL 63

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            ++P EI  L  L      L L  N+L ++P EI  L  L+ L L  N L+
Sbjct: 64  TSVPAEIGQLTSLVR----LDLQVNQLTSVPAEIGQLTSLAGLFLSRNQLL 110


>gi|421118974|ref|ZP_15579301.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348314|gb|EKO99140.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 379

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 94/216 (43%), Positives = 124/216 (57%), Gaps = 10/216 (4%)

Query: 71  FPDNASKFTN---LRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           + D A    N   +R+LDLS NR   LP+ I     L  L    N LT   LPK++  LK
Sbjct: 37  YTDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTI--LPKEIGQLK 94

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL+  NLS NQ++  P +I  +  L+ LYL NN L  +P+EI +L KL  L L  N LT 
Sbjct: 95  NLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTT 154

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P   G L  L++L LS NQ++++P  I  L+ L+SL L NN+L TLP EI  L    + 
Sbjct: 155 LPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQL----QN 210

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           L+SL L NN+L TLP EI  L+ L +L L  N L I
Sbjct: 211 LQSLYLPNNQLTTLPQEIGHLQNLQDLYLVSNQLTI 246



 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/284 (35%), Positives = 145/284 (51%), Gaps = 22/284 (7%)

Query: 3   YNYGSSSSSDSSDSDSFKTVS----IKTLDFSYSSLDSETLATQIELLPNNDYNKKPENI 58
           Y   +  S   + +D  K +     ++TLD S +    +TL  +I          K +N+
Sbjct: 25  YELQAEESESGTYTDLAKALQNPLKVRTLDLSANRF--KTLPKEI---------GKLKNL 73

Query: 59  DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAES 117
             L L  N L+  P    +  NLR L+LS N+I  +P+ I     L +L   NN LT  +
Sbjct: 74  QELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLT--T 131

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LP+++  L+ L+   L  NQL   P +I  +  LK L L  N +  +P+EI KL KL  L
Sbjct: 132 LPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSL 191

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            L  N LT +P   G L  L++L L +NQL +LP  I +L+ L+ L L +N+L  LP EI
Sbjct: 192 GLDNNQLTTLPQEIGQLQNLQSLYLPNNQLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI 251

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             LK     L++L L NN+L TL  EI  L+ L  L LR N L 
Sbjct: 252 GQLK----NLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLT 291



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/242 (38%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 46  LPNNDYNKKPENIDTL----LLY--HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           LPNN     P+ I  L     LY   N L+  P    +  NL+SL+LS N+I  +P+ I 
Sbjct: 124 LPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIE 183

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L +L   NN LT  +LP+++  L+NL+   L  NQL   P +I  +  L+ LYL +
Sbjct: 184 KLQKLQSLGLDNNQLT--TLPQEIGQLQNLQSLYLPNNQLTTLPQEIGHLQNLQDLYLVS 241

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P EI +L  L  L+L  N LT +      L  L++L L  NQL + P  I  LK
Sbjct: 242 NQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIEQLK 301

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+ L L +N+L TLP  I  LK     L++L L +N+L TLP EI  L+ L EL L +N
Sbjct: 302 NLQVLDLGSNQLTTLPEGIGQLK----NLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNN 357

Query: 279 PL 280
            L
Sbjct: 358 QL 359



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 115/209 (55%), Gaps = 14/209 (6%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           ++K+L+ SY+ +  +T+  +IE         K + + +L L +N L+  P    +  NL+
Sbjct: 164 NLKSLNLSYNQI--KTIPKEIE---------KLQKLQSLGLDNNQLTTLPQEIGQLQNLQ 212

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           SL L NN++T LPQ I +   L  L   +N LT   LP ++  LKNL+  NL  N+L   
Sbjct: 213 SLYLPNNQLTTLPQEIGHLQNLQDLYLVSNQLTI--LPNEIGQLKNLQTLNLRNNRLTTL 270

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
             +I  +  LK L L +N L   P+EI +L  L VL LG N LT +P+  G L  L+ L 
Sbjct: 271 SKEIEQLQNLKSLDLRSNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLD 330

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  NQL +LP  I  L+ L+ L L+NN+L
Sbjct: 331 LDSNQLTTLPQEIGQLQNLQELFLNNNQL 359


>gi|418727710|ref|ZP_13286298.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959068|gb|EKO22845.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 423

 Score =  128 bits (321), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 94/226 (41%), Positives = 123/226 (54%), Gaps = 7/226 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K EN+  L LY + L+  P    K  NL  LDLS+N++T LP+ I     L   +  NN 
Sbjct: 182 KLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQ 241

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT   LPK++  L+NL    L  NQL   P +I  +  L+   L NN    +P+EI +L 
Sbjct: 242 LTI--LPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQ 299

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N LT  P   G L +L+ L L +NQL +LP  I  LK LK+L L  N+L+T
Sbjct: 300 NLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQLKT 359

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           +P EI  L    + LK L L NN+L TLP EI  LK L  L+L +N
Sbjct: 360 IPQEIGQL----QNLKLLDLSNNQLTTLPKEIEQLKNLQTLNLWNN 401



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 97/246 (39%), Positives = 128/246 (52%), Gaps = 19/246 (7%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L+L    L+  P    +  NL+ LDL +N++T LP+ I     L  LI   N L
Sbjct: 45  PLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQL 104

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA  LPK++  LKNLKV  L+ NQL   P +I  +  L+ L LGNN L  +P+EI +L  
Sbjct: 105 TA--LPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQN 162

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P   G L  L+ L L ++QL  LP  I  L+ L  L L +N+L  L
Sbjct: 163 LQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTIL 222

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI----------- 282
           P EI  L    + L+  +L NN+L  LP EI  L+ L EL L  N L I           
Sbjct: 223 PKEIGQL----QNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNL 278

Query: 283 -RFVSD 287
            RFV D
Sbjct: 279 QRFVLD 284



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 91/227 (40%), Positives = 123/227 (54%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L +N L+  P    K  NL+ L L  +++T LPQ I     L  L   +N LT
Sbjct: 161 QNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLT 220

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+ F L  NQL   P +I  +  L  LYLG+N L  +P+EI +L  L
Sbjct: 221 I--LPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILPKEIGQLQNL 278

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
               L  N  T +P   G L  L+ L LS NQL + P  I  L+ L++L L NN+L TLP
Sbjct: 279 QRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLTTFPKEIGKLQKLQTLNLWNNQLTTLP 338

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  LK     LK+L L  N+L+T+P EI  L+ L  L L +N L 
Sbjct: 339 EEIEQLK----NLKTLNLSENQLKTIPQEIGQLQNLKLLDLSNNQLT 381



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/229 (39%), Positives = 125/229 (54%), Gaps = 7/229 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           ++ +N+  L L +N L+  P    +  NL+ L LS N++T LP+ I     L  L    +
Sbjct: 135 RQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYES 194

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT   LP+++  L+NL   +LS NQL   P +I  +  L+   L NN L  +P+EI KL
Sbjct: 195 QLTI--LPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKL 252

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             LH L LG N LT +P   G L  L+  +L +NQ   LP  I  L+ L+ L L  N+L 
Sbjct: 253 QNLHELYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLT 312

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           T P EI  L    +KL++L L NN+L TLP EI  LK L  L+L +N L
Sbjct: 313 TFPKEIGKL----QKLQTLNLWNNQLTTLPEEIEQLKNLKTLNLSENQL 357



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/231 (39%), Positives = 123/231 (53%), Gaps = 7/231 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K+ +N+  L L HN L+  P    +  NL+ L L  N++T LP+ I     L  L   NN
Sbjct: 66  KQLQNLKLLDLGHNQLTALPKEIGQLKNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNN 125

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  +LP ++  LKNL++ +L  NQL   P +I  +  L+ LYL  N L  +P+EI KL
Sbjct: 126 QLT--TLPTEIRQLKNLQMLDLGNNQLTILPKEIGQLQNLQELYLSYNQLTTLPKEIGKL 183

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L +LSL  + LT +P   G L  L  L LS NQL  LP  I  L+ L+  +L NN+L 
Sbjct: 184 ENLQLLSLYESQLTILPQEIGKLQNLHELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLT 243

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            LP EI  L+ L E    L L +N+L  LP EI  L+ L    L +N   I
Sbjct: 244 ILPKEIGKLQNLHE----LYLGHNQLTILPKEIGQLQNLQRFVLDNNQFTI 290



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/227 (39%), Positives = 121/227 (53%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L+LY+N L+  P    +  NL+ L L+NN++T LP  I     L  L   NN LT
Sbjct: 92  KNLQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLT 151

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+   LS NQL   P +I  +  L+ L L  + L  +P+EI KL  L
Sbjct: 152 I--LPKEIGQLQNLQELYLSYNQLTTLPKEIGKLENLQLLSLYESQLTILPQEIGKLQNL 209

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
           H L L  N LT +P   G L  L+  +L +NQL  LP  I  L+ L  L L +N+L  LP
Sbjct: 210 HELDLSHNQLTILPKEIGQLQNLQRFVLDNNQLTILPKEIGKLQNLHELYLGHNQLTILP 269

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L    + L+  +L NN+   LP EI  L+ L EL L  N L 
Sbjct: 270 KEIGQL----QNLQRFVLDNNQFTILPKEIGQLQNLQELYLSYNQLT 312



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 77/202 (38%), Positives = 107/202 (52%), Gaps = 16/202 (7%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T + L K + N  +++V  LS  +L   P +I  +  LK L LG+N L  +P+EI +L  
Sbjct: 34  TYQDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLKN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P   G L  L+ L L++NQL +LP  I  LK L+ L L NN+L  L
Sbjct: 94  LQLLILYYNQLTALPKEIGQLKNLKVLFLNNNQLTTLPTEIRQLKNLQMLDLGNNQLTIL 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPP 293
           P EI  L+ L E    L L  N+L TLP EI  L+ L  LSL        + S +T  P 
Sbjct: 154 PKEIGQLQNLQE----LYLSYNQLTTLPKEIGKLENLQLLSL--------YESQLTILPQ 201

Query: 294 SLLELASRTLKVHEIDYSQEHL 315
            + +L +    +HE+D S   L
Sbjct: 202 EIGKLQN----LHELDLSHNQL 219


>gi|421117596|ref|ZP_15577955.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410010810|gb|EKO68942.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 286

 Score =  127 bits (320), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 97/227 (42%), Positives = 124/227 (54%), Gaps = 7/227 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P  +  L L    L   P    +  NL+ L L  N++T LPQ I     L  L  R+N L
Sbjct: 46  PLEVRVLDLSRQKLKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRL 105

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +L KD+  L+NLK  +LS NQL   P +I  +  LK LYL  N     P+EI +L  
Sbjct: 106 T--TLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQN 163

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L VL L  N LT +P+    L +L+ L LSDNQL +LP  I  LK LKSL L  N+L  L
Sbjct: 164 LKVLFLNNNQLTILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTIL 223

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P E+  L    E L++L L NN+L+TLP EI  LK L  L+L +N L
Sbjct: 224 PKEVGQL----ENLQTLDLRNNQLKTLPKEIEQLKNLQTLNLWNNQL 266



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 94/245 (38%), Positives = 130/245 (53%), Gaps = 18/245 (7%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           + ++ LD S   L  +TL  +I  L         +N+  L L++N L+  P    +  NL
Sbjct: 47  LEVRVLDLSRQKL--KTLPIEIGQL---------KNLQRLYLHYNQLTVLPQEIEQLKNL 95

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           + L L +NR+T L + I     L +L   NN LT  +LP ++  LKNLK   LS NQ   
Sbjct: 96  QLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLT--TLPNEIEQLKNLKSLYLSENQFAT 153

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
           FP +I  +  LK L+L NN L  +P EI KL KL  L L  N L  +P     L  L++L
Sbjct: 154 FPKEIGQLQNLKVLFLNNNQLTILPNEIAKLKKLQYLYLSDNQLITLPKEIEQLKNLKSL 213

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            LS NQL  LP  +  L+ L++L L NN+L+TLP EI  LK     L++L L NN+L + 
Sbjct: 214 DLSYNQLTILPKEVGQLENLQTLDLRNNQLKTLPKEIEQLK----NLQTLNLWNNQLSSE 269

Query: 261 PTEII 265
             E I
Sbjct: 270 EKEKI 274



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/168 (41%), Positives = 93/168 (55%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N   ++V +LS  +L+  PI+I  +  L+ LYL  N L  +P+EI +L  
Sbjct: 35  TYRDLTKALQNPLEVRVLDLSRQKLKTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKN 94

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +      L  L++L LS+NQL +LP  I  LK LKSL L  N+  T 
Sbjct: 95  LQLLYLRSNRLTTLSKDIEQLQNLKSLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATF 154

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L    + LK L L+NN+L  LP EI  LK L  L L DN L+
Sbjct: 155 PKEIGQL----QNLKVLFLNNNQLTILPNEIAKLKKLQYLYLSDNQLI 198



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/167 (41%), Positives = 94/167 (56%), Gaps = 4/167 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++LP ++  LKNL+   L  NQL   P +I  +  L+ LYL +N L  + ++I +L  L 
Sbjct: 60  KTLPIEIGQLKNLQRLYLHYNQLTVLPQEIEQLKNLQLLYLRSNRLTTLSKDIEQLQNLK 119

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +P+    L  L++L LS+NQ  + P  I  L+ LK L L+NN+L  LP 
Sbjct: 120 SLDLSNNQLTTLPNEIEQLKNLKSLYLSENQFATFPKEIGQLQNLKVLFLNNNQLTILPN 179

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           EI  LK    KL+ L L +N+L TLP EI  LK L  L L  N L I
Sbjct: 180 EIAKLK----KLQYLYLSDNQLITLPKEIEQLKNLKSLDLSYNQLTI 222


>gi|418687360|ref|ZP_13248519.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410737684|gb|EKQ82423.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 402

 Score =  127 bits (319), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 92/228 (40%), Positives = 125/228 (54%), Gaps = 7/228 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L  N L+  PD   +  NL+ L+L  N++T LP+ I     L  L    N 
Sbjct: 115 KLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNK 174

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT   LP+ +  L+NL++ N  GNQL  FP +I  +  L+ L LG N L  +  E+ +L 
Sbjct: 175 LTI--LPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQ 232

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L +L L  N LT +P   G L +L+ L L  NQL +LP  I  LK L+ L L NN LRT
Sbjct: 233 NLQILDLISNPLTTLPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRT 292

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           LP EI  L    +KL++L L  N++ T P EI  L+ L EL+L  N L
Sbjct: 293 LPKEIEQL----QKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQL 336



 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 124/228 (54%), Gaps = 7/228 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L +N L+  P+   +  NL+ LDL +N +T LP+ I     L  L    N 
Sbjct: 69  KLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNR 128

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT   LP ++  L+NL+V NL  N+L   P +I  +  L+ L L  N L  +P +I +L 
Sbjct: 129 LTI--LPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQ 186

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L +L+  GN LT  P   G L +L+ L L  N+L +L   +  L+ L+ L L +N L T
Sbjct: 187 NLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLTT 246

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           LP EI  L     KL+ L L+ N+L TLP EI  LK L EL L +NPL
Sbjct: 247 LPKEIGQLS----KLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPL 290



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/201 (38%), Positives = 108/201 (53%), Gaps = 7/201 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L    N L+ FP    +   L+ L+L  NR+T L + +     L  L   +N LT
Sbjct: 186 QNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLT 245

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L  L+   L GNQL   P +I  +  L+ LYLGNN L  +P+EI +L KL
Sbjct: 246 --TLPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKL 303

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L GN +T  P   G L  L+ L L  NQL +LP  I  L+ L+ L L  N+L TLP
Sbjct: 304 QTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLATLP 363

Query: 235 TEIITLKCLSEKLKSLLLHNN 255
            E+  L    +KL+ L L+NN
Sbjct: 364 KEVGQL----QKLRKLNLYNN 380



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 91/164 (55%), Gaps = 4/164 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +L K++  L+NL+   L+ NQL   P +I  +  L+ L L +N L  +P+EI KL  L V
Sbjct: 62  TLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQV 121

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+LG N LT +PD  G L  L+ L L  N+L  LP  I  L+ L+ L L  NKL  LP +
Sbjct: 122 LNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEK 181

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L    + L+ L    N+L T P EI  L+ L EL+L  N L
Sbjct: 182 IGQL----QNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRL 221


>gi|421090942|ref|ZP_15551731.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000269|gb|EKO50914.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 400

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/227 (41%), Positives = 124/227 (54%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L +N L   P    +  NL+ L L +N++T LP  I     L  L   NN L 
Sbjct: 115 KNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHLWNNQLM 174

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+++  LKNL+V  LS NQ++  P +I  +  L+ L LGNN L  +P EI +L KL
Sbjct: 175 --TLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQLQKL 232

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             LSL  N LT +P+  G L  L+ L L  NQL  LP  I  LK L++L L +N+L TL 
Sbjct: 233 QELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLS 292

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            +I  L    + LKSL L NN+L T P EI  LK L  L L  N L 
Sbjct: 293 KDIEQL----QNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLT 335



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/226 (39%), Positives = 126/226 (55%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N+  L L++N L   P+   +  NL+ L+LS N+I  +P+ I     L +L   NN LT
Sbjct: 161 KNLQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLT 220

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  LP ++  L+ L+  +LS N+L   P +I  +  L+ LYLG+N L  +P EI +L  L
Sbjct: 221 A--LPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNL 278

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +      L  L++L L +NQL + P  I  LK L+ L L +N+L TLP
Sbjct: 279 QTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLP 338

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  LK     L+   L+NN+L TLP EI  L+ L EL L DN L
Sbjct: 339 KEIGQLK----NLQVFELNNNQLTTLPKEIGQLQNLQELYLIDNQL 380



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 88/229 (38%), Positives = 124/229 (54%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L L    L   P    +  NL+ L LS N++  LP+ I     L  L   +N L
Sbjct: 45  PLDVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHNQL 104

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
             ++LP+++  LKNL+   LS NQL+  P +I  +  L+ LYL +N L  +P EI +L  
Sbjct: 105 --KTLPEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKN 162

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L  +P+  G L  L+ L LS NQ++++P  I  L+ L+SL L NN+L  L
Sbjct: 163 LQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTAL 222

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  L    +KL+ L L  N+L TLP EI  L+ L +L L  N L I
Sbjct: 223 PNEIGQL----QKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTI 267



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/207 (39%), Positives = 106/207 (51%), Gaps = 20/207 (9%)

Query: 94  LPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKY 153
           L +AI N PL   +   +    ++LPK++  L+NL+   LS NQL+  P +I  +  L+ 
Sbjct: 38  LTEAIQN-PLDVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRV 96

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           L L +N L  +P EI +L  L  L L  N L  +P     L  L+ L L DNQL +LP  
Sbjct: 97  LELIHNQLKTLPEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTE 156

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHN 254
           I  LK L+ L L NN+L TLP EI  LK L                    +KL+SL L N
Sbjct: 157 IGQLKNLQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGN 216

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPLV 281
           N+L  LP EI  L+ L ELSL  N L 
Sbjct: 217 NQLTALPNEIGQLQKLQELSLSTNRLT 243



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 94/167 (56%), Gaps = 4/167 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L + + N  +++V +LS  +L+  P +I  +  L+ LYL  N L  +P+EI +L  
Sbjct: 34  TYMDLTEAIQNPLDVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L VL L  N L  +P+    L  L+ L LS NQL++LP  I  L+ L+ L L +N+L TL
Sbjct: 94  LRVLELIHNQLKTLPEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTL 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           PTEI  LK     L+ L L NN+L TLP EI  LK L  L L  N +
Sbjct: 154 PTEIGQLK----NLQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQI 196


>gi|255089435|ref|XP_002506639.1| predicted protein [Micromonas sp. RCC299]
 gi|226521912|gb|ACO67897.1| predicted protein [Micromonas sp. RCC299]
          Length = 392

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/207 (39%), Positives = 108/207 (52%), Gaps = 7/207 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L  N L+  P    + T+L  L L  N++T +P  I     L+ L    N LT  S+P +
Sbjct: 145 LSDNRLTSVPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLT--SVPAE 202

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L +L    LSGN+L   P +I  + +L  L L  N L  VP EI +L  L VL L G
Sbjct: 203 IGRLTSLTYLRLSGNKLTSVPAEIGRLTSLTGLGLDGNKLTSVPAEIGRLTSLTVLRLDG 262

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N LT +P   G L  LE L L  N+L S+PA I  L  L +L L +NKL ++P EI  L 
Sbjct: 263 NRLTSVPAEIGQLTALEGLFLDGNKLTSVPAEIGRLTSLHALFLSDNKLTSVPAEIGRLT 322

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLK 268
            L E      LHNNKL ++P EI  L+
Sbjct: 323 SLRE----FTLHNNKLTSVPAEIWRLR 345



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 116/223 (52%), Gaps = 8/223 (3%)

Query: 61  LLLYHNNLSFFPDNA-SKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESL 118
           L + +N L   P     + T+L  L+LS+NR+T +P  I     L+ L    N LT  S+
Sbjct: 119 LRITNNELEDLPGKIIGRLTSLTGLNLSDNRLTSVPAEIGRLTSLTGLGLDGNKLT--SV 176

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P ++  L +L V  L GN+L   P +I  + +L YL L  N L  VP EI +L  L  L 
Sbjct: 177 PAEIGRLTSLTVLRLDGNRLTSVPAEIGRLTSLTYLRLSGNKLTSVPAEIGRLTSLTGLG 236

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           L GN LT +P   G L  L  L L  N+L S+PA I  L  L+ L L  NKL ++P EI 
Sbjct: 237 LDGNKLTSVPAEIGRLTSLTVLRLDGNRLTSVPAEIGQLTALEGLFLDGNKLTSVPAEIG 296

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L  L     +L L +NKL ++P EI  L  L E +L +N L 
Sbjct: 297 RLTSL----HALFLSDNKLTSVPAEIGRLTSLREFTLHNNKLT 335



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/217 (37%), Positives = 113/217 (52%), Gaps = 8/217 (3%)

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNL 125
           +LS  P +  +   L  L+L NN +T LP+ I+    L+ L   +N LT  S+P ++  L
Sbjct: 56  SLSPAPADLGRLNALWGLNLRNNELTELPEGISGLTSLTDLFLSDNKLT--SVPAEIGQL 113

Query: 126 KNLKVFNLSGNQLEQFPIQILD-IPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
            +LK   ++ N+LE  P +I+  + +L  L L +N L  VP EI +L  L  L L GN L
Sbjct: 114 ASLKDLRITNNELEDLPGKIIGRLTSLTGLNLSDNRLTSVPAEIGRLTSLTGLGLDGNKL 173

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T +P   G L  L  L L  N+L S+PA I  L  L  L L  NKL ++P EI  L  L+
Sbjct: 174 TSVPAEIGRLTSLTVLRLDGNRLTSVPAEIGRLTSLTYLRLSGNKLTSVPAEIGRLTSLT 233

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                L L  NKL ++P EI  L  L+ L L  N L 
Sbjct: 234 ----GLGLDGNKLTSVPAEIGRLTSLTVLRLDGNRLT 266



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 3/97 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L  N L+  P    + T L  L L  N++T +P  I     L  L   +N LT  S+P
Sbjct: 258 LRLDGNRLTSVPAEIGQLTALEGLFLDGNKLTSVPAEIGRLTSLHALFLSDNKLT--SVP 315

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL 156
            ++  L +L+ F L  N+L   P +I  +    Y YL
Sbjct: 316 AEIGRLTSLREFTLHNNKLTSVPAEIWRLRERGYAYL 352


>gi|418686505|ref|ZP_13247671.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410738938|gb|EKQ83670.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 469

 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/229 (38%), Positives = 124/229 (54%), Gaps = 7/229 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K P ++  L L    L   P    +  NL+ L+L+NN++  LP+ I     L  L   NN
Sbjct: 43  KNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQVLELNNN 102

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            L   +LPK++  LKNL+V  L+ NQL   P +I  +  L+ L L NN L  +P+EI +L
Sbjct: 103 QLA--TLPKEIGQLKNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPKEIGQL 160

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L+L  N LT +P+  G L   + L+LS N+L +LP  I  LK L+ L L+ N+  
Sbjct: 161 KNLQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFT 220

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             P EI  LK L +    L L+ N+L+TLP EI  L+ L EL L  N L
Sbjct: 221 AFPKEIGQLKNLQQ----LNLYANQLKTLPNEIGQLQNLRELHLSYNQL 265



 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 96/260 (36%), Positives = 134/260 (51%), Gaps = 18/260 (6%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           + ++ LD S   L  +TL  +I  L         +N+  L L +N L+  P    +  NL
Sbjct: 46  LDVRVLDLSEQKL--KTLPKEIGQL---------QNLQVLELNNNQLATLPKEIGQLKNL 94

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           + L+L+NN++  LP+ I     L  L   NN L   +LPK++  LKNL+V  L+ NQL  
Sbjct: 95  QVLELNNNQLATLPKEIGQLKNLQVLELNNNQLA--TLPKEIGQLKNLQVLELNNNQLAT 152

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +I  +  L++L L  N L  +P EI +L     L L  N LT +P   G L  L  L
Sbjct: 153 LPKEIGQLKNLQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLREL 212

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L+ NQ  + P  I  LK L+ L L+ N+L+TLP EI  L+ L E    L L  N+L+TL
Sbjct: 213 YLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRE----LHLSYNQLKTL 268

Query: 261 PTEIITLKCLSELSLRDNPL 280
             EI  L+ L  L L DN L
Sbjct: 269 SAEIGQLQNLQVLDLNDNQL 288



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 126/228 (55%), Gaps = 9/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLL 113
           +N+  L L  N  + FP    +  NL+ L+L  N++  LP  I     L  L ++ N L 
Sbjct: 207 KNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQL- 265

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
             ++L  ++  L+NL+V +L+ NQL+  P +I  +  L+ L L NN    VP EI +L  
Sbjct: 266 --KTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQLKN 323

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L VL LG N    + +  G L  L+ L L++NQL++L A I  LK L+ L L+ N+L TL
Sbjct: 324 LQVLDLGYNQFKTVSEEIGQLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSLNANQLTTL 383

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  LK L E    L L  N+L+TL  EI  LK L +LSLRDN L 
Sbjct: 384 PNEIRQLKNLRE----LHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLT 427



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 91/246 (36%), Positives = 127/246 (51%), Gaps = 22/246 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L +N L+  P    +  NL+ L+L  N++T LP+ I       TL+   N LT
Sbjct: 138 KNLQVLELNNNQLATLPKEIGQLKNLQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLT 197

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  LKNL+   L+ NQ   FP +I  +  L+ L L  N L  +P EI +L  L
Sbjct: 198 --TLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNL 255

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +    G L  L+ L L+DNQL++LP  I  LK L+ L L+NN+ +T+P
Sbjct: 256 RELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQVLDLNNNQFKTVP 315

Query: 235 TEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            EI  LK L                    + L+ L L+NN+L+TL  EI  LK L  LSL
Sbjct: 316 EEIGQLKNLQVLDLGYNQFKTVSEEIGQLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSL 375

Query: 276 RDNPLV 281
             N L 
Sbjct: 376 NANQLT 381



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 109/199 (54%), Gaps = 5/199 (2%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A Q++ LPN     + +N+  L L +N L        +  NL+ LDL++N++  LP+ I 
Sbjct: 239 ANQLKTLPNEI--GQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIG 296

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L  L   NN    +++P+++  LKNL+V +L  NQ +    +I  +  L+ L+L N
Sbjct: 297 QLKNLQVLDLNNN--QFKTVPEEIGQLKNLQVLDLGYNQFKTVSEEIGQLKNLQMLFLNN 354

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +  EI +L  L +LSL  N LT +P+    L  L  L LS NQL++L A I  LK
Sbjct: 355 NQLKTLSAEIGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLK 414

Query: 219 MLKSLLLHNNKLRTLPTEI 237
            LK L L +N+L TLP EI
Sbjct: 415 NLKKLSLRDNQLTTLPKEI 433



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/180 (38%), Positives = 95/180 (52%), Gaps = 19/180 (10%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           L K + N  +++V +LS  +L+  P +I  +  L+ L L NN L  +P+EI +L  L VL
Sbjct: 38  LTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQVL 97

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            L  N L  +P   G L  L+ L L++NQL +LP  I  LK L+ L L+NN+L TLP EI
Sbjct: 98  ELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLATLPKEI 157

Query: 238 ITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             LK L                    +  ++L+L  N+L TLP EI  LK L EL L  N
Sbjct: 158 GQLKNLQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTN 217



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 4/97 (4%)

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           TD+     +   +  L LS+ +L++LP  I  L+ L+ L L+NN+L TLP EI  LK   
Sbjct: 36  TDLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLK--- 92

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             L+ L L+NN+L TLP EI  LK L  L L +N L 
Sbjct: 93  -NLQVLELNNNQLATLPKEIGQLKNLQVLELNNNQLA 128


>gi|418678197|ref|ZP_13239471.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|418686545|ref|ZP_13247711.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|418740868|ref|ZP_13297244.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|400321387|gb|EJO69247.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|410738978|gb|EKQ83710.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410751463|gb|EKR08440.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 400

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 94/227 (41%), Positives = 124/227 (54%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L +N L   P    +  NL+ L L +N++T LP  I     L  L   NN L 
Sbjct: 115 KNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQLKNLQRLHLWNNQLM 174

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+++  LKNL+V  LS NQ++  P +I  +  L+ L LGNN L  +P EI +L KL
Sbjct: 175 --TLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLTALPNEIGQLQKL 232

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             LSL  N LT +P+  G L  L+ L L  NQL  LP  I  LK L++L L +N+L TL 
Sbjct: 233 QELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLS 292

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            +I  L    + LKSL L NN+L T P EI  LK L  L L  N L 
Sbjct: 293 KDIEQL----QNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLT 335



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 95/261 (36%), Positives = 134/261 (51%), Gaps = 18/261 (6%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           + ++ LD S   L  +TL  +I  L         +N+  L L +N L   P    +  NL
Sbjct: 46  LDVRVLDLSQQKL--KTLPKEIGRL---------QNLQELYLSYNQLKTLPKEIGQLQNL 94

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           R L+L +N++  LP+ I     L  L    N L  ++LPK++  L+NL+   L  NQL  
Sbjct: 95  RVLELIHNQLKTLPEEIEQLKNLQRLYLSYNQL--KTLPKEIRQLQNLQELYLRDNQLTT 152

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +I  +  L+ L+L NN L  +P EI +L  L VL L  N +  IP     L +L++L
Sbjct: 153 LPTEIGQLKNLQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSL 212

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L +NQL +LP  I  L+ L+ L L  N+L TLP EI  L    + L+ L L +N+L  L
Sbjct: 213 GLGNNQLTALPNEIGQLQKLQELSLSTNRLTTLPNEIGQL----QNLQDLYLGSNQLTIL 268

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P EI  LK L  L LR N L 
Sbjct: 269 PNEIGQLKNLQTLYLRSNRLT 289



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/226 (39%), Positives = 126/226 (55%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N+  L L++N L   P+   +  NL+ L+LS N+I  +P+ I     L +L   NN LT
Sbjct: 161 KNLQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLT 220

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  LP ++  L+ L+  +LS N+L   P +I  +  L+ LYLG+N L  +P EI +L  L
Sbjct: 221 A--LPNEIGQLQKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNL 278

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +      L  L++L L +NQL + P  I  LK L+ L L +N+L TLP
Sbjct: 279 QTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLP 338

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  LK     L+   L+NN+L TLP EI  L+ L EL L DN L
Sbjct: 339 KEIGQLK----NLQVFELNNNQLTTLPNEIGQLQNLQELYLIDNQL 380



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 125/231 (54%), Gaps = 7/231 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           + P ++  L L    L   P    +  NL+ L LS N++  LP+ I     L  L   +N
Sbjct: 43  QNPLDVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRVLELIHN 102

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            L  ++LP+++  LKNL+   LS NQL+  P +I  +  L+ LYL +N L  +P EI +L
Sbjct: 103 QL--KTLPEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTEIGQL 160

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L L  N L  +P+  G L  L+ L LS NQ++++P  I  L+ L+SL L NN+L 
Sbjct: 161 KNLQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGNNQLT 220

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            LP EI  L    +KL+ L L  N+L TLP EI  L+ L +L L  N L I
Sbjct: 221 ALPNEIGQL----QKLQELSLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTI 267



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/207 (39%), Positives = 106/207 (51%), Gaps = 20/207 (9%)

Query: 94  LPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKY 153
           L +AI N PL   +   +    ++LPK++  L+NL+   LS NQL+  P +I  +  L+ 
Sbjct: 38  LTEAIQN-PLDVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLRV 96

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           L L +N L  +P EI +L  L  L L  N L  +P     L  L+ L L DNQL +LP  
Sbjct: 97  LELIHNQLKTLPEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTLPTE 156

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHN 254
           I  LK L+ L L NN+L TLP EI  LK L                    +KL+SL L N
Sbjct: 157 IGQLKNLQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQIKTIPKEIEKLQKLQSLGLGN 216

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPLV 281
           N+L  LP EI  L+ L ELSL  N L 
Sbjct: 217 NQLTALPNEIGQLQKLQELSLSTNRLT 243



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 94/167 (56%), Gaps = 4/167 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L + + N  +++V +LS  +L+  P +I  +  L+ LYL  N L  +P+EI +L  
Sbjct: 34  TYMDLTEAIQNPLDVRVLDLSQQKLKTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L VL L  N L  +P+    L  L+ L LS NQL++LP  I  L+ L+ L L +N+L TL
Sbjct: 94  LRVLELIHNQLKTLPEEIEQLKNLQRLYLSYNQLKTLPKEIRQLQNLQELYLRDNQLTTL 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           PTEI  LK     L+ L L NN+L TLP EI  LK L  L L  N +
Sbjct: 154 PTEIGQLK----NLQRLHLWNNQLMTLPEEIGQLKNLQVLELSYNQI 196


>gi|418712123|ref|ZP_13272868.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791390|gb|EKR85066.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 475

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/260 (38%), Positives = 140/260 (53%), Gaps = 18/260 (6%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           +++ LD S++SL   TL  ++  L         EN+  L L+ N L+  P    +  NL+
Sbjct: 118 NLQELDLSFNSLT--TLPKEVGQL---------ENLQRLDLHQNRLATLPMEIGQLKNLQ 166

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
            LDL++N++T LP+ I     L  L    N LT  +LPK++  L+NLK  NL   QL   
Sbjct: 167 ELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLT--TLPKEIGQLQNLKTLNLIVTQLTTL 224

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P +I ++  LK L L +N L  +P+EI +L  L +L L  N +T +P   G L  L+ L 
Sbjct: 225 PKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLD 284

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           L  NQL +LP  I  L+ L+ L LH N+L TLP EI  L+ L E    L L  N+L TLP
Sbjct: 285 LHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQE----LCLDENQLTTLP 340

Query: 262 TEIITLKCLSELSLRDNPLV 281
            EI  L+ L  L L +N L 
Sbjct: 341 KEIEQLQNLRVLDLDNNQLT 360



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/226 (40%), Positives = 119/226 (52%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  P    +  NL  L L  NRIT LP+ I     L  L    N LT
Sbjct: 232 QNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLT 291

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+  +L  NQL   P +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 292 --TLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNL 349

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N LT +P     L  L+ L L  N+L +LP  I  L+ L+ L L +N+L TLP
Sbjct: 350 RVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLP 409

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L+ L E    L L  N+L T P EI  LK L EL L  NPL
Sbjct: 410 KEIGQLQNLQE----LCLDENQLTTFPKEIRQLKNLQELHLYLNPL 451



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 125/226 (55%), Gaps = 7/226 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L+ N L+  P    +  NL++L+L   ++T LP+ I     L TL   +N LT 
Sbjct: 187 NLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLT- 245

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LPK++  L+NL++  L  N++   P +I  +  L++L L  N L  +P+EI +L  L 
Sbjct: 246 -TLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQ 304

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +P   G L  L+ L L +NQL +LP  I  L+ L+ L L NN+L TLP 
Sbjct: 305 RLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPK 364

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           E++ L+     L+ L L +N+L TLP EI  L+ L  L L  N L 
Sbjct: 365 EVLRLQS----LQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLT 406



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/227 (37%), Positives = 120/227 (52%), Gaps = 7/227 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           + P  + TL L +  L+  P    +  NL+ LDLS N +T LP+ +     L  L   + 
Sbjct: 45  QNPLKVRTLDLRYQKLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQ 104

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  +LPK++  L+NL+  +LS N L   P ++  +  L+ L L  N L  +P EI +L
Sbjct: 105 KLT--TLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQL 162

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L L  N LT +P     L  L+ L L  NQL +LP  I  L+ LK+L L   +L 
Sbjct: 163 KNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLT 222

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           TLP EI  L    + LK+L L +N+L TLP EI  L+ L  L LR+N
Sbjct: 223 TLPKEIGEL----QNLKTLNLLDNQLTTLPKEIGELQNLEILVLREN 265



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 81/210 (38%), Positives = 112/210 (53%), Gaps = 15/210 (7%)

Query: 92  THLPQAITN-FPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPT 150
           T L +A+ N   + TL  R   LT   LPK++  L+NL+  +LS N L   P ++  +  
Sbjct: 38  TDLAKALQNPLKVRTLDLRYQKLTI--LPKEIGQLRNLQELDLSFNSLTTLPKEVGQLEN 95

Query: 151 LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           L+ L L +  L  +P+EI +L  L  L L  NSLT +P   G L  L+ L L  N+L +L
Sbjct: 96  LQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATL 155

Query: 211 PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
           P  I  LK L+ L L++NKL TLP EI  L+ L E    L LH N+L TLP EI  L+ L
Sbjct: 156 PMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQE----LDLHRNQLTTLPKEIGQLQNL 211

Query: 271 SELSLRDNPLVIRFVSDMTYKPPSLLELAS 300
             L+L         V+ +T  P  + EL +
Sbjct: 212 KTLNL--------IVTQLTTLPKEIGELQN 233



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 83/178 (46%), Gaps = 26/178 (14%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L+ N L+  P    +  NL+ LDL  N++T LP+ I     L  L    N LT
Sbjct: 278 QNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLT 337

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN--------------- 159
             +LPK++  L+NL+V +L  NQL   P ++L + +L+ L LG+N               
Sbjct: 338 --TLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNL 395

Query: 160 --------SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
                    L  +P+EI +L  L  L L  N LT  P     L  L+ L L  N L S
Sbjct: 396 QVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 453


>gi|428297417|ref|YP_007135723.1| adenylate cyclase [Calothrix sp. PCC 6303]
 gi|428233961|gb|AFY99750.1| Adenylate cyclase [Calothrix sp. PCC 6303]
          Length = 1034

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 90/216 (41%), Positives = 121/216 (56%), Gaps = 7/216 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSN 124
           N L+  PD+    T+L+ L L+NN++  LP +  N   L+ L    N L A  LP+   N
Sbjct: 141 NPLTGLPDSVGNLTSLKHLYLNNNQLKALPDSAGNLTSLTFLDLSENQLNA--LPEAFGN 198

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L +L    LSGNQ+   P  I ++  L+YLYL NN LN +P  I  L  L  L L  N L
Sbjct: 199 LSSLTYLYLSGNQINALPESIGNLTNLRYLYLWNNQLNTLPESIVNLTNLTDLYLSENQL 258

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
             +P+TFG+L  L  L LS NQL +LP +  NL  L  L L++N+L  LP  I  L    
Sbjct: 259 NALPETFGNLSSLTDLYLSGNQLNALPETFGNLSSLTYLYLNSNQLTGLPESIGQLN--- 315

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            KLK L+L++NKL TLP E+  L  L +L +R+N L
Sbjct: 316 -KLKELILYDNKLLTLPQELTKLTQLKKLDIRNNDL 350



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 86/205 (41%), Positives = 112/205 (54%), Gaps = 7/205 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L +N L   PD+A   T+L  LDLS N++  LP+A  N   L+ L    N + A  LP
Sbjct: 159 LYLNNNQLKALPDSAGNLTSLTFLDLSENQLNALPEAFGNLSSLTYLYLSGNQINA--LP 216

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
           + + NL NL+   L  NQL   P  I+++  L  LYL  N LN +P     L  L  L L
Sbjct: 217 ESIGNLTNLRYLYLWNNQLNTLPESIVNLTNLTDLYLSENQLNALPETFGNLSSLTDLYL 276

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
            GN L  +P+TFG+L  L  L L+ NQL  LP SI  L  LK L+L++NKL TLP E+  
Sbjct: 277 SGNQLNALPETFGNLSSLTYLYLNSNQLTGLPESIGQLNKLKELILYDNKLLTLPQELTK 336

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEI 264
           L     +LK L + NN L  LP E+
Sbjct: 337 LT----QLKKLDIRNNDLGELPPEV 357



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 114/221 (51%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L  N LS  P+     T+L  L LS N++  LP+A  N   L  L   NN + A  LP
Sbjct: 44  LYLNRNQLSTLPEAFGNLTSLTHLYLSANQLNALPEAFGNLTSLRYLKLNNNQINA--LP 101

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
           + + NL +L   +LS NQL   P    ++ +L +L L +N L  +P  +  L  L  L L
Sbjct: 102 ESIGNLTSLTSLDLSANQLNALPEAFGNLTSLTFLDLNSNPLTGLPDSVGNLTSLKHLYL 161

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G+L  L  L LS+NQL +LP +  NL  L  L L  N++  LP  I  
Sbjct: 162 NNNQLKALPDSAGNLTSLTFLDLSENQLNALPEAFGNLSSLTYLYLSGNQINALPESIGN 221

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L      L+ L L NN+L TLP  I+ L  L++L L +N L
Sbjct: 222 LT----NLRYLYLWNNQLNTLPESIVNLTNLTDLYLSENQL 258



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 99/199 (49%), Gaps = 7/199 (3%)

Query: 81  LRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
            + L+LS   ++ LP  I N   L+ L    N L+  +LP+   NL +L    LS NQL 
Sbjct: 18  WKELNLSGMDLSELPSEIGNLTSLTDLYLNRNQLS--TLPEAFGNLTSLTHLYLSANQLN 75

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
             P    ++ +L+YL L NN +N +P  I  L  L  L L  N L  +P+ FG+L  L  
Sbjct: 76  ALPEAFGNLTSLRYLKLNNNQINALPESIGNLTSLTSLDLSANQLNALPEAFGNLTSLTF 135

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRT 259
           L L+ N L  LP S+ NL  LK L L+NN+L+ LP     L  L+     L L  N+L  
Sbjct: 136 LDLNSNPLTGLPDSVGNLTSLKHLYLNNNQLKALPDSAGNLTSLT----FLDLSENQLNA 191

Query: 260 LPTEIITLKCLSELSLRDN 278
           LP     L  L+ L L  N
Sbjct: 192 LPEAFGNLSSLTYLYLSGN 210



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 9/132 (6%)

Query: 46  LPNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN  N  PE      N+  L L  N L+  P+     ++L  L LS N++  LP+   
Sbjct: 230 LWNNQLNTLPESIVNLTNLTDLYLSENQLNALPETFGNLSSLTDLYLSGNQLNALPETFG 289

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
           N   L+ L   +N LT   LP+ +  L  LK   L  N+L   P ++  +  LK L + N
Sbjct: 290 NLSSLTYLYLNSNQLTG--LPESIGQLNKLKELILYDNKLLTLPQELTKLTQLKKLDIRN 347

Query: 159 NSLNHVPREINK 170
           N L  +P E+ +
Sbjct: 348 NDLGELPPEVKR 359



 Score = 38.5 bits (88), Expect = 5.1,   Method: Compositional matrix adjust.
 Identities = 34/104 (32%), Positives = 44/104 (42%), Gaps = 19/104 (18%)

Query: 196 QLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE---------- 245
           Q + L LS   L  LP+ I NL  L  L L+ N+L TLP     L  L+           
Sbjct: 17  QWKELNLSGMDLSELPSEIGNLTSLTDLYLNRNQLSTLPEAFGNLTSLTHLYLSANQLNA 76

Query: 246 ---------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
                     L+ L L+NN++  LP  I  L  L+ L L  N L
Sbjct: 77  LPEAFGNLTSLRYLKLNNNQINALPESIGNLTSLTSLDLSANQL 120


>gi|24216020|ref|NP_713501.1| hypothetical protein LA_3321 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075101|ref|YP_005989420.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|24197248|gb|AAN50519.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
           56601]
 gi|353458892|gb|AER03437.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
          Length = 452

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/260 (38%), Positives = 141/260 (54%), Gaps = 18/260 (6%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           +++ LD S++SL   TL  ++  L         EN+  L L+ N L+  P    +  NL+
Sbjct: 95  NLQELDLSFNSLT--TLPKEVGQL---------ENLQRLDLHQNRLATLPMEIGQLKNLQ 143

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
            LDL++N++T LP+ I     L  L   +N LT  +LPK++  L+NLK  NL   QL   
Sbjct: 144 ELDLNSNKLTTLPKEIRQLRNLQELDLNSNKLT--TLPKEIGQLQNLKTLNLIVTQLTTL 201

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P +I ++  LK L L +N L  +P+EI +L  L +L L  N +T +P   G L  L+ L 
Sbjct: 202 PKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLD 261

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           L  NQL +LP  I  L+ L+ L LH N+L TLP EI  L+ L E    L L  N+L TLP
Sbjct: 262 LHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQE----LCLDENQLTTLP 317

Query: 262 TEIITLKCLSELSLRDNPLV 281
            EI  L+ L  L L +N L 
Sbjct: 318 KEIEQLQNLRVLDLDNNQLT 337



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 103/307 (33%), Positives = 149/307 (48%), Gaps = 45/307 (14%)

Query: 3   YNYGSSSSSDSSDSDSFKTVS----IKTLDFSYSSLDSETLATQIELLPNNDYNKKPENI 58
           Y   +  S   + +D  KT+     ++TLD  Y  L   TL  +I  L         +N+
Sbjct: 25  YELQAEESESGTYTDLAKTLQNPLKVRTLDLRYQKLT--TLPKEIGQL---------QNL 73

Query: 59  DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP---------------- 102
             L L  N+L+  P    +  NL+ LDLS N +T LP+ +                    
Sbjct: 74  QRLDLSFNSLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLP 133

Query: 103 --------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYL 154
                   L  L   +N LT  +LPK++  L+NL+  +L+ N+L   P +I  +  LK L
Sbjct: 134 MEIGQLKNLQELDLNSNKLT--TLPKEIRQLRNLQELDLNSNKLTTLPKEIGQLQNLKTL 191

Query: 155 YLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASI 214
            L    L  +P+EI +L  L  L+L  N LT +P   G+L  LE L+L +N++ +LP  I
Sbjct: 192 NLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEI 251

Query: 215 SNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
             L+ L+ L LH N+L TLP EI  L    + L+ L LH N+L TLP EI  L+ L EL 
Sbjct: 252 GQLQNLQWLDLHQNQLTTLPKEIGQL----QNLQRLDLHQNQLTTLPKEIGQLQNLQELC 307

Query: 275 LRDNPLV 281
           L +N L 
Sbjct: 308 LDENQLT 314



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/226 (40%), Positives = 119/226 (52%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  P    +  NL  L L  NRIT LP+ I     L  L    N LT
Sbjct: 209 QNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLT 268

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+  +L  NQL   P +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 269 --TLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNL 326

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N LT +P     L  L+ L L  N+L +LP  I  L+ L+ L L +N+L TLP
Sbjct: 327 RVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLP 386

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L+ L E    L L  N+L T P EI  LK L EL L  NPL
Sbjct: 387 KEIGQLQNLQE----LCLDENQLTTFPKEIRQLKNLQELHLYLNPL 428



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 124/226 (54%), Gaps = 7/226 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L  N L+  P    +  NL++L+L   ++T LP+ I     L TL   +N LT 
Sbjct: 164 NLQELDLNSNKLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLT- 222

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LPK++  L+NL++  L  N++   P +I  +  L++L L  N L  +P+EI +L  L 
Sbjct: 223 -TLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQ 281

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +P   G L  L+ L L +NQL +LP  I  L+ L+ L L NN+L TLP 
Sbjct: 282 RLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPK 341

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           E++ L+     L+ L L +N+L TLP EI  L+ L  L L  N L 
Sbjct: 342 EVLRLQS----LQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLT 383



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 83/178 (46%), Gaps = 26/178 (14%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L+ N L+  P    +  NL+ LDL  N++T LP+ I     L  L    N LT
Sbjct: 255 QNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLT 314

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN--------------- 159
             +LPK++  L+NL+V +L  NQL   P ++L + +L+ L LG+N               
Sbjct: 315 --TLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNL 372

Query: 160 --------SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
                    L  +P+EI +L  L  L L  N LT  P     L  L+ L L  N L S
Sbjct: 373 QVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 430


>gi|418701699|ref|ZP_13262621.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759263|gb|EKR25478.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 498

 Score =  127 bits (318), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 100/260 (38%), Positives = 140/260 (53%), Gaps = 18/260 (6%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           +++ LD S++SL   TL  ++  L         EN+  L L+ N L+  P    +  NL+
Sbjct: 141 NLQELDLSFNSLT--TLPKEVGQL---------ENLQRLDLHQNRLATLPMEIGQLKNLQ 189

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
            LDL++N++T LP+ I     L  L    N LT  +LPK++  L+NLK  NL   QL   
Sbjct: 190 ELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLT--TLPKEIGQLQNLKTLNLIVTQLTTL 247

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P +I ++  LK L L +N L  +P+EI +L  L +L L  N +T +P   G L  L+ L 
Sbjct: 248 PKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLD 307

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           L  NQL +LP  I  L+ L+ L LH N+L TLP EI  L+ L E    L L  N+L TLP
Sbjct: 308 LHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQE----LCLDENQLTTLP 363

Query: 262 TEIITLKCLSELSLRDNPLV 281
            EI  L+ L  L L +N L 
Sbjct: 364 KEIEQLQNLRVLDLDNNQLT 383



 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/226 (40%), Positives = 119/226 (52%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  P    +  NL  L L  NRIT LP+ I     L  L    N LT
Sbjct: 255 QNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLT 314

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+  +L  NQL   P +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 315 --TLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNL 372

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N LT +P     L  L+ L L  N+L +LP  I  L+ L+ L L +N+L TLP
Sbjct: 373 RVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLP 432

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L+ L E    L L  N+L T P EI  LK L EL L  NPL
Sbjct: 433 KEIGQLQNLQE----LCLDENQLTTFPKEIRQLKNLQELHLYLNPL 474



 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 125/226 (55%), Gaps = 7/226 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L+ N L+  P    +  NL++L+L   ++T LP+ I     L TL   +N LT 
Sbjct: 210 NLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLT- 268

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LPK++  L+NL++  L  N++   P +I  +  L++L L  N L  +P+EI +L  L 
Sbjct: 269 -TLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQ 327

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +P   G L  L+ L L +NQL +LP  I  L+ L+ L L NN+L TLP 
Sbjct: 328 RLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLPK 387

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           E++ L+     L+ L L +N+L TLP EI  L+ L  L L  N L 
Sbjct: 388 EVLRLQS----LQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLT 429



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 121/248 (48%), Gaps = 36/248 (14%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNL 112
           + P  + TL L +  L+  P    +  NL+ LDLS N +T                    
Sbjct: 45  QNPLKVRTLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLT-------------------- 84

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
                LPK++  L+NL+  +LS N L   P ++  +  L+ L L +  L  +P+EI +L 
Sbjct: 85  ----ILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLR 140

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  NSLT +P   G L  L+ L L  N+L +LP  I  LK L+ L L++NKL T
Sbjct: 141 NLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTT 200

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKP 292
           LP EI  L+ L E    L LH N+L TLP EI  L+ L  L+L         V+ +T  P
Sbjct: 201 LPKEIRQLRNLQE----LDLHRNQLTTLPKEIGQLQNLKTLNL--------IVTQLTTLP 248

Query: 293 PSLLELAS 300
             + EL +
Sbjct: 249 KEIGELQN 256



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 87/168 (51%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N   ++  +L   +L   P +I  +  L+ L L  NSL  +P+EI +L  
Sbjct: 36  TYTDLAKALQNPLKVRTLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  NSLT +P   G L  L+ L L+  +L +LP  I  L+ L+ L L  N L TL
Sbjct: 96  LQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P E+  L    E L+ L LH N+L TLP EI  LK L EL L  N L 
Sbjct: 156 PKEVGQL----ENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLT 199



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 83/178 (46%), Gaps = 26/178 (14%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L+ N L+  P    +  NL+ LDL  N++T LP+ I     L  L    N LT
Sbjct: 301 QNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLT 360

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN--------------- 159
             +LPK++  L+NL+V +L  NQL   P ++L + +L+ L LG+N               
Sbjct: 361 --TLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNL 418

Query: 160 --------SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
                    L  +P+EI +L  L  L L  N LT  P     L  L+ L L  N L S
Sbjct: 419 QVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 476


>gi|455791544|gb|EMF43351.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 356

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 102/256 (39%), Positives = 137/256 (53%), Gaps = 13/256 (5%)

Query: 27  LDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           LD    +L S+ L T    LP     K+ +N+ +L L +N     P    +  NL+ L+L
Sbjct: 48  LDVRVLNLSSQKLTT----LPKEI--KQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNL 101

Query: 87  SNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI 145
            NN++ +LP+ I     L TLI   N LT  + P+++  LKNL+  NL  NQL     +I
Sbjct: 102 WNNQLKNLPKEIGQLQSLQTLILSVNRLT--TFPQEIGQLKNLQKLNLDYNQLTTLLQEI 159

Query: 146 LDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDN 205
             + +L+ L L  N L  +P EI +L  L  L L  N LT +P+  G L  L+ALIL DN
Sbjct: 160 GQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDN 219

Query: 206 QLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
           QL  LP  I  L+ LK L   NN+L  LP EI  L    +KL+ L L +N+L TLP EI 
Sbjct: 220 QLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQL----QKLQYLYLSHNQLTTLPKEIG 275

Query: 266 TLKCLSELSLRDNPLV 281
            L+ L EL L DN L 
Sbjct: 276 QLENLQELYLNDNQLT 291



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/226 (38%), Positives = 125/226 (55%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +++ TL+L  N L+ FP    +  NL+ L+L  N++T L Q I     L  L    N L 
Sbjct: 117 QSLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLK 176

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  LP ++  L+NL+   LS NQL   P +I  +  L+ L LG+N L  +P+EI +L  L
Sbjct: 177 A--LPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNL 234

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L    N LT +P   G L +L+ L LS NQL +LP  I  L+ L+ L L++N+L TLP
Sbjct: 235 KLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLP 294

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  LK     L++ +  NN+L  LP EI  L+ L  L L +N L
Sbjct: 295 KEIGQLK----NLQTFISFNNQLTMLPNEIGQLQNLQWLKLNNNQL 336



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/166 (42%), Positives = 92/166 (55%), Gaps = 4/166 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++  L+NLK  +L+ NQ +  P +I  +  L+ L L NN L ++P+EI +L  L  
Sbjct: 62  TLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQSLQT 121

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N LT  P   G L  L+ L L  NQL +L   I  L+ L+ L L  N+L+ LP E
Sbjct: 122 LILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNE 181

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           I  L+ L E    L L NN+L  LP EI  LK L  L L DN L I
Sbjct: 182 IGQLQNLQE----LYLSNNQLTILPEEIGQLKNLQALILGDNQLTI 223



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 67/169 (39%), Positives = 91/169 (53%), Gaps = 4/169 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLS  +L   P +I  +  LK L L NN    +P+EI +L  
Sbjct: 36  TYRDLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N L ++P   G L  L+ LILS N+L + P  I  LK L+ L L  N+L TL
Sbjct: 96  LQELNLWNNQLKNLPKEIGQLQSLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
             EI  L+     L+ L L  N+L+ LP EI  L+ L EL L +N L I
Sbjct: 156 LQEIGQLQS----LQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTI 200



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 66/131 (50%), Gaps = 3/131 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N+  L+L  N L+  P    +  NL+ L   NN +T LPQ I     L  L   +N LT
Sbjct: 209 KNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLT 268

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+   L+ NQL   P +I  +  L+     NN L  +P EI +L  L
Sbjct: 269 --TLPKEIGQLENLQELYLNDNQLTTLPKEIGQLKNLQTFISFNNQLTMLPNEIGQLQNL 326

Query: 175 HVLSLGGNSLT 185
             L L  N L+
Sbjct: 327 QWLKLNNNQLS 337



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 3/113 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L   +N L+  P    +   L+ L LS+N++T LP+ I     L  L   +N LT
Sbjct: 232 QNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLT 291

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE 167
             +LPK++  LKNL+ F    NQL   P +I  +  L++L L NN L+    E
Sbjct: 292 --TLPKEIGQLKNLQTFISFNNQLTMLPNEIGQLQNLQWLKLNNNQLSFQEEE 342



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 14/141 (9%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+     +   +  L LS  +L +LP  I  L+ LKSL L NN+ +
Sbjct: 25  CEIQAEKIKPGTYRDLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFK 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYK 291
           TLP EI  L+ L E    L L NN+L+ LP EI  L+ L  L L         V+ +T  
Sbjct: 85  TLPKEIGQLQNLQE----LNLWNNQLKNLPKEIGQLQSLQTLILS--------VNRLTTF 132

Query: 292 PPSLLELASRTLKVHEIDYSQ 312
           P  + +L  + L+   +DY+Q
Sbjct: 133 PQEIGQL--KNLQKLNLDYNQ 151


>gi|418755279|ref|ZP_13311486.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964290|gb|EKO32180.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 267

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/226 (40%), Positives = 121/226 (53%), Gaps = 7/226 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAE 116
           ++ L L +N L+  P+      NL+SL+L NNR+  LP+ I     L  L   NN L   
Sbjct: 28  LEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLITLPKEIGTLQKLEWLYLTNNQLA-- 85

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++  L+ L+   L  NQL   P +I  +  LK L L NN L   P+EI  L KL  
Sbjct: 86  TLPKEIGKLQRLEWLGLENNQLRILPQEIGKLQNLKELILENNRLESFPKEIGTLQKLQH 145

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L  +P   G L  L+ L LSDNQL +LP  I  L+ L+ L L NN+L TLP E
Sbjct: 146 LYLANNQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLATLPKE 205

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           I  L    EKL+ L L  N   T P EI+ LK L  L L++ P ++
Sbjct: 206 IGKL----EKLEDLNLSGNPFTTFPQEIVGLKHLKTLVLQNIPALL 247



 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/202 (43%), Positives = 119/202 (58%), Gaps = 7/202 (3%)

Query: 81  LRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
           L+ L L+NN++T LP  I     L  L   NN LT  +LP+++  L+NL+  NL  N+L 
Sbjct: 5   LKWLHLANNQLTTLPNEIGKLRKLEYLRLENNRLT--TLPEEIGTLQNLQSLNLENNRLI 62

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
             P +I  +  L++LYL NN L  +P+EI KL +L  L L  N L  +P   G L  L+ 
Sbjct: 63  TLPKEIGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRILPQEIGKLQNLKE 122

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRT 259
           LIL +N+LES P  I  L+ L+ L L NN+L TLP EI  L    + LK L L +N+L T
Sbjct: 123 LILENNRLESFPKEIGTLQKLQHLYLANNQLATLPKEIGQL----QNLKDLDLSDNQLVT 178

Query: 260 LPTEIITLKCLSELSLRDNPLV 281
           LP EI TL+ L  LSL++N L 
Sbjct: 179 LPEEIGTLQRLEWLSLKNNQLA 200



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/218 (41%), Positives = 123/218 (56%), Gaps = 7/218 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L +N L+  P+   K   L  L L NNR+T LP+ I     L +L   NN L   +LPK+
Sbjct: 10  LANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLI--TLPKE 67

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L+ L+   L+ NQL   P +I  +  L++L L NN L  +P+EI KL  L  L L  
Sbjct: 68  IGTLQKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRILPQEIGKLQNLKELILEN 127

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L   P   G L +L+ L L++NQL +LP  I  L+ LK L L +N+L TLP EI TL 
Sbjct: 128 NRLESFPKEIGTLQKLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTL- 186

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
              ++L+ L L NN+L TLP EI  L+ L +L+L  NP
Sbjct: 187 ---QRLEWLSLKNNQLATLPKEIGKLEKLEDLNLSGNP 221



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 62/132 (46%), Positives = 81/132 (61%), Gaps = 4/132 (3%)

Query: 149 PTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLE 208
           P LK+L+L NN L  +P EI KL KL  L L  N LT +P+  G L  L++L L +N+L 
Sbjct: 3   PALKWLHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLI 62

Query: 209 SLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLK 268
           +LP  I  L+ L+ L L NN+L TLP EI  L    ++L+ L L NN+LR LP EI  L+
Sbjct: 63  TLPKEIGTLQKLEWLYLTNNQLATLPKEIGKL----QRLEWLGLENNQLRILPQEIGKLQ 118

Query: 269 CLSELSLRDNPL 280
            L EL L +N L
Sbjct: 119 NLKELILENNRL 130



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 4/109 (3%)

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P+  G L +LE L L +N+L +LP  I  L+ L+SL L NN+L TL
Sbjct: 5   LKWLHLANNQLTTLPNEIGKLRKLEYLRLENNRLTTLPEEIGTLQNLQSLNLENNRLITL 64

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI TL    +KL+ L L NN+L TLP EI  L+ L  L L +N L I
Sbjct: 65  PKEIGTL----QKLEWLYLTNNQLATLPKEIGKLQRLEWLGLENNQLRI 109


>gi|422002277|ref|ZP_16349515.1| hypothetical protein LSS_02172 [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|417259209|gb|EKT88588.1| hypothetical protein LSS_02172 [Leptospira santarosai serovar
           Shermani str. LT 821]
          Length = 533

 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/246 (37%), Positives = 130/246 (52%), Gaps = 22/246 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +++  L +++N L   P    K  NL+ L L+ N++T LP+ I     L  L   NN L 
Sbjct: 176 QHLQDLSVFNNQLITLPQEIGKLQNLKYLRLAYNQLTTLPKEIGRLENLQDLNIFNNQLI 235

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+++  L+NL+  NL+ N+L   P +I  +  L++LYL NN L  +P+EI KL KL
Sbjct: 236 --TLPQEIGTLQNLQSLNLANNRLVTLPKEIGTLQKLEWLYLTNNQLATLPQEIGKLQKL 293

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P   G L  L+ LIL +N+LES P  I  L  L+ L L  N+  TLP
Sbjct: 294 EWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNRFTTLP 353

Query: 235 TEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            EI TL  L                    E+L+ L L+NN+L TLP EI TL+ L  L L
Sbjct: 354 EEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLRKLQHLYL 413

Query: 276 RDNPLV 281
            +N L 
Sbjct: 414 ANNQLA 419



 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/249 (39%), Positives = 136/249 (54%), Gaps = 30/249 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI-----------TNFPLS 104
           EN+  L +++N L   P       NL+SL+L+NNR+  LP+ I           TN  L+
Sbjct: 222 ENLQDLNIFNNQLITLPQEIGTLQNLQSLNLANNRLVTLPKEIGTLQKLEWLYLTNNQLA 281

Query: 105 TL---IAR----------NNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
           TL   I +          NN L  +SLP+++  L+NLK   L  N+LE FP +I  +  L
Sbjct: 282 TLPQEIGKLQKLEWLGLTNNQL--KSLPQEIGKLQNLKELILENNRLESFPKEIGTLSNL 339

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           + L+L  N    +P EI  L +L  L+L  N LT +P   G L +LE L L +N+L +LP
Sbjct: 340 QRLHLEYNRFTTLPEEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLP 399

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             I  L+ L+ L L NN+L TLP EI  L    + LK L L +N+L TLP EI TL+ L 
Sbjct: 400 KEIGTLRKLQHLYLANNQLATLPKEIGQL----QNLKDLDLSDNQLVTLPEEIGTLQRLE 455

Query: 272 ELSLRDNPL 280
            LSL++N L
Sbjct: 456 WLSLKNNQL 464



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 91/234 (38%), Positives = 130/234 (55%), Gaps = 7/234 (2%)

Query: 49  NDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLI 107
           N+  K P ++  L L +N L+ FP       NL+ L L+NN++  LP+ I     L  L 
Sbjct: 31  NEALKNPMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLY 90

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE 167
              N L  ++LPK++  L+NL+V +L  NQL   P +I  + +L+ L+L +N L  +P+E
Sbjct: 91  LSENQL--KTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLERLHLEHNQLITLPQE 148

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           I  L  L  L+L  N L  +    G L  L+ L + +NQL +LP  I  L+ LK L L  
Sbjct: 149 IGTLQDLEELNLANNQLRILSKEIGTLQHLQDLSVFNNQLITLPQEIGKLQNLKYLRLAY 208

Query: 228 NKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           N+L TLP EI  L    E L+ L + NN+L TLP EI TL+ L  L+L +N LV
Sbjct: 209 NQLTTLPKEIGRL----ENLQDLNIFNNQLITLPQEIGTLQNLQSLNLANNRLV 258



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/243 (39%), Positives = 128/243 (52%), Gaps = 15/243 (6%)

Query: 46  LPNNDYNKKPENIDTL----LLY--HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN     P+ I+TL     LY   N L   P       NL  LDL  N++  LP  I 
Sbjct: 68  LANNQLKTLPKEIETLQKLKWLYLSENQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIG 127

Query: 100 NF-PLSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
               L  L +  N L+T   LP+++  L++L+  NL+ NQL     +I  +  L+ L + 
Sbjct: 128 KLRSLERLHLEHNQLIT---LPQEIGTLQDLEELNLANNQLRILSKEIGTLQHLQDLSVF 184

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           NN L  +P+EI KL  L  L L  N LT +P   G L  L+ L + +NQL +LP  I  L
Sbjct: 185 NNQLITLPQEIGKLQNLKYLRLAYNQLTTLPKEIGRLENLQDLNIFNNQLITLPQEIGTL 244

Query: 218 KMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRD 277
           + L+SL L NN+L TLP EI TL    +KL+ L L NN+L TLP EI  L+ L  L L +
Sbjct: 245 QNLQSLNLANNRLVTLPKEIGTL----QKLEWLYLTNNQLATLPQEIGKLQKLEWLGLTN 300

Query: 278 NPL 280
           N L
Sbjct: 301 NQL 303



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/213 (38%), Positives = 108/213 (50%), Gaps = 7/213 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K + ++ L L +N L   P    K  NL+ L L NNR+   P+ I     L  L    N 
Sbjct: 289 KLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLSNLQRLHLEYNR 348

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
            T  +LP+++  L  L   NL  NQL   P +I  +  L++L L NN L  +P+EI  L 
Sbjct: 349 FT--TLPEEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLR 406

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  L L  N L  +P   G L  L+ L LSDNQL +LP  I  L+ L+ L L NN+LRT
Sbjct: 407 KLQHLYLANNQLATLPKEIGQLQNLKDLDLSDNQLVTLPEEIGTLQRLEWLSLKNNQLRT 466

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
           L  EI  L    + LK L L  N   T P EI+
Sbjct: 467 LSQEIGQL----QNLKDLDLSGNPFTTFPQEIV 495



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/132 (45%), Positives = 80/132 (60%), Gaps = 4/132 (3%)

Query: 151 LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           ++ L L NN L   PREI  L  L  LSL  N L  +P     L +L+ L LS+NQL++L
Sbjct: 40  VRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLKTL 99

Query: 211 PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
           P  I  L+ L+ L L+ N+LRTLP+EI  L+ L    + L L +N+L TLP EI TL+ L
Sbjct: 100 PKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSL----ERLHLEHNQLITLPQEIGTLQDL 155

Query: 271 SELSLRDNPLVI 282
            EL+L +N L I
Sbjct: 156 EELNLANNQLRI 167


>gi|418744943|ref|ZP_13301288.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794274|gb|EKR92184.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 526

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/229 (41%), Positives = 126/229 (55%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K + ++ L L +N L+  P    K  NL+ L LSNN++T LP+ I     L  L   NN 
Sbjct: 259 KLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQ 318

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LPK++  L+NL+   L  N+L   P +I  +  LK LY   N    VP EI  L 
Sbjct: 319 LT--TLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQ 376

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L+L  N LT +P   G+L  L+ L LSDNQL +LP  I  L+ L+ L L +N+L T
Sbjct: 377 NLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDNQLTT 436

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP EI  L+ L E    L L +N+L TLP EI  L+ L  L L DNPL 
Sbjct: 437 LPKEIGKLQNLQE----LYLRDNQLTTLPKEIENLQSLEYLYLSDNPLT 481



 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/229 (39%), Positives = 123/229 (53%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L  N L   P    K  NL+ L+L+ NR+ +LP+ I     L  L   +N 
Sbjct: 167 KLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTDNQ 226

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LPK++  L+NL+   L+ NQL   P +I  +  L+ L+L NN L  +P+EI KL 
Sbjct: 227 LT--TLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIGKLQ 284

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N LT +P   G L  L+ L L +NQL +LP  I  L+ L+ L L  N+L T
Sbjct: 285 NLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTT 344

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP EI  L    +KLK L    N+  T+P EI  L+ L  L+L  N L 
Sbjct: 345 LPEEIEKL----QKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLT 389



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 88/208 (42%), Positives = 118/208 (56%), Gaps = 9/208 (4%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLTAESLPKDMSNL 125
           L   P    K  NLR LDLS+N++  LP+ I     L  L + RN L    +LP+++  L
Sbjct: 158 LWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRL---ANLPEEIGKL 214

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           +NL+  +L+ NQL   P +I  +  L++L L NN L  +P+EI KL KL  L L  N LT
Sbjct: 215 QNLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLT 274

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
            +P   G L  L+ L LS+NQL +LP  I  L+ L+ L L NN+L TLP EI  L+ L E
Sbjct: 275 TLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQE 334

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSEL 273
               L L  N+L TLP EI  L+ L +L
Sbjct: 335 ----LRLDYNRLTTLPEEIEKLQKLKKL 358



 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 95/252 (37%), Positives = 131/252 (51%), Gaps = 30/252 (11%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K +N+  L L  N L+  P    K  NL+ L L+NN++T LP+ I     L  L   NN 
Sbjct: 213 KLQNLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQ 272

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LPK++  L+NL+   LS NQL   P +I  +  L+ L+L NN L  +P+EI KL 
Sbjct: 273 LT--TLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQ 330

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLH------ 226
            L  L L  N LT +P+    L +L+ L  S NQ  ++P  I NL+ L++L L+      
Sbjct: 331 NLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTS 390

Query: 227 -----------------NNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
                            +N+L TLP EI  L    + L+ L L +N+L TLP EI  L+ 
Sbjct: 391 LPKEIGNLQNLQLLYLSDNQLATLPKEIGKL----QNLQLLYLSDNQLTTLPKEIGKLQN 446

Query: 270 LSELSLRDNPLV 281
           L EL LRDN L 
Sbjct: 447 LQELYLRDNQLT 458



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/212 (38%), Positives = 116/212 (54%), Gaps = 7/212 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K +++  L L +N L+  P    K  NL+ L L  NR+T LP+ I     L  L +  N 
Sbjct: 305 KLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQ 364

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
            T  ++P+++ NL+NL+  NL  NQL   P +I ++  L+ LYL +N L  +P+EI KL 
Sbjct: 365 FT--TVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQ 422

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L +L L  N LT +P   G L  L+ L L DNQL +LP  I NL+ L+ L L +N L +
Sbjct: 423 NLQLLYLSDNQLTTLPKEIGKLQNLQELYLRDNQLTTLPKEIENLQSLEYLYLSDNPLTS 482

Query: 233 LPTEIITLKCLS----EKLKSLLLHNNKLRTL 260
            P EI  L+ L     E + +LL    K+R L
Sbjct: 483 FPEEIGKLQHLKWFRLENIPTLLPQKEKIRKL 514



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 96/165 (58%), Gaps = 4/165 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++  L+NL+  +LS NQL   P +I  +  L+ L L  N L ++P EI KL  L  
Sbjct: 160 TLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQE 219

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N LT +P     L  L+ L L++NQL +LP  I  L+ L++L L NN+L TLP E
Sbjct: 220 LHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKE 279

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I  L    + L+ L L NN+L TLP EI  L+ L EL L +N L 
Sbjct: 280 IGKL----QNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLT 320



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/148 (42%), Positives = 87/148 (58%), Gaps = 4/148 (2%)

Query: 134 SGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGD 193
           S + L   P +I  +  L+ L L +N L  +P+EI KL  L  L+L  N L ++P+  G 
Sbjct: 154 SNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGK 213

Query: 194 LYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLH 253
           L  L+ L L+DNQL +LP  I  L+ L+ L L+NN+L TLP EI  L    +KL++L L 
Sbjct: 214 LQNLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKL----QKLEALHLE 269

Query: 254 NNKLRTLPTEIITLKCLSELSLRDNPLV 281
           NN+L TLP EI  L+ L  L L +N L 
Sbjct: 270 NNQLTTLPKEIGKLQNLQWLGLSNNQLT 297


>gi|421084250|ref|ZP_15545113.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|410433150|gb|EKP77498.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 429

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/228 (40%), Positives = 124/228 (54%), Gaps = 11/228 (4%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +  NL+ LDL  N++T LP+ I     L TL    NL+ 
Sbjct: 186 KNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTL----NLIV 241

Query: 115 AE--SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
            +  +LPK++  L+NLK  NL  NQL   P +I ++  L+ L L  N +  +P+EI +L 
Sbjct: 242 TQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQ 301

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N LT +P   G L  L+ L L +NQL +LP  I  L+ L+ L L NN+L T
Sbjct: 302 NLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTT 361

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           LP EI  L+ L E    L L  N+L T P EI  LK L EL L  NPL
Sbjct: 362 LPKEIGQLQNLQE----LCLDENQLTTFPKEIRQLKNLQELHLYLNPL 405



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 123/228 (53%), Gaps = 7/228 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L+L    L+  P    +  NL+ LDL +N++T LP+ I     L  L    N L
Sbjct: 47  PLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSL 106

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +LPK++  L+NL+  NL+  +L   P +I  +  L+ L L  NSL  +P+E+ +L  
Sbjct: 107 T--TLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLEN 164

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L  +P   G L  L+ L L+ N+L +LP  I  L+ L+ L LH N+L TL
Sbjct: 165 LQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL 224

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L    + LK+L L   +L TLP EI  L+ L  L+L DN L 
Sbjct: 225 PKEIGQL----QNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLT 268



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 61/133 (45%), Gaps = 19/133 (14%)

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           IN  CK+    +   +  D+     +   +  LILS+ +L +LP  I  L+ LK L L +
Sbjct: 21  INLSCKIQAEEVEPEAYQDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGH 80

Query: 228 NKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLK 268
           N+L  LP EI  L+ L                    E L+ L L++ KL TLP EI  L+
Sbjct: 81  NQLTALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLR 140

Query: 269 CLSELSLRDNPLV 281
            L EL L  N L 
Sbjct: 141 NLQELDLSFNSLT 153


>gi|456982914|gb|EMG19366.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 432

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/228 (40%), Positives = 124/228 (54%), Gaps = 11/228 (4%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +  NL+ LDL  N++T LP+ I     L TL    NL+ 
Sbjct: 186 KNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTL----NLIV 241

Query: 115 AE--SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
            +  +LPK++  L+NLK  NL  NQL   P +I ++  L+ L L  N +  +P+EI +L 
Sbjct: 242 TQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQ 301

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N LT +P   G L  L+ L L +NQL +LP  I  L+ L+ L L NN+L T
Sbjct: 302 NLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTT 361

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           LP EI  L+ L E    L L  N+L T P EI  LK L EL L  NPL
Sbjct: 362 LPKEIGQLQNLQE----LCLDENQLTTFPKEIRQLKNLQELHLYLNPL 405



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 123/228 (53%), Gaps = 7/228 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L+L    L+  P    +  NL+ LDL +N++T LP+ I     L  L    N L
Sbjct: 47  PLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSL 106

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +LPK++  L+NL+  NL+  +L   P +I  +  L+ L L  NSL  +P+E+ +L  
Sbjct: 107 T--TLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLEN 164

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L  +P   G L  L+ L L+ N+L +LP  I  L+ L+ L LH N+L TL
Sbjct: 165 LQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTL 224

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L    + LK+L L   +L TLP EI  L+ L  L+L DN L 
Sbjct: 225 PKEIGQL----QNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLT 268



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 61/133 (45%), Gaps = 19/133 (14%)

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           IN  CK+    +   +  D+     +   +  LILS+ +L +LP  I  L+ LK L L +
Sbjct: 21  INLSCKIQAEEVEPEAYQDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGH 80

Query: 228 NKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLK 268
           N+L  LP EI  L+ L                    E L+ L L++ KL TLP EI  L+
Sbjct: 81  NQLTALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLR 140

Query: 269 CLSELSLRDNPLV 281
            L EL L  N L 
Sbjct: 141 NLQELDLSFNSLT 153


>gi|418743909|ref|ZP_13300268.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410795304|gb|EKR93201.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 360

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 103/288 (35%), Positives = 141/288 (48%), Gaps = 43/288 (14%)

Query: 24  IKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRS 83
           ++ LD  Y+ L   TL  +I  L          N+ +L L  N+LS  P+      NL+ 
Sbjct: 70  LRKLDLRYNQLT--TLPKEIGQL---------HNLQSLCLLGNSLSTLPEEIGHLKNLKE 118

Query: 84  LDLSNNRITHLPQAITNFP----------LSTLIARNNLLTAESLPKDMSNLKNLKVFNL 133
           L LS+N +  LP+ I              L +LI R+  +    + +++ +L+NLK  NL
Sbjct: 119 LSLSHNLLITLPENIGRLQNLEVLDLSVNLRSLIFRSEEI---GISEEIGDLQNLKELNL 175

Query: 134 SGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGD 193
           +GN+L   P +I  + +L+ L L  NSL  +P+EI +L  L  LSL GN LT  P   G 
Sbjct: 176 TGNRLTMLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQNLKRLSLKGNRLTTFPKEIGK 235

Query: 194 LYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE-------- 245
           L  LE L LS+N L  LP  IS  + L+ L L  N+L TLP EI  LK L E        
Sbjct: 236 LQNLEELDLSENLLAILPKEISRFQNLRELSLEGNRLSTLPKEIGRLKNLKELSLGGNRL 295

Query: 246 -----------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
                       L  L L  N+L TLP EI  L+CL  L+L  NPL +
Sbjct: 296 TTLPKEIGKFQNLIELRLEGNRLTTLPKEIGKLQCLWSLNLSKNPLSV 343



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/195 (37%), Positives = 95/195 (48%), Gaps = 29/195 (14%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           +SLP+ ++NLKNL+  +L  NQL   P +I  +  L+ L L  NSL+ +P EI  L  L 
Sbjct: 58  KSLPRQIANLKNLRKLDLRYNQLTTLPKEIGQLHNLQSLCLLGNSLSTLPEEIGHLKNLK 117

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL---------PASISNLKMLKSLLLH 226
            LSL  N L  +P+  G L  LE L LS N L SL            I +L+ LK L L 
Sbjct: 118 ELSLSHNLLITLPENIGRLQNLEVLDLSVN-LRSLIFRSEEIGISEEIGDLQNLKELNLT 176

Query: 227 NNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITL 267
            N+L  LP EI  L+ L                    + LK L L  N+L T P EI  L
Sbjct: 177 GNRLTMLPKEIGKLQSLEKLDLSENSLAILPKEIGRLQNLKRLSLKGNRLTTFPKEIGKL 236

Query: 268 KCLSELSLRDNPLVI 282
           + L EL L +N L I
Sbjct: 237 QNLEELDLSENLLAI 251



 Score = 68.9 bits (167), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/158 (37%), Positives = 86/158 (54%), Gaps = 6/158 (3%)

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
           +  LS  +++  P QI ++  L+ L L  N L  +P+EI +L  L  L L GNSL+ +P+
Sbjct: 49  ILYLSNQEIKSLPRQIANLKNLRKLDLRYNQLTTLPKEIGQLHNLQSLCLLGNSLSTLPE 108

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL---PTEIITLKCLS-- 244
             G L  L+ L LS N L +LP +I  L+ L+ L L  N LR+L     EI   + +   
Sbjct: 109 EIGHLKNLKELSLSHNLLITLPENIGRLQNLEVLDLSVN-LRSLIFRSEEIGISEEIGDL 167

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           + LK L L  N+L  LP EI  L+ L +L L +N L I
Sbjct: 168 QNLKELNLTGNRLTMLPKEIGKLQSLEKLDLSENSLAI 205


>gi|421090943|ref|ZP_15551732.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000270|gb|EKO50915.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 376

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 110/316 (34%), Positives = 152/316 (48%), Gaps = 35/316 (11%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L  N L+  P    +  NLR L+L +N+ T LP+ +     L  L   +N 
Sbjct: 67  KLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKELSLGSNR 126

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP ++  LKNL+V  L+ NQ +  P +I  +  L+ L LGNN L  +P EI +L 
Sbjct: 127 LT--TLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQ 184

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L LG N LT +P+  G L +L+ L LS N+L +LP  I  L+ L+ L L +N+L  
Sbjct: 185 NLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTI 244

Query: 233 LPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           LP EI  LK L                    + LKSL L NN+L T P EI  LK L  L
Sbjct: 245 LPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVL 304

Query: 274 SLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAH------ 327
            L  N L          K   +L+L S  L     +  Q    QNL  YL +        
Sbjct: 305 DLGSNQLTTLPEEIEQLKNLQVLDLGSNQLTTIPKEIGQ---LQNLQLYLNNNQLSSEEK 361

Query: 328 ---HCVNPKCKGVFFD 340
                + PKC+ ++F+
Sbjct: 362 ERIRKLLPKCQ-IYFE 376



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/230 (40%), Positives = 124/230 (53%), Gaps = 7/230 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           +K EN+  L L  N L+  P+   +  NLR L L++N+   +P+ I     L TL   NN
Sbjct: 112 EKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNN 171

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LTA  LP ++  L+NLK  +L  N+L   P +I  +  L+ LYL  N L  +P EI +L
Sbjct: 172 QLTA--LPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQL 229

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L LG N LT +P+  G L  L+ L L  N+L +L   I  L+ LKSL L NN+L 
Sbjct: 230 QNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLT 289

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           T P EI  LK     L+ L L +N+L TLP EI  LK L  L L  N L 
Sbjct: 290 TFPKEIEQLK----NLQVLDLGSNQLTTLPEEIEQLKNLQVLDLGSNQLT 335



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/230 (37%), Positives = 122/230 (53%), Gaps = 7/230 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           + P ++  L L  N     P    K  NL+ L+L+ N++T LP+ I     L  L   +N
Sbjct: 43  QNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDN 102

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
             T   LPK++  L+NLK  +L  N+L   P +I  +  L+ L L +N    +P+EI +L
Sbjct: 103 QFTI--LPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQL 160

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L+LG N LT +P+  G L  L++L L  N+L +LP  I  L+ L+ L L  N+L 
Sbjct: 161 KNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLT 220

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           TLP EI  L+ L E    L L +N+L  LP EI  LK L  L LR N L 
Sbjct: 221 TLPNEIGQLQNLQE----LYLGSNQLTILPNEIGQLKNLQTLYLRSNRLT 266



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/168 (37%), Positives = 89/168 (52%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLS N+ +  P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 34  TYRDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N  T +P     L  L+ L L  N+L +LP  I  LK L+ L L +N+ +T+
Sbjct: 94  LRKLNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTI 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  LK     L++L L NN+L  LP EI  L+ L  L L  N L 
Sbjct: 154 PKEIGQLK----NLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLT 197



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 78/141 (55%), Gaps = 10/141 (7%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           + Q+ +LPN     K  N+ TL L  N L+    +  +  NL+SLDL NN++T  P+ I 
Sbjct: 239 SNQLTILPNEIGQLK--NLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIE 296

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L  L   +N LT  +LP+++  LKNL+V +L  NQL   P +I  +  L+ LYL N
Sbjct: 297 QLKNLQVLDLGSNQLT--TLPEEIEQLKNLQVLDLGSNQLTTIPKEIGQLQNLQ-LYLNN 353

Query: 159 NSLNHVPRE-INKL---CKLH 175
           N L+   +E I KL   C+++
Sbjct: 354 NQLSSEEKERIRKLLPKCQIY 374


>gi|398338577|ref|ZP_10523280.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
 gi|418675895|ref|ZP_13237181.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400323660|gb|EJO71508.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 281

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/226 (42%), Positives = 125/226 (55%), Gaps = 7/226 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLL 113
           P ++ TL L  N L+  P    K   L SLDLSNN++  LP+ I     L  L   +N L
Sbjct: 36  PMDVRTLDLSKNQLTTLPKEIEKLKELESLDLSNNQLVTLPKEIGKLQKLRYLYLDHNQL 95

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +LPK++  LK+L+  +L  NQL   P +I  +  L+ L L NN L  +P+EI  L K
Sbjct: 96  T--TLPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKK 153

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L VL L  N LT IP   G L +L+ L L +NQL +LP  I  L+ L  L L  N+L TL
Sbjct: 154 LQVLDLNDNQLTTIPKEIGYLKKLQELYLINNQLTTLPKEIGYLEELWLLDLRKNQLTTL 213

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           P EI  L    +KL+ L L NN+  T P EI  L+ L+ L+L D P
Sbjct: 214 PKEIGKL----QKLEKLYLKNNQFTTFPKEIGKLQKLNTLNLDDIP 255



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/202 (40%), Positives = 109/202 (53%), Gaps = 28/202 (13%)

Query: 80  NLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
           ++R+LDLS N++T                        +LPK++  LK L+  +LS NQL 
Sbjct: 38  DVRTLDLSKNQLT------------------------TLPKEIEKLKELESLDLSNNQLV 73

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
             P +I  +  L+YLYL +N L  +P+EI  L  L  L L  N LT +P     L  LE+
Sbjct: 74  TLPKEIGKLQKLRYLYLDHNQLTTLPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKDLES 133

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRT 259
           L L +NQL +LP  I  LK L+ L L++N+L T+P EI  LK    KL+ L L NN+L T
Sbjct: 134 LDLRNNQLTTLPKEIEYLKKLQVLDLNDNQLTTIPKEIGYLK----KLQELYLINNQLTT 189

Query: 260 LPTEIITLKCLSELSLRDNPLV 281
           LP EI  L+ L  L LR N L 
Sbjct: 190 LPKEIGYLEELWLLDLRKNQLT 211


>gi|45656721|ref|YP_000807.1| lipoprotein [Leptospira interrogans serovar Copenhageni str.
           Fiocruz L1-130]
 gi|421102937|ref|ZP_15563539.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45599957|gb|AAS69444.1| putative lipoprotein [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|410367252|gb|EKP22638.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
          Length = 521

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/228 (40%), Positives = 124/228 (54%), Gaps = 11/228 (4%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +  NL+ LDL  N++T LP+ I     L TL    NL+ 
Sbjct: 278 KNLQELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTL----NLIV 333

Query: 115 AE--SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
            +  +LPK++  L+NLK  NL  NQL   P +I ++  L+ L L  N +  +P+EI +L 
Sbjct: 334 TQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQ 393

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N LT +P   G L  L+ L L +NQL +LP  I  L+ L+ L L NN+L T
Sbjct: 394 NLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTT 453

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           LP EI  L+ L E    L L  N+L T P EI  LK L EL L  NPL
Sbjct: 454 LPKEIGQLQNLQE----LCLDENQLTTFPKEIRQLKNLQELHLYLNPL 497



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/253 (37%), Positives = 128/253 (50%), Gaps = 30/253 (11%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLP----------------Q 96
           K+ +N+  L L HN L+  P    +  NL+ LDLS N +T LP                Q
Sbjct: 68  KQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQ 127

Query: 97  AITNFPLSTLIARN--------NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDI 148
            +T  P      RN        N LT  +LPK++  L+NL+  NL+  +L   P +I  +
Sbjct: 128 KLTTLPKEIGQLRNLQELDLSFNSLT--TLPKEVGQLENLQRLNLNSQKLTTLPKEIGQL 185

Query: 149 PTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLE 208
             L+ L L  NSL  +P+E+ +L  L  L+L    LT +P   G L  L+ L LS N L 
Sbjct: 186 RNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLT 245

Query: 209 SLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLK 268
           +LP  +  L+ L+ L LH N+L TLP EI  LK L E    L L++NKL TLP EI  L+
Sbjct: 246 TLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQE----LDLNSNKLTTLPKEIRQLR 301

Query: 269 CLSELSLRDNPLV 281
            L EL L  N L 
Sbjct: 302 NLQELDLHRNQLT 314



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 100/279 (35%), Positives = 144/279 (51%), Gaps = 26/279 (9%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           +++ LD S++SL   TL  ++  L         EN+  L L    L+  P    +  NL+
Sbjct: 95  NLQELDLSFNSLT--TLPKEVGQL---------ENLQRLNLNSQKLTTLPKEIGQLRNLQ 143

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
            LDLS N +T LP+ +     L  L   +  LT  +LPK++  L+NL+  +LS N L   
Sbjct: 144 ELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLT--TLPKEIGQLRNLQELDLSFNSLTTL 201

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P ++  +  L+ L L +  L  +P+EI +L  L  L L  NSLT +P   G L  L+ L 
Sbjct: 202 PKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLD 261

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           L  N+L +LP  I  LK L+ L L++NKL TLP EI  L+ L E    L LH N+L TLP
Sbjct: 262 LHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNLQE----LDLHRNQLTTLP 317

Query: 262 TEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELAS 300
            EI  L+ L  L+L         V+ +T  P  + EL +
Sbjct: 318 KEIGQLQNLKTLNL--------IVTQLTTLPKEIGELQN 348



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 69/184 (37%), Positives = 96/184 (52%), Gaps = 19/184 (10%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++  L+NLK+ +L  NQL   P +I  +  L+ L L  NSL  +P+E+ +L  L  
Sbjct: 62  TLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQR 121

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+L    LT +P   G L  L+ L LS N L +LP  +  L+ L+ L L++ KL TLP E
Sbjct: 122 LNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKE 181

Query: 237 IITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRD 277
           I  L+ L                    E L+ L L++ KL TLP EI  L+ L EL L  
Sbjct: 182 IGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSF 241

Query: 278 NPLV 281
           N L 
Sbjct: 242 NSLT 245



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 66/166 (39%), Positives = 90/166 (54%), Gaps = 4/166 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           + L K + N  +++V  LS  +L   P +I  +  LK L LG+N L  +P+EI +L  L 
Sbjct: 38  QDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGHNQLTALPKEIGQLRNLQ 97

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  NSLT +P   G L  L+ L L+  +L +LP  I  L+ L+ L L  N L TLP 
Sbjct: 98  ELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPK 157

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           E+  L    E L+ L L++ KL TLP EI  L+ L EL L  N L 
Sbjct: 158 EVGQL----ENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLT 199



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 61/133 (45%), Gaps = 19/133 (14%)

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           IN  CK+    +   +  D+     +   +  LILS+ +L +LP  I  L+ LK L L +
Sbjct: 21  INLSCKIQAEEVEPEAYQDLTKALQNPLDVRVLILSEQKLTTLPKEIKQLQNLKLLDLGH 80

Query: 228 NKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLK 268
           N+L  LP EI  L+ L                    E L+ L L++ KL TLP EI  L+
Sbjct: 81  NQLTALPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLR 140

Query: 269 CLSELSLRDNPLV 281
            L EL L  N L 
Sbjct: 141 NLQELDLSFNSLT 153


>gi|418726611|ref|ZP_13285222.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960521|gb|EKO24275.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 447

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 91/221 (41%), Positives = 117/221 (52%), Gaps = 7/221 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L  FP    +  NL++L+L +N++  LP  I     L  L  R N LT
Sbjct: 117 QNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLT 176

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+  NL  NQL   P++I  +  L+ L L  N L   P+EI +L  L
Sbjct: 177 V--LPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENL 234

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  LE L LS+NQL + P  I  LK L+ L L  N+L  LP
Sbjct: 235 QELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILP 294

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            EI  L    EKL+ L L  N+L  LP EI  LK L  L L
Sbjct: 295 KEIGQL----EKLQDLGLSYNRLVILPKEIGQLKNLQMLDL 331



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 92/229 (40%), Positives = 123/229 (53%), Gaps = 9/229 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLL 113
           +N+  L L  N L+ FP    +   L SLDLS NR+  LP  I     L  L + +N L+
Sbjct: 71  KNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLI 130

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T    PK++  L+NL+  NL  NQL   P++I  +  L+ L L  N L  +P+EI +L  
Sbjct: 131 T---FPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQN 187

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N L  +P   G L  L+ L LS+NQL + P  I  L+ L+ L L NN+L  L
Sbjct: 188 LQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLWNNRLTAL 247

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK     L++L L  N+L T P EI  LK L +L L  N LVI
Sbjct: 248 PKEIGQLK----NLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVI 292



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 93/226 (41%), Positives = 119/226 (52%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  P    +  NL++L LS N++T  P+ I     L  L   NN LT
Sbjct: 186 QNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLWNNRLT 245

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  LPK++  LKNL+   LS NQL  FP +I  +  L+ L L  N L  +P+EI +L KL
Sbjct: 246 A--LPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKL 303

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P   G L  L+ L L  NQ +++   I  LK L  L L  N+L TLP
Sbjct: 304 QDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKKIGQLKNLLQLNLSYNQLATLP 363

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  LK     L +L L  N+L TLP EI  LK L  L L  N L
Sbjct: 364 AEIGQLK----NLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQL 405



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 91/164 (55%), Gaps = 4/164 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++  LKNL+  +L  NQL  FP  I+++  L+ L L  N L  +P EI +L  L  
Sbjct: 62  TLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQE 121

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L   P   G L  L+ L L DNQL +LP  I  L+ L+ L L  N+L  LP E
Sbjct: 122 LGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKE 181

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L    + L++L L +N+L TLP EI  L+ L  L L +N L
Sbjct: 182 IGQL----QNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQL 221



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 67/168 (39%), Positives = 90/168 (53%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  N++V NLSG      P +I  +  L+ L LG+N L   P  I +L K
Sbjct: 36  TYMDLTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQK 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L  +P+  G L  L+ L L  N+L + P  I  L+ L++L L +N+L TL
Sbjct: 96  LESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L+ L EKL    L  N+L  LP EI  L+ L  L+L+DN L 
Sbjct: 156 PVEIGQLQNL-EKLN---LRKNRLTVLPKEIGQLQNLQTLNLQDNQLA 199



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 59/161 (36%), Positives = 80/161 (49%), Gaps = 3/161 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N L+ FP    +   L+ L LS NR+  LP+ I     L  L    N L 
Sbjct: 255 KNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLV 314

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  LKNL++ +L  NQ +    +I  +  L  L L  N L  +P EI +L  L
Sbjct: 315 I--LPKEIGQLKNLQMLDLCYNQFKTVSKKIGQLKNLLQLNLSYNQLATLPAEIGQLKNL 372

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           + L LG N LT +P   G L  L  L L  NQL +LP  I 
Sbjct: 373 YNLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLTTLPKEIG 413


>gi|421123429|ref|ZP_15583709.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410343480|gb|EKO94711.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 267

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/250 (37%), Positives = 128/250 (51%), Gaps = 7/250 (2%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           L   P     F NL  L+L  N++T LP+ I     L  L    N  T  SLPK++  L+
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFT--SLPKEIGQLQ 63

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL+  +L GNQ    P +I  +  L+ L L  N    +P+EI +L KL VL+L GN  T 
Sbjct: 64  NLERLDLDGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQKLRVLNLAGNQFTS 123

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P   G L +LEAL L  N+    P  I   + LK L L  ++L+TLP EI+ L    + 
Sbjct: 124 LPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLL----QN 179

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVH 306
           L+SL L  N+L +LP EI  L+ L EL+L+DN L          +   +L L S +  + 
Sbjct: 180 LQSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLK 239

Query: 307 EIDYSQEHLP 316
           E    QE LP
Sbjct: 240 EKQKIQELLP 249



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 64/123 (52%), Gaps = 4/123 (3%)

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           +G + L  +PR I     L  L+L GN LT +P   G L  L  L L+ NQ  SLP  I 
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            L+ L+ L L  N+  +LP EI  L    +KL+ L L  N+  +LP EI  L+ L  L+L
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEIGQL----QKLRVLNLAGNQFTSLPKEIGQLQKLRVLNL 116

Query: 276 RDN 278
             N
Sbjct: 117 AGN 119


>gi|418670643|ref|ZP_13232008.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410753625|gb|EKR15289.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 264

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 93/236 (39%), Positives = 137/236 (58%), Gaps = 18/236 (7%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           +++TLD S + L  +TL+ +I  L         +N+ TL L ++ L+  P    +  NL+
Sbjct: 26  NLQTLDLSSNQL--KTLSKEIVQL---------KNLQTLHLGYSQLTTLPKEIKQLKNLQ 74

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           +LDL  N++T LP+ I     L TL    N LT   LP+++  LKNL+  +LS NQL+  
Sbjct: 75  TLDLYYNQLTTLPKEIEQLKNLQTLGLGYNRLTI--LPQEIGQLKNLQTLDLSSNQLKTL 132

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
             +I+ +  L+ L+LGNN L  +P+EI ++  L  L LG N LT +P   G L  L+ L 
Sbjct: 133 SKEIVQLKNLQTLHLGNNQLTTLPKEIEQMQNLQSLGLGYNQLTALPKEIGQLKNLQELN 192

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
           L +NQL +LP  I  L+ LKSL L NN+L+ LP EI  LK     L++L L+NN+L
Sbjct: 193 LWNNQLTTLPIEIGQLQSLKSLDLGNNQLKILPKEIGQLK----NLQTLYLNNNQL 244



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/252 (37%), Positives = 129/252 (51%), Gaps = 30/252 (11%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL LY+N +   P    +  NL++LDLS+N++  L + I     L TL    + LT
Sbjct: 2   KNLQTLGLYYNQIKTIPKEIGQLKNLQTLDLSSNQLKTLSKEIVQLKNLQTLHLGYSQLT 61

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  LKNL+  +L  NQL   P +I  +  L+ L LG N L  +P+EI +L  L
Sbjct: 62  --TLPKEIKQLKNLQTLDLYYNQLTTLPKEIEQLKNLQTLGLGYNRLTILPQEIGQLKNL 119

Query: 175 HVLS-----------------------LGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
             L                        LG N LT +P     +  L++L L  NQL +LP
Sbjct: 120 QTLDLSSNQLKTLSKEIVQLKNLQTLHLGNNQLTTLPKEIEQMQNLQSLGLGYNQLTALP 179

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             I  LK L+ L L NN+L TLP EI  L+     LKSL L NN+L+ LP EI  LK L 
Sbjct: 180 KEIGQLKNLQELNLWNNQLTTLPIEIGQLQS----LKSLDLGNNQLKILPKEIGQLKNLQ 235

Query: 272 ELSLRDNPLVIR 283
            L L +N L I 
Sbjct: 236 TLYLNNNQLAIE 247



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/157 (39%), Positives = 87/157 (55%), Gaps = 4/157 (2%)

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           +KNL+   L  NQ++  P +I  +  L+ L L +N L  + +EI +L  L  L LG + L
Sbjct: 1   MKNLQTLGLYYNQIKTIPKEIGQLKNLQTLDLSSNQLKTLSKEIVQLKNLQTLHLGYSQL 60

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T +P     L  L+ L L  NQL +LP  I  LK L++L L  N+L  LP EI  LK   
Sbjct: 61  TTLPKEIKQLKNLQTLDLYYNQLTTLPKEIEQLKNLQTLGLGYNRLTILPQEIGQLK--- 117

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             L++L L +N+L+TL  EI+ LK L  L L +N L 
Sbjct: 118 -NLQTLDLSSNQLKTLSKEIVQLKNLQTLHLGNNQLT 153


>gi|456891504|gb|EMG02215.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 402

 Score =  126 bits (316), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 90/226 (39%), Positives = 131/226 (57%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N+  L L  N L+  P++  +  NL+ LDL +N++T LP  I     L  L    N L 
Sbjct: 134 QNLRELHLSVNQLTTLPNDIGQLQNLQVLDLEHNQLTTLPNDIGKLQKLERLSLIENQL- 192

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            ++L K++  LK L+V +L+GNQL   P +I ++  L+ L+L  N L  +P +I +L  L
Sbjct: 193 -KTLSKEIGYLKELQVLDLNGNQLTTLPKEIGELKNLRELHLYKNQLKTLPNDIGELKNL 251

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL +G N L  +P   G+L  L+ L L  NQL++LP  I  L+ L  L LH N+L+TLP
Sbjct: 252 QVLHIGSNQLKTLPKEIGELQNLQELYLYTNQLKTLPKEIGELQNLTVLDLHINELKTLP 311

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L+ L+     L L NN+L+TLP EI  L+ L+ L LR+N L
Sbjct: 312 KEIGELQNLT----VLDLRNNELKTLPKEIGELQSLTVLDLRNNEL 353



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 91/227 (40%), Positives = 124/227 (54%), Gaps = 7/227 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN-NLL 113
           P ++  L L +  L+  P    +  NLR L+L  N++T LP  I       L+  + N  
Sbjct: 41  PTDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGKLQNLQLLNLDKNQF 100

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA  LP D+  LKNL+  +LS NQL  FP  I  +  L+ L+L  N L  +P +I +L  
Sbjct: 101 TA--LPNDIGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTLPNDIGQLQN 158

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L VL L  N LT +P+  G L +LE L L +NQL++L   I  LK L+ L L+ N+L TL
Sbjct: 159 LQVLDLEHNQLTTLPNDIGKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLTTL 218

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P EI  LK L E    L L+ N+L+TLP +I  LK L  L +  N L
Sbjct: 219 PKEIGELKNLRE----LHLYKNQLKTLPNDIGELKNLQVLHIGSNQL 261



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 111/205 (54%), Gaps = 5/205 (2%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           Q+  LPN+    K + ++ L L  N L            L+ LDL+ N++T LP+ I   
Sbjct: 168 QLTTLPNDI--GKLQKLERLSLIENQLKTLSKEIGYLKELQVLDLNGNQLTTLPKEIGEL 225

Query: 102 P-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
             L  L    N L  ++LP D+  LKNL+V ++  NQL+  P +I ++  L+ LYL  N 
Sbjct: 226 KNLRELHLYKNQL--KTLPNDIGELKNLQVLHIGSNQLKTLPKEIGELQNLQELYLYTNQ 283

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P+EI +L  L VL L  N L  +P   G+L  L  L L +N+L++LP  I  L+ L
Sbjct: 284 LKTLPKEIGELQNLTVLDLHINELKTLPKEIGELQNLTVLDLRNNELKTLPKEIGELQSL 343

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSE 245
             L L NN+L+TLP EI  LK L +
Sbjct: 344 TVLDLRNNELKTLPNEIGKLKELRK 368



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 84/163 (51%), Gaps = 5/163 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLTAESLPK 120
           L  N L+  P    +  NLR L L  N++  LP  I     L  L I  N L   ++LPK
Sbjct: 210 LNGNQLTTLPKEIGELKNLRELHLYKNQLKTLPNDIGELKNLQVLHIGSNQL---KTLPK 266

Query: 121 DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
           ++  L+NL+   L  NQL+  P +I ++  L  L L  N L  +P+EI +L  L VL L 
Sbjct: 267 EIGELQNLQELYLYTNQLKTLPKEIGELQNLTVLDLHINELKTLPKEIGELQNLTVLDLR 326

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL 223
            N L  +P   G+L  L  L L +N+L++LP  I  LK L+ L
Sbjct: 327 NNELKTLPKEIGELQSLTVLDLRNNELKTLPNEIGKLKELRKL 369



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 93/167 (55%), Gaps = 4/167 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +L + + N  ++++ +LS  +L   P +I ++  L+ L L  N L  +P EI KL  
Sbjct: 30  TYHNLTEALQNPTDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGKLQN 89

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L+L  N  T +P+  G L  L+ L LS NQL + P  I  L+ L+ L L  N+L TL
Sbjct: 90  LQLLNLDKNQFTALPNDIGKLKNLQELHLSFNQLTTFPNDIGQLQNLRELHLSVNQLTTL 149

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P +I  L    + L+ L L +N+L TLP +I  L+ L  LSL +N L
Sbjct: 150 PNDIGQL----QNLQVLDLEHNQLTTLPNDIGKLQKLERLSLIENQL 192


>gi|418701717|ref|ZP_13262639.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759281|gb|EKR25496.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 379

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/216 (42%), Positives = 123/216 (56%), Gaps = 10/216 (4%)

Query: 71  FPDNASKFTN---LRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           + D A    N   +R+LDLS NR   LP+ I     L  L    N LT   LPK++  LK
Sbjct: 37  YTDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTI--LPKEIGQLK 94

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL+  NLS NQ++  P +I  +  L++LYL  N L  +P+EI +L KL  L L  N LT 
Sbjct: 95  NLRKLNLSANQIKTIPKEIEKLQKLQWLYLPKNQLTTLPQEIGQLQKLQWLYLPKNQLTT 154

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P   G L  L++L LS NQ++++P  I  L+ L+SL L NN+L TLP EI  L    + 
Sbjct: 155 LPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQL----QN 210

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           L+SL L  N+L TLP EI  L+ L +L L  N L I
Sbjct: 211 LQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTI 246



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 100/282 (35%), Positives = 145/282 (51%), Gaps = 26/282 (9%)

Query: 10  SSDSSDSDSFKTVS--------IKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTL 61
            ++ S+S ++  ++        ++TLD S +    +TL  +I          K +N+  L
Sbjct: 28  QAEESESGTYTDLAKALQNPLKVRTLDLSANRF--KTLPKEI---------GKLKNLQEL 76

Query: 62  LLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPK 120
            L  N L+  P    +  NLR L+LS N+I  +P+ I     L  L    N LT  +LP+
Sbjct: 77  NLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQWLYLPKNQLT--TLPQ 134

Query: 121 DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
           ++  L+ L+   L  NQL   P +I  +  LK L L  N +  +P+EI KL KL  L L 
Sbjct: 135 EIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLD 194

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
            N LT +P   G L  L++L LS N+L +LP  I +L+ L+ L L +N+L  LP EI  L
Sbjct: 195 NNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQL 254

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           K     L++L L NN+L TL  EI  L+ L  L LR N L I
Sbjct: 255 K----NLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTI 292



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 95/244 (38%), Positives = 129/244 (52%), Gaps = 13/244 (5%)

Query: 46  LPNNDYNKKPENIDTL----LLY--HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           LP N     P+ I  L     LY   N L+  P    +  NL+SL+LS N+I  +P+ I 
Sbjct: 124 LPKNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIE 183

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L +L   NN LT  +LP+++  L+NL+  +LS N+L   P +I  +  L+ LYL +
Sbjct: 184 KLQKLQSLGLDNNQLT--TLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVS 241

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P EI +L  L  L+L  N LT +      L  L++L L  NQL   P  I  LK
Sbjct: 242 NQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLK 301

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+ L L +N+L TLP  I  L    + LK L L+NN+L TLP EI  LK L EL L +N
Sbjct: 302 NLQVLDLGSNQLTTLPEGIGQL----QNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNN 357

Query: 279 PLVI 282
              I
Sbjct: 358 QFSI 361



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/142 (35%), Positives = 77/142 (54%), Gaps = 9/142 (6%)

Query: 39  LATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI 98
           ++ Q+ +LPN     K  N+ TL L +N L+       +  NL+SLDL +N++T  P+ I
Sbjct: 240 VSNQLTILPNEIGQLK--NLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEI 297

Query: 99  TNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
                L  L   +N LT  +LP+ +  L+NLKV  L+ NQL   P +I  +  L+ LYL 
Sbjct: 298 GQLKNLQVLDLGSNQLT--TLPEGIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLN 355

Query: 158 NNSLNHVPRE-INKL---CKLH 175
           NN  +   +E I KL   C+++
Sbjct: 356 NNQFSIEEKERIRKLLPKCQIY 377



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 56/110 (50%), Gaps = 4/110 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++        + TD+     +  ++  L LS N+ ++LP  I  LK L+ L L+ N+L 
Sbjct: 25  CEIQAEESESGTYTDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLT 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            LP EI  LK     L+ L L  N+++T+P EI  L+ L  L L  N L 
Sbjct: 85  ILPKEIGQLK----NLRKLNLSANQIKTIPKEIEKLQKLQWLYLPKNQLT 130


>gi|73669795|ref|YP_305810.1| leucine-rich repeat-containing protein [Methanosarcina barkeri str.
           Fusaro]
 gi|72396957|gb|AAZ71230.1| leucine-rich-repeat protein [Methanosarcina barkeri str. Fusaro]
          Length = 863

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/245 (38%), Positives = 134/245 (54%), Gaps = 15/245 (6%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N   L + +N L+  P   S+  NL+ LD+S N++T LP  I+    L+ L  RNN LT
Sbjct: 39  KNFTKLYISYNQLTSLPPEISELKNLKQLDISYNQLTSLPPDISKLKNLTQLNIRNNQLT 98

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLP  +S LKNLK  ++S NQL   P  I ++  L  L +  N L  +P EI+KL  L
Sbjct: 99  --SLPPGISKLKNLKQLDISENQLTSLPSGITELKDLTQLSISKNQLTSLPPEISKLKNL 156

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             LS+  N LT +P    +L  L  + + +NQL SLP  IS LK L  L +  N+L +LP
Sbjct: 157 KQLSISRNQLTSLPPEILELKSLTQINIYENQLTSLPHEISELKSLTQLSISGNQLTSLP 216

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPS 294
           +EI  L+ L++    L +  N+L +LP EI  LK L++L +  N L        T  PP 
Sbjct: 217 SEIANLESLTQ----LDISRNQLTSLPLEITELKNLTQLDISSNKL--------TSLPPE 264

Query: 295 LLELA 299
           +L+L 
Sbjct: 265 ILKLG 269



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 112/341 (32%), Positives = 166/341 (48%), Gaps = 34/341 (9%)

Query: 24  IKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRS 83
           +K LD SY+ L S         LP +    K +N+  L + +N L+  P   SK  NL+ 
Sbjct: 64  LKQLDISYNQLTS---------LPPDI--SKLKNLTQLNIRNNQLTSLPPGISKLKNLKQ 112

Query: 84  LDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
           LD+S N++T LP  IT    L+ L    N LT  SLP ++S LKNLK  ++S NQL   P
Sbjct: 113 LDISENQLTSLPSGITELKDLTQLSISKNQLT--SLPPEISKLKNLKQLSISRNQLTSLP 170

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
            +IL++ +L  + +  N L  +P EI++L  L  LS+ GN LT +P    +L  L  L +
Sbjct: 171 PEILELKSLTQINIYENQLTSLPHEISELKSLTQLSISGNQLTSLPSEIANLESLTQLDI 230

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE-----KLKSLLLHNNKL 257
           S NQL SLP  I+ LK L  L + +NKL +LP EI+ L    E       K + L  N L
Sbjct: 231 SRNQLTSLPLEITELKNLTQLDISSNKLTSLPPEILKLGIDIEWGNNSAEKGIFLEGNPL 290

Query: 258 RTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQ 317
              P EI+          +    VI +   +  +   L E+  + L V + +  +  L +
Sbjct: 291 EKPPIEIVK---------QGREAVINYFKSLEGEKKPLNEV--KVLLVGDGEAGKTSLLK 339

Query: 318 NLV--QYLESAHHCVNPKCKGVFFDNRIEHIK--FVDFCGK 354
            L+   +  + H       K   F ++ + IK  F DF G+
Sbjct: 340 RLLGEGFDGNEHQTQGINIKKWGFKDKDKEIKVNFWDFGGQ 380



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/225 (37%), Positives = 117/225 (52%), Gaps = 7/225 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           +  L L + NL+  P   S+  N   L +S N++T LP  I+    L  L    N LT  
Sbjct: 18  VTALRLSYKNLTSLPPEISELKNFTKLYISYNQLTSLPPEISELKNLKQLDISYNQLT-- 75

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           SLP D+S LKNL   N+  NQL   P  I  +  LK L +  N L  +P  I +L  L  
Sbjct: 76  SLPPDISKLKNLTQLNIRNNQLTSLPPGISKLKNLKQLDISENQLTSLPSGITELKDLTQ 135

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           LS+  N LT +P     L  L+ L +S NQL SLP  I  LK L  + ++ N+L +LP E
Sbjct: 136 LSISKNQLTSLPPEISKLKNLKQLSISRNQLTSLPPEILELKSLTQINIYENQLTSLPHE 195

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I  LK L++    L +  N+L +LP+EI  L+ L++L +  N L 
Sbjct: 196 ISELKSLTQ----LSISGNQLTSLPSEIANLESLTQLDISRNQLT 236


>gi|410451688|ref|ZP_11305690.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014454|gb|EKO76584.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 511

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/233 (39%), Positives = 131/233 (56%), Gaps = 7/233 (3%)

Query: 49  NDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLI 107
           N+  K P ++  L L +N L+ FP       NL+ L L+NN++  LP+ I     L  L 
Sbjct: 31  NEALKNPMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLY 90

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE 167
              N L  ++LPK++  L+NL+V +L  NQL   P +I  + +LK L+L +N L  +P+E
Sbjct: 91  LSENQL--KTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLKRLHLEHNQLITLPQE 148

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           I  L  L  L+L  N L  +P   G L  L+ L + +NQL +LP  I  L+ L+SL L N
Sbjct: 149 IGTLQDLEELNLANNQLRILPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLQSLNLEN 208

Query: 228 NKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           N+L TLP EI  L    +KL+ L L NN+L TLP EI  L+ L  L L +N L
Sbjct: 209 NRLVTLPKEIGAL----QKLEWLYLTNNQLATLPKEIGKLQKLEWLGLTNNQL 257



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/239 (38%), Positives = 123/239 (51%), Gaps = 22/239 (9%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L HN L   P       +L  L+L+NN++  LP+ I     L  L   NN L   +LP++
Sbjct: 137 LEHNQLITLPQEIGTLQDLEELNLANNQLRILPKEIGTLQHLQDLNVFNNQLI--TLPQE 194

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L+NL+  NL  N+L   P +I  +  L++LYL NN L  +P+EI KL KL  L L  
Sbjct: 195 IGTLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQLATLPKEIGKLQKLEWLGLTN 254

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P   G L  L+ LIL +N+LES P  I  L  L+ L L  N+  TLP EI TL 
Sbjct: 255 NQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLPNLQRLHLEYNRFTTLPQEIGTLH 314

Query: 242 CLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L                    E+L+ L L+NN+L TLP EI TL+ L  L L +N L 
Sbjct: 315 RLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLA 373



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 91/230 (39%), Positives = 125/230 (54%), Gaps = 7/230 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI-TNFPLSTLIARNNL 112
           K +N+  L+L +N L  FP       NL+ L L  NR T LPQ I T   L  L   +N 
Sbjct: 266 KLQNLKELILENNRLESFPKEIGTLPNLQRLHLEYNRFTTLPQEIGTLHRLPWLNLEHNQ 325

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP+++  L+ L+  NL  N+L   P +I  +  L++LYL NN L  +P+EI +L 
Sbjct: 326 LT--TLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLATLPKEIGQLQ 383

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N L  +P+  G L +LE L L +NQL +LP  I  L+ +  L L NN+LRT
Sbjct: 384 NLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNNQLTTLPEEIGTLQKIVKLNLANNQLRT 443

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           LP  I  L+     LK L L  N   T P EI+ LK L  L L++ P ++
Sbjct: 444 LPQGIGQLQS----LKDLDLSGNPFTTFPKEIVGLKHLQMLKLKNIPALL 489



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 91/227 (40%), Positives = 120/227 (52%), Gaps = 7/227 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K + ++ L L +N L   P    K  NL+ L L NNR+   P+ I   P L  L    N 
Sbjct: 243 KLQKLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLPNLQRLHLEYNR 302

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
            T  +LP+++  L  L   NL  NQL   P +I  +  L++L L NN L  +P+EI  L 
Sbjct: 303 FT--TLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQ 360

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  L L  N L  +P   G L  L+ L L  NQL +LP +I  L+ L+ L L NN+L T
Sbjct: 361 KLQHLYLANNQLATLPKEIGQLQNLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNNQLTT 420

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           LP EI TL    +K+  L L NN+LRTLP  I  L+ L +L L  NP
Sbjct: 421 LPEEIGTL----QKIVKLNLANNQLRTLPQGIGQLQSLKDLDLSGNP 463



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 112/302 (37%), Positives = 154/302 (50%), Gaps = 42/302 (13%)

Query: 16  SDSFKTVSIKTLDFSYSSL-----DSETLATQIEL-LPNNDYNKKPENIDTLL------L 63
           S+  K  S+K L   ++ L     +  TL    EL L NN     P+ I TL       +
Sbjct: 124 SEIGKLRSLKRLHLEHNQLITLPQEIGTLQDLEELNLANNQLRILPKEIGTLQHLQDLNV 183

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI-----------TNFPLSTL---IAR 109
           ++N L   P       NL+SL+L NNR+  LP+ I           TN  L+TL   I +
Sbjct: 184 FNNQLITLPQEIGTLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQLATLPKEIGK 243

Query: 110 ----------NNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                     NN L  +SLP+++  L+NLK   L  N+LE FP +I  +P L+ L+L  N
Sbjct: 244 LQKLEWLGLTNNQL--KSLPQEIGKLQNLKELILENNRLESFPKEIGTLPNLQRLHLEYN 301

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
               +P+EI  L +L  L+L  N LT +P   G L +LE L L +N+L +LP  I  L+ 
Sbjct: 302 RFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQK 361

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L+ L L NN+L TLP EI  L    + LK L L  N+L TLP  I TL+ L  LSL++N 
Sbjct: 362 LQHLYLANNQLATLPKEIGQL----QNLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNNQ 417

Query: 280 LV 281
           L 
Sbjct: 418 LT 419



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 76/172 (44%), Positives = 101/172 (58%), Gaps = 6/172 (3%)

Query: 110 NNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREIN 169
           NN LT    P+++  L+NLK  +L+ NQL+  P +I  +  LK+LYL  N L  +P+EI 
Sbjct: 47  NNQLTI--FPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLKTLPKEIG 104

Query: 170 KLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
            L  L VL L  N L  +P   G L  L+ L L  NQL +LP  I  L+ L+ L L NN+
Sbjct: 105 TLQNLEVLDLYKNQLRTLPSEIGKLRSLKRLHLEHNQLITLPQEIGTLQDLEELNLANNQ 164

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LR LP EI TL    + L+ L + NN+L TLP EI TL+ L  L+L +N LV
Sbjct: 165 LRILPKEIGTL----QHLQDLNVFNNQLITLPQEIGTLQNLQSLNLENNRLV 212



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/163 (45%), Positives = 94/163 (57%), Gaps = 10/163 (6%)

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P D+ NL      +L  NQL  FP +I  +  LKYL L NN L  +P+EI  L KL  L 
Sbjct: 37  PMDVRNL------DLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLY 90

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           L  N L  +P   G L  LE L L  NQL +LP+ I  L+ LK L L +N+L TLP EI 
Sbjct: 91  LSENQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLKRLHLEHNQLITLPQEIG 150

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           TL+ L E    L L NN+LR LP EI TL+ L +L++ +N L+
Sbjct: 151 TLQDLEE----LNLANNQLRILPKEIGTLQHLQDLNVFNNQLI 189



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 61/132 (46%), Positives = 80/132 (60%), Gaps = 4/132 (3%)

Query: 151 LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           ++ L L NN L   PREI  L  L  LSL  N L  +P     L +L+ L LS+NQL++L
Sbjct: 40  VRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLKTL 99

Query: 211 PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
           P  I  L+ L+ L L+ N+LRTLP+EI  L+ L    K L L +N+L TLP EI TL+ L
Sbjct: 100 PKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSL----KRLHLEHNQLITLPQEIGTLQDL 155

Query: 271 SELSLRDNPLVI 282
            EL+L +N L I
Sbjct: 156 EELNLANNQLRI 167


>gi|113477255|ref|YP_723316.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
 gi|110168303|gb|ABG52843.1| small GTP-binding protein [Trichodesmium erythraeum IMS101]
          Length = 1041

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 94/230 (40%), Positives = 125/230 (54%), Gaps = 7/230 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N+ +L L  N L+  P++ +K +NL  L L +N++T LP++IT    L+ L   +N 
Sbjct: 139 KLSNLTSLDLGGNQLTSLPESITKLSNLTELYLGHNQLTSLPESITKLSNLTELYLGHNQ 198

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  SLP+ ++ L NL   +LS N+L   P  I  +  L  LYLG+N L  +P  I  L 
Sbjct: 199 LT--SLPESITKLSNLTSLDLSWNKLTSLPESITKLSNLTSLYLGSNQLTSLPESITTLS 256

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L VL LG N LT +P++   L  L  L L  NQL  LP SI+ L  L  L L NN+L  
Sbjct: 257 NLTVLDLGSNQLTSMPESITKLSNLTELYLDGNQLTRLPESITKLSNLTKLDLRNNQLTR 316

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           LP  I  L  L++    L L  NKL +LP  I  L  L+ L LRDN L I
Sbjct: 317 LPESITKLSNLTK----LNLSWNKLTSLPESIGKLSNLTSLYLRDNQLTI 362



 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 93/229 (40%), Positives = 127/229 (55%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N+ +L L +N L+  P++ +K +NL  L L  N++T LP++IT    L+ L    N 
Sbjct: 70  KLSNLTSLYLVNNKLTSLPESITKLSNLTELYLDGNQLTSLPESITKLSNLTELYLSVNK 129

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  SLP+ +  L NL   +L GNQL   P  I  +  L  LYLG+N L  +P  I KL 
Sbjct: 130 LT--SLPESIGKLSNLTSLDLGGNQLTSLPESITKLSNLTELYLGHNQLTSLPESITKLS 187

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L LG N LT +P++   L  L +L LS N+L SLP SI+ L  L SL L +N+L +
Sbjct: 188 NLTELYLGHNQLTSLPESITKLSNLTSLDLSWNKLTSLPESITKLSNLTSLYLGSNQLTS 247

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP  I TL  L+     L L +N+L ++P  I  L  L+EL L  N L 
Sbjct: 248 LPESITTLSNLT----VLDLGSNQLTSMPESITKLSNLTELYLDGNQLT 292



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/221 (42%), Positives = 121/221 (54%), Gaps = 8/221 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N+  L L HN L+  P++ +K +NL SLDLS N++T LP++IT    L++L   +N 
Sbjct: 185 KLSNLTELYLGHNQLTSLPESITKLSNLTSLDLSWNKLTSLPESITKLSNLTSLYLGSNQ 244

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  SLP+ ++ L NL V +L  NQL   P  I  +  L  LYL  N L  +P  I KL 
Sbjct: 245 LT--SLPESITTLSNLTVLDLGSNQLTSMPESITKLSNLTELYLDGNQLTRLPESITKLS 302

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N LT +P++   L  L  L LS N+L SLP SI  L  L SL L +N+L  
Sbjct: 303 NLTKLDLRNNQLTRLPESITKLSNLTKLNLSWNKLTSLPESIGKLSNLTSLYLRDNQLTI 362

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           LP  I TL  L      L L+NN L   P EI T K + E+
Sbjct: 363 LPESITTLSNLG----WLYLNNNPLENPPIEIAT-KGIQEI 398



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 96/251 (38%), Positives = 125/251 (49%), Gaps = 7/251 (2%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K + +  L L    L+  P +  +   L  LDL +N +T LP++I     L++L   NN 
Sbjct: 24  KYQKLKWLYLSGCKLTEVPGDVWELEQLEVLDLGSNELTSLPESIGKLSNLTSLYLVNNK 83

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  SLP+ ++ L NL    L GNQL   P  I  +  L  LYL  N L  +P  I KL 
Sbjct: 84  LT--SLPESITKLSNLTELYLDGNQLTSLPESITKLSNLTELYLSVNKLTSLPESIGKLS 141

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L LGGN LT +P++   L  L  L L  NQL SLP SI+ L  L  L L +N+L +
Sbjct: 142 NLTSLDLGGNQLTSLPESITKLSNLTELYLGHNQLTSLPESITKLSNLTELYLGHNQLTS 201

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKP 292
           LP  I  L  L+    SL L  NKL +LP  I  L  L+ L L  N L     S  T   
Sbjct: 202 LPESITKLSNLT----SLDLSWNKLTSLPESITKLSNLTSLYLGSNQLTSLPESITTLSN 257

Query: 293 PSLLELASRTL 303
            ++L+L S  L
Sbjct: 258 LTVLDLGSNQL 268



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/139 (41%), Positives = 75/139 (53%), Gaps = 4/139 (2%)

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
           IQ      LK+LYL    L  VP ++ +L +L VL LG N LT +P++ G L  L +L L
Sbjct: 20  IQEAKYQKLKWLYLSGCKLTEVPGDVWELEQLEVLDLGSNELTSLPESIGKLSNLTSLYL 79

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
            +N+L SLP SI+ L  L  L L  N+L +LP  I  L  L+E    L L  NKL +LP 
Sbjct: 80  VNNKLTSLPESITKLSNLTELYLDGNQLTSLPESITKLSNLTE----LYLSVNKLTSLPE 135

Query: 263 EIITLKCLSELSLRDNPLV 281
            I  L  L+ L L  N L 
Sbjct: 136 SIGKLSNLTSLDLGGNQLT 154


>gi|456875008|gb|EMF90242.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 557

 Score =  125 bits (315), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/262 (37%), Positives = 132/262 (50%), Gaps = 28/262 (10%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN     P+ I TL       +++N L   P       NL+ L L+ N++T LP+ I 
Sbjct: 160 LANNQLRTLPKEIGTLQHLQDLNVFNNQLITLPQEIGTLQNLKYLRLAYNQLTTLPEEIG 219

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L  L   NN L   +LP+++  L+NL+  NL  N+L   P +I  +  L++LYL N
Sbjct: 220 RLENLQDLNVFNNQLV--TLPQEIGTLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTN 277

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P+EI KL +L  L L  N L  +P   G L  L+ LIL +N+LES P  I  L 
Sbjct: 278 NQLATLPQEIGKLQRLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLP 337

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRT 259
            L+ L L  N+  TLP EI TL  L                    E+L+ L L+NN+L T
Sbjct: 338 NLQRLHLEYNRFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLAT 397

Query: 260 LPTEIITLKCLSELSLRDNPLV 281
           LP EI TL+ L  L L +N L 
Sbjct: 398 LPKEIGTLQKLQHLYLANNQLA 419



 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 91/227 (40%), Positives = 120/227 (52%), Gaps = 7/227 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K + ++ L L +N L   P    K  NL+ L L NNR+   P+ I   P L  L    N 
Sbjct: 289 KLQRLEWLGLTNNQLKSLPQEIGKLQNLKELILENNRLESFPKEIGTLPNLQRLHLEYNR 348

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
            T  +LP+++  L  L   NL  NQL   P +I  +  L++L L NN L  +P+EI  L 
Sbjct: 349 FT--TLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQ 406

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  L L  N L  +P   G L  L+ L L  NQL +LP +I  L+ L+ L L NN+L T
Sbjct: 407 KLQHLYLANNQLATLPKEIGQLQNLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNNQLTT 466

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           LP EI TL    +K+  L L NN+LRTLP  I  L+ L +L L  NP
Sbjct: 467 LPEEIGTL----QKIVKLNLANNQLRTLPQGIGQLQSLKDLDLSGNP 509



 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 90/230 (39%), Positives = 124/230 (53%), Gaps = 7/230 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K +N+  L+L +N L  FP       NL+ L L  NR T LPQ I     L  L   +N 
Sbjct: 312 KLQNLKELILENNRLESFPKEIGTLPNLQRLHLEYNRFTTLPQEIGTLHRLPWLNLEHNQ 371

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP+++  L+ L+  NL  N+L   P +I  +  L++LYL NN L  +P+EI +L 
Sbjct: 372 LT--TLPQEIGRLERLEWLNLYNNRLATLPKEIGTLQKLQHLYLANNQLATLPKEIGQLQ 429

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N L  +P+  G L +LE L L +NQL +LP  I  L+ +  L L NN+LRT
Sbjct: 430 NLKDLDLEYNQLATLPEAIGTLQRLEWLSLKNNQLTTLPEEIGTLQKIVKLNLANNQLRT 489

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           LP  I  L+     LK L L  N   T P EI+ LK L  L L++ P ++
Sbjct: 490 LPQGIGQLQS----LKDLDLSGNPFTTFPKEIVGLKHLQILKLKNIPALL 535



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 98/250 (39%), Positives = 135/250 (54%), Gaps = 30/250 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI-----------TNFPLS 104
           EN+  L +++N L   P       NL+SL+L NNR+  LP+ I           TN  L+
Sbjct: 222 ENLQDLNVFNNQLVTLPQEIGTLQNLQSLNLENNRLVTLPKEIGALQKLEWLYLTNNQLA 281

Query: 105 TL---IAR----------NNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
           TL   I +          NN L  +SLP+++  L+NLK   L  N+LE FP +I  +P L
Sbjct: 282 TLPQEIGKLQRLEWLGLTNNQL--KSLPQEIGKLQNLKELILENNRLESFPKEIGTLPNL 339

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           + L+L  N    +P+EI  L +L  L+L  N LT +P   G L +LE L L +N+L +LP
Sbjct: 340 QRLHLEYNRFTTLPQEIGTLHRLPWLNLEHNQLTTLPQEIGRLERLEWLNLYNNRLATLP 399

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             I  L+ L+ L L NN+L TLP EI  L    + LK L L  N+L TLP  I TL+ L 
Sbjct: 400 KEIGTLQKLQHLYLANNQLATLPKEIGQL----QNLKDLDLEYNQLATLPEAIGTLQRLE 455

Query: 272 ELSLRDNPLV 281
            LSL++N L 
Sbjct: 456 WLSLKNNQLT 465



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 81/172 (47%), Positives = 104/172 (60%), Gaps = 6/172 (3%)

Query: 110 NNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREIN 169
           NN LT    P+++  L+NLK  +L+ NQL+  P +I  +  LK+LYL  N L  +P+EI 
Sbjct: 47  NNQLTI--FPREIGTLQNLKYLSLANNQLKTLPKEIETLQKLKWLYLSENQLATLPKEIG 104

Query: 170 KLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           KL +L  L LGGN LT IP   G L  LE L L +NQL +LP  I  L+ L+ L L NN+
Sbjct: 105 KLQRLERLYLGGNQLTTIPQEIGALQDLEELSLYNNQLITLPQEIGTLQDLEELNLANNQ 164

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LRTLP EI TL    + L+ L + NN+L TLP EI TL+ L  L L  N L 
Sbjct: 165 LRTLPKEIGTL----QHLQDLNVFNNQLITLPQEIGTLQNLKYLRLAYNQLT 212



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 91/252 (36%), Positives = 125/252 (49%), Gaps = 43/252 (17%)

Query: 49  NDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIA 108
           N+  K P ++  L L +N L+ FP       NL+ L L+NN++                 
Sbjct: 31  NEALKNPMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQL----------------- 73

Query: 109 RNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREI 168
                  ++LPK++  L+ LK   LS NQL   P +I  +  L+ LYLG N L  +P+EI
Sbjct: 74  -------KTLPKEIETLQKLKWLYLSENQLATLPKEIGKLQRLERLYLGGNQLTTIPQEI 126

Query: 169 NKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
             L  L  LSL  N L  +P   G L  LE L L++NQL +LP  I  L+ L+ L + NN
Sbjct: 127 GALQDLEELSLYNNQLITLPQEIGTLQDLEELNLANNQLRTLPKEIGTLQHLQDLNVFNN 186

Query: 229 KLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKC 269
           +L TLP EI TL+ L                    E L+ L + NN+L TLP EI TL+ 
Sbjct: 187 QLITLPQEIGTLQNLKYLRLAYNQLTTLPEEIGRLENLQDLNVFNNQLVTLPQEIGTLQN 246

Query: 270 LSELSLRDNPLV 281
           L  L+L +N LV
Sbjct: 247 LQSLNLENNRLV 258



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 95/242 (39%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 46  LPNNDYNKKPENIDTL----LLY--HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN     P+ I+TL     LY   N L+  P    K   L  L L  N++T +PQ I 
Sbjct: 68  LANNQLKTLPKEIETLQKLKWLYLSENQLATLPKEIGKLQRLERLYLGGNQLTTIPQEIG 127

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L  L   NN L   +LP+++  L++L+  NL+ NQL   P +I  +  L+ L + N
Sbjct: 128 ALQDLEELSLYNNQLI--TLPQEIGTLQDLEELNLANNQLRTLPKEIGTLQHLQDLNVFN 185

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P+EI  L  L  L L  N LT +P+  G L  L+ L + +NQL +LP  I  L+
Sbjct: 186 NQLITLPQEIGTLQNLKYLRLAYNQLTTLPEEIGRLENLQDLNVFNNQLVTLPQEIGTLQ 245

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+SL L NN+L TLP EI  L    +KL+ L L NN+L TLP EI  L+ L  L L +N
Sbjct: 246 NLQSLNLENNRLVTLPKEIGAL----QKLEWLYLTNNQLATLPQEIGKLQRLEWLGLTNN 301

Query: 279 PL 280
            L
Sbjct: 302 QL 303


>gi|418680694|ref|ZP_13241938.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327638|gb|EJO79883.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
          Length = 351

 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/203 (44%), Positives = 119/203 (58%), Gaps = 7/203 (3%)

Query: 81  LRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
           +R+LDLS NR   LP+ I     L  L    N LT   LPK++  LKNL+  NLS NQ++
Sbjct: 22  VRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTI--LPKEIGQLKNLRKLNLSANQIK 79

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
             P +I  +  L+ LYL NN L  +P+EI +L KL  L L  N LT +P   G L  L++
Sbjct: 80  TIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKS 139

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRT 259
           L LS NQ++++P  I  L+ L+SL L NN+L TLP EI  L    + L+SL L  N+L T
Sbjct: 140 LNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQL----QNLQSLDLSTNRLTT 195

Query: 260 LPTEIITLKCLSELSLRDNPLVI 282
           LP EI  L+ L +L L  N L I
Sbjct: 196 LPQEIGHLQNLQDLYLVSNQLTI 218



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 97/261 (37%), Positives = 138/261 (52%), Gaps = 18/261 (6%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           + ++TLD S +    +TL  +I          K +N+  L L  N L+  P    +  NL
Sbjct: 20  LKVRTLDLSANRF--KTLPKEI---------GKLKNLQELNLNKNQLTILPKEIGQLKNL 68

Query: 82  RSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           R L+LS N+I  +P+ I     L +L   NN LT  +LP+++  L+ L+   L  NQL  
Sbjct: 69  RKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLT--TLPQEIGQLQKLQWLYLPKNQLTT 126

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +I  +  LK L L  N +  +P++I KL KL  L L  N LT +P   G L  L++L
Sbjct: 127 LPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 186

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            LS N+L +LP  I +L+ L+ L L +N+L  LP EI  LK     L++L L NN+L TL
Sbjct: 187 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLK----NLQTLNLRNNRLTTL 242

Query: 261 PTEIITLKCLSELSLRDNPLV 281
             EI  L+ L  L LR N L 
Sbjct: 243 SKEIEQLQNLKSLDLRSNQLT 263



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/227 (41%), Positives = 121/227 (53%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N+  L L  N +   P    K   L+SL L NN++T LPQ I     L  L    N LT
Sbjct: 66  KNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLT 125

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+++  LKNLK  NLS NQ++  P +I  +  L+ L L NN L  +P+EI +L  L
Sbjct: 126 --TLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNL 183

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L+ L L  NQL  LP  I  LK L++L L NN+L TL 
Sbjct: 184 QSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLS 243

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L    + LKSL L +N+L T P EI  LK L  L L  N L 
Sbjct: 244 KEIEQL----QNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLT 286



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/242 (38%), Positives = 131/242 (54%), Gaps = 13/242 (5%)

Query: 46  LPNNDYNKKPENIDTL----LLY--HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           LPNN     P+ I  L     LY   N L+  P    +  NL+SL+LS N+I  +P+ I 
Sbjct: 96  LPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIE 155

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L +L   NN LT  +LP+++  L+NL+  +LS N+L   P +I  +  L+ LYL +
Sbjct: 156 KLQKLQSLGLDNNQLT--TLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVS 213

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P EI +L  L  L+L  N LT +      L  L++L L  NQL + P  I  LK
Sbjct: 214 NQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLK 273

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+ L L +N+L TLP  I  LK     L++L L +N+L TLP EI  L+ L EL L +N
Sbjct: 274 NLQVLDLGSNQLTTLPEGIGQLK----NLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNN 329

Query: 279 PL 280
            L
Sbjct: 330 QL 331



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/209 (38%), Positives = 116/209 (55%), Gaps = 14/209 (6%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           ++K+L+ SY+ +  +T+  +IE         K + + +L L +N L+  P    +  NL+
Sbjct: 136 NLKSLNLSYNQI--KTIPKKIE---------KLQKLQSLGLDNNQLTTLPQEIGQLQNLQ 184

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           SLDLS NR+T LPQ I +   L  L   +N LT   LP ++  LKNL+  NL  N+L   
Sbjct: 185 SLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTI--LPNEIGQLKNLQTLNLRNNRLTTL 242

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
             +I  +  LK L L +N L   P+EI +L  L VL LG N LT +P+  G L  L+ L 
Sbjct: 243 SKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLD 302

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  NQL +LP  I  L+ L+ L L+NN+L
Sbjct: 303 LDSNQLTTLPQEIGQLQNLQELFLNNNQL 331



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 94/187 (50%), Gaps = 19/187 (10%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T + L K + N   ++  +LS N+ +  P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 8   TYQDLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKN 67

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N +  IP     L +L++L L +NQL +LP  I  L+ L+ L L  N+L TL
Sbjct: 68  LRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTL 127

Query: 234 PTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           P EI  LK L                    +KL+SL L NN+L TLP EI  L+ L  L 
Sbjct: 128 PQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLD 187

Query: 275 LRDNPLV 281
           L  N L 
Sbjct: 188 LSTNRLT 194


>gi|421092130|ref|ZP_15552886.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
           200802841]
 gi|409999073|gb|EKO49773.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
           200802841]
          Length = 364

 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 95/248 (38%), Positives = 128/248 (51%), Gaps = 22/248 (8%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L  N L+  P    +  NLR L+L +N+ T LP+ +     L  L   +N 
Sbjct: 67  KLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKELSLGSNR 126

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP ++  LKNL+V  L+ NQ +  P +I  +  L+ L LGNN L  +P EI +L 
Sbjct: 127 LT--TLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQ 184

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L LG N LT +P+  G L +L+ L LS N+L +LP  I  L+ L+ L L +N+L  
Sbjct: 185 NLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTI 244

Query: 233 LPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           LP EI  LK L                    + LKSL L NN+L T P EI  LK L  L
Sbjct: 245 LPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVL 304

Query: 274 SLRDNPLV 281
            L  N L 
Sbjct: 305 DLGSNQLT 312



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 96/248 (38%), Positives = 128/248 (51%), Gaps = 22/248 (8%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           +K EN+  L L  N L+  P+   +  NLR L L++N+   +P+ I     L TL   NN
Sbjct: 112 EKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNN 171

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LTA  LP ++  L+NLK  +L  N+L   P +I  +  L+ LYL  N L  +P EI +L
Sbjct: 172 QLTA--LPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQL 229

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L LG N LT +P+  G L  L+ L L  N+L +L   I  L+ LKSL L NN+L 
Sbjct: 230 QNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLT 289

Query: 232 TLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSE 272
           T P EI  LK L                    + L+   L+NN+L TLP EI  L+ L E
Sbjct: 290 TFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNLQVFELNNNQLTTLPKEIGQLQNLQE 349

Query: 273 LSLRDNPL 280
           L L DN L
Sbjct: 350 LYLIDNQL 357



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/230 (37%), Positives = 122/230 (53%), Gaps = 7/230 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           + P ++  L L  N     P    K  NL+ L+L+ N++T LP+ I     L  L   +N
Sbjct: 43  QNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDN 102

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
             T   LPK++  L+NLK  +L  N+L   P +I  +  L+ L L +N    +P+EI +L
Sbjct: 103 QFTI--LPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQL 160

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L+LG N LT +P+  G L  L++L L  N+L +LP  I  L+ L+ L L  N+L 
Sbjct: 161 KNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLT 220

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           TLP EI  L+ L E    L L +N+L  LP EI  LK L  L LR N L 
Sbjct: 221 TLPNEIGQLQNLQE----LYLGSNQLTILPNEIGQLKNLQTLYLRSNRLT 266



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 62/155 (40%), Positives = 85/155 (54%), Gaps = 3/155 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           + +  L L  N L+  P+   +  NL+ L L +N++T LP  I     L TL  R+N LT
Sbjct: 207 QKLQDLYLSTNRLTTLPNEIGQLQNLQELYLGSNQLTILPNEIGQLKNLQTLYLRSNRLT 266

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +L KD+  L+NLK  +L  NQL  FP +I  +  L+ L LG+N L  +P+EI +L  L
Sbjct: 267 --TLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPKEIGQLKNL 324

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            V  L  N LT +P   G L  L+ L L DNQL S
Sbjct: 325 QVFELNNNQLTTLPKEIGQLQNLQELYLIDNQLSS 359



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/168 (37%), Positives = 89/168 (52%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLS N+ +  P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 34  TYRDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N  T +P     L  L+ L L  N+L +LP  I  LK L+ L L +N+ +T+
Sbjct: 94  LRKLNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTI 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  LK     L++L L NN+L  LP EI  L+ L  L L  N L 
Sbjct: 154 PKEIGQLK----NLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLT 197



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/129 (37%), Positives = 72/129 (55%), Gaps = 5/129 (3%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           + Q+ +LPN     K  N+ TL L  N L+    +  +  NL+SLDL NN++T  P+ I 
Sbjct: 239 SNQLTILPNEIGQLK--NLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIE 296

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L  L   +N LT  +LPK++  LKNL+VF L+ NQL   P +I  +  L+ LYL +
Sbjct: 297 QLKNLQVLDLGSNQLT--TLPKEIGQLKNLQVFELNNNQLTTLPKEIGQLQNLQELYLID 354

Query: 159 NSLNHVPRE 167
           N L+   +E
Sbjct: 355 NQLSSEEKE 363


>gi|456823237|gb|EMF71707.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 391

 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 90/203 (44%), Positives = 119/203 (58%), Gaps = 7/203 (3%)

Query: 81  LRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
           +R+LDLS NR   LP+ I     L  L    N LT   LPK++  LKNL+  NLS NQ++
Sbjct: 50  VRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTI--LPKEIGQLKNLRKLNLSANQIK 107

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
             P +I  +  L+ LYL NN L  +P+EI +L KL  L L  N LT +P   G L  L++
Sbjct: 108 TIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKS 167

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRT 259
           L LS NQ++++P  I  L+ L+SL L NN+L TLP EI  L    + L+SL L  N+L T
Sbjct: 168 LNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQL----QNLQSLDLSTNRLTT 223

Query: 260 LPTEIITLKCLSELSLRDNPLVI 282
           LP EI  L+ L +L L  N L I
Sbjct: 224 LPQEIGHLQNLQDLYLVSNQLTI 246



 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 99/262 (37%), Positives = 139/262 (53%), Gaps = 18/262 (6%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           + ++TLD S +    +TL  +I          K +N+  L L  N L+  P    +  NL
Sbjct: 48  LKVRTLDLSANRF--KTLPKEI---------GKLKNLQELNLNKNQLTILPKEIGQLKNL 96

Query: 82  RSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           R L+LS N+I  +P+ I     L +L   NN LT  +LP+++  L+ L+   L  NQL  
Sbjct: 97  RKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLT--TLPQEIGQLQKLQWLYLPKNQLTT 154

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +I  +  LK L L  N +  +P+EI KL KL  L L  N LT +P   G L  L++L
Sbjct: 155 LPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 214

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            LS N+L +LP  I +L+ L+ L L +N+L  LP EI  LK     L++L L NN+L TL
Sbjct: 215 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLK----NLQTLNLRNNRLTTL 270

Query: 261 PTEIITLKCLSELSLRDNPLVI 282
             EI  L+ L  L LR N L I
Sbjct: 271 SKEIEQLQNLKSLDLRSNQLTI 292



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/227 (41%), Positives = 120/227 (52%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N+  L L  N +   P    K   L+SL L NN++T LPQ I     L  L    N LT
Sbjct: 94  KNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLT 153

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+++  LKNLK  NLS NQ++  P +I  +  L+ L L NN L  +P+EI +L  L
Sbjct: 154 --TLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNL 211

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L+ L L  NQL  LP  I  LK L++L L NN+L TL 
Sbjct: 212 QSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLS 271

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L    + LKSL L +N+L   P EI  LK L  L L  N L 
Sbjct: 272 KEIEQL----QNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLT 314



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/242 (38%), Positives = 130/242 (53%), Gaps = 13/242 (5%)

Query: 46  LPNNDYNKKPENIDTL----LLY--HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           LPNN     P+ I  L     LY   N L+  P    +  NL+SL+LS N+I  +P+ I 
Sbjct: 124 LPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIE 183

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L +L   NN LT  +LP+++  L+NL+  +LS N+L   P +I  +  L+ LYL +
Sbjct: 184 KLQKLQSLGLDNNQLT--TLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVS 241

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P EI +L  L  L+L  N LT +      L  L++L L  NQL   P  I  LK
Sbjct: 242 NQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLK 301

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+ L L +N+L TLP  I  LK     L++L L +N+L TLP EI  L+ L EL L +N
Sbjct: 302 NLQVLDLGSNQLTTLPEGIGQLK----NLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNN 357

Query: 279 PL 280
            L
Sbjct: 358 QL 359



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 80/209 (38%), Positives = 116/209 (55%), Gaps = 14/209 (6%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           ++K+L+ SY+ +  +T+  +IE         K + + +L L +N L+  P    +  NL+
Sbjct: 164 NLKSLNLSYNQI--KTIPKEIE---------KLQKLQSLGLDNNQLTTLPQEIGQLQNLQ 212

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           SLDLS NR+T LPQ I +   L  L   +N LT   LP ++  LKNL+  NL  N+L   
Sbjct: 213 SLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTI--LPNEIGQLKNLQTLNLRNNRLTTL 270

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
             +I  +  LK L L +N L   P+EI +L  L VL LG N LT +P+  G L  L+ L 
Sbjct: 271 SKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLD 330

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  NQL +LP  I  L+ L+ L L+NN+L
Sbjct: 331 LDSNQLTTLPQEIGQLQNLQELFLNNNQL 359



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/168 (37%), Positives = 91/168 (54%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N   ++  +LS N+ +  P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 36  TYTDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N +  IP     L +L++L L +NQL +LP  I  L+ L+ L L  N+L TL
Sbjct: 96  LRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  LK     LKSL L  N+++T+P EI  L+ L  L L +N L 
Sbjct: 156 PQEIGQLK----NLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLT 199



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 60/129 (46%), Gaps = 19/129 (14%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++        + TD+     +  ++  L LS N+ ++LP  I  LK L+ L L+ N+L 
Sbjct: 25  CEIQAEESESGTYTDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLT 84

Query: 232 TLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSE 272
            LP EI  LK L                    +KL+SL L NN+L TLP EI  L+ L  
Sbjct: 85  ILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQW 144

Query: 273 LSLRDNPLV 281
           L L  N L 
Sbjct: 145 LYLPKNQLT 153


>gi|418712108|ref|ZP_13272853.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791375|gb|EKR85051.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 380

 Score =  125 bits (314), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 99/262 (37%), Positives = 139/262 (53%), Gaps = 18/262 (6%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           + ++TLD S +    +TL  +I          K +N+  L L  N L+  P    +  NL
Sbjct: 49  LKVRTLDLSANRF--KTLPKEI---------GKLKNLQELNLNKNQLTILPKEIGQLKNL 97

Query: 82  RSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           R L+LS N+I  +P+ I     L +L   NN LT  +LP+++  L+ L+   L  NQL  
Sbjct: 98  RKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLT--TLPQEIGQLQKLQWLYLPKNQLTT 155

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +I  +  LK L L  N +  +P+EI KL KL  L L  N LT +P   G L  L++L
Sbjct: 156 LPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 215

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            LS N+L +LP  I +L+ L+ L L +N+L  LP EI  LK     L++L L NN+L TL
Sbjct: 216 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLK----NLQTLNLRNNRLTTL 271

Query: 261 PTEIITLKCLSELSLRDNPLVI 282
             EI  L+ L  L LR N L I
Sbjct: 272 SKEIEQLQNLKSLDLRSNQLTI 293



 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 94/227 (41%), Positives = 120/227 (52%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N+  L L  N +   P    K   L+SL L NN++T LPQ I     L  L    N LT
Sbjct: 95  KNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLT 154

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+++  LKNLK  NLS NQ++  P +I  +  L+ L L NN L  +P+EI +L  L
Sbjct: 155 --TLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNL 212

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L+ L L  NQL  LP  I  LK L++L L NN+L TL 
Sbjct: 213 QSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLS 272

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L    + LKSL L +N+L   P EI  LK L  L L  N L 
Sbjct: 273 KEIEQL----QNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLT 315



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 94/242 (38%), Positives = 130/242 (53%), Gaps = 13/242 (5%)

Query: 46  LPNNDYNKKPENIDTL----LLY--HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           LPNN     P+ I  L     LY   N L+  P    +  NL+SL+LS N+I  +P+ I 
Sbjct: 125 LPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIE 184

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L +L   NN LT  +LP+++  L+NL+  +LS N+L   P +I  +  L+ LYL +
Sbjct: 185 KLQKLQSLGLDNNQLT--TLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVS 242

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P EI +L  L  L+L  N LT +      L  L++L L  NQL   P  I  LK
Sbjct: 243 NQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLK 302

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+ L L +N+L TLP  I  LK     L++L L +N+L TLP EI  L+ L EL L +N
Sbjct: 303 NLQVLDLGSNQLTTLPEGIGQLK----NLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNN 358

Query: 279 PL 280
            L
Sbjct: 359 QL 360



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/209 (38%), Positives = 116/209 (55%), Gaps = 14/209 (6%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           ++K+L+ SY+ +  +T+  +IE         K + + +L L +N L+  P    +  NL+
Sbjct: 165 NLKSLNLSYNQI--KTIPKEIE---------KLQKLQSLGLDNNQLTTLPQEIGQLQNLQ 213

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           SLDLS NR+T LPQ I +   L  L   +N LT   LP ++  LKNL+  NL  N+L   
Sbjct: 214 SLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTI--LPNEIGQLKNLQTLNLRNNRLTTL 271

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
             +I  +  LK L L +N L   P+EI +L  L VL LG N LT +P+  G L  L+ L 
Sbjct: 272 SKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLD 331

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  NQL +LP  I  L+ L+ L L+NN+L
Sbjct: 332 LDSNQLTTLPQEIGQLQNLQELFLNNNQL 360



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/168 (37%), Positives = 91/168 (54%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N   ++  +LS N+ +  P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 37  TYTDLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKN 96

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N +  IP     L +L++L L +NQL +LP  I  L+ L+ L L  N+L TL
Sbjct: 97  LRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTL 156

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  LK     LKSL L  N+++T+P EI  L+ L  L L +N L 
Sbjct: 157 PQEIGQLK----NLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLT 200


>gi|418668210|ref|ZP_13229613.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756067|gb|EKR17694.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 379

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 93/216 (43%), Positives = 123/216 (56%), Gaps = 10/216 (4%)

Query: 71  FPDNASKFTN---LRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           + D A    N   +R+LDLS NR   LP+ I     L  L    N LT   LPK++  LK
Sbjct: 37  YTDLAKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTI--LPKEIGQLK 94

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL+  NLS NQ++  P +I  +  L+ LYL NN L  +P+EI +L KL  L L  N LT 
Sbjct: 95  NLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTT 154

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P   G L  L++L LS NQ++++P  I  L+ L+SL L NN+L TLP EI  L    + 
Sbjct: 155 LPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQL----QN 210

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           L+SL L  N+L TLP EI  L+ L +L L  N L I
Sbjct: 211 LQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTI 246



 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 102/284 (35%), Positives = 145/284 (51%), Gaps = 22/284 (7%)

Query: 3   YNYGSSSSSDSSDSDSFKTVS----IKTLDFSYSSLDSETLATQIELLPNNDYNKKPENI 58
           Y   +  S   + +D  K +     ++TLD S +    +TL  +I          K +N+
Sbjct: 25  YELQAEESESGTYTDLAKALQNPLKVRTLDLSANRF--KTLPKEI---------GKLKNL 73

Query: 59  DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAES 117
             L L  N L+  P    +  NLR L+LS N+I  +P+ I     L +L   NN LT  +
Sbjct: 74  QELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLT--T 131

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LP+++  L+ L+   L  NQL   P +I  +  LK L L  N +  +P+EI KL KL  L
Sbjct: 132 LPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSL 191

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            L  N LT +P   G L  L++L LS N+L +LP  I +L+ L+ L L +N+L  LP EI
Sbjct: 192 GLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEI 251

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             LK     L++L L NN+L TL  EI  L+ L  L LR N L 
Sbjct: 252 RQLK----NLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLT 291



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/242 (38%), Positives = 131/242 (54%), Gaps = 13/242 (5%)

Query: 46  LPNNDYNKKPENIDTL----LLY--HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           LPNN     P+ I  L     LY   N L+  P    +  NL+SL+LS N+I  +P+ I 
Sbjct: 124 LPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIE 183

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L +L   NN LT  +LP+++  L+NL+  +LS N+L   P +I  +  L+ LYL +
Sbjct: 184 KLQKLQSLGLDNNQLT--TLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVS 241

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P EI +L  L  L+L  N LT +      L  L++L L  NQL + P  I  LK
Sbjct: 242 NQLTILPNEIRQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKGIGQLK 301

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+ L L +N+L TLP  I  LK     L++L L +N+L TLP EI  L+ L EL L +N
Sbjct: 302 NLQVLDLGSNQLTTLPEGIGQLK----NLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNN 357

Query: 279 PL 280
            L
Sbjct: 358 QL 359



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/211 (34%), Positives = 105/211 (49%), Gaps = 37/211 (17%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           ++K+L+ SY+ +  +T+  +IE         K + + +L L +N L+  P    +  NL+
Sbjct: 164 NLKSLNLSYNQI--KTIPKEIE---------KLQKLQSLGLDNNQLTTLPQEIGQLQNLQ 212

Query: 83  SLDLSNNRITHLPQAITNFP------------------------LSTLIARNNLLTAESL 118
           SLDLS NR+T LPQ I +                          L TL  RNN LT  +L
Sbjct: 213 SLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIRQLKNLQTLNLRNNRLT--TL 270

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
            K++  L+NLK  +L  NQL  FP  I  +  L+ L LG+N L  +P  I +L  L  L 
Sbjct: 271 SKEIEQLQNLKSLDLRSNQLTTFPKGIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLD 330

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
           L  N LT +P   G L  L+ L L++NQL S
Sbjct: 331 LDSNQLTTLPQEIGQLQNLQELFLNNNQLSS 361


>gi|418755366|ref|ZP_13311573.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964377|gb|EKO32267.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 513

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/234 (41%), Positives = 126/234 (53%), Gaps = 7/234 (2%)

Query: 49  NDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLI 107
           N+  K P ++  L L  N L+  P+   K   L  L+LSNNR+T LP  I     L  L 
Sbjct: 31  NEALKNPMDVRILYLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEELD 90

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE 167
             +N LT  + P ++  L+ LK   L+ NQL   P +I  +  L++LYL NN L  +P E
Sbjct: 91  LFHNRLT--TFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNNHLATLPSE 148

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           I +L +L  L L  N L  +P   G L  LE L L DNQL +LP  I  L+ L+ L + N
Sbjct: 149 IGRLQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQEIGQLENLQDLDVSN 208

Query: 228 NKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           N L TLP EI  L+     LK L L NN L TLP EI  L+ L EL+L +N L+
Sbjct: 209 NHLTTLPNEIGKLRS----LKRLNLSNNLLITLPNEIGKLQNLEELNLSNNQLI 258



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 89/227 (39%), Positives = 123/227 (54%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           + +  L L +N+L+  P    +   L+ L L NN +  LP+ I     L  L   +N LT
Sbjct: 130 QKLQHLYLKNNHLATLPSEIGRLQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLEDNQLT 189

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+++  L+NL+  ++S N L   P +I  + +LK L L NN L  +P EI KL  L
Sbjct: 190 --TLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNEIGKLQNL 247

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N L  +P   G L +LE L L  NQL +LP  I  L+ L+ L L NN L TLP
Sbjct: 248 EELNLSNNQLITLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNNHLETLP 307

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L+     LK L L +N+L TLP EI TL+ L  L + +N LV
Sbjct: 308 NEIGKLRS----LKRLHLEHNQLITLPQEIGTLQNLPSLDVSNNHLV 350



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 100/270 (37%), Positives = 131/270 (48%), Gaps = 45/270 (16%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K +N++ L L  N L+  P    +  NL+ LD+SNN +T LP  I     L  L   NNL
Sbjct: 174 KLQNLEQLYLEDNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNL 233

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPI----------------QILDIPT------ 150
           L   +LP ++  L+NL+  NLS NQL   P                 Q++ +P       
Sbjct: 234 LI--TLPNEIGKLQNLEELNLSNNQLITLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQ 291

Query: 151 -LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            L+YLYL NN L  +P EI KL  L  L L  N L  +P   G L  L +L +S+N L +
Sbjct: 292 KLEYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPSLDVSNNHLVT 351

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSL 250
           LP  I  L  LK L L NN+L TLP EI  L+ L                    E L+ L
Sbjct: 352 LPNEIGKLLSLKRLNLENNQLTTLPKEIGKLQNLPNLNLSNNQLATLPNEIGQLENLQYL 411

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            L NN+L+TLP EI  L+ L  L+L +N L
Sbjct: 412 NLENNQLKTLPNEIGQLENLQYLNLENNQL 441



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/253 (35%), Positives = 127/253 (50%), Gaps = 30/253 (11%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K +N++ L L +N L   P    +   L  L L +N++  LPQ I     L  L  +NN 
Sbjct: 243 KLQNLEELNLSNNQLITLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQKLEYLYLKNNH 302

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L  E+LP ++  L++LK  +L  NQL   P +I  +  L  L + NN L  +P EI KL 
Sbjct: 303 L--ETLPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPSLDVSNNHLVTLPNEIGKLL 360

Query: 173 KLHVLSLGGNSLTDIP-----------------------DTFGDLYQLEALILSDNQLES 209
            L  L+L  N LT +P                       +  G L  L+ L L +NQL++
Sbjct: 361 SLKRLNLENNQLTTLPKEIGKLQNLPNLNLSNNQLATLPNEIGQLENLQYLNLENNQLKT 420

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           LP  I  L+ L+ L L NN+L+TLP EI  L    + LK L L  N+L TLP EI+ LK 
Sbjct: 421 LPNEIGQLENLQYLNLENNQLKTLPNEIGRL----QNLKVLNLGGNQLVTLPQEIVGLKH 476

Query: 270 LSELSLRDNPLVI 282
           L  L L++ P ++
Sbjct: 477 LQILKLKNIPALL 489



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 42/96 (43%), Positives = 54/96 (56%), Gaps = 4/96 (4%)

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           D  +   +   +  L LSDNQL +LP  I  L+ L+ L L NN+L TLP EI  L+ L E
Sbjct: 29  DFNEALKNPMDVRILYLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEE 88

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
               L L +N+L T P EI+ L+ L  L L DN LV
Sbjct: 89  ----LDLFHNRLTTFPNEIVRLQRLKWLYLADNQLV 120


>gi|417770611|ref|ZP_12418517.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|409947383|gb|EKN97381.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455665930|gb|EMF31412.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 377

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/203 (44%), Positives = 119/203 (58%), Gaps = 7/203 (3%)

Query: 81  LRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
           +R+LDLS NR   LP+ I     L  L    N LT   LPK++  LKNL+  NLS NQ++
Sbjct: 48  VRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTI--LPKEIGQLKNLRKLNLSANQIK 105

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
             P +I  +  L+ LYL NN L  +P+EI +L KL  L L  N LT +P   G L  L++
Sbjct: 106 TIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKS 165

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRT 259
           L LS NQ++++P  I  L+ L+SL L NN+L TLP EI  L    + L+SL L  N+L T
Sbjct: 166 LNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQL----QNLQSLDLSTNRLTT 221

Query: 260 LPTEIITLKCLSELSLRDNPLVI 282
           LP EI  L+ L +L L  N L I
Sbjct: 222 LPQEIGHLQNLQDLYLVSNQLTI 244



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 97/261 (37%), Positives = 138/261 (52%), Gaps = 18/261 (6%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           + ++TLD S +    +TL  +I          K +N+  L L  N L+  P    +  NL
Sbjct: 46  LKVRTLDLSANRF--KTLPKEI---------GKLKNLQELNLNKNQLTILPKEIGQLKNL 94

Query: 82  RSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           R L+LS N+I  +P+ I     L +L   NN LT  +LP+++  L+ L+   L  NQL  
Sbjct: 95  RKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLT--TLPQEIGQLQKLQWLYLPKNQLTT 152

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +I  +  LK L L  N +  +P++I KL KL  L L  N LT +P   G L  L++L
Sbjct: 153 LPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 212

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            LS N+L +LP  I +L+ L+ L L +N+L  LP EI  LK     L++L L NN+L TL
Sbjct: 213 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLK----NLQTLNLRNNRLTTL 268

Query: 261 PTEIITLKCLSELSLRDNPLV 281
             EI  L+ L  L LR N L 
Sbjct: 269 SKEIEQLQNLKSLDLRSNQLT 289



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 95/227 (41%), Positives = 121/227 (53%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N+  L L  N +   P    K   L+SL L NN++T LPQ I     L  L    N LT
Sbjct: 92  KNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLT 151

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+++  LKNLK  NLS NQ++  P +I  +  L+ L L NN L  +P+EI +L  L
Sbjct: 152 --TLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNL 209

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L+ L L  NQL  LP  I  LK L++L L NN+L TL 
Sbjct: 210 QSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLS 269

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L    + LKSL L +N+L T P EI  LK L  L L  N L 
Sbjct: 270 KEIEQL----QNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLT 312



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/242 (38%), Positives = 131/242 (54%), Gaps = 13/242 (5%)

Query: 46  LPNNDYNKKPENIDTL----LLY--HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           LPNN     P+ I  L     LY   N L+  P    +  NL+SL+LS N+I  +P+ I 
Sbjct: 122 LPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIE 181

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L +L   NN LT  +LP+++  L+NL+  +LS N+L   P +I  +  L+ LYL +
Sbjct: 182 KLQKLQSLGLDNNQLT--TLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVS 239

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P EI +L  L  L+L  N LT +      L  L++L L  NQL + P  I  LK
Sbjct: 240 NQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLK 299

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+ L L +N+L TLP  I  LK     L++L L +N+L TLP EI  L+ L EL L +N
Sbjct: 300 NLQVLDLGSNQLTTLPEGIGQLK----NLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNN 355

Query: 279 PL 280
            L
Sbjct: 356 QL 357



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/209 (38%), Positives = 116/209 (55%), Gaps = 14/209 (6%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           ++K+L+ SY+ +  +T+  +IE         K + + +L L +N L+  P    +  NL+
Sbjct: 162 NLKSLNLSYNQI--KTIPKKIE---------KLQKLQSLGLDNNQLTTLPQEIGQLQNLQ 210

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           SLDLS NR+T LPQ I +   L  L   +N LT   LP ++  LKNL+  NL  N+L   
Sbjct: 211 SLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTI--LPNEIGQLKNLQTLNLRNNRLTTL 268

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
             +I  +  LK L L +N L   P+EI +L  L VL LG N LT +P+  G L  L+ L 
Sbjct: 269 SKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLD 328

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  NQL +LP  I  L+ L+ L L+NN+L
Sbjct: 329 LDSNQLTTLPQEIGQLQNLQELFLNNNQL 357



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 94/187 (50%), Gaps = 19/187 (10%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T + L K + N   ++  +LS N+ +  P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 34  TYQDLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N +  IP     L +L++L L +NQL +LP  I  L+ L+ L L  N+L TL
Sbjct: 94  LRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTL 153

Query: 234 PTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           P EI  LK L                    +KL+SL L NN+L TLP EI  L+ L  L 
Sbjct: 154 PQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLD 213

Query: 275 LRDNPLV 281
           L  N L 
Sbjct: 214 LSTNRLT 220


>gi|418695383|ref|ZP_13256403.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|421108072|ref|ZP_15568616.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
 gi|409956837|gb|EKO15758.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|410006773|gb|EKO60510.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
          Length = 288

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 87/214 (40%), Positives = 117/214 (54%), Gaps = 5/214 (2%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSN 124
            N L   P       NL+ L LS N IT LP  I N     +++ N +   E++PK++ N
Sbjct: 59  ENPLKTLPKEIGNLKNLKELSLSTNEITTLPPEIGNLKNLQVLSLN-VNRLETIPKEIGN 117

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           LKNLK  ++  N+L+  P +I ++  LK LYL  N L  +P+EI  L KL  + L  N L
Sbjct: 118 LKNLKELSIEWNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQRIHLSTNEL 177

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T +P    +L  L  + L DNQ  +LP  I NLK L++L+L  N+L +LP EI  LK L 
Sbjct: 178 TKLPQEIKNLEGLIEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLPEEIGNLKNLK 237

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           E    L L  N+L  LP +I  LK LS LSL  N
Sbjct: 238 E----LYLEENQLTKLPKQIAALKQLSRLSLEGN 267



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/202 (39%), Positives = 112/202 (55%), Gaps = 7/202 (3%)

Query: 81  LRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
           LR  D   N +  LP+ I N   L  L    N +T  +LP ++ NLKNL+V +L+ N+LE
Sbjct: 52  LRYRDNEENPLKTLPKEIGNLKNLKELSLSTNEIT--TLPPEIGNLKNLQVLSLNVNRLE 109

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
             P +I ++  LK L +  N L  +P+EI  L  L  L L  N L  +P    +L +L+ 
Sbjct: 110 TIPKEIGNLKNLKELSIEWNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQR 169

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRT 259
           + LS N+L  LP  I NL+ L  + L++N+  TLP EI  LK     L++L+L  N+L +
Sbjct: 170 IHLSTNELTKLPQEIKNLEGLIEIYLYDNQFTTLPKEIGNLK----NLRNLVLGRNQLIS 225

Query: 260 LPTEIITLKCLSELSLRDNPLV 281
           LP EI  LK L EL L +N L 
Sbjct: 226 LPEEIGNLKNLKELYLEENQLT 247



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 94/177 (53%), Gaps = 5/177 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLL 113
           +N+  L L  N L   P       NL+ L +  N++  LP+ I N   L  L ++RN L 
Sbjct: 96  KNLQVLSLNVNRLETIPKEIGNLKNLKELSIEWNKLKTLPKEIGNLKNLKELYLSRNQL- 154

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
             + LP+++ NLK L+  +LS N+L + P +I ++  L  +YL +N    +P+EI  L  
Sbjct: 155 --KVLPQEIWNLKKLQRIHLSTNELTKLPQEIKNLEGLIEIYLYDNQFTTLPKEIGNLKN 212

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L LG N L  +P+  G+L  L+ L L +NQL  LP  I+ LK L  L L  N+ 
Sbjct: 213 LRNLVLGRNQLISLPEEIGNLKNLKELYLEENQLTKLPKQIAALKQLSRLSLEGNQF 269



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/101 (45%), Positives = 59/101 (58%), Gaps = 4/101 (3%)

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P   G+L  L+ L LS N++ +LP  I NLK L+ L L+ N+L T+P EI  LK
Sbjct: 60  NPLKTLPKEIGNLKNLKELSLSTNEITTLPPEIGNLKNLQVLSLNVNRLETIPKEIGNLK 119

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            L E    L +  NKL+TLP EI  LK L EL L  N L +
Sbjct: 120 NLKE----LSIEWNKLKTLPKEIGNLKNLKELYLSRNQLKV 156



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/122 (32%), Positives = 60/122 (49%), Gaps = 7/122 (5%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           Q+++LP   +N K   +  + L  N L+  P        L  + L +N+ T LP+ I N 
Sbjct: 153 QLKVLPQEIWNLK--KLQRIHLSTNELTKLPQEIKNLEGLIEIYLYDNQFTTLPKEIGNL 210

Query: 102 P--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
               + ++ RN L+   SLP+++ NLKNLK   L  NQL + P QI  +  L  L L  N
Sbjct: 211 KNLRNLVLGRNQLI---SLPEEIGNLKNLKELYLEENQLTKLPKQIAALKQLSRLSLEGN 267

Query: 160 SL 161
             
Sbjct: 268 QF 269


>gi|410451731|ref|ZP_11305733.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014497|gb|EKO76627.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 394

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/227 (39%), Positives = 130/227 (57%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +++  L L  N ++  P+   K  +L+ L+LS N++T +P+ I     L TL    N LT
Sbjct: 83  QHLQKLDLGFNKITVLPNEIGKLQSLQELNLSFNQLTTIPKEIWELQHLQTLHLVYNQLT 142

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+  +L  NQL   P +I ++  LK LYL +N+L  +P+E+ +L  L
Sbjct: 143 --TLPKEIGKLQNLQELHLWENQLTTIPQEIGNLQNLKELYLMHNNLTTLPKEVGQLQNL 200

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L  L L+ NQ  +LP  I NL+ L+ L L  N+L TLP
Sbjct: 201 QKLILDKNQLTTLPQEIGKLQNLRGLALTGNQFTTLPKEIGNLQNLQGLALTRNQLTTLP 260

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L    +KL+ L L +N+L TLP EI  L+ L +L+LR N L 
Sbjct: 261 KEIGNL----QKLQELRLDHNQLTTLPKEIGNLQNLKDLNLRSNQLT 303



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 84/210 (40%), Positives = 114/210 (54%), Gaps = 7/210 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L HNNL+  P    +  NL+ L L  N++T LPQ I     L  L    N  T
Sbjct: 175 QNLKELYLMHNNLTTLPKEVGQLQNLQKLILDKNQLTTLPQEIGKLQNLRGLALTGNQFT 234

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++ NL+NL+   L+ NQL   P +I ++  L+ L L +N L  +P+EI  L  L
Sbjct: 235 --TLPKEIGNLQNLQGLALTRNQLTTLPKEIGNLQKLQELRLDHNQLTTLPKEIGNLQNL 292

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N LT IP   G+L  LE L LS NQL +LP  I NL+ L+SL L  N L + P
Sbjct: 293 KDLNLRSNQLTTIPQEIGNLQNLEYLNLSSNQLTALPKEIENLQSLESLDLSGNPLTSFP 352

Query: 235 TEIITLKCLS----EKLKSLLLHNNKLRTL 260
            EI  L+ L     E + +LL    K+R L
Sbjct: 353 EEIGKLQHLKRLRLENIPTLLPQKEKIRKL 382



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 85/230 (36%), Positives = 123/230 (53%), Gaps = 7/230 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L+ N L+  P       NL+ L L +N +T LP+ +     L  LI   N 
Sbjct: 150 KLQNLQELHLWENQLTTIPQEIGNLQNLKELYLMHNNLTTLPKEVGQLQNLQKLILDKNQ 209

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP+++  L+NL+   L+GNQ    P +I ++  L+ L L  N L  +P+EI  L 
Sbjct: 210 LT--TLPQEIGKLQNLRGLALTGNQFTTLPKEIGNLQNLQGLALTRNQLTTLPKEIGNLQ 267

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  L L  N LT +P   G+L  L+ L L  NQL ++P  I NL+ L+ L L +N+L  
Sbjct: 268 KLQELRLDHNQLTTLPKEIGNLQNLKDLNLRSNQLTTIPQEIGNLQNLEYLNLSSNQLTA 327

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           LP EI  L+     L+SL L  N L + P EI  L+ L  L L + P ++
Sbjct: 328 LPKEIENLQS----LESLDLSGNPLTSFPEEIGKLQHLKRLRLENIPTLL 373



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/234 (36%), Positives = 120/234 (51%), Gaps = 7/234 (2%)

Query: 49  NDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLI 107
           N+  + P  +  L L    L   P       NL+ L+L  N++T +PQ I N   L  L 
Sbjct: 30  NEALQNPTQVRVLYLNAKKLIALPKEIGNLQNLQELNLWENQLTTIPQEIGNLQHLQKLD 89

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE 167
              N +T   LP ++  L++L+  NLS NQL   P +I ++  L+ L+L  N L  +P+E
Sbjct: 90  LGFNKITV--LPNEIGKLQSLQELNLSFNQLTTIPKEIWELQHLQTLHLVYNQLTTLPKE 147

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           I KL  L  L L  N LT IP   G+L  L+ L L  N L +LP  +  L+ L+ L+L  
Sbjct: 148 IGKLQNLQELHLWENQLTTIPQEIGNLQNLKELYLMHNNLTTLPKEVGQLQNLQKLILDK 207

Query: 228 NKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           N+L TLP EI  L    + L+ L L  N+  TLP EI  L+ L  L+L  N L 
Sbjct: 208 NQLTTLPQEIGKL----QNLRGLALTGNQFTTLPKEIGNLQNLQGLALTRNQLT 257


>gi|418727611|ref|ZP_13286199.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409958969|gb|EKO22746.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 379

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/203 (44%), Positives = 119/203 (58%), Gaps = 7/203 (3%)

Query: 81  LRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
           +R+LDLS NR   LP+ I     L  L    N LT   LPK++  LKNL+  NLS NQ++
Sbjct: 50  VRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTI--LPKEIGQLKNLRKLNLSANQIK 107

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
             P +I  +  L+ LYL NN L  +P+EI +L KL  L L  N LT +P   G L  L++
Sbjct: 108 TIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKS 167

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRT 259
           L LS NQ++++P  I  L+ L+SL L NN+L TLP EI  L    + L+SL L  N+L T
Sbjct: 168 LNLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQL----QNLQSLDLSTNRLTT 223

Query: 260 LPTEIITLKCLSELSLRDNPLVI 282
           LP EI  L+ L +L L  N L I
Sbjct: 224 LPQEIGHLQNLQDLYLVSNQLTI 246



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 108/305 (35%), Positives = 146/305 (47%), Gaps = 41/305 (13%)

Query: 3   YNYGSSSSSDSSDSDSFKTVS----IKTLDFSYSSLDSETLATQIELLPNNDYNKKPENI 58
           Y   +  S   + +D  KT+     ++TLD S +    +TL  +I          K +N+
Sbjct: 25  YELQAEESESGTYTDLAKTLQNPLKVRTLDLSANRF--KTLPKEI---------GKLKNL 73

Query: 59  DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA-- 115
             L L  N L+  P    +  NLR L+LS N+I  +P+ I     L +L   NN LT   
Sbjct: 74  QELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLP 133

Query: 116 -------------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL 156
                               +LP+++  LKNLK  NLS NQ++  P +I  +  L+ L L
Sbjct: 134 QEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQKLQSLGL 193

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
            NN L  +P+EI +L  L  L L  N LT +P   G L  L+ L L  NQL  LP  I  
Sbjct: 194 DNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQ 253

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           LK L++L L NN+L TL  EI  L    + LKSL L +N+L T P EI  LK L  L L 
Sbjct: 254 LKNLQTLNLRNNRLTTLSKEIEQL----QNLKSLDLGSNQLTTFPKEIGQLKNLQVLDLG 309

Query: 277 DNPLV 281
            N L 
Sbjct: 310 SNQLT 314



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 117/209 (55%), Gaps = 14/209 (6%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           ++K+L+ SY+ +  +T+  +IE         K + + +L L +N L+  P    +  NL+
Sbjct: 164 NLKSLNLSYNQI--KTIPKKIE---------KLQKLQSLGLDNNQLTTLPQEIGQLQNLQ 212

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           SLDLS NR+T LPQ I +   L  L   +N LT   LP ++  LKNL+  NL  N+L   
Sbjct: 213 SLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTI--LPNEIGQLKNLQTLNLRNNRLTTL 270

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
             +I  +  LK L LG+N L   P+EI +L  L VL LG N LT +P+  G L  L+ L 
Sbjct: 271 SKEIEQLQNLKSLDLGSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLD 330

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  NQL +LP  I  L+ L+ L L+NN+L
Sbjct: 331 LDSNQLTTLPQEIGQLQNLQELFLNNNQL 359



 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 94/242 (38%), Positives = 131/242 (54%), Gaps = 13/242 (5%)

Query: 46  LPNNDYNKKPENIDTL----LLY--HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           LPNN     P+ I  L     LY   N L+  P    +  NL+SL+LS N+I  +P+ I 
Sbjct: 124 LPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIE 183

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L +L   NN LT  +LP+++  L+NL+  +LS N+L   P +I  +  L+ LYL +
Sbjct: 184 KLQKLQSLGLDNNQLT--TLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVS 241

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P EI +L  L  L+L  N LT +      L  L++L L  NQL + P  I  LK
Sbjct: 242 NQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLGSNQLTTFPKEIGQLK 301

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+ L L +N+L TLP  I  LK     L++L L +N+L TLP EI  L+ L EL L +N
Sbjct: 302 NLQVLDLGSNQLTTLPEGIGQLK----NLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNN 357

Query: 279 PL 280
            L
Sbjct: 358 QL 359


>gi|421094655|ref|ZP_15555371.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410362717|gb|EKP13754.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|456891510|gb|EMG02221.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 422

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 94/227 (41%), Positives = 122/227 (53%), Gaps = 8/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L   P    K   +  L LSNN++T LP+ I     L  L   NNLLT
Sbjct: 63  QNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLT 122

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPKD+  L+NL+   L+ NQL+  P  I  +  L+ LYL NN L  +P++I +L  L
Sbjct: 123 --TLPKDIGQLQNLRELYLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKDIGQLQNL 180

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L GN L  +P   G L  L  L L++N L +LP  I NLK L  LLL NN+L TLP
Sbjct: 181 RELNLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLP 240

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  LK L      +L     L TLP +I  LK L EL+L  N + 
Sbjct: 241 KEIGKLKNL-----QVLYLGALLTTLPNDIGYLKSLRELNLSGNQIT 282



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 107/292 (36%), Positives = 142/292 (48%), Gaps = 20/292 (6%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMS 123
           HNN    P    +  NL  L LS+N++  LP+ I     +  L   NN LT  +LPKD+ 
Sbjct: 50  HNN-ETLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLT--TLPKDIG 106

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            LK L+  +L+ N L   P  I  +  L+ LYL NN L  +P++I +L  L  L L  N 
Sbjct: 107 KLKKLRELDLTNNLLTTLPKDIGQLQNLRELYLTNNQLKTLPKDIGQLQNLRELYLDNNQ 166

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           L  +P   G L  L  L L  NQL++LP  I  L+ L  L L NN L TLP +I  LK L
Sbjct: 167 LKTLPKDIGQLQNLRELNLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNL 226

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTY-KPPSLLELASRT 302
            E    LLL NN+L TLP EI  LK L  L L    L+    +D+ Y K    L L+   
Sbjct: 227 GE----LLLINNELTTLPKEIGKLKNLQVLYL--GALLTTLPNDIGYLKSLRELNLSGNQ 280

Query: 303 LKVHEIDYSQEHLPQNL-VQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCG 353
           +     D  Q    QNL V YL        PK  G     ++++++ +D  G
Sbjct: 281 ITTLPKDIGQ---LQNLQVLYLSENQLATLPKEIG-----QLQNLRELDLSG 324



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 108/212 (50%), Gaps = 25/212 (11%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L   P +  K  NL  L+L+NN +T LP+ I N   L  L+  NN LT
Sbjct: 178 QNLRELNLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELT 237

Query: 115 AESLPKDMSNLKNLKVF----------------------NLSGNQLEQFPIQILDIPTLK 152
             +LPK++  LKNL+V                       NLSGNQ+   P  I  +  L+
Sbjct: 238 --TLPKEIGKLKNLQVLYLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQ 295

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYL  N L  +P+EI +L  L  L L GN +T +P   G+L  L  L LS NQ+ +LP 
Sbjct: 296 VLYLSENQLATLPKEIGQLQNLRELDLSGNQITTLPKDIGELQSLRELNLSGNQITTLPK 355

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
            I  L+ L+ L L  N++ T+P EI  LK L 
Sbjct: 356 EIGKLQSLRELNLGGNQITTIPKEIGHLKNLQ 387



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 67/167 (40%), Positives = 98/167 (58%), Gaps = 6/167 (3%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +L + + N  ++++ +L  N  E  P +I ++  L  LYL +N L  +P+EI KL K
Sbjct: 30  TYHNLTEALQNPTDVRILSLHNN--ETLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQK 87

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           +  LSL  N LT +P   G L +L  L L++N L +LP  I  L+ L+ L L NN+L+TL
Sbjct: 88  IERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKDIGQLQNLRELYLTNNQLKTL 147

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P +I  L+ L E    L L NN+L+TLP +I  L+ L EL+L  N L
Sbjct: 148 PKDIGQLQNLRE----LYLDNNQLKTLPKDIGQLQNLRELNLDGNQL 190


>gi|417763987|ref|ZP_12411960.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353819|gb|EJP05972.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 452

 Score =  125 bits (314), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/260 (38%), Positives = 139/260 (53%), Gaps = 18/260 (6%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           +++ LD S++SL   TL  ++  L         EN+  L L+ N L+  P    +  NL+
Sbjct: 95  NLQELDLSFNSLT--TLPKEVGQL---------ENLQRLDLHQNRLATLPMEIGQLKNLQ 143

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
            LDL++N++T LP+ I     L  L    N LT  +LPK++  L+NLK  NL   QL   
Sbjct: 144 ELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLT--TLPKEIGQLQNLKTLNLIVTQLTTL 201

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P +I ++  LK L L +N L  +P+EI +L  L +L L  N +T +P   G L  L+ L 
Sbjct: 202 PKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLD 261

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           L  NQL  LP  I  L+ L+ L LH N+L TLP EI  L+ L E    L L  N+L TLP
Sbjct: 262 LHQNQLTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQE----LCLDENQLTTLP 317

Query: 262 TEIITLKCLSELSLRDNPLV 281
            EI  L+ L  L L +N L 
Sbjct: 318 KEIEQLQNLRVLDLDNNQLT 337



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/307 (32%), Positives = 146/307 (47%), Gaps = 45/307 (14%)

Query: 3   YNYGSSSSSDSSDSDSFKTVS----IKTLDFSYSSLDSETLATQIELLPNNDYNKKPENI 58
           Y   +  S   + +D  KT+     ++TLD  Y  L          +LP      + +N+
Sbjct: 25  YELQAEESESGTYTDLAKTLQNPLKVRTLDLRYQKLT---------ILPKEI--GQLQNL 73

Query: 59  DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP---------------- 102
             L L  N+L+  P    +  NL+ LDLS N +T LP+ +                    
Sbjct: 74  QRLDLSFNSLTILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLP 133

Query: 103 --------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYL 154
                   L  L   +N LT  +LPK++  L+NL+  +L  NQL   P +I  +  LK L
Sbjct: 134 MEIGQLKNLQELDLNSNKLT--TLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTL 191

Query: 155 YLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASI 214
            L    L  +P+EI +L  L  L+L  N LT +P   G+L  LE L+L +N++ +LP  I
Sbjct: 192 NLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEI 251

Query: 215 SNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
             L+ L+ L LH N+L  LP EI  L    + L+ L LH N+L TLP EI  L+ L EL 
Sbjct: 252 GQLQNLQWLDLHQNQLTILPKEIGQL----QNLQRLDLHQNQLTTLPKEIGQLQNLQELC 307

Query: 275 LRDNPLV 281
           L +N L 
Sbjct: 308 LDENQLT 314



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/226 (40%), Positives = 118/226 (52%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  P    +  NL  L L  NRIT LP+ I     L  L    N LT
Sbjct: 209 QNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLT 268

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+  +L  NQL   P +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 269 I--LPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNL 326

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N LT +P     L  L+ L L  N+L +LP  I  L+ L+ L L +N+L TLP
Sbjct: 327 RVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLALISNQLTTLP 386

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L+ L E    L L  N+L T P EI  LK L EL L  NPL
Sbjct: 387 KEIGQLQNLQE----LCLDENQLTTFPKEIRQLKNLQELHLYLNPL 428



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 85/230 (36%), Positives = 128/230 (55%), Gaps = 7/230 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           ++  N+  L L+ N L+  P    +  NL++L+L   ++T LP+ I     L TL   +N
Sbjct: 160 RQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDN 219

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  +LPK++  L+NL++  L  N++   P +I  +  L++L L  N L  +P+EI +L
Sbjct: 220 QLT--TLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQL 277

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L L  N LT +P   G L  L+ L L +NQL +LP  I  L+ L+ L L NN+L 
Sbjct: 278 QNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLT 337

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           TLP E++ L+     L+ L L +N+L TLP EI  L+ L  L+L  N L 
Sbjct: 338 TLPKEVLRLQS----LQVLALGSNRLSTLPKEIGQLQNLQVLALISNQLT 383


>gi|410940039|ref|ZP_11371859.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410784848|gb|EKR73819.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 473

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 92/228 (40%), Positives = 127/228 (55%), Gaps = 7/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N+++L L   NL+  P    +   L  L+LSNNR+  LPQ I     L  L    N LT
Sbjct: 73  QNLESLRLDGENLTTLPKEIGRLQKLEYLNLSNNRLVTLPQEIGQLQKLKELSLEKNQLT 132

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+  NLS N+L   P +I  +  LK LYL  N L  +P+EI KL KL
Sbjct: 133 --TLPKEIGRLQNLQKINLSNNRLVTLPREIGKLQKLKELYLEKNQLTTLPKEIGKLKKL 190

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L +  N LT +P+    L +LE L L +NQL +LP  I  L+ LK L L +N+   LP
Sbjct: 191 KNLYICDNQLTILPEEVIQLQELEELSLDNNQLATLPKKIGRLQKLKLLFLSDNQFVILP 250

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            EI  L    ++L+ L L +N+L TLP  I  L+ L  LSL +N  V+
Sbjct: 251 KEIGQL----QELEHLSLDDNQLATLPKGIGKLQKLENLSLSNNRFVV 294



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/247 (33%), Positives = 122/247 (49%), Gaps = 22/247 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           + +  L L  N L+  P    +  NL+ ++LSNNR+  LP+ I     L  L    N LT
Sbjct: 119 QKLKELSLEKNQLTTLPKEIGRLQNLQKINLSNNRLVTLPREIGKLQKLKELYLEKNQLT 178

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  LK LK   +  NQL   P +++ +  L+ L L NN L  +P++I +L KL
Sbjct: 179 --TLPKEIGKLKKLKNLYICDNQLTILPEEVIQLQELEELSLDNNQLATLPKKIGRLQKL 236

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  N    +P   G L +LE L L DNQL +LP  I  L+ L++L L NN+    P
Sbjct: 237 KLLFLSDNQFVILPKEIGQLQELEHLSLDDNQLATLPKGIGKLQKLENLSLSNNRFVVFP 296

Query: 235 TEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
             I  L+ L                    +KL+ L L++N+  T P E+  L+ L +L L
Sbjct: 297 KAIGRLQKLKALYLSDNQLAILSEQSLHLQKLEYLHLNHNRFTTFPKEVQQLQNLKDLHL 356

Query: 276 RDNPLVI 282
             N   I
Sbjct: 357 NGNQFTI 363



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/165 (44%), Positives = 99/165 (60%), Gaps = 4/165 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++  L+NL+   L G  L   P +I  +  L+YL L NN L  +P+EI +L KL  
Sbjct: 64  TLPKEIEQLQNLESLRLDGENLTTLPKEIGRLQKLEYLNLSNNRLVTLPQEIGQLQKLKE 123

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           LSL  N LT +P   G L  L+ + LS+N+L +LP  I  L+ LK L L  N+L TLP E
Sbjct: 124 LSLEKNQLTTLPKEIGRLQNLQKINLSNNRLVTLPREIGKLQKLKELYLEKNQLTTLPKE 183

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I  LK    KLK+L + +N+L  LP E+I L+ L ELSL +N L 
Sbjct: 184 IGKLK----KLKNLYICDNQLTILPEEVIQLQELEELSLDNNQLA 224



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 92/257 (35%), Positives = 121/257 (47%), Gaps = 13/257 (5%)

Query: 24  IKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRS 83
           I+  +    SLD+  LAT    LP      + + +  L L  N     P    +   L  
Sbjct: 208 IQLQELEELSLDNNQLAT----LPKKI--GRLQKLKLLFLSDNQFVILPKEIGQLQELEH 261

Query: 84  LDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
           L L +N++  LP+ I     L  L   NN       PK +  L+ LK   LS NQL    
Sbjct: 262 LSLDDNQLATLPKGIGKLQKLENLSLSNNRFVV--FPKAIGRLQKLKALYLSDNQLAILS 319

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
            Q L +  L+YL+L +N     P+E+ +L  L  L L GN  T +P   G L +LE L L
Sbjct: 320 EQSLHLQKLEYLHLNHNRFTTFPKEVQQLQNLKDLHLNGNQFTILPQGIGQLQKLEYLFL 379

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
            +NQL  LP  I  L+ LK L L NN+L  LP  I  L    +KL+ L L NN+L TLP 
Sbjct: 380 DNNQLTILPQGIGKLQKLKELSLDNNQLTILPKGIGKL----QKLEYLNLSNNQLTTLPK 435

Query: 263 EIITLKCLSELSLRDNP 279
           EI  L+ L  L L   P
Sbjct: 436 EIRKLQNLHFLGLEGMP 452



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 87/249 (34%), Positives = 124/249 (49%), Gaps = 22/249 (8%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K + +  L L  N L+  P    K   L++L + +N++T LP+ +     L  L   NN 
Sbjct: 163 KLQKLKELYLEKNQLTTLPKEIGKLKKLKNLYICDNQLTILPEEVIQLQELEELSLDNNQ 222

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L   +LPK +  L+ LK+  LS NQ    P +I  +  L++L L +N L  +P+ I KL 
Sbjct: 223 LA--TLPKKIGRLQKLKLLFLSDNQFVILPKEIGQLQELEHLSLDDNQLATLPKGIGKLQ 280

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  LSL  N     P   G L +L+AL LSDNQL  L     +L+ L+ L L++N+  T
Sbjct: 281 KLENLSLSNNRFVVFPKAIGRLQKLKALYLSDNQLAILSEQSLHLQKLEYLHLNHNRFTT 340

Query: 233 LPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            P E+  L+ L                    +KL+ L L NN+L  LP  I  L+ L EL
Sbjct: 341 FPKEVQQLQNLKDLHLNGNQFTILPQGIGQLQKLEYLFLDNNQLTILPQGIGKLQKLKEL 400

Query: 274 SLRDNPLVI 282
           SL +N L I
Sbjct: 401 SLDNNQLTI 409



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 69/175 (39%), Positives = 94/175 (53%), Gaps = 4/175 (2%)

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE 167
           +R N  T  +L K + N  ++    L  +QL   P +I  +  L+ L L   +L  +P+E
Sbjct: 32  SRENNGTYYNLNKALQNPLDVLALELYDSQLTTLPKEIEQLQNLESLRLDGENLTTLPKE 91

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           I +L KL  L+L  N L  +P   G L +L+ L L  NQL +LP  I  L+ L+ + L N
Sbjct: 92  IGRLQKLEYLNLSNNRLVTLPQEIGQLQKLKELSLEKNQLTTLPKEIGRLQNLQKINLSN 151

Query: 228 NKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           N+L TLP EI  L    +KLK L L  N+L TLP EI  LK L  L + DN L I
Sbjct: 152 NRLVTLPREIGKL----QKLKELYLEKNQLTTLPKEIGKLKKLKNLYICDNQLTI 202


>gi|455791548|gb|EMF43355.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 371

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/227 (39%), Positives = 122/227 (53%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+       +  NL+ LD  +N+IT L Q I     L  L   NN LT
Sbjct: 94  KNLQELNLDANQLTTILKEIEQLKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLT 153

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  LKNL+  NL  NQL   P +I  +  L+ LYL  N L  +P+EI +L KL
Sbjct: 154 --TLPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKL 211

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N L  +P     L  L+ L LS+NQL +LP  I  L+ L+ L L+ N+L T+P
Sbjct: 212 QELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIP 271

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L    + L+ L L  N+ +T+P E   LK L EL+L  N L 
Sbjct: 272 NEIAQL----QNLQVLFLSYNQFKTIPVEFGQLKNLQELNLDANQLT 314



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 112/203 (55%), Gaps = 9/203 (4%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLL 113
           +N+  L L +N L+  P    +  NL++L+L NN++  LP+ I     L  L ++ N L+
Sbjct: 140 QNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLM 199

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++  L+ L+  NL  NQL   P +I  +  L+ LYL  N L  +P+EI +L K
Sbjct: 200 T---LPKEIGQLEKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEK 256

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT IP+    L  L+ L LS NQ +++P     LK L+ L L  N+L T+
Sbjct: 257 LQKLYLNANQLTTIPNEIAQLQNLQVLFLSYNQFKTIPVEFGQLKNLQELNLDANQLTTI 316

Query: 234 PTEIITLKCLSEKLKSLLLHNNK 256
           P EI  L    + L++L L NN+
Sbjct: 317 PKEIGQL----QNLQTLYLRNNQ 335



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/166 (42%), Positives = 95/166 (57%), Gaps = 4/166 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++LPK +  LKNL+  NL  NQL     +I  +  L+ L L  N L  + +EI +L  L 
Sbjct: 61  KALPKKIGQLKNLQELNLDANQLTTILKEIEQLKNLQELNLDANQLTTILKEIEQLKNLQ 120

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           VL  G N +T +    G L  L+ L L++NQL +LP  I  LK L++L L NN+L TLP 
Sbjct: 121 VLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPK 180

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           EI  LK L E    L L  N+L TLP EI  L+ L EL+L +N L+
Sbjct: 181 EIAQLKNLQE----LYLSENQLMTLPKEIGQLEKLQELNLWNNQLI 222



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/166 (39%), Positives = 91/166 (54%), Gaps = 4/166 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           + L K + N  +++V +LS  +L+  P +I  +  L+ L L  N L  + +EI +L  L 
Sbjct: 38  QDLTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQELNLDANQLTTILKEIEQLKNLQ 97

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L+L  N LT I      L  L+ L    NQ+ +L   I  L+ LK L L+NN+L TLP 
Sbjct: 98  ELNLDANQLTTILKEIEQLKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPK 157

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           EI  LK     L++L L NN+L TLP EI  LK L EL L +N L+
Sbjct: 158 EIGQLK----NLQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLM 199



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 3/131 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E +  L L++N L   P   ++  NL+ L LS N++  LP+ I     L  L    N LT
Sbjct: 209 EKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNANQLT 268

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             ++P +++ L+NL+V  LS NQ +  P++   +  L+ L L  N L  +P+EI +L  L
Sbjct: 269 --TIPNEIAQLQNLQVLFLSYNQFKTIPVEFGQLKNLQELNLDANQLTTIPKEIGQLQNL 326

Query: 175 HVLSLGGNSLT 185
             L L  N  +
Sbjct: 327 QTLYLRNNQFS 337



 Score = 44.3 bits (103), Expect = 0.10,   Method: Compositional matrix adjust.
 Identities = 45/156 (28%), Positives = 63/156 (40%), Gaps = 42/156 (26%)

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           IN  CK+    +   +  D+     +   +  L LS+ +L++LP  I  LK L+ L L  
Sbjct: 21  INLSCKIQAEEVEPEAYQDLTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQELNLDA 80

Query: 228 NKLRTLPTEIITLKCLSE------------------------------------------ 245
           N+L T+  EI  LK L E                                          
Sbjct: 81  NQLTTILKEIEQLKNLQELNLDANQLTTILKEIEQLKNLQVLDFGSNQITTLSQEIGQLQ 140

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            LK L L+NN+L TLP EI  LK L  L+L +N L+
Sbjct: 141 NLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLI 176


>gi|421118971|ref|ZP_15579298.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348311|gb|EKO99137.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 498

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 100/260 (38%), Positives = 139/260 (53%), Gaps = 18/260 (6%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           +++ LD S++SL   TL  ++  L         EN+  L L+ N L+  P    +  NL+
Sbjct: 141 NLQELDLSFNSLT--TLPKEVGQL---------ENLQRLDLHQNRLATLPMEIGQLKNLQ 189

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
            LDL++N++T LP+ I     L  L    N LT  +LPK++  L+NLK  NL   QL   
Sbjct: 190 ELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLT--TLPKEIGQLQNLKTLNLIVTQLTTL 247

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P +I ++  LK L L +N L  +P+EI +L  L +L L  N +T +P   G L  L+ L 
Sbjct: 248 PKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLD 307

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           L  NQL  LP  I  L+ L+ L LH N+L TLP EI  L+ L E    L L  N+L TLP
Sbjct: 308 LHQNQLTILPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQE----LCLDENQLTTLP 363

Query: 262 TEIITLKCLSELSLRDNPLV 281
            EI  L+ L  L L +N L 
Sbjct: 364 KEIEQLQNLRVLDLDNNQLT 383



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 92/226 (40%), Positives = 118/226 (52%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  P    +  NL  L L  NRIT LP+ I     L  L    N LT
Sbjct: 255 QNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLT 314

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+  +L  NQL   P +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 315 I--LPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNL 372

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N LT +P     L  L+ L L  N+L +LP  I  L+ L+ L L +N+L TLP
Sbjct: 373 RVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLALISNQLTTLP 432

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L+ L E    L L  N+L T P EI  LK L EL L  NPL
Sbjct: 433 KEIGQLQNLQE----LCLDENQLTTFPKEIRQLKNLQELHLYLNPL 474



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 85/230 (36%), Positives = 128/230 (55%), Gaps = 7/230 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           ++  N+  L L+ N L+  P    +  NL++L+L   ++T LP+ I     L TL   +N
Sbjct: 206 RQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDN 265

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  +LPK++  L+NL++  L  N++   P +I  +  L++L L  N L  +P+EI +L
Sbjct: 266 QLT--TLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTILPKEIGQL 323

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L L  N LT +P   G L  L+ L L +NQL +LP  I  L+ L+ L L NN+L 
Sbjct: 324 QNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLT 383

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           TLP E++ L+     L+ L L +N+L TLP EI  L+ L  L+L  N L 
Sbjct: 384 TLPKEVLRLQS----LQVLALGSNRLSTLPKEIGQLQNLQVLALISNQLT 429



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 121/248 (48%), Gaps = 36/248 (14%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNL 112
           + P  + TL L +  L+  P    +  NL+ LDLS N +T                    
Sbjct: 45  QNPLKVRTLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLT-------------------- 84

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
                LPK++  L+NL+  +LS N L   P ++  +  L+ L L +  L  +P+EI +L 
Sbjct: 85  ----ILPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLR 140

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  NSLT +P   G L  L+ L L  N+L +LP  I  LK L+ L L++NKL T
Sbjct: 141 NLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTT 200

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKP 292
           LP EI  L+ L E    L LH N+L TLP EI  L+ L  L+L         V+ +T  P
Sbjct: 201 LPKEIRQLRNLQE----LDLHRNQLTTLPKEIGQLQNLKTLNL--------IVTQLTTLP 248

Query: 293 PSLLELAS 300
             + EL +
Sbjct: 249 KEIGELQN 256



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 87/168 (51%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N   ++  +L   +L   P +I  +  L+ L L  NSL  +P+EI +L  
Sbjct: 36  TYTDLAKTLQNPLKVRTLDLRYQKLTILPKEIGQLQNLQRLDLSFNSLTILPKEIGQLRN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  NSLT +P   G L  L+ L L+  +L +LP  I  L+ L+ L L  N L TL
Sbjct: 96  LQELDLSFNSLTTLPKEVGQLENLQRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P E+  L    E L+ L LH N+L TLP EI  LK L EL L  N L 
Sbjct: 156 PKEVGQL----ENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLT 199


>gi|255080388|ref|XP_002503774.1| predicted protein [Micromonas sp. RCC299]
 gi|226519041|gb|ACO65032.1| predicted protein [Micromonas sp. RCC299]
          Length = 683

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/225 (36%), Positives = 118/225 (52%), Gaps = 13/225 (5%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTL----IARNNLLTAE 116
           L LY N L+  P   ++ T+LR L   N+++T +P  I    L++L    + +N L    
Sbjct: 304 LFLYGNQLTSVPAEIAQLTSLRELGFYNSQLTSVPAEIGQ--LTSLEKWDLGKNEL---A 358

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           S+P ++  L  L+   L GN+L   P +I  + +LK L LG N L  +P +I +L  L  
Sbjct: 359 SVPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKLLLGCNQLTSLPADIGQLTSLWE 418

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L GN LT +P   G L  LE L LSDNQL S+P  I  L  L  L L+ N+L ++P E
Sbjct: 419 LRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEIGQLTSLTELYLNGNQLTSVPAE 478

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I  L  L E    L  +N++L ++P EI  L  L +  L  N L 
Sbjct: 479 IAQLTSLRE----LGFYNSQLTSVPAEIGQLTSLEKWDLGKNELA 519



 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/222 (38%), Positives = 111/222 (50%), Gaps = 7/222 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L  N L+  P    + T+LR L L NNR+T +P  I     L+ L    N LT  S+P
Sbjct: 212 LSLTKNQLTSLPAEIGQLTSLRELALDNNRLTSVPAEIGQLTSLTELNLNGNQLT--SVP 269

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            ++  L +L    L GNQL   P  I  + +L+ L+L  N L  VP EI +L  L  L  
Sbjct: 270 AEVVQLTSLDTLRLGGNQLTSVPADIGQLTSLRRLFLYGNQLTSVPAEIAQLTSLRELGF 329

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             + LT +P   G L  LE   L  N+L S+PA I  L  L+ L L  N+L +LP EI  
Sbjct: 330 YNSQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQ 389

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L      LK LLL  N+L +LP +I  L  L EL L  N L 
Sbjct: 390 LAS----LKKLLLGCNQLTSLPADIGQLTSLWELRLDGNRLT 427



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 87/222 (39%), Positives = 118/222 (53%), Gaps = 7/222 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L  N L+  P    + T+L  LDLS+N++T +P  I     L+ L    N LT  S+P
Sbjct: 419 LRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEIGQLTSLTELYLNGNQLT--SVP 476

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            +++ L +L+      +QL   P +I  + +L+   LG N L  VP EI +L  L  L L
Sbjct: 477 AEIAQLTSLRELGFYNSQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTALRELRL 536

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
            GN LT +P   G L  L+ L+L  NQL SLPA I  L  L  L L  N+L ++P EI  
Sbjct: 537 DGNRLTSLPAEIGQLASLKKLLLGCNQLTSLPADIGQLTSLWELRLDGNRLTSVPAEIGQ 596

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L  L EKL    L +N+L ++PTEI  L  L+EL L  N L 
Sbjct: 597 LTSL-EKLD---LSDNQLTSVPTEIGQLTSLTELYLNGNQLT 634



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 85/222 (38%), Positives = 114/222 (51%), Gaps = 7/222 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L +N L+  P    + T+L  L+L+ N++T +P  +     L TL    N LT  S+P
Sbjct: 235 LALDNNRLTSVPAEIGQLTSLTELNLNGNQLTSVPAEVVQLTSLDTLRLGGNQLT--SVP 292

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            D+  L +L+   L GNQL   P +I  + +L+ L   N+ L  VP EI +L  L    L
Sbjct: 293 ADIGQLTSLRRLFLYGNQLTSVPAEIAQLTSLRELGFYNSQLTSVPAEIGQLTSLEKWDL 352

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
           G N L  +P   G L  L  L L  N+L SLPA I  L  LK LLL  N+L +LP +I  
Sbjct: 353 GKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKLLLGCNQLTSLPADIGQ 412

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L  L E    L L  N+L ++P EI  L  L +L L DN L 
Sbjct: 413 LTSLWE----LRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLT 450



 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/222 (38%), Positives = 113/222 (50%), Gaps = 7/222 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           LLL  N L+  P +  + T+L  L L  NR+T +P  I     L  L   +N LT  S+P
Sbjct: 396 LLLGCNQLTSLPADIGQLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLT--SVP 453

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            ++  L +L    L+GNQL   P +I  + +L+ L   N+ L  VP EI +L  L    L
Sbjct: 454 TEIGQLTSLTELYLNGNQLTSVPAEIAQLTSLRELGFYNSQLTSVPAEIGQLTSLEKWDL 513

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
           G N L  +P   G L  L  L L  N+L SLPA I  L  LK LLL  N+L +LP +I  
Sbjct: 514 GKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKLLLGCNQLTSLPADIGQ 573

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L  L E    L L  N+L ++P EI  L  L +L L DN L 
Sbjct: 574 LTSLWE----LRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLT 611



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/213 (36%), Positives = 113/213 (53%), Gaps = 13/213 (6%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTL----IARNNLLTAE 116
           L L  N L+  P   ++ T+LR L   N+++T +P  I    L++L    + +N L    
Sbjct: 465 LYLNGNQLTSVPAEIAQLTSLRELGFYNSQLTSVPAEIGQ--LTSLEKWDLGKNEL---A 519

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           S+P ++  L  L+   L GN+L   P +I  + +LK L LG N L  +P +I +L  L  
Sbjct: 520 SVPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKLLLGCNQLTSLPADIGQLTSLWE 579

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L GN LT +P   G L  LE L LSDNQL S+P  I  L  L  L L+ N+L ++PTE
Sbjct: 580 LRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEIGQLTSLTELYLNGNQLTSVPTE 639

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           I  L  L +    L L  N+L+++P  I  L+ 
Sbjct: 640 IAQLSLLEQ----LWLSGNRLKSVPAAIRELRA 668



 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 86/241 (35%), Positives = 112/241 (46%), Gaps = 26/241 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-----------LSTLIARNN 111
           L  N L+  P    + T LR L L  NR+T LP  I               L++L A   
Sbjct: 352 LGKNELASVPAEIGQLTALRELRLDGNRLTSLPAEIGQLASLKKLLLGCNQLTSLPADIG 411

Query: 112 LLTA-----------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
            LT+            S+P ++  L +L+  +LS NQL   P +I  + +L  LYL  N 
Sbjct: 412 QLTSLWELRLDGNRLTSVPAEIGQLTSLEKLDLSDNQLTSVPTEIGQLTSLTELYLNGNQ 471

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  VP EI +L  L  L    + LT +P   G L  LE   L  N+L S+PA I  L  L
Sbjct: 472 LTSVPAEIAQLTSLRELGFYNSQLTSVPAEIGQLTSLEKWDLGKNELASVPAEIGQLTAL 531

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           + L L  N+L +LP EI  L      LK LLL  N+L +LP +I  L  L EL L  N L
Sbjct: 532 RELRLDGNRLTSLPAEIGQLAS----LKKLLLGCNQLTSLPADIGQLTSLWELRLDGNRL 587

Query: 281 V 281
            
Sbjct: 588 T 588



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 89/165 (53%), Gaps = 4/165 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++P ++  L ++   +L+ NQL   P +I  + +L+ L L NN L  VP EI +L  L  
Sbjct: 198 AVPAEIGQLTSMVKLSLTKNQLTSLPAEIGQLTSLRELALDNNRLTSVPAEIGQLTSLTE 257

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+L GN LT +P     L  L+ L L  NQL S+PA I  L  L+ L L+ N+L ++P E
Sbjct: 258 LNLNGNQLTSVPAEVVQLTSLDTLRLGGNQLTSVPADIGQLTSLRRLFLYGNQLTSVPAE 317

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I  L  L E    L  +N++L ++P EI  L  L +  L  N L 
Sbjct: 318 IAQLTSLRE----LGFYNSQLTSVPAEIGQLTSLEKWDLGKNELA 358


>gi|421118977|ref|ZP_15579304.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410348317|gb|EKO99143.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 333

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 89/226 (39%), Positives = 122/226 (53%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+       +  NL+ LD  +N+IT L Q I     L  L   NN LT
Sbjct: 71  KNLQELNLDANQLTTILKEIEQLKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLT 130

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  LKNL+  NL  NQL   P +I  +  L+ LYL  N L  +P+EI +L KL
Sbjct: 131 --TLPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKL 188

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N L  +P     L  L+ L LS+NQL +LP  I  L+ L+ L L+ N+L T+P
Sbjct: 189 QELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIP 248

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L    + L+ L L  N+ +T+P E   LK L EL+L  N L
Sbjct: 249 NEIAQL----QNLQVLFLSYNQFKTIPVEFGQLKNLQELNLDANQL 290



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 112/203 (55%), Gaps = 9/203 (4%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLL 113
           +N+  L L +N L+  P    +  NL++L+L NN++  LP+ I     L  L ++ N L+
Sbjct: 117 QNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLM 176

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++  L+ L+  NL  NQL   P +I  +  L+ LYL  N L  +P+EI +L K
Sbjct: 177 T---LPKEIGQLEKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEK 233

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT IP+    L  L+ L LS NQ +++P     LK L+ L L  N+L T+
Sbjct: 234 LQKLYLNANQLTTIPNEIAQLQNLQVLFLSYNQFKTIPVEFGQLKNLQELNLDANQLTTI 293

Query: 234 PTEIITLKCLSEKLKSLLLHNNK 256
           P EI  L    + L++L L NN+
Sbjct: 294 PKEIGQL----QNLQTLYLRNNQ 312



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/166 (43%), Positives = 96/166 (57%), Gaps = 4/166 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++LPK +  LKNL+  NL  NQL     +I  +  L+ L  G+N +  + +EI +L  L 
Sbjct: 61  KALPKKIGQLKNLQELNLDANQLTTILKEIEQLKNLQVLDFGSNQITTLSQEIGQLQNLK 120

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           VL L  N LT +P   G L  L+ L L +NQL +LP  I+ LK L+ L L  N+L TLP 
Sbjct: 121 VLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPK 180

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           EI  L    EKL+ L L NN+L TLP EI  LK L EL L +N L+
Sbjct: 181 EIGQL----EKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLM 222



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 3/131 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E +  L L++N L   P   ++  NL+ L LS N++  LP+ I     L  L    N LT
Sbjct: 186 EKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNANQLT 245

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             ++P +++ L+NL+V  LS NQ +  P++   +  L+ L L  N L  +P+EI +L  L
Sbjct: 246 --TIPNEIAQLQNLQVLFLSYNQFKTIPVEFGQLKNLQELNLDANQLTTIPKEIGQLQNL 303

Query: 175 HVLSLGGNSLT 185
             L L  N  +
Sbjct: 304 QTLYLRNNQFS 314



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 19/133 (14%)

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           IN  CK+    +   +  D+     +   +  L LS+ +L++LP  I  LK L+ L L  
Sbjct: 21  INLSCKIQAEEVEPEAYQDLTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQELNLDA 80

Query: 228 NKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLK 268
           N+L T+  EI  LK L                    + LK L L+NN+L TLP EI  LK
Sbjct: 81  NQLTTILKEIEQLKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLK 140

Query: 269 CLSELSLRDNPLV 281
            L  L+L +N L+
Sbjct: 141 NLQTLNLWNNQLI 153



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 53/113 (46%), Gaps = 3/113 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L   P    +   L+ L L+ N++T +P  I     L  L    N   
Sbjct: 209 KNLQELYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIPNEIAQLQNLQVLFLSYN--Q 266

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE 167
            +++P +   LKNL+  NL  NQL   P +I  +  L+ LYL NN  +   +E
Sbjct: 267 FKTIPVEFGQLKNLQELNLDANQLTTIPKEIGQLQNLQTLYLRNNQFSIEEKE 319


>gi|418755319|ref|ZP_13311526.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964330|gb|EKO32220.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 492

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 90/229 (39%), Positives = 123/229 (53%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L  N L   P    K  NL+ L+L+ NR+ +LP+ I     L  L   +N 
Sbjct: 133 KLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQELHLTDNQ 192

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LPK++  L+NL+   L+ NQL   P +I  +  L+ L+L NN L  +P+EI KL 
Sbjct: 193 LT--TLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKEIGKLQ 250

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N LT +P   G L  L+ L L +NQL +LP  I  L+ L+ L L  N+L T
Sbjct: 251 NLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTT 310

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP EI  L    +KLK L    N+  T+P EI  L+ L  L+L  N L 
Sbjct: 311 LPEEIEKL----QKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLT 355



 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 96/229 (41%), Positives = 126/229 (55%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K + ++ L L +N L+  P    K  NL+ L LSNN++T LP+ I     L  L   NN 
Sbjct: 225 KLQKLEALHLENNQLTTLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQ 284

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LPK++  L+NL+   L  N+L   P +I  +  LK LY   N    VP EI  L 
Sbjct: 285 LT--TLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQ 342

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L+L  N LT +P   G+L  L+ L LSDNQL +LP  I  L+ L+ L L +N+L T
Sbjct: 343 NLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQNLQLLYLSDNQLTT 402

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP EI  L+ L E    L L +N+L TLP EI  L+ L  L L DNPL 
Sbjct: 403 LPKEIGKLQNLQE----LYLSDNQLATLPKEIENLQSLEYLYLSDNPLT 447



 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 88/208 (42%), Positives = 118/208 (56%), Gaps = 9/208 (4%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLTAESLPKDMSNL 125
           L   P    K  NLR LDLS+N++  LP+ I     L  L + RN L    +LP+++  L
Sbjct: 124 LWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRL---ANLPEEIGKL 180

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           +NL+  +L+ NQL   P +I  +  L++L L NN L  +P+EI KL KL  L L  N LT
Sbjct: 181 QNLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLT 240

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
            +P   G L  L+ L LS+NQL +LP  I  L+ L+ L L NN+L TLP EI  L+ L E
Sbjct: 241 TLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQNLQE 300

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSEL 273
               L L  N+L TLP EI  L+ L +L
Sbjct: 301 ----LRLDYNRLTTLPEEIEKLQKLKKL 324



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 94/252 (37%), Positives = 130/252 (51%), Gaps = 30/252 (11%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K +N+  L L  N L+  P    K  NL+ L L+NN++T LP+ I     L  L   NN 
Sbjct: 179 KLQNLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQ 238

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LPK++  L+NL+   LS NQL   P +I  +  L+ L+L NN L  +P+EI KL 
Sbjct: 239 LT--TLPKEIGKLQNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLTTLPKEIGKLQ 296

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLH------ 226
            L  L L  N LT +P+    L +L+ L  S NQ  ++P  I NL+ L++L L+      
Sbjct: 297 NLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQFTTVPEEIWNLQNLQALNLYSNQLTS 356

Query: 227 -----------------NNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
                            +N+L TLP EI  L    + L+ L L +N+L TLP EI  L+ 
Sbjct: 357 LPKEIGNLQNLQLLYLSDNQLATLPKEIGKL----QNLQLLYLSDNQLTTLPKEIGKLQN 412

Query: 270 LSELSLRDNPLV 281
           L EL L DN L 
Sbjct: 413 LQELYLSDNQLA 424



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 117/212 (55%), Gaps = 7/212 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K +++  L L +N L+  P    K  NL+ L L  NR+T LP+ I     L  L +  N 
Sbjct: 271 KLQHLQELHLENNQLTTLPKEIGKLQNLQELRLDYNRLTTLPEEIEKLQKLKKLYSSGNQ 330

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
            T  ++P+++ NL+NL+  NL  NQL   P +I ++  L+ LYL +N L  +P+EI KL 
Sbjct: 331 FT--TVPEEIWNLQNLQALNLYSNQLTSLPKEIGNLQNLQLLYLSDNQLATLPKEIGKLQ 388

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L +L L  N LT +P   G L  L+ L LSDNQL +LP  I NL+ L+ L L +N L +
Sbjct: 389 NLQLLYLSDNQLTTLPKEIGKLQNLQELYLSDNQLATLPKEIENLQSLEYLYLSDNPLTS 448

Query: 233 LPTEIITLKCLS----EKLKSLLLHNNKLRTL 260
            P EI  L+ L     E + +LL    K+R L
Sbjct: 449 FPEEIGKLQHLKWLRLENIPTLLPQKEKIRKL 480



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/165 (43%), Positives = 96/165 (58%), Gaps = 4/165 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++  L+NL+  +LS NQL   P +I  +  L+ L L  N L ++P EI KL  L  
Sbjct: 126 TLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGKLQNLQE 185

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N LT +P     L  L+ L L++NQL +LP  I  L+ L++L L NN+L TLP E
Sbjct: 186 LHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKLQKLEALHLENNQLTTLPKE 245

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I  L    + L+ L L NN+L TLP EI  L+ L EL L +N L 
Sbjct: 246 IGKL----QNLQWLGLSNNQLTTLPKEIGKLQHLQELHLENNQLT 286



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/148 (42%), Positives = 87/148 (58%), Gaps = 4/148 (2%)

Query: 134 SGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGD 193
           S + L   P +I  +  L+ L L +N L  +P+EI KL  L  L+L  N L ++P+  G 
Sbjct: 120 SNDPLWTLPKEIGKLQNLRDLDLSSNQLMTLPKEIGKLQNLQKLNLTRNRLANLPEEIGK 179

Query: 194 LYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLH 253
           L  L+ L L+DNQL +LP  I  L+ L+ L L+NN+L TLP EI  L    +KL++L L 
Sbjct: 180 LQNLQELHLTDNQLTTLPKEIEKLQNLQWLGLNNNQLTTLPKEIGKL----QKLEALHLE 235

Query: 254 NNKLRTLPTEIITLKCLSELSLRDNPLV 281
           NN+L TLP EI  L+ L  L L +N L 
Sbjct: 236 NNQLTTLPKEIGKLQNLQWLGLSNNQLT 263


>gi|398341375|ref|ZP_10526078.1| hypothetical protein LkirsB1_19650 [Leptospira kirschneri serovar
           Bim str. 1051]
          Length = 374

 Score =  125 bits (313), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 95/248 (38%), Positives = 128/248 (51%), Gaps = 22/248 (8%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L  N L+  P    +  NLR L+L +N+ T LP+ +     L  L   +N 
Sbjct: 65  KLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDNQFTILPKEVEKLENLKELSLGSNR 124

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP ++  LKNL+V  L+ NQ +  P +I  +  L+ L LGNN L  +P EI +L 
Sbjct: 125 LT--TLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNNQLTALPNEIGQLQ 182

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L LG N LT +P+  G L +L+ L LS N+L +LP  I  L+ L+ L L +N+L  
Sbjct: 183 NLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQLQNLQDLYLGSNQLTI 242

Query: 233 LPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           LP EI  LK L                    + LKSL L NN+L T P EI  LK L  L
Sbjct: 243 LPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIEQLKNLQVL 302

Query: 274 SLRDNPLV 281
            L  N L 
Sbjct: 303 DLGSNQLT 310



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/230 (40%), Positives = 124/230 (53%), Gaps = 7/230 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           +K EN+  L L  N L+  P+   +  NLR L L++N+   +P+ I     L TL   NN
Sbjct: 110 EKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQLKNLQTLNLGNN 169

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LTA  LP ++  L+NLK  +L  N+L   P +I  +  L+ LYL  N L  +P EI +L
Sbjct: 170 QLTA--LPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLTTLPNEIGQL 227

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L LG N LT +P+  G L  L+ L L  N+L +L   I  L+ LKSL L NN+L 
Sbjct: 228 QNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLT 287

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           T P EI  LK     L+ L L +N+L TLP EI  LK L  L L  N L 
Sbjct: 288 TFPKEIEQLK----NLQVLDLGSNQLTTLPEEIEQLKNLQVLDLGSNQLT 333



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 86/230 (37%), Positives = 122/230 (53%), Gaps = 7/230 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           + P ++  L L  N     P    K  NL+ L+L+ N++T LP+ I     L  L   +N
Sbjct: 41  QNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLHDN 100

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
             T   LPK++  L+NLK  +L  N+L   P +I  +  L+ L L +N    +P+EI +L
Sbjct: 101 QFTI--LPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTIPKEIGQL 158

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L+LG N LT +P+  G L  L++L L  N+L +LP  I  L+ L+ L L  N+L 
Sbjct: 159 KNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLT 218

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           TLP EI  L    + L+ L L +N+L  LP EI  LK L  L LR N L 
Sbjct: 219 TLPNEIGQL----QNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLT 264



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 102/207 (49%), Gaps = 27/207 (13%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N+ TL L +N L+  P+   +  NL+SLDL +NR+T LP  I     L  L    N LT
Sbjct: 159 KNLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLTTLPNEIGQLQKLQDLYLSTNRLT 218

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL------------------ 156
             +LP ++  L+NL+   L  NQL   P +I  +  L+ LYL                  
Sbjct: 219 --TLPNEIGQLQNLQDLYLGSNQLTILPNEIGQLKNLQTLYLRSNRLTTLSKDIEQLQNL 276

Query: 157 -----GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
                 NN L   P+EI +L  L VL LG N LT +P+    L  L+ L L  NQL +LP
Sbjct: 277 KSLDLWNNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEEIEQLKNLQVLDLGSNQLTTLP 336

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEII 238
             I  L+ L+ L L+NN+L +   E I
Sbjct: 337 EGIGQLQNLQ-LYLNNNQLSSEEKERI 362



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/168 (37%), Positives = 89/168 (52%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLS N+ +  P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 32  TYRDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKN 91

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N  T +P     L  L+ L L  N+L +LP  I  LK L+ L L +N+ +T+
Sbjct: 92  LRKLNLHDNQFTILPKEVEKLENLKELSLGSNRLTTLPNEIGQLKNLRVLKLTHNQFKTI 151

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  LK     L++L L NN+L  LP EI  L+ L  L L  N L 
Sbjct: 152 PKEIGQLK----NLQTLNLGNNQLTALPNEIGQLQNLKSLDLGSNRLT 195



 Score = 60.8 bits (146), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 52/141 (36%), Positives = 77/141 (54%), Gaps = 10/141 (7%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           + Q+ +LPN     K  N+ TL L  N L+    +  +  NL+SLDL NN++T  P+ I 
Sbjct: 237 SNQLTILPNEIGQLK--NLQTLYLRSNRLTTLSKDIEQLQNLKSLDLWNNQLTTFPKEIE 294

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L  L   +N LT  +LP+++  LKNL+V +L  NQL   P  I  +  L+ LYL N
Sbjct: 295 QLKNLQVLDLGSNQLT--TLPEEIEQLKNLQVLDLGSNQLTTLPEGIGQLQNLQ-LYLNN 351

Query: 159 NSLNHVPRE-INKL---CKLH 175
           N L+   +E I KL   C+++
Sbjct: 352 NQLSSEEKERIRKLLPKCQIY 372


>gi|255073607|ref|XP_002500478.1| predicted protein [Micromonas sp. RCC299]
 gi|226515741|gb|ACO61736.1| predicted protein [Micromonas sp. RCC299]
          Length = 383

 Score =  125 bits (313), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 90/244 (36%), Positives = 122/244 (50%), Gaps = 22/244 (9%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           +++ L L  N L+  P    + T+L  LDL +N++T +P  I     L+ L   +N LT 
Sbjct: 99  SLEDLSLEANRLTSVPTEIGQLTSLTQLDLRDNQLTSVPAEIWRLTSLTYLNLNDNQLT- 157

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            S+P ++  L +L+   LS N L   P +I  +  L  L +  N L  VP EI +L  L 
Sbjct: 158 -SVPAEIRQLTSLRELWLSANHLTSVPAEIWQLAALVKLSVTENQLTSVPAEIWQLTSLT 216

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L GN LT +P   G L  L AL L DNQL S+PA I  ++ L  L LH N+L +LP 
Sbjct: 217 ELYLHGNQLTSVPAEIGQLTSLTALSLYDNQLTSVPAEIGQIRSLVKLSLHGNRLTSLPA 276

Query: 236 EIITLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           EI  L+ L E                    L  L LH N+L ++P+EI  L  L ELSL 
Sbjct: 277 EIGQLRALVEFELDRNLLTSVPAEIGHLTSLTELSLHGNQLTSVPSEIGQLTSLGELSLS 336

Query: 277 DNPL 280
            N L
Sbjct: 337 GNQL 340



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 72/185 (38%), Positives = 97/185 (52%), Gaps = 12/185 (6%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LP ++  L +L+   L  N+L   P++I  + +L+ LYLG N L  VP EI +L  L  L
Sbjct: 44  LPAEIGQLASLESLELGYNELTSVPVEIWQLASLEGLYLGGNQLTSVPAEIGQLTSLEDL 103

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
           SL  N LT +P   G L  L  L L DNQL S+PA I  L  L  L L++N+L ++P EI
Sbjct: 104 SLEANRLTSVPTEIGQLTSLTQLDLRDNQLTSVPAEIWRLTSLTYLNLNDNQLTSVPAEI 163

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLE 297
             L  L E    L L  N L ++P EI  L  L +LS+ +N L        T  P  + +
Sbjct: 164 RQLTSLRE----LWLSANHLTSVPAEIWQLAALVKLSVTENQL--------TSVPAEIWQ 211

Query: 298 LASRT 302
           L S T
Sbjct: 212 LTSLT 216



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/184 (38%), Positives = 96/184 (52%), Gaps = 12/184 (6%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++P ++  L  L   NL GNQL   P +I  + +L+ L LG N L  VP EI +L  L  
Sbjct: 20  AVPAELGRLSALMDLNLGGNQLTLLPAEIGQLASLESLELGYNELTSVPVEIWQLASLEG 79

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L LGGN LT +P   G L  LE L L  N+L S+P  I  L  L  L L +N+L ++P E
Sbjct: 80  LYLGGNQLTSVPAEIGQLTSLEDLSLEANRLTSVPTEIGQLTSLTQLDLRDNQLTSVPAE 139

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
           I  L  L+     L L++N+L ++P EI  L  L EL L  N L        T  P  + 
Sbjct: 140 IWRLTSLT----YLNLNDNQLTSVPAEIRQLTSLRELWLSANHL--------TSVPAEIW 187

Query: 297 ELAS 300
           +LA+
Sbjct: 188 QLAA 191



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/155 (36%), Positives = 79/155 (50%), Gaps = 3/155 (1%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMS 123
            N L+  P    + T+L  L L  N++T +P  I     L+ L   +N LT  S+P ++ 
Sbjct: 199 ENQLTSVPAEIWQLTSLTELYLHGNQLTSVPAEIGQLTSLTALSLYDNQLT--SVPAEIG 256

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            +++L   +L GN+L   P +I  +  L    L  N L  VP EI  L  L  LSL GN 
Sbjct: 257 QIRSLVKLSLHGNRLTSLPAEIGQLRALVEFELDRNLLTSVPAEIGHLTSLTELSLHGNQ 316

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           LT +P   G L  L  L LS NQL S+PA++  L+
Sbjct: 317 LTSVPSEIGQLTSLGELSLSGNQLTSVPAAMRELE 351



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/183 (33%), Positives = 87/183 (47%), Gaps = 3/183 (1%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L  N+L+  P    +   L  L ++ N++T +P  I     L+ L    N LT  S+P
Sbjct: 172 LWLSANHLTSVPAEIWQLAALVKLSVTENQLTSVPAEIWQLTSLTELYLHGNQLT--SVP 229

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            ++  L +L   +L  NQL   P +I  I +L  L L  N L  +P EI +L  L    L
Sbjct: 230 AEIGQLTSLTALSLYDNQLTSVPAEIGQIRSLVKLSLHGNRLTSLPAEIGQLRALVEFEL 289

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N LT +P   G L  L  L L  NQL S+P+ I  L  L  L L  N+L ++P  +  
Sbjct: 290 DRNLLTSVPAEIGHLTSLTELSLHGNQLTSVPSEIGQLTSLGELSLSGNQLTSVPAAMRE 349

Query: 240 LKC 242
           L+ 
Sbjct: 350 LEA 352


>gi|418688836|ref|ZP_13249971.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400361994|gb|EJP17947.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 333

 Score =  124 bits (312), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 89/226 (39%), Positives = 122/226 (53%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+       +  NL+ LD  +N+IT L Q I     L  L   NN LT
Sbjct: 71  KNLQELNLDANQLTTILKEIEQLKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLT 130

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  LKNL+  NL  NQL   P +I  +  L+ LYL  N L  +P+EI +L KL
Sbjct: 131 --TLPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKL 188

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N L  +P     L  L+ L LS+NQL +LP  I  L+ L+ L L+ N+L T+P
Sbjct: 189 QELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIP 248

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L    + L+ L L  N+ +T+P E   LK L EL+L  N L
Sbjct: 249 NEIAQL----QNLQVLFLSYNQFKTIPVEFGQLKNLQELNLDANQL 290



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 112/203 (55%), Gaps = 9/203 (4%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLL 113
           +N+  L L +N L+  P    +  NL++L+L NN++  LP+ I     L  L ++ N L+
Sbjct: 117 QNLKVLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLM 176

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++  L+ L+  NL  NQL   P +I  +  L+ LYL  N L  +P+EI +L K
Sbjct: 177 T---LPKEIGQLEKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEK 233

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT IP+    L  L+ L LS NQ +++P     LK L+ L L  N+L T+
Sbjct: 234 LQKLYLNANQLTTIPNEIAQLQNLQVLFLSYNQFKTIPVEFGQLKNLQELNLDANQLTTI 293

Query: 234 PTEIITLKCLSEKLKSLLLHNNK 256
           P EI  L    + L++L L NN+
Sbjct: 294 PKEIGQL----QNLQTLYLRNNQ 312



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/166 (43%), Positives = 96/166 (57%), Gaps = 4/166 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++LPK +  LKNL+  NL  NQL     +I  +  L+ L  G+N +  + +EI +L  L 
Sbjct: 61  KALPKKIGQLKNLQELNLDANQLTTILKEIEQLKNLQVLDFGSNQITTLSQEIGQLQNLK 120

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           VL L  N LT +P   G L  L+ L L +NQL +LP  I+ LK L+ L L  N+L TLP 
Sbjct: 121 VLFLNNNQLTTLPKEIGQLKNLQTLNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPK 180

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           EI  L    EKL+ L L NN+L TLP EI  LK L EL L +N L+
Sbjct: 181 EIGQL----EKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLM 222



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 3/131 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E +  L L++N L   P   ++  NL+ L LS N++  LP+ I     L  L    N LT
Sbjct: 186 EKLQELNLWNNQLITLPKEIAQLKNLQELYLSENQLMTLPKEIGQLEKLQKLYLNANQLT 245

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             ++P +++ L+NL+V  LS NQ +  P++   +  L+ L L  N L  +P+EI +L  L
Sbjct: 246 --TIPNEIAQLQNLQVLFLSYNQFKTIPVEFGQLKNLQELNLDANQLTTIPKEIGQLQNL 303

Query: 175 HVLSLGGNSLT 185
             L L  N  +
Sbjct: 304 QTLYLRNNQFS 314



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 19/133 (14%)

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           IN  CK+    +   +  D+     +   +  L LS+ +L++LP  I  LK L+ L L  
Sbjct: 21  INLSCKIQAEEVEPEAYQDLTKALQNPLDVRVLDLSEQKLKALPKKIGQLKNLQELNLDA 80

Query: 228 NKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLK 268
           N+L T+  EI  LK L                    + LK L L+NN+L TLP EI  LK
Sbjct: 81  NQLTTILKEIEQLKNLQVLDFGSNQITTLSQEIGQLQNLKVLFLNNNQLTTLPKEIGQLK 140

Query: 269 CLSELSLRDNPLV 281
            L  L+L +N L+
Sbjct: 141 NLQTLNLWNNQLI 153



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 60/125 (48%), Gaps = 7/125 (5%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L   P    +   L+ L L+ N++T +P  I     L  L    N   
Sbjct: 209 KNLQELYLSENQLMTLPKEIGQLEKLQKLYLNANQLTTIPNEIAQLQNLQVLFLSYN--Q 266

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INKL-- 171
            +++P +   LKNL+  NL  NQL   P +I  +  L+ LYL NN  +   +E I KL  
Sbjct: 267 FKTIPVEFGQLKNLQELNLDANQLTTIPKEIGQLQNLQTLYLRNNQFSIEEKERIRKLLP 326

Query: 172 -CKLH 175
            C+++
Sbjct: 327 KCQIY 331


>gi|434403391|ref|YP_007146276.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
           stagnale PCC 7417]
 gi|428257646|gb|AFZ23596.1| Leucine Rich Repeat (LRR)-containing protein [Cylindrospermum
           stagnale PCC 7417]
          Length = 938

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 100/272 (36%), Positives = 140/272 (51%), Gaps = 10/272 (3%)

Query: 11  SDSSDSDSFKTVSIKTLDFSYSSLDSETLA-TQIELLPNNDYNKKPENIDTLLLYHNNLS 69
           +D    D  K   I    F+ + L+   L+  ++  LP  D   K +N+ TL L HN ++
Sbjct: 27  NDWGTPDKDKLTEIPAEVFALTWLEELDLSRNEMTTLP--DAIAKLQNLSTLYLSHNGIT 84

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNL 128
             PD  ++  NL SLDLS N IT LP AI     L+TL    N +T  +LP  ++ L NL
Sbjct: 85  TLPDAIAQLQNLNSLDLSYNGITTLPDAIAKLHNLTTLNLSVNKIT--TLPDAIAKLHNL 142

Query: 129 KVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
              NLS N++   P  I  +  L  L L  N +  +P  I KL  L  L L GN +T +P
Sbjct: 143 TTLNLSVNRIRTLPDAIAKLHNLTSLNLNGNRITTLPDAIAKLHNLTSLDLSGNRITTLP 202

Query: 189 DTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLK 248
           D    L+ L +L L +N + +LP +I+ L  L SL L  N++ TLP  I  L+ LS    
Sbjct: 203 DAIAKLHNLTSLSLWNNGITTLPDAIAKLHNLTSLDLSGNRITTLPDAIAKLQNLS---- 258

Query: 249 SLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +L L  N++ TLP  I  L  L+ L LR NP+
Sbjct: 259 TLDLRGNEITTLPDAIAQLHNLTSLDLRRNPI 290



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 65/132 (49%), Gaps = 5/132 (3%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
             +I  LP  D   K  N+ +L L  N ++  PD  +K  NL SL L NN IT LP AI 
Sbjct: 172 GNRITTLP--DAIAKLHNLTSLDLSGNRITTLPDAIAKLHNLTSLSLWNNGITTLPDAIA 229

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L++L    N +T  +LP  ++ L+NL   +L GN++   P  I  +  L  L L  
Sbjct: 230 KLHNLTSLDLSGNRIT--TLPDAIAKLQNLSTLDLRGNEITTLPDAIAQLHNLTSLDLRR 287

Query: 159 NSLNHVPREINK 170
           N +   P E+ K
Sbjct: 288 NPIEKPPLEVVK 299


>gi|455791564|gb|EMF43371.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 452

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 88/227 (38%), Positives = 126/227 (55%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L    L+  P    +  NL++L+L +N++T LP+ I     L  L+ R N +T
Sbjct: 163 QNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRIT 222

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  LPK++  L+NL+  +L  NQL   P +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 223 A--LPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNL 280

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L+ L L +NQL +LP  I  L+ L+ L L NN+L TLP
Sbjct: 281 QRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNLRVLDLDNNQLTTLP 340

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            E++ L+     L+ L L +N+L TLP EI  L+ L  L L  N L 
Sbjct: 341 KEVLRLQS----LQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLT 383



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 107/319 (33%), Positives = 149/319 (46%), Gaps = 46/319 (14%)

Query: 3   YNYGSSSSSDSSDSDSFKTVS----IKTLDFSYSSLDSETLATQIELLPN--------ND 50
           Y   +  S   + +D  K +     ++TLD  Y  L    L  +I  L N        N 
Sbjct: 25  YELQAEESESGTYTDLAKALQNPLKVRTLDLRYQKLT--ILPKEIGQLRNLQELDLSFNS 82

Query: 51  YNKKP------ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI------ 98
               P      EN+  L L+ N L+  P    +  NL+ LDL++N++T LP+ I      
Sbjct: 83  LTTLPKEVGQLENLQRLDLHQNRLATLPMEIGQLKNLQELDLNSNKLTTLPKEIRQLRNL 142

Query: 99  ----------TNFPLSTLIARN----NLLTAE--SLPKDMSNLKNLKVFNLSGNQLEQFP 142
                     T  P      +N    NL+  +  +LPK++  L+NLK  NL  NQL   P
Sbjct: 143 QELDLHRNQLTTLPKEIGQLQNLKTLNLIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLP 202

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
            +I ++  L+ L L  N +  +P+EI +L  L  L L  N LT +P   G L  L+ L L
Sbjct: 203 KEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDL 262

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
             NQL +LP  I  L+ L+ L LH N+L TLP EI  L+ L E    L L  N+L TLP 
Sbjct: 263 HQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQE----LCLDENQLTTLPK 318

Query: 263 EIITLKCLSELSLRDNPLV 281
           EI  L+ L  L L +N L 
Sbjct: 319 EIEQLQNLRVLDLDNNQLT 337



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 89/226 (39%), Positives = 122/226 (53%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L+L  N ++  P    +  NL+ LDL  N++T LP+ I     L  L    N LT
Sbjct: 209 QNLEILVLRENRITALPKEIGQLQNLQWLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLT 268

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+  +L  NQL   P +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 269 --TLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQLQNL 326

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N LT +P     L  L+ L L  N+L +LP  I  L+ L+ L L +N+L TLP
Sbjct: 327 RVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLISNQLTTLP 386

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L+ L E    L L  N+L T P EI  LK L EL L  NPL
Sbjct: 387 KEIGQLQNLQE----LCLDENQLTTFPKEIRQLKNLQELHLYLNPL 428



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/178 (32%), Positives = 83/178 (46%), Gaps = 26/178 (14%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L+ N L+  P    +  NL+ LDL  N++T LP+ I     L  L    N LT
Sbjct: 255 QNLQRLDLHQNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLT 314

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN--------------- 159
             +LPK++  L+NL+V +L  NQL   P ++L + +L+ L LG+N               
Sbjct: 315 --TLPKEIEQLQNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNL 372

Query: 160 --------SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
                    L  +P+EI +L  L  L L  N LT  P     L  L+ L L  N L S
Sbjct: 373 QVLGLISNQLTTLPKEIGQLQNLQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSS 430


>gi|417764090|ref|ZP_12412063.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400353922|gb|EJP06075.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 356

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 105/284 (36%), Positives = 142/284 (50%), Gaps = 22/284 (7%)

Query: 3   YNYGSSSSSDSSDSDSFKTVS----IKTLDFSYSSLDSETLATQIELLPNNDYNKKPENI 58
           Y   +  S   + +D  K +     ++TLD S +    +TL  +I          K +N+
Sbjct: 25  YELQAEESESGTYTDLAKALQNPLKVRTLDLSANRF--KTLPKEI---------GKLKNL 73

Query: 59  DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAES 117
             L L  N L+  P    +  NLR L+LS N+I  +P+ I     L  L    N LT  +
Sbjct: 74  QELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQWLYLPKNQLT--T 131

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LP+++  LKNLK  NLS NQ++  P +I  +  L+ L L NN L  +P+EI +L  L  L
Sbjct: 132 LPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSL 191

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            L  N LT +P   G L  L+ L L  NQL  LP  I  LK L++L L NN+L TL  EI
Sbjct: 192 DLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEI 251

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             L    + LKSL L +N+L   P EI  LK L  L L  N L 
Sbjct: 252 EQL----QNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLT 291



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/229 (38%), Positives = 121/229 (52%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P  + TL L  N     P    K  NL+ L+L+ N++T LP+ I     L  L    N  
Sbjct: 47  PLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSAN-- 104

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
             +++PK++  L+ L+   L  NQL   P +I  +  LK L L  N +  +P+EI KL K
Sbjct: 105 QIKTIPKEIEKLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQK 164

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P   G L  L++L LS N+L +LP  I +L+ L+ L L +N+L  L
Sbjct: 165 LQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTIL 224

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK     L++L L NN+L TL  EI  L+ L  L LR N L I
Sbjct: 225 PNEIGQLK----NLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTI 269



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/209 (38%), Positives = 116/209 (55%), Gaps = 14/209 (6%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           ++K+L+ SY+ +  +T+  +IE         K + + +L L +N L+  P    +  NL+
Sbjct: 141 NLKSLNLSYNQI--KTIPKEIE---------KLQKLQSLGLDNNQLTTLPQEIGQLQNLQ 189

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           SLDLS NR+T LPQ I +   L  L   +N LT   LP ++  LKNL+  NL  N+L   
Sbjct: 190 SLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTI--LPNEIGQLKNLQTLNLRNNRLTTL 247

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
             +I  +  LK L L +N L   P+EI +L  L VL LG N LT +P+  G L  L+ L 
Sbjct: 248 SKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLD 307

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  NQL +LP  I  L+ L+ L L+NN+L
Sbjct: 308 LDSNQLTTLPQEIGQLQNLQELFLNNNQL 336



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 83/215 (38%), Positives = 113/215 (52%), Gaps = 31/215 (14%)

Query: 71  FPDNASKFTN---LRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKN 127
           + D A    N   +R+LDLS NR                         ++LPK++  LKN
Sbjct: 37  YTDLAKALQNPLKVRTLDLSANRF------------------------KTLPKEIGKLKN 72

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           L+  NL+ NQL   P +I  +  L+ L L  N +  +P+EI KL KL  L L  N LT +
Sbjct: 73  LQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQWLYLPKNQLTTL 132

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
           P   G L  L++L LS NQ++++P  I  L+ L+SL L NN+L TLP EI  L    + L
Sbjct: 133 PQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQL----QNL 188

Query: 248 KSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           +SL L  N+L TLP EI  L+ L +L L  N L I
Sbjct: 189 QSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTI 223



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/219 (38%), Positives = 115/219 (52%), Gaps = 13/219 (5%)

Query: 46  LPNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           LP N     P+      N+ +L L +N +   P    K   L+SL L NN++T LPQ I 
Sbjct: 124 LPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIG 183

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L +L    N LT  +LP+++ +L+NL+   L  NQL   P +I  +  L+ L L N
Sbjct: 184 QLQNLQSLDLSTNRLT--TLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRN 241

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  + +EI +L  L  L L  N LT  P   G L  L+ L L  NQL +LP  I  LK
Sbjct: 242 NRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLK 301

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
            L++L L +N+L TLP EI  L+ L E    L L+NN+L
Sbjct: 302 NLQTLDLDSNQLTTLPQEIGQLQNLQE----LFLNNNQL 336


>gi|410956147|ref|XP_003984706.1| PREDICTED: LOW QUALITY PROTEIN: malignant fibrous
           histiocytoma-amplified sequence 1 [Felis catus]
          Length = 1222

 Score =  124 bits (312), Expect = 6e-26,   Method: Composition-based stats.
 Identities = 84/243 (34%), Positives = 121/243 (49%), Gaps = 26/243 (10%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTA---- 115
           L L HN L   P       +L  LD+S NR+ HLP +++  F L TL   +N LTA    
Sbjct: 320 LNLSHNQLPALPAQXGALAHLEELDVSFNRLAHLPDSLSCLFRLRTLDVDHNQLTAFPRQ 379

Query: 116 -----------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
                              LP+D+S L+ LK+  LSG +L   P    ++ +L+ L L N
Sbjct: 380 LLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDN 439

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P + ++L +L +L+L  N   + P     L  LE L LS NQL S+P+ IS L 
Sbjct: 440 NGLQALPAQFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLG 499

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L +L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DN
Sbjct: 500 RLLTLWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDNFGQLSRVGLWKIKDN 555

Query: 279 PLV 281
           PL+
Sbjct: 556 PLI 558



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Composition-based stats.
 Identities = 82/225 (36%), Positives = 112/225 (49%), Gaps = 8/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +I+ L L +N L   PD   S   +LR L L  NR   LP A+      L+ L   +N L
Sbjct: 244 DIEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 303

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA    + +S L+ L+  NLS NQL   P Q   +  L+ L +  N L H+P  ++ L +
Sbjct: 304 TALG-AEVVSALRELRKLNLSHNQLPALPAQXGALAHLEELDVSFNRLAHLPDSLSCLFR 362

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L +  N LT  P     L  LE L +S N+L  LP  IS L+ LK L L   +L TL
Sbjct: 363 LRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 422

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P+      C    L+SL+L NN L+ LP +   L+ L  L+L  N
Sbjct: 423 PSGF----CELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSN 463



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Composition-based stats.
 Identities = 66/202 (32%), Positives = 95/202 (47%), Gaps = 26/202 (12%)

Query: 60  TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF------------------ 101
           TL + HN L+ FP    +   L  LD+S+NR+  LP+ I+                    
Sbjct: 365 TLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPS 424

Query: 102 ------PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLY 155
                  L +L+  NN L A  LP   S L+ LK+ NLS N  E+FP  +L +  L+ LY
Sbjct: 425 GFCELASLESLMLDNNGLQA--LPAQFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELY 482

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           L  N L  VP  I+ L +L  L L  N +  +PD+  +L  LE L+L  NQ+  LP +  
Sbjct: 483 LSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPDNFG 542

Query: 216 NLKMLKSLLLHNNKLRTLPTEI 237
            L  +    + +N L   P E+
Sbjct: 543 QLSRVGLWKIKDNPLIQPPYEV 564



 Score = 51.2 bits (121), Expect = 0.001,   Method: Composition-based stats.
 Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 5/109 (4%)

Query: 174 LHVLSLGGNSLTDIPDTFGD-LYQLEALILSDNQLESLPASISNL-KMLKSLLLHNNKLR 231
           + VL+LG N L ++PD  G  L  L  L+L  N+   LP +++ L   L  L + +N+L 
Sbjct: 245 IEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 304

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            L  E+++   L E L+ L L +N+L  LP +   L  L EL +  N L
Sbjct: 305 ALGAEVVS--ALRE-LRKLNLSHNQLPALPAQXGALAHLEELDVSFNRL 350



 Score = 48.9 bits (115), Expect = 0.004,   Method: Composition-based stats.
 Identities = 49/143 (34%), Positives = 67/143 (46%), Gaps = 10/143 (6%)

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREI-NKLCKLHVLSLGGNSLTDIPDTFGDL-YQLE 198
            P  I DI  L    LGNN L  VP  + + L  L VL L  N    +P    +L + L 
Sbjct: 238 LPANIGDIEVLN---LGNNGLEEVPDGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLT 294

Query: 199 ALILSDNQLESLPAS-ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
            L +S N+L +L A  +S L+ L+ L L +N+L  LP +   L  L E    L +  N+L
Sbjct: 295 ELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQXGALAHLEE----LDVSFNRL 350

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
             LP  +  L  L  L +  N L
Sbjct: 351 AHLPDSLSCLFRLRTLDVDHNQL 373



 Score = 38.5 bits (88), Expect = 6.1,   Method: Composition-based stats.
 Identities = 26/89 (29%), Positives = 42/89 (47%), Gaps = 3/89 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           ++ L L  N L+  P   S    L +L L NNRI +LP +I     L  L+ + N +   
Sbjct: 478 LEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAV- 536

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQI 145
            LP +   L  + ++ +  N L Q P ++
Sbjct: 537 -LPDNFGQLSRVGLWKIKDNPLIQPPYEV 564


>gi|255082904|ref|XP_002504438.1| predicted protein [Micromonas sp. RCC299]
 gi|226519706|gb|ACO65696.1| predicted protein [Micromonas sp. RCC299]
          Length = 487

 Score =  124 bits (312), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 89/243 (36%), Positives = 124/243 (51%), Gaps = 21/243 (8%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPL-STLIARNNLLTA 115
           +++ L +  N L+  P    + T+LR L L +NR+T LP  I    L   L   +N LT 
Sbjct: 183 SLEKLYVADNQLTSMPAEIWRLTSLRELYLEDNRLTSLPAEIGQLALLKELWLNDNELTG 242

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP ++  L +L+   L GNQL   P +I  + +L+ LYL  N L  VP EI +L  L 
Sbjct: 243 --LPAEIGQLTSLRGLYLYGNQLTSVPAEIGQLMSLRELYLQGNQLTSVPAEIGQLTSLD 300

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           VL+L GN LT +P   G L  L  L LS N L SLPA I  L  L+ L L +N+L ++P 
Sbjct: 301 VLNLSGNQLTSVPAEIGQLTFLGCLDLSYNYLTSLPAEIGQLMSLRLLDLDDNRLASVPA 360

Query: 236 EIITLKCLSE------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRD 277
           EI  L+ L E                   ++ L L NN+L ++P E+  L  L +L+L  
Sbjct: 361 EIGQLRSLRELFLNGNLLTSVPAEIGQLTVRELYLENNQLTSVPAEVGQLAALEQLNLSR 420

Query: 278 NPL 280
           N L
Sbjct: 421 NKL 423



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/240 (35%), Positives = 115/240 (47%), Gaps = 22/240 (9%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L+  P    +  +L  L L +N++T +P  I     L  L    N LT  S+P
Sbjct: 49  LYLEDNQLTSLPAEIGQLASLEWLCLIDNQLTSVPAEIGQLASLDGLYLGKNQLT--SVP 106

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            ++  L +L +  L  NQL   P +I  +  LK L L  N L  VP E+ +L  L  L L
Sbjct: 107 AEIGQLTSLGLLGLDNNQLSSVPAEIGRLTALKGLDLQKNQLTSVPAEVGQLTSLEALRL 166

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N LT +P   G L  LE L ++DNQL S+PA I  L  L+ L L +N+L +LP EI  
Sbjct: 167 QHNRLTSVPAEIGQLASLEKLYVADNQLTSMPAEIWRLTSLRELYLEDNRLTSLPAEIGQ 226

Query: 240 LKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L  L E                    L+ L L+ N+L ++P EI  L  L EL L+ N L
Sbjct: 227 LALLKELWLNDNELTGLPAEIGQLTSLRGLYLYGNQLTSVPAEIGQLMSLRELYLQGNQL 286



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 111/217 (51%), Gaps = 7/217 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L +N LS  P    + T L+ LDL  N++T +P  +     L  L  ++N LT  S+P +
Sbjct: 120 LDNNQLSSVPAEIGRLTALKGLDLQKNQLTSVPAEVGQLTSLEALRLQHNRLT--SVPAE 177

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L +L+   ++ NQL   P +I  + +L+ LYL +N L  +P EI +L  L  L L  
Sbjct: 178 IGQLASLEKLYVADNQLTSMPAEIWRLTSLRELYLEDNRLTSLPAEIGQLALLKELWLND 237

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N LT +P   G L  L  L L  NQL S+PA I  L  L+ L L  N+L ++P EI  L 
Sbjct: 238 NELTGLPAEIGQLTSLRGLYLYGNQLTSVPAEIGQLMSLRELYLQGNQLTSVPAEIGQLT 297

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
                L  L L  N+L ++P EI  L  L  L L  N
Sbjct: 298 ----SLDVLNLSGNQLTSVPAEIGQLTFLGCLDLSYN 330



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/198 (38%), Positives = 107/198 (54%), Gaps = 7/198 (3%)

Query: 84  LDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
           L+LS N++T +P  I     L  L   +N LT  S+P ++  L +L    L  NQL   P
Sbjct: 3   LNLSGNQLTSVPAEIGQLTSLERLCLNDNQLT--SVPAEIGRLASLTELYLEDNQLTSLP 60

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
            +I  + +L++L L +N L  VP EI +L  L  L LG N LT +P   G L  L  L L
Sbjct: 61  AEIGQLASLEWLCLIDNQLTSVPAEIGQLASLDGLYLGKNQLTSVPAEIGQLTSLGLLGL 120

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
            +NQL S+PA I  L  LK L L  N+L ++P E+  L      L++L L +N+L ++P 
Sbjct: 121 DNNQLSSVPAEIGRLTALKGLDLQKNQLTSVPAEVGQLT----SLEALRLQHNRLTSVPA 176

Query: 263 EIITLKCLSELSLRDNPL 280
           EI  L  L +L + DN L
Sbjct: 177 EIGQLASLEKLYVADNQL 194



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 87/252 (34%), Positives = 120/252 (47%), Gaps = 24/252 (9%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L  N L+  P    + T+LR L L  N++T +P  I     L  L  + N LT  S+P
Sbjct: 233 LWLNDNELTGLPAEIGQLTSLRGLYLYGNQLTSVPAEIGQLMSLRELYLQGNQLT--SVP 290

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            ++  L +L V NLSGNQL   P +I  +  L  L L  N L  +P EI +L  L +L L
Sbjct: 291 AEIGQLTSLDVLNLSGNQLTSVPAEIGQLTFLGCLDLSYNYLTSLPAEIGQLMSLRLLDL 350

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +P   G L  L  L L+ N L S+PA I  L + + L L NN+L ++P E+  
Sbjct: 351 DDNRLASVPAEIGQLRSLRELFLNGNLLTSVPAEIGQLTV-RELYLENNQLTSVPAEVGQ 409

Query: 240 LKCLSE------KLKSL-------------LLHNNKLRTLPTEIITLKCLSELSLRDN-P 279
           L  L +      KL S+             LL+ N+L ++P EI  L  L  L L    P
Sbjct: 410 LAALEQLNLSRNKLTSVPAEIGLLTSLRWLLLNGNQLTSVPGEIGQLTSLRLLFLSSGEP 469

Query: 280 LVIRFVSDMTYK 291
             IR + +   K
Sbjct: 470 AAIRKLREAGCK 481



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 66/151 (43%), Positives = 81/151 (53%), Gaps = 4/151 (2%)

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
           V NLSGNQL   P +I  + +L+ L L +N L  VP EI +L  L  L L  N LT +P 
Sbjct: 2   VLNLSGNQLTSVPAEIGQLTSLERLCLNDNQLTSVPAEIGRLASLTELYLEDNQLTSLPA 61

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
             G L  LE L L DNQL S+PA I  L  L  L L  N+L ++P EI  L  L      
Sbjct: 62  EIGQLASLEWLCLIDNQLTSVPAEIGQLASLDGLYLGKNQLTSVPAEIGQLTSLG----L 117

Query: 250 LLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L L NN+L ++P EI  L  L  L L+ N L
Sbjct: 118 LGLDNNQLSSVPAEIGRLTALKGLDLQKNQL 148



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 73/203 (35%), Positives = 103/203 (50%), Gaps = 10/203 (4%)

Query: 48  NNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
            N     P  I  L+      L  N L+  P    + T+L  L+LS N++T +P  I   
Sbjct: 260 GNQLTSVPAEIGQLMSLRELYLQGNQLTSVPAEIGQLTSLDVLNLSGNQLTSVPAEIGQL 319

Query: 102 P-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
             L  L    N LT  SLP ++  L +L++ +L  N+L   P +I  + +L+ L+L  N 
Sbjct: 320 TFLGCLDLSYNYLT--SLPAEIGQLMSLRLLDLDDNRLASVPAEIGQLRSLRELFLNGNL 377

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  VP EI +L  +  L L  N LT +P   G L  LE L LS N+L S+PA I  L  L
Sbjct: 378 LTSVPAEIGQLT-VRELYLENNQLTSVPAEVGQLAALEQLNLSRNKLTSVPAEIGLLTSL 436

Query: 221 KSLLLHNNKLRTLPTEIITLKCL 243
           + LLL+ N+L ++P EI  L  L
Sbjct: 437 RWLLLNGNQLTSVPGEIGQLTSL 459



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/174 (36%), Positives = 91/174 (52%), Gaps = 4/174 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           ++D L L  N L+  P    + T L  LDLS N +T LP  I     L  L   +N L  
Sbjct: 298 SLDVLNLSGNQLTSVPAEIGQLTFLGCLDLSYNYLTSLPAEIGQLMSLRLLDLDDNRLA- 356

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            S+P ++  L++L+   L+GN L   P +I  + T++ LYL NN L  VP E+ +L  L 
Sbjct: 357 -SVPAEIGQLRSLRELFLNGNLLTSVPAEIGQL-TVRELYLENNQLTSVPAEVGQLAALE 414

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
            L+L  N LT +P   G L  L  L+L+ NQL S+P  I  L  L+ L L + +
Sbjct: 415 QLNLSRNKLTSVPAEIGLLTSLRWLLLNGNQLTSVPGEIGQLTSLRLLFLSSGE 468


>gi|427735457|ref|YP_007055001.1| hypothetical protein Riv7116_1913 [Rivularia sp. PCC 7116]
 gi|427370498|gb|AFY54454.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 955

 Score =  124 bits (312), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 92/224 (41%), Positives = 125/224 (55%), Gaps = 7/224 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           + +L L HN LS  P    + T L+SLDLS N+++ LP  I     L +L   +N L+  
Sbjct: 101 LQSLNLSHNRLSSLPAEIGQLTKLQSLDLSFNQLSSLPAEIGQLAKLQSLNLSHNRLS-- 158

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           SLP ++  L  L+  +L  NQL   P +I  +  L+ L L NN L+ +P EI +L KL  
Sbjct: 159 SLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTKLQT 218

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L+ +P   G L  L+ L LS N+L SLPA I  L  L+ L L +NKL +LP E
Sbjct: 219 LDLYNNQLSSLPAEIGQLTNLQFLHLSHNKLSSLPAEIVQLTNLQFLHLSHNKLSSLPAE 278

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I+ L      L+SL L +NKL +LP EI  L  L  L+L+ N L
Sbjct: 279 IVQLT----NLQSLDLSHNKLSSLPAEIGQLTKLQFLNLKGNQL 318



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/219 (40%), Positives = 120/219 (54%), Gaps = 7/219 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           +  N LS  P    +   L+SL+LS+NR++ LP  I     L +L    N L+  SLP +
Sbjct: 83  IVRNKLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQSLDLSFNQLS--SLPAE 140

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L  L+  NLS N+L   P +I  +  L+ L L NN L+ +P EI +L KL  L L  
Sbjct: 141 IGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTKLQTLDLYN 200

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L+ +P   G L +L+ L L +NQL SLPA I  L  L+ L L +NKL +LP EI+ L 
Sbjct: 201 NQLSSLPAEIGQLTKLQTLDLYNNQLSSLPAEIGQLTNLQFLHLSHNKLSSLPAEIVQLT 260

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
                L+ L L +NKL +LP EI+ L  L  L L  N L
Sbjct: 261 ----NLQFLHLSHNKLSSLPAEIVQLTNLQSLDLSHNKL 295



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/245 (37%), Positives = 131/245 (53%), Gaps = 19/245 (7%)

Query: 24  IKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRS 83
           +++LD S++ L S  L  +I  L           + +L L HN LS  P    + T L++
Sbjct: 124 LQSLDLSFNQLSS--LPAEIGQLAK---------LQSLNLSHNRLSSLPAEIGQLTKLQT 172

Query: 84  LDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
           LDL NN+++ LP  I     L TL   NN L+  SLP ++  L  L+  +L  NQL   P
Sbjct: 173 LDLYNNQLSSLPAEIGQLTKLQTLDLYNNQLS--SLPAEIGQLTKLQTLDLYNNQLSSLP 230

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
            +I  +  L++L+L +N L+ +P EI +L  L  L L  N L+ +P     L  L++L L
Sbjct: 231 AEIGQLTNLQFLHLSHNKLSSLPAEIVQLTNLQFLHLSHNKLSSLPAEIVQLTNLQSLDL 290

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL-KCLSEKLKSLLLHNNKLRTLP 261
           S N+L SLPA I  L  L+ L L  N+L +LPTEI  L  CL E    L L +N L + P
Sbjct: 291 SHNKLSSLPAEIGQLTKLQFLNLKGNQLNSLPTEIGHLYSCLRE----LKLDSNLLESPP 346

Query: 262 TEIIT 266
            EI++
Sbjct: 347 PEILS 351



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 74/198 (37%), Positives = 105/198 (53%), Gaps = 14/198 (7%)

Query: 83  SLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
            LDLS N +T LP  I       L     L+  +    D       ++    GN+L + P
Sbjct: 20  GLDLSGNELTVLPPEI-----GKLTQLKRLILGKYRYDDKG-----RIVGTIGNKLSKLP 69

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
            +I  +  L+  ++  N L+ +P EI +L KL  L+L  N L+ +P   G L +L++L L
Sbjct: 70  REIGLLAQLEEFHIVRNKLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLTKLQSLDL 129

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
           S NQL SLPA I  L  L+SL L +N+L +LP EI  L     KL++L L+NN+L +LP 
Sbjct: 130 SFNQLSSLPAEIGQLAKLQSLNLSHNRLSSLPAEIGQLT----KLQTLDLYNNQLSSLPA 185

Query: 263 EIITLKCLSELSLRDNPL 280
           EI  L  L  L L +N L
Sbjct: 186 EIGQLTKLQTLDLYNNQL 203


>gi|418678217|ref|ZP_13239491.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400321407|gb|EJO69267.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 377

 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 95/242 (39%), Positives = 129/242 (53%), Gaps = 9/242 (3%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           + Q+  LPN     K  N+  L L HN     P    +  NL++L+L  N++T LP  I 
Sbjct: 124 SNQLTTLPNEIGQLK--NLRVLELTHNQFKTIPKEIGQLKNLQTLNLGYNQLTALPNEIG 181

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L +L   +N LTA  LP ++  L+NL+   LS N+L   P +I  +  L+ LYLG+
Sbjct: 182 QLKNLQSLYLGSNQLTA--LPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGS 239

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P EI +L  L  L L  N  T +P   G L  L+ L L+ NQL++LP  I  L+
Sbjct: 240 NQLTILPNEIGQLKNLQTLYLRYNQFTTLPKEIGKLQNLQRLELNYNQLKTLPKGIGQLQ 299

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+ L L  N+   LP EI  LK L E    L L +N+L T+P EI  L+ L EL LRDN
Sbjct: 300 NLQWLDLGYNQFTILPEEIGKLKNLQE----LYLRDNQLTTIPEEIGQLQNLQELYLRDN 355

Query: 279 PL 280
            L
Sbjct: 356 QL 357



 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 125/228 (54%), Gaps = 7/228 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L  N L+  P    +  NLR L+L +N+ T LP+ +     L  L   +N 
Sbjct: 67  KLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNQ 126

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP ++  LKNL+V  L+ NQ +  P +I  +  L+ L LG N L  +P EI +L 
Sbjct: 127 LT--TLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGYNQLTALPNEIGQLK 184

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L LG N LT +P+  G L  L++L LS N+L +LP  I  L+ L+SL L +N+L  
Sbjct: 185 NLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNQLTI 244

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           LP EI  LK     L++L L  N+  TLP EI  L+ L  L L  N L
Sbjct: 245 LPNEIGQLK----NLQTLYLRYNQFTTLPKEIGKLQNLQRLELNYNQL 288



 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/246 (37%), Positives = 123/246 (50%), Gaps = 22/246 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N  +  P    K  NL+ L L +N++T LP  I     L  L   +N   
Sbjct: 92  KNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHN--Q 149

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            +++PK++  LKNL+  NL  NQL   P +I  +  L+ LYLG+N L  +P EI +L  L
Sbjct: 150 FKTIPKEIGQLKNLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNL 209

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P+  G L  L++L L  NQL  LP  I  LK L++L L  N+  TLP
Sbjct: 210 QSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNQLTILPNEIGQLKNLQTLYLRYNQFTTLP 269

Query: 235 TEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            EI  L+ L                    + L+ L L  N+   LP EI  LK L EL L
Sbjct: 270 KEIGKLQNLQRLELNYNQLKTLPKGIGQLQNLQWLDLGYNQFTILPEEIGKLKNLQELYL 329

Query: 276 RDNPLV 281
           RDN L 
Sbjct: 330 RDNQLT 335



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 89/227 (39%), Positives = 122/227 (53%), Gaps = 7/227 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           + P ++  L L  N     P    K  NL+ L+L+ N++T LP+ I     L  L   +N
Sbjct: 43  QNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDN 102

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
             T   LPK++  L+NLK   L  NQL   P +I  +  L+ L L +N    +P+EI +L
Sbjct: 103 QFTI--LPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQL 160

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L+LG N LT +P+  G L  L++L L  NQL +LP  I  L+ L+SL L  N+L 
Sbjct: 161 KNLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLT 220

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           TLP EI  L    + L+SL L +N+L  LP EI  LK L  L LR N
Sbjct: 221 TLPNEIGQL----QNLQSLYLGSNQLTILPNEIGQLKNLQTLYLRYN 263



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/204 (42%), Positives = 109/204 (53%), Gaps = 7/204 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           ++R L+LS NR   LP+ I     L  L    N LT   LPK++  LKNL+  NL  NQ 
Sbjct: 47  DVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTI--LPKEIGQLKNLRKLNLYDNQF 104

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
              P ++  +  LK LYLG+N L  +P EI +L  L VL L  N    IP   G L  L+
Sbjct: 105 TILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQ 164

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L L  NQL +LP  I  LK L+SL L +N+L  LP EI  L    + L+SL L  N+L 
Sbjct: 165 TLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQL----QNLQSLYLSTNRLT 220

Query: 259 TLPTEIITLKCLSELSLRDNPLVI 282
           TLP EI  L+ L  L L  N L I
Sbjct: 221 TLPNEIGQLQNLQSLYLGSNQLTI 244



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 79/211 (37%), Positives = 110/211 (52%), Gaps = 7/211 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L +N L+  P+   +  NL+SL L +N++T LP  I     L +L    N LT
Sbjct: 161 KNLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLT 220

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  L+NL+   L  NQL   P +I  +  L+ LYL  N    +P+EI KL  L
Sbjct: 221 --TLPNEIGQLQNLQSLYLGSNQLTILPNEIGQLKNLQTLYLRYNQFTTLPKEIGKLQNL 278

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P   G L  L+ L L  NQ   LP  I  LK L+ L L +N+L T+P
Sbjct: 279 QRLELNYNQLKTLPKGIGQLQNLQWLDLGYNQFTILPEEIGKLKNLQELYLRDNQLTTIP 338

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
            EI  L+ L E    L L +N+L +   E I
Sbjct: 339 EEIGQLQNLQE----LYLRDNQLSSEEKERI 365



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 88/168 (52%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLS N+ +  P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 34  TYRDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N  T +P     L  L+ L L  NQL +LP  I  LK L+ L L +N+ +T+
Sbjct: 94  LRKLNLYDNQFTILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTI 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  LK     L++L L  N+L  LP EI  LK L  L L  N L 
Sbjct: 154 PKEIGQLK----NLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLT 197


>gi|417770632|ref|ZP_12418538.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418680646|ref|ZP_13241890.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327590|gb|EJO79835.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409947404|gb|EKN97402.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455665927|gb|EMF31409.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 333

 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 111/316 (35%), Positives = 159/316 (50%), Gaps = 32/316 (10%)

Query: 27  LDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           LD    +L S+ L T    LP     K+ +N+ +L L +N     P    +  NL+ L+L
Sbjct: 48  LDVRVLNLSSQKLTT----LPKEI--KQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNL 101

Query: 87  SNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI 145
            NN++ +LP+ I     L TLI   N LT  + P+++  LKNL+  NL  NQL     +I
Sbjct: 102 WNNQLKNLPKEIGQLQNLQTLILSVNRLT--TFPQEIGQLKNLQKLNLDYNQLTTLLQEI 159

Query: 146 LDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDN 205
             + +L+ L L  N L  +P EI +L  L  L L  N LT +P+  G L  L+ALIL DN
Sbjct: 160 GQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDN 219

Query: 206 QLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
           QL  LP  I  L+ LK L   NN+L TLP EI  L    E L+ L L++N+L TLP EI 
Sbjct: 220 QLTILPKEIGQLQNLKLLYSVNNELTTLPKEIGQL----ENLQELYLNDNQLTTLPKEIG 275

Query: 266 TLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELAS-RTLKVHEIDYSQEHLPQNLVQYLE 324
            LK L           I F + +T  P  + +L + + LK++    S +          E
Sbjct: 276 QLKNLQTF--------ISFNNQLTMLPQEIGQLQNLQWLKLNNNQLSSQE---------E 318

Query: 325 SAHHCVNPKCKGVFFD 340
                + PKC+ ++F+
Sbjct: 319 ERIQKLLPKCQ-IYFE 333



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 92/230 (40%), Positives = 126/230 (54%), Gaps = 7/230 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K P ++  L L    L+  P    +  NL+SLDL+NN+   LP+ I     L  L   NN
Sbjct: 45  KNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNN 104

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            L  ++LPK++  L+NL+   LS N+L  FP +I  +  L+ L L  N L  + +EI +L
Sbjct: 105 QL--KNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQL 162

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L+L  N L  +P+  G L  L+ L LS+NQL  LP  I  LK L++L+L +N+L 
Sbjct: 163 QSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLT 222

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            LP EI  L    + LK L   NN+L TLP EI  L+ L EL L DN L 
Sbjct: 223 ILPKEIGQL----QNLKLLYSVNNELTTLPKEIGQLENLQELYLNDNQLT 268



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/169 (39%), Positives = 91/169 (53%), Gaps = 4/169 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLS  +L   P +I  +  LK L L NN    +P+EI +L  
Sbjct: 36  TYRDLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N L ++P   G L  L+ LILS N+L + P  I  LK L+ L L  N+L TL
Sbjct: 96  LQELNLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
             EI  L+     L+ L L  N+L+ LP EI  L+ L EL L +N L I
Sbjct: 156 LQEIGQLQS----LQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTI 200



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 14/141 (9%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+     +   +  L LS  +L +LP  I  L+ LKSL L NN+ +
Sbjct: 25  CEIQAEKIKPGTYRDLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFK 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYK 291
           TLP EI  L+ L E    L L NN+L+ LP EI  L+ L  L L         V+ +T  
Sbjct: 85  TLPKEIGQLQNLQE----LNLWNNQLKNLPKEIGQLQNLQTLILS--------VNRLTTF 132

Query: 292 PPSLLELASRTLKVHEIDYSQ 312
           P  + +L  + L+   +DY+Q
Sbjct: 133 PQEIGQL--KNLQKLNLDYNQ 151


>gi|320163316|gb|EFW40215.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
          Length = 560

 Score =  124 bits (311), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 106/310 (34%), Positives = 151/310 (48%), Gaps = 21/310 (6%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSN 124
           N+L   PD   + TNL  L L  N +  LP +IT    L+ L  +NN L+   LP DM  
Sbjct: 233 NSLQSLPDEIGRLTNLEELFLHYNALESLPSSITKLTKLAELRLKNNRLS--QLPVDMGQ 290

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
            KNL++  ++ N+LE  P  I ++  L+ L L +N +  VP     L  L  L  G N L
Sbjct: 291 WKNLRILIVTNNRLESLPDSIGELQLLQELALHSNRIRTVPASFANLKNLSTLYFGENPL 350

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
            ++P  FG L +L     S   L +LP S+SNL  L  L + +N LR LP   I++  LS
Sbjct: 351 VELPADFGRLVELVECDFSRCSLTTLPDSVSNLSKLVRLWVSDNNLRDLPNRWISMVSLS 410

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL------VIRFVSDMTYKPPSLLEL 298
           +    L +  N++  +P ++  L  LS L+L  NPL       +R    +    PSL EL
Sbjct: 411 D----LFVSGNQIAHVPYQLSQLH-LSTLNLHSNPLSHPQHESLRDFEAIAVGVPSLFEL 465

Query: 299 ASRTLKVH---EIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKY 355
           A+R  KVH   E  + Q  LP ++++YL  A  C    C   FF      ++F D     
Sbjct: 466 AAR--KVHSQYETTWHQLPLPLDVLEYLGQARVC--SWCNQPFFQFWWSRLEFCDVAFNS 521

Query: 356 RIPLLQYLCS 365
            IP+   LCS
Sbjct: 522 HIPVSMELCS 531


>gi|418735840|ref|ZP_13292245.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|410748568|gb|EKR01467.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 422

 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 93/227 (40%), Positives = 121/227 (53%), Gaps = 8/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L   P    K   +  L LSNN++T LP+ I     L  L   NNLLT
Sbjct: 63  QNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLT 122

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+  +L+ NQL+  P  I  +  L+ LYL NN L  +P++I +L  L
Sbjct: 123 --TLPKEIGQLQNLRELDLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPKDIGQLQNL 180

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L GN L  +P   G L  L  L L++N L +LP  I NLK L  LLL NN+L TLP
Sbjct: 181 RELYLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLP 240

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  LK L       LL      TLP +I  LK L EL+L  N + 
Sbjct: 241 KEIGKLKNLQVSYLGALLT-----TLPNDIGYLKSLRELNLSGNQIT 282



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 72/166 (43%), Positives = 102/166 (61%), Gaps = 4/166 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           E+LPK++  L+NL    LS NQL+  P +I  +  ++ L L NN L  +P++I KL KL 
Sbjct: 53  ETLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLR 112

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +P   G L  L  L L++NQL++LP  I  L+ L+ L L NN+L+TLP 
Sbjct: 113 ELDLTNNLLTTLPKEIGQLQNLRELDLTNNQLKTLPKDIGQLQNLRELYLDNNQLKTLPK 172

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +I  L+ L E    L L  N+L+TLP +I  L+ L+EL+L +NPL 
Sbjct: 173 DIGQLQNLRE----LYLDGNQLKTLPKDIGKLQNLTELNLTNNPLT 214



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/212 (37%), Positives = 107/212 (50%), Gaps = 25/212 (11%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L   P +  K  NL  L+L+NN +T LP+ I N   L  L+  NN LT
Sbjct: 178 QNLRELYLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELT 237

Query: 115 AESLPKDMSNLKNLKV----------------------FNLSGNQLEQFPIQILDIPTLK 152
             +LPK++  LKNL+V                       NLSGNQ+   P  I  +  L+
Sbjct: 238 --TLPKEIGKLKNLQVSYLGALLTTLPNDIGYLKSLRELNLSGNQITTLPKDIGQLQNLQ 295

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYL  N L  +P+EI +L  L  L L GN +T +P   G+L  L  L LS N L +LP 
Sbjct: 296 VLYLSENQLATLPKEIGQLQNLRELDLSGNQITTLPKDIGELQSLRELNLSGNLLTTLPK 355

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
            I  L+ L+ L L  N++ T+P EI  LK L 
Sbjct: 356 DIGKLQSLRELNLGGNQITTIPKEIGHLKNLQ 387



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/167 (40%), Positives = 97/167 (58%), Gaps = 6/167 (3%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +L + + N  ++++ +L  N  E  P +I ++  L  LYL +N L  +P+EI KL K
Sbjct: 30  TYHNLTEALQNPTDVRILSLHNN--ETLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQK 87

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           +  LSL  N LT +P   G L +L  L L++N L +LP  I  L+ L+ L L NN+L+TL
Sbjct: 88  IERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKEIGQLQNLRELDLTNNQLKTL 147

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P +I  L+ L E    L L NN+L+TLP +I  L+ L EL L  N L
Sbjct: 148 PKDIGQLQNLRE----LYLDNNQLKTLPKDIGQLQNLRELYLDGNQL 190


>gi|418677883|ref|ZP_13239157.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|418687625|ref|ZP_13248784.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|400321073|gb|EJO68933.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|410737949|gb|EKQ82688.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 288

 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 88/213 (41%), Positives = 116/213 (54%), Gaps = 5/213 (2%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNL 125
           N L   P       NL+ L LS N IT LP  I N     +++ N +   E++PK++ NL
Sbjct: 60  NPLKTLPKEIGNLKNLKELYLSTNEITTLPSEIGNLKNLQVLSLN-VNRLETIPKEIGNL 118

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           KNLK  ++  N+L+  P +I ++  LK LYL  N L  +P+EI  L KL  + L  N LT
Sbjct: 119 KNLKELSIGLNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQRMHLSTNELT 178

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
            +P    +L  L  + L DNQ  +LP  I NLK LK L L  N+L +LP+EI  LK L E
Sbjct: 179 KLPQEIKNLEGLIEIYLYDNQFTTLPKEIGNLKNLKELYLSRNQLISLPSEIGNLKNLKE 238

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
               L L  N+L  LP +I  LK LS LSL  N
Sbjct: 239 ----LYLEENQLTKLPKQIAALKKLSRLSLEGN 267



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/191 (40%), Positives = 105/191 (54%), Gaps = 5/191 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLL 113
           +N+  L L  N ++  P       NL+ L L+ NR+  +P+ I N   L  L I  N L 
Sbjct: 73  KNLKELYLSTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKEIGNLKNLKELSIGLNKLK 132

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++ NLKNLK   LS NQL+  P +I ++  L+ ++L  N L  +P+EI  L  
Sbjct: 133 T---LPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQRMHLSTNELTKLPQEIKNLEG 189

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  + L  N  T +P   G+L  L+ L LS NQL SLP+ I NLK LK L L  N+L  L
Sbjct: 190 LIEIYLYDNQFTTLPKEIGNLKNLKELYLSRNQLISLPSEIGNLKNLKELYLEENQLTKL 249

Query: 234 PTEIITLKCLS 244
           P +I  LK LS
Sbjct: 250 PKQIAALKKLS 260



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/202 (40%), Positives = 113/202 (55%), Gaps = 7/202 (3%)

Query: 81  LRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
           LR  D  +N +  LP+ I N   L  L    N +T  +LP ++ NLKNL+V +L+ N+LE
Sbjct: 52  LRYRDNEDNPLKTLPKEIGNLKNLKELYLSTNEIT--TLPSEIGNLKNLQVLSLNVNRLE 109

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
             P +I ++  LK L +G N L  +P+EI  L  L  L L  N L  +P    +L +L+ 
Sbjct: 110 TIPKEIGNLKNLKELSIGLNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQR 169

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRT 259
           + LS N+L  LP  I NL+ L  + L++N+  TLP EI  LK L E    L L  N+L +
Sbjct: 170 MHLSTNELTKLPQEIKNLEGLIEIYLYDNQFTTLPKEIGNLKNLKE----LYLSRNQLIS 225

Query: 260 LPTEIITLKCLSELSLRDNPLV 281
           LP+EI  LK L EL L +N L 
Sbjct: 226 LPSEIGNLKNLKELYLEENQLT 247



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 75/135 (55%), Gaps = 4/135 (2%)

Query: 147 DIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQ 206
           D+  L+Y    +N L  +P+EI  L  L  L L  N +T +P   G+L  L+ L L+ N+
Sbjct: 48  DVLVLRYRDNEDNPLKTLPKEIGNLKNLKELYLSTNEITTLPSEIGNLKNLQVLSLNVNR 107

Query: 207 LESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIIT 266
           LE++P  I NLK LK L +  NKL+TLP EI  LK L E    L L  N+L+ LP EI  
Sbjct: 108 LETIPKEIGNLKNLKELSIGLNKLKTLPKEIGNLKNLKE----LYLSRNQLKVLPQEIWN 163

Query: 267 LKCLSELSLRDNPLV 281
           LK L  + L  N L 
Sbjct: 164 LKKLQRMHLSTNELT 178



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 79/172 (45%), Gaps = 7/172 (4%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
             ++E +P    N K  N+  L +  N L   P       NL+ L LS N++  LPQ I 
Sbjct: 105 VNRLETIPKEIGNLK--NLKELSIGLNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIW 162

Query: 100 NFPLSTLIARNNLLTAE--SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           N      + R +L T E   LP+++ NL+ L    L  NQ    P +I ++  LK LYL 
Sbjct: 163 NL---KKLQRMHLSTNELTKLPQEIKNLEGLIEIYLYDNQFTTLPKEIGNLKNLKELYLS 219

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            N L  +P EI  L  L  L L  N LT +P     L +L  L L  NQ  S
Sbjct: 220 RNQLISLPSEIGNLKNLKELYLEENQLTKLPKQIAALKKLSRLSLEGNQFPS 271



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/101 (45%), Positives = 60/101 (59%), Gaps = 4/101 (3%)

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P   G+L  L+ L LS N++ +LP+ I NLK L+ L L+ N+L T+P EI  LK
Sbjct: 60  NPLKTLPKEIGNLKNLKELYLSTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKEIGNLK 119

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            L E    L +  NKL+TLP EI  LK L EL L  N L +
Sbjct: 120 NLKE----LSIGLNKLKTLPKEIGNLKNLKELYLSRNQLKV 156



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 62/128 (48%), Gaps = 7/128 (5%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           Q+++LP   +N K   +  + L  N L+  P        L  + L +N+ T LP+ I N 
Sbjct: 153 QLKVLPQEIWNLK--KLQRMHLSTNELTKLPQEIKNLEGLIEIYLYDNQFTTLPKEIGNL 210

Query: 102 P-LSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
             L  L ++RN L+   SLP ++ NLKNLK   L  NQL + P QI  +  L  L L  N
Sbjct: 211 KNLKELYLSRNQLI---SLPSEIGNLKNLKELYLEENQLTKLPKQIAALKKLSRLSLEGN 267

Query: 160 SLNHVPRE 167
                 +E
Sbjct: 268 QFPSEEKE 275


>gi|429962677|gb|ELA42221.1| hypothetical protein VICG_00620, partial [Vittaforma corneae ATCC
           50505]
          Length = 633

 Score =  124 bits (311), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 101/301 (33%), Positives = 150/301 (49%), Gaps = 42/301 (13%)

Query: 16  SDSFKTVSIKTLDFSYSSLDS---------------------ETLATQIELLPN------ 48
           SD  + V ++ LD S+++L++                      TL +++E L N      
Sbjct: 61  SDVGRLVKLEKLDLSFNNLETLPPEIGELKNLQHLGLYGNRLRTLPSEVEELKNLQHLDL 120

Query: 49  --NDYN------KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN 100
             N++       +K +N++ L+L  N    FP   ++   L+ L+L +N++  LP  I  
Sbjct: 121 RYNEFESFPTVIRKLKNLERLILNGNKFGLFPIEIAELKKLQRLELHDNKLKLLPDEIGG 180

Query: 101 F-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
              L TL    N    ES P  +  LKNL+   L GN+LE  P++I+ + +L+ L L  N
Sbjct: 181 MKELQTLYLGYN--EFESFPTVIVKLKNLQHLFLGGNKLETLPVEIVKLKSLQKLNLLKN 238

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
                P  + +L  L +L+L  N L  +PDT G+L  L+ L L  N+ E  P  +  L+ 
Sbjct: 239 RFEIFPNVVGELENLKILNLSNNKLETLPDTIGELENLQELYLLKNRFEIFPNVVGELEN 298

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           LK L L NNKL+ LP+EI  L    E L+ LLL NNKL TLP  I  L+ L EL+L  N 
Sbjct: 299 LKILNLSNNKLKILPSEIGKL----ENLQHLLLINNKLETLPAAIGELQNLRELNLGGNK 354

Query: 280 L 280
           L
Sbjct: 355 L 355



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 88/252 (34%), Positives = 116/252 (46%), Gaps = 22/252 (8%)

Query: 51  YNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIAR 109
           +++ P ++  + +    + F   +  +   L  LDLS N +  LP  I     L  L   
Sbjct: 39  FDEYPVDVTEISICRQGIRFIGSDVGRLVKLEKLDLSFNNLETLPPEIGELKNLQHLGLY 98

Query: 110 NNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREIN 169
            N L   +LP ++  LKNL+  +L  N+ E FP  I  +  L+ L L  N     P EI 
Sbjct: 99  GNRL--RTLPSEVEELKNLQHLDLRYNEFESFPTVIRKLKNLERLILNGNKFGLFPIEIA 156

Query: 170 KLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           +L KL  L L  N L  +PD  G + +L+ L L  N+ ES P  I  LK L+ L L  NK
Sbjct: 157 ELKKLQRLELHDNKLKLLPDEIGGMKELQTLYLGYNEFESFPTVIVKLKNLQHLFLGGNK 216

Query: 230 LRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCL 270
           L TLP EI+ LK L                    E LK L L NNKL TLP  I  L+ L
Sbjct: 217 LETLPVEIVKLKSLQKLNLLKNRFEIFPNVVGELENLKILNLSNNKLETLPDTIGELENL 276

Query: 271 SELSLRDNPLVI 282
            EL L  N   I
Sbjct: 277 QELYLLKNRFEI 288



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/198 (36%), Positives = 104/198 (52%), Gaps = 7/198 (3%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           +++LLP+     K   + TL L +N    FP    K  NL+ L L  N++  LP  I   
Sbjct: 170 KLKLLPDEIGGMK--ELQTLYLGYNEFESFPTVIVKLKNLQHLFLGGNKLETLPVEIVKL 227

Query: 102 PLSTLIARNNLLTA--ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                + + NLL    E  P  +  L+NLK+ NLS N+LE  P  I ++  L+ LYL  N
Sbjct: 228 ---KSLQKLNLLKNRFEIFPNVVGELENLKILNLSNNKLETLPDTIGELENLQELYLLKN 284

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
                P  + +L  L +L+L  N L  +P   G L  L+ L+L +N+LE+LPA+I  L+ 
Sbjct: 285 RFEIFPNVVGELENLKILNLSNNKLKILPSEIGKLENLQHLLLINNKLETLPAAIGELQN 344

Query: 220 LKSLLLHNNKLRTLPTEI 237
           L+ L L  NKL TLP EI
Sbjct: 345 LRELNLGGNKLETLPIEI 362


>gi|456982733|gb|EMG19248.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 299

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 103/266 (38%), Positives = 141/266 (53%), Gaps = 23/266 (8%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLP--------NNDYNKKPE------NIDTLLLYHNNL 68
           ++K+L+ SY+ +  +T+  +IE L         NN     P+      N+ +L L  N L
Sbjct: 41  NLKSLNLSYNQI--KTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRL 98

Query: 69  SFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKN 127
           +  P    +  NL+SLDLS NR+T LPQ I +   L  L   +N LT   LP ++  LKN
Sbjct: 99  TTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVSNQLTI--LPNEIGQLKN 156

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           L+  NL  N+L     +I  +  LK L L +N L   P+EI +L  L VL LG N LT +
Sbjct: 157 LQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLKNLQVLDLGSNQLTTL 216

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
           P+  G L  L+ L L  NQL +LP  I  LK L+ L L  N+L+TLP EI  LK     L
Sbjct: 217 PEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLK----NL 272

Query: 248 KSLLLHNNKLRTLPTEIITLKCLSEL 273
           ++L L  N+L  LP EI  L+ L  L
Sbjct: 273 QTLYLGYNQLTVLPKEIGQLQNLKVL 298



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/198 (42%), Positives = 113/198 (57%), Gaps = 7/198 (3%)

Query: 86  LSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQ 144
           + NN++T LPQ I     L  L    N LT  +LP+++  LKNLK  NLS NQ++  P +
Sbjct: 1   MPNNQLTTLPQEIGQLQKLQWLYLPKNQLT--TLPQEIGQLKNLKSLNLSYNQIKTIPKE 58

Query: 145 ILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD 204
           I  +  L+ L L NN L  +P+EI +L  L  L L  N LT +P   G L  L++L LS 
Sbjct: 59  IEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLST 118

Query: 205 NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           N+L +LP  I +L+ L+ L L +N+L  LP EI  LK     L++L L NN+L TL  EI
Sbjct: 119 NRLTTLPQEIGHLQNLQELYLVSNQLTILPNEIGQLK----NLQTLNLRNNRLTTLSKEI 174

Query: 265 ITLKCLSELSLRDNPLVI 282
             L+ L  L LR N L I
Sbjct: 175 EQLQNLKSLDLRSNQLTI 192



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 96/267 (35%), Positives = 131/267 (49%), Gaps = 36/267 (13%)

Query: 46  LPNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           LP N     P+      N+ +L L +N +   P    K   L+SL L NN++T LPQ I 
Sbjct: 24  LPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIG 83

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L +L    N LT  +LP+++  L+NL+  +LS N+L   P +I  +  L+ LYL +
Sbjct: 84  QLQNLQSLDLSTNRLT--TLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQELYLVS 141

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDI-----------------------PDTFGDLY 195
           N L  +P EI +L  L  L+L  N LT +                       P   G L 
Sbjct: 142 NQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTIFPKEIGQLK 201

Query: 196 QLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNN 255
            L+ L L  NQL +LP  I  LK L++L L +N+L TLP EI  LK     L+ L L  N
Sbjct: 202 NLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIKQLK----NLQLLDLSYN 257

Query: 256 KLRTLPTEIITLKCLSELSLRDNPLVI 282
           +L+TLP EI  LK L  L L  N L +
Sbjct: 258 QLKTLPKEIEQLKNLQTLYLGYNQLTV 284



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 107/298 (35%), Positives = 145/298 (48%), Gaps = 15/298 (5%)

Query: 46  LPNNDYNKKPENIDTL----LLY--HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           +PNN     P+ I  L     LY   N L+  P    +  NL+SL+LS N+I  +P+ I 
Sbjct: 1   MPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIE 60

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L +L   NN LT  +LP+++  L+NL+  +LS N+L   P +I  +  L+ L L  
Sbjct: 61  KLQKLQSLGLDNNQLT--TLPQEIGQLQNLQSLDLSTNRLTTLPQEIGQLQNLQSLDLST 118

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P+EI  L  L  L L  N LT +P+  G L  L+ L L +N+L +L   I  L+
Sbjct: 119 NRLTTLPQEIGHLQNLQELYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQ 178

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            LKSL L +N+L   P EI  LK     L+ L L +N+L TLP  I  LK L  L L  N
Sbjct: 179 NLKSLDLRSNQLTIFPKEIGQLK----NLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSN 234

Query: 279 PLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKG 336
            L          K   LL+L+   LK    +  Q    Q L  YL      V PK  G
Sbjct: 235 QLTTLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQTL--YLGYNQLTVLPKEIG 290



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 56/102 (54%), Gaps = 5/102 (4%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI--ARNNLL 113
           +N+  L L  N L+  P+   +  NL++LDL +N++T LPQ I       L+  + N L 
Sbjct: 201 KNLQVLDLGSNQLTTLPEGIGQLKNLQTLDLDSNQLTTLPQEIKQLKNLQLLDLSYNQL- 259

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLY 155
             ++LPK++  LKNL+   L  NQL   P +I  +  LK L+
Sbjct: 260 --KTLPKEIEQLKNLQTLYLGYNQLTVLPKEIGQLQNLKVLF 299


>gi|429961782|gb|ELA41326.1| hypothetical protein VICG_01566, partial [Vittaforma corneae ATCC
           50505]
          Length = 564

 Score =  124 bits (311), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 88/224 (39%), Positives = 120/224 (53%), Gaps = 7/224 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           ++ L L  NNL   P    +  NL+ LDL  NR+  LP  +     L  L    N L   
Sbjct: 69  LEKLELSLNNLKTLPPEIGELKNLQHLDLYGNRLRTLPYEVEELKNLQHLDLYGNRL--R 126

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LP ++  LKNL+  +L  N+ E FP  I  +  L+ L L +N     P EI +L KL  
Sbjct: 127 TLPYEVEELKNLQHLDLGHNKFESFPTVIRKLKNLERLDLNDNKFGLFPIEIAELKKLQR 186

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L GN L  +PD  G++ +L  L L DN+LES P  I+ LK L++L L  NKL+ LP E
Sbjct: 187 LELRGNKLKLLPDEIGEMKELRTLHLDDNELESFPTVIAELKKLQTLYLRGNKLKLLPDE 246

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I TLK    +L++L L  N+  + PT I+ LK L  L L +N L
Sbjct: 247 IETLK----ELQTLYLGYNEFESFPTVIVKLKNLQHLFLGNNKL 286



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/183 (38%), Positives = 94/183 (51%), Gaps = 3/183 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L HN    FP    K  NL  LDL++N+    P  I     L  L  R N L 
Sbjct: 136 KNLQHLDLGHNKFESFPTVIRKLKNLERLDLNDNKFGLFPIEIAELKKLQRLELRGNKLK 195

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP ++  +K L+  +L  N+LE FP  I ++  L+ LYL  N L  +P EI  L +L
Sbjct: 196 L--LPDEIGEMKELRTLHLDDNELESFPTVIAELKKLQTLYLRGNKLKLLPDEIETLKEL 253

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L LG N     P     L  L+ L L +N+LE+LPA +  L+ L  L L++NKL TLP
Sbjct: 254 QTLYLGYNEFESFPTVIVKLKNLQHLFLGNNKLETLPAKLEELEHLGELYLNDNKLETLP 313

Query: 235 TEI 237
            EI
Sbjct: 314 IEI 316



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 68/187 (36%), Positives = 95/187 (50%), Gaps = 10/187 (5%)

Query: 97  AITNFPLSTL---IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKY 153
           +  N+P+ T    I R  +   +S   ++  L  L+   LS N L+  P +I ++  L++
Sbjct: 38  SFGNYPVDTTEISICRQGIRYIDS---NIKRLVKLEKLELSLNNLKTLPPEIGELKNLQH 94

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           L L  N L  +P E+ +L  L  L L GN L  +P    +L  L+ L L  N+ ES P  
Sbjct: 95  LDLYGNRLRTLPYEVEELKNLQHLDLYGNRLRTLPYEVEELKNLQHLDLGHNKFESFPTV 154

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           I  LK L+ L L++NK    P EI  LK    KL+ L L  NKL+ LP EI  +K L  L
Sbjct: 155 IRKLKNLERLDLNDNKFGLFPIEIAELK----KLQRLELRGNKLKLLPDEIGEMKELRTL 210

Query: 274 SLRDNPL 280
            L DN L
Sbjct: 211 HLDDNEL 217



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 74/146 (50%), Gaps = 4/146 (2%)

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++   I +L KL  L L  N+L  +P   G+L  L+ L L  N+L +LP  +  LK 
Sbjct: 55  GIRYIDSNIKRLVKLEKLELSLNNLKTLPPEIGELKNLQHLDLYGNRLRTLPYEVEELKN 114

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L+ L L+ N+LRTLP E+  LK     L+ L L +NK  + PT I  LK L  L L DN 
Sbjct: 115 LQHLDLYGNRLRTLPYEVEELK----NLQHLDLGHNKFESFPTVIRKLKNLERLDLNDNK 170

Query: 280 LVIRFVSDMTYKPPSLLELASRTLKV 305
             +  +     K    LEL    LK+
Sbjct: 171 FGLFPIEIAELKKLQRLELRGNKLKL 196


>gi|417771010|ref|ZP_12418908.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418682662|ref|ZP_13243876.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|418716202|ref|ZP_13276216.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421116971|ref|ZP_15577343.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|400325584|gb|EJO77859.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409946978|gb|EKN96984.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|410011470|gb|EKO69589.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410787885|gb|EKR81614.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 267

 Score =  124 bits (310), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 92/250 (36%), Positives = 127/250 (50%), Gaps = 7/250 (2%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           L   P     F NL  L+L  N++T LP+ I     L  L    N  T  SLPK++  L+
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFT--SLPKEIGQLQ 63

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL+  +L+GNQ    P +I  +  L+ L L  N L  +P+EI +L  L  L L GN  T 
Sbjct: 64  NLERLDLAGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTS 123

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P   G L +LEAL L  N+    P  I   + LK L L  ++L+TLP EI+ L    + 
Sbjct: 124 LPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLL----QN 179

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVH 306
           L+SL L  N+L +LP EI  L+ L EL+L+DN L          +   +L L S +  + 
Sbjct: 180 LQSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQKLEVLRLYSNSFSLK 239

Query: 307 EIDYSQEHLP 316
           E    QE LP
Sbjct: 240 EKQKIQELLP 249



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 89/229 (38%), Positives = 124/229 (54%), Gaps = 7/229 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N L+  P    +  NLR L+L+ N+ T LP+ I     L  L    N  T
Sbjct: 17  QNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFT 76

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLPK++  L+NL+V NL+GNQL   P +I  +  L+ L L  N    +P+EI +L KL
Sbjct: 77  --SLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKL 134

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N  T  P        L+ L LS +QL++LP  I  L+ L+SL L  N+L +LP
Sbjct: 135 EALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSLP 194

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
            EI  L+ L E    L L +NKL+TLP EI  L+ L  L L  N   ++
Sbjct: 195 KEIGQLQNLFE----LNLQDNKLKTLPKEIGQLQKLEVLRLYSNSFSLK 239



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 63/123 (51%), Gaps = 4/123 (3%)

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           +G + L  +PR I     L  L+L GN LT +P   G L  L  L L+ NQ  SLP  I 
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            L+ L+ L L  N+  +LP EI  L    + L+ L L  N+L +LP EI  L+ L  L L
Sbjct: 61  QLQNLERLDLAGNQFTSLPKEIGQL----QNLRVLNLAGNQLTSLPKEIGQLQNLERLDL 116

Query: 276 RDN 278
             N
Sbjct: 117 AGN 119


>gi|418701701|ref|ZP_13262623.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759265|gb|EKR25480.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 310

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 98/249 (39%), Positives = 125/249 (50%), Gaps = 22/249 (8%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN-NLL 113
           P ++  L L    L+  P    +  NL+ L+L NN+IT LP+ I       L+    N L
Sbjct: 47  PLDVRVLNLSEQKLTTLPKEIGQLKNLQELNLGNNQITILPKEIGQLQNLQLLGLYYNQL 106

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++  LKNL+   L  NQ+   P +I  +  LK L+L NN L  +P+EI +L  
Sbjct: 107 TI--LPKEIEQLKNLQTLYLGNNQITILPKEIRQLQNLKVLFLSNNQLTTLPKEIEQLKN 164

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L LG N LT  P     L  L+ L L DNQL  LP  I  LK L+ L L  N+L+TL
Sbjct: 165 LQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLKTL 224

Query: 234 PTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           P EI  LK L                    + LK L L+NN+L TLP EI  LK L EL 
Sbjct: 225 PKEIEQLKNLQTLYLGYNQLTVLPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELY 284

Query: 275 LRDNPLVIR 283
           L +N L I 
Sbjct: 285 LNNNQLSIE 293



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 75/191 (39%), Positives = 102/191 (53%), Gaps = 4/191 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +L + + N  +++V NLS  +L   P +I  +  L+ L LGNN +  +P+EI +L  
Sbjct: 36  TYRNLTEALQNPLDVRVLNLSEQKLTTLPKEIGQLKNLQELNLGNNQITILPKEIGQLQN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P     L  L+ L L +NQ+  LP  I  L+ LK L L NN+L TL
Sbjct: 96  LQLLGLYYNQLTILPKEIEQLKNLQTLYLGNNQITILPKEIRQLQNLKVLFLSNNQLTTL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPP 293
           P EI  LK     L++L L NN+L T P EI  LK L  L L DN L +        K  
Sbjct: 156 PKEIEQLK----NLQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVLPQEIKQLKNL 211

Query: 294 SLLELASRTLK 304
            LL+L+   LK
Sbjct: 212 QLLDLSYNQLK 222



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 65/119 (54%), Gaps = 4/119 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L+  P    +  NL+ LDLS N++  LP+ I     L TL    N LT
Sbjct: 186 KNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLKTLPKEIEQLKNLQTLYLGYNQLT 245

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INKLC 172
              LPK++  L+NLKV  L+ NQL   P +I  +  L+ LYL NN L+   +E I KL 
Sbjct: 246 V--LPKEIGQLQNLKVLFLNNNQLTTLPKEIGQLKNLQELYLNNNQLSIEEKERIQKLI 302



 Score = 41.6 bits (96), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 56/111 (50%), Gaps = 4/111 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           CK+    +   +  ++ +   +   +  L LS+ +L +LP  I  LK L+ L L NN++ 
Sbjct: 25  CKIQAEEVESGTYRNLTEALQNPLDVRVLNLSEQKLTTLPKEIGQLKNLQELNLGNNQIT 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            LP EI  L+ L      L L+ N+L  LP EI  LK L  L L +N + I
Sbjct: 85  ILPKEIGQLQNLQ----LLGLYYNQLTILPKEIEQLKNLQTLYLGNNQITI 131


>gi|417765301|ref|ZP_12413265.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352483|gb|EJP04668.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 288

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/225 (38%), Positives = 126/225 (56%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           ++  L+L    L+  P    +  NL+ LDL  N+   +P+ I     L  L    N    
Sbjct: 51  DVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYN--QF 108

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           +++PK +  LKNL+V NLS NQL   P +I  +  L+ L L +N L  +P+EI KL  L 
Sbjct: 109 KTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLTTLPKEIGKLENLQ 168

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           VL+L  N L   P   G L  L+ L L  N+L++LP  I  LK L++L L+ N+L TLP 
Sbjct: 169 VLNLSSNQLITFPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPR 228

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI  L+ L+E    L L +N++ TLP EII L+ L +L+L +NP+
Sbjct: 229 EIGRLQSLTE----LHLQHNQIATLPDEIIQLQNLRKLTLYENPI 269



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 70/131 (53%), Gaps = 4/131 (3%)

Query: 151 LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           ++ L L    L  +P++I +L  L +L L  N    +P     L  L+ L L  NQ +++
Sbjct: 52  VRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQFKTV 111

Query: 211 PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
           P  I  LK L+ L L +N+L TLP EI  L    E L+ L L +N+L TLP EI  L+ L
Sbjct: 112 PKKIGQLKNLQVLNLSSNQLTTLPKEIGKL----ENLQVLNLSSNQLTTLPKEIGKLENL 167

Query: 271 SELSLRDNPLV 281
             L+L  N L+
Sbjct: 168 QVLNLSSNQLI 178


>gi|298241193|ref|ZP_06965000.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297554247|gb|EFH88111.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 349

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 118/225 (52%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           ++  L L+ N L   P    +  +L+ L L+ N++  +P  +     L  L    N LT 
Sbjct: 55  SLQELYLFGNQLREVPAELGQLRSLQELYLAGNQLREVPAELGQLRSLQELYLSGNQLTG 114

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P ++  L+ L+   LSGNQL + P ++  +  L  L L  N L  VP E+ +L  LH
Sbjct: 115 --IPTELGQLRGLQELYLSGNQLREVPTELGQLRDLHMLDLSGNQLREVPAELGQLRDLH 172

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L L GN L ++P   G L +LE L L+ NQL  +PA +  L+ L+ L L  N+LR +PT
Sbjct: 173 MLDLSGNQLREVPAELGQLSRLEKLYLAGNQLREVPAELGQLRGLQELYLSGNQLREVPT 232

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           E+  L+ L E    L L  N+L  +PTE+  L  L +L L  N L
Sbjct: 233 ELGQLRDLQE----LDLSGNQLTGIPTELGQLCGLQDLYLAGNQL 273



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 115/239 (48%), Gaps = 15/239 (6%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           ++  L L  N L+  P    +   L+ L LS N++  +P  +     L  L    N L  
Sbjct: 101 SLQELYLSGNQLTGIPTELGQLRGLQELYLSGNQLREVPTELGQLRDLHMLDLSGNQLR- 159

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P ++  L++L + +LSGNQL + P ++  +  L+ LYL  N L  VP E+ +L  L 
Sbjct: 160 -EVPAELGQLRDLHMLDLSGNQLREVPAELGQLSRLEKLYLAGNQLREVPAELGQLRGLQ 218

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L GN L ++P   G L  L+ L LS NQL  +P  +  L  L+ L L  N+LR +P 
Sbjct: 219 ELYLSGNQLREVPTELGQLRDLQELDLSGNQLTGIPTELGQLCGLQDLYLAGNQLREVPA 278

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPS 294
           E+  L+     L  L L  N+LR +P E+  L  L    + DN        D    PPS
Sbjct: 279 ELGQLR----DLHMLDLSGNQLREVPAELGQLSRLHAFCIEDN--------DQLLTPPS 325



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 64/183 (34%), Positives = 92/183 (50%), Gaps = 19/183 (10%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            +P ++  L++L+   L GNQL + P ++  + +L+ LYL  N L  VP E+ +L  L  
Sbjct: 45  QVPAELGQLRSLQELYLFGNQLREVPAELGQLRSLQELYLAGNQLREVPAELGQLRSLQE 104

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L GN LT IP   G L  L+ L LS NQL  +P  +  L+ L  L L  N+LR +P E
Sbjct: 105 LYLSGNQLTGIPTELGQLRGLQELYLSGNQLREVPTELGQLRDLHMLDLSGNQLREVPAE 164

Query: 237 IITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRD 277
           +  L+ L                     +L+ L L  N+LR +P E+  L+ L EL L  
Sbjct: 165 LGQLRDLHMLDLSGNQLREVPAELGQLSRLEKLYLAGNQLREVPAELGQLRGLQELYLSG 224

Query: 278 NPL 280
           N L
Sbjct: 225 NQL 227



 Score = 94.7 bits (234), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 88/165 (53%), Gaps = 6/165 (3%)

Query: 118 LPKDMS--NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           +P D+   +L NL   ++S   L Q P ++  + +L+ LYL  N L  VP E+ +L  L 
Sbjct: 21  IPNDVKYDDLGNLITLDISDKGLTQVPAELGQLRSLQELYLFGNQLREVPAELGQLRSLQ 80

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L GN L ++P   G L  L+ L LS NQL  +P  +  L+ L+ L L  N+LR +PT
Sbjct: 81  ELYLAGNQLREVPAELGQLRSLQELYLSGNQLTGIPTELGQLRGLQELYLSGNQLREVPT 140

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           E+  L+     L  L L  N+LR +P E+  L+ L  L L  N L
Sbjct: 141 ELGQLR----DLHMLDLSGNQLREVPAELGQLRDLHMLDLSGNQL 181


>gi|24215150|ref|NP_712631.1| hypothetical protein LA_2450 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074468|ref|YP_005988785.1| hypothetical protein LIF_A2010 [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196220|gb|AAN49649.1| hypothetical protein LA_2450 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458257|gb|AER02802.1| hypothetical protein LIF_A2010 [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 633

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/246 (38%), Positives = 124/246 (50%), Gaps = 22/246 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L  FP    +  NL++L+L +N++  LP  I     L  L  R N LT
Sbjct: 119 QNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLT 178

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+  NL  NQL   P++I  +  L+ L L  N L   P+EI +L  L
Sbjct: 179 V--LPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENL 236

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N LT +P   G L  LE L LS+NQL + P  I  LK L+ L L  N+L T P
Sbjct: 237 QELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLRDLGLGRNQLTTFP 296

Query: 235 TEIITLKCLS------EKLKSL-------------LLHNNKLRTLPTEIITLKCLSELSL 275
            EI  LK L        + K++              L  N+L TLP EI  LK L +LSL
Sbjct: 297 KEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSL 356

Query: 276 RDNPLV 281
             N L 
Sbjct: 357 GRNQLT 362



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 120/228 (52%), Gaps = 9/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLL 113
           +N+  L L  N L+ FP    +   L SLDLS NR+  LP  I     L  L + +N L+
Sbjct: 73  KNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLI 132

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T    PK++  L+NL+  NL  NQL   P++I  +  L+ L L  N L  +P+EI +L  
Sbjct: 133 T---FPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQN 189

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N L  +P   G L  L+ L LS+NQL + P  I  L+ L+ L L  N+L  L
Sbjct: 190 LQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTAL 249

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  LK     L++L L  N+L T P EI  LK L +L L  N L 
Sbjct: 250 PKEIGQLK----NLENLELSENQLTTFPKEIGQLKKLRDLGLGRNQLT 293



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 95/227 (41%), Positives = 120/227 (52%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  P    +  NL++L LS N++T  P+ I     L  L  + N LT
Sbjct: 188 QNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLT 247

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  LPK++  LKNL+   LS NQL  FP +I  +  L+ L LG N L   P+EI +L  L
Sbjct: 248 A--LPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLRDLGLGRNQLTTFPKEIGQLKNL 305

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  N    +    G L  L  L LS NQL +LPA I  LK L+ L L  N+L TLP
Sbjct: 306 QMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLP 365

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  LK L     +L L  N+L TLP EI  LK L  L L  N L 
Sbjct: 366 KEIGQLKNLY----NLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLA 408



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/275 (36%), Positives = 129/275 (46%), Gaps = 55/275 (20%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI----------------T 99
           +N+ TL L  N L+ FP    +  NL+ L+L  NR+T LP+ I                T
Sbjct: 211 QNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLT 270

Query: 100 NFP-----LSTL----IARNNLLTAESLPKDMSNLKNLKVFNL----------------- 133
            FP     L  L    + RN L T    PK++  LKNL++ +L                 
Sbjct: 271 TFPKEIGQLKKLRDLGLGRNQLTT---FPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKN 327

Query: 134 ------SGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
                 S NQL   P +I  +  L+ L LG N L  +P+EI +L  L+ L LG N LT +
Sbjct: 328 LLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTL 387

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
           P   G L  L  L L  NQL + P  I  L+ L+ L L NN+L  LP EI  LK     L
Sbjct: 388 PKEIGQLKNLYNLGLGRNQLATFPKEIGQLENLQELDLWNNRLTALPKEIGQLK----NL 443

Query: 248 KSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           ++L L  N+L T P EI  LK L +L L  N LVI
Sbjct: 444 ENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVI 478



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 85/230 (36%), Positives = 116/230 (50%), Gaps = 7/230 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNN 111
           + P N+  L L   N +  P    +  NL+ LDL +N++   P  I     L +L    N
Sbjct: 47  QNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSEN 106

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            L    LP ++  L+NL+   L  N+L  FP +I  +  L+ L L +N L  +P EI +L
Sbjct: 107 RLVM--LPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATLPVEIGQL 164

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L+L  N LT +P   G L  L+ L L DNQL +LP  I  L+ L++L L  N+L 
Sbjct: 165 QNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLT 224

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           T P EI  L    E L+ L L  N+L  LP EI  LK L  L L +N L 
Sbjct: 225 TFPKEIGQL----ENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLT 270



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/238 (38%), Positives = 111/238 (46%), Gaps = 32/238 (13%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDL-----------------------SNNRITHLPQAIT 99
           L  N L+ FP    +  NL+ LDL                       S N++  LP  I 
Sbjct: 287 LGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIG 346

Query: 100 NFP-LSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
               L  L + RN L T   LPK++  LKNL   +L  NQL   P +I  +  L  L LG
Sbjct: 347 QLKKLQDLSLGRNQLTT---LPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLG 403

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
            N L   P+EI +L  L  L L  N LT +P   G L  LE L LS+NQL + P  I  L
Sbjct: 404 RNQLATFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQL 463

Query: 218 KMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
           K L+ L L  N+L  LP EI  L    EKL+ L L  N+L  LP EI  LK L  L L
Sbjct: 464 KKLQDLGLSYNRLVILPKEIGQL----EKLQDLGLSYNRLVILPKEIGQLKNLQMLDL 517



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/210 (40%), Positives = 110/210 (52%), Gaps = 7/210 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+ FP    +  NL+ LDL NNR+T LP+ I     L  L    N LT
Sbjct: 395 KNLYNLGLGRNQLATFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLT 454

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  LK L+   LS N+L   P +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 455 --TFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNL 512

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  N    +    G L  L  L LS NQL +LPA I  LK L +L L  N+L TLP
Sbjct: 513 QMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLP 572

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
            EI  LK L     +L L  N+L TLP EI
Sbjct: 573 KEIGQLKNLY----NLGLGTNQLTTLPKEI 598



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 90/227 (39%), Positives = 115/227 (50%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +  NL +L L  N++   P+ I     L  L   NN LT
Sbjct: 372 KNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLATFPKEIGQLENLQELDLWNNRLT 431

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  LPK++  LKNL+   LS NQL  FP +I  +  L+ L L  N L  +P+EI +L KL
Sbjct: 432 A--LPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKL 489

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P   G L  L+ L L  NQ +++   I  LK L  L L  N+L TLP
Sbjct: 490 QDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLP 549

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  LK L     +L L  N+L TLP EI  LK L  L L  N L 
Sbjct: 550 AEIGQLKNLY----NLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLT 592



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 90/168 (53%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L + + N  N++V NLSG      P +I  +  L+ L LG+N L   P  I +L K
Sbjct: 38  TYRDLTEALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQK 97

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L  +P+  G L  L+ L L  N+L + P  I  L+ L++L L +N+L TL
Sbjct: 98  LESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLQNLQTLNLQDNQLATL 157

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L+ L EKL    L  N+L  LP EI  L+ L  L+L+DN L 
Sbjct: 158 PVEIGQLQNL-EKLN---LRKNRLTVLPKEIGQLQNLQTLNLQDNQLA 201



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/132 (40%), Positives = 76/132 (57%), Gaps = 4/132 (3%)

Query: 151 LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           ++ L L   +   +P+EI +L  L  L LG N L   P    +L +LE+L LS+N+L  L
Sbjct: 52  VRVLNLSGQNFTTLPKEIEQLKNLQELDLGDNQLATFPAVIVELQKLESLDLSENRLVML 111

Query: 211 PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
           P  I  L+ L+ L L+ NKL T P EI  L    + L++L L +N+L TLP EI  L+ L
Sbjct: 112 PNEIGRLQNLQELGLYKNKLITFPKEIGQL----QNLQTLNLQDNQLATLPVEIGQLQNL 167

Query: 271 SELSLRDNPLVI 282
            +L+LR N L +
Sbjct: 168 EKLNLRKNRLTV 179


>gi|421117624|ref|ZP_15577983.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410010838|gb|EKO68970.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 377

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 90/203 (44%), Positives = 118/203 (58%), Gaps = 7/203 (3%)

Query: 81  LRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
           +R LDLS NR   LP+ I     L  L    N LT   LPK++  LKNL+  NLS NQ++
Sbjct: 48  VRILDLSANRFKTLPKEIGKLKNLQELNLNKNQLTI--LPKEIGQLKNLRKLNLSANQIK 105

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
             P +I  +  L+ LYL NN L  +P+EI +L KL  L L  N LT +P   G L  L++
Sbjct: 106 TIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKS 165

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRT 259
           L LS NQ++++P  I  L+ L+SL L NN+L TLP EI  L    + L+SL L  N+L T
Sbjct: 166 LNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQL----QNLQSLDLSTNRLTT 221

Query: 260 LPTEIITLKCLSELSLRDNPLVI 282
           LP EI  L+ L +L L  N L I
Sbjct: 222 LPQEIGHLQNLQDLYLVSNQLTI 244



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/229 (39%), Positives = 125/229 (54%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K +N+  L L  N L+  P    +  NLR L+LS N+I  +P+ I     L +L   NN 
Sbjct: 67  KLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQ 126

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP+++  L+ L+   L  NQL   P +I  +  LK L L  N +  +P+EI KL 
Sbjct: 127 LT--TLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQ 184

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  L L  N LT +P   G L  L++L LS N+L +LP  I +L+ L+ L L +N+L  
Sbjct: 185 KLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTI 244

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP EI  LK     L++L L NN+L TL  EI  L+ L  L LR N L 
Sbjct: 245 LPNEIGQLK----NLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLT 289



 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 95/227 (41%), Positives = 122/227 (53%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N+  L L  N +   P    K   L+SL L NN++T LPQ I     L  L    N LT
Sbjct: 92  KNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLT 151

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+++  LKNLK  NLS NQ++  P +I  +  L+ L L NN L  +P+EI +L  L
Sbjct: 152 --TLPQEIGQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNL 209

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L+ L L  NQL  LP  I  LK L++L L NN+L TL 
Sbjct: 210 QSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLS 269

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L    + LKSL L +N+L T P EI  LK L  L+L  N L 
Sbjct: 270 KEIEQL----QNLKSLDLRSNQLTTFPKEIGQLKNLQTLNLGSNQLT 312



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 94/242 (38%), Positives = 132/242 (54%), Gaps = 13/242 (5%)

Query: 46  LPNNDYNKKPENIDTL----LLY--HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           LPNN     P+ I  L     LY   N L+  P    +  NL+SL+LS N+I  +P+ I 
Sbjct: 122 LPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKEIE 181

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L +L   NN LT  +LP+++  L+NL+  +LS N+L   P +I  +  L+ LYL +
Sbjct: 182 KLQKLQSLGLDNNQLT--TLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVS 239

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P EI +L  L  L+L  N LT +      L  L++L L  NQL + P  I  LK
Sbjct: 240 NQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLK 299

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L++L L +N+L TLP  I  LK     L++L L +N+L TLP EI  L+ L EL L +N
Sbjct: 300 NLQTLNLGSNQLTTLPEGIGQLK----NLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNN 355

Query: 279 PL 280
            L
Sbjct: 356 QL 357



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 116/209 (55%), Gaps = 14/209 (6%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           ++K+L+ SY+ +  +T+  +IE         K + + +L L +N L+  P    +  NL+
Sbjct: 162 NLKSLNLSYNQI--KTIPKEIE---------KLQKLQSLGLDNNQLTTLPQEIGQLQNLQ 210

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           SLDLS NR+T LPQ I +   L  L   +N LT   LP ++  LKNL+  NL  N+L   
Sbjct: 211 SLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTI--LPNEIGQLKNLQTLNLRNNRLTTL 268

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
             +I  +  LK L L +N L   P+EI +L  L  L+LG N LT +P+  G L  L+ L 
Sbjct: 269 SKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQTLNLGSNQLTTLPEGIGQLKNLQTLD 328

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  NQL +LP  I  L+ L+ L L+NN+L
Sbjct: 329 LDSNQLTTLPQEIGQLQNLQELFLNNNQL 357



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/168 (37%), Positives = 93/168 (55%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T + L K + N   +++ +LS N+ +  P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 34  TYQDLTKALQNPLKVRILDLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N +  IP     L +L++L L +NQL +LP  I  L+ L+ L L  N+L TL
Sbjct: 94  LRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTL 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  LK     LKSL L  N+++T+P EI  L+ L  L L +N L 
Sbjct: 154 PQEIGQLK----NLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLT 197


>gi|421088203|ref|ZP_15549031.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410003188|gb|EKO53634.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 401

 Score =  124 bits (310), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/227 (38%), Positives = 122/227 (53%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+ FP    +  NL++L LS NR+T LP+ I     L  L    N  T
Sbjct: 92  QNLQELHLSGNQLTTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFT 151

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A   PK++  LKNL+  NL  NQL+  P +I  +  L+ L+L  N L  +  EI +L  L
Sbjct: 152 A--FPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNL 209

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N L  +P   G L  L+ L L++NQ +++P  I  LK L+ L L  N+ +T+P
Sbjct: 210 QVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVP 269

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  LK     L+ L L+NN+ +T+P E   LK L  LSL  N L 
Sbjct: 270 EEIGQLK----NLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLT 312



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 121/224 (54%), Gaps = 7/224 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K P ++  L L    L   P    +  NL+ L+L+NN++  LP+ I     L  L    N
Sbjct: 43  KNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGN 102

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  + PK++  LKNL+   LS N+L   P +I  +  L+ LYL  N     P+EI +L
Sbjct: 103 QLT--TFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQL 160

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L+L  N L  +P+  G L  L  L LS NQL++L A I  L+ L+ L L++N+L+
Sbjct: 161 KNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLK 220

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
           TLP EI  LK     L+ L L+NN+ +T+P EI  LK L  L L
Sbjct: 221 TLPKEIGQLK----NLQMLDLNNNQFKTVPEEIGQLKNLQVLDL 260



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/210 (39%), Positives = 114/210 (54%), Gaps = 7/210 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L   P+   +  NLR L LS N++  L   I     L  L   +N L 
Sbjct: 161 KNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQL- 219

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            ++LPK++  LKNL++ +L+ NQ +  P +I  +  L+ L LG N    VP EI +L  L
Sbjct: 220 -KTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNL 278

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  N    +P+  G L  L+ L L+ NQL +LP  I  LK L+ L L  N+L+TL 
Sbjct: 279 QMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLS 338

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
            EI  LK     LK L L +N+L+TLP EI
Sbjct: 339 AEIGQLK----NLKKLSLRDNQLKTLPKEI 364



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 110/199 (55%), Gaps = 5/199 (2%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A Q++ LPN     + +N+  L L +N L        +  NL+ LDL++N++  LP+ I 
Sbjct: 170 ANQLKTLPNEI--GQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIG 227

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L  L   NN    +++P+++  LKNL+V +L  NQ +  P +I  +  L+ L+L N
Sbjct: 228 QLKNLQMLDLNNN--QFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNN 285

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N    VP E  +L  L +LSL  N LT +P+    L  L  L LS NQL++L A I  LK
Sbjct: 286 NQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLK 345

Query: 219 MLKSLLLHNNKLRTLPTEI 237
            LK L L +N+L+TLP EI
Sbjct: 346 NLKKLSLRDNQLKTLPKEI 364



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 109/203 (53%), Gaps = 5/203 (2%)

Query: 78  FTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           FT +++ +  +   T L +A+ N PL   +   +    ++LPK++  L+NL+V  L+ NQ
Sbjct: 22  FTFVQAEEGKSKAYTDLTKALKN-PLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQ 80

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           L   P +I  +  L+ L+L  N L   P+EI +L  L  L L  N LT +P   G L  L
Sbjct: 81  LATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNL 140

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
             L L+ NQ  + P  I  LK L+ L L+ N+L+TLP EI  L+ L E    L L  N+L
Sbjct: 141 RELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRE----LHLSYNQL 196

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
           +TL  EI  L+ L  L L DN L
Sbjct: 197 KTLSAEIGQLQNLQVLDLNDNQL 219


>gi|421129336|ref|ZP_15589537.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410359532|gb|EKP06630.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 288

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/213 (40%), Positives = 118/213 (55%), Gaps = 5/213 (2%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNL 125
           N L   P       NL+ L L+ N IT LP  I N     +++ N +   E++PK++ NL
Sbjct: 60  NPLKTLPKEIGNLKNLKELSLNTNEITTLPSEIGNLKNLQVLSLN-VNRLETIPKEIGNL 118

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           KNLK  ++  N+L+  P +I ++  LK LYL  N L  +P+EI  L KL  + L  N LT
Sbjct: 119 KNLKELSIGLNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQSMHLSTNELT 178

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
            +P    +L  L  + L DNQ  +LP  I NLK L++L+L  N+L +LP+EI  LK L E
Sbjct: 179 KLPQEIKNLEGLIEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLPSEIGNLKNLKE 238

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
               L L  N+L  LP +I  LK LS LSL  N
Sbjct: 239 ----LYLEENQLTKLPKQIAALKKLSRLSLEGN 267



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/202 (39%), Positives = 116/202 (57%), Gaps = 7/202 (3%)

Query: 81  LRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
           LR  D  +N +  LP+ I N   L  L    N +T  +LP ++ NLKNL+V +L+ N+LE
Sbjct: 52  LRYRDNEDNPLKTLPKEIGNLKNLKELSLNTNEIT--TLPSEIGNLKNLQVLSLNVNRLE 109

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
             P +I ++  LK L +G N L  +P+EI  L  L  L L  N L  +P    +L +L++
Sbjct: 110 TIPKEIGNLKNLKELSIGLNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQS 169

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRT 259
           + LS N+L  LP  I NL+ L  + L++N+  TLP EI  LK     L++L+L  N+L +
Sbjct: 170 MHLSTNELTKLPQEIKNLEGLIEIYLYDNQFTTLPKEIGNLK----NLRNLVLGRNQLIS 225

Query: 260 LPTEIITLKCLSELSLRDNPLV 281
           LP+EI  LK L EL L +N L 
Sbjct: 226 LPSEIGNLKNLKELYLEENQLT 247



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 93/176 (52%), Gaps = 5/176 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLL 113
           +N+  L L  N L   P       NL+ L +  N++  LP+ I N   L  L ++RN L 
Sbjct: 96  KNLQVLSLNVNRLETIPKEIGNLKNLKELSIGLNKLKTLPKEIGNLKNLKELYLSRNQL- 154

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
             + LP+++ NLK L+  +LS N+L + P +I ++  L  +YL +N    +P+EI  L  
Sbjct: 155 --KVLPQEIWNLKKLQSMHLSTNELTKLPQEIKNLEGLIEIYLYDNQFTTLPKEIGNLKN 212

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           L  L LG N L  +P   G+L  L+ L L +NQL  LP  I+ LK L  L L  N+
Sbjct: 213 LRNLVLGRNQLISLPSEIGNLKNLKELYLEENQLTKLPKQIAALKKLSRLSLEGNQ 268



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 45/101 (44%), Positives = 60/101 (59%), Gaps = 4/101 (3%)

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P   G+L  L+ L L+ N++ +LP+ I NLK L+ L L+ N+L T+P EI  LK
Sbjct: 60  NPLKTLPKEIGNLKNLKELSLNTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKEIGNLK 119

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            L E    L +  NKL+TLP EI  LK L EL L  N L +
Sbjct: 120 NLKE----LSIGLNKLKTLPKEIGNLKNLKELYLSRNQLKV 156



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 60/121 (49%), Gaps = 7/121 (5%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           Q+++LP   +N K   + ++ L  N L+  P        L  + L +N+ T LP+ I N 
Sbjct: 153 QLKVLPQEIWNLK--KLQSMHLSTNELTKLPQEIKNLEGLIEIYLYDNQFTTLPKEIGNL 210

Query: 102 P--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
               + ++ RN L+   SLP ++ NLKNLK   L  NQL + P QI  +  L  L L  N
Sbjct: 211 KNLRNLVLGRNQLI---SLPSEIGNLKNLKELYLEENQLTKLPKQIAALKKLSRLSLEGN 267

Query: 160 S 160
            
Sbjct: 268 Q 268


>gi|255089727|ref|XP_002506785.1| predicted protein [Micromonas sp. RCC299]
 gi|226522058|gb|ACO68043.1| predicted protein [Micromonas sp. RCC299]
          Length = 394

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 96/279 (34%), Positives = 136/279 (48%), Gaps = 38/279 (13%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTL----IARNNL 112
           +++ L L  N L+  P    + T+L  L L +N++T +P  I    L++L    ++RN L
Sbjct: 74  SLEELRLDRNQLTSVPAEIGQLTSLEVLYLESNQLTSVPAEIGQ--LASLEVFYLSRNQL 131

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
               SLP ++  L  L+  +L+ NQL   P +I  I  L+ L+L  N L  +P EI +L 
Sbjct: 132 ---TSLPAEIGQLTLLEGLSLARNQLTSVPAEIWQITALEALWLNENQLTSLPAEIGQLT 188

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L LGGN LT +P   G L  LE L L  NQL S+PA I  L  LK L L  N+L +
Sbjct: 189 SLKELGLGGNQLTSVPADIGQLTLLEGLSLDSNQLTSVPAEIGQLASLKFLHLQGNQLAS 248

Query: 233 LPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           +P EI  L  L                      LK L+L  N+L ++P EI  L  L  L
Sbjct: 249 VPAEIGQLTLLEGLNLESNQLTSVPAEIGQLASLKRLILSRNQLTSVPAEIGQLSSLDGL 308

Query: 274 SLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQ 312
           +L  N         +T  P  + +LAS  LK+  + Y+Q
Sbjct: 309 NLERN--------QLTSVPAEIGQLAS--LKLLHLSYNQ 337



 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 91/250 (36%), Positives = 127/250 (50%), Gaps = 15/250 (6%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAE 116
           ++ L L  N L+  P    + T L +L L+ N++T LP  I     L  L    N LT  
Sbjct: 144 LEGLSLARNQLTSVPAEIWQITALEALWLNENQLTSLPAEIGQLTSLKELGLGGNQLT-- 201

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           S+P D+  L  L+  +L  NQL   P +I  + +LK+L+L  N L  VP EI +L  L  
Sbjct: 202 SVPADIGQLTLLEGLSLDSNQLTSVPAEIGQLASLKFLHLQGNQLASVPAEIGQLTLLEG 261

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+L  N LT +P   G L  L+ LILS NQL S+PA I  L  L  L L  N+L ++P E
Sbjct: 262 LNLESNQLTSVPAEIGQLASLKRLILSRNQLTSVPAEIGQLSSLDGLNLERNQLTSVPAE 321

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
           I  L  L    K L L  N+L ++P EI  L  L  L L +N        ++T  P ++ 
Sbjct: 322 IGQLASL----KLLHLSYNQLTSVPAEIWQLASLEWLWLNNN--------ELTSVPAAIR 369

Query: 297 ELASRTLKVH 306
           EL +   +V+
Sbjct: 370 ELRAAGCRVY 379



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 89/164 (54%), Gaps = 4/164 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++P ++  L  L+  NL  NQL   P +I  + +L+ L L  N L  VP EI +L  L V
Sbjct: 41  AVPAELGRLSALRKLNLGRNQLTSVPAEIGQLTSLEELRLDRNQLTSVPAEIGQLTSLEV 100

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N LT +P   G L  LE   LS NQL SLPA I  L +L+ L L  N+L ++P E
Sbjct: 101 LYLESNQLTSVPAEIGQLASLEVFYLSRNQLTSLPAEIGQLTLLEGLSLARNQLTSVPAE 160

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  +      L++L L+ N+L +LP EI  L  L EL L  N L
Sbjct: 161 IWQITA----LEALWLNENQLTSLPAEIGQLTSLKELGLGGNQL 200



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/230 (33%), Positives = 109/230 (47%), Gaps = 36/230 (15%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKV 130
            P    + + LR L+L  N++T                        S+P ++  L +L+ 
Sbjct: 42  VPAELGRLSALRKLNLGRNQLT------------------------SVPAEIGQLTSLEE 77

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
             L  NQL   P +I  + +L+ LYL +N L  VP EI +L  L V  L  N LT +P  
Sbjct: 78  LRLDRNQLTSVPAEIGQLTSLEVLYLESNQLTSVPAEIGQLASLEVFYLSRNQLTSLPAE 137

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
            G L  LE L L+ NQL S+PA I  +  L++L L+ N+L +LP EI  L      LK L
Sbjct: 138 IGQLTLLEGLSLARNQLTSVPAEIWQITALEALWLNENQLTSLPAEIGQLTS----LKEL 193

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELAS 300
            L  N+L ++P +I  L  L  LSL  N         +T  P  + +LAS
Sbjct: 194 GLGGNQLTSVPADIGQLTLLEGLSLDSN--------QLTSVPAEIGQLAS 235


>gi|255087408|ref|XP_002505627.1| predicted protein [Micromonas sp. RCC299]
 gi|226520897|gb|ACO66885.1| predicted protein [Micromonas sp. RCC299]
          Length = 573

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/214 (38%), Positives = 114/214 (53%), Gaps = 7/214 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           +++ L L+ N L+  P    + T LR L L+ NR+  +P  I     L  L   +N LT 
Sbjct: 52  SLEGLRLFGNQLTSVPAEIGQLTALRELSLAANRLMSVPAEIGQLTSLRELNLNSNQLT- 110

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            ++P ++  L +L+   L GN+L   P +I  + +L  L LG N    VP EI +L  L 
Sbjct: 111 -NVPAEIGQLTSLEGLRLYGNRLTSVPEEIGQLTSLVVLVLGGNQFTSVPAEIGQLTALR 169

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L GN LT +P   G L  L  L LS NQL S+PA I  L +LK L L+ N+L +LP 
Sbjct: 170 ELRLDGNRLTSVPAEIGQLTSLGELSLSGNQLTSVPAEIGQLTLLKGLELYYNQLTSLPA 229

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           EI  L      L+ LLL NN+L ++P EI  L+ 
Sbjct: 230 EIGQLTS----LEHLLLDNNQLTSVPAEIRELRA 259



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 84/220 (38%), Positives = 114/220 (51%), Gaps = 9/220 (4%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTAESLPK 120
           L+ N L+  P    + T+L  L L  N++T +P  I     L  L +A N L+   S+P 
Sbjct: 35  LHGNELTSLPAEIGQLTSLEGLRLFGNQLTSVPAEIGQLTALRELSLAANRLM---SVPA 91

Query: 121 DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
           ++  L +L+  NL+ NQL   P +I  + +L+ L L  N L  VP EI +L  L VL LG
Sbjct: 92  EIGQLTSLRELNLNSNQLTNVPAEIGQLTSLEGLRLYGNRLTSVPEEIGQLTSLVVLVLG 151

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           GN  T +P   G L  L  L L  N+L S+PA I  L  L  L L  N+L ++P EI  L
Sbjct: 152 GNQFTSVPAEIGQLTALRELRLDGNRLTSVPAEIGQLTSLGELSLSGNQLTSVPAEIGQL 211

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             L    K L L+ N+L +LP EI  L  L  L L +N L
Sbjct: 212 TLL----KGLELYYNQLTSLPAEIGQLTSLEHLLLDNNQL 247



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 88/273 (32%), Positives = 125/273 (45%), Gaps = 38/273 (13%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L  NNL+  P    + T+L +  LS+N++T +P  I     L  L   +N L   S+P
Sbjct: 308 LQLGGNNLTSVPAEIGQLTSLMTFGLSDNKLTSVPAEIGQLTSLEVLYLDHNRLA--SMP 365

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPR------------- 166
            ++  L +L    LS N+L   P +I  + +LK L+L  N L  VP              
Sbjct: 366 AEIGRLTSLTTLFLSSNRLTSVPAEIGQLTSLKGLHLSRNQLTSVPAAIRDLRAAGCRLE 425

Query: 167 ----------EINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
                     EI  L  L +L L GN LT +P   G L  LE L LS N+L S+P  I  
Sbjct: 426 DCDLTGLLPAEIGCLGALRLLQLAGNELTSVPAEIGQLTSLEVLELSRNKLTSVPVEIGQ 485

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           L  L+ L L +N+L +LP EI  L  L    K L L +N+L ++P EI  L  L    L+
Sbjct: 486 LTSLERLYLSSNRLTSLPAEIGQLTSL----KRLYLDHNQLTSVPAEIGQLAALQWFDLQ 541

Query: 277 DNPLVIRFVSDMTYKPPSLLELASRTLKVHEID 309
            N        ++T  P  + +L    L+   +D
Sbjct: 542 RN--------ELTSVPAEIGQLLRGRLRSWNVD 566



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 113/249 (45%), Gaps = 36/249 (14%)

Query: 46  LPNNDYNKKPENID------TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L  N+    P  I       T  L  N L+  P    + T+L  L L +NR+  +P  I 
Sbjct: 310 LGGNNLTSVPAEIGQLTSLMTFGLSDNKLTSVPAEIGQLTSLEVLYLDHNRLASMPAEIG 369

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDI---------- 148
               L+TL   +N LT  S+P ++  L +LK  +LS NQL   P  I D+          
Sbjct: 370 RLTSLTTLFLSSNRLT--SVPAEIGQLTSLKGLHLSRNQLTSVPAAIRDLRAAGCRLEDC 427

Query: 149 -------------PTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLY 195
                          L+ L L  N L  VP EI +L  L VL L  N LT +P   G L 
Sbjct: 428 DLTGLLPAEIGCLGALRLLQLAGNELTSVPAEIGQLTSLEVLELSRNKLTSVPVEIGQLT 487

Query: 196 QLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNN 255
            LE L LS N+L SLPA I  L  LK L L +N+L ++P EI  L      L+   L  N
Sbjct: 488 SLERLYLSSNRLTSLPAEIGQLTSLKRLYLDHNQLTSVPAEIGQLAA----LQWFDLQRN 543

Query: 256 KLRTLPTEI 264
           +L ++P EI
Sbjct: 544 ELTSVPAEI 552



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 98/212 (46%), Gaps = 28/212 (13%)

Query: 69  SFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNL 128
              P    + + LR L L  N +T LP  I                       +++L+ L
Sbjct: 18  GVVPAELGRLSALRKLSLHGNELTSLPAEI---------------------GQLTSLEGL 56

Query: 129 KVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
           ++F   GNQL   P +I  +  L+ L L  N L  VP EI +L  L  L+L  N LT++P
Sbjct: 57  RLF---GNQLTSVPAEIGQLTALRELSLAANRLMSVPAEIGQLTSLRELNLNSNQLTNVP 113

Query: 189 DTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLK 248
              G L  LE L L  N+L S+P  I  L  L  L+L  N+  ++P EI  L  L E   
Sbjct: 114 AEIGQLTSLEGLRLYGNRLTSVPEEIGQLTSLVVLVLGGNQFTSVPAEIGQLTALRE--- 170

Query: 249 SLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            L L  N+L ++P EI  L  L ELSL  N L
Sbjct: 171 -LRLDGNRLTSVPAEIGQLTSLGELSLSGNQL 201



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/234 (33%), Positives = 109/234 (46%), Gaps = 20/234 (8%)

Query: 46  LPNNDYNKKPENID--TLL----LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L  N     P  I   TLL    LY+N L+  P    + T+L  L L NN++T +P  I 
Sbjct: 196 LSGNQLTSVPAEIGQLTLLKGLELYYNQLTSLPAEIGQLTSLEHLLLDNNQLTSVPAEIR 255

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKV----FNLSGNQLEQFPIQILDIPTLKYLY 155
               +    R +L         M N + +K+    F L G      P ++  +  L++L 
Sbjct: 256 ELRAAG--CRVDLDDGHWEGVTMENGRVVKLDLVEFGLIG----ALPAEVGRLSALRWLQ 309

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           LG N+L  VP EI +L  L    L  N LT +P   G L  LE L L  N+L S+PA I 
Sbjct: 310 LGGNNLTSVPAEIGQLTSLMTFGLSDNKLTSVPAEIGQLTSLEVLYLDHNRLASMPAEIG 369

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
            L  L +L L +N+L ++P EI  L      LK L L  N+L ++P  I  L+ 
Sbjct: 370 RLTSLTTLFLSSNRLTSVPAEIGQLTS----LKGLHLSRNQLTSVPAAIRDLRA 419


>gi|418678790|ref|ZP_13240064.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400321980|gb|EJO69840.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 379

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 91/226 (40%), Positives = 122/226 (53%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L+  P    K  NL+ L+L  NR+T LP  +     L  L    N LT
Sbjct: 94  QNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLT 153

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP+ +  L+NL+V NL  N+L   P +I  +  L+ L L  N L  +P +I +L  L
Sbjct: 154 I--LPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNL 211

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L+  GN LT  P   G L +L+ L L  NQL +LP  I  LK L+ L L NN LRTLP
Sbjct: 212 QILNSQGNQLTTFPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLP 271

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L    +KL++L L  N++ T P EI  L+ L EL+L  N L
Sbjct: 272 KEIEQL----QKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQL 313



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 87/227 (38%), Positives = 123/227 (54%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P+   +  NL+ L+L  N++T LP+ I     L  L    N LT
Sbjct: 140 QNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLT 199

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP+ +  L+NL++ N  GNQL  FP +I  +  L+ LYL  N L  +P EI +L KL
Sbjct: 200 I--LPEKIGQLQNLQILNSQGNQLTTFPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKL 257

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L LG N L  +P     L +L+ L L  NQ+ + P  I  L+ L+ L L  N+L TLP
Sbjct: 258 QELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFPKEIGQLQNLQELNLGFNQLTTLP 317

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L+ L E    L L  N+L TLP E+  L+ L +L+L +NP+ 
Sbjct: 318 QEIGQLQNLQE----LNLEFNQLATLPKEVGQLQKLRKLNLYNNPIA 360



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/226 (39%), Positives = 121/226 (53%), Gaps = 7/226 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L +N L+  P+   +  NL+ LDL +N +T LP+ I     L  L    N 
Sbjct: 69  KLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQVLNLGFNR 128

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT   LP ++  L+NL+V NL  N+L   P +I  +  L+ L L  N L  +P +I +L 
Sbjct: 129 LTI--LPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQ 186

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L VL+L  N LT +P+  G L  L+ L    NQL + P  I  L  L+ L L+ N+L T
Sbjct: 187 NLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLSKLQKLYLYGNQLTT 246

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           LP EI  LK    KL+ L L NN LRTLP EI  L+ L  L L  N
Sbjct: 247 LPEEIGQLK----KLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGN 288



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 87/227 (38%), Positives = 120/227 (52%), Gaps = 7/227 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P++   L L  + L+       K  NL+ L L+ N++T LP  I     L  L   +N L
Sbjct: 47  PKDARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNEL 106

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++  L+NL+V NL  N+L   P ++  +  L+ L L  N L  +P +I +L  
Sbjct: 107 TI--LPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQN 164

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L VL+L  N LT +P+  G L  L+ L L  N+L  LP  I  L+ L+ L    N+L T 
Sbjct: 165 LQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTF 224

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P EI  L     KL+ L L+ N+L TLP EI  LK L EL L +NPL
Sbjct: 225 PKEIGQL----SKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPL 267


>gi|398341355|ref|ZP_10526058.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 401

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/227 (38%), Positives = 122/227 (53%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+ FP    +  NL++L LS NR+T LP+ I     L  L    N  T
Sbjct: 92  QNLQELHLSGNQLTTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFT 151

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A   PK++  LKNL+  NL  NQL+  P +I  +  L+ L+L  N L  +  EI +L  L
Sbjct: 152 A--FPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNL 209

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N L  +P   G L  L+ L L++NQ +++P  I  LK L+ L L  N+ +T+P
Sbjct: 210 QVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVP 269

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  LK     L+ L L+NN+ +T+P E   LK L  LSL  N L 
Sbjct: 270 EEIGQLK----NLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLT 312



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 121/224 (54%), Gaps = 7/224 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K P ++  L L    L   P    +  NL+ L+L+NN++  LP+ I     L  L    N
Sbjct: 43  KNPLDVRVLDLNEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGN 102

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  + PK++  LKNL+   LS N+L   P +I  +  L+ LYL  N     P+EI +L
Sbjct: 103 QLT--TFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQL 160

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L+L  N L  +P+  G L  L  L LS NQL++L A I  L+ L+ L L++N+L+
Sbjct: 161 KNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLK 220

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
           TLP EI  LK     L+ L L+NN+ +T+P EI  LK L  L L
Sbjct: 221 TLPKEIGQLK----NLQMLDLNNNQFKTVPEEIGQLKNLQVLDL 260



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 82/210 (39%), Positives = 114/210 (54%), Gaps = 7/210 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L   P+   +  NLR L LS N++  L   I     L  L   +N L 
Sbjct: 161 KNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQL- 219

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            ++LPK++  LKNL++ +L+ NQ +  P +I  +  L+ L LG N    VP EI +L  L
Sbjct: 220 -KTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNL 278

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  N    +P+  G L  L+ L L+ NQL +LP  I  LK L+ L L  N+L+TL 
Sbjct: 279 QMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLS 338

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
            EI  LK     LK L L +N+L+TLP EI
Sbjct: 339 AEIGQLK----NLKKLSLRDNQLKTLPKEI 364



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 75/199 (37%), Positives = 110/199 (55%), Gaps = 5/199 (2%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A Q++ LPN     + +N+  L L +N L        +  NL+ LDL++N++  LP+ I 
Sbjct: 170 ANQLKTLPNEI--GQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIG 227

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L  L   NN    +++P+++  LKNL+V +L  NQ +  P +I  +  L+ L+L N
Sbjct: 228 QLKNLQMLDLNNN--QFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNLQMLFLNN 285

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N    VP E  +L  L +LSL  N LT +P+    L  L  L LS NQL++L A I  LK
Sbjct: 286 NQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLK 345

Query: 219 MLKSLLLHNNKLRTLPTEI 237
            LK L L +N+L+TLP EI
Sbjct: 346 NLKKLSLRDNQLKTLPKEI 364



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/203 (37%), Positives = 109/203 (53%), Gaps = 5/203 (2%)

Query: 78  FTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           FT +++ +  +   T L +A+ N PL   +   N    ++LPK++  L+NL+V  L+ NQ
Sbjct: 22  FTFVQAEEGKSKAYTDLTKALKN-PLDVRVLDLNEQKLKTLPKEIGQLQNLQVLELNNNQ 80

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           L   P +I  +  L+ L+L  N L   P+EI +L  L  L L  N LT +P   G L  L
Sbjct: 81  LATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNL 140

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
             L L+ NQ  + P  I  LK L+ L L+ N+L+TLP EI  L+ L E    L L  N+L
Sbjct: 141 RELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRE----LHLSYNQL 196

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
           +TL  EI  L+ L  L L DN L
Sbjct: 197 KTLSAEIGQLQNLQVLDLNDNQL 219


>gi|418744843|ref|ZP_13301188.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794174|gb|EKR92084.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 511

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 93/226 (41%), Positives = 125/226 (55%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           + ++ L L +N L   P+   K   L  L+L NN++  L Q I     L  L   NN LT
Sbjct: 84  QKLEWLSLKNNRLESLPNKIGKLRKLEHLNLENNQLAVLVQEIGTLQKLEWLSLENNQLT 143

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP+++  L+ L+  +LS NQL   P +I  + +L+YL L NN L  +P+EI KL KL
Sbjct: 144 V--LPQEIGKLQKLEKLDLSDNQLATLPNEIGQLESLQYLSLVNNRLKTLPKEIWKLQKL 201

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L LG N    +P     L  LE L +S+NQL +LP  I  L+ LK L L +N+L  LP
Sbjct: 202 KRLYLGDNQFRTLPKEIDQLQNLEDLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTVLP 261

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L    E L SL+L NN+L TLP EI TL+ L  L+L +N L
Sbjct: 262 QEIGQL----ENLDSLILSNNQLTTLPQEIGTLQKLQYLNLSNNQL 303



 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 123/228 (53%), Gaps = 7/228 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K + +  L L  N     P    +  NL  LD+SNN++  LP  I     L  L   +N 
Sbjct: 197 KLQKLKRLYLGDNQFRTLPKEIDQLQNLEDLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQ 256

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT   LP+++  L+NL    LS NQL   P +I  +  L+YL L NN L  +P+EI  L 
Sbjct: 257 LTV--LPQEIGQLENLDSLILSNNQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGTLQ 314

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           +L  L+L  N L  +P     L  LE L LS+N+L++LP  I  L+ L+ L L +  L T
Sbjct: 315 ELEWLNLEHNQLAALPQEIDQLQNLEDLNLSNNRLKTLPKGIWKLQRLEWLYLEHAHLTT 374

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           LP EI TL    +KL+ L L NN+L+TLP EI  L+ L  L L++N L
Sbjct: 375 LPNEIGTL----QKLQRLFLSNNRLKTLPKEIWKLRKLEWLYLKNNKL 418



 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 94/234 (40%), Positives = 125/234 (53%), Gaps = 7/234 (2%)

Query: 50  DYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIA 108
           D  K P N+  L L  N L   P+   K  NL  L+L NN++  L Q I     L  L  
Sbjct: 32  DALKNPMNVRILDLSDNLLITLPNEIGKLENLEKLNLVNNQLAVLVQEIGTLQKLEWLSL 91

Query: 109 RNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREI 168
           +NN L  ESLP  +  L+ L+  NL  NQL     +I  +  L++L L NN L  +P+EI
Sbjct: 92  KNNRL--ESLPNKIGKLRKLEHLNLENNQLAVLVQEIGTLQKLEWLSLENNQLTVLPQEI 149

Query: 169 NKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
            KL KL  L L  N L  +P+  G L  L+ L L +N+L++LP  I  L+ LK L L +N
Sbjct: 150 GKLQKLEKLDLSDNQLATLPNEIGQLESLQYLSLVNNRLKTLPKEIWKLQKLKRLYLGDN 209

Query: 229 KLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           + RTLP EI  L    + L+ L + NN+L TLP EI  L+ L  L L DN L +
Sbjct: 210 QFRTLPKEIDQL----QNLEDLDVSNNQLVTLPNEIWKLQNLKWLYLDDNQLTV 259



 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/220 (41%), Positives = 123/220 (55%), Gaps = 11/220 (5%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           +YH+    F D      N+R LDLS+N +  LP  I     L  L   NN L    L ++
Sbjct: 26  VYHD----FSDALKNPMNVRILDLSDNLLITLPNEIGKLENLEKLNLVNNQLAV--LVQE 79

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L+ L+  +L  N+LE  P +I  +  L++L L NN L  + +EI  L KL  LSL  
Sbjct: 80  IGTLQKLEWLSLKNNRLESLPNKIGKLRKLEHLNLENNQLAVLVQEIGTLQKLEWLSLEN 139

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N LT +P   G L +LE L LSDNQL +LP  I  L+ L+ L L NN+L+TLP EI  L 
Sbjct: 140 NQLTVLPQEIGKLQKLEKLDLSDNQLATLPNEIGQLESLQYLSLVNNRLKTLPKEIWKL- 198

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
              +KLK L L +N+ RTLP EI  L+ L +L + +N LV
Sbjct: 199 ---QKLKRLYLGDNQFRTLPKEIDQLQNLEDLDVSNNQLV 235



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 84/211 (39%), Positives = 116/211 (54%), Gaps = 7/211 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           EN+D+L+L +N L+  P        L+ L+LSNN++  LPQ I     L  L   +N L 
Sbjct: 268 ENLDSLILSNNQLTTLPQEIGTLQKLQYLNLSNNQLRTLPQEIGTLQELEWLNLEHNQLA 327

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  LP+++  L+NL+  NLS N+L+  P  I  +  L++LYL +  L  +P EI  L KL
Sbjct: 328 A--LPQEIDQLQNLEDLNLSNNRLKTLPKGIWKLQRLEWLYLEHAHLTTLPNEIGTLQKL 385

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P     L +LE L L +N+L SLP  I  L+ L+ L L NN+LRTLP
Sbjct: 386 QRLFLSNNRLKTLPKEIWKLRKLEWLYLKNNKLGSLPKEIDQLQNLEYLDLSNNQLRTLP 445

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
            EI  L+ L +    L L  N   T P EI+
Sbjct: 446 NEIGQLQSLED----LDLSGNPFTTFPQEIV 472



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 44/120 (36%), Positives = 61/120 (50%), Gaps = 4/120 (3%)

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           D  D   +   +  L LSDN L +LP  I  L+ L+ L L NN+L  L  EI TL    +
Sbjct: 29  DFSDALKNPMNVRILDLSDNLLITLPNEIGKLENLEKLNLVNNQLAVLVQEIGTL----Q 84

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKV 305
           KL+ L L NN+L +LP +I  L+ L  L+L +N L +      T +    L L +  L V
Sbjct: 85  KLEWLSLKNNRLESLPNKIGKLRKLEHLNLENNQLAVLVQEIGTLQKLEWLSLENNQLTV 144


>gi|421090532|ref|ZP_15551324.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000746|gb|EKO51374.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 288

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 86/213 (40%), Positives = 118/213 (55%), Gaps = 5/213 (2%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNL 125
           N L   P       NL+ L L+ N IT LP  I N     +++ N +   E++PK++ NL
Sbjct: 60  NPLKTLPKEIGNLKNLKELSLNTNEITTLPSEIGNLKNLQVLSLN-VNRLETIPKEIGNL 118

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           KNLK  ++  N+L+  P +I ++  LK LYL  N L  +P+EI  L KL  + L  N LT
Sbjct: 119 KNLKELSIGLNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQRMHLSTNELT 178

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
            +P    +L  L  + L DNQ  +LP  I NLK L++L+L  N+L +LP+EI  LK L E
Sbjct: 179 KLPQEIKNLEGLIEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLPSEIGNLKNLKE 238

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
               L L  N+L  LP +I  LK LS LSL  N
Sbjct: 239 ----LYLEENQLTKLPKQIAALKKLSRLSLEGN 267



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 80/202 (39%), Positives = 115/202 (56%), Gaps = 7/202 (3%)

Query: 81  LRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
           LR  D  +N +  LP+ I N   L  L    N +T  +LP ++ NLKNL+V +L+ N+LE
Sbjct: 52  LRYRDNEDNPLKTLPKEIGNLKNLKELSLNTNEIT--TLPSEIGNLKNLQVLSLNVNRLE 109

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
             P +I ++  LK L +G N L  +P+EI  L  L  L L  N L  +P    +L +L+ 
Sbjct: 110 TIPKEIGNLKNLKELSIGLNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQR 169

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRT 259
           + LS N+L  LP  I NL+ L  + L++N+  TLP EI  LK     L++L+L  N+L +
Sbjct: 170 MHLSTNELTKLPQEIKNLEGLIEIYLYDNQFTTLPKEIGNLK----NLRNLVLGRNQLIS 225

Query: 260 LPTEIITLKCLSELSLRDNPLV 281
           LP+EI  LK L EL L +N L 
Sbjct: 226 LPSEIGNLKNLKELYLEENQLT 247



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 93/176 (52%), Gaps = 5/176 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLL 113
           +N+  L L  N L   P       NL+ L +  N++  LP+ I N   L  L ++RN L 
Sbjct: 96  KNLQVLSLNVNRLETIPKEIGNLKNLKELSIGLNKLKTLPKEIGNLKNLKELYLSRNQL- 154

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
             + LP+++ NLK L+  +LS N+L + P +I ++  L  +YL +N    +P+EI  L  
Sbjct: 155 --KVLPQEIWNLKKLQRMHLSTNELTKLPQEIKNLEGLIEIYLYDNQFTTLPKEIGNLKN 212

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           L  L LG N L  +P   G+L  L+ L L +NQL  LP  I+ LK L  L L  N+
Sbjct: 213 LRNLVLGRNQLISLPSEIGNLKNLKELYLEENQLTKLPKQIAALKKLSRLSLEGNQ 268



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 45/101 (44%), Positives = 60/101 (59%), Gaps = 4/101 (3%)

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P   G+L  L+ L L+ N++ +LP+ I NLK L+ L L+ N+L T+P EI  LK
Sbjct: 60  NPLKTLPKEIGNLKNLKELSLNTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKEIGNLK 119

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            L E    L +  NKL+TLP EI  LK L EL L  N L +
Sbjct: 120 NLKE----LSIGLNKLKTLPKEIGNLKNLKELYLSRNQLKV 156



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 40/121 (33%), Positives = 59/121 (48%), Gaps = 7/121 (5%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           Q+++LP   +N K   +  + L  N L+  P        L  + L +N+ T LP+ I N 
Sbjct: 153 QLKVLPQEIWNLK--KLQRMHLSTNELTKLPQEIKNLEGLIEIYLYDNQFTTLPKEIGNL 210

Query: 102 P--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
               + ++ RN L+   SLP ++ NLKNLK   L  NQL + P QI  +  L  L L  N
Sbjct: 211 KNLRNLVLGRNQLI---SLPSEIGNLKNLKELYLEENQLTKLPKQIAALKKLSRLSLEGN 267

Query: 160 S 160
            
Sbjct: 268 Q 268


>gi|455790671|gb|EMF42524.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 267

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/250 (36%), Positives = 127/250 (50%), Gaps = 7/250 (2%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           L   P     F NL  L+L  N++T LP+ I     L  L    N  T  SLPK++  L+
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFT--SLPKEIGQLQ 63

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL+  +L+GNQL   P +I  +  L+ L L  N    +P+EI +L  L  L L GN  T 
Sbjct: 64  NLERLDLAGNQLASLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTS 123

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P   G L +LEAL L  N+    P  I   + LK L L  ++L+TLP EI+ L    + 
Sbjct: 124 LPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLL----QN 179

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVH 306
           L+SL L  N+L +LP EI  L+ L EL+L+DN L          +   +L L S +  + 
Sbjct: 180 LQSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLK 239

Query: 307 EIDYSQEHLP 316
           E    QE LP
Sbjct: 240 EKQKIQELLP 249



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 88/229 (38%), Positives = 123/229 (53%), Gaps = 7/229 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N L+  P    +  NLR L+L+ N+ T LP+ I     L  L    N L 
Sbjct: 17  QNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQLA 76

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLPK++  L+NL+V NL+GNQ    P +I  +  L+ L L  N    +P+EI +L KL
Sbjct: 77  --SLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKL 134

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N  T  P        L+ L LS +QL++LP  I  L+ L+SL L  N+L +LP
Sbjct: 135 EALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSLP 194

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
            EI  L+ L E    L L +NKL+TLP EI  L+ L  L L  N   ++
Sbjct: 195 KEIGQLQNLFE----LNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLK 239



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 63/123 (51%), Gaps = 4/123 (3%)

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           +G + L  +PR I     L  L+L GN LT +P   G L  L  L L+ NQ  SLP  I 
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            L+ L+ L L  N+L +LP EI  L    + L+ L L  N+  +LP EI  L+ L  L L
Sbjct: 61  QLQNLERLDLAGNQLASLPKEIGQL----QNLRVLNLAGNQFTSLPKEIGQLQNLERLDL 116

Query: 276 RDN 278
             N
Sbjct: 117 AGN 119


>gi|456823284|gb|EMF71754.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 455

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 120/381 (31%), Positives = 186/381 (48%), Gaps = 67/381 (17%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           +++ LD S++SL   TL  ++  L         EN+  L L+ N L+  P    +  NL+
Sbjct: 95  NLQELDLSFNSLT--TLPKEVGQL---------ENLQRLDLHQNRLATLPMEIGQLKNLQ 143

Query: 83  SLDLSNNRITHLPQAI----------------TNFP-----LSTLIARNNLLTA-ESLPK 120
            LDL++N++T LP+ I                T  P     L  L   N+++T   +LPK
Sbjct: 144 ELDLNSNKLTTLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTLNSIVTQLTTLPK 203

Query: 121 DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
           ++  L+NLK  NL  NQL   P +I ++  L+ L L  N +  +P+EI +L  L  L L 
Sbjct: 204 EIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEIGQLQNLQWLDLH 263

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
            N LT +P   G L  L+ L L  NQL +LP  I  L+ L+ L L  N+L TLP EI  L
Sbjct: 264 QNQLTTLPKEIGQLQNLQRLDLHQNQLTTLPKEIGQLQNLQELCLDENQLTTLPKEIEQL 323

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL--------------VIRFVS 286
               + L+ L L NN+L TLP E++ L+ L  L+L  N L              V+  +S
Sbjct: 324 ----QNLRVLDLDNNQLTTLPKEVLRLQSLQVLALGSNRLSTLPKEIGQLQNLQVLGLIS 379

Query: 287 D-MTYKPPSLLELASRTLKVHEIDYSQEHL---PQNLVQY--LESAHHCVNP----KCKG 336
           + +T  P  + +L +    + E+   +  L   P+ + Q   L+  H  +NP    + KG
Sbjct: 380 NQLTTLPKEIGQLQN----LQELCLDENQLTTFPKEIRQLKNLQELHLYLNPLSSKEKKG 435

Query: 337 VFFDNRIEHIKFVDFCGKYRI 357
             F++  +++KF+     YRI
Sbjct: 436 --FEDYFQNVKFILKNIIYRI 454



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 100/307 (32%), Positives = 143/307 (46%), Gaps = 45/307 (14%)

Query: 3   YNYGSSSSSDSSDSDSFKTVS----IKTLDFSYSSLDSETLATQIELLPNNDYNKKPENI 58
           Y   +  S   + +D  K +     ++TLD  Y  L          +LP      + EN+
Sbjct: 25  YELQAEESESGTYTDLAKALQNPLKVRTLDLRYQKLT---------ILPKEI--GQLENL 73

Query: 59  DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP---------------- 102
             L L    L+  P    +  NL+ LDLS N +T LP+ +                    
Sbjct: 74  QRLNLNSQKLTTLPKEIGQLRNLQELDLSFNSLTTLPKEVGQLENLQRLDLHQNRLATLP 133

Query: 103 --------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYL 154
                   L  L   +N LT  +LPK++  L+NL+  +L  NQL   P +I  +  LK L
Sbjct: 134 MEIGQLKNLQELDLNSNKLT--TLPKEIRQLRNLQELDLHRNQLTTLPKEIGQLQNLKTL 191

Query: 155 YLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASI 214
                 L  +P+EI +L  L  L+L  N LT +P   G+L  LE L+L +N++ +LP  I
Sbjct: 192 NSIVTQLTTLPKEIGELQNLKTLNLLDNQLTTLPKEIGELQNLEILVLRENRITALPKEI 251

Query: 215 SNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
             L+ L+ L LH N+L TLP EI  L    + L+ L LH N+L TLP EI  L+ L EL 
Sbjct: 252 GQLQNLQWLDLHQNQLTTLPKEIGQL----QNLQRLDLHQNQLTTLPKEIGQLQNLQELC 307

Query: 275 LRDNPLV 281
           L +N L 
Sbjct: 308 LDENQLT 314


>gi|421129189|ref|ZP_15589392.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410359579|gb|EKP06671.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 400

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 88/227 (38%), Positives = 124/227 (54%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+ FP    +  NL++L LS NR+T LP+ I     L  L    N L 
Sbjct: 92  QNLQELHLSGNQLTTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQL- 150

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            ++LPK++  LKNL+  NL  NQL+  P +I  +  L+ L+L  N L  +  EI +L  L
Sbjct: 151 -KTLPKEIGQLKNLQQLNLYANQLKTLPKEIGQLQNLRELHLSYNQLKTLSAEIGQLQNL 209

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N L  +P   G L  L+ L L++NQ +++P  I  LK L+ L L  N+ +T+P
Sbjct: 210 QVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVP 269

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  LK     L+ L L+NN+ +T+P E   LK L  LSL  N L 
Sbjct: 270 EEIGQLK----NLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLT 312



 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/227 (38%), Positives = 123/227 (54%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L   P    +  NL+ L+L  N++  LP+ I     L  L    N L 
Sbjct: 138 KNLRELYLNTNQLKTLPKEIGQLKNLQQLNLYANQLKTLPKEIGQLQNLRELHLSYNQL- 196

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            ++L  ++  L+NL+V +L+ NQL+  P +I  +  L+ L L NN    VP EI +L  L
Sbjct: 197 -KTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNL 255

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL LG N    +P+  G L  L+ L L++NQ +++P     LK L+ L L+ N+L TLP
Sbjct: 256 QVLDLGYNQFKTVPEEIGQLKNLQMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLP 315

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  LK L E    L L  N+L+TL  EI  LK L +LSLRDN L 
Sbjct: 316 NEIRQLKNLRE----LHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLT 358



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 87/224 (38%), Positives = 122/224 (54%), Gaps = 7/224 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K P ++  L L    L   P    +  NL+ L+L+NN++  LP+ I     L  L    N
Sbjct: 43  KNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLQNLQELHLSGN 102

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  + PK++  LKNL+   LS N+L   P +I  +  L+ LYL  N L  +P+EI +L
Sbjct: 103 QLT--TFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQLKTLPKEIGQL 160

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L+L  N L  +P   G L  L  L LS NQL++L A I  L+ L+ L L++N+L+
Sbjct: 161 KNLQQLNLYANQLKTLPKEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLK 220

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
           TLP EI  LK     L+ L L+NN+ +T+P EI  LK L  L L
Sbjct: 221 TLPKEIGQLK----NLQMLDLNNNQFKTVPEEIGQLKNLQVLDL 260



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 82/210 (39%), Positives = 112/210 (53%), Gaps = 7/210 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L   P    +  NLR L LS N++  L   I     L  L   +N L 
Sbjct: 161 KNLQQLNLYANQLKTLPKEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQL- 219

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            ++LPK++  LKNL++ +L+ NQ +  P +I  +  L+ L LG N    VP EI +L  L
Sbjct: 220 -KTLPKEIGQLKNLQMLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVPEEIGQLKNL 278

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  N    +P+  G L  L+ L L+ NQL +LP  I  LK L+ L L  N+L+TL 
Sbjct: 279 QMLFLNNNQFKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLS 338

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
            EI  LK     LK L L +N+L TLP EI
Sbjct: 339 AEIGQLK----NLKKLSLRDNQLTTLPKEI 364



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/203 (38%), Positives = 112/203 (55%), Gaps = 5/203 (2%)

Query: 78  FTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           FT +++ +  +   T L +A+ N PL   +   +    ++LPK++  L+NL+V  L+ NQ
Sbjct: 22  FTFVQAEEGKSKAYTDLTKALKN-PLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQ 80

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           L   P +I  +  L+ L+L  N L   P+EI +L  L  L L  N LT +P   G L  L
Sbjct: 81  LATLPKEIGQLQNLQELHLSGNQLTTFPKEIGQLKNLQTLVLSKNRLTTLPKEIGQLKNL 140

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
             L L+ NQL++LP  I  LK L+ L L+ N+L+TLP EI  L+ L E    L L  N+L
Sbjct: 141 RELYLNTNQLKTLPKEIGQLKNLQQLNLYANQLKTLPKEIGQLQNLRE----LHLSYNQL 196

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
           +TL  EI  L+ L  L L DN L
Sbjct: 197 KTLSAEIGQLQNLQVLDLNDNQL 219


>gi|153869391|ref|ZP_01999012.1| lipoprotein [Beggiatoa sp. PS]
 gi|152074089|gb|EDN70984.1| lipoprotein [Beggiatoa sp. PS]
          Length = 268

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/218 (38%), Positives = 118/218 (54%), Gaps = 28/218 (12%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM 122
           L++ NL+  P    + ++L  L LS N++T                        +LP ++
Sbjct: 23  LFNQNLTTLPPTLFELSHLEELGLSGNQLT------------------------TLPPEL 58

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
           + L  LKV  LS NQL + P  I  +P LK+LYL +N L  +P +I +L +L  L + GN
Sbjct: 59  AKLSQLKVLYLSHNQLTKLPKVICRLPQLKFLYLSHNQLTTLPSQIARLSELEALYVNGN 118

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            LT +P T   L QL  LILSDNQL+ LP +I  L  L+ + L++N+L TLP  I    C
Sbjct: 119 KLTVLPSTISKLAQLRVLILSDNQLKILPHNIKKLTNLEMIYLNDNRLTTLPPTI----C 174

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
              +LK L L NN+L  LPTE   L  L +L++ +NPL
Sbjct: 175 ELSRLKRLFLSNNQLTRLPTECYKLSRLEKLTIFENPL 212



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/180 (35%), Positives = 88/180 (48%), Gaps = 24/180 (13%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           +++ L L  N L+  P   +K + L+ L LS+N++T LP+ I   P              
Sbjct: 40  HLEELGLSGNQLTTLPPELAKLSQLKVLYLSHNQLTKLPKVICRLP-------------- 85

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
                      LK   LS NQL   P QI  +  L+ LY+  N L  +P  I+KL +L V
Sbjct: 86  ----------QLKFLYLSHNQLTTLPSQIARLSELEALYVNGNKLTVLPSTISKLAQLRV 135

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L  +P     L  LE + L+DN+L +LP +I  L  LK L L NN+L  LPTE
Sbjct: 136 LILSDNQLKILPHNIKKLTNLEMIYLNDNRLTTLPPTICELSRLKRLFLSNNQLTRLPTE 195



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/129 (41%), Positives = 71/129 (55%), Gaps = 4/129 (3%)

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           L+L N +L  +P  + +L  L  L L GN LT +P     L QL+ L LS NQL  LP  
Sbjct: 21  LHLFNQNLTTLPPTLFELSHLEELGLSGNQLTTLPPELAKLSQLKVLYLSHNQLTKLPKV 80

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           I  L  LK L L +N+L TLP++I  L     +L++L ++ NKL  LP+ I  L  L  L
Sbjct: 81  ICRLPQLKFLYLSHNQLTTLPSQIARL----SELEALYVNGNKLTVLPSTISKLAQLRVL 136

Query: 274 SLRDNPLVI 282
            L DN L I
Sbjct: 137 ILSDNQLKI 145



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 55/155 (35%), Positives = 76/155 (49%), Gaps = 3/155 (1%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K   +  L L HN L+  P    +   L+ L LS+N++T LP  I     L  L    N 
Sbjct: 60  KLSQLKVLYLSHNQLTKLPKVICRLPQLKFLYLSHNQLTTLPSQIARLSELEALYVNGNK 119

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT   LP  +S L  L+V  LS NQL+  P  I  +  L+ +YL +N L  +P  I +L 
Sbjct: 120 LTV--LPSTISKLAQLRVLILSDNQLKILPHNIKKLTNLEMIYLNDNRLTTLPPTICELS 177

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQL 207
           +L  L L  N LT +P     L +LE L + +N L
Sbjct: 178 RLKRLFLSNNQLTRLPTECYKLSRLEKLTIFENPL 212



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 76/142 (53%), Gaps = 3/142 (2%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L HN L+  P   ++ + L +L ++ N++T LP  I+    L  LI  +N L  + LP
Sbjct: 90  LYLSHNQLTTLPSQIARLSELEALYVNGNKLTVLPSTISKLAQLRVLILSDNQL--KILP 147

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            ++  L NL++  L+ N+L   P  I ++  LK L+L NN L  +P E  KL +L  L++
Sbjct: 148 HNIKKLTNLEMIYLNDNRLTTLPPTICELSRLKRLFLSNNQLTRLPTECYKLSRLEKLTI 207

Query: 180 GGNSLTDIPDTFGDLYQLEALI 201
             N L+   + F  + Q E +I
Sbjct: 208 FENPLSLEGEWFKLVEQPEKII 229


>gi|418731390|ref|ZP_13289789.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410773922|gb|EKR53943.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 315

 Score =  123 bits (309), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 80/200 (40%), Positives = 115/200 (57%), Gaps = 7/200 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+  L L  N  +  P    +  NL+ LDL++NR+T LP+ I  F  L  L   NN L  
Sbjct: 100 NLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLRLDNNQLA- 158

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LP++++ L+NL++  LSGN+L   P +I  + +L+ LY+  N     P EI +L KL 
Sbjct: 159 -NLPQEITQLQNLELLFLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTFPEEITQLQKLQ 217

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L LGGN LT +P   G L  L+AL L  NQL  LP  I+ L+ L++L+L  N+L TLP 
Sbjct: 218 GLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAILPEEITQLQNLQTLILSGNQLTTLPK 277

Query: 236 EIITLKCLSEKLKSLLLHNN 255
           EI  L    + L++L+L  N
Sbjct: 278 EIGRL----QNLQTLILKGN 293



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 123/229 (53%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N+  L L  N L+  P+  ++  NL+ L LS N+ T LP+ I     L  L   +N 
Sbjct: 74  KLRNLQKLNLGSNRLTTLPEEIAQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNR 133

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP++++  + L+   L  NQL   P +I  +  L+ L+L  N L  +P EI +L 
Sbjct: 134 LT--TLPEEIAQFQKLQWLRLDNNQLANLPQEITQLQNLELLFLSGNRLTTLPEEIAQLR 191

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L + GN  T  P+    L +L+ L L  NQL +LP  I  L+ LK+L L  N+L  
Sbjct: 192 SLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAI 251

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP EI  L    + L++L+L  N+L TLP EI  L+ L  L L+ NP+V
Sbjct: 252 LPEEITQL----QNLQTLILSGNQLTTLPKEIGRLQNLQTLILKGNPIV 296



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 113/230 (49%), Gaps = 28/230 (12%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNL 112
           + P+++  L L    L+       K  NL+ L+L +NR+T                    
Sbjct: 50  QNPKDVRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLT-------------------- 89

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
               +LP++++ L+NL+   LS NQ    P +I  +  L++L L +N L  +P EI +  
Sbjct: 90  ----TLPEEIAQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQ 145

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  L L  N L ++P     L  LE L LS N+L +LP  I+ L+ L+ L ++ N+  T
Sbjct: 146 KLQWLRLDNNQLANLPQEITQLQNLELLFLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTT 205

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            P EI  L    +KL+ L L  N+L TLP EI  L+ L  L L  N L I
Sbjct: 206 FPEEITQL----QKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAI 251



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 88/170 (51%), Gaps = 8/170 (4%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +L + + N K+++  +L+   L     +I  +  L+ L LG+N L  +P EI +L  L  
Sbjct: 44  NLTEALQNPKDVRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTLPEEIAQLRNLQR 103

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N  T +P     L  L+ L L+DN+L +LP  I+  + L+ L L NN+L  LP E
Sbjct: 104 LQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLRLDNNQLANLPQE 163

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVS 286
           I  L    + L+ L L  N+L TLP EI  L+ L  L +  N    RF +
Sbjct: 164 ITQL----QNLELLFLSGNRLTTLPEEIAQLRSLQRLYVYGN----RFTT 205


>gi|418669438|ref|ZP_13230822.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410754822|gb|EKR16467.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 633

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/246 (38%), Positives = 124/246 (50%), Gaps = 22/246 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L  FP    +  NL++L+L +N++  LP  I     L  L  R N LT
Sbjct: 119 QNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLT 178

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+  NL  NQL   P++I  +  L+ L L  N L   P+EI +L  L
Sbjct: 179 V--LPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENL 236

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N LT +P   G L  LE L LS+NQL + P  I  LK L+ L L  N+L T P
Sbjct: 237 QELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFP 296

Query: 235 TEIITLKCLS------EKLKSL-------------LLHNNKLRTLPTEIITLKCLSELSL 275
            EI  LK L        + K++              L  N+L TLP EI  LK L +LSL
Sbjct: 297 KEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSL 356

Query: 276 RDNPLV 281
             N L 
Sbjct: 357 GRNQLT 362



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 97/262 (37%), Positives = 134/262 (51%), Gaps = 20/262 (7%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           ++++ LD S  +    TL  +IE L         +N+  L L  N L+ FP    +   L
Sbjct: 50  LNVRVLDLSGQNFT--TLPKKIEQL---------KNLQELDLRDNQLATFPAVIVELQKL 98

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
            SLDLS NR+  LP  I     L  L + +N L+T    PK++  L+NL+  NL  NQL 
Sbjct: 99  ESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLIT---FPKEIGQLRNLQTLNLQDNQLA 155

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
             P++I  +  L+ L L  N L  +P+EI +L  L  L+L  N L  +P   G L  L+ 
Sbjct: 156 TLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQT 215

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRT 259
           L LS+NQL + P  I  L+ L+ L L  N+L  LP EI  LK     L++L L  N+L T
Sbjct: 216 LGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLK----NLENLELSENQLTT 271

Query: 260 LPTEIITLKCLSELSLRDNPLV 281
            P EI  LK L +L L  N L 
Sbjct: 272 FPKEIGQLKKLQDLGLGRNQLT 293



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 99/275 (36%), Positives = 129/275 (46%), Gaps = 55/275 (20%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI----------------T 99
           +N+ TL L  N L+ FP    +  NL+ L+L  NR+T LP+ I                T
Sbjct: 211 QNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLT 270

Query: 100 NFP-----LSTL----IARNNLLTAESLPKDMSNLKNLKVFNL----------------- 133
            FP     L  L    + RN L T    PK++  LKNL++ +L                 
Sbjct: 271 TFPKEIGQLKKLQDLGLGRNQLTT---FPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKN 327

Query: 134 ------SGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
                 S NQL   P +I  +  L+ L LG N L  +P+EI +L  L+ L LG N LT +
Sbjct: 328 LLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTL 387

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
           P   G L  L  L L  NQL + P  I  L+ L+ L L NN+L  LP EI  LK     L
Sbjct: 388 PKEIGQLKNLYNLGLGRNQLATFPKEIGQLENLQELDLWNNRLTALPKEIGQLK----NL 443

Query: 248 KSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           ++L L  N+L T P EI  LK L +L L  N LVI
Sbjct: 444 ENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVI 478



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/227 (41%), Positives = 120/227 (52%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  P    +  NL++L LS N++T  P+ I     L  L  + N LT
Sbjct: 188 QNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLT 247

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  LPK++  LKNL+   LS NQL  FP +I  +  L+ L LG N L   P+EI +L  L
Sbjct: 248 A--LPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNL 305

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  N    +    G L  L  L LS NQL +LPA I  LK L+ L L  N+L TLP
Sbjct: 306 QMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLP 365

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  LK L     +L L  N+L TLP EI  LK L  L L  N L 
Sbjct: 366 KEIGQLKNLY----NLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLA 408



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 115/228 (50%), Gaps = 7/228 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLL 113
           P N+  L L   N +  P    +  NL+ LDL +N++   P  I     L +L    N L
Sbjct: 49  PLNVRVLDLSGQNFTTLPKKIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRL 108

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L+NL+   L  N+L  FP +I  +  L+ L L +N L  +P EI +L  
Sbjct: 109 VM--LPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQN 166

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N LT +P   G L  L+ L L DNQL +LP  I  L+ L++L L  N+L T 
Sbjct: 167 LEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTF 226

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L    E L+ L L  N+L  LP EI  LK L  L L +N L 
Sbjct: 227 PKEIGQL----ENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLT 270



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/238 (38%), Positives = 111/238 (46%), Gaps = 32/238 (13%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDL-----------------------SNNRITHLPQAIT 99
           L  N L+ FP    +  NL+ LDL                       S N++  LP  I 
Sbjct: 287 LGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIG 346

Query: 100 NFP-LSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
               L  L + RN L T   LPK++  LKNL   +L  NQL   P +I  +  L  L LG
Sbjct: 347 QLKKLQDLSLGRNQLTT---LPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLG 403

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
            N L   P+EI +L  L  L L  N LT +P   G L  LE L LS+NQL + P  I  L
Sbjct: 404 RNQLATFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQL 463

Query: 218 KMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
           K L+ L L  N+L  LP EI  L    EKL+ L L  N+L  LP EI  LK L  L L
Sbjct: 464 KKLQDLGLSYNRLVILPKEIGQL----EKLQDLGLSYNRLVILPKEIGQLKNLQMLDL 517



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/210 (40%), Positives = 110/210 (52%), Gaps = 7/210 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+ FP    +  NL+ LDL NNR+T LP+ I     L  L    N LT
Sbjct: 395 KNLYNLGLGRNQLATFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLT 454

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  LK L+   LS N+L   P +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 455 --TFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNL 512

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  N    +    G L  L  L LS NQL +LPA I  LK L +L L  N+L TLP
Sbjct: 513 QMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLP 572

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
            EI  LK L     +L L  N+L TLP EI
Sbjct: 573 KEIGQLKNLY----NLGLGTNQLTTLPKEI 598



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 90/227 (39%), Positives = 115/227 (50%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +  NL +L L  N++   P+ I     L  L   NN LT
Sbjct: 372 KNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLATFPKEIGQLENLQELDLWNNRLT 431

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  LPK++  LKNL+   LS NQL  FP +I  +  L+ L L  N L  +P+EI +L KL
Sbjct: 432 A--LPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKL 489

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P   G L  L+ L L  NQ +++   I  LK L  L L  N+L TLP
Sbjct: 490 QDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLP 549

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  LK L     +L L  N+L TLP EI  LK L  L L  N L 
Sbjct: 550 AEIGQLKNLY----NLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLT 592



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 89/168 (52%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L + + N  N++V +LSG      P +I  +  L+ L L +N L   P  I +L K
Sbjct: 38  TYRDLTEALQNPLNVRVLDLSGQNFTTLPKKIEQLKNLQELDLRDNQLATFPAVIVELQK 97

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L  +P+  G L  L+ L L  N+L + P  I  L+ L++L L +N+L TL
Sbjct: 98  LESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATL 157

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L+ L EKL    L  N+L  LP EI  L+ L  L+L+DN L 
Sbjct: 158 PVEIGQLQNL-EKLN---LRKNRLTVLPKEIGQLQNLQTLNLQDNQLA 201



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 51/132 (38%), Positives = 75/132 (56%), Gaps = 4/132 (3%)

Query: 151 LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           ++ L L   +   +P++I +L  L  L L  N L   P    +L +LE+L LS+N+L  L
Sbjct: 52  VRVLDLSGQNFTTLPKKIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVML 111

Query: 211 PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
           P  I  L+ L+ L L+ NKL T P EI  L+     L++L L +N+L TLP EI  L+ L
Sbjct: 112 PNEIGRLQNLQELGLYKNKLITFPKEIGQLR----NLQTLNLQDNQLATLPVEIGQLQNL 167

Query: 271 SELSLRDNPLVI 282
            +L+LR N L +
Sbjct: 168 EKLNLRKNRLTV 179


>gi|418753822|ref|ZP_13310061.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
 gi|409965822|gb|EKO33680.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
          Length = 326

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/220 (39%), Positives = 127/220 (57%), Gaps = 7/220 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L HN L+  P        L++LDL+ N++  LP+ I     L  L   NN LT  +LPK+
Sbjct: 3   LSHNRLTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELT--TLPKE 60

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           + NL+NL+  NL+ NQ    P +I ++  L+ L L ++ L  +P+EI  L  L  L+L  
Sbjct: 61  IGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNS 120

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N  T +P+  G+L +L+ L L+ ++L +LP  I  L+ L+ L L+ N+L+TLP EI  L 
Sbjct: 121 NQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEIGKL- 179

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
              + LK+L L+ N+L TLP EI  L+ L ELSL  N L 
Sbjct: 180 ---QNLKNLSLNGNELTTLPKEIGNLQNLQELSLGSNQLT 216



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/242 (37%), Positives = 137/242 (56%), Gaps = 18/242 (7%)

Query: 24  IKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRS 83
           ++TLD + + L  +TL  +IE         K + ++ L L +N L+  P       NL+ 
Sbjct: 21  LQTLDLAQNQL--KTLPKEIE---------KLQKLEALHLGNNELTTLPKEIGNLQNLQE 69

Query: 84  LDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
           L+L++N+ T LP+ I N   L  L   ++ LT  +LPK++ NL+NL+  NL+ NQ    P
Sbjct: 70  LNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLT--TLPKEIGNLQNLQELNLNSNQFTTLP 127

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
            +I ++  L+ L L  + L  +P+EI KL KL  L+L  N L  +P   G L  L+ L L
Sbjct: 128 EEIGNLQKLQTLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSL 187

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
           + N+L +LP  I NL+ L+ L L +N+L TLP +I  L    +KL+ L L  N+L+TLP 
Sbjct: 188 NGNELTTLPKEIGNLQNLQELSLGSNQLTTLPEKIGNL----QKLQELSLAGNRLKTLPK 243

Query: 263 EI 264
           EI
Sbjct: 244 EI 245



 Score =  114 bits (286), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 83/200 (41%), Positives = 120/200 (60%), Gaps = 9/200 (4%)

Query: 84  LDLSNNRITHLPQAITNF-PLSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           LDLS+NR+T LP+ I N   L TL +A+N L   ++LPK++  L+ L+  +L  N+L   
Sbjct: 1   LDLSHNRLTTLPKEIGNLQKLQTLDLAQNQL---KTLPKEIEKLQKLEALHLGNNELTTL 57

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P +I ++  L+ L L +N    +P EI  L KL  LSL  + LT +P   G+L  L+ L 
Sbjct: 58  PKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELN 117

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           L+ NQ  +LP  I NL+ L++L L+ ++L TLP EI  L    +KL+ L L+ N+L+TLP
Sbjct: 118 LNSNQFTTLPEEIGNLQKLQTLDLNYSRLTTLPKEIGKL----QKLQKLNLYKNQLKTLP 173

Query: 262 TEIITLKCLSELSLRDNPLV 281
            EI  L+ L  LSL  N L 
Sbjct: 174 KEIGKLQNLKNLSLNGNELT 193



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 94/240 (39%), Positives = 132/240 (55%), Gaps = 13/240 (5%)

Query: 49  NDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF- 101
           N +   PE I  L       L H+ L+  P       NL+ L+L++N+ T LP+ I N  
Sbjct: 75  NQFTTLPEEIGNLQKLQKLSLAHSRLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQ 134

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L TL    + LT  +LPK++  L+ L+  NL  NQL+  P +I  +  LK L L  N L
Sbjct: 135 KLQTLDLNYSRLT--TLPKEIGKLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNEL 192

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +P+EI  L  L  LSLG N LT +P+  G+L +L+ L L+ N+L++LP  I NL+ L+
Sbjct: 193 TTLPKEIGNLQNLQELSLGSNQLTTLPEKIGNLQKLQELSLAGNRLKTLPKEIGNLQNLQ 252

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L L+NN+L TLP EI  L+     L+SL L  N L + P EI  L+ L  L L  NP +
Sbjct: 253 ELNLNNNQLTTLPKEIENLQS----LESLNLSGNSLISFPEEIGKLQKLKWLYLGGNPFL 308


>gi|255084227|ref|XP_002508688.1| predicted protein [Micromonas sp. RCC299]
 gi|226523965|gb|ACO69946.1| predicted protein [Micromonas sp. RCC299]
          Length = 518

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/220 (40%), Positives = 116/220 (52%), Gaps = 7/220 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L+ N L+  P    + T+L+ L L  N++T LP  I     L  L    N LT  SLP +
Sbjct: 255 LHRNQLTSVPAEIGQLTSLKRLFLHRNQLTSLPAEIGQLTSLVKLDLTTNKLT--SLPAE 312

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L++L+   LSGNQL   P +I  + +L  L LGNN L  +P EI +L  L  L+LGG
Sbjct: 313 IGQLESLRELRLSGNQLRSVPAEIGQLTSLTLLDLGNNQLTSMPAEIGQLTSLVELNLGG 372

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N LT +P   G L  L+ L L  NQL S+PA I  L  L+ L L  N+L ++P E   L 
Sbjct: 373 NHLTSMPAEIGQLASLKRLFLHRNQLTSMPAEIGQLTSLEMLHLGGNQLMSVPAEAGQLT 432

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                LK LLL  N+L ++P EI  L  L  L L  N L 
Sbjct: 433 S----LKRLLLDRNQLTSVPAEIGQLTSLEMLHLGGNQLT 468



 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 94/245 (38%), Positives = 123/245 (50%), Gaps = 16/245 (6%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN     P  I  L       L HN L+  P    +  +L  L+L NNR+T LP  I 
Sbjct: 116 LGNNRLTSLPAEIGQLTSLVELNLEHNKLTELPAEIGQLASLVELNLGNNRLTSLPAEIG 175

Query: 100 NFPLSTLIARN---NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL 156
              L++L+  N   N    E LP ++  L +L+  NL  N+L   P +I  + +LK L+L
Sbjct: 176 Q--LTSLVELNLDDNTPLTE-LPAEIGQLTSLRELNLCNNRLTSLPAEIGQLTSLKRLFL 232

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
             N L  +P EI +L  L  L+L  N LT +P   G L  L+ L L  NQL SLPA I  
Sbjct: 233 HRNQLTSLPAEIGQLASLVELNLHRNQLTSVPAEIGQLTSLKRLFLHRNQLTSLPAEIGQ 292

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           L  L  L L  NKL +LP EI  L    E L+ L L  N+LR++P EI  L  L+ L L 
Sbjct: 293 LTSLVKLDLTTNKLTSLPAEIGQL----ESLRELRLSGNQLRSVPAEIGQLTSLTLLDLG 348

Query: 277 DNPLV 281
           +N L 
Sbjct: 349 NNQLT 353



 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 101/271 (37%), Positives = 127/271 (46%), Gaps = 30/271 (11%)

Query: 39  LATQIEL-LPNNDYNKKPENIDTL-------LLYHNNLSFFPDNASKFTNLRSLDLSNNR 90
           LA+ +EL L NN     P  I  L       L  +  L+  P    + T+LR L+L NNR
Sbjct: 154 LASLVELNLGNNRLTSLPAEIGQLTSLVELNLDDNTPLTELPAEIGQLTSLRELNLCNNR 213

Query: 91  ITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIP 149
           +T LP  I     L  L    N LT  SLP ++  L +L   NL  NQL   P +I  + 
Sbjct: 214 LTSLPAEIGQLTSLKRLFLHRNQLT--SLPAEIGQLASLVELNLHRNQLTSVPAEIGQLT 271

Query: 150 TLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
           +LK L+L  N L  +P EI +L  L  L L  N LT +P   G L  L  L LS NQL S
Sbjct: 272 SLKRLFLHRNQLTSLPAEIGQLTSLVKLDLTTNKLTSLPAEIGQLESLRELRLSGNQLRS 331

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE-------------------KLKSL 250
           +PA I  L  L  L L NN+L ++P EI  L  L E                    LK L
Sbjct: 332 VPAEIGQLTSLTLLDLGNNQLTSMPAEIGQLTSLVELNLGGNHLTSMPAEIGQLASLKRL 391

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            LH N+L ++P EI  L  L  L L  N L+
Sbjct: 392 FLHRNQLTSMPAEIGQLTSLEMLHLGGNQLM 422



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/203 (37%), Positives = 106/203 (52%), Gaps = 7/203 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI-ARNNLLTAESLPKD 121
           L  N L+  P    +  +LR L LS N++  +P  I      TL+   NN LT  S+P +
Sbjct: 301 LTTNKLTSLPAEIGQLESLRELRLSGNQLRSVPAEIGQLTSLTLLDLGNNQLT--SMPAE 358

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L +L   NL GN L   P +I  + +LK L+L  N L  +P EI +L  L +L LGG
Sbjct: 359 IGQLTSLVELNLGGNHLTSMPAEIGQLASLKRLFLHRNQLTSMPAEIGQLTSLEMLHLGG 418

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P   G L  L+ L+L  NQL S+PA I  L  L+ L L  N+L ++P EI  L 
Sbjct: 419 NQLMSVPAEAGQLTSLKRLLLDRNQLTSVPAEIGQLTSLEMLHLGGNQLTSVPAEIGQLT 478

Query: 242 CLSEKLKSLLLHNNKLRTLPTEI 264
                L +L L  N+L +LP  I
Sbjct: 479 S----LWTLHLGGNQLTSLPAAI 497



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/179 (37%), Positives = 90/179 (50%), Gaps = 9/179 (5%)

Query: 46  LPNNDYNKKPENID-----TLL-LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L  N     P  I      TLL L +N L+  P    + T+L  L+L  N +T +P  I 
Sbjct: 324 LSGNQLRSVPAEIGQLTSLTLLDLGNNQLTSMPAEIGQLTSLVELNLGGNHLTSMPAEIG 383

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L  L    N LT  S+P ++  L +L++ +L GNQL   P +   + +LK L L  
Sbjct: 384 QLASLKRLFLHRNQLT--SMPAEIGQLTSLEMLHLGGNQLMSVPAEAGQLTSLKRLLLDR 441

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           N L  VP EI +L  L +L LGGN LT +P   G L  L  L L  NQL SLPA+I +L
Sbjct: 442 NQLTSVPAEIGQLTSLEMLHLGGNQLTSVPAEIGQLTSLWTLHLGGNQLTSLPAAIRDL 500



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 86/183 (46%), Gaps = 25/183 (13%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           SLP ++  L +LK   L GN L   P +I  + +L  L L ++ L  +P EI +L  L  
Sbjct: 10  SLPAEIGQLTSLKELRLHGNGLTSLPAEIGQLTSLTLLILDHDELTSLPAEIGQLASLVE 69

Query: 177 LSLGGNSLTDIPDTFGDLYQL---------------------EALILSDNQLESLPASIS 215
           L L  N LT +P   G L  L                       L L +N+L SLPA I 
Sbjct: 70  LDLSYNQLTSLPAEIGQLTSLVKLDLTTWLEEPPSLLEELDSWELNLGNNRLTSLPAEIG 129

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            L  L  L L +NKL  LP EI  L  L E    L L NN+L +LP EI  L  L EL+L
Sbjct: 130 QLTSLVELNLEHNKLTELPAEIGQLASLVE----LNLGNNRLTSLPAEIGQLTSLVELNL 185

Query: 276 RDN 278
            DN
Sbjct: 186 DDN 188



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 69/172 (40%), Positives = 82/172 (47%), Gaps = 25/172 (14%)

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NL  NQL   P +I  + +LK L L  N L  +P EI +L  L +L L  + LT +P  
Sbjct: 1   MNLICNQLTSLPAEIGQLTSLKELRLHGNGLTSLPAEIGQLTSLTLLILDHDELTSLPAE 60

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKML------------KSLL---------LHNNK 229
            G L  L  L LS NQL SLPA I  L  L             SLL         L NN+
Sbjct: 61  IGQLASLVELDLSYNQLTSLPAEIGQLTSLVKLDLTTWLEEPPSLLEELDSWELNLGNNR 120

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L +LP EI  L  L E    L L +NKL  LP EI  L  L EL+L +N L 
Sbjct: 121 LTSLPAEIGQLTSLVE----LNLEHNKLTELPAEIGQLASLVELNLGNNRLT 168


>gi|418730499|ref|ZP_13288993.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774708|gb|EKR54712.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 631

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/246 (38%), Positives = 124/246 (50%), Gaps = 22/246 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L  FP    +  NL++L+L +N++  LP  I     L  L  R N LT
Sbjct: 117 QNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLT 176

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+  NL  NQL   P++I  +  L+ L L  N L   P+EI +L  L
Sbjct: 177 V--LPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENL 234

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N LT +P   G L  LE L LS+NQL + P  I  LK L+ L L  N+L T P
Sbjct: 235 QELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFP 294

Query: 235 TEIITLKCLS------EKLKSL-------------LLHNNKLRTLPTEIITLKCLSELSL 275
            EI  LK L        + K++              L  N+L TLP EI  LK L +LSL
Sbjct: 295 KEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSL 354

Query: 276 RDNPLV 281
             N L 
Sbjct: 355 GRNQLT 360



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 120/228 (52%), Gaps = 9/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLL 113
           +N+  L L  N L+ FP    +   L SLDLS NR+  LP  I     L  L + +N L+
Sbjct: 71  KNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLI 130

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T    PK++  L+NL+  NL  NQL   P++I  +  L+ L L  N L  +P+EI +L  
Sbjct: 131 T---FPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRLTVLPKEIGQLQN 187

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N L  +P   G L  L+ L LS+NQL + P  I  L+ L+ L L  N+L  L
Sbjct: 188 LQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTAL 247

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  LK     L++L L  N+L T P EI  LK L +L L  N L 
Sbjct: 248 PKEIGQLK----NLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLT 291



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/275 (36%), Positives = 129/275 (46%), Gaps = 55/275 (20%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI----------------T 99
           +N+ TL L  N L+ FP    +  NL+ L+L  NR+T LP+ I                T
Sbjct: 209 QNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLT 268

Query: 100 NFP-----LSTL----IARNNLLTAESLPKDMSNLKNLKVFNL----------------- 133
            FP     L  L    + RN L T    PK++  LKNL++ +L                 
Sbjct: 269 TFPKEIGQLKKLQDLGLGRNQLTT---FPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKN 325

Query: 134 ------SGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
                 S NQL   P +I  +  L+ L LG N L  +P+EI +L  L+ L LG N LT +
Sbjct: 326 LLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTL 385

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
           P   G L  L  L L  NQL + P  I  L+ L+ L L NN+L  LP EI  LK     L
Sbjct: 386 PKEIGQLKNLYNLGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLK----NL 441

Query: 248 KSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           ++L L  N+L T P EI  LK L +L L  N LVI
Sbjct: 442 ENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVI 476



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 95/227 (41%), Positives = 120/227 (52%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  P    +  NL++L LS N++T  P+ I     L  L  + N LT
Sbjct: 186 QNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLT 245

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  LPK++  LKNL+   LS NQL  FP +I  +  L+ L LG N L   P+EI +L  L
Sbjct: 246 A--LPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNL 303

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  N    +    G L  L  L LS NQL +LPA I  LK L+ L L  N+L TLP
Sbjct: 304 QMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLP 363

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  LK L     +L L  N+L TLP EI  LK L  L L  N L 
Sbjct: 364 KEIGQLKNLY----NLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLT 406



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 115/228 (50%), Gaps = 7/228 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLL 113
           P N+  L L   N +  P    +  NL+ LDL +N++   P  I     L +L    N L
Sbjct: 47  PLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRL 106

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L+NL+   L  N+L  FP +I  +  L+ L L +N L  +P EI +L  
Sbjct: 107 VM--LPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATLPVEIGQLQN 164

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N LT +P   G L  L+ L L DNQL +LP  I  L+ L++L L  N+L T 
Sbjct: 165 LEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTF 224

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L    E L+ L L  N+L  LP EI  LK L  L L +N L 
Sbjct: 225 PKEIGQL----ENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLT 268



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 91/238 (38%), Positives = 111/238 (46%), Gaps = 32/238 (13%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDL-----------------------SNNRITHLPQAIT 99
           L  N L+ FP    +  NL+ LDL                       S N++  LP  I 
Sbjct: 285 LGRNQLTTFPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIG 344

Query: 100 NFP-LSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
               L  L + RN L T   LPK++  LKNL   +L  NQL   P +I  +  L  L LG
Sbjct: 345 QLKKLQDLSLGRNQLTT---LPKEIGQLKNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLG 401

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
            N L   P+EI +L  L  L L  N LT +P   G L  LE L LS+NQL + P  I  L
Sbjct: 402 RNQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQL 461

Query: 218 KMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
           K L+ L L  N+L  LP EI  L    EKL+ L L  N+L  LP EI  LK L  L L
Sbjct: 462 KKLQDLGLSYNRLVILPKEIGQL----EKLQDLGLSYNRLVILPKEIGQLKNLQMLDL 515



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 91/227 (40%), Positives = 116/227 (51%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +  NL +L L  N++T  P+ I     L  L   NN LT
Sbjct: 370 KNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLTTFPKEIGQLENLQELDLWNNRLT 429

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  LPK++  LKNL+   LS NQL  FP +I  +  L+ L L  N L  +P+EI +L KL
Sbjct: 430 A--LPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKL 487

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P   G L  L+ L L  NQ +++   I  LK L  L L  N+L TLP
Sbjct: 488 QDLGLSYNRLVILPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLP 547

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  LK L     +L L  N+L TLP EI  LK L  L L  N L 
Sbjct: 548 AEIGQLKNLY----NLDLGTNQLTTLPKEIGQLKNLYNLGLGTNQLT 590



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 73/206 (35%), Positives = 96/206 (46%), Gaps = 26/206 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+ FP    +  NL+ LDL NNR+T LP+ I     L  L    N LT
Sbjct: 393 KNLYNLGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLT 452

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  LK L+   LS N+L   P +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 453 --TFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLEKLQDLGLSYNRLVILPKEIGQLKNL 510

Query: 175 HVLSL-----------------------GGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
            +L L                         N L  +P   G L  L  L L  NQL +LP
Sbjct: 511 QMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKNLYNLDLGTNQLTTLP 570

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEI 237
             I  LK L +L L  N+L TLP EI
Sbjct: 571 KEIGQLKNLYNLGLGTNQLTTLPKEI 596



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 89/168 (52%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  N++V NLSG      P +I  +  L+ L L +N L   P  I +L K
Sbjct: 36  TYMDLTKALQNPLNVRVLNLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQK 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L  +P+  G L  L+ L L  N+L + P  I  L+ L++L L +N+L TL
Sbjct: 96  LESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLITFPKEIGQLRNLQTLNLQDNQLATL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L+ L EKL    L  N+L  LP EI  L+ L  L+L+DN L 
Sbjct: 156 PVEIGQLQNL-EKLN---LRKNRLTVLPKEIGQLQNLQTLNLQDNQLA 199



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/132 (39%), Positives = 75/132 (56%), Gaps = 4/132 (3%)

Query: 151 LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           ++ L L   +   +P+EI +L  L  L L  N L   P    +L +LE+L LS+N+L  L
Sbjct: 50  VRVLNLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRLVML 109

Query: 211 PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
           P  I  L+ L+ L L+ NKL T P EI  L+     L++L L +N+L TLP EI  L+ L
Sbjct: 110 PNEIGRLQNLQELGLYKNKLITFPKEIGQLR----NLQTLNLQDNQLATLPVEIGQLQNL 165

Query: 271 SELSLRDNPLVI 282
            +L+LR N L +
Sbjct: 166 EKLNLRKNRLTV 177


>gi|418704583|ref|ZP_13265455.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410765799|gb|EKR36494.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 267

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/250 (36%), Positives = 127/250 (50%), Gaps = 7/250 (2%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLK 126
           L   P     F NL  L+L  N++T LP+ I     L  L    N  T  SLPK++  L+
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFT--SLPKEIGQLQ 63

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL+  +L+GNQ    P +I  +  L+ L L  N L  +P+EI +L  L  L L GN  T 
Sbjct: 64  NLERLDLAGNQFTTLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTS 123

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P   G L +LEAL L  N+    P  I   + LK L L  ++L+TLP EI+ L    + 
Sbjct: 124 LPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLL----QN 179

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVH 306
           L+SL L  N+L +LP EI  L+ L EL+L+DN L          +   +L L S +  + 
Sbjct: 180 LQSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQNLQVLRLYSNSFSLK 239

Query: 307 EIDYSQEHLP 316
           E    QE LP
Sbjct: 240 EKQKIQELLP 249



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 109/221 (49%), Gaps = 28/221 (12%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM 122
           L  N  +  P    +  NL  LDL+ N+ T                        +LPK++
Sbjct: 47  LAGNQFTSLPKEIGQLQNLERLDLAGNQFT------------------------TLPKEI 82

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             L+NL+V NL+GNQL   P +I  +  L+ L L  N    +P+EI +L KL  L+L  N
Sbjct: 83  GQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHN 142

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
             T  P        L+ L LS +QL++LP  I  L+ L+SL L  N+L +LP EI  L+ 
Sbjct: 143 RFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSLPKEIGQLQN 202

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
           L E    L L +NKL+TLP EI  L+ L  L L  N   ++
Sbjct: 203 LFE----LNLQDNKLKTLPKEIGQLQNLQVLRLYSNSFSLK 239



 Score = 95.1 bits (235), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 64/174 (36%), Positives = 93/174 (53%), Gaps = 3/174 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N  +  P    +  NLR L+L+ N++T LP+ I     L  L    N  T
Sbjct: 63  QNLERLDLAGNQFTTLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFT 122

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLPK++  L+ L+  NL  N+   FP +I    +LK+L L  + L  +P+EI  L  L
Sbjct: 123 --SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNL 180

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
             L L GN LT +P   G L  L  L L DN+L++LP  I  L+ L+ L L++N
Sbjct: 181 QSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQNLQVLRLYSN 234



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 64/123 (52%), Gaps = 4/123 (3%)

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           +G + L  +PR I     L  L+L GN LT +P   G L +L  L L+ NQ  SLP  I 
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIG 60

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            L+ L+ L L  N+  TLP EI  L    + L+ L L  N+L +LP EI  L+ L  L L
Sbjct: 61  QLQNLERLDLAGNQFTTLPKEIGQL----QNLRVLNLAGNQLTSLPKEIGQLQNLERLDL 116

Query: 276 RDN 278
             N
Sbjct: 117 AGN 119


>gi|418702265|ref|ZP_13263176.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|418717513|ref|ZP_13277175.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421116459|ref|ZP_15576844.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|421125803|ref|ZP_15586047.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136751|ref|ZP_15596848.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410011919|gb|EKO70025.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410018933|gb|EKO85761.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410436455|gb|EKP85567.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410758784|gb|EKR25010.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410787110|gb|EKR80845.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|455790756|gb|EMF42603.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 315

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/200 (40%), Positives = 115/200 (57%), Gaps = 7/200 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+  L L  N  +  P    +  NL+ LDL++NR+T LP+ I  F  L  L   NN L  
Sbjct: 100 NLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLRLDNNQLA- 158

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LP++++ L+NL++  LSGN+L   P +I  + +L+ LY+  N     P EI +L KL 
Sbjct: 159 -NLPQEITQLQNLELLFLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTFPEEITQLQKLQ 217

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L LGGN LT +P   G L  L+AL L  NQL  LP  I+ L+ L++L+L  N+L TLP 
Sbjct: 218 GLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAILPEEITQLQNLQTLILSGNQLTTLPK 277

Query: 236 EIITLKCLSEKLKSLLLHNN 255
           EI  L    + L++L+L  N
Sbjct: 278 EIGRL----QNLQTLILKGN 293



 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 123/229 (53%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N+  L L  N L+  P+  ++  NL+ L LS N+ T LP+ I     L  L   +N 
Sbjct: 74  KLRNLQKLNLGSNRLTTLPEEIAQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNR 133

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP++++  + L+   L  NQL   P +I  +  L+ L+L  N L  +P EI +L 
Sbjct: 134 LT--TLPEEIAQFQKLQWLRLDNNQLANLPQEITQLQNLELLFLSGNRLTTLPEEIAQLR 191

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L + GN  T  P+    L +L+ L L  NQL +LP  I  L+ LK+L L  N+L  
Sbjct: 192 SLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAI 251

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP EI  L    + L++L+L  N+L TLP EI  L+ L  L L+ NP+V
Sbjct: 252 LPEEITQL----QNLQTLILSGNQLTTLPKEIGRLQNLQTLILKGNPIV 296



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 113/230 (49%), Gaps = 28/230 (12%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNL 112
           + P+++  L L    L+       K  NL+ L+L +NR+T                    
Sbjct: 50  QNPKDVRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLT-------------------- 89

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
               +LP++++ L+NL+   LS NQ    P +I  +  L++L L +N L  +P EI +  
Sbjct: 90  ----TLPEEIAQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQ 145

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  L L  N L ++P     L  LE L LS N+L +LP  I+ L+ L+ L ++ N+  T
Sbjct: 146 KLQWLRLDNNQLANLPQEITQLQNLELLFLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTT 205

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            P EI  L    +KL+ L L  N+L TLP EI  L+ L  L L  N L I
Sbjct: 206 FPEEITQL----QKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAI 251



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 88/170 (51%), Gaps = 8/170 (4%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +L + + N K+++  +L+   L     +I  +  L+ L LG+N L  +P EI +L  L  
Sbjct: 44  NLTEALQNPKDVRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTLPEEIAQLRNLQR 103

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N  T +P     L  L+ L L+DN+L +LP  I+  + L+ L L NN+L  LP E
Sbjct: 104 LQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLRLDNNQLANLPQE 163

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVS 286
           I  L    + L+ L L  N+L TLP EI  L+ L  L +  N    RF +
Sbjct: 164 ITQL----QNLELLFLSGNRLTTLPEEIAQLRSLQRLYVYGN----RFTT 205


>gi|418693182|ref|ZP_13254245.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|418723760|ref|ZP_13282594.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|400356840|gb|EJP12998.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|409962558|gb|EKO26292.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 315

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/200 (40%), Positives = 115/200 (57%), Gaps = 7/200 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L  N  +  P    +  NL+ LDL++NR+T LP+ I  F  L  L   NN L  
Sbjct: 100 NLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLSLDNNQLA- 158

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LP++++ L+NL++  LSGN+L   P +I  + +L+ LY+  N     P EI +L KL 
Sbjct: 159 -NLPQEITQLQNLELLFLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTTFPEEITQLQKLQ 217

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L LGGN LT +P   G L  L+AL L  NQL  LP  I+ L+ L++L+L  N+L TLP 
Sbjct: 218 GLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAILPEEITQLQNLQTLILSGNQLTTLPK 277

Query: 236 EIITLKCLSEKLKSLLLHNN 255
           EI  L    + L++L+L  N
Sbjct: 278 EIGRL----QNLQTLILKGN 293



 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 124/229 (54%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N+  L L  N L+  P+  ++  NL+ L LS N+ T LP+ I     L  L   +N 
Sbjct: 74  KLRNLQKLNLGSNRLTTLPEEIAQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNR 133

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP++++  + L+  +L  NQL   P +I  +  L+ L+L  N L  +P EI +L 
Sbjct: 134 LT--TLPEEIAQFQKLQWLSLDNNQLANLPQEITQLQNLELLFLSGNRLTTLPEEIAQLR 191

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L + GN  T  P+    L +L+ L L  NQL +LP  I  L+ LK+L L  N+L  
Sbjct: 192 SLQRLYVYGNRFTTFPEEITQLQKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAI 251

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP EI  L    + L++L+L  N+L TLP EI  L+ L  L L+ NP+V
Sbjct: 252 LPEEITQL----QNLQTLILSGNQLTTLPKEIGRLQNLQTLILKGNPIV 296



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 77/230 (33%), Positives = 114/230 (49%), Gaps = 28/230 (12%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNL 112
           + P+++  L L    L+       K  NL+ L+L +NR+T                    
Sbjct: 50  QNPKDVRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLT-------------------- 89

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
               +LP++++ L+NL+   LS NQ    P +I  +  L++L L +N L  +P EI +  
Sbjct: 90  ----TLPEEIAQLRNLQRLQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQ 145

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  LSL  N L ++P     L  LE L LS N+L +LP  I+ L+ L+ L ++ N+  T
Sbjct: 146 KLQWLSLDNNQLANLPQEITQLQNLELLFLSGNRLTTLPEEIAQLRSLQRLYVYGNRFTT 205

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            P EI  L    +KL+ L L  N+L TLP EI  L+ L  L L  N L I
Sbjct: 206 FPEEITQL----QKLQGLDLGGNQLTTLPKEIGRLQNLKALHLGGNQLAI 251



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 59/170 (34%), Positives = 88/170 (51%), Gaps = 8/170 (4%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +L + + N K+++  +L+   L     +I  +  L+ L LG+N L  +P EI +L  L  
Sbjct: 44  NLTEALQNPKDVRQLDLAAKGLTTLLKEIGKLRNLQKLNLGSNRLTTLPEEIAQLRNLQR 103

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N  T +P     L  L+ L L+DN+L +LP  I+  + L+ L L NN+L  LP E
Sbjct: 104 LQLSFNQFTTLPKEIWQLQNLQHLDLNDNRLTTLPEEIAQFQKLQWLSLDNNQLANLPQE 163

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVS 286
           I  L    + L+ L L  N+L TLP EI  L+ L  L +  N    RF +
Sbjct: 164 ITQL----QNLELLFLSGNRLTTLPEEIAQLRSLQRLYVYGN----RFTT 205


>gi|418702929|ref|ZP_13263821.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410767473|gb|EKR38148.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 328

 Score =  123 bits (308), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 103/261 (39%), Positives = 135/261 (51%), Gaps = 18/261 (6%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           + ++TLD S +    +TL  +I  L         +N+  L L  N +   P    K   L
Sbjct: 20  LKVRTLDLSANRF--KTLPKEIGQL---------KNLRKLNLSANQIKTIPKEIEKLQKL 68

Query: 82  RSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           +SL L NN++T LPQ I     L  L    N LT  +LP+++  LKNLK  NLS NQ++ 
Sbjct: 69  QSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLT--TLPQEIGQLKNLKSLNLSYNQIKT 126

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +I  +  L+ L L NN L  +P+EI +L  L  L L  N LT +P   G L  L+ L
Sbjct: 127 IPKKIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDL 186

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L  NQL  LP  I  LK L++L L NN+L TL  EI  L    + LKSL L +N+L T 
Sbjct: 187 YLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQL----QNLKSLDLRSNQLTTF 242

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P EI  LK L  L L  N L 
Sbjct: 243 PKEIGQLKNLQVLDLGSNQLT 263



 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 122/228 (53%), Gaps = 7/228 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLL 113
           P  + TL L  N     P    +  NLR L+LS N+I  +P+ I     L +L   NN L
Sbjct: 19  PLKVRTLDLSANRFKTLPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQKLQSLYLPNNQL 78

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +LP+++  L+ L+   L  NQL   P +I  +  LK L L  N +  +P++I KL K
Sbjct: 79  T--TLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIEKLQK 136

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P   G L  L++L LS N+L +LP  I +L+ L+ L L +N+L  L
Sbjct: 137 LQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTIL 196

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  LK     L++L L NN+L TL  EI  L+ L  L LR N L 
Sbjct: 197 PNEIGQLK----NLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLT 240



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/202 (40%), Positives = 112/202 (55%), Gaps = 28/202 (13%)

Query: 81  LRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           +R+LDLS NR                         ++LPK++  LKNL+  NLS NQ++ 
Sbjct: 22  VRTLDLSANRF------------------------KTLPKEIGQLKNLRKLNLSANQIKT 57

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +I  +  L+ LYL NN L  +P+EI +L KL  L L  N LT +P   G L  L++L
Sbjct: 58  IPKEIEKLQKLQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSL 117

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            LS NQ++++P  I  L+ L+SL L NN+L TLP EI  L    + L+SL L  N+L TL
Sbjct: 118 NLSYNQIKTIPKKIEKLQKLQSLGLDNNQLTTLPQEIGQL----QNLQSLDLSTNRLTTL 173

Query: 261 PTEIITLKCLSELSLRDNPLVI 282
           P EI  L+ L +L L  N L I
Sbjct: 174 PQEIGHLQNLQDLYLVSNQLTI 195



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 94/242 (38%), Positives = 131/242 (54%), Gaps = 13/242 (5%)

Query: 46  LPNNDYNKKPENIDTL----LLY--HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           LPNN     P+ I  L     LY   N L+  P    +  NL+SL+LS N+I  +P+ I 
Sbjct: 73  LPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTIPKKIE 132

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L +L   NN LT  +LP+++  L+NL+  +LS N+L   P +I  +  L+ LYL +
Sbjct: 133 KLQKLQSLGLDNNQLT--TLPQEIGQLQNLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVS 190

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P EI +L  L  L+L  N LT +      L  L++L L  NQL + P  I  LK
Sbjct: 191 NQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSLDLRSNQLTTFPKEIGQLK 250

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+ L L +N+L TLP  I  LK     L++L L +N+L TLP EI  L+ L EL L +N
Sbjct: 251 NLQVLDLGSNQLTTLPEGIGQLK----NLQTLDLDSNQLTTLPQEIGQLQNLQELFLNNN 306

Query: 279 PL 280
            L
Sbjct: 307 QL 308



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 80/209 (38%), Positives = 116/209 (55%), Gaps = 14/209 (6%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           ++K+L+ SY+ +  +T+  +IE         K + + +L L +N L+  P    +  NL+
Sbjct: 113 NLKSLNLSYNQI--KTIPKKIE---------KLQKLQSLGLDNNQLTTLPQEIGQLQNLQ 161

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           SLDLS NR+T LPQ I +   L  L   +N LT   LP ++  LKNL+  NL  N+L   
Sbjct: 162 SLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTI--LPNEIGQLKNLQTLNLRNNRLTTL 219

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
             +I  +  LK L L +N L   P+EI +L  L VL LG N LT +P+  G L  L+ L 
Sbjct: 220 SKEIEQLQNLKSLDLRSNQLTTFPKEIGQLKNLQVLDLGSNQLTTLPEGIGQLKNLQTLD 279

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  NQL +LP  I  L+ L+ L L+NN+L
Sbjct: 280 LDSNQLTTLPQEIGQLQNLQELFLNNNQL 308



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 68/168 (40%), Positives = 94/168 (55%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T + L K + N   ++  +LS N+ +  P +I  +  L+ L L  N +  +P+EI KL K
Sbjct: 8   TYQDLTKALQNPLKVRTLDLSANRFKTLPKEIGQLKNLRKLNLSANQIKTIPKEIEKLQK 67

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P   G L +L+ L L  NQL +LP  I  LK LKSL L  N+++T+
Sbjct: 68  LQSLYLPNNQLTTLPQEIGQLQKLQWLYLPKNQLTTLPQEIGQLKNLKSLNLSYNQIKTI 127

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P +I  L    +KL+SL L NN+L TLP EI  L+ L  L L  N L 
Sbjct: 128 PKKIEKL----QKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLT 171


>gi|418701961|ref|ZP_13262879.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759093|gb|EKR25312.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 267

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/250 (36%), Positives = 127/250 (50%), Gaps = 7/250 (2%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           L   P     F NL  L+L  N++T LP+ I     L  L    N  T  SLPK++  L+
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFT--SLPKEIGQLQ 63

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL+  +L+GNQL   P +I  +  L+ L L  N    +P+EI +L  L  L L GN  T 
Sbjct: 64  NLERLDLNGNQLASLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTS 123

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P   G L +LEAL L  N+    P  I   + LK L L  ++L+TLP EI+ L    + 
Sbjct: 124 LPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLL----QN 179

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVH 306
           L+SL L  N+L +LP EI  L+ L EL+L+DN L          +   +L L S +  + 
Sbjct: 180 LQSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLK 239

Query: 307 EIDYSQEHLP 316
           E    QE LP
Sbjct: 240 EKQKIQELLP 249



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 65/123 (52%), Gaps = 4/123 (3%)

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           +G + L  +PR I     L  L+L GN LT +P   G L  L  L L+ NQ  SLP  I 
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            L+ L+ L L+ N+L +LP EI  L    +KL+ L L  N+  +LP EI  L+ L  L L
Sbjct: 61  QLQNLERLDLNGNQLASLPKEIGQL----QKLRVLNLAGNQFTSLPKEIGQLQNLERLDL 116

Query: 276 RDN 278
             N
Sbjct: 117 AGN 119


>gi|421126392|ref|ZP_15586625.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410436101|gb|EKP85224.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 267

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 92/250 (36%), Positives = 127/250 (50%), Gaps = 7/250 (2%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           L   P     F NL  L+L  N++T LP+ I     L  L    N  T  SLPK++  L+
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFT--SLPKEIGQLQ 63

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL+  +L GNQ    P +I  +  L+ L L  N L  +P+EI +L  L  L L GN  T 
Sbjct: 64  NLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTS 123

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P   G L +LEAL L  N+    P  I   + LK L L  ++L+TLP EI+ L    + 
Sbjct: 124 LPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLL----QN 179

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVH 306
           L+SL L +N+L +LP EI  L+ L EL+L+DN L          +   +L L S +  + 
Sbjct: 180 LQSLHLDSNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQKLEVLRLYSNSFSLK 239

Query: 307 EIDYSQEHLP 316
           E    QE LP
Sbjct: 240 EKQKIQELLP 249



 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 89/229 (38%), Positives = 125/229 (54%), Gaps = 7/229 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N L+  P    +  NLR L+L+ N+ T LP+ I     L  L    N  T
Sbjct: 17  QNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFT 76

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLPK++  L+NL+V NL+GNQL   P +I  +  L+ L L  N    +P+EI +L KL
Sbjct: 77  --SLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKL 134

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N  T  P        L+ L LS +QL++LP  I  L+ L+SL L +N+L +LP
Sbjct: 135 EALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLP 194

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
            EI  L+ L E    L L +NKL+TLP EI  L+ L  L L  N   ++
Sbjct: 195 KEIGQLQNLFE----LNLQDNKLKTLPKEIGQLQKLEVLRLYSNSFSLK 239



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 63/123 (51%), Gaps = 4/123 (3%)

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           +G + L  +PR I     L  L+L GN LT +P   G L  L  L L+ NQ  SLP  I 
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            L+ L+ L L  N+  +LP EI  L    + L+ L L  N+L +LP EI  L+ L  L L
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEIGQL----QNLRVLNLAGNQLTSLPKEIGQLQNLERLDL 116

Query: 276 RDN 278
             N
Sbjct: 117 AGN 119


>gi|255072337|ref|XP_002499843.1| predicted protein [Micromonas sp. RCC299]
 gi|226515105|gb|ACO61101.1| predicted protein [Micromonas sp. RCC299]
          Length = 412

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/221 (38%), Positives = 119/221 (53%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L+ N L+  P+   + T+L  L L +N++T LP  I     L+ L    N LT  ++P
Sbjct: 102 LWLWGNKLTSVPEEIGQLTSLTYLHLGSNQLTSLPAEIGQLTALTELNLTENQLT--NVP 159

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            ++  L +L   NL+ NQL   P +   + +L  LYL +N L  VP +I +L  L  L L
Sbjct: 160 AEIGQLTSLVKLNLTKNQLTNVPAEFWRLTSLGELYLDDNRLTSVPADIGQLTSLTWLGL 219

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
            GN LT +P   G L  LE L LS NQL S+PA I  L+ L+ L L  N+L ++P EI  
Sbjct: 220 YGNQLTSVPAEIGQLTSLELLRLSSNQLTSVPAEIRQLRSLERLDLSGNQLTSVPLEIGQ 279

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L  ++E    L L  N+L +LP EI  L  L +L L DN L
Sbjct: 280 LTAMTE----LYLSYNQLTSLPAEIGQLTSLEKLYLGDNRL 316



 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 87/239 (36%), Positives = 122/239 (51%), Gaps = 15/239 (6%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L  N L+  P    + T+L  L L +NR+T +P  I     L+ L    N LT  S+P +
Sbjct: 173 LTKNQLTNVPAEFWRLTSLGELYLDDNRLTSVPADIGQLTSLTWLGLYGNQLT--SVPAE 230

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L +L++  LS NQL   P +I  + +L+ L L  N L  VP EI +L  +  L L  
Sbjct: 231 IGQLTSLELLRLSSNQLTSVPAEIRQLRSLERLDLSGNQLTSVPLEIGQLTAMTELYLSY 290

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N LT +P   G L  LE L L DN+L S+PA I  L  L  L L++N+L ++P EI  L 
Sbjct: 291 NQLTSLPAEIGQLTSLEKLYLGDNRLTSVPAEIGQLTSLWGLYLNDNQLTSVPAEIGQLT 350

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELAS 300
                L+   L  N+L +LPTE+  L  L E  LR N         +T  P ++LEL +
Sbjct: 351 ----SLEIFQLERNQLTSLPTEVGQLTSLVEFRLRSN--------QLTSVPAAILELEA 397



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 114/214 (53%), Gaps = 7/214 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           ++  L L  N L+  P +  + T+L  L L  N++T +P  I     L  L   +N LT 
Sbjct: 190 SLGELYLDDNRLTSVPADIGQLTSLTWLGLYGNQLTSVPAEIGQLTSLELLRLSSNQLT- 248

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            S+P ++  L++L+  +LSGNQL   P++I  +  +  LYL  N L  +P EI +L  L 
Sbjct: 249 -SVPAEIRQLRSLERLDLSGNQLTSVPLEIGQLTAMTELYLSYNQLTSLPAEIGQLTSLE 307

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L LG N LT +P   G L  L  L L+DNQL S+PA I  L  L+   L  N+L +LPT
Sbjct: 308 KLYLGDNRLTSVPAEIGQLTSLWGLYLNDNQLTSVPAEIGQLTSLEIFQLERNQLTSLPT 367

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           E+  L  L E      L +N+L ++P  I+ L+ 
Sbjct: 368 EVGQLTSLVE----FRLRSNQLTSVPAAILELEA 397



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/217 (35%), Positives = 111/217 (51%), Gaps = 7/217 (3%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMS 123
            N L+  P    + T+LR L L+ N++T +P  I     L  L    N LT  S+P ++ 
Sbjct: 37  RNALTLLPAEIGQLTSLRELCLTGNQLTSVPADIGQLTSLERLWLHGNRLT--SVPAEIG 94

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
               L    L GN+L   P +I  + +L YL+LG+N L  +P EI +L  L  L+L  N 
Sbjct: 95  QFAALIELWLWGNKLTSVPEEIGQLTSLTYLHLGSNQLTSLPAEIGQLTALTELNLTENQ 154

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT++P   G L  L  L L+ NQL ++PA    L  L  L L +N+L ++P +I  L  L
Sbjct: 155 LTNVPAEIGQLTSLVKLNLTKNQLTNVPAEFWRLTSLGELYLDDNRLTSVPADIGQLTSL 214

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +     L L+ N+L ++P EI  L  L  L L  N L
Sbjct: 215 T----WLGLYGNQLTSVPAEIGQLTSLELLRLSSNQL 247



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 70/174 (40%), Positives = 88/174 (50%), Gaps = 7/174 (4%)

Query: 107 IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPR 166
           +ARN L     LP ++  L +L+   L+GNQL   P  I  + +L+ L+L  N L  VP 
Sbjct: 35  VARNALTL---LPAEIGQLTSLRELCLTGNQLTSVPADIGQLTSLERLWLHGNRLTSVPA 91

Query: 167 EINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLH 226
           EI +   L  L L GN LT +P+  G L  L  L L  NQL SLPA I  L  L  L L 
Sbjct: 92  EIGQFAALIELWLWGNKLTSVPEEIGQLTSLTYLHLGSNQLTSLPAEIGQLTALTELNLT 151

Query: 227 NNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            N+L  +P EI  L  L +    L L  N+L  +P E   L  L EL L DN L
Sbjct: 152 ENQLTNVPAEIGQLTSLVK----LNLTKNQLTNVPAEFWRLTSLGELYLDDNRL 201



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/164 (36%), Positives = 84/164 (51%), Gaps = 4/164 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++P ++  L  L+  N++ N L   P +I  + +L+ L L  N L  VP +I +L  L  
Sbjct: 19  AVPAEVGRLTALRELNVARNALTLLPAEIGQLTSLRELCLTGNQLTSVPADIGQLTSLER 78

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L GN LT +P   G    L  L L  N+L S+P  I  L  L  L L +N+L +LP E
Sbjct: 79  LWLHGNRLTSVPAEIGQFAALIELWLWGNKLTSVPEEIGQLTSLTYLHLGSNQLTSLPAE 138

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L  L+E    L L  N+L  +P EI  L  L +L+L  N L
Sbjct: 139 IGQLTALTE----LNLTENQLTNVPAEIGQLTSLVKLNLTKNQL 178


>gi|255080390|ref|XP_002503775.1| predicted protein [Micromonas sp. RCC299]
 gi|226519042|gb|ACO65033.1| predicted protein [Micromonas sp. RCC299]
          Length = 406

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/238 (38%), Positives = 118/238 (49%), Gaps = 26/238 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHL-------------------PQAITNF-P 102
           LY N L+  P+   + T+LR L LS N++T +                   P  I     
Sbjct: 126 LYGNQLTSVPEEIGQLTSLRRLFLSGNQLTSIGLLSALRGLGVSGNQRTSVPAEIGQLTS 185

Query: 103 LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLN 162
           L  L    N LT  S+P ++  L +LK  NL GNQL   P  I  + +L YL+L +N L 
Sbjct: 186 LEVLELHYNQLT--SVPAEIGQLASLKWLNLHGNQLTSLPAGIGQLTSLTYLFLDDNRLT 243

Query: 163 HVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKS 222
            +P EI +L  L  L L  N LT +P   G L  LE L L  NQL SLPA I  L  L  
Sbjct: 244 SLPAEIGQLTSLERLYLRHNQLTSLPAEIGQLASLEWLYLEGNQLTSLPAGIGQLTSLTY 303

Query: 223 LLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L L+ N+L +LP EI  L      LK+L L+ N+L ++P EI  L  L EL L +N L
Sbjct: 304 LYLNENQLTSLPAEIGQLTS----LKALGLNYNQLTSVPAEIGQLAALRELGLFENQL 357



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 71/181 (39%), Positives = 95/181 (52%), Gaps = 3/181 (1%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L+ N L+  P    + T+L  L L +NR+T LP  I     L  L  R+N LT  SLP +
Sbjct: 214 LHGNQLTSLPAGIGQLTSLTYLFLDDNRLTSLPAEIGQLTSLERLYLRHNQLT--SLPAE 271

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L +L+   L GNQL   P  I  + +L YLYL  N L  +P EI +L  L  L L  
Sbjct: 272 IGQLASLEWLYLEGNQLTSLPAGIGQLTSLTYLYLNENQLTSLPAEIGQLTSLKALGLNY 331

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N LT +P   G L  L  L L +NQL S+PA I  L +L+ L L +N+L + P  I  L+
Sbjct: 332 NQLTSVPAEIGQLAALRELGLFENQLTSVPAEIGQLTLLEGLELRHNRLTSEPAAIRELR 391

Query: 242 C 242
            
Sbjct: 392 A 392



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 114/214 (53%), Gaps = 7/214 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           +++ L L++N L+  P    +  +L+ L+L  N++T LP  I     L+ L   +N LT 
Sbjct: 185 SLEVLELHYNQLTSVPAEIGQLASLKWLNLHGNQLTSLPAGIGQLTSLTYLFLDDNRLT- 243

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLP ++  L +L+   L  NQL   P +I  + +L++LYL  N L  +P  I +L  L 
Sbjct: 244 -SLPAEIGQLTSLERLYLRHNQLTSLPAEIGQLASLEWLYLEGNQLTSLPAGIGQLTSLT 302

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +P   G L  L+AL L+ NQL S+PA I  L  L+ L L  N+L ++P 
Sbjct: 303 YLYLNENQLTSLPAEIGQLTSLKALGLNYNQLTSVPAEIGQLAALRELGLFENQLTSVPA 362

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           EI  L      L+ L L +N+L + P  I  L+ 
Sbjct: 363 EIGQLTL----LEGLELRHNRLTSEPAAIRELRA 392



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 68/198 (34%), Positives = 93/198 (46%), Gaps = 28/198 (14%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++P ++  L +L   +L  NQL   P +I  +P+L  L+L  N L  +P EI +L  L  
Sbjct: 41  AVPAEVGQLPSLVKLSLRHNQLTSLPAEIGQLPSLTRLWLAGNQLTSLPAEIGQLMSLEG 100

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL------ 230
           L L GN LT +P     L  L AL L  NQL S+P  I  L  L+ L L  N+L      
Sbjct: 101 LFLNGNQLTSVPAEIWQLTSLRALNLYGNQLTSVPEEIGQLTSLRRLFLSGNQLTSIGLL 160

Query: 231 ------------RT-LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRD 277
                       RT +P EI  L      L+ L LH N+L ++P EI  L  L  L+L  
Sbjct: 161 SALRGLGVSGNQRTSVPAEIGQLTS----LEVLELHYNQLTSVPAEIGQLASLKWLNLHG 216

Query: 278 N-----PLVIRFVSDMTY 290
           N     P  I  ++ +TY
Sbjct: 217 NQLTSLPAGIGQLTSLTY 234


>gi|255070745|ref|XP_002507454.1| predicted protein [Micromonas sp. RCC299]
 gi|226522729|gb|ACO68712.1| predicted protein [Micromonas sp. RCC299]
          Length = 642

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 99/281 (35%), Positives = 136/281 (48%), Gaps = 19/281 (6%)

Query: 13  SSDSDSFKTVSIKTLDFSYSSLDS-----ETLATQIEL-LPNNDYNKKPENID------T 60
           S  ++ ++  S+K L+  Y+ L S       LA   EL L  N     P  +        
Sbjct: 318 SVPAEIWQLTSLKWLNLGYNQLTSVPAEIGQLAALKELCLYGNQLTSVPAEVGRLSALRK 377

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIAR-NNLLTAESLP 119
           L L  N L+  P    + T+LR L LS+N++T +P  I       L+    N LT  S+P
Sbjct: 378 LSLSRNRLTSLPAEIGQLTSLRELRLSDNQLTSVPAEIGQLRALKLLILLGNQLT--SVP 435

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            ++  L +L   +L  N+L   P +I  + +L++LYL  N L  +P EI +L  L    L
Sbjct: 436 AEIGQLASLVGLHLRDNRLTGVPAEIGQLTSLEWLYLAENQLTSLPAEIGQLTSLVESLL 495

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
           GGN LT +P   G L  L  L L DNQL S+PA +  L  L+ L +  N L  LP EI  
Sbjct: 496 GGNQLTSVPAEIGQLTSLTHLDLVDNQLTSVPAEVGRLTALRELNVSRNALTLLPAEIGR 555

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L      LK L L  N+L ++P EI  L  L EL L DN L
Sbjct: 556 LTS----LKGLYLDENELTSVPAEIGQLTSLQELWLNDNQL 592



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/216 (38%), Positives = 116/216 (53%), Gaps = 7/216 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L+  P    + T+L+ L L  N++T +P  I     L  L  ++N LT  S+P ++  
Sbjct: 176 NQLTSVPAWIGQLTSLKELTLYGNQLTSVPAEIGQLAALQWLSLKDNKLT--SVPAEIGQ 233

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ LK+  L+GNQL   P +I  + +L+ L LG+N L  VP EI +L  L  L L  N L
Sbjct: 234 LRALKLLRLNGNQLTSVPAEIGQLASLENLLLGHNQLTSVPAEIGQLTSLRKLYLDHNKL 293

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T +P   G L  L  L L  NQL S+PA I  L  LK L L  N+L ++P EI  L    
Sbjct: 294 TSVPVEIGQLTSLVRLELEGNQLTSVPAEIWQLTSLKWLNLGYNQLTSVPAEIGQLAA-- 351

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             LK L L+ N+L ++P E+  L  L +LSL  N L
Sbjct: 352 --LKELCLYGNQLTSVPAEVGRLSALRKLSLSRNRL 385



 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 85/225 (37%), Positives = 115/225 (51%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           +++ L L  N L+  P    +   L  L L  N++T +P  I     L+ L    N LT 
Sbjct: 121 SLEKLHLEGNQLTSVPAEIGQLVALTELTLYGNQLTSVPAEIGQLTSLTDLYLGCNQLT- 179

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            S+P  +  L +LK   L GNQL   P +I  +  L++L L +N L  VP EI +L  L 
Sbjct: 180 -SVPAWIGQLTSLKELTLYGNQLTSVPAEIGQLAALQWLSLKDNKLTSVPAEIGQLRALK 238

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L L GN LT +P   G L  LE L+L  NQL S+PA I  L  L+ L L +NKL ++P 
Sbjct: 239 LLRLNGNQLTSVPAEIGQLASLENLLLGHNQLTSVPAEIGQLTSLRKLYLDHNKLTSVPV 298

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI  L  L      L L  N+L ++P EI  L  L  L+L  N L
Sbjct: 299 EIGQLTSLVR----LELEGNQLTSVPAEIWQLTSLKWLNLGYNQL 339



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/224 (36%), Positives = 112/224 (50%), Gaps = 28/224 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           +++ LLL HN L+  P    + T+LR L L +N++T                        
Sbjct: 259 SLENLLLGHNQLTSVPAEIGQLTSLRKLYLDHNKLT------------------------ 294

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           S+P ++  L +L    L GNQL   P +I  + +LK+L LG N L  VP EI +L  L  
Sbjct: 295 SVPVEIGQLTSLVRLELEGNQLTSVPAEIWQLTSLKWLNLGYNQLTSVPAEIGQLAALKE 354

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L GN LT +P   G L  L  L LS N+L SLPA I  L  L+ L L +N+L ++P E
Sbjct: 355 LCLYGNQLTSVPAEVGRLSALRKLSLSRNRLTSLPAEIGQLTSLRELRLSDNQLTSVPAE 414

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L+ L   +       N+L ++P EI  L  L  L LRDN L
Sbjct: 415 IGQLRALKLLILL----GNQLTSVPAEIGQLASLVGLHLRDNRL 454



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 104/229 (45%), Gaps = 43/229 (18%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKV 130
            P    + + L+ LDL N  +T                        S+P ++  L +L V
Sbjct: 20  VPAEVGRLSALKVLDLRNYHLT------------------------SVPAEIGQLTSLGV 55

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            +L  NQL   P +I  + +L +LYLG N L  VP  I +L  L  L L  N LT +P  
Sbjct: 56  LHLDNNQLTSVPAEIGQLTSLTHLYLGCNQLTSVPAWIGQLTSLTHLELWSNRLTSVPAE 115

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE----- 245
            G L  LE L L  NQL S+PA I  L  L  L L+ N+L ++P EI  L  L++     
Sbjct: 116 IGQLASLEKLHLEGNQLTSVPAEIGQLVALTELTLYGNQLTSVPAEIGQLTSLTDLYLGC 175

Query: 246 --------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
                          LK L L+ N+L ++P EI  L  L  LSL+DN L
Sbjct: 176 NQLTSVPAWIGQLTSLKELTLYGNQLTSVPAEIGQLAALQWLSLKDNKL 224



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 106/205 (51%), Gaps = 7/205 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSN 124
           N L+  P    +  +L  L L +NR+T +P  I     L  L    N LT  SLP ++  
Sbjct: 429 NQLTSVPAEIGQLASLVGLHLRDNRLTGVPAEIGQLTSLEWLYLAENQLT--SLPAEIGQ 486

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L +L    L GNQL   P +I  + +L +L L +N L  VP E+ +L  L  L++  N+L
Sbjct: 487 LTSLVESLLGGNQLTSVPAEIGQLTSLTHLDLVDNQLTSVPAEVGRLTALRELNVSRNAL 546

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T +P   G L  L+ L L +N+L S+PA I  L  L+ L L++N+L +LP EI  L    
Sbjct: 547 TLLPAEIGRLTSLKGLYLDENELTSVPAEIGQLTSLQELWLNDNQLTSLPAEIGLLIW-- 604

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKC 269
             L  L L  N+L ++P  I  LK 
Sbjct: 605 --LHILRLGGNQLTSMPAAIRKLKA 627



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 66/175 (37%), Positives = 93/175 (53%), Gaps = 6/175 (3%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++P ++  L  LKV +L    L   P +I  + +L  L+L NN L  VP EI +L  L  
Sbjct: 19  AVPAEVGRLSALKVLDLRNYHLTSVPAEIGQLTSLGVLHLDNNQLTSVPAEIGQLTSLTH 78

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L LG N LT +P   G L  L  L L  N+L S+PA I  L  L+ L L  N+L ++P E
Sbjct: 79  LYLGCNQLTSVPAWIGQLTSLTHLELWSNRLTSVPAEIGQLASLEKLHLEGNQLTSVPAE 138

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL--VIRFVSDMT 289
           I  L  L+E    L L+ N+L ++P EI  L  L++L L  N L  V  ++  +T
Sbjct: 139 IGQLVALTE----LTLYGNQLTSVPAEIGQLTSLTDLYLGCNQLTSVPAWIGQLT 189


>gi|417766867|ref|ZP_12414816.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400350673|gb|EJP02931.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 288

 Score =  122 bits (307), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 88/215 (40%), Positives = 116/215 (53%), Gaps = 7/215 (3%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
            N L   P       NL+ L LS N IT LP  I N   L  L    N L  E++PK++ 
Sbjct: 59  ENPLKILPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRL--ETIPKEIG 116

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           NLKNLK  ++  N+L+  P +I ++  LK LYL  N L  +P+EI  L KL  + L  N 
Sbjct: 117 NLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRMHLSTNE 176

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT +P    +L  L  + L DNQ  +LP  I NLK L++L+L  N+L +L  EI  LK  
Sbjct: 177 LTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLK-- 234

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
              LK L L  N+L  LP +I  LK L+ LSL+ N
Sbjct: 235 --NLKELYLEENQLTMLPKQIAALKQLARLSLKGN 267



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 99/192 (51%), Gaps = 7/192 (3%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A +I  LP    N K  N+  L L  N L   P       NL+ L +  N++  LP+ I 
Sbjct: 82  ANEITTLPPEIGNLK--NLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTLPKEIG 139

Query: 100 NFP-LSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           N   L  L ++RN L   + LP+++ NL+ L+  +LS N+L + P +I ++ +L  +YL 
Sbjct: 140 NLKNLKELYLSRNQL---KILPQEIGNLRKLQRMHLSTNELTKLPQEIKNLESLLEIYLY 196

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           +N    +P+EI  L  L  L LG N L  +    G+L  L+ L L +NQL  LP  I+ L
Sbjct: 197 DNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELYLEENQLTMLPKQIAAL 256

Query: 218 KMLKSLLLHNNK 229
           K L  L L  N+
Sbjct: 257 KQLARLSLKGNQ 268



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/134 (41%), Positives = 73/134 (54%), Gaps = 4/134 (2%)

Query: 147 DIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQ 206
           D+  L Y     N L  +P+EI  L  L  L L  N +T +P   G+L  L+ L L+ N+
Sbjct: 48  DVLVLNYRDNEENPLKILPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNR 107

Query: 207 LESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIIT 266
           LE++P  I NLK LK L +  NKL+TLP EI  LK     LK L L  N+L+ LP EI  
Sbjct: 108 LETIPKEIGNLKNLKELSIEWNKLQTLPKEIGNLK----NLKELYLSRNQLKILPQEIGN 163

Query: 267 LKCLSELSLRDNPL 280
           L+ L  + L  N L
Sbjct: 164 LRKLQRMHLSTNEL 177



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 4/101 (3%)

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P   G+L  L+ L LS N++ +LP  I NLK L+ L L+ N+L T+P EI  LK
Sbjct: 60  NPLKILPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLK 119

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
                LK L +  NKL+TLP EI  LK L EL L  N L I
Sbjct: 120 ----NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKI 156



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 79/172 (45%), Gaps = 7/172 (4%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
             ++E +P    N K  N+  L +  N L   P       NL+ L LS N++  LPQ I 
Sbjct: 105 GNRLETIPKEIGNLK--NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIG 162

Query: 100 NFPLSTLIARNNLLTAE--SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           N      + R +L T E   LP+++ NL++L    L  NQ    P +I ++  L+ L LG
Sbjct: 163 NL---RKLQRMHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLG 219

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            N L  +  EI  L  L  L L  N LT +P     L QL  L L  NQ  S
Sbjct: 220 RNQLISLLPEIGNLKNLKELYLEENQLTMLPKQIAALKQLARLSLKGNQFPS 271


>gi|418744883|ref|ZP_13301228.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794214|gb|EKR92124.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 559

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 97/235 (41%), Positives = 126/235 (53%), Gaps = 10/235 (4%)

Query: 50  DYN---KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LST 105
           D+N   K P ++  L L  N L+  P+   K   L  L+LSNNR+T LP  I     L  
Sbjct: 29  DFNEALKNPMDVRILDLSDNQLATLPNEIGKLRKLEWLNLSNNRLTTLPNEIGRLQNLEE 88

Query: 106 LIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
           L   +N LT  + P ++  L+ LK   L+ NQL   P +I  +  L++LYL NN L  +P
Sbjct: 89  LDLFHNRLT--TFPNEIVRLQRLKWLYLADNQLVTLPKEIGTLQKLQHLYLKNNHLATLP 146

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
            EI +L +L  L L  N L  +P   G L  LE L L DNQL +LP  I  L+ L+ L +
Sbjct: 147 SEIGRLQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQEIGQLENLQDLDV 206

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            NN L TLP EI  L+     LK L L NN L TLP EI  L+ L EL+L +N L
Sbjct: 207 SNNHLTTLPNEIGKLRS----LKRLNLSNNLLITLPNEIGKLQNLEELNLSNNQL 257



 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/226 (38%), Positives = 128/226 (56%), Gaps = 5/226 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           + ++ L L +N+L   P+   K  +L+ L L +N++  LPQ I        +  +N   A
Sbjct: 291 QKLEYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPNLNLSNNQLA 350

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LP ++  L+NL+  NL  NQL+  P +I  +  L+YL L NN L  +P EI +L  L 
Sbjct: 351 -TLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQ 409

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L+L  N L  +P+  G L  L+ L L +NQL++LP  I  L+ L+ L L NN+L+TLP 
Sbjct: 410 YLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNLENNQLKTLPN 469

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           EI  L    E L+ L L NN+L+TLP EI  L+ L  L+L  N LV
Sbjct: 470 EIGRL----ENLQYLNLENNQLKTLPNEIGRLQNLKVLNLGGNQLV 511



 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 105/279 (37%), Positives = 137/279 (49%), Gaps = 15/279 (5%)

Query: 5   YGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLY 64
           +    + D+     F       +D     L    LAT    LPN     K   ++ L L 
Sbjct: 16  FCKRDAEDNKVYRDFNEALKNPMDVRILDLSDNQLAT----LPNEI--GKLRKLEWLNLS 69

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLTAESLPKDM 122
           +N L+  P+   +  NL  LDL +NR+T  P  I     L  L +A N L+T   LPK++
Sbjct: 70  NNRLTTLPNEIGRLQNLEELDLFHNRLTTFPNEIVRLQRLKWLYLADNQLVT---LPKEI 126

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             L+ L+   L  N L   P +I  +  LK LYL NN L  +P+EI KL  L  L L  N
Sbjct: 127 GTLQKLQHLYLKNNHLATLPSEIGRLQRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLEDN 186

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            LT +P   G L  L+ L +S+N L +LP  I  L+ LK L L NN L TLP EI  L+ 
Sbjct: 187 QLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNLLITLPNEIGKLQN 246

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L E    L L NN+LRTLP EI  L+ L  L L  N L+
Sbjct: 247 LEE----LNLSNNQLRTLPQEIGQLQELEWLHLEHNQLI 281



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 96/245 (39%), Positives = 129/245 (52%), Gaps = 22/245 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           + +  L LY+N+L   P    K  NL  L L +N++T LPQ I     L  L   NN LT
Sbjct: 153 QRLKRLYLYNNHLMTLPKEIGKLQNLEQLYLEDNQLTTLPQEIGQLENLQDLDVSNNHLT 212

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  L++LK  NLS N L   P +I  +  L+ L L NN L  +P+EI +L +L
Sbjct: 213 --TLPNEIGKLRSLKRLNLSNNLLITLPNEIGKLQNLEELNLSNNQLRTLPQEIGQLQEL 270

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P   G L +LE L L +N LE+LP  I  L+ LK L L +N+L TLP
Sbjct: 271 EWLHLEHNQLITLPQEIGTLQKLEYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLP 330

Query: 235 TEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            EI TL+ L                    E L+ L L NN+L+TLP EI  L+ L  L+L
Sbjct: 331 QEIGTLQNLPNLNLSNNQLATLPNEIGQLENLQYLNLENNQLKTLPNEIGQLENLQYLNL 390

Query: 276 RDNPL 280
            +N L
Sbjct: 391 ENNQL 395



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 95/251 (37%), Positives = 130/251 (51%), Gaps = 30/251 (11%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K +N++ L L  N L+  P    +  NL+ LD+SNN +T LP  I     L  L   NNL
Sbjct: 174 KLQNLEQLYLEDNQLTTLPQEIGQLENLQDLDVSNNHLTTLPNEIGKLRSLKRLNLSNNL 233

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L   +LP ++  L+NL+  NLS NQL   P +I  +  L++L+L +N L  +P+EI  L 
Sbjct: 234 LI--TLPNEIGKLQNLEELNLSNNQLRTLPQEIGQLQELEWLHLEHNQLITLPQEIGTLQ 291

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQL-----------------------ES 209
           KL  L L  N L  +P+  G L  L+ L L  NQL                        +
Sbjct: 292 KLEYLYLKNNHLETLPNEIGKLRSLKRLHLEHNQLITLPQEIGTLQNLPNLNLSNNQLAT 351

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           LP  I  L+ L+ L L NN+L+TLP EI  L    E L+ L L NN+L+TLP EI  L+ 
Sbjct: 352 LPNEIGQLENLQYLNLENNQLKTLPNEIGQL----ENLQYLNLENNQLKTLPNEIGQLEN 407

Query: 270 LSELSLRDNPL 280
           L  L+L +N L
Sbjct: 408 LQYLNLENNQL 418


>gi|418744910|ref|ZP_13301255.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|410794241|gb|EKR92151.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 281

 Score =  122 bits (307), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/225 (40%), Positives = 119/225 (52%), Gaps = 19/225 (8%)

Query: 55  PENIDTL----LLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN 110
           P+ I TL     L    L+  P    +  NL  LDL++N++   PQ I        + R 
Sbjct: 55  PQEIGTLQRLERLDLEKLTTLPKEIGRLQNLEELDLTSNQLAKFPQEIGT------LQRL 108

Query: 111 NLLTAES-----LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
             L+ ES     LPK++  L+ L+  NLS NQL   P +I  + +LK LYL NN L  +P
Sbjct: 109 KWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSNNQLTSLP 168

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
           +EINKL  L  L L  N L ++P   G L  LE L L  NQL +LP  I  L+ L  L L
Sbjct: 169 QEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSNQLGNLPQEIGKLQKLGELEL 228

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
             N+LR+LP EI  L+    KL+ L L +N+L  LP EI TL+ L
Sbjct: 229 SGNQLRSLPQEIGKLR----KLEKLDLTSNQLVKLPQEIGTLQRL 269



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/238 (36%), Positives = 126/238 (52%), Gaps = 25/238 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM 122
           LYH +   F +      ++R L+L +  +T LPQ I        + R +L    +LPK++
Sbjct: 26  LYHRD---FNEALKNPMDVRILNLGHYPLTSLPQEIGTL---QRLERLDLEKLTTLPKEI 79

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             L+NL+  +L+ NQL +FP +I  +  LK+L L +N    +P+EI KL KL  L+L  N
Sbjct: 80  GRLQNLEELDLTSNQLAKFPQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNN 139

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            LT +P+  G L  L+ L LS+NQL SLP  I+ L+ L+ L L  N+L  LP EI  L+ 
Sbjct: 140 QLTTLPNEIGKLRSLKRLYLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRN 199

Query: 243 LS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L                    +KL  L L  N+LR+LP EI  L+ L +L L  N LV
Sbjct: 200 LEWLDLGSNQLGNLPQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLV 257



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/195 (40%), Positives = 106/195 (54%), Gaps = 3/195 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N++ L L  N L+ FP        L+ L L +N+   LP+ I     L  L   NN LT
Sbjct: 83  QNLEELDLTSNQLAKFPQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLT 142

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  L++LK   LS NQL   P +I  +  L+YL L  N L ++P+EI KL  L
Sbjct: 143 --TLPNEIGKLRSLKRLYLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNL 200

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L LG N L ++P   G L +L  L LS NQL SLP  I  L+ L+ L L +N+L  LP
Sbjct: 201 EWLDLGSNQLGNLPQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLP 260

Query: 235 TEIITLKCLSEKLKS 249
            EI TL+ L   LK+
Sbjct: 261 QEIGTLQRLRAGLKT 275



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 99/201 (49%), Gaps = 31/201 (15%)

Query: 23  SIKTLD-FSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
            I TL    + SL+S   AT    LP      K   ++ L L +N L+  P+   K  +L
Sbjct: 101 EIGTLQRLKWLSLESNQFAT----LPKEI--GKLRKLEWLNLSNNQLTTLPNEIGKLRSL 154

Query: 82  RSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           + L LSNN++T LPQ I                        + L+NL+  +L  NQL   
Sbjct: 155 KRLYLSNNQLTSLPQEI------------------------NKLRNLQYLDLFYNQLGNL 190

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P +I  +  L++L LG+N L ++P+EI KL KL  L L GN L  +P   G L +LE L 
Sbjct: 191 PKEIGKLRNLEWLDLGSNQLGNLPQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLD 250

Query: 202 LSDNQLESLPASISNLKMLKS 222
           L+ NQL  LP  I  L+ L++
Sbjct: 251 LTSNQLVKLPQEIGTLQRLRA 271


>gi|255078122|ref|XP_002502641.1| predicted protein [Micromonas sp. RCC299]
 gi|226517906|gb|ACO63899.1| predicted protein [Micromonas sp. RCC299]
          Length = 505

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/240 (37%), Positives = 120/240 (50%), Gaps = 13/240 (5%)

Query: 48  NNDYNKKPENI------DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           NN     P  I      + L L +N L+  P    + T+L  +DLS NR+T +P  I   
Sbjct: 220 NNQLTSVPAEIGQLASLEKLRLDNNQLASVPAEIGRLTSLTEVDLSFNRLTSVPAEIGQL 279

Query: 102 -PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
             L+ L    N LT   +P ++  L +L    L  NQL   P +I  + +L++L LG N 
Sbjct: 280 TSLTELHLHINKLT--RVPAEIGQLASLVRLRLDNNQLTSVPAEIGQLTSLEWLGLGGNQ 337

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  VP EI +L  L  L L GN LT +P   G L  LE L L+ N L S+PA I  L  L
Sbjct: 338 LTSVPAEIGQLASLERLLLYGNQLTSVPAEIGQLTSLEWLGLNGNILTSVPAEIGQLTSL 397

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           K L LH N+L ++P EI  L      L+ L L +N+L  +P EI  L  L+ L L  N L
Sbjct: 398 KELYLHGNELTSVPAEIGQLT----SLQRLYLGDNQLTRVPAEIGQLTSLTVLGLNSNQL 453



 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 90/244 (36%), Positives = 124/244 (50%), Gaps = 15/244 (6%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAE 116
           ++ L L  + L+  P    + T+L  L+L  NR+T +P  I     L  L    N LT  
Sbjct: 75  LERLRLGGSKLTSVPAEIGQLTSLVELNLGGNRLTSVPAEIGQLTSLEKLNLYCNQLTI- 133

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            +P ++  L  L+  NL GNQL   P +I  + +L  L LG N L  +P EI +L  L  
Sbjct: 134 -VPAEIGQLALLERLNLDGNQLTSVPAEIGQLTSLTELDLGRNKLTSLPTEIWQLTSLTC 192

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L GN LT +P   G L  L+ L L +NQL S+PA I  L  L+ L L NN+L ++P E
Sbjct: 193 LHLQGNQLTSVPAEIGQLASLKGLDLYNNQLTSVPAEIGQLASLEKLRLDNNQLASVPAE 252

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
           I  L  L+E    + L  N+L ++P EI  L  L+EL L  N L        T  P  + 
Sbjct: 253 IGRLTSLTE----VDLSFNRLTSVPAEIGQLTSLTELHLHINKL--------TRVPAEIG 300

Query: 297 ELAS 300
           +LAS
Sbjct: 301 QLAS 304



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/246 (36%), Positives = 120/246 (48%), Gaps = 17/246 (6%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ L LY N L+  P    +   L  L+L  N++T +P  I     L+ L + RN L  
Sbjct: 120 SLEKLNLYCNQLTIVPAEIGQLALLERLNLDGNQLTSVPAEIGQLTSLTELDLGRNKL-- 177

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLP ++  L +L   +L GNQL   P +I  + +LK L L NN L  VP EI +L  L
Sbjct: 178 -TSLPTEIWQLTSLTCLHLQGNQLTSVPAEIGQLASLKGLDLYNNQLTSVPAEIGQLASL 236

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P   G L  L  + LS N+L S+PA I  L  L  L LH NKL  +P
Sbjct: 237 EKLRLDNNQLASVPAEIGRLTSLTEVDLSFNRLTSVPAEIGQLTSLTELHLHINKLTRVP 296

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPS 294
            EI  L      L  L L NN+L ++P EI  L  L  L L  N         +T  P  
Sbjct: 297 AEIGQLA----SLVRLRLDNNQLTSVPAEIGQLTSLEWLGLGGN--------QLTSVPAE 344

Query: 295 LLELAS 300
           + +LAS
Sbjct: 345 IGQLAS 350



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 81/220 (36%), Positives = 112/220 (50%), Gaps = 10/220 (4%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L+ N L+  P    +  +L  L L NN++T +P  I     L  L    N LT  S+P +
Sbjct: 287 LHINKLTRVPAEIGQLASLVRLRLDNNQLTSVPAEIGQLTSLEWLGLGGNQLT--SVPAE 344

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L +L+   L GNQL   P +I  + +L++L L  N L  VP EI +L  L  L L G
Sbjct: 345 IGQLASLERLLLYGNQLTSVPAEIGQLTSLEWLGLNGNILTSVPAEIGQLTSLKELYLHG 404

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N LT +P   G L  L+ L L DNQL  +PA I  L  L  L L++N+L +LP EI  L 
Sbjct: 405 NELTSVPAEIGQLTSLQRLYLGDNQLTRVPAEIGQLTSLTVLGLNSNQLSSLPAEIGQLT 464

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLK---CLSELSLRDN 278
            + E+L    L  N+L ++P  I  L+   C   L L D 
Sbjct: 465 SV-ERLD---LRCNELTSVPAAIRELRAAPCFCSLFLDDG 500



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 112/230 (48%), Gaps = 36/230 (15%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKV 130
            P    + + LR LDL N+++T                        S+P ++  L +L+ 
Sbjct: 19  VPAEIGRLSALRELDLYNSQLT------------------------SVPAEIGQLTSLEK 54

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NL  NQL   P +I  +  L+ L LG + L  VP EI +L  L  L+LGGN LT +P  
Sbjct: 55  LNLYCNQLTIVPAEIGQLALLERLRLGGSKLTSVPAEIGQLTSLVELNLGGNRLTSVPAE 114

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
            G L  LE L L  NQL  +PA I  L +L+ L L  N+L ++P EI  L  L+E    L
Sbjct: 115 IGQLTSLEKLNLYCNQLTIVPAEIGQLALLERLNLDGNQLTSVPAEIGQLTSLTE----L 170

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELAS 300
            L  NKL +LPTEI  L  L+ L L+ N         +T  P  + +LAS
Sbjct: 171 DLGRNKLTSLPTEIWQLTSLTCLHLQGN--------QLTSVPAEIGQLAS 212



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 117/242 (48%), Gaps = 30/242 (12%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L  N L+  P    + T+L  LDL  N++T LP  I     L+ L  + N LT  S+P +
Sbjct: 149 LDGNQLTSVPAEIGQLTSLTELDLGRNKLTSLPTEIWQLTSLTCLHLQGNQLT--SVPAE 206

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L +LK  +L  NQL   P +I  + +L+ L L NN L  VP EI +L  L  + L  
Sbjct: 207 IGQLASLKGLDLYNNQLTSVPAEIGQLASLEKLRLDNNQLASVPAEIGRLTSLTEVDLSF 266

Query: 182 NSLTDIPDTFGDLY--------------------QLEALI---LSDNQLESLPASISNLK 218
           N LT +P   G L                     QL +L+   L +NQL S+PA I  L 
Sbjct: 267 NRLTSVPAEIGQLTSLTELHLHINKLTRVPAEIGQLASLVRLRLDNNQLTSVPAEIGQLT 326

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+ L L  N+L ++P EI  L      L+ LLL+ N+L ++P EI  L  L  L L  N
Sbjct: 327 SLEWLGLGGNQLTSVPAEIGQLA----SLERLLLYGNQLTSVPAEIGQLTSLEWLGLNGN 382

Query: 279 PL 280
            L
Sbjct: 383 IL 384



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/164 (38%), Positives = 88/164 (53%), Gaps = 4/164 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++P ++  L  L+  +L  +QL   P +I  + +L+ L L  N L  VP EI +L  L  
Sbjct: 18  AVPAEIGRLSALRELDLYNSQLTSVPAEIGQLTSLEKLNLYCNQLTIVPAEIGQLALLER 77

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L LGG+ LT +P   G L  L  L L  N+L S+PA I  L  L+ L L+ N+L  +P E
Sbjct: 78  LRLGGSKLTSVPAEIGQLTSLVELNLGGNRLTSVPAEIGQLTSLEKLNLYCNQLTIVPAE 137

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L  L E+L    L  N+L ++P EI  L  L+EL L  N L
Sbjct: 138 IGQLALL-ERLN---LDGNQLTSVPAEIGQLTSLTELDLGRNKL 177



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/132 (39%), Positives = 69/132 (52%), Gaps = 4/132 (3%)

Query: 151 LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           ++ L LG+     VP EI +L  L  L L  + LT +P   G L  LE L L  NQL  +
Sbjct: 6   VEVLGLGSWGPCAVPAEIGRLSALRELDLYNSQLTSVPAEIGQLTSLEKLNLYCNQLTIV 65

Query: 211 PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
           PA I  L +L+ L L  +KL ++P EI  L  L E    L L  N+L ++P EI  L  L
Sbjct: 66  PAEIGQLALLERLRLGGSKLTSVPAEIGQLTSLVE----LNLGGNRLTSVPAEIGQLTSL 121

Query: 271 SELSLRDNPLVI 282
            +L+L  N L I
Sbjct: 122 EKLNLYCNQLTI 133



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 4/108 (3%)

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           ++ VL LG      +P   G L  L  L L ++QL S+PA I  L  L+ L L+ N+L  
Sbjct: 5   RVEVLGLGSWGPCAVPAEIGRLSALRELDLYNSQLTSVPAEIGQLTSLEKLNLYCNQLTI 64

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +P EI  L  L E+L+   L  +KL ++P EI  L  L EL+L  N L
Sbjct: 65  VPAEIGQLALL-ERLR---LGGSKLTSVPAEIGQLTSLVELNLGGNRL 108


>gi|418755378|ref|ZP_13311585.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964389|gb|EKO32279.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 277

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/225 (40%), Positives = 119/225 (52%), Gaps = 19/225 (8%)

Query: 55  PENIDTL----LLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN 110
           P+ I TL     L    L+  P    +  NL  LDL++N++   PQ I        + R 
Sbjct: 55  PQEIGTLQRLERLDLEKLTTLPKEIGRLQNLEELDLTSNQLAKFPQEIGT------LQRL 108

Query: 111 NLLTAES-----LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
             L+ ES     LPK++  L+ L+  NLS NQL   P +I  + +LK LYL NN L  +P
Sbjct: 109 KWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLTTLPNEIGKLRSLKRLYLSNNQLTSLP 168

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
           +EINKL  L  L L  N L ++P   G L  LE L L  NQL +LP  I  L+ L  L L
Sbjct: 169 QEINKLRNLQYLDLFYNQLGNLPKEIGKLRNLEWLDLGSNQLGNLPQEIGKLQKLGELEL 228

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
             N+LR+LP EI  L+    KL+ L L +N+L  LP EI TL+ L
Sbjct: 229 SGNQLRSLPQEIGKLR----KLEKLDLTSNQLVKLPQEIGTLQRL 269



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/238 (36%), Positives = 126/238 (52%), Gaps = 25/238 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM 122
           LYH +   F +      ++R L+L +  +T LPQ I        + R +L    +LPK++
Sbjct: 26  LYHRD---FNEALKNPMDVRILNLGHYPLTSLPQEIGTL---QRLERLDLEKLTTLPKEI 79

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             L+NL+  +L+ NQL +FP +I  +  LK+L L +N    +P+EI KL KL  L+L  N
Sbjct: 80  GRLQNLEELDLTSNQLAKFPQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNN 139

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            LT +P+  G L  L+ L LS+NQL SLP  I+ L+ L+ L L  N+L  LP EI  L+ 
Sbjct: 140 QLTTLPNEIGKLRSLKRLYLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRN 199

Query: 243 LS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L                    +KL  L L  N+LR+LP EI  L+ L +L L  N LV
Sbjct: 200 LEWLDLGSNQLGNLPQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLV 257



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/196 (39%), Positives = 107/196 (54%), Gaps = 3/196 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N++ L L  N L+ FP        L+ L L +N+   LP+ I     L  L   NN LT
Sbjct: 83  QNLEELDLTSNQLAKFPQEIGTLQRLKWLSLESNQFATLPKEIGKLRKLEWLNLSNNQLT 142

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  L++LK   LS NQL   P +I  +  L+YL L  N L ++P+EI KL  L
Sbjct: 143 --TLPNEIGKLRSLKRLYLSNNQLTSLPQEINKLRNLQYLDLFYNQLGNLPKEIGKLRNL 200

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L LG N L ++P   G L +L  L LS NQL SLP  I  L+ L+ L L +N+L  LP
Sbjct: 201 EWLDLGSNQLGNLPQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLDLTSNQLVKLP 260

Query: 235 TEIITLKCLSEKLKSL 250
            EI TL+ L   LK++
Sbjct: 261 QEIGTLQRLRAGLKTI 276



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/201 (34%), Positives = 99/201 (49%), Gaps = 31/201 (15%)

Query: 23  SIKTLD-FSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
            I TL    + SL+S   AT    LP      K   ++ L L +N L+  P+   K  +L
Sbjct: 101 EIGTLQRLKWLSLESNQFAT----LPKEI--GKLRKLEWLNLSNNQLTTLPNEIGKLRSL 154

Query: 82  RSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           + L LSNN++T LPQ I                        + L+NL+  +L  NQL   
Sbjct: 155 KRLYLSNNQLTSLPQEI------------------------NKLRNLQYLDLFYNQLGNL 190

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P +I  +  L++L LG+N L ++P+EI KL KL  L L GN L  +P   G L +LE L 
Sbjct: 191 PKEIGKLRNLEWLDLGSNQLGNLPQEIGKLQKLGELELSGNQLRSLPQEIGKLRKLEKLD 250

Query: 202 LSDNQLESLPASISNLKMLKS 222
           L+ NQL  LP  I  L+ L++
Sbjct: 251 LTSNQLVKLPQEIGTLQRLRA 271


>gi|421109036|ref|ZP_15569563.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
 gi|410005803|gb|EKO59587.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
          Length = 353

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 129/223 (57%), Gaps = 7/223 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L   NL+ FP    +F NL+ LDLS N +T L + I     L  L   +N LT 
Sbjct: 42  NVRVLDLSFQNLTTFPKEIGQFKNLQRLDLSGNELTVLSKEIVQLQNLQELSLHSNKLT- 100

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LPK++  LK+LK  +L  NQL   P +++ + TL+ L L  N LN VP+EI +L  L 
Sbjct: 101 -NLPKEIEQLKSLKNLDLFRNQLTTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQ 159

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L L  N +  +P    +L +L+ LIL +N+ +++P     LK L+ L L  N+L ++P 
Sbjct: 160 ILKLDHNQIVSLPKEIEELQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLVSIPK 219

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           EI+ L    + L++L+L  N++  LPTE++ L+ L EL L +N
Sbjct: 220 EILQL----QNLRNLVLDRNQITILPTEVLQLQNLQELYLSEN 258



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 90/249 (36%), Positives = 124/249 (49%), Gaps = 30/249 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN-NLLT 114
           +N+  L L+ N L+  P    +  +L++LDL  N++T +P+ +    L TL   N +L  
Sbjct: 87  QNLQELSLHSNKLTNLPKEIEQLKSLKNLDLFRNQLTTVPKEV--MLLQTLEKLNLSLNR 144

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             ++PK++  LKNL++  L  NQ+   P +I ++  LK L L NN   +VP E  +L  L
Sbjct: 145 LNAVPKEIGQLKNLQILKLDHNQIVSLPKEIEELQELKELILENNRFKNVPGEALQLKNL 204

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALIL-----------------------SDNQLESLP 211
             L+L  N L  IP     L  L  L+L                       S+NQ  SLP
Sbjct: 205 QKLNLSENQLVSIPKEILQLQNLRNLVLDRNQITILPTEVLQLQNLQELYLSENQFTSLP 264

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             I  LK L+ L L+NN+L TLP EI  LK     L+ L L NN+L  LP EI  LK L 
Sbjct: 265 KEIDKLKNLRWLSLNNNRLTTLPKEIGQLK----NLQRLELGNNQLTNLPKEIGQLKNLQ 320

Query: 272 ELSLRDNPL 280
            L L  NPL
Sbjct: 321 RLELDSNPL 329



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/186 (35%), Positives = 99/186 (53%), Gaps = 5/186 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLP-QAITNFPLSTL-IARNNLL 113
           +N+  L L HN +   P    +   L+ L L NNR  ++P +A+    L  L ++ N L+
Sbjct: 156 KNLQILKLDHNQIVSLPKEIEELQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLV 215

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
              S+PK++  L+NL+   L  NQ+   P ++L +  L+ LYL  N    +P+EI+KL  
Sbjct: 216 ---SIPKEILQLQNLRNLVLDRNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDKLKN 272

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  LSL  N LT +P   G L  L+ L L +NQL +LP  I  LK L+ L L +N L + 
Sbjct: 273 LRWLSLNNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKEIGQLKNLQRLELDSNPLSSK 332

Query: 234 PTEIIT 239
             E + 
Sbjct: 333 EKEKVV 338



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 94/185 (50%), Gaps = 19/185 (10%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++L K + N  N++V +LS   L  FP +I     L+ L L  N L  + +EI +L  L 
Sbjct: 31  KNLTKALQNSSNVRVLDLSFQNLTTFPKEIGQFKNLQRLDLSGNELTVLSKEIVQLQNLQ 90

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            LSL  N LT++P     L  L+ L L  NQL ++P  +  L+ L+ L L  N+L  +P 
Sbjct: 91  ELSLHSNKLTNLPKEIEQLKSLKNLDLFRNQLTTVPKEVMLLQTLEKLNLSLNRLNAVPK 150

Query: 236 EIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           EI  LK L                    ++LK L+L NN+ + +P E + LK L +L+L 
Sbjct: 151 EIGQLKNLQILKLDHNQIVSLPKEIEELQELKELILENNRFKNVPGEALQLKNLQKLNLS 210

Query: 277 DNPLV 281
           +N LV
Sbjct: 211 ENQLV 215


>gi|418726059|ref|ZP_13284671.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960840|gb|EKO24593.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 267

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/250 (36%), Positives = 127/250 (50%), Gaps = 7/250 (2%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLK 126
           L   P     F NL  L+L  N++T LP+ I     L  L    N  T  SLPK++  L+
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFT--SLPKEIGQLQ 63

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL+  +L GNQ    P +I  +  L+ L L  N L  +P+EI +L  L  L L GN  T 
Sbjct: 64  NLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTS 123

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P   G L +LEAL L  N+    P  I   + LK L L  ++L+TLP EI+ L    + 
Sbjct: 124 LPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLL----QN 179

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVH 306
           L+SL L +N+L +LP EI  L+ L EL+L+DN L          +   +L L S +  + 
Sbjct: 180 LQSLHLDSNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLK 239

Query: 307 EIDYSQEHLP 316
           E    QE LP
Sbjct: 240 EKQKIQELLP 249



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 109/221 (49%), Gaps = 28/221 (12%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM 122
           L  N  +  P    +  NL  LDL  N+ T                        SLPK++
Sbjct: 47  LAGNQFTSLPKEIGQLQNLERLDLDGNQFT------------------------SLPKEI 82

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             L+NL+V NL+GNQL   P +I  +  L+ L L  N    +P+EI +L KL  L+L  N
Sbjct: 83  GQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHN 142

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
             T  P        L+ L LS +QL++LP  I  L+ L+SL L +N+L +LP EI  L+ 
Sbjct: 143 RFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLPKEIGQLQN 202

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
           L E    L L +NKL+TLP EI  L+ L  L L  N   ++
Sbjct: 203 LFE----LNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLK 239



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 92/174 (52%), Gaps = 3/174 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N  +  P    +  NLR L+L+ N++T LP+ I     L  L    N  T
Sbjct: 63  QNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFT 122

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLPK++  L+ L+  NL  N+   FP +I    +LK+L L  + L  +P+EI  L  L
Sbjct: 123 --SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNL 180

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
             L L  N LT +P   G L  L  L L DN+L++LP  I  L+ L+ L L++N
Sbjct: 181 QSLHLDSNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 234



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 64/123 (52%), Gaps = 4/123 (3%)

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           +G + L  +PR I     L  L+L GN LT +P   G L +L  L L+ NQ  SLP  I 
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIG 60

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            L+ L+ L L  N+  +LP EI  L    + L+ L L  N+L +LP EI  L+ L  L L
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEIGQL----QNLRVLNLAGNQLTSLPKEIGQLQNLERLDL 116

Query: 276 RDN 278
             N
Sbjct: 117 AGN 119


>gi|418741032|ref|ZP_13297408.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|410751627|gb|EKR08604.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 288

 Score =  122 bits (306), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 90/229 (39%), Positives = 124/229 (54%), Gaps = 7/229 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           + P ++  L L  N     P    K  NL+ L+L+ N++T LP+ I     L  L   +N
Sbjct: 43  QNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDN 102

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
             T   LPK++  L+NLK   L  NQL   P +I  +  L+ L L +N    +P+EI +L
Sbjct: 103 QFTI--LPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQL 160

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L+LG N LT +P+  G L  L++L L  NQL +LP  I  L+ L+SL L  N+L 
Sbjct: 161 KNLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLT 220

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           TLP EI  L    + L+SL L +N L TLP  I  LK L +L LR+N L
Sbjct: 221 TLPNEIGQL----QNLQSLYLGSNLLTTLPKGIGQLKNLQKLDLRNNEL 265



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/158 (38%), Positives = 84/158 (53%), Gaps = 3/158 (1%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           +K EN+  L L  N L+  P+   +  NLR L+L++N+   +P+ I     L TL    N
Sbjct: 112 EKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGYN 171

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LTA  LP ++  LKNL+   L  NQL   P +I  +  L+ LYL  N L  +P EI +L
Sbjct: 172 QLTA--LPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQL 229

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
             L  L LG N LT +P   G L  L+ L L +N+L S
Sbjct: 230 QNLQSLYLGSNLLTTLPKGIGQLKNLQKLDLRNNELFS 267



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 88/168 (52%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLS N+ +  P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 34  TYRDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N  T +P     L  L+ L L  NQL +LP  I  LK L+ L L +N+ +T+
Sbjct: 94  LRKLNLYDNQFTILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTI 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  LK     L++L L  N+L  LP EI  LK L  L L  N L 
Sbjct: 154 PKEIGQLK----NLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLT 197



 Score = 38.5 bits (88), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 4/73 (5%)

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           L  +I N   ++ L L  N+ +TLP EI  LK L E    L L+ N+L  LP EI  LK 
Sbjct: 38  LTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQE----LNLNKNQLTILPKEIGQLKN 93

Query: 270 LSELSLRDNPLVI 282
           L +L+L DN   I
Sbjct: 94  LRKLNLYDNQFTI 106


>gi|357408264|ref|YP_004920187.1| hypothetical protein SCAT_p0896 [Streptomyces cattleya NRRL 8057 =
           DSM 46488]
 gi|386352737|ref|YP_006050984.1| hypothetical protein [Streptomyces cattleya NRRL 8057 = DSM 46488]
 gi|337763213|emb|CCB71921.1| Leucine Rich Repeat (LRR)-containing protein [Streptomyces cattleya
           NRRL 8057 = DSM 46488]
 gi|365810816|gb|AEW99031.1| hypothetical protein SCATT_p08380 [Streptomyces cattleya NRRL 8057
           = DSM 46488]
          Length = 320

 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/253 (37%), Positives = 132/253 (52%), Gaps = 14/253 (5%)

Query: 60  TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN---NLLTAE 116
           TL LY N L+  PD       LR L L  NR+T +P ++    L+TL + N   NLLTA 
Sbjct: 62  TLSLYANQLTHVPDALGDAPALRHLSLGGNRLTRVPDSLCR--LTTLRSLNLAENLLTA- 118

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL-KYLYLGNNSLNHVPREINKLCKLH 175
            LP  + +L +L++ +L  N+L   P  + D+P L  YLYL +N    VP  + +L  L 
Sbjct: 119 -LPPRLGDLTDLRMLDLGHNRLHHIPDALGDLPNLTDYLYLSDNGFTSVPASLGRLTGLD 177

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L+L  N LT +PDT GD+  L  L L DN L +LP+++  L  L+ L L +N L  LP 
Sbjct: 178 YLNLTHNHLTTLPDTLGDMAALRELRLYDNHLATLPSTLGRLTRLRELHLADNHLTVLPH 237

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
            +  L      L+ L L NN LR LP  + TL  L  L LR   L  R + D     PSL
Sbjct: 238 TLGDL----HDLRHLDLRNNPLRHLPDTLGTLHRLRHLDLRATHL--RHLPDTLATLPSL 291

Query: 296 LELASRTLKVHEI 308
            +L  R  K+ ++
Sbjct: 292 EKLDLRWTKLDQL 304



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 76/208 (36%), Positives = 103/208 (49%), Gaps = 8/208 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLST--LIARNNLLTAESLPK 120
           L  N L+  P      T+LR LDL +NR+ H+P A+ + P  T  L   +N  T  S+P 
Sbjct: 111 LAENLLTALPPRLGDLTDLRMLDLGHNRLHHIPDALGDLPNLTDYLYLSDNGFT--SVPA 168

Query: 121 DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
            +  L  L   NL+ N L   P  + D+  L+ L L +N L  +P  + +L +L  L L 
Sbjct: 169 SLGRLTGLDYLNLTHNHLTTLPDTLGDMAALRELRLYDNHLATLPSTLGRLTRLRELHLA 228

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
            N LT +P T GDL+ L  L L +N L  LP ++  L  L+ L L    LR LP  + TL
Sbjct: 229 DNHLTVLPHTLGDLHDLRHLDLRNNPLRHLPDTLGTLHRLRHLDLRATHLRHLPDTLATL 288

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLK 268
             L EKL    L   KL  LP  I  L+
Sbjct: 289 PSL-EKLD---LRWTKLDQLPPWIQALR 312



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 79/240 (32%), Positives = 103/240 (42%), Gaps = 52/240 (21%)

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLK 126
            L+ +P   ++ T LR +DL  N + HLP  +   P                        
Sbjct: 23  GLTRWPTGLARMTALRRIDLDGNALPHLPAEVAALP------------------------ 58

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP---------REIN-------- 169
            L   +L  NQL   P  + D P L++L LG N L  VP         R +N        
Sbjct: 59  ALATLSLYANQLTHVPDALGDAPALRHLSLGGNRLTRVPDSLCRLTTLRSLNLAENLLTA 118

Query: 170 ------KLCKLHVLSLGGNSLTDIPDTFGDLYQL-EALILSDNQLESLPASISNLKMLKS 222
                  L  L +L LG N L  IPD  GDL  L + L LSDN   S+PAS+  L  L  
Sbjct: 119 LPPRLGDLTDLRMLDLGHNRLHHIPDALGDLPNLTDYLYLSDNGFTSVPASLGRLTGLDY 178

Query: 223 LLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           L L +N L TLP  +  +  L E    L L++N L TLP+ +  L  L EL L DN L +
Sbjct: 179 LNLTHNHLTTLPDTLGDMAALRE----LRLYDNHLATLPSTLGRLTRLRELHLADNHLTV 234



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 98/221 (44%), Gaps = 29/221 (13%)

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P  ++ +  L+  +L GN L   P ++  +P L  L L  N L HVP  +     L  LS
Sbjct: 28  PTGLARMTALRRIDLDGNALPHLPAEVAALPALATLSLYANQLTHVPDALGDAPALRHLS 87

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           LGGN LT +PD+   L  L +L L++N L +LP  + +L  L+ L L +N+L  +P  + 
Sbjct: 88  LGGNRLTRVPDSLCRLTTLRSLNLAENLLTALPPRLGDLTDLRMLDLGHNRLHHIPDALG 147

Query: 239 TLKCLSE--------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L  L++                     L  L L +N L TLP  +  +  L EL L DN
Sbjct: 148 DLPNLTDYLYLSDNGFTSVPASLGRLTGLDYLNLTHNHLTTLPDTLGDMAALRELRLYDN 207

Query: 279 PLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNL 319
            L            PS L   +R  ++H  D     LP  L
Sbjct: 208 HLATL---------PSTLGRLTRLRELHLADNHLTVLPHTL 239



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 79/165 (47%), Gaps = 3/165 (1%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P   D L L  N  +  P +  + T L  L+L++N +T LP  + +   L  L   +N L
Sbjct: 150 PNLTDYLYLSDNGFTSVPASLGRLTGLDYLNLTHNHLTTLPDTLGDMAALRELRLYDNHL 209

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
              +LP  +  L  L+  +L+ N L   P  + D+  L++L L NN L H+P  +  L +
Sbjct: 210 A--TLPSTLGRLTRLRELHLADNHLTVLPHTLGDLHDLRHLDLRNNPLRHLPDTLGTLHR 267

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           L  L L    L  +PDT   L  LE L L   +L+ LP  I  L+
Sbjct: 268 LRHLDLRATHLRHLPDTLATLPSLEKLDLRWTKLDQLPPWIQALR 312



 Score = 38.1 bits (87), Expect = 7.3,   Method: Compositional matrix adjust.
 Identities = 48/166 (28%), Positives = 69/166 (41%), Gaps = 19/166 (11%)

Query: 164 VPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL 223
           VPR      +   L      LT  P     +  L  + L  N L  LPA ++ L  L +L
Sbjct: 4   VPRAAPNATETRDLVRPRAGLTRWPTGLARMTALRRIDLDGNALPHLPAEVAALPALATL 63

Query: 224 LLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
            L+ N+L  +P  +      +  L+ L L  N+L  +P  +  L  L  L+L +N L   
Sbjct: 64  SLYANQLTHVPDALGD----APALRHLSLGGNRLTRVPDSLCRLTTLRSLNLAENLL--- 116

Query: 284 FVSDMTYKPPSLLELAS-RTL-----KVHEIDYSQEHLPQNLVQYL 323
                T  PP L +L   R L     ++H I  +   LP NL  YL
Sbjct: 117 -----TALPPRLGDLTDLRMLDLGHNRLHHIPDALGDLP-NLTDYL 156


>gi|418691224|ref|ZP_13252327.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400359628|gb|EJP15613.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 267

 Score =  122 bits (305), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/250 (36%), Positives = 127/250 (50%), Gaps = 7/250 (2%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLK 126
           L   P     F NL  L+L  N++T LP+ I     L  L    N  T  SLPK++  L+
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFT--SLPKEIGQLQ 63

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL+  +L GNQ    P +I  +  L+ L L  N L  +P+EI +L  L  L L GN  T 
Sbjct: 64  NLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTS 123

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P   G L +LEAL L  N+    P  I   + LK L L  ++L+TLP EI+ L    + 
Sbjct: 124 LPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLL----QN 179

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVH 306
           L+SL L +N+L +LP EI  L+ L EL+L+DN L          +   +L L S +  + 
Sbjct: 180 LQSLHLDSNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQNLQVLRLYSNSFSLK 239

Query: 307 EIDYSQEHLP 316
           E    QE LP
Sbjct: 240 EKQKIQELLP 249



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 109/221 (49%), Gaps = 28/221 (12%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM 122
           L  N  +  P    +  NL  LDL  N+ T                        SLPK++
Sbjct: 47  LAGNQFTSLPKEIGQLQNLERLDLDGNQFT------------------------SLPKEI 82

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             L+NL+V NL+GNQL   P +I  +  L+ L L  N    +P+EI +L KL  L+L  N
Sbjct: 83  GQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHN 142

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
             T  P        L+ L LS +QL++LP  I  L+ L+SL L +N+L +LP EI  L+ 
Sbjct: 143 RFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLPKEIGQLQN 202

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
           L E    L L +NKL+TLP EI  L+ L  L L  N   ++
Sbjct: 203 LFE----LNLQDNKLKTLPKEIGQLQNLQVLRLYSNSFSLK 239



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 92/174 (52%), Gaps = 3/174 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N  +  P    +  NLR L+L+ N++T LP+ I     L  L    N  T
Sbjct: 63  QNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFT 122

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLPK++  L+ L+  NL  N+   FP +I    +LK+L L  + L  +P+EI  L  L
Sbjct: 123 --SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNL 180

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
             L L  N LT +P   G L  L  L L DN+L++LP  I  L+ L+ L L++N
Sbjct: 181 QSLHLDSNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQNLQVLRLYSN 234



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 64/123 (52%), Gaps = 4/123 (3%)

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           +G + L  +PR I     L  L+L GN LT +P   G L +L  L L+ NQ  SLP  I 
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIG 60

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            L+ L+ L L  N+  +LP EI  L    + L+ L L  N+L +LP EI  L+ L  L L
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEIGQL----QNLRVLNLAGNQLTSLPKEIGQLQNLERLDL 116

Query: 276 RDN 278
             N
Sbjct: 117 AGN 119


>gi|418688697|ref|ZP_13249839.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400362083|gb|EJP18029.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 288

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/215 (40%), Positives = 116/215 (53%), Gaps = 7/215 (3%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
            N L   P       NL+ L LS N IT LP  I N   L  L    N L  E++PK++ 
Sbjct: 59  ENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRL--ETIPKEIG 116

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           NLKNLK  ++  N+L+  P +I ++  LK LYL  N L  +P+EI  L KL  + L  N 
Sbjct: 117 NLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRMHLSTNE 176

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT +P    +L  L  + L DNQ  +LP  I NLK L++L+L  N+L +L  EI  LK  
Sbjct: 177 LTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLK-- 234

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
              LK L L  N+L  LP +I  LK L+ LSL+ N
Sbjct: 235 --NLKELYLEENQLTMLPKQIAALKQLARLSLKGN 267



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 99/192 (51%), Gaps = 7/192 (3%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A +I  LP    N K  N+  L L  N L   P       NL+ L +  N++  LP+ I 
Sbjct: 82  ANEITTLPPEIGNLK--NLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTLPKEIG 139

Query: 100 NFP-LSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           N   L  L ++RN L   + LP+++ NL+ L+  +LS N+L + P +I ++ +L  +YL 
Sbjct: 140 NLKNLKELYLSRNQL---KILPQEIGNLRKLQRMHLSTNELTKLPQEIKNLESLLEIYLY 196

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           +N    +P+EI  L  L  L LG N L  +    G+L  L+ L L +NQL  LP  I+ L
Sbjct: 197 DNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELYLEENQLTMLPKQIAAL 256

Query: 218 KMLKSLLLHNNK 229
           K L  L L  N+
Sbjct: 257 KQLARLSLKGNQ 268



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 56/135 (41%), Positives = 73/135 (54%), Gaps = 4/135 (2%)

Query: 147 DIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQ 206
           D+  L Y     N L  +P+EI  L  L  L L  N +T +P   G+L  L+ L L+ N+
Sbjct: 48  DVLVLNYRDNEENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNR 107

Query: 207 LESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIIT 266
           LE++P  I NLK LK L +  NKL+TLP EI  LK     LK L L  N+L+ LP EI  
Sbjct: 108 LETIPKEIGNLKNLKELSIEWNKLQTLPKEIGNLK----NLKELYLSRNQLKILPQEIGN 163

Query: 267 LKCLSELSLRDNPLV 281
           L+ L  + L  N L 
Sbjct: 164 LRKLQRMHLSTNELT 178



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 4/101 (3%)

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P   G+L  L+ L LS N++ +LP  I NLK L+ L L+ N+L T+P EI  LK
Sbjct: 60  NPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLK 119

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
                LK L +  NKL+TLP EI  LK L EL L  N L I
Sbjct: 120 ----NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKI 156



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 79/172 (45%), Gaps = 7/172 (4%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
             ++E +P    N K  N+  L +  N L   P       NL+ L LS N++  LPQ I 
Sbjct: 105 GNRLETIPKEIGNLK--NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIG 162

Query: 100 NFPLSTLIARNNLLTAE--SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           N      + R +L T E   LP+++ NL++L    L  NQ    P +I ++  L+ L LG
Sbjct: 163 NL---RKLQRMHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLG 219

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            N L  +  EI  L  L  L L  N LT +P     L QL  L L  NQ  S
Sbjct: 220 RNQLISLLPEIGNLKNLKELYLEENQLTMLPKQIAALKQLARLSLKGNQFPS 271


>gi|24215562|ref|NP_713043.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074778|ref|YP_005989096.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196709|gb|AAN50061.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458568|gb|AER03113.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 288

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/215 (40%), Positives = 116/215 (53%), Gaps = 7/215 (3%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
            N L   P       NL+ L LS N IT LP  I N   L  L    N L  E++PK++ 
Sbjct: 59  ENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRL--ETIPKEIG 116

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           NLKNLK  ++  N+L+  P +I ++  LK LYL  N L  +P+EI  L KL  + L  N 
Sbjct: 117 NLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRIHLSTNE 176

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT +P    +L  L  + L DNQ  +LP  I NLK L++L+L  N+L +L  EI  LK  
Sbjct: 177 LTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLK-- 234

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
              LK L L  N+L  LP +I  LK L+ LSL+ N
Sbjct: 235 --NLKELYLEENQLTMLPKQIAALKQLARLSLKGN 267



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 99/192 (51%), Gaps = 7/192 (3%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A +I  LP    N K  N+  L L  N L   P       NL+ L +  N++  LP+ I 
Sbjct: 82  ANEITTLPPEIGNLK--NLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTLPKEIG 139

Query: 100 NFP-LSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           N   L  L ++RN L   + LP+++ NL+ L+  +LS N+L + P +I ++ +L  +YL 
Sbjct: 140 NLKNLKELYLSRNQL---KILPQEIGNLRKLQRIHLSTNELTKLPQEIKNLESLLEIYLY 196

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           +N    +P+EI  L  L  L LG N L  +    G+L  L+ L L +NQL  LP  I+ L
Sbjct: 197 DNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELYLEENQLTMLPKQIAAL 256

Query: 218 KMLKSLLLHNNK 229
           K L  L L  N+
Sbjct: 257 KQLARLSLKGNQ 268



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/135 (41%), Positives = 73/135 (54%), Gaps = 4/135 (2%)

Query: 147 DIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQ 206
           D+  L Y     N L  +P+EI  L  L  L L  N +T +P   G+L  L+ L L+ N+
Sbjct: 48  DVLVLDYRDNEENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNR 107

Query: 207 LESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIIT 266
           LE++P  I NLK LK L +  NKL+TLP EI  LK     LK L L  N+L+ LP EI  
Sbjct: 108 LETIPKEIGNLKNLKELSIEWNKLQTLPKEIGNLK----NLKELYLSRNQLKILPQEIGN 163

Query: 267 LKCLSELSLRDNPLV 281
           L+ L  + L  N L 
Sbjct: 164 LRKLQRIHLSTNELT 178



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 79/172 (45%), Gaps = 7/172 (4%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
             ++E +P    N K  N+  L +  N L   P       NL+ L LS N++  LPQ I 
Sbjct: 105 GNRLETIPKEIGNLK--NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIG 162

Query: 100 NFPLSTLIARNNLLTAE--SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           N      + R +L T E   LP+++ NL++L    L  NQ    P +I ++  L+ L LG
Sbjct: 163 NL---RKLQRIHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLG 219

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            N L  +  EI  L  L  L L  N LT +P     L QL  L L  NQ  S
Sbjct: 220 RNQLISLLPEIGNLKNLKELYLEENQLTMLPKQIAALKQLARLSLKGNQFPS 271


>gi|72080205|ref|XP_792673.1| PREDICTED: uncharacterized protein LOC587871 [Strongylocentrotus
           purpuratus]
          Length = 548

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 151/312 (48%), Gaps = 18/312 (5%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L +N L   P+       L  L L  N +  LP+ I NF  L  L  +NN L  +SLP  
Sbjct: 224 LSNNRLVSLPEEIGLLGGLEQLFLQYNCLEKLPKCIGNFSHLQELDCKNNHL--QSLPST 281

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L  L + N++ N L +    I  +  L+ L   +N L  +P E+  L  L  L +G 
Sbjct: 282 LGRLSILVILNVTNNLLTELTGSIGQLTHLEELCAHSNQLTSLPDEMCNLVNLTALYVGE 341

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P  FG L +L  L LS  +L  LPAS+S    L  + L NN+L +LP +I  L 
Sbjct: 342 NHLRSLPSAFGRLVRLTELDLSSCELTHLPASLSRCTSLNKVWLSNNRLTSLPDQIGRL- 400

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRF----VSDMTYKP----P 293
               +LK L + NN L+  P  +  L+ L   S+  + L+  +     S +T++P    P
Sbjct: 401 ---HRLKELHVRNNPLKYFPASLSYLQ-LYTFSVNQDKLLDEWDQEVTSKLTFRPETSVP 456

Query: 294 SLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCG 353
            L ELA+R +  + +++ +  LP  L + L++   C    C+G FF      + F +   
Sbjct: 457 PLQELAARCISSNGVNWKKGDLPAKLSEMLQNVRQC--SCCEGPFFTYYSSELVFANIGI 514

Query: 354 KYRIPLLQYLCS 365
            +R+PL Q +CS
Sbjct: 515 FHRVPLYQQICS 526



 Score = 45.1 bits (105), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 4/134 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           +++ L  + N L+  PD      NL +L +  N +  LP A      L+ L   +  LT 
Sbjct: 310 HLEELCAHSNQLTSLPDEMCNLVNLTALYVGENHLRSLPSAFGRLVRLTELDLSSCELT- 368

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP  +S   +L    LS N+L   P QI  +  LK L++ NN L + P  ++ L +L+
Sbjct: 369 -HLPASLSRCTSLNKVWLSNNRLTSLPDQIGRLHRLKELHVRNNPLKYFPASLSYL-QLY 426

Query: 176 VLSLGGNSLTDIPD 189
             S+  + L D  D
Sbjct: 427 TFSVNQDKLLDEWD 440


>gi|429961331|gb|ELA40876.1| hypothetical protein VICG_02090, partial [Vittaforma corneae ATCC
           50505]
          Length = 728

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 122/225 (54%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L+ N+L   P    K  +L+ L+L NNR   LP  I N   L  L   +N L  
Sbjct: 185 NLQDLDLHENSLKTLPTEIEKLKSLQKLNLQNNRFESLPAVIGNLTNLQELDLDHNKL-- 242

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++LP  +  LK+L++ +   N+ E  P +++++  L+ L   +N L  +P EI +L  L 
Sbjct: 243 KTLPDTIGELKDLRILSFIHNEFESLPTKVIELRNLRELNFDDNKLKLLPVEIGELKNLQ 302

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L GN+L  +PDT G L  L  L LS N+LESLPA I NL  L+ L L +NKL+TLP 
Sbjct: 303 KLYLSGNNLKTLPDTIGGLKDLRELSLSGNELESLPAVIGNLVNLQYLNLDHNKLKTLPD 362

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            I  LK     L+ L L  +KL  LP  I  L+ L +L L  N L
Sbjct: 363 TIGELK----NLRKLYLGGSKLEILPVAIGELENLQKLHLSGNKL 403



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 95/271 (35%), Positives = 137/271 (50%), Gaps = 16/271 (5%)

Query: 20  KTVSIKTLDFSY-SSLDSETLATQIE--LLPNNDYNKKP------ENIDTLLLYHNNLSF 70
           + +SI + D  Y  S    ++ ++I+  +L NN+    P      EN+  L L  N L  
Sbjct: 47  RKISIHSKDIEYIDSYIRGSVKSEIKELVLSNNNLETLPPVMEELENLKVLFLNVNRLKL 106

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLK 129
            PD   K  +L+ L LS N +  LP  +     L  L    N    E  P  +  LK+L+
Sbjct: 107 LPDEIGKLVSLQELCLSCNELKLLPAKMVELKSLQKLDLWKNRF--EKFPNVVGELKSLQ 164

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
             +LSGN+LE  P  I ++  L+ L L  NSL  +P EI KL  L  L+L  N    +P 
Sbjct: 165 ELDLSGNKLESLPAVIGNLINLQDLDLHENSLKTLPTEIEKLKSLQKLNLQNNRFESLPA 224

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
             G+L  L+ L L  N+L++LP +I  LK L+ L   +N+  +LPT++I L+ L E    
Sbjct: 225 VIGNLTNLQELDLDHNKLKTLPDTIGELKDLRILSFIHNEFESLPTKVIELRNLRE---- 280

Query: 250 LLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L   +NKL+ LP EI  LK L +L L  N L
Sbjct: 281 LNFDDNKLKLLPVEIGELKNLQKLYLSGNNL 311



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/217 (37%), Positives = 112/217 (51%), Gaps = 15/217 (6%)

Query: 72  PDNASKFT----NLRSLDLSNNRITHLPQAITNFPLSTL----IARNNLLTAESLPKDMS 123
           PD    F     N R + + +  I ++   I     S +    ++ NNL   E+LP  M 
Sbjct: 33  PDGIGSFERHSRNERKISIHSKDIEYIDSYIRGSVKSEIKELVLSNNNL---ETLPPVME 89

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            L+NLKV  L+ N+L+  P +I  + +L+ L L  N L  +P ++ +L  L  L L  N 
Sbjct: 90  ELENLKVLFLNVNRLKLLPDEIGKLVSLQELCLSCNELKLLPAKMVELKSLQKLDLWKNR 149

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
               P+  G+L  L+ L LS N+LESLPA I NL  L+ L LH N L+TLPTEI  LK  
Sbjct: 150 FEKFPNVVGELKSLQELDLSGNKLESLPAVIGNLINLQDLDLHENSLKTLPTEIEKLKS- 208

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
              L+ L L NN+  +LP  I  L  L EL L  N L
Sbjct: 209 ---LQKLNLQNNRFESLPAVIGNLTNLQELDLDHNKL 242



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 88/251 (35%), Positives = 120/251 (47%), Gaps = 22/251 (8%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLP--------NNDYNKKPE------NIDTLLLYHNN 67
           ++++ LD   +SL  +TL T+IE L         NN +   P       N+  L L HN 
Sbjct: 184 INLQDLDLHENSL--KTLPTEIEKLKSLQKLNLQNNRFESLPAVIGNLTNLQELDLDHNK 241

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           L   PD   +  +LR L   +N    LP  +     L  L   +N L    LP ++  LK
Sbjct: 242 LKTLPDTIGELKDLRILSFIHNEFESLPTKVIELRNLRELNFDDNKLKL--LPVEIGELK 299

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL+   LSGN L+  P  I  +  L+ L L  N L  +P  I  L  L  L+L  N L  
Sbjct: 300 NLQKLYLSGNNLKTLPDTIGGLKDLRELSLSGNELESLPAVIGNLVNLQYLNLDHNKLKT 359

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +PDT G+L  L  L L  ++LE LP +I  L+ L+ L L  NKL TLP EI   + LS  
Sbjct: 360 LPDTIGELKNLRKLYLGGSKLEILPVAIGELENLQKLHLSGNKLETLPIEI---EKLSGS 416

Query: 247 LKSLLLHNNKL 257
           L+ L L  N +
Sbjct: 417 LRLLNLRGNNI 427


>gi|418666378|ref|ZP_13227803.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|421128065|ref|ZP_15588283.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421136636|ref|ZP_15596738.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410019242|gb|EKO86065.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410434532|gb|EKP83670.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410757871|gb|EKR19476.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 288

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/215 (40%), Positives = 116/215 (53%), Gaps = 7/215 (3%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
            N L   P       NL+ L LS N IT LP  I N   L  L    N L  E++PK++ 
Sbjct: 59  ENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRL--ETIPKEIG 116

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           NLKNLK  ++  N+L+  P +I ++  LK LYL  N L  +P+EI  L KL  + L  N 
Sbjct: 117 NLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRIHLSTNE 176

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT +P    +L  L  + L DNQ  +LP  I NLK L++L+L  N+L +L  EI  LK  
Sbjct: 177 LTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLK-- 234

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
              LK L L  N+L  LP +I  LK L+ LSL+ N
Sbjct: 235 --NLKELYLEENQLTMLPKQIAALKQLARLSLKGN 267



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 99/192 (51%), Gaps = 7/192 (3%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A +I  LP    N K  N+  L L  N L   P       NL+ L +  N++  LP+ I 
Sbjct: 82  ANEITTLPPEIGNLK--NLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTLPKEIG 139

Query: 100 NFP-LSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           N   L  L ++RN L   + LP+++ NL+ L+  +LS N+L + P +I ++ +L  +YL 
Sbjct: 140 NLKNLKELYLSRNQL---KILPQEIGNLRKLQRIHLSTNELTKLPQEIKNLESLLEIYLY 196

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           +N    +P+EI  L  L  L LG N L  +    G+L  L+ L L +NQL  LP  I+ L
Sbjct: 197 DNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELYLEENQLTMLPKQIAAL 256

Query: 218 KMLKSLLLHNNK 229
           K L  L L  N+
Sbjct: 257 KQLARLSLKGNQ 268



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/135 (41%), Positives = 73/135 (54%), Gaps = 4/135 (2%)

Query: 147 DIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQ 206
           D+  L Y     N L  +P+EI  L  L  L L  N +T +P   G+L  L+ L L+ N+
Sbjct: 48  DVLVLNYRDNEENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNR 107

Query: 207 LESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIIT 266
           LE++P  I NLK LK L +  NKL+TLP EI  LK     LK L L  N+L+ LP EI  
Sbjct: 108 LETIPKEIGNLKNLKELSIEWNKLQTLPKEIGNLK----NLKELYLSRNQLKILPQEIGN 163

Query: 267 LKCLSELSLRDNPLV 281
           L+ L  + L  N L 
Sbjct: 164 LRKLQRIHLSTNELT 178



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 4/101 (3%)

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P   G+L  L+ L LS N++ +LP  I NLK L+ L L+ N+L T+P EI  LK
Sbjct: 60  NPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLK 119

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
                LK L +  NKL+TLP EI  LK L EL L  N L I
Sbjct: 120 ----NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKI 156



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 79/172 (45%), Gaps = 7/172 (4%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
             ++E +P    N K  N+  L +  N L   P       NL+ L LS N++  LPQ I 
Sbjct: 105 GNRLETIPKEIGNLK--NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIG 162

Query: 100 NFPLSTLIARNNLLTAE--SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           N      + R +L T E   LP+++ NL++L    L  NQ    P +I ++  L+ L LG
Sbjct: 163 NL---RKLQRIHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLG 219

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            N L  +  EI  L  L  L L  N LT +P     L QL  L L  NQ  S
Sbjct: 220 RNQLISLLPEIGNLKNLKELYLEENQLTMLPKQIAALKQLARLSLKGNQFPS 271


>gi|417783921|ref|ZP_12431633.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|418699650|ref|ZP_13260605.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|409952752|gb|EKO07259.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|410761334|gb|EKR27517.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 288

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 88/215 (40%), Positives = 116/215 (53%), Gaps = 7/215 (3%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
            N L   P       NL+ L LS N IT LP  I N   L  L    N L  E++PK++ 
Sbjct: 59  ENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRL--ETIPKEIG 116

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           NLKNLK  ++  N+L+  P +I ++  LK LYL  N L  +P+EI  L KL  + L  N 
Sbjct: 117 NLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRIHLSTNE 176

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT +P    +L  L  + L DNQ  +LP  I NLK L++L+L  N+L +L  EI  LK  
Sbjct: 177 LTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLK-- 234

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
              LK L L  N+L  LP +I  LK L+ LSL+ N
Sbjct: 235 --NLKELYLEENQLTMLPEQIAALKQLARLSLKGN 267



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 99/192 (51%), Gaps = 7/192 (3%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A +I  LP    N K  N+  L L  N L   P       NL+ L +  N++  LP+ I 
Sbjct: 82  ANEITTLPPEIGNLK--NLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTLPKEIG 139

Query: 100 NFP-LSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           N   L  L ++RN L   + LP+++ NL+ L+  +LS N+L + P +I ++ +L  +YL 
Sbjct: 140 NLKNLKELYLSRNQL---KILPQEIGNLRKLQRIHLSTNELTKLPQEIKNLESLLEIYLY 196

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           +N    +P+EI  L  L  L LG N L  +    G+L  L+ L L +NQL  LP  I+ L
Sbjct: 197 DNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELYLEENQLTMLPEQIAAL 256

Query: 218 KMLKSLLLHNNK 229
           K L  L L  N+
Sbjct: 257 KQLARLSLKGNQ 268



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 56/135 (41%), Positives = 73/135 (54%), Gaps = 4/135 (2%)

Query: 147 DIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQ 206
           D+  L Y     N L  +P+EI  L  L  L L  N +T +P   G+L  L+ L L+ N+
Sbjct: 48  DVLVLNYRDNEENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNR 107

Query: 207 LESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIIT 266
           LE++P  I NLK LK L +  NKL+TLP EI  LK     LK L L  N+L+ LP EI  
Sbjct: 108 LETIPKEIGNLKNLKELSIEWNKLQTLPKEIGNLK----NLKELYLSRNQLKILPQEIGN 163

Query: 267 LKCLSELSLRDNPLV 281
           L+ L  + L  N L 
Sbjct: 164 LRKLQRIHLSTNELT 178



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 4/101 (3%)

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P   G+L  L+ L LS N++ +LP  I NLK L+ L L+ N+L T+P EI  LK
Sbjct: 60  NPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLK 119

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
                LK L +  NKL+TLP EI  LK L EL L  N L I
Sbjct: 120 ----NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKI 156



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 80/172 (46%), Gaps = 7/172 (4%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
             ++E +P    N K  N+  L +  N L   P       NL+ L LS N++  LPQ I 
Sbjct: 105 GNRLETIPKEIGNLK--NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIG 162

Query: 100 NFPLSTLIARNNLLTAE--SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           N      + R +L T E   LP+++ NL++L    L  NQ    P +I ++  L+ L LG
Sbjct: 163 NL---RKLQRIHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLG 219

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            N L  +  EI  L  L  L L  N LT +P+    L QL  L L  NQ  S
Sbjct: 220 RNQLISLLPEIGNLKNLKELYLEENQLTMLPEQIAALKQLARLSLKGNQFPS 271


>gi|255071329|ref|XP_002507746.1| predicted protein [Micromonas sp. RCC299]
 gi|226523021|gb|ACO69004.1| predicted protein [Micromonas sp. RCC299]
          Length = 348

 Score =  122 bits (305), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/254 (35%), Positives = 125/254 (49%), Gaps = 32/254 (12%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI----------------TNF 101
           + TL L  N L   P    + T+LR L+LS+N++T +P  I                T+ 
Sbjct: 88  LSTLNLTSNKLRSLPAEIGQLTSLRRLELSSNQLTSVPAEIGLLTSLRQLHLICNQLTSV 147

Query: 102 P--LSTLIARNNLLTA----ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLY 155
           P  +  L +   L  A     SLP ++  L +L+V  L  N L   P +I  + +L+ L+
Sbjct: 148 PAEIGQLTSLKELSLAGTELRSLPAEIWQLTSLEVLELQNNHLTSVPAEIGQLTSLRELH 207

Query: 156 LGNN-SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASI 214
           LG N  L  VP EI +L  L VL L  N LT  P   G L  L  L L DNQ  S+PA I
Sbjct: 208 LGGNWRLTSVPAEIGQLTSLQVLDLSRNQLTSAPAEIGQLASLTELFLHDNQFTSVPAEI 267

Query: 215 SNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
             L  L+ L L  N+L ++P+EI  L      LK L L +N+L ++P E+  L  L +L 
Sbjct: 268 GQLTSLRELRLGGNQLTSVPSEIGQLTS----LKELWLFDNRLTSVPAEMGQLTSLKKLY 323

Query: 275 LRDN-----PLVIR 283
           LRDN     P V+R
Sbjct: 324 LRDNLLTSVPTVVR 337



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 101/190 (53%), Gaps = 8/190 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTL----IARNNL 112
           ++  L L    L   P    + T+L  L+L NN +T +P  I    L++L    +  N  
Sbjct: 156 SLKELSLAGTELRSLPAEIWQLTSLEVLELQNNHLTSVPAEIGQ--LTSLRELHLGGNWR 213

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  S+P ++  L +L+V +LS NQL   P +I  + +L  L+L +N    VP EI +L 
Sbjct: 214 LT--SVPAEIGQLTSLQVLDLSRNQLTSAPAEIGQLASLTELFLHDNQFTSVPAEIGQLT 271

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L LGGN LT +P   G L  L+ L L DN+L S+PA +  L  LK L L +N L +
Sbjct: 272 SLRELRLGGNQLTSVPSEIGQLTSLKELWLFDNRLTSVPAEMGQLTSLKKLYLRDNLLTS 331

Query: 233 LPTEIITLKC 242
           +PT +  L+ 
Sbjct: 332 VPTVVRELRA 341



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 103/228 (45%), Gaps = 34/228 (14%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKV 130
           +P+ A++  + R +   N R+  L   +  F L             +LP ++  L  L  
Sbjct: 45  WPE-AAQPEDWRGVKWENGRVVEL--ELEGFGL-----------IGALPAEIGRLNALST 90

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NL+ N+L   P +I  + +L+ L L +N L  VP EI  L  L  L L  N LT +P  
Sbjct: 91  LNLTSNKLRSLPAEIGQLTSLRRLELSSNQLTSVPAEIGLLTSLRQLHLICNQLTSVPAE 150

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE----- 245
            G L  L+ L L+  +L SLPA I  L  L+ L L NN L ++P EI  L  L E     
Sbjct: 151 IGQLTSLKELSLAGTELRSLPAEIWQLTSLEVLELQNNHLTSVPAEIGQLTSLRELHLGG 210

Query: 246 ---------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
                           L+ L L  N+L + P EI  L  L+EL L DN
Sbjct: 211 NWRLTSVPAEIGQLTSLQVLDLSRNQLTSAPAEIGQLASLTELFLHDN 258



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/125 (40%), Positives = 64/125 (51%), Gaps = 4/125 (3%)

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
           G   +  +P EI +L  L  L+L  N L  +P   G L  L  L LS NQL S+PA I  
Sbjct: 71  GFGLIGALPAEIGRLNALSTLNLTSNKLRSLPAEIGQLTSLRRLELSSNQLTSVPAEIGL 130

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           L  L+ L L  N+L ++P EI  L      LK L L   +LR+LP EI  L  L  L L+
Sbjct: 131 LTSLRQLHLICNQLTSVPAEIGQLTS----LKELSLAGTELRSLPAEIWQLTSLEVLELQ 186

Query: 277 DNPLV 281
           +N L 
Sbjct: 187 NNHLT 191


>gi|417761388|ref|ZP_12409399.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417774084|ref|ZP_12421957.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418672890|ref|ZP_13234221.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942739|gb|EKN88345.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410576120|gb|EKQ39129.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410580084|gb|EKQ47914.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 267

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 92/250 (36%), Positives = 127/250 (50%), Gaps = 7/250 (2%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLK 126
           L   P     F NL  L+L  N++T LP+ I     L  L    N  T  SLPK++  L+
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFT--SLPKEIGQLQ 63

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL+  +L+GNQ    P +I  +  L+ L L  N L  +P+EI +L  L  L L GN  T 
Sbjct: 64  NLERLDLAGNQFTTLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTF 123

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P   G L +LEAL L  N+    P  I   + LK L L  ++L+TLP EI+ L    + 
Sbjct: 124 LPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLL----QN 179

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVH 306
           L+SL L  N+L +LP EI  L+ L EL+L+DN L          +   +L L S +  + 
Sbjct: 180 LQSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLK 239

Query: 307 EIDYSQEHLP 316
           E    QE LP
Sbjct: 240 EKQKIQELLP 249



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 109/221 (49%), Gaps = 28/221 (12%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM 122
           L  N  +  P    +  NL  LDL+ N+ T                        +LPK++
Sbjct: 47  LAGNQFTSLPKEIGQLQNLERLDLAGNQFT------------------------TLPKEI 82

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             L+NL+V NL+GNQL   P +I  +  L+ L L  N    +P+EI +L KL  L+L  N
Sbjct: 83  GQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTFLPKEIGQLQKLEALNLDHN 142

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
             T  P        L+ L LS +QL++LP  I  L+ L+SL L  N+L +LP EI  L+ 
Sbjct: 143 RFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSLPKEIGQLQN 202

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
           L E    L L +NKL+TLP EI  L+ L  L L  N   ++
Sbjct: 203 LFE----LNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLK 239



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/174 (36%), Positives = 92/174 (52%), Gaps = 3/174 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N  +  P    +  NLR L+L+ N++T LP+ I     L  L    N  T
Sbjct: 63  QNLERLDLAGNQFTTLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFT 122

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+ L+  NL  N+   FP +I    +LK+L L  + L  +P+EI  L  L
Sbjct: 123 F--LPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNL 180

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
             L L GN LT +P   G L  L  L L DN+L++LP  I  L+ L+ L L++N
Sbjct: 181 QSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 234



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/123 (39%), Positives = 64/123 (52%), Gaps = 4/123 (3%)

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           +G + L  +PR I     L  L+L GN LT +P   G L +L  L L+ NQ  SLP  I 
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIG 60

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            L+ L+ L L  N+  TLP EI  L    + L+ L L  N+L +LP EI  L+ L  L L
Sbjct: 61  QLQNLERLDLAGNQFTTLPKEIGQL----QNLRVLNLAGNQLTSLPKEIGQLQNLERLDL 116

Query: 276 RDN 278
             N
Sbjct: 117 AGN 119


>gi|418686455|ref|ZP_13247621.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410738888|gb|EKQ83620.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 380

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 92/250 (36%), Positives = 127/250 (50%), Gaps = 30/250 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N  +  P    K  NL+ L L +N++T LP  I     L  L   +N   
Sbjct: 92  KNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHN--Q 149

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            +++PK++  LKNL+  NL  NQL   P +I  +  L+ LYLG+N L  +P EI +L  L
Sbjct: 150 FKTIPKEIGQLKNLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNL 209

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSD-----------------------NQLESLP 211
             L L  N LT +P+  G L  L++L L                         N+L +LP
Sbjct: 210 QSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNLLTTLPKEIGQLQNLQQLELDYNRLYTLP 269

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             I  LK L++L L  N+L+TLP EI  LK     L+ L L  N+L+TLP EI  L+ L 
Sbjct: 270 KEIGRLKKLRTLSLWGNRLKTLPNEIGQLK----NLQRLHLSYNQLKTLPNEIEQLQNLQ 325

Query: 272 ELSLRDNPLV 281
           EL LR+N L 
Sbjct: 326 ELDLRNNLLT 335



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/247 (38%), Positives = 130/247 (52%), Gaps = 22/247 (8%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L  N L+  P    +  NLR L+L +N+ T LP+ +     L  L   +N 
Sbjct: 67  KLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLKELYLGSNQ 126

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP ++  LKNL+V  L+ NQ +  P +I  +  L+ L LG N L  +P EI +L 
Sbjct: 127 LT--TLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGYNQLTALPNEIGQLK 184

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L LG N LT +P+  G L  L++L LS N+L +LP  I  L+ L+SL L +N L T
Sbjct: 185 NLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNLLTT 244

Query: 233 LPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           LP EI  L+ L                    +KL++L L  N+L+TLP EI  LK L  L
Sbjct: 245 LPKEIGQLQNLQQLELDYNRLYTLPKEIGRLKKLRTLSLWGNRLKTLPNEIGQLKNLQRL 304

Query: 274 SLRDNPL 280
            L  N L
Sbjct: 305 HLSYNQL 311



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 83/211 (39%), Positives = 114/211 (54%), Gaps = 7/211 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L L  N     P    K  NL+ L+L+ N++T LP+ I     L  L   +N  
Sbjct: 45  PLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQF 104

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++  L+NLK   L  NQL   P +I  +  L+ L L +N    +P+EI +L  
Sbjct: 105 TI--LPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKN 162

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+LG N LT +P+  G L  L++L L  NQL +LP  I  L+ L+SL L  N+L TL
Sbjct: 163 LQTLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTL 222

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           P EI  L    + L+SL L +N L TLP EI
Sbjct: 223 PNEIGQL----QNLQSLYLGSNLLTTLPKEI 249



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/252 (37%), Positives = 125/252 (49%), Gaps = 30/252 (11%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           +K EN+  L L  N L+  P+   +  NLR L+L++N+   +P+ I     L TL    N
Sbjct: 112 EKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGYN 171

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LTA  LP ++  LKNL+   L  NQL   P +I  +  L+ LYL  N L  +P EI +L
Sbjct: 172 QLTA--LPNEIGQLKNLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQL 229

Query: 172 CKLHVLSLGGNSLTDIPDTFG-----------------------DLYQLEALILSDNQLE 208
             L  L LG N LT +P   G                        L +L  L L  N+L+
Sbjct: 230 QNLQSLYLGSNLLTTLPKEIGQLQNLQQLELDYNRLYTLPKEIGRLKKLRTLSLWGNRLK 289

Query: 209 SLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLK 268
           +LP  I  LK L+ L L  N+L+TLP EI  L+ L E    L L NN L TLP  I  LK
Sbjct: 290 TLPNEIGQLKNLQRLHLSYNQLKTLPNEIEQLQNLQE----LDLRNNLLTTLPKGIGQLK 345

Query: 269 CLSELSLRDNPL 280
            L +L LR+N L
Sbjct: 346 NLQKLDLRNNEL 357



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 68/166 (40%), Positives = 94/166 (56%), Gaps = 4/166 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++LPK++  LKNL+  NL+ NQL   P +I  +  L+ L L +N    +P+E+ KL  L 
Sbjct: 59  KTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKNLRKLNLYDNQFTILPKEVEKLENLK 118

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L LG N LT +P+  G L  L  L L+ NQ +++P  I  LK L++L L  N+L  LP 
Sbjct: 119 ELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTIPKEIGQLKNLQTLNLGYNQLTALPN 178

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           EI  LK     L+SL L +N+L  LP EI  L+ L  L L  N L 
Sbjct: 179 EIGQLK----NLQSLYLGSNQLTALPNEIGQLQNLQSLYLSTNRLT 220



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 88/168 (52%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLS N+ +  P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 34  TYRDLTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQELNLNKNQLTILPKEIGQLKN 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N  T +P     L  L+ L L  NQL +LP  I  LK L+ L L +N+ +T+
Sbjct: 94  LRKLNLYDNQFTILPKEVEKLENLKELYLGSNQLTTLPNEIGQLKNLRVLELTHNQFKTI 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  LK     L++L L  N+L  LP EI  LK L  L L  N L 
Sbjct: 154 PKEIGQLK----NLQTLNLGYNQLTALPNEIGQLKNLQSLYLGSNQLT 197



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 71/223 (31%), Positives = 105/223 (47%), Gaps = 41/223 (18%)

Query: 17  DSFKTV--------SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNL 68
           + FKT+        +++TL+  Y+ L +         LPN     K  N+ +L L  N L
Sbjct: 148 NQFKTIPKEIGQLKNLQTLNLGYNQLTA---------LPNEIGQLK--NLQSLYLGSNQL 196

Query: 69  SFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA------------ 115
           +  P+   +  NL+SL LS NR+T LP  I     L +L   +NLLT             
Sbjct: 197 TALPNEIGQLQNLQSLYLSTNRLTTLPNEIGQLQNLQSLYLGSNLLTTLPKEIGQLQNLQ 256

Query: 116 ---------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPR 166
                     +LPK++  LK L+  +L GN+L+  P +I  +  L+ L+L  N L  +P 
Sbjct: 257 QLELDYNRLYTLPKEIGRLKKLRTLSLWGNRLKTLPNEIGQLKNLQRLHLSYNQLKTLPN 316

Query: 167 EINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
           EI +L  L  L L  N LT +P   G L  L+ L L +N+L S
Sbjct: 317 EIEQLQNLQELDLRNNLLTTLPKGIGQLKNLQKLDLRNNELFS 359



 Score = 38.1 bits (87), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 40/73 (54%), Gaps = 4/73 (5%)

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           L  +I N   ++ L L  N+ +TLP EI  LK L E    L L+ N+L  LP EI  LK 
Sbjct: 38  LTKAIQNPLDVRVLNLSANRFKTLPKEIGKLKNLQE----LNLNKNQLTILPKEIGQLKN 93

Query: 270 LSELSLRDNPLVI 282
           L +L+L DN   I
Sbjct: 94  LRKLNLYDNQFTI 106


>gi|158335195|ref|YP_001516367.1| hypothetical protein AM1_2038 [Acaryochloris marina MBIC11017]
 gi|158305436|gb|ABW27053.1| leucine-rich repeat containing outermembrane protein, putative
           [Acaryochloris marina MBIC11017]
          Length = 659

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 90/220 (40%), Positives = 123/220 (55%), Gaps = 9/220 (4%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE--SLPK 120
           L    L+  P   ++  NL+SLDL +N +THLPQ I      T + + NL   +  +LP 
Sbjct: 344 LRSTQLNSLPPEIAQLINLQSLDLYDNPLTHLPQEIGTL---THLKKLNLSKTQLTNLPP 400

Query: 121 DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
            +  LK L+  + SGNQL   PI+I  I +LK L L  N L+ +P +I +L  L  L L 
Sbjct: 401 AIMKLKRLQSLDFSGNQLSSLPIEITQIISLKELNLSFNQLSKLPADIGQLNNLQELDLR 460

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
            N L  +P   G L  L++L+L  NQL +LP  I  LK LKSL +H N L +LP EI  L
Sbjct: 461 ENKLDSLPKEIGQLNNLKSLVLRFNQLNTLPPDIGQLKNLKSLSIHGNTLSSLPPEIGKL 520

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
                 LKSL+L +N+L +LP EI  L  L+ L+L +N L
Sbjct: 521 SS----LKSLILRSNRLSSLPPEIGKLHNLNSLNLVENQL 556



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 85/222 (38%), Positives = 118/222 (53%), Gaps = 7/222 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           ++++ L L  N LS  P    +  +L +LDL +NR+  LP  +T    LS L    N L+
Sbjct: 61  KHLEVLNLRDNQLSRLPPEIGQLIHLTTLDLCSNRLNRLPAEVTQLTTLSKLALCFNQLS 120

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP +M+ LK+L+  +L+ NQL   P  +  +  L+ L L NN L  +P EI +L KL
Sbjct: 121 --HLPMEMAQLKHLQSLDLTANQLTNLPSSVTQLKELQTLDLSNNWLKSLPPEIAQLNKL 178

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L+ +P     L  L+ L L  N L SLPA+I+ L  LK L L    L+ LP
Sbjct: 179 RRLDLFRNQLSGLPPEIIKLNNLQTLGLGHNTLSSLPATIAKLTNLKKLDLRATSLKRLP 238

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
            EI+ L     KL+ L L +NKL +LP EI  L  L  L L+
Sbjct: 239 PEILQLT----KLQELDLSDNKLSSLPPEIAQLVNLQSLRLK 276



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/216 (39%), Positives = 116/216 (53%), Gaps = 7/216 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N LS  P   ++  +L+ L+LS N+++ LP  I     L  L  R N L  +SLPK++  
Sbjct: 416 NQLSSLPIEITQIISLKELNLSFNQLSKLPADIGQLNNLQELDLRENKL--DSLPKEIGQ 473

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L NLK   L  NQL   P  I  +  LK L +  N+L+ +P EI KL  L  L L  N L
Sbjct: 474 LNNLKSLVLRFNQLNTLPPDIGQLKNLKSLSIHGNTLSSLPPEIGKLSSLKSLILRSNRL 533

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           + +P   G L+ L +L L +NQL SLP  +  L+ L+ L L NN+LR LP E+  LK L 
Sbjct: 534 SSLPPEIGKLHNLNSLNLVENQLSSLPIEMRKLQNLRELDLRNNRLRNLPLEMGQLKSLG 593

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
                + L +N+L  LP E+  L  L+ LSL  N L
Sbjct: 594 ----LVDLSDNQLSNLPKEMGQLYNLTVLSLDRNQL 625



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/218 (36%), Positives = 115/218 (52%), Gaps = 23/218 (10%)

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L+   LP ++  LK+L+V NL  NQL + P +I  +  L  L L +N LN +P E+ +L 
Sbjct: 48  LSLTQLPLEIGQLKHLEVLNLRDNQLSRLPPEIGQLIHLTTLDLCSNRLNRLPAEVTQLT 107

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L+L  N L+ +P     L  L++L L+ NQL +LP+S++ LK L++L L NN L++
Sbjct: 108 TLSKLALCFNQLSHLPMEMAQLKHLQSLDLTANQLTNLPSSVTQLKELQTLDLSNNWLKS 167

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN-----PLVIRFVSD 287
           LP EI  L     KL+ L L  N+L  LP EII L  L  L L  N     P  I  +++
Sbjct: 168 LPPEIAQLN----KLRRLDLFRNQLSGLPPEIIKLNNLQTLGLGHNTLSSLPATIAKLTN 223

Query: 288 ----------MTYKPPSLLELASRTLKVHEIDYSQEHL 315
                     +   PP +L+L     K+ E+D S   L
Sbjct: 224 LKKLDLRATSLKRLPPEILQLT----KLQELDLSDNKL 257



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 115/225 (51%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ TL L HN LS  P   +K TNL+ LDL    +  LP  I     L  L   +N L+ 
Sbjct: 200 NLQTLGLGHNTLSSLPATIAKLTNLKKLDLRATSLKRLPPEILQLTKLQELDLSDNKLS- 258

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLP +++ L NL+   L   QL   P ++  +  L+ L L  NSL+ +PRE+ KL KL 
Sbjct: 259 -SLPPEIAQLVNLQSLRLKFTQLSHPPAELSQLTHLQELDLSGNSLSSLPREMAKLKKLQ 317

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  NSL ++P     L  L +L L   QL SLP  I+ L  L+SL L++N L  LP 
Sbjct: 318 KLDLSYNSLRNLPTVITQLTTLRSLDLRSTQLNSLPPEIAQLINLQSLDLYDNPLTHLPQ 377

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI TL      LK L L   +L  LP  I+ LK L  L    N L
Sbjct: 378 EIGTLT----HLKKLNLSKTQLTNLPPAIMKLKRLQSLDFSGNQL 418



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 82/224 (36%), Positives = 113/224 (50%), Gaps = 7/224 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           + TL L  N L+  P   ++ T L  L L  N+++HLP  +     L +L    N LT  
Sbjct: 86  LTTLDLCSNRLNRLPAEVTQLTTLSKLALCFNQLSHLPMEMAQLKHLQSLDLTANQLT-- 143

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LP  ++ LK L+  +LS N L+  P +I  +  L+ L L  N L+ +P EI KL  L  
Sbjct: 144 NLPSSVTQLKELQTLDLSNNWLKSLPPEIAQLNKLRRLDLFRNQLSGLPPEIIKLNNLQT 203

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L LG N+L+ +P T   L  L+ L L    L+ LP  I  L  L+ L L +NKL +LP E
Sbjct: 204 LGLGHNTLSSLPATIAKLTNLKKLDLRATSLKRLPPEILQLTKLQELDLSDNKLSSLPPE 263

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L      L+SL L   +L   P E+  L  L EL L  N L
Sbjct: 264 IAQLV----NLQSLRLKFTQLSHPPAELSQLTHLQELDLSGNSL 303



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/162 (37%), Positives = 89/162 (54%), Gaps = 3/162 (1%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ +L+L  N L+  P +  +  NL+SL +  N ++ LP  I     L +LI R+N L+ 
Sbjct: 476 NLKSLVLRFNQLNTLPPDIGQLKNLKSLSIHGNTLSSLPPEIGKLSSLKSLILRSNRLS- 534

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLP ++  L NL   NL  NQL   PI++  +  L+ L L NN L ++P E+ +L  L 
Sbjct: 535 -SLPPEIGKLHNLNSLNLVENQLSSLPIEMRKLQNLRELDLRNNRLRNLPLEMGQLKSLG 593

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           ++ L  N L+++P   G LY L  L L  NQL +LP  I  L
Sbjct: 594 LVDLSDNQLSNLPKEMGQLYNLTVLSLDRNQLSNLPIEIEQL 635



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 115/244 (47%), Gaps = 39/244 (15%)

Query: 19  FKTVSIKTLDFSYSSLDSETLA-TQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASK 77
            K   +++LDFS + L S  +  TQI             ++  L L  N LS  P +  +
Sbjct: 403 MKLKRLQSLDFSGNQLSSLPIEITQII------------SLKELNLSFNQLSKLPADIGQ 450

Query: 78  FTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGN 136
             NL+ LDL  N++  LP+ I     L +L+ R N L   +LP D+  LKNLK  ++ GN
Sbjct: 451 LNNLQELDLRENKLDSLPKEIGQLNNLKSLVLRFNQLN--TLPPDIGQLKNLKSLSIHGN 508

Query: 137 QLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT----------- 185
            L   P +I  + +LK L L +N L+ +P EI KL  L+ L+L  N L+           
Sbjct: 509 TLSSLPPEIGKLSSLKSLILRSNRLSSLPPEIGKLHNLNSLNLVENQLSSLPIEMRKLQN 568

Query: 186 ------------DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
                       ++P   G L  L  + LSDNQL +LP  +  L  L  L L  N+L  L
Sbjct: 569 LRELDLRNNRLRNLPLEMGQLKSLGLVDLSDNQLSNLPKEMGQLYNLTVLSLDRNQLSNL 628

Query: 234 PTEI 237
           P EI
Sbjct: 629 PIEI 632



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/168 (35%), Positives = 87/168 (51%), Gaps = 12/168 (7%)

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            +L G  L Q P++I  +  L+ L L +N L+ +P EI +L  L  L L  N L  +P  
Sbjct: 43  LDLQGLSLTQLPLEIGQLKHLEVLNLRDNQLSRLPPEIGQLIHLTTLDLCSNRLNRLPAE 102

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
              L  L  L L  NQL  LP  ++ LK L+SL L  N+L  LP+ +  LK    +L++L
Sbjct: 103 VTQLTTLSKLALCFNQLSHLPMEMAQLKHLQSLDLTANQLTNLPSSVTQLK----ELQTL 158

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLEL 298
            L NN L++LP EI  L  L  L L        F + ++  PP +++L
Sbjct: 159 DLSNNWLKSLPPEIAQLNKLRRLDL--------FRNQLSGLPPEIIKL 198



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 88/155 (56%), Gaps = 3/155 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ +L ++ N LS  P    K ++L+SL L +NR++ LP  I     L++L    N L+
Sbjct: 498 KNLKSLSIHGNTLSSLPPEIGKLSSLKSLILRSNRLSSLPPEIGKLHNLNSLNLVENQLS 557

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLP +M  L+NL+  +L  N+L   P+++  + +L  + L +N L+++P+E+ +L  L
Sbjct: 558 --SLPIEMRKLQNLRELDLRNNRLRNLPLEMGQLKSLGLVDLSDNQLSNLPKEMGQLYNL 615

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            VLSL  N L+++P     L+    + +  N L S
Sbjct: 616 TVLSLDRNQLSNLPIEIEQLWPSTKITVEGNPLPS 650


>gi|422002227|ref|ZP_16349465.1| hypothetical protein LSS_01912 [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|417259159|gb|EKT88538.1| hypothetical protein LSS_01912 [Leptospira santarosai serovar
           Shermani str. LT 821]
          Length = 433

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 87/226 (38%), Positives = 132/226 (58%), Gaps = 7/226 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           +  L L  N L+  P    +  NL+ +D +NN++  LP+ I N   L  L   +N +T  
Sbjct: 193 LQRLSLSFNQLTAIPKEIEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSNKITI- 251

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            LPK++ NL++L+   LS N++   P +I ++  L+YLYL  N L  +P+EI +L  L V
Sbjct: 252 -LPKEIGNLQHLQKLYLSSNKITILPKEIGNLQKLEYLYLEVNKLTTLPKEIGQLRNLKV 310

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N+L +IP   G+L  L+ L L++N+L +LP  I NL+ L++L L+NNKL TLP E
Sbjct: 311 LYLDHNNLANIPKEIGNLQNLQTLDLNNNKLTTLPKEIGNLQNLQTLDLNNNKLTTLPQE 370

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           I  L+     L+SL L +N L + P EI  L+ L  L L + P ++
Sbjct: 371 IGNLQS----LESLDLSDNPLTSFPEEIGKLQHLKWLRLENIPTLL 412



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 85/230 (36%), Positives = 117/230 (50%), Gaps = 29/230 (12%)

Query: 79  TNLRSLDL-------SNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKV 130
           T++R LDL       SN+ +T LP+ I     L  LI   N LT  ++PK+   L+ L+ 
Sbjct: 138 TDVRVLDLQIREGENSNDPLTTLPKEIGKLQSLQELILGKNQLT--TIPKEFWQLQYLQR 195

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            +LS NQL   P +I  +  L+ +   NN L  +P+EI  L  L  L L  N +T +P  
Sbjct: 196 LSLSFNQLTAIPKEIEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSNKITILPKE 255

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS------ 244
            G+L  L+ L LS N++  LP  I NL+ L+ L L  NKL TLP EI  L+ L       
Sbjct: 256 IGNLQHLQKLYLSSNKITILPKEIGNLQKLEYLYLEVNKLTTLPKEIGQLRNLKVLYLDH 315

Query: 245 -------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                        + L++L L+NNKL TLP EI  L+ L  L L +N L 
Sbjct: 316 NNLANIPKEIGNLQNLQTLDLNNNKLTTLPKEIGNLQNLQTLDLNNNKLT 365



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 76/197 (38%), Positives = 102/197 (51%), Gaps = 12/197 (6%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +++  L L  N ++  P       +L+ L LS+N+IT LP+ I N   L  L    N LT
Sbjct: 237 QHLQKLYLSSNKITILPKEIGNLQHLQKLYLSSNKITILPKEIGNLQKLEYLYLEVNKLT 296

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NLKV  L  N L   P +I ++  L+ L L NN L  +P+EI  L  L
Sbjct: 297 --TLPKEIGQLRNLKVLYLDHNNLANIPKEIGNLQNLQTLDLNNNKLTTLPKEIGNLQNL 354

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G+L  LE+L LSDN L S P  I  L+ LK L L N       
Sbjct: 355 QTLDLNNNKLTTLPQEIGNLQSLESLDLSDNPLTSFPEEIGKLQHLKWLRLEN------- 407

Query: 235 TEIITLKCLSEKLKSLL 251
             I TL    EK++ LL
Sbjct: 408 --IPTLLPQKEKIRKLL 422


>gi|418703877|ref|ZP_13264760.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|418710678|ref|ZP_13271446.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|418714400|ref|ZP_13274960.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410766574|gb|EKR37258.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410768900|gb|EKR44145.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410789343|gb|EKR83045.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 288

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 88/215 (40%), Positives = 116/215 (53%), Gaps = 7/215 (3%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
            N L   P       NL+ L LS N IT LP  I N   L  L    N L  E++PK++ 
Sbjct: 59  ENPLKTLPKEIGNLQNLKKLYLSANEITTLPPEIGNLKNLQVLSLNGNRL--ETIPKEIG 116

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           NLKNLK  ++  N+L+  P +I ++  LK LYL  N L  +P+EI  L KL  + L  N 
Sbjct: 117 NLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRMHLSTNE 176

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT +P    +L  L  + L DNQ  +LP  I NLK L++L+L  N+L +L  EI  LK  
Sbjct: 177 LTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLK-- 234

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
              LK L L  N+L  LP +I  LK L+ LSL+ N
Sbjct: 235 --NLKELYLEENQLTMLPKQIAALKQLARLSLKGN 267



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 99/192 (51%), Gaps = 7/192 (3%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A +I  LP    N K  N+  L L  N L   P       NL+ L +  N++  LP+ I 
Sbjct: 82  ANEITTLPPEIGNLK--NLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTLPKEIG 139

Query: 100 NFP-LSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           N   L  L ++RN L   + LP+++ NL+ L+  +LS N+L + P +I ++ +L  +YL 
Sbjct: 140 NLKNLKELYLSRNQL---KILPQEIGNLRKLQRMHLSTNELTKLPQEIKNLESLLEIYLY 196

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           +N    +P+EI  L  L  L LG N L  +    G+L  L+ L L +NQL  LP  I+ L
Sbjct: 197 DNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELYLEENQLTMLPKQIAAL 256

Query: 218 KMLKSLLLHNNK 229
           K L  L L  N+
Sbjct: 257 KQLARLSLKGNQ 268



 Score = 81.3 bits (199), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/135 (41%), Positives = 73/135 (54%), Gaps = 4/135 (2%)

Query: 147 DIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQ 206
           D+  L Y     N L  +P+EI  L  L  L L  N +T +P   G+L  L+ L L+ N+
Sbjct: 48  DVLVLNYRDNEENPLKTLPKEIGNLQNLKKLYLSANEITTLPPEIGNLKNLQVLSLNGNR 107

Query: 207 LESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIIT 266
           LE++P  I NLK LK L +  NKL+TLP EI  LK     LK L L  N+L+ LP EI  
Sbjct: 108 LETIPKEIGNLKNLKELSIEWNKLQTLPKEIGNLK----NLKELYLSRNQLKILPQEIGN 163

Query: 267 LKCLSELSLRDNPLV 281
           L+ L  + L  N L 
Sbjct: 164 LRKLQRMHLSTNELT 178



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 4/101 (3%)

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P   G+L  L+ L LS N++ +LP  I NLK L+ L L+ N+L T+P EI  LK
Sbjct: 60  NPLKTLPKEIGNLQNLKKLYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLK 119

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
                LK L +  NKL+TLP EI  LK L EL L  N L I
Sbjct: 120 ----NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKI 156



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 79/172 (45%), Gaps = 7/172 (4%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
             ++E +P    N K  N+  L +  N L   P       NL+ L LS N++  LPQ I 
Sbjct: 105 GNRLETIPKEIGNLK--NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIG 162

Query: 100 NFPLSTLIARNNLLTAE--SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           N      + R +L T E   LP+++ NL++L    L  NQ    P +I ++  L+ L LG
Sbjct: 163 NL---RKLQRMHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLG 219

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            N L  +  EI  L  L  L L  N LT +P     L QL  L L  NQ  S
Sbjct: 220 RNQLISLLPEIGNLKNLKELYLEENQLTMLPKQIAALKQLARLSLKGNQFPS 271


>gi|390370821|ref|XP_001195669.2| PREDICTED: uncharacterized protein LOC756567 [Strongylocentrotus
           purpuratus]
          Length = 548

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 98/312 (31%), Positives = 151/312 (48%), Gaps = 18/312 (5%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L +N L   P+       L  L L  N +  LP+ I NF  L  L  +NN L  +SLP  
Sbjct: 224 LSNNRLVSLPEEIGLLGGLEQLFLQYNCLEKLPKCIGNFSHLQELDCKNNHL--QSLPST 281

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L  L + N++ N L +    I  +  L+ L   +N L  +P E+  L  L  L +G 
Sbjct: 282 LGRLSILVILNVTNNLLTELTGSIGQLTHLEELCAHSNQLTSLPDEMCNLVNLTALYVGE 341

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P  FG L +L  L LS  +L  LPAS+S    L  + L NN+L +LP +I  L 
Sbjct: 342 NHLRSLPSAFGRLVRLTELDLSSCELTHLPASLSRCTSLNKVWLSNNRLTSLPDQIGRL- 400

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRF----VSDMTYKP----P 293
               +LK L + NN L+  P  +  L+ L   S+  + L+  +     S +T++P    P
Sbjct: 401 ---HRLKELHVRNNPLKYFPASLSYLQ-LYTFSVNQDKLLDEWDQEVTSKLTFRPETSVP 456

Query: 294 SLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCG 353
            L ELA+R +    +++++  LP  L + L++   C    C+G FF      + F +   
Sbjct: 457 PLQELAARCISSSGVNWNKGDLPAKLSEMLQNVRQC--SCCEGPFFTYYSSELVFANIGI 514

Query: 354 KYRIPLLQYLCS 365
            +R+PL Q +CS
Sbjct: 515 FHRVPLYQQICS 526



 Score = 45.1 bits (105), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 40/134 (29%), Positives = 63/134 (47%), Gaps = 4/134 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           +++ L  + N L+  PD      NL +L +  N +  LP A      L+ L   +  LT 
Sbjct: 310 HLEELCAHSNQLTSLPDEMCNLVNLTALYVGENHLRSLPSAFGRLVRLTELDLSSCELT- 368

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP  +S   +L    LS N+L   P QI  +  LK L++ NN L + P  ++ L +L+
Sbjct: 369 -HLPASLSRCTSLNKVWLSNNRLTSLPDQIGRLHRLKELHVRNNPLKYFPASLSYL-QLY 426

Query: 176 VLSLGGNSLTDIPD 189
             S+  + L D  D
Sbjct: 427 TFSVNQDKLLDEWD 440


>gi|418734750|ref|ZP_13291181.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410772622|gb|EKR52663.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 288

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 88/215 (40%), Positives = 116/215 (53%), Gaps = 7/215 (3%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
            N L   P       NL+ L LS N IT LP  I N   L  L    N L  E++PK++ 
Sbjct: 59  ENPLKTLPKEIGNLQNLKKLYLSANEITTLPPEIGNLKNLQVLSLNGNRL--ETIPKEIG 116

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           NLKNLK  ++  N+L+  P +I ++  LK LYL  N L  +P+EI  L KL  + L  N 
Sbjct: 117 NLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRMHLSTNE 176

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT +P    +L  L  + L DNQ  +LP  I NLK L++L+L  N+L +L  EI  LK  
Sbjct: 177 LTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLK-- 234

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
              LK L L  N+L  LP +I  LK L+ LSL+ N
Sbjct: 235 --NLKELYLEENQLTMLPKQIAALKQLARLSLKGN 267



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 99/192 (51%), Gaps = 7/192 (3%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A +I  LP    N K  N+  L L  N L   P       NL+ L +  N++  LP+ I 
Sbjct: 82  ANEITTLPPEIGNLK--NLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTLPKEIG 139

Query: 100 NFP-LSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           N   L  L ++RN L   + LP+++ NL+ L+  +LS N+L + P +I ++ +L  +YL 
Sbjct: 140 NLKNLKELYLSRNQL---KILPQEIGNLRKLQRMHLSTNELTKLPQEIKNLESLLEIYLY 196

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           +N    +P+EI  L  L  L LG N L  +    G+L  L+ L L +NQL  LP  I+ L
Sbjct: 197 DNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELYLEENQLTMLPKQIAAL 256

Query: 218 KMLKSLLLHNNK 229
           K L  L L  N+
Sbjct: 257 KQLARLSLKGNQ 268



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/135 (41%), Positives = 73/135 (54%), Gaps = 4/135 (2%)

Query: 147 DIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQ 206
           D+  L Y     N L  +P+EI  L  L  L L  N +T +P   G+L  L+ L L+ N+
Sbjct: 48  DVLVLNYRDNEENPLKTLPKEIGNLQNLKKLYLSANEITTLPPEIGNLKNLQVLSLNGNR 107

Query: 207 LESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIIT 266
           LE++P  I NLK LK L +  NKL+TLP EI  LK     LK L L  N+L+ LP EI  
Sbjct: 108 LETIPKEIGNLKNLKELSIEWNKLQTLPKEIGNLK----NLKELYLSRNQLKILPQEIGN 163

Query: 267 LKCLSELSLRDNPLV 281
           L+ L  + L  N L 
Sbjct: 164 LRKLQRMHLSTNELT 178



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 4/101 (3%)

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P   G+L  L+ L LS N++ +LP  I NLK L+ L L+ N+L T+P EI  LK
Sbjct: 60  NPLKTLPKEIGNLQNLKKLYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLK 119

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
                LK L +  NKL+TLP EI  LK L EL L  N L I
Sbjct: 120 ----NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKI 156



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 79/172 (45%), Gaps = 7/172 (4%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
             ++E +P    N K  N+  L +  N L   P       NL+ L LS N++  LPQ I 
Sbjct: 105 GNRLETIPKEIGNLK--NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIG 162

Query: 100 NFPLSTLIARNNLLTAE--SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           N      + R +L T E   LP+++ NL++L    L  NQ    P +I ++  L+ L LG
Sbjct: 163 NL---RKLQRMHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLG 219

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            N L  +  EI  L  L  L L  N LT +P     L QL  L L  NQ  S
Sbjct: 220 RNQLISLLPEIGNLKNLKELYLEENQLTMLPKQIAALKQLARLSLKGNQFPS 271


>gi|418731225|ref|ZP_13289638.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774120|gb|EKR54139.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 297

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 92/250 (36%), Positives = 126/250 (50%), Gaps = 7/250 (2%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           L   P     F NL  L+L  N++T LP+ I     L  L    N LT  SLPK++  L+
Sbjct: 36  LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQLT--SLPKEIGQLQ 93

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL+  +L GNQL   P +I  +  L+ L L  N    +P+EI +L  L  L L GN  T 
Sbjct: 94  NLERLDLDGNQLASLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTS 153

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P   G L +LEAL L  N+    P  I   + LK L L  ++L+ LP EI+ L    + 
Sbjct: 154 LPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKILPKEILLL----QN 209

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVH 306
           L+SL L  N+L +LP EI  L+ L EL+L+DN L          +   +L L S +  + 
Sbjct: 210 LQSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLK 269

Query: 307 EIDYSQEHLP 316
           E    QE LP
Sbjct: 270 EKQKIQELLP 279



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 70/134 (52%), Gaps = 4/134 (2%)

Query: 145 ILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD 204
           IL++     + +G + L  +PR I     L  L+L GN LT +P   G L  L  L L+ 
Sbjct: 20  ILEMSMNTRISMGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAG 79

Query: 205 NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           NQL SLP  I  L+ L+ L L  N+L +LP EI  L    +KL+ L L  N+  +LP EI
Sbjct: 80  NQLTSLPKEIGQLQNLERLDLDGNQLASLPKEIGQL----QKLRVLNLAGNQFTSLPKEI 135

Query: 265 ITLKCLSELSLRDN 278
             L+ L  L L  N
Sbjct: 136 GQLQNLERLDLAGN 149


>gi|456822602|gb|EMF71072.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 237

 Score =  121 bits (304), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 84/203 (41%), Positives = 114/203 (56%), Gaps = 28/203 (13%)

Query: 79  TNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           T++++LDLSNN++                         +LPK++  LK L+  +LS NQL
Sbjct: 40  TDVQTLDLSNNKLI------------------------TLPKEIGQLKELEWLSLSKNQL 75

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
           +  P +I  +  L+YLYL +N L  +P+EI  L +L  L L  N LT +P   G L +L+
Sbjct: 76  KTLPKEIEQLQKLRYLYLSDNQLTTLPKEIGYLKELQELDLSRNQLTTLPKEIGQLKELQ 135

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L LS+NQL +LP  I  LK L+ L L NN+L TLP  I  LK    KL+ L L  N+L 
Sbjct: 136 VLDLSNNQLTTLPNEIEFLKRLQELYLRNNQLTTLPKGIGYLK----KLQKLDLSRNQLT 191

Query: 259 TLPTEIITLKCLSELSLRDNPLV 281
           TLP EI TLK L EL L D P++
Sbjct: 192 TLPKEIETLKKLEELFLDDIPVL 214



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 89/203 (43%), Gaps = 39/203 (19%)

Query: 23  SIKTLDF-SYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
            +K L++ S S    +TL  +IE L    Y         L L  N L+  P        L
Sbjct: 61  QLKELEWLSLSKNQLKTLPKEIEQLQKLRY---------LYLSDNQLTTLPKEIGYLKEL 111

Query: 82  RSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           + LDLS N++T                        +LPK++  LK L+V +LS NQL   
Sbjct: 112 QELDLSRNQLT------------------------TLPKEIGQLKELQVLDLSNNQLTTL 147

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P +I  +  L+ LYL NN L  +P+ I  L KL  L L  N LT +P     L +LE L 
Sbjct: 148 PNEIEFLKRLQELYLRNNQLTTLPKGIGYLKKLQKLDLSRNQLTTLPKEIETLKKLEELF 207

Query: 202 LSDNQLESLPASISNLKMLKSLL 224
           L D     +P   S  K ++ LL
Sbjct: 208 LDD-----IPVLKSQEKKIQKLL 225


>gi|418740905|ref|ZP_13297281.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|410751500|gb|EKR08477.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 400

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 126/228 (55%), Gaps = 9/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLL 113
           +N+  L L  N  + FP    +  NL+ L+L  N++  LP  I     L  L ++ N L 
Sbjct: 138 KNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQL- 196

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
             ++L  ++  L+NL+V +L+ NQL+  P +I  +  L+ L L NN    VP EI +L  
Sbjct: 197 --KTLSAEIGQLQNLQVLDLNDNQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQLKN 254

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L VL LG N    + +  G L  L+ L L++NQL++L A I  LK L+ L L+ N+L TL
Sbjct: 255 LQVLDLGYNQFKTVSEEIGQLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSLNANQLTTL 314

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  LK L E    L L  N+L+TL  EI  LK L +LSLRDN L 
Sbjct: 315 PNEIRQLKNLRE----LHLSYNQLKTLSAEIGQLKNLKKLSLRDNQLT 358



 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 99/280 (35%), Positives = 140/280 (50%), Gaps = 33/280 (11%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           + ++ LD S   L  +TL  +I  L         +N+  L L +N L+  P    +  NL
Sbjct: 46  LDVRVLDLSEQKL--KTLPKEIGQL---------QNLQVLELNNNQLATLPKEIGQLKNL 94

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           + L+L  N++T LP+ I       TL+   N LT  +LPK++  LKNL+   L+ NQ   
Sbjct: 95  QWLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLT--TLPKEIGQLKNLRELYLNTNQFTA 152

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
           FP +I  +  L+ L L  N L  +P EI +L  L  L L  N L  +    G L  L+ L
Sbjct: 153 FPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVL 212

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS---------------- 244
            L+DNQL++LP  I  LK L+ L L+NN+ +T+P EI  LK L                 
Sbjct: 213 DLNDNQLKTLPKEIGQLKNLQVLDLNNNQFKTVPEEIGQLKNLQVLDLGYNQFKTVSEEI 272

Query: 245 ---EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
              + L+ L L+NN+L+TL  EI  LK L  LSL  N L 
Sbjct: 273 GQLKNLQMLFLNNNQLKTLSAEIGQLKNLQMLSLNANQLT 312



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/224 (37%), Positives = 121/224 (54%), Gaps = 7/224 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K P ++  L L    L   P    +  NL+ L+L+NN++  LP+ I     L  L    N
Sbjct: 43  KNPLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQLATLPKEIGQLKNLQWLNLVTN 102

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  +LP+++  L+N +   LS N+L   P +I  +  L+ LYL  N     P+EI +L
Sbjct: 103 QLT--TLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQL 160

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L+L  N L  +P+  G L  L  L LS NQL++L A I  L+ L+ L L++N+L+
Sbjct: 161 KNLQQLNLYANQLKTLPNEIGQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLK 220

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
           TLP EI  LK     L+ L L+NN+ +T+P EI  LK L  L L
Sbjct: 221 TLPKEIGQLK----NLQVLDLNNNQFKTVPEEIGQLKNLQVLDL 260



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/203 (36%), Positives = 108/203 (53%), Gaps = 5/203 (2%)

Query: 78  FTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           FT +++ +  +   T L +A+ N PL   +   +    ++LPK++  L+NL+V  L+ NQ
Sbjct: 22  FTFVQAEEGKSKAYTDLTKALKN-PLDVRVLDLSEQKLKTLPKEIGQLQNLQVLELNNNQ 80

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           L   P +I  +  L++L L  N L  +P EI +L     L L  N LT +P   G L  L
Sbjct: 81  LATLPKEIGQLKNLQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKNRLTTLPKEIGQLKNL 140

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
             L L+ NQ  + P  I  LK L+ L L+ N+L+TLP EI  L+ L E    L L  N+L
Sbjct: 141 RELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLQNLRE----LHLSYNQL 196

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
           +TL  EI  L+ L  L L DN L
Sbjct: 197 KTLSAEIGQLQNLQVLDLNDNQL 219



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 74/199 (37%), Positives = 109/199 (54%), Gaps = 5/199 (2%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A Q++ LPN     + +N+  L L +N L        +  NL+ LDL++N++  LP+ I 
Sbjct: 170 ANQLKTLPNEI--GQLQNLRELHLSYNQLKTLSAEIGQLQNLQVLDLNDNQLKTLPKEIG 227

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L  L   NN    +++P+++  LKNL+V +L  NQ +    +I  +  L+ L+L N
Sbjct: 228 QLKNLQVLDLNNN--QFKTVPEEIGQLKNLQVLDLGYNQFKTVSEEIGQLKNLQMLFLNN 285

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +  EI +L  L +LSL  N LT +P+    L  L  L LS NQL++L A I  LK
Sbjct: 286 NQLKTLSAEIGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLKTLSAEIGQLK 345

Query: 219 MLKSLLLHNNKLRTLPTEI 237
            LK L L +N+L TLP EI
Sbjct: 346 NLKKLSLRDNQLTTLPKEI 364


>gi|418723939|ref|ZP_13282773.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|421120177|ref|ZP_15580491.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|409962737|gb|EKO26471.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|410347263|gb|EKO98182.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|456825272|gb|EMF73668.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 288

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 88/215 (40%), Positives = 116/215 (53%), Gaps = 7/215 (3%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
            N L   P       NL+ L LS N IT LP  I N   L  L    N L  E++PK++ 
Sbjct: 59  ENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRL--ETIPKEIG 116

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           NLKNLK  ++  N+L+  P +I ++  LK LYL  N L  +P+EI  L KL  + L  N 
Sbjct: 117 NLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRIHLSTNE 176

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT +P    +L  L  + L DNQ  +LP  I NLK L++L+L  N+L +L  EI  LK  
Sbjct: 177 LTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLK-- 234

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
              LK L L  N+L  LP +I  LK L+ LSL+ N
Sbjct: 235 --NLKELYLEENQLTMLPKQIAALKQLARLSLKGN 267



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 99/192 (51%), Gaps = 7/192 (3%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A +I  LP    N K  N+  L L  N L   P       NL+ L +  N++  LP+ I 
Sbjct: 82  ANEITTLPPEIGNLK--NLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTLPKEIG 139

Query: 100 NFP-LSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           N   L  L ++RN L   + LP+++ NL+ L+  +LS N+L + P +I ++ +L  +YL 
Sbjct: 140 NLKNLKELYLSRNQL---KILPQEIGNLRKLQRIHLSTNELTKLPQEIKNLESLLEIYLY 196

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           +N    +P+EI  L  L  L LG N L  +    G+L  L+ L L +NQL  LP  I+ L
Sbjct: 197 DNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELYLEENQLTMLPKQIAAL 256

Query: 218 KMLKSLLLHNNK 229
           K L  L L  N+
Sbjct: 257 KQLARLSLKGNQ 268



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/135 (41%), Positives = 73/135 (54%), Gaps = 4/135 (2%)

Query: 147 DIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQ 206
           D+  L Y     N L  +P+EI  L  L  L L  N +T +P   G+L  L+ L L+ N+
Sbjct: 48  DVLVLNYRDNEENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNR 107

Query: 207 LESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIIT 266
           LE++P  I NLK LK L +  NKL+TLP EI  LK     LK L L  N+L+ LP EI  
Sbjct: 108 LETIPKEIGNLKNLKELSIEWNKLQTLPKEIGNLK----NLKELYLSRNQLKILPQEIGN 163

Query: 267 LKCLSELSLRDNPLV 281
           L+ L  + L  N L 
Sbjct: 164 LRKLQRIHLSTNELT 178



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 4/101 (3%)

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P   G+L  L+ L LS N++ +LP  I NLK L+ L L+ N+L T+P EI  LK
Sbjct: 60  NPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLK 119

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
                LK L +  NKL+TLP EI  LK L EL L  N L I
Sbjct: 120 ----NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKI 156



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 79/172 (45%), Gaps = 7/172 (4%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
             ++E +P    N K  N+  L +  N L   P       NL+ L LS N++  LPQ I 
Sbjct: 105 GNRLETIPKEIGNLK--NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIG 162

Query: 100 NFPLSTLIARNNLLTAE--SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           N      + R +L T E   LP+++ NL++L    L  NQ    P +I ++  L+ L LG
Sbjct: 163 NL---RKLQRIHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLG 219

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            N L  +  EI  L  L  L L  N LT +P     L QL  L L  NQ  S
Sbjct: 220 RNQLISLLPEIGNLKNLKELYLEENQLTMLPKQIAALKQLARLSLKGNQFPS 271


>gi|421088197|ref|ZP_15549025.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410003182|gb|EKO53628.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 354

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 128/223 (57%), Gaps = 7/223 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L   NL+ FP    +F NL+ LDLS N +T L + I     L  L   +N LT 
Sbjct: 42  NVRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQELSLHSNKLT- 100

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LPK++  LK+LK  +L  NQL   P +++ + TL+ L L  N LN VP+EI +L  L 
Sbjct: 101 -NLPKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQ 159

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L L  N +  +P     L +L+ LIL +N+ +++P     LK L+ L L  N+L ++P 
Sbjct: 160 ILKLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLVSIPK 219

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           EI+ L    + L+ L+L +N++  LPTE++ L+ L EL L +N
Sbjct: 220 EILQL----QNLRDLVLDHNQITILPTEVLQLQNLQELYLSEN 258



 Score =  107 bits (268), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 111/219 (50%), Gaps = 7/219 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L+ N L   P        L  L+LS NR+  +P+ I     L  L   +N +   SLPK+
Sbjct: 117 LFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQILKLDHNQIV--SLPKE 174

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L+ LK   L  N+ +  P + L +  L+ L L  N L  +P+EI +L  L  L L  
Sbjct: 175 IEGLQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLVSIPKEILQLQNLRDLVLDH 234

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N +T +P     L  L+ L LS+NQ  SLP  I  LK L+ L L NN+L TLP EI  LK
Sbjct: 235 NQITILPTEVLQLQNLQELYLSENQFTSLPKEIDKLKNLRWLSLKNNRLSTLPKEIGQLK 294

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
                L+ L L NN+L  LP EI  LK L  L L  NPL
Sbjct: 295 ----NLQRLELGNNQLTNLPKEIGQLKNLQRLELDSNPL 329



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/185 (35%), Positives = 95/185 (51%), Gaps = 3/185 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLP-QAITNFPLSTLIARNNLLT 114
           +N+  L L HN +   P        L+ L L NNR  ++P +A+    L  L    N L 
Sbjct: 156 KNLQILKLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLV 215

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             S+PK++  L+NL+   L  NQ+   P ++L +  L+ LYL  N    +P+EI+KL  L
Sbjct: 216 --SIPKEILQLQNLRDLVLDHNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDKLKNL 273

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             LSL  N L+ +P   G L  L+ L L +NQL +LP  I  LK L+ L L +N L +  
Sbjct: 274 RWLSLKNNRLSTLPKEIGQLKNLQRLELGNNQLTNLPKEIGQLKNLQRLELDSNPLSSKE 333

Query: 235 TEIIT 239
            E + 
Sbjct: 334 KEKVV 338



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 94/185 (50%), Gaps = 19/185 (10%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++L K + N  N++V +LS   L  FP +I     L+ L L  N L  + +EI +L  L 
Sbjct: 31  KNLTKALQNSSNVRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQ 90

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            LSL  N LT++P     L  L+ L L  NQL ++P  +  L+ L+ L L  N+L  +P 
Sbjct: 91  ELSLHSNKLTNLPKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPK 150

Query: 236 EIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           EI  LK L                    ++LK L+L NN+ + +P E + LK L +L+L 
Sbjct: 151 EIGQLKNLQILKLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEALQLKNLQKLNLS 210

Query: 277 DNPLV 281
           +N LV
Sbjct: 211 ENQLV 215


>gi|417763688|ref|ZP_12411665.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417773732|ref|ZP_12421607.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418674971|ref|ZP_13236266.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409940507|gb|EKN86147.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410576203|gb|EKQ39210.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410578033|gb|EKQ45899.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 288

 Score =  121 bits (304), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 88/215 (40%), Positives = 116/215 (53%), Gaps = 7/215 (3%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
            N L   P       NL+ L LS N IT LP  I N   L  L    N L  E++PK++ 
Sbjct: 59  ENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRL--ETIPKEIG 116

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           NLKNLK  ++  N+L+  P +I ++  LK LYL  N L  +P+EI  L KL  + L  N 
Sbjct: 117 NLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRIHLSTNE 176

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT +P    +L  L  + L DNQ  +LP  I NLK L++L+L  N+L +L  EI  LK  
Sbjct: 177 LTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLK-- 234

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
              LK L L  N+L  LP +I  LK L+ LSL+ N
Sbjct: 235 --NLKELYLEENQLTMLPEQIAALKQLARLSLKGN 267



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 67/192 (34%), Positives = 99/192 (51%), Gaps = 7/192 (3%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A +I  LP    N K  N+  L L  N L   P       NL+ L +  N++  LP+ I 
Sbjct: 82  ANEITTLPPEIGNLK--NLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKLQTLPKEIG 139

Query: 100 NFP-LSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           N   L  L ++RN L   + LP+++ NL+ L+  +LS N+L + P +I ++ +L  +YL 
Sbjct: 140 NLKNLKELYLSRNQL---KILPQEIGNLRKLQRIHLSTNELTKLPQEIKNLESLLEIYLY 196

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           +N    +P+EI  L  L  L LG N L  +    G+L  L+ L L +NQL  LP  I+ L
Sbjct: 197 DNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELYLEENQLTMLPEQIAAL 256

Query: 218 KMLKSLLLHNNK 229
           K L  L L  N+
Sbjct: 257 KQLARLSLKGNQ 268



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/135 (41%), Positives = 73/135 (54%), Gaps = 4/135 (2%)

Query: 147 DIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQ 206
           D+  L Y     N L  +P+EI  L  L  L L  N +T +P   G+L  L+ L L+ N+
Sbjct: 48  DVLVLNYRDNEENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNR 107

Query: 207 LESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIIT 266
           LE++P  I NLK LK L +  NKL+TLP EI  LK     LK L L  N+L+ LP EI  
Sbjct: 108 LETIPKEIGNLKNLKELSIEWNKLQTLPKEIGNLK----NLKELYLSRNQLKILPQEIGN 163

Query: 267 LKCLSELSLRDNPLV 281
           L+ L  + L  N L 
Sbjct: 164 LRKLQRIHLSTNELT 178



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 47/101 (46%), Positives = 59/101 (58%), Gaps = 4/101 (3%)

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P   G+L  L+ L LS N++ +LP  I NLK L+ L L+ N+L T+P EI  LK
Sbjct: 60  NPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLK 119

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
                LK L +  NKL+TLP EI  LK L EL L  N L I
Sbjct: 120 ----NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKI 156



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 58/172 (33%), Positives = 80/172 (46%), Gaps = 7/172 (4%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
             ++E +P    N K  N+  L +  N L   P       NL+ L LS N++  LPQ I 
Sbjct: 105 GNRLETIPKEIGNLK--NLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIG 162

Query: 100 NFPLSTLIARNNLLTAE--SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           N      + R +L T E   LP+++ NL++L    L  NQ    P +I ++  L+ L LG
Sbjct: 163 NL---RKLQRIHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLG 219

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            N L  +  EI  L  L  L L  N LT +P+    L QL  L L  NQ  S
Sbjct: 220 RNQLISLLPEIGNLKNLKELYLEENQLTMLPEQIAALKQLARLSLKGNQFPS 271


>gi|124010200|ref|ZP_01694856.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123983744|gb|EAY24171.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 356

 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 103/266 (38%), Positives = 140/266 (52%), Gaps = 12/266 (4%)

Query: 17  DSFKTVSIKTLDFSYSSLDSETL-ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNA 75
           DS   +S +  +F   SL   T+   Q++ LP  +   + EN++ L L  + L+  P + 
Sbjct: 59  DSLTVLSSRIAEFK--SLKRLTIECKQLKELP--EEIGELENLEILTLSGSKLTSLPKSI 114

Query: 76  SKFTNLRSLDLSNNRITHLPQAITNFPLSTLIA-RNNLLTAESLPKDMSNLKNLKVFNLS 134
            K   L+ LDL+  ++  LP+ I N  L+ L   R  L     LPK++  LKNL    L+
Sbjct: 115 GKLKKLKILDLNRGKLISLPKEIGN--LTNLYKLRVGLNQLVELPKEIGQLKNLISLTLN 172

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
           GNQL + P +I  +  L  LYLG N L  +P+ I  L +L  L LG N+L  +PD    L
Sbjct: 173 GNQLVELPQEIGSLGKLALLYLGGNKLECLPKSIGNLRELESLHLGYNNLKGLPDEIQQL 232

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
             L  L L +NQL +LPA I  LK LK + L +N+LR LP EI  L  L E    L L N
Sbjct: 233 TNLGWLYLENNQLTALPAGIGGLKKLKKMGLQDNRLRKLPKEIGQLGNLQE----LNLKN 288

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPL 280
           N+LR LP EI  L  L E  L +N L
Sbjct: 289 NRLRRLPEEIDQLTSLREFDLENNRL 314



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 95/190 (50%), Gaps = 3/190 (1%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+  L +  N L   P    +  NL SL L+ N++  LPQ I +   L+ L    N L  
Sbjct: 142 NLYKLRVGLNQLVELPKEIGQLKNLISLTLNGNQLVELPQEIGSLGKLALLYLGGNKL-- 199

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           E LPK + NL+ L+  +L  N L+  P +I  +  L +LYL NN L  +P  I  L KL 
Sbjct: 200 ECLPKSIGNLRELESLHLGYNNLKGLPDEIQQLTNLGWLYLENNQLTALPAGIGGLKKLK 259

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            + L  N L  +P   G L  L+ L L +N+L  LP  I  L  L+   L NN+LR LP 
Sbjct: 260 KMGLQDNRLRKLPKEIGQLGNLQELNLKNNRLRRLPEEIDQLTSLREFDLENNRLRNLPE 319

Query: 236 EIITLKCLSE 245
           EI  L  L +
Sbjct: 320 EIGQLANLQK 329



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/131 (41%), Positives = 72/131 (54%), Gaps = 4/131 (3%)

Query: 151 LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           LK + L N+SL  +   I +   L  L++    L ++P+  G+L  LE L LS ++L SL
Sbjct: 51  LKSMVLRNDSLTVLSSRIAEFKSLKRLTIECKQLKELPEEIGELENLEILTLSGSKLTSL 110

Query: 211 PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
           P SI  LK LK L L+  KL +LP EI  L  L  KL+  L   N+L  LP EI  LK L
Sbjct: 111 PKSIGKLKKLKILDLNRGKLISLPKEIGNLTNLY-KLRVGL---NQLVELPKEIGQLKNL 166

Query: 271 SELSLRDNPLV 281
             L+L  N LV
Sbjct: 167 ISLTLNGNQLV 177


>gi|417781236|ref|ZP_12428988.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778487|gb|EKR63113.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 400

 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 98/240 (40%), Positives = 126/240 (52%), Gaps = 11/240 (4%)

Query: 42  QIELLPNN-DYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN 100
           Q++ LP   +Y +K   +D+    +N L+  P       NL  L LSNN +T LP+ I  
Sbjct: 143 QLKTLPKEIEYLQKLRELDS---TNNPLTTLPKEIGYLKNLEELILSNNELTTLPKEIGK 199

Query: 101 FP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
              L  L    +LLT  +LP D+  LKNL+   L+  +L   P  I  +  L+ LYL +N
Sbjct: 200 LKNLQVLYLGADLLT--TLPNDIGYLKNLQKLYLNTGRLTTLPNDIGYLKNLQELYLSDN 257

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L  +P +I KL  L VL L GN LT +P  FG L  L  L LS NQL +LP     L+ 
Sbjct: 258 QLKTLPNDIGKLKNLQVLHLSGNQLTTLPKEFGKLQSLRELNLSGNQLTTLPKEFGKLQS 317

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L+ L L  N+L TLP EI  L+ L E    L L  N+L TLP EI  LK L EL L D P
Sbjct: 318 LRELNLSGNQLTTLPKEIGKLQSLRE----LNLSGNQLTTLPKEIGHLKNLQELYLDDIP 373



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/217 (41%), Positives = 117/217 (53%), Gaps = 8/217 (3%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMS 123
           HNN    P    +  NL  L LSNN++  LP+ I     L  L   NN LT  ++P ++ 
Sbjct: 50  HNN-ETLPKEIGELQNLTKLYLSNNQLQALPKEIGKLKKLQVLTLNNNQLT--TIPNEIG 106

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            LK L+V  L  NQL+  P +I  +  L+ LYL +N L  +P+EI  L KL  L    N 
Sbjct: 107 ELKKLQVLYLDNNQLQALPKEIGKLKKLQVLYLNDNQLKTLPKEIEYLQKLRELDSTNNP 166

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT +P   G L  LE LILS+N+L +LP  I  LK L+ L L  + L TLP +I  LK  
Sbjct: 167 LTTLPKEIGYLKNLEELILSNNELTTLPKEIGKLKNLQVLYLGADLLTTLPNDIGYLK-- 224

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
              L+ L L+  +L TLP +I  LK L EL L DN L
Sbjct: 225 --NLQKLYLNTGRLTTLPNDIGYLKNLQELYLSDNQL 259



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 89/225 (39%), Positives = 120/225 (53%), Gaps = 7/225 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAE 116
           +  L L +N L   P    K   L+ L L++N++  LP+ I     L  L + NN LT  
Sbjct: 111 LQVLYLDNNQLQALPKEIGKLKKLQVLYLNDNQLKTLPKEIEYLQKLRELDSTNNPLT-- 168

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++  LKNL+   LS N+L   P +I  +  L+ LYLG + L  +P +I  L  L  
Sbjct: 169 TLPKEIGYLKNLEELILSNNELTTLPKEIGKLKNLQVLYLGADLLTTLPNDIGYLKNLQK 228

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L    LT +P+  G L  L+ L LSDNQL++LP  I  LK L+ L L  N+L TLP E
Sbjct: 229 LYLNTGRLTTLPNDIGYLKNLQELYLSDNQLKTLPNDIGKLKNLQVLHLSGNQLTTLPKE 288

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
              L+ L E    L L  N+L TLP E   L+ L EL+L  N L 
Sbjct: 289 FGKLQSLRE----LNLSGNQLTTLPKEFGKLQSLRELNLSGNQLT 329



 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 95/247 (38%), Positives = 121/247 (48%), Gaps = 13/247 (5%)

Query: 42  QIELLPNNDYNKKPENIDTL----LLY--HNNLSFFPDNASKFTNLRSLDLSNNRITHLP 95
           Q+  L NN     P+ I  L    +LY   N L   P        LR LD +NN +T LP
Sbjct: 112 QVLYLDNNQLQALPKEIGKLKKLQVLYLNDNQLKTLPKEIEYLQKLRELDSTNNPLTTLP 171

Query: 96  QAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYL 154
           + I     L  LI  NN LT  +LPK++  LKNL+V  L  + L   P  I  +  L+ L
Sbjct: 172 KEIGYLKNLEELILSNNELT--TLPKEIGKLKNLQVLYLGADLLTTLPNDIGYLKNLQKL 229

Query: 155 YLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASI 214
           YL    L  +P +I  L  L  L L  N L  +P+  G L  L+ L LS NQL +LP   
Sbjct: 230 YLNTGRLTTLPNDIGYLKNLQELYLSDNQLKTLPNDIGKLKNLQVLHLSGNQLTTLPKEF 289

Query: 215 SNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
             L+ L+ L L  N+L TLP E   L+ L E    L L  N+L TLP EI  L+ L EL+
Sbjct: 290 GKLQSLRELNLSGNQLTTLPKEFGKLQSLRE----LNLSGNQLTTLPKEIGKLQSLRELN 345

Query: 275 LRDNPLV 281
           L  N L 
Sbjct: 346 LSGNQLT 352



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/175 (44%), Positives = 101/175 (57%), Gaps = 5/175 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           E+LPK++  L+NL    LS NQL+  P +I  +  L+ L L NN L  +P EI +L KL 
Sbjct: 53  ETLPKEIGELQNLTKLYLSNNQLQALPKEIGKLKKLQVLTLNNNQLTTIPNEIGELKKLQ 112

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           VL L  N L  +P   G L +L+ L L+DNQL++LP  I  L+ L+ L   NN L TLP 
Sbjct: 113 VLYLDNNQLQALPKEIGKLKKLQVLYLNDNQLKTLPKEIEYLQKLRELDSTNNPLTTLPK 172

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTY 290
           EI  LK L E    L+L NN+L TLP EI  LK L  L L  + L+    +D+ Y
Sbjct: 173 EIGYLKNLEE----LILSNNELTTLPKEIGKLKNLQVLYLGAD-LLTTLPNDIGY 222



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/229 (36%), Positives = 124/229 (54%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K + +  L L +N L+  P+   +   L+ L L NN++  LP+ I     L  L   +N 
Sbjct: 84  KLKKLQVLTLNNNQLTTIPNEIGELKKLQVLYLDNNQLQALPKEIGKLKKLQVLYLNDNQ 143

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L  ++LPK++  L+ L+  + + N L   P +I  +  L+ L L NN L  +P+EI KL 
Sbjct: 144 L--KTLPKEIEYLQKLRELDSTNNPLTTLPKEIGYLKNLEELILSNNELTTLPKEIGKLK 201

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L VL LG + LT +P+  G L  L+ L L+  +L +LP  I  LK L+ L L +N+L+T
Sbjct: 202 NLQVLYLGADLLTTLPNDIGYLKNLQKLYLNTGRLTTLPNDIGYLKNLQELYLSDNQLKT 261

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP +I  LK     L+ L L  N+L TLP E   L+ L EL+L  N L 
Sbjct: 262 LPNDIGKLK----NLQVLHLSGNQLTTLPKEFGKLQSLRELNLSGNQLT 306



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 103/199 (51%), Gaps = 12/199 (6%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L  + L+  P++     NL+ L L+  R+T LP  I     L  L   +N 
Sbjct: 199 KLKNLQVLYLGADLLTTLPNDIGYLKNLQKLYLNTGRLTTLPNDIGYLKNLQELYLSDNQ 258

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L  ++LP D+  LKNL+V +LSGNQL   P +   + +L+ L L  N L  +P+E  KL 
Sbjct: 259 L--KTLPNDIGKLKNLQVLHLSGNQLTTLPKEFGKLQSLRELNLSGNQLTTLPKEFGKLQ 316

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L+L GN LT +P   G L  L  L LS NQL +LP  I +LK L+ L L       
Sbjct: 317 SLRELNLSGNQLTTLPKEIGKLQSLRELNLSGNQLTTLPKEIGHLKNLQELYLD------ 370

Query: 233 LPTEIITLKCLSEKLKSLL 251
              +I   +   EK++ LL
Sbjct: 371 ---DIPAWRSQEEKIRKLL 386


>gi|421114928|ref|ZP_15575342.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410013649|gb|EKO71726.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 234

 Score =  121 bits (303), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 84/203 (41%), Positives = 114/203 (56%), Gaps = 28/203 (13%)

Query: 79  TNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           T++++LDLSNN++                         +LPK++  LK L+  +LS NQL
Sbjct: 37  TDVQTLDLSNNQLI------------------------TLPKEIGQLKGLEWLSLSKNQL 72

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
           +  P +I  +  L+YLYL +N L  +P+EI  L +L  L L  N LT +P   G L +L+
Sbjct: 73  KTLPKEIEQLQKLRYLYLSDNQLTTLPKEIGYLKELQELDLSRNQLTTLPKEIGQLKELQ 132

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L LS+NQL +LP  I  LK L+ L L NN+L TLP  I  LK    KL+ L L  N+L 
Sbjct: 133 VLDLSNNQLTTLPNEIEFLKRLQELYLRNNQLTTLPKGIGYLK----KLQKLDLSRNQLT 188

Query: 259 TLPTEIITLKCLSELSLRDNPLV 281
           TLP EI TLK L EL L D P++
Sbjct: 189 TLPKEIETLKKLEELFLDDIPVL 211



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 88/171 (51%), Gaps = 10/171 (5%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLL 113
           + ++ L L  N L   P    +   LR L LS+N++T LP+ I     L  L ++RN L 
Sbjct: 60  KGLEWLSLSKNQLKTLPKEIEQLQKLRYLYLSDNQLTTLPKEIGYLKELQELDLSRNQLT 119

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++  LK L+V +LS NQL   P +I  +  L+ LYL NN L  +P+ I  L K
Sbjct: 120 T---LPKEIGQLKELQVLDLSNNQLTTLPNEIEFLKRLQELYLRNNQLTTLPKGIGYLKK 176

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLL 224
           L  L L  N LT +P     L +LE L L D     +P   S  K ++ LL
Sbjct: 177 LQKLDLSRNQLTTLPKEIETLKKLEELFLDD-----IPVLKSQEKKIQKLL 222



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 44/119 (36%), Positives = 62/119 (52%), Gaps = 7/119 (5%)

Query: 42  QIELLPNN-DYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN 100
           Q+  LP    Y K+ + +D   L  N L+  P    +   L+ LDLSNN++T LP  I  
Sbjct: 94  QLTTLPKEIGYLKELQELD---LSRNQLTTLPKEIGQLKELQVLDLSNNQLTTLPNEIEF 150

Query: 101 FP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
              L  L  RNN LT  +LPK +  LK L+  +LS NQL   P +I  +  L+ L+L +
Sbjct: 151 LKRLQELYLRNNQLT--TLPKGIGYLKKLQKLDLSRNQLTTLPKEIETLKKLEELFLDD 207


>gi|417785891|ref|ZP_12433591.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409950926|gb|EKO05445.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 267

 Score =  121 bits (303), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 91/250 (36%), Positives = 125/250 (50%), Gaps = 7/250 (2%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           L   P     F NL  L+L  N++T LP+ I     L  L    N  T  SLPK++  L+
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFT--SLPKEIGQLQ 63

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL+  +L GNQ    P +I  +  L+ L L  N    +P+EI +L  L  L L GN  T 
Sbjct: 64  NLERLDLDGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTS 123

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P   G L +LEAL L  N+    P  I   + LK L L  ++L+TLP EI+ L    + 
Sbjct: 124 LPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLL----QN 179

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVH 306
           L+SL L  N+L +LP EI  L+ L EL+L+DN L          +   +L L S +  + 
Sbjct: 180 LQSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLK 239

Query: 307 EIDYSQEHLP 316
           E    QE LP
Sbjct: 240 EKQKIQELLP 249



 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 87/229 (37%), Positives = 122/229 (53%), Gaps = 7/229 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N L+  P    +  NLR L+L+ N+ T LP+ I     L  L    N  T
Sbjct: 17  QNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFT 76

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLPK++  L+ L+V NL+GNQ    P +I  +  L+ L L  N    +P+EI +L KL
Sbjct: 77  --SLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKL 134

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N  T  P        L+ L LS +QL++LP  I  L+ L+SL L  N+L +LP
Sbjct: 135 EALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSLP 194

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
            EI  L+ L E    L L +NKL+TLP EI  L+ L  L L  N   ++
Sbjct: 195 KEIGQLQNLFE----LNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLK 239



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 63/123 (51%), Gaps = 4/123 (3%)

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           +G + L  +PR I     L  L+L GN LT +P   G L  L  L L+ NQ  SLP  I 
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            L+ L+ L L  N+  +LP EI  L    +KL+ L L  N+  +LP EI  L+ L  L L
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEIGQL----QKLRVLNLAGNQFTSLPKEIGQLQNLERLDL 116

Query: 276 RDN 278
             N
Sbjct: 117 AGN 119


>gi|298244934|ref|ZP_06968740.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297552415|gb|EFH86280.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 353

 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 84/222 (37%), Positives = 122/222 (54%), Gaps = 7/222 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAE 116
           +  L L +N L   P+  S+ ++L+ LDL NN++  LP+ + N   L  L   NN L+  
Sbjct: 75  LKNLYLTNNQLRTLPEQVSRLSSLQWLDLENNQLNSLPEQVRNLRDLQVLDLANNQLS-- 132

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           SLP ++ NL +L    L  NQL   P Q+ ++  L++L+L NN LN +P +I+ L  L  
Sbjct: 133 SLPGEIGNLSSLDSLYLGDNQLSTLPEQMENLRNLQFLHLSNNQLNTLPAKIDNLASLQS 192

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+L  N  + +P    +L  L+ L L +NQL SLPA I NL  L SL L N+   +LP +
Sbjct: 193 LALDNNQFSSLPGQVWNLRNLQFLALGNNQLNSLPAEIGNLSELSSLHLRNSHFSSLPRQ 252

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           +  L     KL+ L L  N+L +LP EI  L  L  L L +N
Sbjct: 253 VWNLS----KLRHLGLTLNQLSSLPAEIGNLSELQWLDLSNN 290



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/215 (37%), Positives = 122/215 (56%), Gaps = 7/215 (3%)

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNL 125
           NL+  P    +F++L++L L+NN++  LP+ ++    L  L   NN L   SLP+ + NL
Sbjct: 61  NLTQIPSEVWQFSSLKNLYLTNNQLRTLPEQVSRLSSLQWLDLENNQLN--SLPEQVRNL 118

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           ++L+V +L+ NQL   P +I ++ +L  LYLG+N L+ +P ++  L  L  L L  N L 
Sbjct: 119 RDLQVLDLANNQLSSLPGEIGNLSSLDSLYLGDNQLSTLPEQMENLRNLQFLHLSNNQLN 178

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
            +P    +L  L++L L +NQ  SLP  + NL+ L+ L L NN+L +LP EI  L  LS 
Sbjct: 179 TLPAKIDNLASLQSLALDNNQFSSLPGQVWNLRNLQFLALGNNQLNSLPAEIGNLSELS- 237

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
              SL L N+   +LP ++  L  L  L L  N L
Sbjct: 238 ---SLHLRNSHFSSLPRQVWNLSKLRHLGLTLNQL 269



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/210 (39%), Positives = 116/210 (55%), Gaps = 7/210 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           +D+L L  N LS  P+      NL+ L LSNN++  LP  I N   L +L   NN  +  
Sbjct: 144 LDSLYLGDNQLSTLPEQMENLRNLQFLHLSNNQLNTLPAKIDNLASLQSLALDNNQFS-- 201

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           SLP  + NL+NL+   L  NQL   P +I ++  L  L+L N+  + +PR++  L KL  
Sbjct: 202 SLPGQVWNLRNLQFLALGNNQLNSLPAEIGNLSELSSLHLRNSHFSSLPRQVWNLSKLRH 261

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L+ +P   G+L +L+ L LS+NQ  SLPA ISNL  L+ L L NN+  +LP E
Sbjct: 262 LGLTLNQLSSLPAEIGNLSELQWLDLSNNQFSSLPAEISNLSSLRWLNLSNNQFSSLPKE 321

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIIT 266
           I  L      L+ L L +N  +TL  E+I 
Sbjct: 322 ISNLSS----LQWLNLGDNLSQTLEAELIA 347



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 69/127 (54%), Gaps = 4/127 (3%)

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           L+L   +L  +P E+ +   L  L L  N L  +P+    L  L+ L L +NQL SLP  
Sbjct: 55  LHLCECNLTQIPSEVWQFSSLKNLYLTNNQLRTLPEQVSRLSSLQWLDLENNQLNSLPEQ 114

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           + NL+ L+ L L NN+L +LP EI  L      L SL L +N+L TLP ++  L+ L  L
Sbjct: 115 VRNLRDLQVLDLANNQLSSLPGEIGNLSS----LDSLYLGDNQLSTLPEQMENLRNLQFL 170

Query: 274 SLRDNPL 280
            L +N L
Sbjct: 171 HLSNNQL 177


>gi|418678095|ref|ZP_13239369.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|418684289|ref|ZP_13245475.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|418741009|ref|ZP_13297385.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|400321285|gb|EJO69145.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|410741181|gb|EKQ85893.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410751604|gb|EKR08581.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 354

 Score =  120 bits (302), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 127/223 (56%), Gaps = 7/223 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L   NL+ FP    +F NL+ LDLS N +T L + I     L  L   +N LT 
Sbjct: 42  NVRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQELSLHSNKLT- 100

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LPK++  LK+LK  +L  NQL   P +++ + TL+ L L  N LN VP+EI +L  L 
Sbjct: 101 -NLPKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQ 159

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L L  N +  +P     L +L+ LIL +N+ +++P     LK L+ L L  N+L ++P 
Sbjct: 160 ILKLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLVSIPK 219

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           EI+ L    + L+ L+L  N++  LPTE++ L+ L EL L +N
Sbjct: 220 EILQL----QNLRDLVLDRNQITILPTEVLQLQNLQELYLSEN 258



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/218 (38%), Positives = 110/218 (50%), Gaps = 7/218 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L+ N L   P        L  L+LS NR+  +P+ I     L  L   +N +   SLPK+
Sbjct: 117 LFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQILKLDHNQIV--SLPKE 174

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L+ LK   L  N+ +  P + L +  L+ L L  N L  +P+EI +L  L  L L  
Sbjct: 175 IEGLQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLVSIPKEILQLQNLRDLVLDR 234

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N +T +P     L  L+ L LS+NQ  SLP  I  LK L+ L L NN+L TLP EI  LK
Sbjct: 235 NQITILPTEVLQLQNLQELYLSENQFTSLPKEIDKLKNLRWLSLKNNRLTTLPKEIGQLK 294

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
                L+ L L NN+L  LP EI  LK L  L L  NP
Sbjct: 295 ----NLQRLELGNNQLTNLPKEIGQLKNLQRLELDSNP 328



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 94/185 (50%), Gaps = 19/185 (10%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++L K + N  N++V +LS   L  FP +I     L+ L L  N L  + +EI +L  L 
Sbjct: 31  KNLTKALQNSSNVRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQ 90

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            LSL  N LT++P     L  L+ L L  NQL ++P  +  L+ L+ L L  N+L  +P 
Sbjct: 91  ELSLHSNKLTNLPKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPK 150

Query: 236 EIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           EI  LK L                    ++LK L+L NN+ + +P E + LK L +L+L 
Sbjct: 151 EIGQLKNLQILKLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEALQLKNLQKLNLS 210

Query: 277 DNPLV 281
           +N LV
Sbjct: 211 ENQLV 215



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 5/120 (4%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L+L  N ++  P    +  NL+ L LS N+ T LP+ I     L  L  +NN LT
Sbjct: 225 QNLRDLVLDRNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDKLKNLRWLSLKNNRLT 284

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  LKNL+   L  NQL   P +I  +  L+ L L +N  +  P+E  K+ KL
Sbjct: 285 --TLPKEIGQLKNLQRLELGNNQLTNLPKEIGQLKNLQRLELDSNPFS--PKEKEKVVKL 340


>gi|340367867|ref|XP_003382474.1| PREDICTED: leucine-rich repeat-containing protein 1-like
           [Amphimedon queenslandica]
          Length = 470

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 100/331 (30%), Positives = 156/331 (47%), Gaps = 40/331 (12%)

Query: 46  LPNNDYNKKPENIDTL------LLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN  +  PE+I +L       L +N+L+  P +    + LR LDL NN +T LP  I 
Sbjct: 154 LSNNRLSFVPEDIGSLSGLEELFLQYNHLAMIPSSICHLSFLRELDLKNNNLTSLPNEIG 213

Query: 100 NFPL-STLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
           +  L + L   NN ++  SLP  +  L+NL+   L  N+L   P +I  +  LK LY G+
Sbjct: 214 SLSLLNILCVTNNRIS--SLPSSIGKLRNLEELTLHSNELAHLPSEICLLKDLKLLYCGD 271

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P +  KL KL  L   G  L  +P++F +   L  + L +N+L  LP  I NL 
Sbjct: 272 NKLQSLPDQFGKLVKLEELDFSGCELVKLPESFSNCKSLIRVWLCNNRLVQLPVQIGNLV 331

Query: 219 MLKSLLLHNNKLRTLPTEI--ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
            LK L +  NK+R  P  +  +TL   + +   ++  N +++                L 
Sbjct: 332 NLKELHVRKNKIRMFPMSMRSLTLYTFTAQENPIIKENQRVK----------------LS 375

Query: 277 DNPLVIRFVSDMTYKPPSLLELASRTLKVHEID--YSQEHLPQNLVQYLESAHHCVNPKC 334
           D+P         T   PSLLEL++R +   +I+   ++  +P +L   L  +H+     C
Sbjct: 376 DSP---------TDSFPSLLELSARAIIRTQINEWKNEGAVPTHLADML--SHYDTCSTC 424

Query: 335 KGVFFDNRIEHIKFVDFCGKYRIPLLQYLCS 365
              FF     H+ F      Y++PL +Y CS
Sbjct: 425 GRPFFKFFSYHVAFHLVGVYYKLPLYEYCCS 455


>gi|395850250|ref|XP_003797708.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Otolemur garnettii]
          Length = 1052

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 90/269 (33%), Positives = 141/269 (52%), Gaps = 20/269 (7%)

Query: 27  LDFSY---SSLDSETLATQIEL----LPNNDYNKKPENIDTLL------LYHNNLSFFPD 73
           LD S+   ++L SE ++   EL    L +N     P  + TL       +  N L+  PD
Sbjct: 116 LDVSHNRLTTLGSEVVSALRELRKLNLSHNQLPALPTQLGTLAQLEELDVSFNRLAHLPD 175

Query: 74  NASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFN 132
           + S  + LR+LD+ +N++T  P+ +     L  L   +N L  + LP+D+S L+ LK+  
Sbjct: 176 SFSCLSRLRTLDVDHNQLTAFPRQLLQLASLEELDVSSNRL--QGLPEDISALRALKILW 233

Query: 133 LSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFG 192
           LSG +L   P    ++ +L+ L L NN L  +P + ++L +L +L+L  N L + P    
Sbjct: 234 LSGAELGTLPAGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLLEEFPAALL 293

Query: 193 DLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLL 252
            L  LE L LS NQL S+P+ I+ L  L +L L NN++R LP  I+ L  L E    L+L
Sbjct: 294 PLAGLEELYLSRNQLTSVPSLIAGLSRLLTLWLDNNRIRYLPDSIVELTGLEE----LVL 349

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             N++  LP     L  +    ++DNPL+
Sbjct: 350 QGNQIAVLPDNFGQLSRVGLWKIKDNPLI 378



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 82/226 (36%), Positives = 113/226 (50%), Gaps = 10/226 (4%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTL-IARNNL 112
           +I+ L L +N L   PD   S   +LR L L  NR   LP A+      L+ L ++ N L
Sbjct: 64  DIEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 123

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
            T  S  + +S L+ L+  NLS NQL   P Q+  +  L+ L +  N L H+P   + L 
Sbjct: 124 TTLGS--EVVSALRELRKLNLSHNQLPALPTQLGTLAQLEELDVSFNRLAHLPDSFSCLS 181

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           +L  L +  N LT  P     L  LE L +S N+L+ LP  IS L+ LK L L   +L T
Sbjct: 182 RLRTLDVDHNQLTAFPRQLLQLASLEELDVSSNRLQGLPEDISALRALKILWLSGAELGT 241

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           LP       C    L+SL+L NN L+ LP +   L+ L  L+L  N
Sbjct: 242 LPAGF----CELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSN 283



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 97/205 (47%), Gaps = 26/205 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF--------------- 101
            + TL + HN L+ FP    +  +L  LD+S+NR+  LP+ I+                 
Sbjct: 182 RLRTLDVDHNQLTAFPRQLLQLASLEELDVSSNRLQGLPEDISALRALKILWLSGAELGT 241

Query: 102 ---------PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                     L +L+  NN L A  LP   S L+ LK+ NLS N LE+FP  +L +  L+
Sbjct: 242 LPAGFCELASLESLMLDNNGLQA--LPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLE 299

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYL  N L  VP  I  L +L  L L  N +  +PD+  +L  LE L+L  NQ+  LP 
Sbjct: 300 ELYLSRNQLTSVPSLIAGLSRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPD 359

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEI 237
           +   L  +    + +N L   P E+
Sbjct: 360 NFGQLSRVGLWKIKDNPLIQPPYEV 384



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 63/110 (57%), Gaps = 5/110 (4%)

Query: 174 LHVLSLGGNSLTDIPDTFGD-LYQLEALILSDNQLESLPASISNLK-MLKSLLLHNNKLR 231
           + VL+LG N L ++PD  G  L  L  L+L  N+   LP +++ L   L  L + +N+L 
Sbjct: 65  IEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 124

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           TL +E+++   L E L+ L L +N+L  LPT++ TL  L EL +  N L 
Sbjct: 125 TLGSEVVS--ALRE-LRKLNLSHNQLPALPTQLGTLAQLEELDVSFNRLA 171


>gi|421132147|ref|ZP_15592319.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410356394|gb|EKP03731.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 354

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 127/223 (56%), Gaps = 7/223 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L   NL+ FP    +F NL+ LDLS N +T L + I     L  L   +N LT 
Sbjct: 42  NVRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQELSLHSNKLT- 100

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LPK++  LK+LK  +L  NQL   P +++ + TL+ L L  N LN VP+EI +L  L 
Sbjct: 101 -NLPKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQ 159

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L L  N +  +P     L +L+ LIL +N+ +++P     LK L+ L L  N+L ++P 
Sbjct: 160 ILKLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLISIPK 219

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           EI+ L    + L+ L+L  N++  LPTE++ L+ L EL L +N
Sbjct: 220 EILQL----QNLRDLVLDRNQITILPTEVLQLQNLQELYLSEN 258



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/218 (38%), Positives = 110/218 (50%), Gaps = 7/218 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L+ N L   P        L  L+LS NR+  +P+ I     L  L   +N +   SLPK+
Sbjct: 117 LFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQILKLDHNQIV--SLPKE 174

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L+ LK   L  N+ +  P + L +  L+ L L  N L  +P+EI +L  L  L L  
Sbjct: 175 IEGLQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLISIPKEILQLQNLRDLVLDR 234

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N +T +P     L  L+ L LS+NQ  SLP  I  LK L+ L L NN+L TLP EI  LK
Sbjct: 235 NQITILPTEVLQLQNLQELYLSENQFTSLPKEIDKLKNLRWLSLKNNRLTTLPKEIGQLK 294

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
                L+ L L NN+L  LP EI  LK L  L L  NP
Sbjct: 295 ----NLQRLELGNNQLTNLPKEIGQLKNLQRLELDSNP 328



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/185 (33%), Positives = 94/185 (50%), Gaps = 19/185 (10%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++L K + N  N++V +LS   L  FP +I     L+ L L  N L  + +EI +L  L 
Sbjct: 31  KNLTKALQNSSNVRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQ 90

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            LSL  N LT++P     L  L+ L L  NQL ++P  +  L+ L+ L L  N+L  +P 
Sbjct: 91  ELSLHSNKLTNLPKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPK 150

Query: 236 EIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           EI  LK L                    ++LK L+L NN+ + +P E + LK L +L+L 
Sbjct: 151 EIGQLKNLQILKLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEALQLKNLQKLNLS 210

Query: 277 DNPLV 281
           +N L+
Sbjct: 211 ENQLI 215



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/120 (35%), Positives = 64/120 (53%), Gaps = 5/120 (4%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L+L  N ++  P    +  NL+ L LS N+ T LP+ I     L  L  +NN LT
Sbjct: 225 QNLRDLVLDRNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDKLKNLRWLSLKNNRLT 284

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  LKNL+   L  NQL   P +I  +  L+ L L +N  +  P+E  K+ KL
Sbjct: 285 --TLPKEIGQLKNLQRLELGNNQLTNLPKEIGQLKNLQRLELDSNPFS--PKEKEKVVKL 340


>gi|410939257|ref|ZP_11371091.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410785676|gb|EKR74633.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 288

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 85/214 (39%), Positives = 115/214 (53%), Gaps = 5/214 (2%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSN 124
            N L   P       NL+ L L+ N IT LP  I N     +++ N +   E++PK++ N
Sbjct: 59  ENPLKTLPKEIGNLKNLKELSLNTNEITTLPSEIGNLKNLQVLSLN-VNRLETIPKEIGN 117

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           LKNLK  ++  N+L+  P +I ++  LK LYL  N L  +P+EI  L KL  + L  N L
Sbjct: 118 LKNLKELSIEWNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQRIHLSTNEL 177

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T +P    +L  L  + L DNQ  +LP  I NLK L +L+L  N+L +LP EI  LK L 
Sbjct: 178 TKLPQEIKNLEGLIEIYLHDNQFTTLPKEIGNLKNLHNLVLGRNQLISLPPEIGNLKNLK 237

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           E    L L  N+L  LP +I  LK L  LSL  N
Sbjct: 238 E----LYLEENQLTKLPKQIADLKQLERLSLEGN 267



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 69/166 (41%), Positives = 96/166 (57%), Gaps = 4/166 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++LPK++ NLKNLK  +L+ N++   P +I ++  L+ L L  N L  +P+EI  L  L 
Sbjct: 63  KTLPKEIGNLKNLKELSLNTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKEIGNLKNLK 122

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            LS+  N L  +P   G+L  L+ L LS NQL+ LP  I NLK L+ + L  N+L  LP 
Sbjct: 123 ELSIEWNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQRIHLSTNELTKLPQ 182

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           EI  L+ L E    + LH+N+  TLP EI  LK L  L L  N L+
Sbjct: 183 EIKNLEGLIE----IYLHDNQFTTLPKEIGNLKNLHNLVLGRNQLI 224



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/202 (39%), Positives = 111/202 (54%), Gaps = 7/202 (3%)

Query: 81  LRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
           L+  D   N +  LP+ I N   L  L    N +T  +LP ++ NLKNL+V +L+ N+LE
Sbjct: 52  LKYRDNEENPLKTLPKEIGNLKNLKELSLNTNEIT--TLPSEIGNLKNLQVLSLNVNRLE 109

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
             P +I ++  LK L +  N L  +P+EI  L  L  L L  N L  +P    +L +L+ 
Sbjct: 110 TIPKEIGNLKNLKELSIEWNKLKTLPKEIGNLKNLKELYLSRNQLKVLPQEIWNLKKLQR 169

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRT 259
           + LS N+L  LP  I NL+ L  + LH+N+  TLP EI  LK L     +L+L  N+L +
Sbjct: 170 IHLSTNELTKLPQEIKNLEGLIEIYLHDNQFTTLPKEIGNLKNLH----NLVLGRNQLIS 225

Query: 260 LPTEIITLKCLSELSLRDNPLV 281
           LP EI  LK L EL L +N L 
Sbjct: 226 LPPEIGNLKNLKELYLEENQLT 247



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 99/185 (53%), Gaps = 5/185 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLL 113
           +N+  L L  N L   P       NL+ L +  N++  LP+ I N   L  L ++RN L 
Sbjct: 96  KNLQVLSLNVNRLETIPKEIGNLKNLKELSIEWNKLKTLPKEIGNLKNLKELYLSRNQL- 154

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
             + LP+++ NLK L+  +LS N+L + P +I ++  L  +YL +N    +P+EI  L  
Sbjct: 155 --KVLPQEIWNLKKLQRIHLSTNELTKLPQEIKNLEGLIEIYLHDNQFTTLPKEIGNLKN 212

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           LH L LG N L  +P   G+L  L+ L L +NQL  LP  I++LK L+ L L  N+  + 
Sbjct: 213 LHNLVLGRNQLISLPPEIGNLKNLKELYLEENQLTKLPKQIADLKQLERLSLEGNQFPSE 272

Query: 234 PTEII 238
             E I
Sbjct: 273 EKERI 277



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 45/101 (44%), Positives = 60/101 (59%), Gaps = 4/101 (3%)

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P   G+L  L+ L L+ N++ +LP+ I NLK L+ L L+ N+L T+P EI  LK
Sbjct: 60  NPLKTLPKEIGNLKNLKELSLNTNEITTLPSEIGNLKNLQVLSLNVNRLETIPKEIGNLK 119

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            L E    L +  NKL+TLP EI  LK L EL L  N L +
Sbjct: 120 NLKE----LSIEWNKLKTLPKEIGNLKNLKELYLSRNQLKV 156



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 43/122 (35%), Positives = 61/122 (50%), Gaps = 7/122 (5%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           Q+++LP   +N K   +  + L  N L+  P        L  + L +N+ T LP+ I N 
Sbjct: 153 QLKVLPQEIWNLK--KLQRIHLSTNELTKLPQEIKNLEGLIEIYLHDNQFTTLPKEIGNL 210

Query: 102 P-LSTLI-ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
             L  L+  RN L+   SLP ++ NLKNLK   L  NQL + P QI D+  L+ L L  N
Sbjct: 211 KNLHNLVLGRNQLI---SLPPEIGNLKNLKELYLEENQLTKLPKQIADLKQLERLSLEGN 267

Query: 160 SL 161
             
Sbjct: 268 QF 269


>gi|418712114|ref|ZP_13272859.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410791381|gb|EKR85057.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 379

 Score =  120 bits (302), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 98/243 (40%), Positives = 127/243 (52%), Gaps = 13/243 (5%)

Query: 46  LPNNDYNKKP------ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN +   P      +N+  L L++N L   P    +  NL++L LS NR+T  PQ I 
Sbjct: 78  LANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTFPQEIG 137

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L  L    N LT  +L +++  LKNL+  NL  NQL     +I  +  L+ L L  
Sbjct: 138 QLKNLQKLNLDYNQLT--TLLQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDK 195

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P EI +L  L  L L  N LT +P+  G L  L+ALIL DNQL  LP  I  L+
Sbjct: 196 NRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQ 255

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            LK L   NN+L  LP EI  L    +KL+ L L +N+L TLP EI  L+ L EL L DN
Sbjct: 256 NLKLLYSVNNELTILPQEIGQL----QKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDN 311

Query: 279 PLV 281
            L 
Sbjct: 312 QLT 314



 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 100/287 (34%), Positives = 147/287 (51%), Gaps = 26/287 (9%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL+L  N L+ FP    +  NL+ L+L  N++T L Q I     L  L    N LT
Sbjct: 117 QNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDYNQLT 176

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +L +++  LKNL+  NL  N+L+  P +I  +  L+ LYL NN L  +P EI +L  L
Sbjct: 177 --TLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNL 234

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L LG N LT +P   G L  L+ L   +N+L  LP  I  L+ L+ L L +N+L TLP
Sbjct: 235 QALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLP 294

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPS 294
            EI  L    E L+ L L++N+L TLP EI  LK L           I F + +T  P  
Sbjct: 295 KEIGQL----ENLQELYLNDNQLTTLPKEIGQLKNLQTF--------ISFNNQLTMLPQE 342

Query: 295 LLELAS-RTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFD 340
           + +L + + LK++    S +          E     + PKC+ ++F+
Sbjct: 343 IGQLQNLQWLKLNNNQLSSQE---------EERIQKLLPKCQ-IYFE 379



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 69/166 (41%), Positives = 92/166 (55%), Gaps = 4/166 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++  L+NLK  +L+ NQ +  P +I  +  L+ L L NN L ++P+EI +L  L  
Sbjct: 62  TLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQT 121

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N LT  P   G L  L+ L L  NQL +L   I  LK L+ L L  N+L TL  E
Sbjct: 122 LILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDYNQLTTLLQE 181

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           I  LK     L+ L L  N+L+ LP EI  L+ L EL L +N L I
Sbjct: 182 IGQLK----NLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTI 223



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 14/141 (9%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+     +   +  L LS  +L +LP  I  L+ LKSL L NN+ +
Sbjct: 25  CEIQAEKIKPGTYRDLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFK 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYK 291
           TLP EI  L+ L E    L L NN+L+ LP EI  L+ L  L L         V+ +T  
Sbjct: 85  TLPKEIGQLQNLQE----LNLWNNQLKNLPKEIGQLQNLQTLILS--------VNRLTTF 132

Query: 292 PPSLLELASRTLKVHEIDYSQ 312
           P  + +L  + L+   +DY+Q
Sbjct: 133 PQEIGQL--KNLQKLNLDYNQ 151


>gi|398341320|ref|ZP_10526023.1| cytoplasmic membrane protein [Leptospira kirschneri serovar Bim
           str. 1051]
          Length = 353

 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 127/223 (56%), Gaps = 7/223 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L   NL+ FP    +F NL+ LDLS N +T L + I     L  L   +N LT 
Sbjct: 42  NVRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQELSLHSNKLT- 100

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LPK++  LK+LK  +L  NQL   P +++ + TL+ L L  N LN VP+EI +L  L 
Sbjct: 101 -NLPKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQ 159

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L L  N +  +P     L +L+ LIL +N+ +++P     LK L+ L L  N+L ++P 
Sbjct: 160 ILKLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLVSIPK 219

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           EI+ L    + L+ L+L  N++  LPTE++ L+ L EL L +N
Sbjct: 220 EILQL----QNLRDLVLDRNQITILPTEVLQLQNLQELYLSEN 258



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/219 (38%), Positives = 111/219 (50%), Gaps = 7/219 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L+ N L   P        L  L+LS NR+  +P+ I     L  L   +N +   SLPK+
Sbjct: 117 LFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPKEIGQLKNLQILKLDHNQIV--SLPKE 174

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L+ LK   L  N+ +  P + L +  L+ L L  N L  +P+EI +L  L  L L  
Sbjct: 175 IEGLQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLVSIPKEILQLQNLRDLVLDR 234

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N +T +P     L  L+ L LS+NQ  SLP  I  LK L+ L L NN+L TLP EI  LK
Sbjct: 235 NQITILPTEVLQLQNLQELYLSENQFTSLPKEIDKLKNLRWLSLKNNRLTTLPKEIGQLK 294

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
                L+ L L NN+L  LP EI  LK L  L L  NPL
Sbjct: 295 ----NLQRLELGNNQLTNLPKEIGQLKNLQRLELDSNPL 329



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 95/185 (51%), Gaps = 3/185 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLP-QAITNFPLSTLIARNNLLT 114
           +N+  L L HN +   P        L+ L L NNR  ++P +A+    L  L    N L 
Sbjct: 156 KNLQILKLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEALQLKNLQKLNLSENQLV 215

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             S+PK++  L+NL+   L  NQ+   P ++L +  L+ LYL  N    +P+EI+KL  L
Sbjct: 216 --SIPKEILQLQNLRDLVLDRNQITILPTEVLQLQNLQELYLSENQFTSLPKEIDKLKNL 273

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             LSL  N LT +P   G L  L+ L L +NQL +LP  I  LK L+ L L +N L +  
Sbjct: 274 RWLSLKNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKEIGQLKNLQRLELDSNPLSSKE 333

Query: 235 TEIIT 239
            E + 
Sbjct: 334 KEKVV 338



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 94/185 (50%), Gaps = 19/185 (10%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++L K + N  N++V +LS   L  FP +I     L+ L L  N L  + +EI +L  L 
Sbjct: 31  KNLTKALQNSSNVRVLDLSFQNLTSFPKEIGQFKNLQKLDLSGNELTVLSKEIVQLQNLQ 90

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            LSL  N LT++P     L  L+ L L  NQL ++P  +  L+ L+ L L  N+L  +P 
Sbjct: 91  ELSLHSNKLTNLPKEIEQLKSLKNLDLFRNQLMTVPKEVMLLQTLEKLNLSLNRLNAVPK 150

Query: 236 EIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           EI  LK L                    ++LK L+L NN+ + +P E + LK L +L+L 
Sbjct: 151 EIGQLKNLQILKLDHNQIVSLPKEIEGLQELKELILENNRFKNVPGEALQLKNLQKLNLS 210

Query: 277 DNPLV 281
           +N LV
Sbjct: 211 ENQLV 215


>gi|410451738|ref|ZP_11305740.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014504|gb|EKO76634.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 438

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/227 (38%), Positives = 123/227 (54%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +++  L L  N L+  P       NL+ LDL  N++T +P+ I     L  L    N L 
Sbjct: 176 QHLQRLFLNFNQLTTVPQEIGNLQNLQRLDLDKNQLTTIPKEIGQLQSLQGLTLSFNQL- 234

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             ++PK++  L+NL+   L+ N L   P +I ++  LK LYL +N L  +P+EI  L  L
Sbjct: 235 -RTIPKEIGKLQNLQGLTLTSNGLATIPKEIGNLQNLKVLYLDHNKLATIPQEIGNLQSL 293

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL+L  N L  +P   G L  L+ L L+ N L +LP  I NL+ LK L L +N+L TLP
Sbjct: 294 QVLTLDRNLLAPLPKEIGKLQNLQRLALTVNALTTLPKEIGNLQNLKELNLTSNRLTTLP 353

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L+ L E    L L  N+L+TLP EI  L+ L  L+L  NPL 
Sbjct: 354 KEIGKLQNLQE----LHLDYNQLKTLPKEIGKLQSLEYLNLNGNPLT 396



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/251 (35%), Positives = 125/251 (49%), Gaps = 31/251 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-----------LS 104
           +N+  L L+ N L+  P    +  +L+ LDL  N+IT LP  I               L+
Sbjct: 60  QNLQGLNLWDNQLTTMPKEIGELQHLQKLDLGFNKITVLPNEIGQLQSLLDLNLSFNQLT 119

Query: 105 TL--------------IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPT 150
           T+              +  N+ L A  LPK++  L+NL+  + S NQL   P +I ++  
Sbjct: 120 TIPKEIGELQHLQRLFLGFNHQLIA--LPKEIGKLQNLQEMDSSRNQLITLPKEIGELQH 177

Query: 151 LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           L+ L+L  N L  VP+EI  L  L  L L  N LT IP   G L  L+ L LS NQL ++
Sbjct: 178 LQRLFLNFNQLTTVPQEIGNLQNLQRLDLDKNQLTTIPKEIGQLQSLQGLTLSFNQLRTI 237

Query: 211 PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
           P  I  L+ L+ L L +N L T+P EI  L    + LK L L +NKL T+P EI  L+ L
Sbjct: 238 PKEIGKLQNLQGLTLTSNGLATIPKEIGNL----QNLKVLYLDHNKLATIPQEIGNLQSL 293

Query: 271 SELSLRDNPLV 281
             L+L  N L 
Sbjct: 294 QVLTLDRNLLA 304



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/190 (34%), Positives = 100/190 (52%), Gaps = 3/190 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +++  L L  N L   P    K  NL+ L L++N +  +P+ I N   L  L   +N L 
Sbjct: 222 QSLQGLTLSFNQLRTIPKEIGKLQNLQGLTLTSNGLATIPKEIGNLQNLKVLYLDHNKLA 281

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             ++P+++ NL++L+V  L  N L   P +I  +  L+ L L  N+L  +P+EI  L  L
Sbjct: 282 --TIPQEIGNLQSLQVLTLDRNLLAPLPKEIGKLQNLQRLALTVNALTTLPKEIGNLQNL 339

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N LT +P   G L  L+ L L  NQL++LP  I  L+ L+ L L+ N L + P
Sbjct: 340 KELNLTSNRLTTLPKEIGKLQNLQELHLDYNQLKTLPKEIGKLQSLEYLNLNGNPLTSFP 399

Query: 235 TEIITLKCLS 244
            EI  L+ L 
Sbjct: 400 EEIGKLQNLK 409



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 66/166 (39%), Positives = 92/166 (55%), Gaps = 5/166 (3%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++  L+NL+  NL  NQL   P +I ++  L+ L LG N +  +P EI +L  L  
Sbjct: 51  ALPKEIGQLQNLQGLNLWDNQLTTMPKEIGELQHLQKLDLGFNKITVLPNEIGQLQSLLD 110

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDN-QLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           L+L  N LT IP   G+L  L+ L L  N QL +LP  I  L+ L+ +    N+L TLP 
Sbjct: 111 LNLSFNQLTTIPKEIGELQHLQRLFLGFNHQLIALPKEIGKLQNLQEMDSSRNQLITLPK 170

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           EI  L    + L+ L L+ N+L T+P EI  L+ L  L L  N L 
Sbjct: 171 EIGEL----QHLQRLFLNFNQLTTVPQEIGNLQNLQRLDLDKNQLT 212



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 97/199 (48%), Gaps = 12/199 (6%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L  N L+  P       NL+ L L +N++  +PQ I N   L  L    NL
Sbjct: 243 KLQNLQGLTLTSNGLATIPKEIGNLQNLKVLYLDHNKLATIPQEIGNLQSLQVLTLDRNL 302

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L    LPK++  L+NL+   L+ N L   P +I ++  LK L L +N L  +P+EI KL 
Sbjct: 303 LAP--LPKEIGKLQNLQRLALTVNALTTLPKEIGNLQNLKELNLTSNRLTTLPKEIGKLQ 360

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N L  +P   G L  LE L L+ N L S P  I  L+ LK L L  N    
Sbjct: 361 NLQELHLDYNQLKTLPKEIGKLQSLEYLNLNGNPLTSFPEEIGKLQNLKVLSLVGNP--- 417

Query: 233 LPTEIITLKCLSEKLKSLL 251
                 +L+   EK++ LL
Sbjct: 418 ------SLRSQKEKIQKLL 430



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 71/134 (52%), Gaps = 4/134 (2%)

Query: 149 PT-LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQL 207
           PT ++ LYL    L  +P+EI +L  L  L+L  N LT +P   G+L  L+ L L  N++
Sbjct: 36  PTQVRVLYLNAKKLTALPKEIGQLQNLQGLNLWDNQLTTMPKEIGELQHLQKLDLGFNKI 95

Query: 208 ESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITL 267
             LP  I  L+ L  L L  N+L T+P EI  L+ L    +  L  N++L  LP EI  L
Sbjct: 96  TVLPNEIGQLQSLLDLNLSFNQLTTIPKEIGELQHLQ---RLFLGFNHQLIALPKEIGKL 152

Query: 268 KCLSELSLRDNPLV 281
           + L E+    N L+
Sbjct: 153 QNLQEMDSSRNQLI 166



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/117 (36%), Positives = 60/117 (51%), Gaps = 4/117 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
            ++ VL L    LT +P   G L  L+ L L DNQL ++P  I  L+ L+ L L  NK+ 
Sbjct: 37  TQVRVLYLNAKKLTALPKEIGQLQNLQGLNLWDNQLTTMPKEIGELQHLQKLDLGFNKIT 96

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDM 288
            LP EI  L+ L +    L L  N+L T+P EI  L+ L  L L  N  +I    ++
Sbjct: 97  VLPNEIGQLQSLLD----LNLSFNQLTTIPKEIGELQHLQRLFLGFNHQLIALPKEI 149


>gi|421130600|ref|ZP_15590794.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410358299|gb|EKP05480.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 258

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/201 (43%), Positives = 119/201 (59%), Gaps = 7/201 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           ++R+LDLS N++T LP+ I     L +L  RNN LT  +LPK++  LK L+V +L+ NQL
Sbjct: 38  DVRTLDLSKNQLTTLPKEIEYLKDLESLDLRNNQLT--TLPKEIEYLKKLQVLDLNDNQL 95

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
              P +I  +  L+ LYL NN L  +P+EI  L KL  L L  N LT +P   G L +L+
Sbjct: 96  TTIPKEIGYLKKLQELYLINNQLTTLPKEIGYLKKLQELYLINNQLTTLPKEIGYLKKLQ 155

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L L +NQL +LP  I  L+ L  L L  N+L TLP EI  L    +KL+ L L NN+  
Sbjct: 156 ELYLINNQLTTLPKEIGYLEELWLLDLRKNQLTTLPKEIGKL----QKLEKLYLKNNQFT 211

Query: 259 TLPTEIITLKCLSELSLRDNP 279
           T P EI  L+ L+ L+L D P
Sbjct: 212 TFPKEIGKLQKLNTLNLDDIP 232



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 95/165 (57%), Gaps = 4/165 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +L K + N  +++  +LS NQL   P +I  +  L+ L L NN L  +P+EI  L KL V
Sbjct: 28  NLNKALQNPMDVRTLDLSKNQLTTLPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKKLQV 87

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N LT IP   G L +L+ L L +NQL +LP  I  LK L+ L L NN+L TLP E
Sbjct: 88  LDLNDNQLTTIPKEIGYLKKLQELYLINNQLTTLPKEIGYLKKLQELYLINNQLTTLPKE 147

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I  LK    KL+ L L NN+L TLP EI  L+ L  L LR N L 
Sbjct: 148 IGYLK----KLQELYLINNQLTTLPKEIGYLEELWLLDLRKNQLT 188


>gi|427720310|ref|YP_007068304.1| adenylate cyclase [Calothrix sp. PCC 7507]
 gi|427352746|gb|AFY35470.1| Adenylate cyclase [Calothrix sp. PCC 7507]
          Length = 317

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 88/240 (36%), Positives = 126/240 (52%), Gaps = 22/240 (9%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           ++ LL+  N+L+  P    + TNL++  L  N+++ LP+ I     L  L  R+N L+  
Sbjct: 78  LEELLVLANHLTTLPSAIGQLTNLQTFVLKYNQLSSLPREIGQLSHLQLLDIRSNQLS-- 135

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           SLP+++  L +L++  L  NQL   P +I  +  L+ L LG+N L+ +PREI +L  L  
Sbjct: 136 SLPREIGQLSHLQLLYLRSNQLSSLPREIEQLTNLRSLDLGDNQLSSLPREIGQLFNLQS 195

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L D+P   G L  LE+L L DNQL +LP  I  L  L+SL L  N+L +LP E
Sbjct: 196 LYLYKNRLIDLPSEIGQLSHLESLNLGDNQLSNLPREIGQLSNLRSLGLGENQLSSLPNE 255

Query: 237 IITLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRD 277
              L  L                      L+ L+LHNN+L +LP+EI  L  L  L L D
Sbjct: 256 FTQLTNLQRLDLSFNQLSSLPKKIGQLTNLQWLILHNNQLSSLPSEIGQLTNLRSLDLAD 315



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 82/216 (37%), Positives = 115/216 (53%), Gaps = 7/216 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           NNLS  P        L  L +  N +T LP AI     L T + + N L+  SLP+++  
Sbjct: 63  NNLSALPKELGLLNQLEELLVLANHLTTLPSAIGQLTNLQTFVLKYNQLS--SLPREIGQ 120

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L +L++ ++  NQL   P +I  +  L+ LYL +N L+ +PREI +L  L  L LG N L
Sbjct: 121 LSHLQLLDIRSNQLSSLPREIGQLSHLQLLYLRSNQLSSLPREIEQLTNLRSLDLGDNQL 180

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           + +P   G L+ L++L L  N+L  LP+ I  L  L+SL L +N+L  LP EI  L    
Sbjct: 181 SSLPREIGQLFNLQSLYLYKNRLIDLPSEIGQLSHLESLNLGDNQLSNLPREIGQLS--- 237

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             L+SL L  N+L +LP E   L  L  L L  N L
Sbjct: 238 -NLRSLGLGENQLSSLPNEFTQLTNLQRLDLSFNQL 272



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 78/211 (36%), Positives = 117/211 (55%), Gaps = 26/211 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ T +L +N LS  P    + ++L+ LD+ +N+++ LP+ I     L  L  R+N L+ 
Sbjct: 100 NLQTFVLKYNQLSSLPREIGQLSHLQLLDIRSNQLSSLPREIGQLSHLQLLYLRSNQLS- 158

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQI----------------LDIPT-------LK 152
            SLP+++  L NL+  +L  NQL   P +I                +D+P+       L+
Sbjct: 159 -SLPREIEQLTNLRSLDLGDNQLSSLPREIGQLFNLQSLYLYKNRLIDLPSEIGQLSHLE 217

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            L LG+N L+++PREI +L  L  L LG N L+ +P+ F  L  L+ L LS NQL SLP 
Sbjct: 218 SLNLGDNQLSNLPREIGQLSNLRSLGLGENQLSSLPNEFTQLTNLQRLDLSFNQLSSLPK 277

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
            I  L  L+ L+LHNN+L +LP+EI  L  L
Sbjct: 278 KIGQLTNLQWLILHNNQLSSLPSEIGQLTNL 308



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 87/240 (36%), Positives = 119/240 (49%), Gaps = 21/240 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSL--------------DLSNNRITHLPQAITNF 101
           E +  L L  NNL+  P    K T L+ L              D+  N ++ LP+ +   
Sbjct: 16  EGVTELDLSGNNLTALPPEIGKLTQLKKLILGKYQYDQEGYIVDIIGNNLSALPKELGLL 75

Query: 102 -PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
             L  L+   N LT  +LP  +  L NL+ F L  NQL   P +I  +  L+ L + +N 
Sbjct: 76  NQLEELLVLANHLT--TLPSAIGQLTNLQTFVLKYNQLSSLPREIGQLSHLQLLDIRSNQ 133

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L+ +PREI +L  L +L L  N L+ +P     L  L +L L DNQL SLP  I  L  L
Sbjct: 134 LSSLPREIGQLSHLQLLYLRSNQLSSLPREIEQLTNLRSLDLGDNQLSSLPREIGQLFNL 193

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +SL L+ N+L  LP+EI  L      L+SL L +N+L  LP EI  L  L  L L +N L
Sbjct: 194 QSLYLYKNRLIDLPSEIGQLS----HLESLNLGDNQLSNLPREIGQLSNLRSLGLGENQL 249



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 91/199 (45%), Gaps = 16/199 (8%)

Query: 84  LDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
           LDLS N +T LP  I     L  LI        E             + ++ GN L   P
Sbjct: 21  LDLSGNNLTALPPEIGKLTQLKKLILGKYQYDQEG-----------YIVDIIGNNLSALP 69

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
            ++  +  L+ L +  N L  +P  I +L  L    L  N L+ +P   G L  L+ L +
Sbjct: 70  KELGLLNQLEELLVLANHLTTLPSAIGQLTNLQTFVLKYNQLSSLPREIGQLSHLQLLDI 129

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
             NQL SLP  I  L  L+ L L +N+L +LP EI  L      L+SL L +N+L +LP 
Sbjct: 130 RSNQLSSLPREIGQLSHLQLLYLRSNQLSSLPREIEQLT----NLRSLDLGDNQLSSLPR 185

Query: 263 EIITLKCLSELSLRDNPLV 281
           EI  L  L  L L  N L+
Sbjct: 186 EIGQLFNLQSLYLYKNRLI 204


>gi|421116143|ref|ZP_15576532.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410012309|gb|EKO70411.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 356

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 98/253 (38%), Positives = 127/253 (50%), Gaps = 30/253 (11%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI-------------- 98
           K P ++  L L    L+  P    +  NL+SLDL+NN+   LP+ I              
Sbjct: 45  KNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNN 104

Query: 99  --TNFP--------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDI 148
              N P        L TLI   N LT  + P+++  LKNL+  NL  NQL     +I  +
Sbjct: 105 QLKNLPKEIGQLQNLQTLILSVNRLT--TFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQL 162

Query: 149 PTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLE 208
            +L+ L L  N L  +P EI +L  L  L L  N LT +P+  G L  L+ALIL DNQL 
Sbjct: 163 QSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLT 222

Query: 209 SLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLK 268
            LP  I  L+ LK L   NN+L  LP EI  L    +KL+ L L +N+L TLP EI  L+
Sbjct: 223 ILPKEIGQLQNLKLLYSVNNELTILPQEIGQL----QKLQYLYLSHNQLTTLPKEIGQLE 278

Query: 269 CLSELSLRDNPLV 281
            L EL L DN L 
Sbjct: 279 NLQELYLNDNQLT 291



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/263 (34%), Positives = 133/263 (50%), Gaps = 32/263 (12%)

Query: 46  LPNNDYNKKP------ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN +   P      +N+  L L++N L   P    +  NL++L LS NR+T  PQ I 
Sbjct: 78  LANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTFPQEIG 137

Query: 100 NFP-----------LSTLIARNNLLTA-----------ESLPKDMSNLKNLKVFNLSGNQ 137
                         L+TL+     L +           ++LP ++  L+NL+   LS NQ
Sbjct: 138 QLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQ 197

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           L   P +I  +  L+ L LG+N L  +P+EI +L  L +L    N LT +P   G L +L
Sbjct: 198 LTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKL 257

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
           + L LS NQL +LP  I  L+ L+ L L++N+L TLP EI  LK     L++ +  NN+L
Sbjct: 258 QYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLPKEIGQLK----NLQTFISFNNQL 313

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
             LP EI  L+ L  L L +N L
Sbjct: 314 TMLPQEIGQLQNLQWLKLNNNQL 336



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 85/234 (36%), Positives = 116/234 (49%), Gaps = 30/234 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP------------- 102
           +N+ TL+L  N L+ FP    +  NL+ L+L  N++T L Q I                 
Sbjct: 117 QNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLK 176

Query: 103 -----------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
                      L  L   NN LT   LP+++  LKNL+   L  NQL   P +I  +  L
Sbjct: 177 ALPNEIGQLQNLQELYLSNNQLTI--LPEEIGQLKNLQALILGDNQLTILPKEIGQLQNL 234

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           K LY  NN L  +P+EI +L KL  L L  N LT +P   G L  L+ L L+DNQL +LP
Sbjct: 235 KLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLENLQELYLNDNQLTTLP 294

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
             I  LK L++ +  NN+L  LP EI  L    + L+ L L+NN+L +   E I
Sbjct: 295 KEIGQLKNLQTFISFNNQLTMLPQEIGQL----QNLQWLKLNNNQLSSQEEERI 344



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 70/166 (42%), Positives = 92/166 (55%), Gaps = 4/166 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++  L+NLK  +L+ NQ +  P +I  +  L+ L L NN L ++P+EI +L  L  
Sbjct: 62  TLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQT 121

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N LT  P   G L  L+ L L  NQL +L   I  L+ L+ L L  N+L+ LP E
Sbjct: 122 LILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLQSLQKLNLDKNRLKALPNE 181

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           I  L+ L E    L L NN+L  LP EI  LK L  L L DN L I
Sbjct: 182 IGQLQNLQE----LYLSNNQLTILPEEIGQLKNLQALILGDNQLTI 223



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/169 (39%), Positives = 91/169 (53%), Gaps = 4/169 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLS  +L   P +I  +  LK L L NN    +P+EI +L  
Sbjct: 36  TYRDLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N L ++P   G L  L+ LILS N+L + P  I  LK L+ L L  N+L TL
Sbjct: 96  LQELNLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
             EI  L+     L+ L L  N+L+ LP EI  L+ L EL L +N L I
Sbjct: 156 LQEIGQLQS----LQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTI 200



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 4/110 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+     +   +  L LS  +L +LP  I  L+ LKSL L NN+ +
Sbjct: 25  CEIQAEKIKPGTYRDLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFK 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           TLP EI  L+ L E    L L NN+L+ LP EI  L+ L  L L  N L 
Sbjct: 85  TLPKEIGQLQNLQE----LNLWNNQLKNLPKEIGQLQNLQTLILSVNRLT 130


>gi|124008181|ref|ZP_01692878.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123986280|gb|EAY26102.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 391

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 92/250 (36%), Positives = 136/250 (54%), Gaps = 18/250 (7%)

Query: 33  SLDSETLATQIELL---PNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNN 89
            LD + + T +E+    PN+ Y  K  N D L+L            ++F NL+ L+L  N
Sbjct: 43  ELDKKPIYTSLEVALEQPNDVYMMKLANKDMLVLS--------KKIARFKNLQVLNLQQN 94

Query: 90  RITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDI 148
           ++T LP  I +   L  LI  NN L  E LP ++  L +L    +S N+L   P +I  +
Sbjct: 95  KLTELPPEIGDLTKLQKLILSNNQL--EKLPPEIGKLTHLLELRVSANRLTTLPPEIGKL 152

Query: 149 PTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLE 208
            +L+YLY+ NN L  +P EI +L +L  L L  N LT +P + G L  L++LIL++N++ 
Sbjct: 153 QSLQYLYIPNNKLITLPPEIGQLAQLKRLFLEHNQLTQLPASIGKLNNLQSLILNNNRVN 212

Query: 209 SLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLK 268
            LP  I  LK L +  L NN+L+ LP EI+TL    + LK L L  N+L+ LP ++  L 
Sbjct: 213 QLPHEIGQLKNLHTFYLANNRLKELPQEILTL----QNLKKLYLVGNQLQQLPPQLAKLD 268

Query: 269 CLSELSLRDN 278
            L  L L+ N
Sbjct: 269 KLQILDLQKN 278



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 126/228 (55%), Gaps = 7/228 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +++  L + +N L   P    +   L+ L L +N++T LP +I     L +LI  NN 
Sbjct: 151 KLQSLQYLYIPNNKLITLPPEIGQLAQLKRLFLEHNQLTQLPASIGKLNNLQSLILNNN- 209

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
                LP ++  LKNL  F L+ N+L++ P +IL +  LK LYL  N L  +P ++ KL 
Sbjct: 210 -RVNQLPHEIGQLKNLHTFYLANNRLKELPQEILTLQNLKKLYLVGNQLQQLPPQLAKLD 268

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL +L L  N+ +++P     L  L+ L L++NQL SL A I  L+ L+ L L  NK+  
Sbjct: 269 KLQILDLQKNNFSEVPAAITKLTNLQKLWLNNNQLTSLNAEIGKLQNLQILYLEENKITE 328

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           LPT I +++     LK L L +N L +LP EI  L+ L  L LR+N L
Sbjct: 329 LPTSIGSIQS----LKHLSLSDNMLTSLPQEIGQLRKLQALYLRNNQL 372



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 12/127 (9%)

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           ++++ L    +  +         L+ L L  N+L  LP  I +L  L+ L+L NN+L  L
Sbjct: 63  VYMMKLANKDMLVLSKKIARFKNLQVLNLQQNKLTELPPEIGDLTKLQKLILSNNQLEKL 122

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPP 293
           P EI  L  L E    L +  N+L TLP EI  L+ L  L + +N L+          PP
Sbjct: 123 PPEIGKLTHLLE----LRVSANRLTTLPPEIGKLQSLQYLYIPNNKLITL--------PP 170

Query: 294 SLLELAS 300
            + +LA 
Sbjct: 171 EIGQLAQ 177



 Score = 38.1 bits (87), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 53/108 (49%), Gaps = 15/108 (13%)

Query: 193 DLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLL 252
           D+Y ++   L++  +  L   I+  K L+ L L  NKL  LP EI  L     KL+ L+L
Sbjct: 62  DVYMMK---LANKDMLVLSKKIARFKNLQVLNLQQNKLTELPPEIGDLT----KLQKLIL 114

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELAS 300
            NN+L  LP EI  L  L EL +  N         +T  PP + +L S
Sbjct: 115 SNNQLEKLPPEIGKLTHLLELRVSAN--------RLTTLPPEIGKLQS 154


>gi|260831320|ref|XP_002610607.1| hypothetical protein BRAFLDRAFT_65797 [Branchiostoma floridae]
 gi|229295974|gb|EEN66617.1| hypothetical protein BRAFLDRAFT_65797 [Branchiostoma floridae]
          Length = 509

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 106/335 (31%), Positives = 157/335 (46%), Gaps = 22/335 (6%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L +N L   PD+      L  L +  N +  LP +I N   L+ L  +NN L   ++P  
Sbjct: 182 LSNNRLHQLPDDIGCLRGLEELYIQYNCLEELPVSIGNLTKLTDLDCKNNSL--RTIPLT 239

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           + NL  L   N++ N L++ P ++  +  L+ +   +N L  +P E+  L  L  L LG 
Sbjct: 240 VGNLSALTCLNVTNNVLQRLPAELGRLTELEEICAHSNQLVELPDELCNLTNLTELYLGE 299

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P   G L +LE L +S  +L  LP S+S    L  L L NN+LR LP ++  L 
Sbjct: 300 NRLQQLPQDMGRLVRLEELDVSSCELTHLPDSLSRCTSLVRLWLSNNRLRYLPDQLGRL- 358

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI----RFVSDMTYKP----P 293
                LK L + NN +   P  +  L+ L   S   NPL+     R  S +   P    P
Sbjct: 359 ---HHLKELHVRNNDIMYFPASLSYLQ-LYTFSANQNPLIEEWDNRLTSALIRVPTDPLP 414

Query: 294 SLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCG 353
           SLLELA+RT+    I + +  LP +L   L+    C +  C+G FF      + F +   
Sbjct: 415 SLLELAARTVARQNITWGKGDLPLDLEVLLQCRKQCSS--CEGPFFSYFSSQVFFSNVGM 472

Query: 354 KYRIPLLQYLCSSRCITNSPNVMYGDVKNEDMMKK 388
            +R+PL Q +CS     +   V   D    DMM+K
Sbjct: 473 FHRVPLYQQVCSPYVNAHCQPVHARD----DMMEK 503



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 65/197 (32%), Positives = 88/197 (44%), Gaps = 39/197 (19%)

Query: 147 DIPT-LKYLYLGNNSLNHVPREINKL-CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD 204
           D PT L   YLG   L+  P  I  +  +L  L+L  N L  +PD  G L  LE L +  
Sbjct: 151 DRPTDLDLSYLG---LHSCPDRIGFVGAQLTCLNLSNNRLHQLPDDIGCLRGLEELYIQY 207

Query: 205 NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS-------------------E 245
           N LE LP SI NL  L  L   NN LRT+P  +  L  L+                    
Sbjct: 208 NCLEELPVSIGNLTKLTDLDCKNNSLRTIPLTVGNLSALTCLNVTNNVLQRLPAELGRLT 267

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKV 305
           +L+ +  H+N+L  LP E+  L  L+EL L +N L  +   DM            R +++
Sbjct: 268 ELEEICAHSNQLVELPDELCNLTNLTELYLGENRLQ-QLPQDM-----------GRLVRL 315

Query: 306 HEIDYSQ---EHLPQNL 319
            E+D S     HLP +L
Sbjct: 316 EELDVSSCELTHLPDSL 332


>gi|429962035|gb|ELA41579.1| hypothetical protein VICG_01443 [Vittaforma corneae ATCC 50505]
          Length = 462

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/227 (41%), Positives = 118/227 (51%), Gaps = 12/227 (5%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L        +  NLR LDLS N++  LP  I     L  L   +N L 
Sbjct: 125 KNLKYLDLYDNKLERLSPEIGRLKNLRELDLSGNKLRTLPSEIGELVNLGILHLNDNKL- 183

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIP-TLKYLYLGNNSLNHVPREINKLCK 173
            E LP ++  LK+L    L+GN LE  P  I ++   L YLYL  N L  +P EI +L  
Sbjct: 184 -ERLPPEIGRLKDLWRLYLNGNNLEALPETIENLKDRLWYLYLNGNKLKTLPPEIGELVN 242

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N L  +P   G L  L  L L+ N LE+LP +I  LK L+ L L+ NKL+TL
Sbjct: 243 LGILHLNDNKLERLPPEIGRLKNLRELGLNGNNLEALPETIRELKKLQYLYLNGNKLKTL 302

Query: 234 PTEIITLKCLSEKLKSLLLH--NNKLRTLPTEIITLKCLSELSLRDN 278
           P EI  LK L      L+LH   NKL  LP EI  L+ L  L L DN
Sbjct: 303 PPEIGELKWL------LVLHLNGNKLERLPPEIGELEGLYTLYLNDN 343



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/267 (36%), Positives = 131/267 (49%), Gaps = 11/267 (4%)

Query: 61  LLLYHNNLSFFPDNASKFTN-LRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESL 118
           L L  NNL   P+      + L  L L+ N++  LP  I     L  L   +N L  E L
Sbjct: 199 LYLNGNNLEALPETIENLKDRLWYLYLNGNKLKTLPPEIGELVNLGILHLNDNKL--ERL 256

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P ++  LKNL+   L+GN LE  P  I ++  L+YLYL  N L  +P EI +L  L VL 
Sbjct: 257 PPEIGRLKNLRELGLNGNNLEALPETIRELKKLQYLYLNGNKLKTLPPEIGELKWLLVLH 316

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           L GN L  +P   G+L  L  L L+DN+ E+LP+ I  LK L+ L L  NKL  LP  I 
Sbjct: 317 LNGNKLERLPPEIGELEGLYTLYLNDNEFETLPSEIGKLKNLRHLHLSGNKLERLPYVIA 376

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITL--KCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
            LK L E    L L  NKL TLP+ I+ +    L  L LR N +        T     L 
Sbjct: 377 ELKNLRE----LDLSGNKLETLPSYIVRMLSGSLQLLDLRGNNIYEVGDGKRTLGKKELR 432

Query: 297 ELASRTLKVHEIDYSQEHLPQNLVQYL 323
           E+    +K  E + SQ  L +   +++
Sbjct: 433 EIFGDRVKFDE-EASQWSLWKCFTEFV 458



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 87/227 (38%), Positives = 116/227 (51%), Gaps = 8/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E++D L L  N          +  NL+ LDL +N++  L   I     L  L    N L 
Sbjct: 102 ESLDGLYLNGNEFETLSPVIGELKNLKYLDLYDNKLERLSPEIGRLKNLRELDLSGNKL- 160

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC-K 173
             +LP ++  L NL + +L+ N+LE+ P +I  +  L  LYL  N+L  +P  I  L  +
Sbjct: 161 -RTLPSEIGELVNLGILHLNDNKLERLPPEIGRLKDLWRLYLNGNNLEALPETIENLKDR 219

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L GN L  +P   G+L  L  L L+DN+LE LP  I  LK L+ L L+ N L  L
Sbjct: 220 LWYLYLNGNKLKTLPPEIGELVNLGILHLNDNKLERLPPEIGRLKNLRELGLNGNNLEAL 279

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P  I  LK    KL+ L L+ NKL+TLP EI  LK L  L L  N L
Sbjct: 280 PETIRELK----KLQYLYLNGNKLKTLPPEIGELKWLLVLHLNGNKL 322



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 87/231 (37%), Positives = 112/231 (48%), Gaps = 13/231 (5%)

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNL 125
           N++   D   +   L  LDLS   +  LP  I     L  L    N    E+L   +  L
Sbjct: 67  NITSLHDVIEELKYLCCLDLSRKELRSLPPEIGELESLDGLYLNGN--EFETLSPVIGEL 124

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           KNLK  +L  N+LE+   +I  +  L+ L L  N L  +P EI +L  L +L L  N L 
Sbjct: 125 KNLKYLDLYDNKLERLSPEIGRLKNLRELDLSGNKLRTLPSEIGELVNLGILHLNDNKLE 184

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLK-MLKSLLLHNNKLRTLPTEIITLKCLS 244
            +P   G L  L  L L+ N LE+LP +I NLK  L  L L+ NKL+TLP EI  L  L 
Sbjct: 185 RLPPEIGRLKDLWRLYLNGNNLEALPETIENLKDRLWYLYLNGNKLKTLPPEIGELVNLG 244

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN-----PLVIRFVSDMTY 290
                L L++NKL  LP EI  LK L EL L  N     P  IR +  + Y
Sbjct: 245 ----ILHLNDNKLERLPPEIGRLKNLRELGLNGNNLEALPETIRELKKLQY 291



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/220 (35%), Positives = 111/220 (50%), Gaps = 8/220 (3%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
              +E LP    N K + +  L L  N L   P    +  NL  L L++N++  LP  I 
Sbjct: 203 GNNLEALPETIENLK-DRLWYLYLNGNKLKTLPPEIGELVNLGILHLNDNKLERLPPEIG 261

Query: 100 NFP-LSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
               L  L +  NNL   E+LP+ +  LK L+   L+GN+L+  P +I ++  L  L+L 
Sbjct: 262 RLKNLRELGLNGNNL---EALPETIRELKKLQYLYLNGNKLKTLPPEIGELKWLLVLHLN 318

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
            N L  +P EI +L  L+ L L  N    +P   G L  L  L LS N+LE LP  I+ L
Sbjct: 319 GNKLERLPPEIGELEGLYTLYLNDNEFETLPSEIGKLKNLRHLHLSGNKLERLPYVIAEL 378

Query: 218 KMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
           K L+ L L  NKL TLP+ I+  + LS  L+ L L  N +
Sbjct: 379 KNLRELDLSGNKLETLPSYIV--RMLSGSLQLLDLRGNNI 416


>gi|359727310|ref|ZP_09266006.1| hypothetical protein Lwei2_10290 [Leptospira weilii str.
           2006001855]
          Length = 307

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/229 (39%), Positives = 120/229 (52%), Gaps = 10/229 (4%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K  N+  L L  N     P    +  NL+ LDLS N +  LP+ I     L  L    N 
Sbjct: 69  KLRNLQILYLSGNQFKALPKEIGQLQNLQKLDLSGNELAILPEEIGQLKKLQELFLDGNQ 128

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L  E+LPK++  ++NL+  +LSGNQL   P +I  +  L+ L L +N L  +P+EI +L 
Sbjct: 129 L--ETLPKEIEKIQNLQKLDLSGNQLTNLPKEIGKLHKLQVLELNSNQLKTLPKEIGQLQ 186

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  L L GN L  +P   G L +L+ L L++NQL  LP  I  LK L    L +N+L  
Sbjct: 187 KLPDLDLSGNQLETLPKEIGQLQKLQKLDLAENQLAVLPKGIEKLKELD---LSSNQLTN 243

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L  EI  LK     L+ L L  N+L TLP EI  L+ L EL L  NP+ 
Sbjct: 244 LSQEIGKLK----NLRILNLDYNRLTTLPKEIGKLQNLRELYLHKNPIA 288



 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/203 (40%), Positives = 114/203 (56%), Gaps = 10/203 (4%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           ++R L+LS +R+T LP+ I     L  L    N   A  LPK++  L+NL+  +LSGN+L
Sbjct: 49  DVRVLNLSGDRLTTLPKEIGKLRNLQILYLSGNQFKA--LPKEIGQLQNLQKLDLSGNEL 106

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
              P +I  +  L+ L+L  N L  +P+EI K+  L  L L GN LT++P   G L++L+
Sbjct: 107 AILPEEIGQLKKLQELFLDGNQLETLPKEIEKIQNLQKLDLSGNQLTNLPKEIGKLHKLQ 166

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L L+ NQL++LP  I  L+ L  L L  N+L TLP EI  L    +KL+ L L  N+L 
Sbjct: 167 VLELNSNQLKTLPKEIGQLQKLPDLDLSGNQLETLPKEIGQL----QKLQKLDLAENQLA 222

Query: 259 TLPTEIITLKCLSELSLRDNPLV 281
            LP  I  LK   EL L  N L 
Sbjct: 223 VLPKGIEKLK---ELDLSSNQLT 242



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 97/167 (58%), Gaps = 4/167 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +L K + N K+++V NLSG++L   P +I  +  L+ LYL  N    +P+EI +L  
Sbjct: 36  TYRNLTKALKNPKDVRVLNLSGDRLTTLPKEIGKLRNLQILYLSGNQFKALPKEIGQLQN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L GN L  +P+  G L +L+ L L  NQLE+LP  I  ++ L+ L L  N+L  L
Sbjct: 96  LQKLDLSGNELAILPEEIGQLKKLQELFLDGNQLETLPKEIEKIQNLQKLDLSGNQLTNL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P EI  L     KL+ L L++N+L+TLP EI  L+ L +L L  N L
Sbjct: 156 PKEIGKL----HKLQVLELNSNQLKTLPKEIGQLQKLPDLDLSGNQL 198



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/166 (41%), Positives = 96/166 (57%), Gaps = 4/166 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++  L+NL++  LSGNQ +  P +I  +  L+ L L  N L  +P EI +L KL  
Sbjct: 62  TLPKEIGKLRNLQILYLSGNQFKALPKEIGQLQNLQKLDLSGNELAILPEEIGQLKKLQE 121

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L GN L  +P     +  L+ L LS NQL +LP  I  L  L+ L L++N+L+TLP E
Sbjct: 122 LFLDGNQLETLPKEIEKIQNLQKLDLSGNQLTNLPKEIGKLHKLQVLELNSNQLKTLPKE 181

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           I  L    +KL  L L  N+L TLP EI  L+ L +L L +N L +
Sbjct: 182 IGQL----QKLPDLDLSGNQLETLPKEIGQLQKLQKLDLAENQLAV 223


>gi|124005686|ref|ZP_01690525.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123988754|gb|EAY28360.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 439

 Score =  120 bits (301), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 118/368 (32%), Positives = 175/368 (47%), Gaps = 47/368 (12%)

Query: 28  DFSYSSLDSE---TLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSL 84
              Y  LD     TL T+ +LL         +N+  L L HN  S FPD      +L+ L
Sbjct: 90  QMKYIGLDGNNLTTLPTEFKLL---------QNVINLHLDHNPFSTFPDEIFSLASLQDL 140

Query: 85  DLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPI 143
            L +  ++ LP  I     L  L  RNN L    LP  +++LKNL+  NLSGNQ    P 
Sbjct: 141 ALGDTGLSSLPSGIGRLRRLQKLDLRNNQLAY--LPTKITHLKNLRHLNLSGNQFTTLPK 198

Query: 144 QILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILS 203
           ++  +  L YL + +N +  +    + L  L  LSLG N+LT++P    +L  LE L LS
Sbjct: 199 EVNSLKELVYLNISDNPITTLSLNPSSLQNLRSLSLGNNNLTELPPEIFELKNLEVLWLS 258

Query: 204 DNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS------------------- 244
            NQ+++LP  I  LK L+ L L++N+L  LP EI  LK L                    
Sbjct: 259 KNQIKNLPPEIKKLKHLEELYLYSNQLSALPPEIGELKELFMLGLDKNQLSDLPPEIGQL 318

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLK 304
           + L+ L +  NKL  LP EI+ LK L EL L DN         +TY P    +  ++ LK
Sbjct: 319 KNLQGLYVPKNKLALLPNEIVNLKDLRELRLSDN--------QLTYLPEE--KWKTKHLK 368

Query: 305 VHEIDYSQ-EHLPQNL--VQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQ 361
           V  +D +Q + LP  +  ++ LE+ +   N   +     + ++ ++++D  G   I   +
Sbjct: 369 VLYLDSNQLKTLPIGICSLKNLETLNLSFNELEELPSEVSNLKSLRWLDLEGNLSIAEKK 428

Query: 362 YLCSSRCI 369
               SRCI
Sbjct: 429 IGGLSRCI 436



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/268 (30%), Positives = 122/268 (45%), Gaps = 38/268 (14%)

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            E LP ++  L+ +K   L GN L   P +   +  +  L+L +N  +  P EI  L  L
Sbjct: 78  VEYLPPEVGQLQQMKYIGLDGNNLTTLPTEFKLLQNVINLHLDHNPFSTFPDEIFSLASL 137

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+LG   L+ +P   G L +L+ L L +NQL  LP  I++LK L+ L L  N+  TLP
Sbjct: 138 QDLALGDTGLSSLPSGIGRLRRLQKLDLRNNQLAYLPTKITHLKNLRHLNLSGNQFTTLP 197

Query: 235 TEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            E+ +LK L                    + L+SL L NN L  LP EI  LK L  L L
Sbjct: 198 KEVNSLKELVYLNISDNPITTLSLNPSSLQNLRSLSLGNNNLTELPPEIFELKNLEVLWL 257

Query: 276 RDN-----PLVIR----------FVSDMTYKPPSLLELASRTLKVHEIDYSQ-EHLPQNL 319
             N     P  I+          + + ++  PP + EL  + L +  +D +Q   LP  +
Sbjct: 258 SKNQIKNLPPEIKKLKHLEELYLYSNQLSALPPEIGEL--KELFMLGLDKNQLSDLPPEI 315

Query: 320 VQYLESAHHCVNPKCKGVFFDNRIEHIK 347
            Q L++      PK K     N I ++K
Sbjct: 316 GQ-LKNLQGLYVPKNKLALLPNEIVNLK 342



 Score = 78.6 bits (192), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/174 (35%), Positives = 88/174 (50%), Gaps = 9/174 (5%)

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
              LS   +E  P ++  +  +KY+ L  N+L  +P E   L  +  L L  N  +  PD
Sbjct: 70  TLGLSSKGVEYLPPEVGQLQQMKYIGLDGNNLTTLPTEFKLLQNVINLHLDHNPFSTFPD 129

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
               L  L+ L L D  L SLP+ I  L+ L+ L L NN+L  LPT+I  LK     L+ 
Sbjct: 130 EIFSLASLQDLALGDTGLSSLPSGIGRLRRLQKLDLRNNQLAYLPTKITHLK----NLRH 185

Query: 250 LLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTL 303
           L L  N+  TLP E+ +LK L  L++ DNP     ++ ++  P SL  L S +L
Sbjct: 186 LNLSGNQFTTLPKEVNSLKELVYLNISDNP-----ITTLSLNPSSLQNLRSLSL 234



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 4/116 (3%)

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
           + I +L     L L    +  +P   G L Q++ + L  N L +LP     L+ + +L L
Sbjct: 60  QHIKELYTTDTLGLSSKGVEYLPPEVGQLQQMKYIGLDGNNLTTLPTEFKLLQNVINLHL 119

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            +N   T P EI +L  L +    L L +  L +LP+ I  L+ L +L LR+N L 
Sbjct: 120 DHNPFSTFPDEIFSLASLQD----LALGDTGLSSLPSGIGRLRRLQKLDLRNNQLA 171


>gi|434388059|ref|YP_007098670.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
 gi|428019049|gb|AFY95143.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
          Length = 993

 Score =  120 bits (300), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/254 (35%), Positives = 134/254 (52%), Gaps = 17/254 (6%)

Query: 32  SSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRI 91
           +SLD      +I+ LP  D+  +  N+  L LY N +   P+  S+ T L  L L N+ +
Sbjct: 75  TSLD--VWENKIKSLP--DWLAQITNLTKLYLYGNKIESLPNWFSEMTRLTELGLGNSGL 130

Query: 92  THLPQAITNFPLSTL----IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILD 147
             +P+ +  F L+ L     + NNL   + LP+ +SNLKNLK  +L GN L Q P  I  
Sbjct: 131 AEIPELV--FSLTNLTYLGFSENNL---QVLPESISNLKNLKKLSLGGNSLSQLPESIAL 185

Query: 148 IPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQL 207
           +  L+ LY+  N L  +P+ I KL  L  L+LG N + ++P   G L  L +L L  NQ+
Sbjct: 186 LTELEELYIWENKLTEIPQAIGKLTSLTSLNLGENQIAELPQMIGKLTSLTSLKLWSNQI 245

Query: 208 ESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITL 267
             +P +I NL  L +L L +N++  +P  I  L  L+    SL L  N++  LP  I  L
Sbjct: 246 AIIPEAIGNLTSLTALGLSSNQIAIIPEAIGNLTSLT----SLDLSFNQIAELPQTIGNL 301

Query: 268 KCLSELSLRDNPLV 281
             L+ LSLR+N + 
Sbjct: 302 TSLTSLSLRNNQIA 315



 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 123/225 (54%), Gaps = 7/225 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAE 116
           + +L L+ N ++  P+     T+L +L LS+N+I  +P+AI N   L++L    N +   
Sbjct: 235 LTSLKLWSNQIAIIPEAIGNLTSLTALGLSSNQIAIIPEAIGNLTSLTSLDLSFNQIA-- 292

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            LP+ + NL +L   +L  NQ+ + P  I ++ +L  L+LG N +  +P+ I  L  L  
Sbjct: 293 ELPQTIGNLTSLTSLSLRNNQIAELPQTIGNLTSLTNLFLGRNKIAELPQTIGNLTSLTS 352

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N + ++P T G+L  L +L LS NQ+  LP +I NL  L SL L+NN++  LP  
Sbjct: 353 LYLSNNQIAELPQTIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLNLYNNQIAELPQT 412

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I  L  L+    +L L NN++  LP  I  L  L+ L+L  N + 
Sbjct: 413 IGNLTSLT----NLFLSNNQIAELPQTIGNLTSLTSLNLWSNQIA 453



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 137/274 (50%), Gaps = 19/274 (6%)

Query: 22  VSIKTLDFSYSSLDS--ETLATQIEL----LPNNDYNKKPENIDTL------LLYHNNLS 69
            S+ +LD S++ +    +T+     L    L NN   + P+ I  L       L  N ++
Sbjct: 279 TSLTSLDLSFNQIAELPQTIGNLTSLTSLSLRNNQIAELPQTIGNLTSLTNLFLGRNKIA 338

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNL 128
             P      T+L SL LSNN+I  LPQ I N   L++L    N +    LP+ + NL +L
Sbjct: 339 ELPQTIGNLTSLTSLYLSNNQIAELPQTIGNLTSLTSLDLSFNQIA--ELPQTIGNLTSL 396

Query: 129 KVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
              NL  NQ+ + P  I ++ +L  L+L NN +  +P+ I  L  L  L+L  N + ++P
Sbjct: 397 TSLNLYNNQIAELPQTIGNLTSLTNLFLSNNQIAELPQTIGNLTSLTSLNLWSNQIAELP 456

Query: 189 DTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLK 248
            T G+L  L +L LS NQ+  LP  I NL  L +L L  N++  L   I  L  LS+   
Sbjct: 457 QTIGNLTSLTSLDLSFNQIAELPQMIGNLTSLTNLNLSFNQIAELLQTIGNLTSLSD--- 513

Query: 249 SLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            L L NN++  LP  I  L  L++L L +N + +
Sbjct: 514 -LDLSNNQIAELPQTIGNLTSLTDLKLYNNQIAV 546



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 111/226 (49%), Gaps = 7/226 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+  L    NNL   P++ S   NL+ L L  N ++ LP++I     L  L    N LT 
Sbjct: 142 NLTYLGFSENNLQVLPESISNLKNLKKLSLGGNSLSQLPESIALLTELEELYIWENKLT- 200

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+ +  L +L   NL  NQ+ + P  I  + +L  L L +N +  +P  I  L  L 
Sbjct: 201 -EIPQAIGKLTSLTSLNLGENQIAELPQMIGKLTSLTSLKLWSNQIAIIPEAIGNLTSLT 259

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N +  IP+  G+L  L +L LS NQ+  LP +I NL  L SL L NN++  LP 
Sbjct: 260 ALGLSSNQIAIIPEAIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLSLRNNQIAELPQ 319

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            I  L  L+    +L L  NK+  LP  I  L  L+ L L +N + 
Sbjct: 320 TIGNLTSLT----NLFLGRNKIAELPQTIGNLTSLTSLYLSNNQIA 361



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 106/209 (50%), Gaps = 10/209 (4%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN   + P+ I  L       L  N ++  P      T+L SL+L NN+I  LPQ I 
Sbjct: 355 LSNNQIAELPQTIGNLTSLTSLDLSFNQIAELPQTIGNLTSLTSLNLYNNQIAELPQTIG 414

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
           N   L+ L   NN +    LP+ + NL +L   NL  NQ+ + P  I ++ +L  L L  
Sbjct: 415 NLTSLTNLFLSNNQIA--ELPQTIGNLTSLTSLNLWSNQIAELPQTIGNLTSLTSLDLSF 472

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N +  +P+ I  L  L  L+L  N + ++  T G+L  L  L LS+NQ+  LP +I NL 
Sbjct: 473 NQIAELPQMIGNLTSLTNLNLSFNQIAELLQTIGNLTSLSDLDLSNNQIAELPQTIGNLT 532

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
            L  L L+NN++  +P    +L  L EKL
Sbjct: 533 SLTDLKLYNNQIAVIPEWFRSLNNL-EKL 560



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 70/211 (33%), Positives = 101/211 (47%), Gaps = 17/211 (8%)

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTLI----------ARNNLLTAESLPKDMSNLKNLKV 130
           + LDL+   +T LP  I     L  LI          A  NLLT   +P  + +L  L  
Sbjct: 19  KELDLAGMNLTELPPEIGKLTHLEKLILGKWDDKTGKAIGNLLT--EIPPVILSLPKLTS 76

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            ++  N+++  P  +  I  L  LYL  N +  +P   +++ +L  L LG + L +IP+ 
Sbjct: 77  LDVWENKIKSLPDWLAQITNLTKLYLYGNKIESLPNWFSEMTRLTELGLGNSGLAEIPEL 136

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
              L  L  L  S+N L+ LP SISNLK LK L L  N L  LP  I     L  +L+ L
Sbjct: 137 VFSLTNLTYLGFSENNLQVLPESISNLKNLKKLSLGGNSLSQLPESI----ALLTELEEL 192

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            +  NKL  +P  I  L  L+ L+L +N + 
Sbjct: 193 YIWENKLTEIPQAIGKLTSLTSLNLGENQIA 223



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 69/218 (31%), Positives = 110/218 (50%), Gaps = 15/218 (6%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
            S+ +LD S++         QI  LP    N    ++ +L LY+N ++  P      T+L
Sbjct: 371 TSLTSLDLSFN---------QIAELPQTIGNLT--SLTSLNLYNNQIAELPQTIGNLTSL 419

Query: 82  RSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
            +L LSNN+I  LPQ I N   L++L   +N +    LP+ + NL +L   +LS NQ+ +
Sbjct: 420 TNLFLSNNQIAELPQTIGNLTSLTSLNLWSNQIA--ELPQTIGNLTSLTSLDLSFNQIAE 477

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P  I ++ +L  L L  N +  + + I  L  L  L L  N + ++P T G+L  L  L
Sbjct: 478 LPQMIGNLTSLTNLNLSFNQIAELLQTIGNLTSLSDLDLSNNQIAELPQTIGNLTSLTDL 537

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
            L +NQ+  +P    +L  L+ L L  N +  +P EI+
Sbjct: 538 KLYNNQIAVIPEWFRSLNNLEKLDLRGNPV-PIPPEIL 574



 Score = 47.0 bits (110), Expect = 0.017,   Method: Compositional matrix adjust.
 Identities = 39/129 (30%), Positives = 65/129 (50%), Gaps = 19/129 (14%)

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILS----------DNQLESLPASISNLKMLKSLLLH 226
           L L G +LT++P   G L  LE LIL            N L  +P  I +L  L SL + 
Sbjct: 21  LDLAGMNLTELPPEIGKLTHLEKLILGKWDDKTGKAIGNLLTEIPPVILSLPKLTSLDVW 80

Query: 227 NNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN-----PLV 281
            NK+++LP  +  +  L++    L L+ NK+ +LP     +  L+EL L ++     P +
Sbjct: 81  ENKIKSLPDWLAQITNLTK----LYLYGNKIESLPNWFSEMTRLTELGLGNSGLAEIPEL 136

Query: 282 IRFVSDMTY 290
           +  ++++TY
Sbjct: 137 VFSLTNLTY 145


>gi|417765321|ref|ZP_12413285.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352503|gb|EJP04688.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 595

 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 84/204 (41%), Positives = 120/204 (58%), Gaps = 7/204 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           ++R L+LS  ++T LP+ I     L  L  + NLLT  +LPK++  L+NL+  +L  NQL
Sbjct: 49  DVRVLNLSGEKLTALPKDIGQLKNLQELNLKWNLLT--TLPKEIGQLENLQELDLRDNQL 106

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
             FP  I+++  L+ L L  N L  +P EI +L  L  L L  N LT  P   G L  L+
Sbjct: 107 ATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQ 166

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L LS+N+L +LP  I  LK L++L L +N+  TLP EI  L    + L++L L +N+L 
Sbjct: 167 KLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQL----QNLQTLNLQDNQLA 222

Query: 259 TLPTEIITLKCLSELSLRDNPLVI 282
           TLP EI  L+ L EL LR+N L++
Sbjct: 223 TLPVEIGQLQNLQELYLRNNRLIV 246



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 115/208 (55%), Gaps = 5/208 (2%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKV 130
           FP    KF NLR L+L +   + LP+ I+       +A   L   +++P ++  LKNL+ 
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALG-LNGLKNIPSEIGQLKNLEA 426

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NL  N+LE+ P +I  +  L+ L L  N+L   P EI +L KL  L L  N  T  P  
Sbjct: 427 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
            G L  L+ L L  NQL +LPA I  LK L+ L L++N+   LP EI  LK    KL++L
Sbjct: 487 IGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLK----KLQTL 542

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L NN+L TLPTEI  L+ L  L L++N
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNN 570



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 123/249 (49%), Gaps = 24/249 (9%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLL 113
           +N+  L L  N L+  P    +  NL+ LDL +N++   P  I     L +L ++ N L+
Sbjct: 71  KNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLI 130

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L+NL+   L  N+L  FP +I  +  L+ L+L  N L  +P+EI +L  
Sbjct: 131 I---LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKN 187

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N  T +P   G L  L+ L L DNQL +LP  I  L+ L+ L L NN+L   
Sbjct: 188 LQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLIVF 247

Query: 234 PTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           P EI  L+ L                    + L++L L NN+L   P EI  L+ L +L 
Sbjct: 248 PKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLE 307

Query: 275 LRDNPLVIR 283
           L  NPL ++
Sbjct: 308 LLMNPLSLK 316



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 117/261 (44%), Gaps = 44/261 (16%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNN--------RITHLPQAITNFPLSTL- 106
           +N+ TL L +N L+ FP    +  NL+ L+L  N        RI  L      FP S L 
Sbjct: 278 QNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKL------FPDSNLD 331

Query: 107 ---IARNNLLT----------------------AESLPKDMSNLKNLKVFNLSGNQLEQF 141
              +A N +                        ++S PK +   +NL+  NL        
Sbjct: 332 LREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTL 391

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P +I  +  LKYL LG N L ++P EI +L  L  L+L  N L  +P   G L  L+ L 
Sbjct: 392 PKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLS 451

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           L  N L+  PA I  LK L+ L L  N+  T P EI  L    E L++L L  N+L  LP
Sbjct: 452 LHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKL----ENLQTLNLQRNQLTNLP 507

Query: 262 TEIITLKCLSELSLRDNPLVI 282
            EI  LK L EL L DN   +
Sbjct: 508 AEIEQLKNLQELDLNDNQFTV 528



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 111/221 (50%), Gaps = 11/221 (4%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N+  L LY    S  P   S+  NL+ L L  N + ++P  I     L  L    N 
Sbjct: 374 KFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE 433

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L  E LPK++  L+NL+  +L  N L+ FP +I  +  L+ L L  N     P+EI KL 
Sbjct: 434 L--ERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLE 491

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L+L  N LT++P     L  L+ L L+DNQ   LP  I  LK L++L L NN+L T
Sbjct: 492 NLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTT 551

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTE----IITLKC 269
           LPTEI  L    + L+ L L NN+      E    ++ LKC
Sbjct: 552 LPTEIGQL----QNLQWLYLQNNQFSFEEQERIRKLLPLKC 588



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 88/165 (53%), Gaps = 4/165 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLSG +L   P  I  +  L+ L L  N L  +P+EI +L  
Sbjct: 36  TYRDLTKALQNPLDVRVLNLSGEKLTALPKDIGQLKNLQELNLKWNLLTTLPKEIGQLEN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L   P    +L +LE+L LS+N+L  LP  I  L+ L+ L L+ NKL T 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P EI  L    + L+ L L  N+L  LP EI  LK L  L L+DN
Sbjct: 156 PKEIGQL----QNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDN 196



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 4/111 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+     +   +  L LS  +L +LP  I  LK L+ L L  N L 
Sbjct: 25  CEIQADEVEAGTYRDLTKALQNPLDVRVLNLSGEKLTALPKDIGQLKNLQELNLKWNLLT 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           TLP EI  L    E L+ L L +N+L T P  I+ L+ L  L L +N L+I
Sbjct: 85  TLPKEIGQL----ENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLII 131


>gi|440896879|gb|ELR48687.1| Malignant fibrous histiocytoma-amplified sequence 1, partial [Bos
           grunniens mutus]
          Length = 997

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 138/269 (51%), Gaps = 20/269 (7%)

Query: 27  LDFSY---SSLDSETLATQIEL----LPNNDYNKKPENIDTLL------LYHNNLSFFPD 73
           LD S+   S L +E +    EL    L +N     P  +  L+      +  N L+  PD
Sbjct: 68  LDVSHNRLSVLGAEAVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAHLPD 127

Query: 74  NASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFN 132
           + +  + LR+LD+ +N++T  P+ +     L  L   +N L    LP+D+S L+ LK+  
Sbjct: 128 SCAGLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRL--RGLPEDISALRALKILW 185

Query: 133 LSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFG 192
           LSG +L   P    ++ +L+ L L NN L  +P + ++L +L +L+L  N L + P    
Sbjct: 186 LSGAELGTLPSGFCELASLESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLLEEFPAALL 245

Query: 193 DLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLL 252
            L  LE L LS NQL S+P+ IS L  L +L L NN++R LP  I+ L  L E    L+L
Sbjct: 246 PLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEE----LVL 301

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             N++  LP     L  +    ++DNPL+
Sbjct: 302 QGNQIAVLPDNFGQLSRVGLWKIKDNPLI 330



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 114/253 (45%), Gaps = 37/253 (14%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNN-- 111
           +I+ L L +N L   PD   S   +LR L L  NR   LPQA+      L+ L   +N  
Sbjct: 16  DIEVLNLGNNGLEEVPDGLGSALGSLRVLILRRNRFAQLPQAVAELGHHLTELDVSHNRL 75

Query: 112 -LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
            +L AE+    +  L+ L+  NLS NQL   P Q+  +  L+ L +  N L H+P     
Sbjct: 76  SVLGAEA----VGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAHLPDSCAG 131

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK--------- 221
           L +L  L +  N LT  P     L  LE L +S N+L  LP  IS L+ LK         
Sbjct: 132 LSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAEL 191

Query: 222 --------------SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITL 267
                         SL+L NN LR LP +   L    ++LK L L +N L   P  ++ L
Sbjct: 192 GTLPSGFCELASLESLMLDNNGLRALPAQFSRL----QRLKMLNLSSNLLEEFPAALLPL 247

Query: 268 KCLSELSLRDNPL 280
             L EL L  N L
Sbjct: 248 AGLEELYLSRNQL 260



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 97/205 (47%), Gaps = 26/205 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF--------------- 101
            + TL + HN L+ FP    +   L  LD+S+NR+  LP+ I+                 
Sbjct: 134 RLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGT 193

Query: 102 ---------PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                     L +L+  NN L A  LP   S L+ LK+ NLS N LE+FP  +L +  L+
Sbjct: 194 LPSGFCELASLESLMLDNNGLRA--LPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLE 251

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYL  N L  VP  I+ L +L  L L  N +  +PD+  +L  LE L+L  NQ+  LP 
Sbjct: 252 ELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPD 311

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEI 237
           +   L  +    + +N L   P E+
Sbjct: 312 NFGQLSRVGLWKIKDNPLIQPPYEV 336



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 69/166 (41%), Gaps = 33/166 (19%)

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREIN-KLCKLHVLSLGGNSLTDIP----------- 188
            P  I DI  L    LGNN L  VP  +   L  L VL L  N    +P           
Sbjct: 10  LPANIGDIEVLN---LGNNGLEEVPDGLGSALGSLRVLILRRNRFAQLPQAVAELGHHLT 66

Query: 189 --------------DTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
                         +  G L +L  L LS NQL +LPA +  L  L+ L +  N+L  LP
Sbjct: 67  ELDVSHNRLSVLGAEAVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAHLP 126

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
                L     +L++L + +N+L   P +++ L  L EL +  N L
Sbjct: 127 DSCAGLS----RLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRL 168


>gi|45657064|ref|YP_001150.1| hypothetical protein [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|421087265|ref|ZP_15548106.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421105036|ref|ZP_15565629.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45600301|gb|AAS69787.1| cytoplasmic membrane protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410365346|gb|EKP20741.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410430374|gb|EKP74744.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|456987834|gb|EMG23058.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 288

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/215 (40%), Positives = 115/215 (53%), Gaps = 7/215 (3%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
            N L   P       NL+ L LS N IT LP  I N   L  L    N L  E++PK++ 
Sbjct: 59  ENPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRL--ETIPKEIG 116

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           NLK LK  ++  N+L+  P +I ++  LK LYL  N L  +P+EI  L KL  + L  N 
Sbjct: 117 NLKKLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRIHLSTNE 176

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT +P    +L  L  + L DNQ  +LP  I NLK L++L+L  N+L +L  EI  LK  
Sbjct: 177 LTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLK-- 234

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
              LK L L  N+L  LP +I  LK L+ LSL+ N
Sbjct: 235 --NLKELYLEENQLTMLPKQIAALKQLARLSLKGN 267



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/166 (40%), Positives = 96/166 (57%), Gaps = 4/166 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++LPK++ NL+NLK   LS N++   P +I ++  L+ L L  N L  +P+EI  L KL 
Sbjct: 63  KTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKKLK 122

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            LS+  N L  +P   G+L  L+ L LS NQL+ LP  I NL+ L+ + L  N+L  LP 
Sbjct: 123 ELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRIHLSTNELTKLPQ 182

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           EI  L+ L E    + L++N+  TLP EI  LK L  L L  N L+
Sbjct: 183 EIKNLESLLE----IYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLI 224



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 98/192 (51%), Gaps = 7/192 (3%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A +I  LP    N K  N+  L L  N L   P        L+ L +  N++  LP+ I 
Sbjct: 82  ANEITTLPPEIGNLK--NLQVLSLNGNRLETIPKEIGNLKKLKELSIEWNKLQTLPKEIG 139

Query: 100 NFP-LSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           N   L  L ++RN L   + LP+++ NL+ L+  +LS N+L + P +I ++ +L  +YL 
Sbjct: 140 NLKNLKELYLSRNQL---KILPQEIGNLRKLQRIHLSTNELTKLPQEIKNLESLLEIYLY 196

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           +N    +P+EI  L  L  L LG N L  +    G+L  L+ L L +NQL  LP  I+ L
Sbjct: 197 DNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELYLEENQLTMLPKQIAAL 256

Query: 218 KMLKSLLLHNNK 229
           K L  L L  N+
Sbjct: 257 KQLARLSLKGNQ 268



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 48/101 (47%), Positives = 60/101 (59%), Gaps = 4/101 (3%)

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P   G+L  L+ L LS N++ +LP  I NLK L+ L L+ N+L T+P EI  LK
Sbjct: 60  NPLKTLPKEIGNLQNLKELYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLK 119

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
               KLK L +  NKL+TLP EI  LK L EL L  N L I
Sbjct: 120 ----KLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKI 156


>gi|418727704|ref|ZP_13286292.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959062|gb|EKO22839.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 356

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 98/253 (38%), Positives = 126/253 (49%), Gaps = 30/253 (11%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI-------------- 98
           K P ++  L L    L+  P    +  NL+SLDL+NN+   LP+ I              
Sbjct: 45  KNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNN 104

Query: 99  --TNFP--------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDI 148
              N P        L TLI   N LT  + P+++  LKNL+  NL  NQL     +I  +
Sbjct: 105 QLKNLPKEIGQLQNLQTLILSVNRLT--TFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQL 162

Query: 149 PTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLE 208
             L+ L L  N L  +P EI +L  L  L L  N LT +P+  G L  L+ALIL DNQL 
Sbjct: 163 KNLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLT 222

Query: 209 SLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLK 268
            LP  I  L+ LK L   NN+L  LP EI  L    +KL+ L L +N+L TLP EI  L+
Sbjct: 223 ILPKEIGQLQNLKLLYSVNNELTILPQEIGQL----QKLQYLYLSHNQLTTLPKEIGQLE 278

Query: 269 CLSELSLRDNPLV 281
            L EL L DN L 
Sbjct: 279 NLQELYLNDNQLT 291



 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 104/303 (34%), Positives = 151/303 (49%), Gaps = 32/303 (10%)

Query: 46  LPNNDYNKKP------ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN +   P      +N+  L L++N L   P    +  NL++L LS NR+T  PQ I 
Sbjct: 78  LANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTFPQEIG 137

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L  L    N LT  +L +++  LKNL+  NL  N+L+  P +I  +  L+ LYL N
Sbjct: 138 QLKNLQKLNLDYNQLT--TLLQEIGQLKNLQKLNLDKNRLKALPNEIGQLQNLQELYLSN 195

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P EI +L  L  L LG N LT +P   G L  L+ L   +N+L  LP  I  L+
Sbjct: 196 NQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQ 255

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+ L L +N+L TLP EI  L    E L+ L L++N+L TLP EI  LK L        
Sbjct: 256 KLQYLYLSHNQLTTLPKEIGQL----ENLQELYLNDNQLTTLPKEIGQLKNLQTF----- 306

Query: 279 PLVIRFVSDMTYKPPSLLELAS-RTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGV 337
              I F + +T  P  + +L + + LK++    S +          E     + PKC+ +
Sbjct: 307 ---ISFNNQLTMLPQEIGQLQNLQWLKLNNNQLSSQE---------EERIQKLLPKCQ-I 353

Query: 338 FFD 340
           +F+
Sbjct: 354 YFE 356



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/166 (42%), Positives = 92/166 (55%), Gaps = 4/166 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++  L+NLK  +L+ NQ +  P +I  +  L+ L L NN L ++P+EI +L  L  
Sbjct: 62  TLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQNLQT 121

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N LT  P   G L  L+ L L  NQL +L   I  LK L+ L L  N+L+ LP E
Sbjct: 122 LILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTLLQEIGQLKNLQKLNLDKNRLKALPNE 181

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           I  L+ L E    L L NN+L  LP EI  LK L  L L DN L I
Sbjct: 182 IGQLQNLQE----LYLSNNQLTILPEEIGQLKNLQALILGDNQLTI 223



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 91/169 (53%), Gaps = 4/169 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLS  +L   P +I  +  LK L L NN    +P+EI +L  
Sbjct: 36  TYRDLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N L ++P   G L  L+ LILS N+L + P  I  LK L+ L L  N+L TL
Sbjct: 96  LQELNLWNNQLKNLPKEIGQLQNLQTLILSVNRLTTFPQEIGQLKNLQKLNLDYNQLTTL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
             EI  LK     L+ L L  N+L+ LP EI  L+ L EL L +N L I
Sbjct: 156 LQEIGQLK----NLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTI 200



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/141 (32%), Positives = 70/141 (49%), Gaps = 14/141 (9%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+     +   +  L LS  +L +LP  I  L+ LKSL L NN+ +
Sbjct: 25  CEIQAEKIKPGTYRDLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFK 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYK 291
           TLP EI  L+ L E    L L NN+L+ LP EI  L+ L  L L         V+ +T  
Sbjct: 85  TLPKEIGQLQNLQE----LNLWNNQLKNLPKEIGQLQNLQTLILS--------VNRLTTF 132

Query: 292 PPSLLELASRTLKVHEIDYSQ 312
           P  + +L  + L+   +DY+Q
Sbjct: 133 PQEIGQL--KNLQKLNLDYNQ 151


>gi|218440192|ref|YP_002378521.1| small GTP-binding protein [Cyanothece sp. PCC 7424]
 gi|218172920|gb|ACK71653.1| small GTP-binding protein [Cyanothece sp. PCC 7424]
          Length = 867

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 110/291 (37%), Positives = 143/291 (49%), Gaps = 38/291 (13%)

Query: 25  KTLDFSYSSLDSETLATQIELLP--------NNDYNKKPENID------TLLLYHNNLSF 70
           +TLD S+  L  ETL  QIE L         NN     P  I       +L L  N LS 
Sbjct: 19  ETLDLSFKKL--ETLPPQIEQLTHLRYLDLRNNKLTTLPPQIGKLKKLTSLNLTDNQLSA 76

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLK 129
            P    +  NL  L LS N++T+LP+ I     LS L   +N L  E+LP  +++L N+ 
Sbjct: 77  LPPEIGQLNNLSRLHLSYNKLTNLPEEIGQLTHLSELYLSHNFL--ETLPTTLNHLVNIN 134

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
             +LS NQ    P QI  + +L +  L NN L  +P EI +L  L+ L LG N LT +P 
Sbjct: 135 RLSLSYNQFTSLPPQIKGLISLSWWDLNNNQLTTLPPEIGQLKSLNQLDLGYNQLTTLPP 194

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE---- 245
             G+LY+L +L +S NQL SLP  I  L  L SL L NN+L TLP EI  L  L      
Sbjct: 195 EIGELYRLTSLDVSYNQLISLPPEIQFLINLDSLTLSNNQLATLPPEIGFLSNLISLNLS 254

Query: 246 ---------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                          KL    L +NK+ TLP EI  L  L+ L L++N L+
Sbjct: 255 YNQLTSIPPEIGQLTKLIQFRLSHNKIETLPPEIRCLTQLTSLMLKNNQLL 305



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/213 (38%), Positives = 108/213 (50%), Gaps = 5/213 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           NI+ L L +N  +  P       +L   DL+NN++T LP  I     L+ L    N LT 
Sbjct: 132 NINRLSLSYNQFTSLPPQIKGLISLSWWDLNNNQLTTLPPEIGQLKSLNQLDLGYNQLT- 190

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LP ++  L  L   ++S NQL   P +I  +  L  L L NN L  +P EI  L  L 
Sbjct: 191 -TLPPEIGELYRLTSLDVSYNQLISLPPEIQFLINLDSLTLSNNQLATLPPEIGFLSNLI 249

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L+L  N LT IP   G L +L    LS N++E+LP  I  L  L SL+L NN+L  LP 
Sbjct: 250 SLNLSYNQLTSIPPEIGQLTKLIQFRLSHNKIETLPPEIRCLTQLTSLMLKNNQLLALPL 309

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLK 268
           E+I L     KL  L +  N L T+P EII  K
Sbjct: 310 ELIQLVQFF-KLTQLDVQEN-LLTIPPEIIWRK 340



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 45/106 (42%), Positives = 51/106 (48%), Gaps = 4/106 (3%)

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           K   L L    L  +P     L  L  L L +N+L +LP  I  LK L SL L +N+L  
Sbjct: 17  KAETLDLSFKKLETLPPQIEQLTHLRYLDLRNNKLTTLPPQIGKLKKLTSLNLTDNQLSA 76

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           LP EI  L  LS     L L  NKL  LP EI  L  LSEL L  N
Sbjct: 77  LPPEIGQLNNLSR----LHLSYNKLTNLPEEIGQLTHLSELYLSHN 118


>gi|418739213|ref|ZP_13295601.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|410753465|gb|EKR10430.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 281

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 92/226 (40%), Positives = 122/226 (53%), Gaps = 7/226 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLL 113
           P ++ TL L  N L+  P    K   L SLDLSNN++  LP+ I     L  L   +N L
Sbjct: 36  PMDVRTLDLSKNQLTTLPKEIEKLKELESLDLSNNQLVTLPKEIGKLQKLRYLYLDHNQL 95

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +LPK++  LK+L+  +L  NQL   P +I  +  L+ L L +N L  +P+EI  L K
Sbjct: 96  T--TLPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKKLQVLDLNDNQLTTIPKEIGYLKK 153

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P   G L +L  L L  NQL +LP  I  L+ L  L L  N+L TL
Sbjct: 154 LQELYLINNQLTTLPKEIGYLEELWLLDLRKNQLTTLPKEIGYLEELWLLDLRKNQLTTL 213

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           P EI  L    +KL+ L L NN+  T P EI  L+ L+ L+L D P
Sbjct: 214 PKEIGKL----QKLEKLYLKNNQFTTFPKEIGKLQKLNTLNLDDIP 255



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 122/224 (54%), Gaps = 14/224 (6%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           + ++TLD S + L   TL  +IE         K + +++L L +N L   P    K   L
Sbjct: 37  MDVRTLDLSKNQLT--TLPKEIE---------KLKELESLDLSNNQLVTLPKEIGKLQKL 85

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           R L L +N++T LP+ I     L +L  RNN LT  +LPK++  LK L+V +L+ NQL  
Sbjct: 86  RYLYLDHNQLTTLPKEIEYLKDLESLDLRNNQLT--TLPKEIEYLKKLQVLDLNDNQLTT 143

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +I  +  L+ LYL NN L  +P+EI  L +L +L L  N LT +P   G L +L  L
Sbjct: 144 IPKEIGYLKKLQELYLINNQLTTLPKEIGYLEELWLLDLRKNQLTTLPKEIGYLEELWLL 203

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
            L  NQL +LP  I  L+ L+ L L NN+  T P EI  L+ L+
Sbjct: 204 DLRKNQLTTLPKEIGKLQKLEKLYLKNNQFTTFPKEIGKLQKLN 247



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 80/202 (39%), Positives = 107/202 (52%), Gaps = 28/202 (13%)

Query: 80  NLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
           ++R+LDLS N++T                        +LPK++  LK L+  +LS NQL 
Sbjct: 38  DVRTLDLSKNQLT------------------------TLPKEIEKLKELESLDLSNNQLV 73

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
             P +I  +  L+YLYL +N L  +P+EI  L  L  L L  N LT +P     L +L+ 
Sbjct: 74  TLPKEIGKLQKLRYLYLDHNQLTTLPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKKLQV 133

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRT 259
           L L+DNQL ++P  I  LK L+ L L NN+L TLP EI  L    E+L  L L  N+L T
Sbjct: 134 LDLNDNQLTTIPKEIGYLKKLQELYLINNQLTTLPKEIGYL----EELWLLDLRKNQLTT 189

Query: 260 LPTEIITLKCLSELSLRDNPLV 281
           LP EI  L+ L  L LR N L 
Sbjct: 190 LPKEIGYLEELWLLDLRKNQLT 211


>gi|428306331|ref|YP_007143156.1| small GTP-binding protein [Crinalium epipsammum PCC 9333]
 gi|428247866|gb|AFZ13646.1| small GTP-binding protein [Crinalium epipsammum PCC 9333]
          Length = 1011

 Score =  119 bits (299), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 85/232 (36%), Positives = 123/232 (53%), Gaps = 7/232 (3%)

Query: 50  DYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIA 108
           D   K  N+  L L +N ++  P+  +K TNL  L L NN+IT +P+AI     L+  I 
Sbjct: 120 DAIAKLTNLTQLDLSNNQITQIPEAIAKLTNLTQLVLFNNQITQIPEAIAKLTNLTQFIL 179

Query: 109 RNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREI 168
            NN +T   +P+ ++NL NL    LS NQ+ Q P  I ++  L  L L NN +  +P  I
Sbjct: 180 SNNQIT--QIPEAIANLTNLTQLILSNNQITQIPEAIANLTNLTQLDLLNNKITQIPEAI 237

Query: 169 NKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
             L  L  L L  N +T IP+    L  L  LILSDN++  +P +I+ L  L  L LH+N
Sbjct: 238 ANLINLTQLDLLNNKITQIPEAIAKLTNLTQLILSDNKITQIPEAIAKLTNLTQLDLHSN 297

Query: 229 KLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           K+  +P  I  L  L++    L L +NK+  +P  I  L  L++L L DN +
Sbjct: 298 KITQIPEAIAKLTNLTQ----LDLRSNKITQIPEAIAKLTNLTQLDLSDNSI 345



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/216 (36%), Positives = 108/216 (50%), Gaps = 7/216 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTAESLPKDMSN 124
           NNL   P       NLR LD+S N +  +P  +T    L  LI     LT   +P  ++ 
Sbjct: 67  NNLKTLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVKLT--EIPDAIAK 124

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L NL   +LS NQ+ Q P  I  +  L  L L NN +  +P  I KL  L    L  N +
Sbjct: 125 LTNLTQLDLSNNQITQIPEAIAKLTNLTQLVLFNNQITQIPEAIAKLTNLTQFILSNNQI 184

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T IP+   +L  L  LILS+NQ+  +P +I+NL  L  L L NNK+  +P  I  L  L+
Sbjct: 185 TQIPEAIANLTNLTQLILSNNQITQIPEAIANLTNLTQLDLLNNKITQIPEAIANLINLT 244

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +    L L NNK+  +P  I  L  L++L L DN +
Sbjct: 245 Q----LDLLNNKITQIPEAIAKLTNLTQLILSDNKI 276



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/233 (31%), Positives = 110/233 (47%), Gaps = 28/233 (12%)

Query: 46  LPNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN   + PE      N+  L+L++N ++  P+  +K TNL    LSNN+IT +P+AI 
Sbjct: 133 LSNNQITQIPEAIAKLTNLTQLVLFNNQITQIPEAIAKLTNLTQFILSNNQITQIPEAIA 192

Query: 100 NFP-LSTLIARNNLLTA---------------------ESLPKDMSNLKNLKVFNLSGNQ 137
           N   L+ LI  NN +T                        +P+ ++NL NL   +L  N+
Sbjct: 193 NLTNLTQLILSNNQITQIPEAIANLTNLTQLDLLNNKITQIPEAIANLINLTQLDLLNNK 252

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           + Q P  I  +  L  L L +N +  +P  I KL  L  L L  N +T IP+    L  L
Sbjct: 253 ITQIPEAIAKLTNLTQLILSDNKITQIPEAIAKLTNLTQLDLHSNKITQIPEAIAKLTNL 312

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
             L L  N++  +P +I+ L  L  L L +N +  +P E++  K   E L  L
Sbjct: 313 TQLDLRSNKITQIPEAIAKLTNLTQLDLSDNSITNIPLEMLNSKDAKEILNYL 365



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 12/202 (5%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
             R LDLS   +T LP  I     L +LI    +   E +        +  +  +SGN L
Sbjct: 17  GWRELDLSGQELTELPGEIGKLQQLESLILGKKIEAYEFV-------GDRYLEKVSGNNL 69

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
           +  P+++L +P L+ L +  N L  +P  + ++  L  L L    LT+IPD    L  L 
Sbjct: 70  KTLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVKLTEIPDAIAKLTNLT 129

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L LS+NQ+  +P +I+ L  L  L+L NN++  +P  I  L  L++     +L NN++ 
Sbjct: 130 QLDLSNNQITQIPEAIAKLTNLTQLVLFNNQITQIPEAIAKLTNLTQ----FILSNNQIT 185

Query: 259 TLPTEIITLKCLSELSLRDNPL 280
            +P  I  L  L++L L +N +
Sbjct: 186 QIPEAIANLTNLTQLILSNNQI 207


>gi|418680750|ref|ZP_13241991.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|421115503|ref|ZP_15575909.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|400327539|gb|EJO79787.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|410012987|gb|EKO71072.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|455667923|gb|EMF33190.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 288

 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/215 (40%), Positives = 115/215 (53%), Gaps = 7/215 (3%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
            N L   P       NL+ L LS N IT LP  I N   L  L    N L  E++PK++ 
Sbjct: 59  ENPLKTLPKEIGNLQNLKKLYLSANEITTLPPEIGNLKNLQVLSLNGNKL--ETIPKEIG 116

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           NLK LK  ++  N+L+  P +I ++  LK LYL  N L  +P+EI  L KL  + L  N 
Sbjct: 117 NLKKLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRMHLSTNE 176

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT +P    +L  L  + L DNQ  +LP  I NLK L++L+L  N+L +L  EI  LK  
Sbjct: 177 LTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLK-- 234

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
              LK L L  N+L  LP +I  LK L+ LSL+ N
Sbjct: 235 --NLKELYLEENQLTMLPKQIAALKQLARLSLKGN 267



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/166 (40%), Positives = 96/166 (57%), Gaps = 4/166 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++LPK++ NL+NLK   LS N++   P +I ++  L+ L L  N L  +P+EI  L KL 
Sbjct: 63  KTLPKEIGNLQNLKKLYLSANEITTLPPEIGNLKNLQVLSLNGNKLETIPKEIGNLKKLK 122

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            LS+  N L  +P   G+L  L+ L LS NQL+ LP  I NL+ L+ + L  N+L  LP 
Sbjct: 123 ELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRMHLSTNELTKLPQ 182

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           EI  L+ L E    + L++N+  TLP EI  LK L  L L  N L+
Sbjct: 183 EIKNLESLLE----IYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLI 224



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 98/192 (51%), Gaps = 7/192 (3%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A +I  LP    N K  N+  L L  N L   P        L+ L +  N++  LP+ I 
Sbjct: 82  ANEITTLPPEIGNLK--NLQVLSLNGNKLETIPKEIGNLKKLKELSIEWNKLQTLPKEIG 139

Query: 100 NFP-LSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           N   L  L ++RN L   + LP+++ NL+ L+  +LS N+L + P +I ++ +L  +YL 
Sbjct: 140 NLKNLKELYLSRNQL---KILPQEIGNLRKLQRMHLSTNELTKLPQEIKNLESLLEIYLY 196

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           +N    +P+EI  L  L  L LG N L  +    G+L  L+ L L +NQL  LP  I+ L
Sbjct: 197 DNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKNLKELYLEENQLTMLPKQIAAL 256

Query: 218 KMLKSLLLHNNK 229
           K L  L L  N+
Sbjct: 257 KQLARLSLKGNQ 268



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 49/101 (48%), Positives = 60/101 (59%), Gaps = 4/101 (3%)

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P   G+L  L+ L LS N++ +LP  I NLK L+ L L+ NKL T+P EI  LK
Sbjct: 60  NPLKTLPKEIGNLQNLKKLYLSANEITTLPPEIGNLKNLQVLSLNGNKLETIPKEIGNLK 119

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
               KLK L +  NKL+TLP EI  LK L EL L  N L I
Sbjct: 120 ----KLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKI 156



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 78/172 (45%), Gaps = 7/172 (4%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
             ++E +P    N K   +  L +  N L   P       NL+ L LS N++  LPQ I 
Sbjct: 105 GNKLETIPKEIGNLK--KLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIG 162

Query: 100 NFPLSTLIARNNLLTAE--SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           N      + R +L T E   LP+++ NL++L    L  NQ    P +I ++  L+ L LG
Sbjct: 163 NL---RKLQRMHLSTNELTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLG 219

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            N L  +  EI  L  L  L L  N LT +P     L QL  L L  NQ  S
Sbjct: 220 RNQLISLLPEIGNLKNLKELYLEENQLTMLPKQIAALKQLARLSLKGNQFPS 271


>gi|344281680|ref|XP_003412606.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Loxodonta africana]
          Length = 1050

 Score =  119 bits (298), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/217 (36%), Positives = 117/217 (53%), Gaps = 7/217 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSN 124
           N L+  PD+ S    LR+LD+ +N++T  PQ +     L  L   +N L    LP+D+S 
Sbjct: 168 NRLAHLPDSLSCLHRLRTLDVDHNQLTAFPQQLLQLVALEELDVSSNRL--RGLPEDISA 225

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ LK+  LSG +L   P    ++ +L+ L L NN L  +P + ++L KL +L+L  N  
Sbjct: 226 LRALKILWLSGAELGTLPSSFCELASLESLMLDNNGLQALPAQFSRLQKLKMLNLSSNLF 285

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
            + P     L  LE L LS NQL S+P+ IS L  L +L L NN++R LP  I+ L  L 
Sbjct: 286 EEFPAALLPLAGLEELYLSRNQLTSVPSLISGLSRLLTLWLDNNRIRYLPDSIVELTGLE 345

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           E    L+L  N++  LP     L  +    ++DNPL+
Sbjct: 346 E----LVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLI 378



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 112/225 (49%), Gaps = 8/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +I+ L L +N L   P    S   +LR L L  NR   LP A+      L+ L   +N L
Sbjct: 64  DIEVLNLGNNGLEEVPHGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 123

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA    + +S L+ L+  NLS NQL   P Q+  +  L+ L +  N L H+P  ++ L +
Sbjct: 124 TALG-AEVVSALRELRKLNLSHNQLPSLPAQLGALAHLEELDVSFNRLAHLPDSLSCLHR 182

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L +  N LT  P     L  LE L +S N+L  LP  IS L+ LK L L   +L TL
Sbjct: 183 LRTLDVDHNQLTAFPQQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 242

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P+      C    L+SL+L NN L+ LP +   L+ L  L+L  N
Sbjct: 243 PSSF----CELASLESLMLDNNGLQALPAQFSRLQKLKMLNLSSN 283



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 96/205 (46%), Gaps = 26/205 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF--------------- 101
            + TL + HN L+ FP    +   L  LD+S+NR+  LP+ I+                 
Sbjct: 182 RLRTLDVDHNQLTAFPQQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGT 241

Query: 102 ---------PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                     L +L+  NN L A  LP   S L+ LK+ NLS N  E+FP  +L +  L+
Sbjct: 242 LPSSFCELASLESLMLDNNGLQA--LPAQFSRLQKLKMLNLSSNLFEEFPAALLPLAGLE 299

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYL  N L  VP  I+ L +L  L L  N +  +PD+  +L  LE L+L  NQ+  LP 
Sbjct: 300 ELYLSRNQLTSVPSLISGLSRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPD 359

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEI 237
           +   L  +    + +N L   P E+
Sbjct: 360 NFGQLSRVGLWKIKDNPLIQPPYEV 384



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 75/162 (46%), Gaps = 25/162 (15%)

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREIN-KLCKLHVLSLGGNSLTDIPDTFGDL-YQLE 198
            P  I DI  L    LGNN L  VP  +   L  L VL L  N    +P    +L + L 
Sbjct: 58  LPANIGDIEVLN---LGNNGLEEVPHGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLT 114

Query: 199 ALILSDNQLESLPAS-ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE------------ 245
            L +S N+L +L A  +S L+ L+ L L +N+L +LP ++  L  L E            
Sbjct: 115 ELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPSLPAQLGALAHLEELDVSFNRLAHLP 174

Query: 246 -------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
                  +L++L + +N+L   P +++ L  L EL +  N L
Sbjct: 175 DSLSCLHRLRTLDVDHNQLTAFPQQLLQLVALEELDVSSNRL 216


>gi|256396794|ref|YP_003118358.1| phosphoprotein phosphatase [Catenulispora acidiphila DSM 44928]
 gi|256363020|gb|ACU76517.1| Phosphoprotein phosphatase [Catenulispora acidiphila DSM 44928]
          Length = 1263

 Score =  119 bits (298), Expect = 2e-24,   Method: Composition-based stats.
 Identities = 82/235 (34%), Positives = 116/235 (49%), Gaps = 22/235 (9%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L+  P +      L+ L L+ NR+  LP +I +   L+ L  + N L  ++LP  + N
Sbjct: 194 NVLTELPPSIGALIRLQELSLTGNRLRKLPTSIGDMASLTKLYLQKNQL--QTLPASIGN 251

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L  L+   LSGN LE+ P  + D+  L  L L +N L HVP  I +L  L  LSL  N L
Sbjct: 252 LSELQTLALSGNHLEELPASVADLSRLTELNLADNWLTHVPEAIGRLASLDKLSLTYNRL 311

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T++P + G L  L AL +S N L  LP S   L  L +L L  N L +LP+ +  LK L+
Sbjct: 312 TELPPSLGALRVLTALDVSRNSLHDLPDSFDGLANLDTLNLAQNPLTSLPSSVGALKRLT 371

Query: 245 -------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
                               +L++L L  N LR LP ++  L  L+ L+L  N L
Sbjct: 372 WLSLAYCDLETLPAGLGGLHRLETLDLVGNNLRDLPFQLSGLGALTTLNLASNQL 426



 Score =  110 bits (275), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 92/261 (35%), Positives = 123/261 (47%), Gaps = 19/261 (7%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L+  P+  ++   L SL L  N  T LP+ + +   L+ L  + N L    LP
Sbjct: 98  LSLTGNGLTTLPEEFARLERLTSLWLDENAFTALPEVVGHLSSLTQLYLQKNQLPG--LP 155

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            D     +L    L GN L + P  I D  +L  L   +N L  +P  I  L +L  LSL
Sbjct: 156 -DSLGAPSLHTLVLDGNHLAELPDWIGDTQSLVALSADDNVLTELPPSIGALIRLQELSL 214

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
            GN L  +P + GD+  L  L L  NQL++LPASI NL  L++L L  N L  LP  +  
Sbjct: 215 TGNRLRKLPTSIGDMASLTKLYLQKNQLQTLPASIGNLSELQTLALSGNHLEELPASVAD 274

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELA 299
           L  L+E    L L +N L  +P  I  L  L +LSL  N L        T  PPSL  L 
Sbjct: 275 LSRLTE----LNLADNWLTHVPEAIGRLASLDKLSLTYNRL--------TELPPSLGAL- 321

Query: 300 SRTLKVHEIDYSQEH-LPQNL 319
            R L   ++  +  H LP + 
Sbjct: 322 -RVLTALDVSRNSLHDLPDSF 341



 Score =  107 bits (266), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 77/248 (31%), Positives = 115/248 (46%), Gaps = 29/248 (11%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI-------- 107
           E + +L L  N  +  P+     ++L  L L  N++  LP ++    L TL+        
Sbjct: 116 ERLTSLWLDENAFTALPEVVGHLSSLTQLYLQKNQLPGLPDSLGAPSLHTLVLDGNHLAE 175

Query: 108 ---------------ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                          A +N+LT   LP  +  L  L+  +L+GN+L + P  I D+ +L 
Sbjct: 176 LPDWIGDTQSLVALSADDNVLT--ELPPSIGALIRLQELSLTGNRLRKLPTSIGDMASLT 233

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYL  N L  +P  I  L +L  L+L GN L ++P +  DL +L  L L+DN L  +P 
Sbjct: 234 KLYLQKNQLQTLPASIGNLSELQTLALSGNHLEELPASVADLSRLTELNLADNWLTHVPE 293

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSE 272
           +I  L  L  L L  N+L  LP  +  L+ L+    +L +  N L  LP     L  L  
Sbjct: 294 AIGRLASLDKLSLTYNRLTELPPSLGALRVLT----ALDVSRNSLHDLPDSFDGLANLDT 349

Query: 273 LSLRDNPL 280
           L+L  NPL
Sbjct: 350 LNLAQNPL 357



 Score =  102 bits (253), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 86/288 (29%), Positives = 128/288 (44%), Gaps = 57/288 (19%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI--- 98
           Q++ LP +  N     + TL L  N+L   P + +  + L  L+L++N +TH+P+AI   
Sbjct: 241 QLQTLPASIGNL--SELQTLALSGNHLEELPASVADLSRLTELNLADNWLTHVPEAIGRL 298

Query: 99  -------------TNFP--------LSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGN 136
                        T  P        L+ L ++RN+L     LP     L NL   NL+ N
Sbjct: 299 ASLDKLSLTYNRLTELPPSLGALRVLTALDVSRNSL---HDLPDSFDGLANLDTLNLAQN 355

Query: 137 QLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD---------- 186
            L   P  +  +  L +L L    L  +P  +  L +L  L L GN+L D          
Sbjct: 356 PLTSLPSSVGALKRLTWLSLAYCDLETLPAGLGGLHRLETLDLVGNNLRDLPFQLSGLGA 415

Query: 187 -------------IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
                        +P T G L  L  L L+DN+L SLP ++  L+ L+ L +  N+L  +
Sbjct: 416 LTTLNLASNQLSWVPRTLGLLRNLVNLDLADNELSSLPRALGGLESLRKLDVAENQLTWI 475

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P  +    C   KL++L+L  N+L  LPT       L EL L DNPL+
Sbjct: 476 PRSV----CDLPKLETLVLRGNRLADLPTSNWQKLTLKELDLSDNPLL 519



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 66/212 (31%), Positives = 93/212 (43%), Gaps = 34/212 (16%)

Query: 84  LDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPI 143
           LDLSN  +T LP      P                      L  +   NLSGN+L   P 
Sbjct: 26  LDLSNLGLTGLPAEFGRLP---------------------ELGPVTFLNLSGNRLATLPE 64

Query: 144 QILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILS 203
            + ++  L+ L+L +N    +P ++  L  L  LSL GN LT +P+ F  L +L +L L 
Sbjct: 65  TLGEVTGLRRLWLDSNGFGELPPQVALLGGLVELSLTGNGLTTLPEEFARLERLTSLWLD 124

Query: 204 DNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTE 263
           +N   +LP  + +L  L  L L  N+L  LP  +      +  L +L+L  N L  LP  
Sbjct: 125 ENAFTALPEVVGHLSSLTQLYLQKNQLPGLPDSL-----GAPSLHTLVLDGNHLAELPDW 179

Query: 264 IITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
           I   + L  LS  DN L        T  PPS+
Sbjct: 180 IGDTQSLVALSADDNVL--------TELPPSI 203



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Composition-based stats.
 Identities = 48/150 (32%), Positives = 74/150 (49%), Gaps = 3/150 (2%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L + +L   P        L +LDL  N +  LP  ++    L+TL   +N L+   +P
Sbjct: 373 LSLAYCDLETLPAGLGGLHRLETLDLVGNNLRDLPFQLSGLGALTTLNLASNQLSW--VP 430

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
           + +  L+NL   +L+ N+L   P  +  + +L+ L +  N L  +PR +  L KL  L L
Sbjct: 431 RTLGLLRNLVNLDLADNELSSLPRALGGLESLRKLDVAENQLTWIPRSVCDLPKLETLVL 490

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            GN L D+P +      L+ L LSDN L S
Sbjct: 491 RGNRLADLPTSNWQKLTLKELDLSDNPLLS 520


>gi|260788644|ref|XP_002589359.1| hypothetical protein BRAFLDRAFT_77808 [Branchiostoma floridae]
 gi|229274536|gb|EEN45370.1| hypothetical protein BRAFLDRAFT_77808 [Branchiostoma floridae]
          Length = 862

 Score =  119 bits (298), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 122/222 (54%), Gaps = 7/222 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L + +N LS FP    K   LR L ++ N++T +P  + + P L  L   NN L+ 
Sbjct: 106 NLEVLSVGNNKLSTFPPGVEKLQKLRELYINGNQLTEVPSGVCSLPNLEVLGVSNNNLS- 164

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            + P  +  L+ L+   + GNQL + P  +  +P L+ L + NN+L+  P  + KL KL 
Sbjct: 165 -TFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLGVSNNNLSTFPPGVEKLQKLR 223

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L + GN LT++P     L  LE L +S+N+L + P  +  L+ L+ L +++N+L  +PT
Sbjct: 224 ELYIYGNQLTEVPSGVCSLPNLEVLSVSNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPT 283

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRD 277
            + +L      L+ L + NN +R LP +++ LK L +L   D
Sbjct: 284 GVCSLP----DLEWLSVGNNPIRRLPRQVLQLKTLEKLYAGD 321



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 126/248 (50%), Gaps = 15/248 (6%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L + +NNLS FP    K   LR L +  N++T +P  + + P L  L   NN L+ 
Sbjct: 198 NLEVLGVSNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLSVSNNKLS- 256

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            + P  +  L+ L+   +  NQL + P  +  +P L++L +GNN +  +PR++ +L  L 
Sbjct: 257 -TFPPGVEKLQKLRELYIYDNQLTEVPTGVCSLPDLEWLSVGNNPIRRLPRQVLQLKTLE 315

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L  G      +PD  G+L  L  L L  N L++LP+++ +L  L+ + L +NK  T P 
Sbjct: 316 KLYAGDCKFDMVPDEVGNLQHLWFLALEYNLLKTLPSTMRHLHNLREVRLWSNKFDTFP- 374

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
           E++   C    ++ L++ NN +  LPT +     L +L +  NPL        TY P  +
Sbjct: 375 EVL---CELPAMEKLVIRNNNITRLPTALHRADKLKDLDVSGNPL--------TYPPQDV 423

Query: 296 LELASRTL 303
            E  +  +
Sbjct: 424 CEQGTGAI 431



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 76/230 (33%), Positives = 123/230 (53%), Gaps = 10/230 (4%)

Query: 55  PENIDTLL---LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARN 110
           P+ ++ LL   L +  L+  P+     T+L  LD+S+N +T +P+AI     L  L A +
Sbjct: 9   PQTVNGLLTLDLSNQGLTSIPEEVFDITDLEDLDVSDNNLTSIPEAIGRLQKLYRLDAYS 68

Query: 111 NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
           N+LT   LP+ + +L+ L    +  NQL + P  +  +P L+ L +GNN L+  P  + K
Sbjct: 69  NMLT--RLPQAIGSLQKLTHLYIYDNQLTEMPSGVCSLPNLEVLSVGNNKLSTFPPGVEK 126

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L KL  L + GN LT++P     L  LE L +S+N L + P  +  L+ L+ L ++ N+L
Sbjct: 127 LQKLRELYINGNQLTEVPSGVCSLPNLEVLGVSNNNLSTFPPGVEKLQKLRELYIYGNQL 186

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             +P+ + +L      L+ L + NN L T P  +  L+ L EL +  N L
Sbjct: 187 TEVPSGVCSLP----NLEVLGVSNNNLSTFPPGVEKLQKLRELYIYGNQL 232


>gi|417763567|ref|ZP_12411544.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417773413|ref|ZP_12421293.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418674344|ref|ZP_13235651.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409940386|gb|EKN86026.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410576802|gb|EKQ39804.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410578764|gb|EKQ46618.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 280

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 91/224 (40%), Positives = 125/224 (55%), Gaps = 24/224 (10%)

Query: 79  TNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGN 136
           T++++LDLSNN++  LP+ I     L  L ++RN L   ++LPK++  L+ L+   LS N
Sbjct: 37  TDVQTLDLSNNQLITLPKEIGQLKELEWLSLSRNQL---KTLPKEIEQLQKLRYLYLSDN 93

Query: 137 QLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQ 196
           QL   P +I  +  L+ L L  N L  +P+EI  L KL  L+L  N LT +P   G L +
Sbjct: 94  QLTTLPKEIGYLKELQELDLSRNQLTTLPKEIETLKKLESLNLINNQLTTLPKEIGQLKE 153

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS------------ 244
           L+ L LS+NQL +LP  I  LK L+ L L NN+L TLP  I+ LK L             
Sbjct: 154 LQVLDLSNNQLTTLPNEIEFLKRLQELYLKNNQLTTLPKGIVYLKELWLLDLSFNQLTAL 213

Query: 245 -------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                  +KL+ L L  N+L TLP EI TLK L EL L D P++
Sbjct: 214 SKEIGYLKKLQKLDLSRNQLTTLPKEIETLKKLEELFLDDIPVL 257



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/166 (44%), Positives = 99/166 (59%), Gaps = 4/166 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++L K + N  +++  +LS NQL   P +I  +  L++L L  N L  +P+EI +L KL 
Sbjct: 27  QNLTKALKNPTDVQTLDLSNNQLITLPKEIGQLKELEWLSLSRNQLKTLPKEIEQLQKLR 86

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +P   G L +L+ L LS NQL +LP  I  LK L+SL L NN+L TLP 
Sbjct: 87  YLYLSDNQLTTLPKEIGYLKELQELDLSRNQLTTLPKEIETLKKLESLNLINNQLTTLPK 146

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           EI  LK    +L+ L L NN+L TLP EI  LK L EL L++N L 
Sbjct: 147 EIGQLK----ELQVLDLSNNQLTTLPNEIEFLKRLQELYLKNNQLT 188



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 78/192 (40%), Positives = 101/192 (52%), Gaps = 5/192 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLL 113
           + ++ L L  N L   P    +   LR L LS+N++T LP+ I     L  L ++RN L 
Sbjct: 60  KELEWLSLSRNQLKTLPKEIEQLQKLRYLYLSDNQLTTLPKEIGYLKELQELDLSRNQLT 119

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++  LK L+  NL  NQL   P +I  +  L+ L L NN L  +P EI  L +
Sbjct: 120 T---LPKEIETLKKLESLNLINNQLTTLPKEIGQLKELQVLDLSNNQLTTLPNEIEFLKR 176

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P     L +L  L LS NQL +L   I  LK L+ L L  N+L TL
Sbjct: 177 LQELYLKNNQLTTLPKGIVYLKELWLLDLSFNQLTALSKEIGYLKKLQKLDLSRNQLTTL 236

Query: 234 PTEIITLKCLSE 245
           P EI TLK L E
Sbjct: 237 PKEIETLKKLEE 248



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 68/168 (40%), Positives = 92/168 (54%), Gaps = 3/168 (1%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L+  P        L+ LDLS N++T LP+ I     L +L   NN LT  +LP
Sbjct: 88  LYLSDNQLTTLPKEIGYLKELQELDLSRNQLTTLPKEIETLKKLESLNLINNQLT--TLP 145

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
           K++  LK L+V +LS NQL   P +I  +  L+ LYL NN L  +P+ I  L +L +L L
Sbjct: 146 KEIGQLKELQVLDLSNNQLTTLPNEIEFLKRLQELYLKNNQLTTLPKGIVYLKELWLLDL 205

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
             N LT +    G L +L+ L LS NQL +LP  I  LK L+ L L +
Sbjct: 206 SFNQLTALSKEIGYLKKLQKLDLSRNQLTTLPKEIETLKKLEELFLDD 253


>gi|358419356|ref|XP_003584212.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1-like
           [Bos taurus]
          Length = 1052

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 137/269 (50%), Gaps = 20/269 (7%)

Query: 27  LDFSY---SSLDSETLATQIEL----LPNNDYNKKPENIDTLL------LYHNNLSFFPD 73
           LD S+   S L +E +    EL    L +N     P  +  L+      +  N L+  PD
Sbjct: 114 LDVSHNRLSVLGAEAVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAHLPD 173

Query: 74  NASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFN 132
           + +  + LR+LD+ +N++T  P+ +     L  L   +N L    LP+D+S L+ LK+  
Sbjct: 174 SFAGLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRL--RGLPEDISALRALKILW 231

Query: 133 LSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFG 192
           LSG +L   P    ++ +L+ L L NN L  +P + ++L +L +L+L  N L + P    
Sbjct: 232 LSGAELGTLPSGFCELASLESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLLEEFPAALL 291

Query: 193 DLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLL 252
            L  LE L LS NQL S+P  IS L  L +L L NN++R LP  I+ L  L E    L+L
Sbjct: 292 PLAGLEELYLSRNQLTSVPCLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEE----LVL 347

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             N++  LP     L  +    ++DNPL+
Sbjct: 348 QGNQIAVLPDNFGQLSRVGLWKIKDNPLI 376



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 114/253 (45%), Gaps = 37/253 (14%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNN-- 111
           +I+ L L +N L   PD   S   +LR L L  NR   LPQA+      L+ L   +N  
Sbjct: 62  DIEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFAQLPQAVAELGHHLTELDVSHNRL 121

Query: 112 -LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
            +L AE+    +  L+ L+  NLS NQL   P Q+  +  L+ L +  N L H+P     
Sbjct: 122 SVLGAEA----VGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAHLPDSFAG 177

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK--------- 221
           L +L  L +  N LT  P     L  LE L +S N+L  LP  IS L+ LK         
Sbjct: 178 LSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAEL 237

Query: 222 --------------SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITL 267
                         SL+L NN LR LP +   L    ++LK L L +N L   P  ++ L
Sbjct: 238 GTLPSGFCELASLESLMLDNNGLRALPAQFSRL----QRLKMLNLSSNLLEEFPAALLPL 293

Query: 268 KCLSELSLRDNPL 280
             L EL L  N L
Sbjct: 294 AGLEELYLSRNQL 306



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 97/205 (47%), Gaps = 26/205 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF--------------- 101
            + TL + HN L+ FP    +   L  LD+S+NR+  LP+ I+                 
Sbjct: 180 RLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGT 239

Query: 102 ---------PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                     L +L+  NN L A  LP   S L+ LK+ NLS N LE+FP  +L +  L+
Sbjct: 240 LPSGFCELASLESLMLDNNGLRA--LPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLE 297

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYL  N L  VP  I+ L +L  L L  N +  +PD+  +L  LE L+L  NQ+  LP 
Sbjct: 298 ELYLSRNQLTSVPCLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPD 357

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEI 237
           +   L  +    + +N L   P E+
Sbjct: 358 NFGQLSRVGLWKIKDNPLIQPPYEV 382



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 88/208 (42%), Gaps = 41/208 (19%)

Query: 107 IARNNLLTAESLPKDMSNLKNLKVFNLSG----NQLEQFPIQILDIPT----LKYLYLGN 158
           + R+  L A  L    SNL+ L + +  G    +QL+      L +P     ++ L LGN
Sbjct: 14  LWRDATLRARKL---RSNLRQLTLSSAGGCPXTDQLDSPDAPQLXLPANIGDIEVLNLGN 70

Query: 159 NSLNHVPREIN-KLCKLHVLSLGGNSLTDIP-------------------------DTFG 192
           N L  VP  +   L  L VL L  N    +P                         +  G
Sbjct: 71  NGLEEVPDGLGSALGSLRVLVLRRNRFAQLPQAVAELGHHLTELDVSHNRLSVLGAEAVG 130

Query: 193 DLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLL 252
            L +L  L LS NQL +LPA +  L  L+ L +  N+L  LP     L     +L++L +
Sbjct: 131 ALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAHLPDSFAGLS----RLRTLDV 186

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +N+L   P +++ L  L EL +  N L
Sbjct: 187 DHNQLTAFPRQLLQLVALEELDVSSNRL 214


>gi|418701702|ref|ZP_13262624.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759266|gb|EKR25481.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 287

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/229 (38%), Positives = 124/229 (54%), Gaps = 7/229 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K P ++  L L    L+  P    +  NL+SLDL+NN+   LP+ I     L  L   NN
Sbjct: 45  KNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNN 104

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            L  ++LPK++  L++L+  NL  N+L+  P +I  +  L+ LYL NN L  +P EI +L
Sbjct: 105 QL--KNLPKEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQL 162

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L LG N LT +P   G L  L+ L   +N+L  LP  I  L+ L+ L L +N+L 
Sbjct: 163 KNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLT 222

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           TLP EI  LK     L++ +  NN+L  LP EI  L+ L  L L +N L
Sbjct: 223 TLPKEIGQLK----NLQTFISFNNQLTMLPNEIGQLQNLQWLKLNNNQL 267



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 68/165 (41%), Positives = 95/165 (57%), Gaps = 4/165 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++  L+NLK  +L+ NQ +  P +I  +  L+ L L NN L ++P+EI +L  L  
Sbjct: 62  TLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQNLQELNLWNNQLKNLPKEIGQLQSLQK 121

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+L  N L  +P+  G L  L+ L LS+NQL  LP  I  LK L++L+L +N+L  LP E
Sbjct: 122 LNLDKNRLKALPNEIGQLQNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKE 181

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I  L    + LK L   NN+L  LP EI  L+ L  L L  N L 
Sbjct: 182 IGQL----QNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLT 222



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/169 (38%), Positives = 92/169 (54%), Gaps = 4/169 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLS  +L   P +I  +  LK L L NN    +P+EI +L  
Sbjct: 36  TYRDLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFKTLPKEIGQLQN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N L ++P   G L  L+ L L  N+L++LP  I  L+ L+ L L NN+L  L
Sbjct: 96  LQELNLWNNQLKNLPKEIGQLQSLQKLNLDKNRLKALPNEIGQLQNLQELYLSNNQLTIL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK     L++L+L +N+L  LP EI  L+ L  L   +N L I
Sbjct: 156 PEEIGQLK----NLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTI 200



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/131 (34%), Positives = 69/131 (52%), Gaps = 3/131 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L +N L+  P+   +  NL++L L +N++T LP+ I     L  L + NN LT
Sbjct: 140 QNLQELYLSNNQLTILPEEIGQLKNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELT 199

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP+++  L+ L+   LS NQL   P +I  +  L+     NN L  +P EI +L  L
Sbjct: 200 I--LPQEIGQLQKLQYLYLSHNQLTTLPKEIGQLKNLQTFISFNNQLTMLPNEIGQLQNL 257

Query: 175 HVLSLGGNSLT 185
             L L  N L+
Sbjct: 258 QWLKLNNNQLS 268



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 65/125 (52%), Gaps = 7/125 (5%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N+  L+L  N L+  P    +  NL+ L   NN +T LPQ I     L  L   +N LT
Sbjct: 163 KNLQALILGDNQLTILPKEIGQLQNLKLLYSVNNELTILPQEIGQLQKLQYLYLSHNQLT 222

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INKL-- 171
             +LPK++  LKNL+ F    NQL   P +I  +  L++L L NN L+    E I KL  
Sbjct: 223 --TLPKEIGQLKNLQTFISFNNQLTMLPNEIGQLQNLQWLKLNNNQLSFQEEERIRKLLP 280

Query: 172 -CKLH 175
            C+++
Sbjct: 281 KCQIY 285



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 58/109 (53%), Gaps = 4/109 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+     +   +  L LS  +L +LP  I  L+ LKSL L NN+ +
Sbjct: 25  CEIQAEKIKPGTYRDLTKALKNPLDVRVLNLSSQKLTTLPKEIKQLQNLKSLDLANNQFK 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           TLP EI  L+ L E    L L NN+L+ LP EI  L+ L +L+L  N L
Sbjct: 85  TLPKEIGQLQNLQE----LNLWNNQLKNLPKEIGQLQSLQKLNLDKNRL 129


>gi|254424572|ref|ZP_05038290.1| Miro-like protein [Synechococcus sp. PCC 7335]
 gi|196192061|gb|EDX87025.1| Miro-like protein [Synechococcus sp. PCC 7335]
          Length = 1260

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 130/225 (57%), Gaps = 6/225 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           +++ +L L  N LS  P+   +  +L SLDLS+N+++ LP+ +    L++L  R+N L+ 
Sbjct: 117 QSLTSLYLRSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQQSLTSLNLRSNQLS- 175

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LP+ +  L++L   +LS NQL   P  +  + +L  L L  N L+ +P  + +L  L 
Sbjct: 176 -TLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLSFNQLSTLPEVVGQLQSLT 234

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L+L  N L+ +P+  G L  L +L LS NQL +LP  +  L+ L SL L +N+L TLP 
Sbjct: 235 SLNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPE 294

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +  L+ L+    SL L +N+L TLP  +  L+ L+ L+LR N L
Sbjct: 295 AVGQLQSLT----SLDLSSNQLSTLPEVVGQLQSLTSLNLRSNQL 335



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 129/226 (57%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +++ +L L  N LS  P+   +  +L SL L +N+++ LP+A+     L++L   +N L+
Sbjct: 254 QSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLS 313

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+ +  L++L   NL  NQL   P  +  + +L  LYL +N L+ +P  + +L  L
Sbjct: 314 --TLPEVVGQLQSLTSLNLRSNQLSTLPEVVGQLQSLTSLYLSSNQLSTLPEAVGQLQSL 371

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N L+ +P+  G L  L +L LS NQL +LP  +  L+ L SL L +N+L TLP
Sbjct: 372 TSLNLSSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLP 431

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             +  L+ L+    SL L +N+L TLP  +  L+ L+ L+LR N L
Sbjct: 432 EAVGQLQSLT----SLDLSSNQLSTLPEVVGQLQSLTSLNLRSNQL 473



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/228 (35%), Positives = 124/228 (54%), Gaps = 7/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +++ +L L  N LS  P+   +  +L SLDLS+N+++ LP+ +     L++L  R+N L+
Sbjct: 415 QSLTSLYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLNLRSNQLS 474

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+ +  L++L   +LS NQL   P  +  + +L  L L +N L+ +P  + +L  L
Sbjct: 475 --TLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLRSNQLSTLPEVVGQLQSL 532

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L+ +P+  G L  L +L L  NQL +LP  I  L+ L SL L +N+L  LP
Sbjct: 533 TSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEVIGQLQSLTSLDLSDNQLSELP 592

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            +I    C  + L SL L  N L  LP E+  L  L +LSL    L+ 
Sbjct: 593 RQI----CQLDTLCSLFLGGNFLEQLPAELSRLLHLEKLSLGSASLIF 636



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 128/226 (56%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +++ +L L  N LS  P+   +  +L SL LS+N+++ LP+A+     L++L   +N L+
Sbjct: 323 QSLTSLNLRSNQLSTLPEVVGQLQSLTSLYLSSNQLSTLPEAVGQLQSLTSLNLSSNQLS 382

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+ +  L++L   +LS NQL   P  +  + +L  LYL +N L+ +P  + +L  L
Sbjct: 383 --TLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEAVGQLQSL 440

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L+ +P+  G L  L +L L  NQL +LP ++  L+ L SL L +N+L TLP
Sbjct: 441 TSLDLSSNQLSTLPEVVGQLQSLTSLNLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLP 500

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             +  L+ L+    SL L +N+L TLP  +  L+ L+ L L  N L
Sbjct: 501 EVVGQLQSLT----SLDLRSNQLSTLPEVVGQLQSLTSLDLSSNQL 542



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/222 (35%), Positives = 126/222 (56%), Gaps = 8/222 (3%)

Query: 60  TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESL 118
           +L L +N     P+   +   LRSL+LS+N+++ LP+ +     L++L  R+N L+  +L
Sbjct: 75  SLFLAYNQFEEIPEVVGRLRKLRSLNLSSNQLSTLPEVVGQLQSLTSLYLRSNQLS--TL 132

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P+ +  L++L   +LS NQL   P +++   +L  L L +N L+ +P  + +L  L  L 
Sbjct: 133 PEVVGQLQSLTSLDLSSNQLSTLP-EVVGQQSLTSLNLRSNQLSTLPEVVGQLQSLTSLD 191

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           L  N L+ +P+  G L  L +L LS NQL +LP  +  L+ L SL L +N+L TLP  + 
Sbjct: 192 LSSNQLSTLPEVVGQLQSLTSLDLSFNQLSTLPEVVGQLQSLTSLNLSSNQLSTLPEVVG 251

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            L+ L+    SL L +N+L TLP  +  L+ L+ L LR N L
Sbjct: 252 QLQSLT----SLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQL 289



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 122/224 (54%), Gaps = 7/224 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +++ +L L  N LS  P+   +  +L SL L +N+++ LP+A+     L++L   +N L+
Sbjct: 392 QSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEAVGQLQSLTSLDLSSNQLS 451

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+ +  L++L   NL  NQL   P  +  + +L  L L +N L+ +P  + +L  L
Sbjct: 452 --TLPEVVGQLQSLTSLNLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSL 509

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L+ +P+  G L  L +L LS NQL +LP  +  L+ L SL L +N+L TLP
Sbjct: 510 TSLDLRSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLP 569

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             I  L+ L+    SL L +N+L  LP +I  L  L  L L  N
Sbjct: 570 EVIGQLQSLT----SLDLSDNQLSELPRQICQLDTLCSLFLGGN 609



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/206 (34%), Positives = 109/206 (52%), Gaps = 26/206 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +++ +L L  N LS  P+   +  +L SLDLS+N+++ LP+ +     L++L  R+N L+
Sbjct: 507 QSLTSLDLRSNQLSTLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLS 566

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+ +  L++L   +LS NQL + P QI  + TL  L+LG N L  +P E+++L  L
Sbjct: 567 --TLPEVIGQLQSLTSLDLSDNQLSELPRQICQLDTLCSLFLGGNFLEQLPAELSRLLHL 624

Query: 175 HVLSLG----------------------GNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
             LSLG                      GN LT I D    L  LE L LS NQL  + +
Sbjct: 625 EKLSLGSASLIFDSYYHNVLRAFGASKQGNKLTHISDCLFSLPSLEVLDLSFNQLSRVDS 684

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEII 238
            I +L+ LK + L  N L  +P EI+
Sbjct: 685 KIQSLEKLKQIDLRGNPL-PIPPEIL 709



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 80/246 (32%), Positives = 127/246 (51%), Gaps = 21/246 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +++ +L L  N LS  P+   +  +L SLDLS+N+++ LP+ +     L++L  R+N L+
Sbjct: 461 QSLTSLNLRSNQLSTLPEAVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLDLRSNQLS 520

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+ +  L++L   +LS NQL   P  +  + +L  LYL +N L+ +P  I +L  L
Sbjct: 521 --TLPEVVGQLQSLTSLDLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEVIGQLQSL 578

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL--------- 225
             L L  N L+++P     L  L +L L  N LE LPA +S L  L+ L L         
Sbjct: 579 TSLDLSDNQLSELPRQICQLDTLCSLFLGGNFLEQLPAELSRLLHLEKLSLGSASLIFDS 638

Query: 226 -HNNKLRTLPTEIITLK------CLSE--KLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
            ++N LR         K      CL     L+ L L  N+L  + ++I +L+ L ++ LR
Sbjct: 639 YYHNVLRAFGASKQGNKLTHISDCLFSLPSLEVLDLSFNQLSRVDSKIQSLEKLKQIDLR 698

Query: 277 DNPLVI 282
            NPL I
Sbjct: 699 GNPLPI 704



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/174 (34%), Positives = 89/174 (51%), Gaps = 14/174 (8%)

Query: 116 ESLPKDMSNLKNLKVFNLS---------GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPR 166
           + LP ++  L  LK   L          GN L+  P +I  +  L+ L+L  N    +P 
Sbjct: 29  DELPPEIGKLTKLKTLVLGLWDKQRRRRGNNLQTLPDEIGRLTELRSLFLAYNQFEEIPE 88

Query: 167 EINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLH 226
            + +L KL  L+L  N L+ +P+  G L  L +L L  NQL +LP  +  L+ L SL L 
Sbjct: 89  VVGRLRKLRSLNLSSNQLSTLPEVVGQLQSLTSLYLRSNQLSTLPEVVGQLQSLTSLDLS 148

Query: 227 NNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +N+L TLP E++      + L SL L +N+L TLP  +  L+ L+ L L  N L
Sbjct: 149 SNQLSTLP-EVVG----QQSLTSLNLRSNQLSTLPEVVGQLQSLTSLDLSSNQL 197



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 13/114 (11%)

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILS---------DNQLESLPASISNLKMLKSLLLH 226
            L L G  + ++P   G L +L+ L+L           N L++LP  I  L  L+SL L 
Sbjct: 20  TLDLAGMGIDELPPEIGKLTKLKTLVLGLWDKQRRRRGNNLQTLPDEIGRLTELRSLFLA 79

Query: 227 NNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            N+   +P  +  L+    KL+SL L +N+L TLP  +  L+ L+ L LR N L
Sbjct: 80  YNQFEEIPEVVGRLR----KLRSLNLSSNQLSTLPEVVGQLQSLTSLYLRSNQL 129



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/160 (29%), Positives = 74/160 (46%), Gaps = 25/160 (15%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +++ +L L  N LS  P+   +  +L SLDLS+N+++ LP+ I     L +L    N L 
Sbjct: 553 QSLTSLYLRSNQLSTLPEVIGQLQSLTSLDLSDNQLSELPRQICQLDTLCSLFLGGNFL- 611

Query: 115 AESLPKDMSNLKNLKVFNLS----------------------GNQLEQFPIQILDIPTLK 152
            E LP ++S L +L+  +L                       GN+L      +  +P+L+
Sbjct: 612 -EQLPAELSRLLHLEKLSLGSASLIFDSYYHNVLRAFGASKQGNKLTHISDCLFSLPSLE 670

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFG 192
            L L  N L+ V  +I  L KL  + L GN L   P+  G
Sbjct: 671 VLDLSFNQLSRVDSKIQSLEKLKQIDLRGNPLPIPPEILG 710


>gi|421122075|ref|ZP_15582361.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410344842|gb|EKO95985.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 348

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 88/228 (38%), Positives = 120/228 (52%), Gaps = 7/228 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N++ L+    NL  FP   +K  NL+ L+L  N+I+ LP+ I     L  L   NN 
Sbjct: 39  KLQNLERLIFNGKNLKNFPKTITKLHNLKELNLGRNQISSLPEEIGELQNLKELDLNNNQ 98

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  SLP ++ NLKNL++  L GNQ+   P        LK LYL  N     P EI +L 
Sbjct: 99  LT--SLPVEIGNLKNLEILTLYGNQISVLPKDFSLPQNLKILYLSQNKFRKFPDEILQLQ 156

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L    N L ++P+  G L  L  L L  N+L+ LP+S S  + LKSL L+ N+ + 
Sbjct: 157 NLEWLDFSENQLKELPEKLGQLQNLNILYLLGNELKVLPSSFSEFRSLKSLNLNYNRFQV 216

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            P E+I+LK    KL++L L  N+   LP EI  L  L+ L L  N L
Sbjct: 217 FPKELISLK----KLETLELTGNQFTFLPEEIGNLSNLNSLFLEANRL 260



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/244 (36%), Positives = 125/244 (51%), Gaps = 30/244 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L  N +S  P+   +  NL+ LDL+NN++T LP  I N   L  L    N ++ 
Sbjct: 65  NLKELNLGRNQISSLPEEIGELQNLKELDLNNNQLTSLPVEIGNLKNLEILTLYGNQISV 124

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LPKD S  +NLK+  LS N+  +FP +IL +  L++L    N L  +P ++ +L  L+
Sbjct: 125 --LPKDFSLPQNLKILYLSQNKFRKFPDEILQLQNLEWLDFSENQLKELPEKLGQLQNLN 182

Query: 176 VLSLGGNSLTDIPDTFGD-----------------------LYQLEALILSDNQLESLPA 212
           +L L GN L  +P +F +                       L +LE L L+ NQ   LP 
Sbjct: 183 ILYLLGNELKVLPSSFSEFRSLKSLNLNYNRFQVFPKELISLKKLETLELTGNQFTFLPE 242

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSE 272
            I NL  L SL L  N+L+ LP  I  L    + L+SL L  N+L TLP EI +L+ L E
Sbjct: 243 EIGNLSNLNSLFLEANRLKQLPQNIGKL----QNLESLYLQENQLTTLPEEIGSLQNLKE 298

Query: 273 LSLR 276
           L L+
Sbjct: 299 LYLQ 302



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 71/191 (37%), Positives = 101/191 (52%), Gaps = 3/191 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L LY N +S  P + S   NL+ L LS N+    P  I     L  L    N L 
Sbjct: 110 KNLEILTLYGNQISVLPKDFSLPQNLKILYLSQNKFRKFPDEILQLQNLEWLDFSENQL- 168

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            + LP+ +  L+NL +  L GN+L+  P    +  +LK L L  N     P+E+  L KL
Sbjct: 169 -KELPEKLGQLQNLNILYLLGNELKVLPSSFSEFRSLKSLNLNYNRFQVFPKELISLKKL 227

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L GN  T +P+  G+L  L +L L  N+L+ LP +I  L+ L+SL L  N+L TLP
Sbjct: 228 ETLELTGNQFTFLPEEIGNLSNLNSLFLEANRLKQLPQNIGKLQNLESLYLQENQLTTLP 287

Query: 235 TEIITLKCLSE 245
            EI +L+ L E
Sbjct: 288 EEIGSLQNLKE 298



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 66/188 (35%), Positives = 95/188 (50%), Gaps = 5/188 (2%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
             QI +LP  D++  P+N+  L L  N    FPD   +  NL  LD S N++  LP+ + 
Sbjct: 119 GNQISVLPK-DFSL-PQNLKILYLSQNKFRKFPDEILQLQNLEWLDFSENQLKELPEKLG 176

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L+ L    N L    LP   S  ++LK  NL+ N+ + FP +++ +  L+ L L  
Sbjct: 177 QLQNLNILYLLGNELKV--LPSSFSEFRSLKSLNLNYNRFQVFPKELISLKKLETLELTG 234

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N    +P EI  L  L+ L L  N L  +P   G L  LE+L L +NQL +LP  I +L+
Sbjct: 235 NQFTFLPEEIGNLSNLNSLFLEANRLKQLPQNIGKLQNLESLYLQENQLTTLPEEIGSLQ 294

Query: 219 MLKSLLLH 226
            LK L L 
Sbjct: 295 NLKELYLQ 302



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/143 (37%), Positives = 79/143 (55%), Gaps = 4/143 (2%)

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           L+ F  +I+ +  L+ L     +L + P+ I KL  L  L+LG N ++ +P+  G+L  L
Sbjct: 30  LKSFTEEIVKLQNLERLIFNGKNLKNFPKTITKLHNLKELNLGRNQISSLPEEIGELQNL 89

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
           + L L++NQL SLP  I NLK L+ L L+ N++  LP +      L + LK L L  NK 
Sbjct: 90  KELDLNNNQLTSLPVEIGNLKNLEILTLYGNQISVLPKDF----SLPQNLKILYLSQNKF 145

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
           R  P EI+ L+ L  L   +N L
Sbjct: 146 RKFPDEILQLQNLEWLDFSENQL 168



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/167 (35%), Positives = 87/167 (52%), Gaps = 4/167 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           +S  +++  L+NL+    +G  L+ FP  I  +  LK L LG N ++ +P EI +L  L 
Sbjct: 31  KSFTEEIVKLQNLERLIFNGKNLKNFPKTITKLHNLKELNLGRNQISSLPEEIGELQNLK 90

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +P   G+L  LE L L  NQ+  LP   S  + LK L L  NK R  P 
Sbjct: 91  ELDLNNNQLTSLPVEIGNLKNLEILTLYGNQISVLPKDFSLPQNLKILYLSQNKFRKFPD 150

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           EI+ L    + L+ L    N+L+ LP ++  L+ L+ L L  N L +
Sbjct: 151 EILQL----QNLEWLDFSENQLKELPEKLGQLQNLNILYLLGNELKV 193


>gi|218441805|ref|YP_002380134.1| Miro domain-containing protein [Cyanothece sp. PCC 7424]
 gi|218174533|gb|ACK73266.1| Miro domain protein [Cyanothece sp. PCC 7424]
          Length = 1015

 Score =  119 bits (297), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 90/225 (40%), Positives = 120/225 (53%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L HN L+  PD+ +   NL  LDLS N++T LP ++T    L+ L  R N LT 
Sbjct: 95  NLTKLDLSHNQLTSLPDSLTHLVNLTKLDLSFNQLTSLPDSLTRLVNLTYLDLRGNQLT- 153

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLP  ++ L NL   +L GNQL   P  +  +  L YLYLG N L+ +   + +L  L 
Sbjct: 154 -SLPDSLTRLVNLTYLDLRGNQLTSLPDSLTRLVNLIYLYLGRNQLSSLLNSLTRLVNLT 212

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +PD+   L  L  L LSDNQL S P S+++L  L  L L  N+L +LP 
Sbjct: 213 ELDLSFNQLTSLPDSLTPLVNLTELDLSDNQLSSFPDSLTSLVNLTELYLTGNQLSSLPD 272

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +  L     KL  L L  N+L  LP  +  L  L+ L L+ NPL
Sbjct: 273 SLTRLA----KLSRLNLSRNQLSNLPDSLTRLVNLTYLYLKGNPL 313



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 60/181 (33%), Positives = 87/181 (48%), Gaps = 22/181 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNL-- 112
           N+  L L  N L+  PD+ ++  NL  LDL  N++T LP ++T     +   + RN L  
Sbjct: 141 NLTYLDLRGNQLTSLPDSLTRLVNLTYLDLRGNQLTSLPDSLTRLVNLIYLYLGRNQLSS 200

Query: 113 ----------LTA--------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYL 154
                     LT          SLP  ++ L NL   +LS NQL  FP  +  +  L  L
Sbjct: 201 LLNSLTRLVNLTELDLSFNQLTSLPDSLTPLVNLTELDLSDNQLSSFPDSLTSLVNLTEL 260

Query: 155 YLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASI 214
           YL  N L+ +P  + +L KL  L+L  N L+++PD+   L  L  L L  N LE+ P  I
Sbjct: 261 YLTGNQLSSLPDSLTRLAKLSRLNLSRNQLSNLPDSLTRLVNLTYLYLKGNPLETPPLEI 320

Query: 215 S 215
           +
Sbjct: 321 A 321



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 101/225 (44%), Gaps = 28/225 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           E ++ L L +NNLS   +      NL+ L L  N +T L   IT+               
Sbjct: 48  EWLEVLYLNYNNLSCISEYIYCLINLKELYLYCNNLTILSNHITD--------------- 92

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
                    L NL   +LS NQL   P  +  +  L  L L  N L  +P  + +L  L 
Sbjct: 93  ---------LVNLTKLDLSHNQLTSLPDSLTHLVNLTKLDLSFNQLTSLPDSLTRLVNLT 143

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L GN LT +PD+   L  L  L L  NQL SLP S++ L  L  L L  N+L +L  
Sbjct: 144 YLDLRGNQLTSLPDSLTRLVNLTYLDLRGNQLTSLPDSLTRLVNLIYLYLGRNQLSSLLN 203

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +  L  L+E    L L  N+L +LP  +  L  L+EL L DN L
Sbjct: 204 SLTRLVNLTE----LDLSFNQLTSLPDSLTPLVNLTELDLSDNQL 244



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 59/164 (35%), Positives = 80/164 (48%), Gaps = 4/164 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            +P+++  L+ L+V  L+ N L      I  +  LK LYL  N+L  +   I  L  L  
Sbjct: 39  EIPEEVFELEWLEVLYLNYNNLSCISEYIYCLINLKELYLYCNNLTILSNHITDLVNLTK 98

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N LT +PD+   L  L  L LS NQL SLP S++ L  L  L L  N+L +LP  
Sbjct: 99  LDLSHNQLTSLPDSLTHLVNLTKLDLSFNQLTSLPDSLTRLVNLTYLDLRGNQLTSLPDS 158

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +  L  L+     L L  N+L +LP  +  L  L  L L  N L
Sbjct: 159 LTRLVNLT----YLDLRGNQLTSLPDSLTRLVNLIYLYLGRNQL 198


>gi|418726308|ref|ZP_13284919.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960218|gb|EKO23972.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 312

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/225 (36%), Positives = 126/225 (56%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           ++  L+L    L+  P    +  NL+ LDL  N+   +P+ I     L  L    N    
Sbjct: 75  DVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYN--QF 132

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           +++PK +  LKNL++ +L  NQ +  P +I  +  L+ L L +N L  +P+EI KL  L 
Sbjct: 133 KTVPKKIEQLKNLQMLDLCYNQFKTVPKKIEQLKNLQVLNLSSNQLTTLPKEIGKLENLQ 192

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           VL+L  N L  +P   G L  L+ L L  N+L++LP  I  LK L++L L+ N+L TLP 
Sbjct: 193 VLNLSSNQLITLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPR 252

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI  L+ L+E    L L +N++ TLP EII L+ L +L+L +NP+
Sbjct: 253 EIGRLQSLTE----LHLQHNQIATLPDEIIQLQNLRKLTLYENPI 293



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 60/167 (35%), Positives = 86/167 (51%), Gaps = 4/167 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L + + N  ++++  LS  +L   P +I  +  L+ L L  N    VP+EI +L  
Sbjct: 62  TYRDLTEALQNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKN 121

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N    +P     L  L+ L L  NQ +++P  I  LK L+ L L +N+L TL
Sbjct: 122 LQMLDLCYNQFKTVPKKIEQLKNLQMLDLCYNQFKTVPKKIEQLKNLQVLNLSSNQLTTL 181

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P EI  L    E L+ L L +N+L TLP EI  L+ L  L+L  N L
Sbjct: 182 PKEIGKL----ENLQVLNLSSNQLITLPKEIGKLENLQVLNLGSNRL 224



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 5/122 (4%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K EN+  L L  N L   P    K  NL+ L+L +NR+  LP+ I     L TL    N 
Sbjct: 187 KLENLQVLNLSSNQLITLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQ 246

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP+++  L++L   +L  NQ+   P +I+ +  L+ L L  N +   P+E++K+ 
Sbjct: 247 LT--TLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYENPIP--PQELDKIR 302

Query: 173 KL 174
           KL
Sbjct: 303 KL 304


>gi|426256334|ref|XP_004021795.1| PREDICTED: LOW QUALITY PROTEIN: malignant fibrous
           histiocytoma-amplified sequence 1 [Ovis aries]
          Length = 1029

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 83/241 (34%), Positives = 119/241 (49%), Gaps = 26/241 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA------ 115
           L HN L   P       +L  LD+S NR+ HLP ++     L TL   +N LTA      
Sbjct: 140 LSHNQLPTLPAQLGALVHLEELDVSFNRLAHLPDSLAGLSRLRTLDVDHNQLTAFPRQLL 199

Query: 116 ---------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                            LP+D+S L+ LK+  LSG +L   P    ++ +L+ L L NN 
Sbjct: 200 QLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDNNG 259

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P + ++L +L +L+L  N L + P     L  LE L LS NQL S+P+ IS L  L
Sbjct: 260 LRALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRL 319

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DNPL
Sbjct: 320 LTLWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDNFGQLSRVGLWKIKDNPL 375

Query: 281 V 281
           +
Sbjct: 376 I 376



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 111/225 (49%), Gaps = 8/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +I+ L L +N L   PD   S   +LR L L  NR   LP A+      L+ L   +N L
Sbjct: 62  DIEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFAQLPPAVAELGHHLTELDVSHNRL 121

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           +    P+ +  L+ L+  NLS NQL   P Q+  +  L+ L +  N L H+P  +  L +
Sbjct: 122 SVLG-PEAVGALRELRKLNLSHNQLPTLPAQLGALVHLEELDVSFNRLAHLPDSLAGLSR 180

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L +  N LT  P     L  LE L +S N+L  LP  IS L+ LK L L   +L TL
Sbjct: 181 LRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 240

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P+      C    L+SL+L NN LR LP +   L+ L  L+L  N
Sbjct: 241 PSGF----CELASLESLMLDNNGLRALPAQFSRLQRLKMLNLSSN 281



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/173 (35%), Positives = 86/173 (49%), Gaps = 3/173 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L   P++ S    L+ L LS   +  LP        L +L+  NN L A  LP   S 
Sbjct: 212 NRLRGLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLRA--LPAQFSR 269

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ LK+ NLS N LE+FP  +L +  L+ LYL  N L  VP  I+ L +L  L L  N +
Sbjct: 270 LQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRI 329

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
             +PD+  +L  LE L+L  NQ+  LP +   L  +    + +N L   P E+
Sbjct: 330 RYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEV 382



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 86/188 (45%), Gaps = 24/188 (12%)

Query: 107 IARNNLLTAESLPKDMSNLKNLKVFNLSG----NQLEQ-------FPIQILDIPTLKYLY 155
           + R+  L A  L    SNL+ L + +  G    +QL+         P  I DI   + L 
Sbjct: 14  LWRDAALRARKL---RSNLRQLTLSSAGGCPGTDQLDSPDAPQLVLPANIGDI---EVLN 67

Query: 156 LGNNSLNHVPREIN-KLCKLHVLSLGGNSLTDIPDTFGDL-YQLEALILSDNQLESL-PA 212
           LGNN L  VP  +   L  L VL L  N    +P    +L + L  L +S N+L  L P 
Sbjct: 68  LGNNGLEEVPDGLGSALGSLRVLVLRRNRFAQLPPAVAELGHHLTELDVSHNRLSVLGPE 127

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSE 272
           ++  L+ L+ L L +N+L TLP ++  L  L E    L +  N+L  LP  +  L  L  
Sbjct: 128 AVGALRELRKLNLSHNQLPTLPAQLGALVHLEE----LDVSFNRLAHLPDSLAGLSRLRT 183

Query: 273 LSLRDNPL 280
           L +  N L
Sbjct: 184 LDVDHNQL 191


>gi|418666318|ref|ZP_13227747.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410757932|gb|EKR19533.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 313

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 101/285 (35%), Positives = 138/285 (48%), Gaps = 30/285 (10%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N L+  P    +  NLR L+L+ N+ T LP+ I     L  L    N  T
Sbjct: 17  QNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFT 76

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLPK++  L+ L+V NL+GNQ    P +I  +  L+ L L  N    +P+EI +L KL
Sbjct: 77  --SLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTFLPKEIGQLQKL 134

Query: 175 HVLSLGGNSLTDIPDTF------------GD-----------LYQLEALILSDNQLESLP 211
             L+L  N  T  P               GD           L  L++L L  NQL SLP
Sbjct: 135 EALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSLP 194

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             I  L+ L  L L +NKL+TLP EI  L    + L+SL L  N+L +LP EI  L+ L 
Sbjct: 195 KEIGQLQNLFELNLQDNKLKTLPKEIEQL----QNLQSLHLDGNQLTSLPKEIGQLQNLF 250

Query: 272 ELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLP 316
           EL+L+DN L          +   +L L S +  + E    QE LP
Sbjct: 251 ELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLKEKQKIQELLP 295



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/214 (38%), Positives = 113/214 (52%), Gaps = 7/214 (3%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           L   P     F NL  L+L  N++T LP+ I     L  L    N  T  SLPK++  L+
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFT--SLPKEIGQLQ 63

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL+  +L GNQ    P +I  +  L+ L L  N    +P+EI +L  L  L L GN  T 
Sbjct: 64  NLERLDLDGNQFTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLERLDLAGNQFTF 123

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P   G L +LEAL L  N+    P  I   + LK L L  ++L+TLP EI+ L    + 
Sbjct: 124 LPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLL----QN 179

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L+SL L  N+L +LP EI  L+ L EL+L+DN L
Sbjct: 180 LQSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKL 213



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 63/123 (51%), Gaps = 4/123 (3%)

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           +G + L  +PR I     L  L+L GN LT +P   G L  L  L L+ NQ  SLP  I 
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQFTSLPKEIG 60

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            L+ L+ L L  N+  +LP EI  L    +KL+ L L  N+  +LP EI  L+ L  L L
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEIGQL----QKLRVLNLAGNQFTSLPKEIGQLQNLERLDL 116

Query: 276 RDN 278
             N
Sbjct: 117 AGN 119



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 72/134 (53%), Gaps = 3/134 (2%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           ++ +++  L L  + L   P       NL+SL L  N++T LP+ I     L  L  ++N
Sbjct: 152 RQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSLPKEIGQLQNLFELNLQDN 211

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            L  ++LPK++  L+NL+  +L GNQL   P +I  +  L  L L +N L  +P+EI +L
Sbjct: 212 KL--KTLPKEIEQLQNLQSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQL 269

Query: 172 CKLHVLSLGGNSLT 185
             L VL L  NS +
Sbjct: 270 QNLQVLRLYSNSFS 283


>gi|359080498|ref|XP_003588007.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1-like
           [Bos taurus]
          Length = 1026

 Score =  119 bits (297), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 89/269 (33%), Positives = 137/269 (50%), Gaps = 20/269 (7%)

Query: 27  LDFSY---SSLDSETLATQIEL----LPNNDYNKKPENIDTLL------LYHNNLSFFPD 73
           LD S+   S L +E +    EL    L +N     P  +  L+      +  N L+  PD
Sbjct: 88  LDVSHNRLSVLGAEAVGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAHLPD 147

Query: 74  NASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFN 132
           + +  + LR+LD+ +N++T  P+ +     L  L   +N L    LP+D+S L+ LK+  
Sbjct: 148 SFAGLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRL--RGLPEDISALRALKILW 205

Query: 133 LSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFG 192
           LSG +L   P    ++ +L+ L L NN L  +P + ++L +L +L+L  N L + P    
Sbjct: 206 LSGAELGTLPSGFCELASLESLMLDNNGLRALPAQFSRLQRLKMLNLSSNLLEEFPAALL 265

Query: 193 DLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLL 252
            L  LE L LS NQL S+P  IS L  L +L L NN++R LP  I+ L  L E    L+L
Sbjct: 266 PLAGLEELYLSRNQLTSVPCLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEE----LVL 321

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             N++  LP     L  +    ++DNPL+
Sbjct: 322 QGNQIAVLPDNFGQLSRVGLWKIKDNPLI 350



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 85/253 (33%), Positives = 114/253 (45%), Gaps = 37/253 (14%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNN-- 111
           +I+ L L +N L   PD   S   +LR L L  NR   LPQA+      L+ L   +N  
Sbjct: 36  DIEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFAQLPQAVAELGHHLTELDVSHNRL 95

Query: 112 -LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
            +L AE+    +  L+ L+  NLS NQL   P Q+  +  L+ L +  N L H+P     
Sbjct: 96  SVLGAEA----VGALRELRKLNLSHNQLPALPAQLGALVHLEELDVSFNRLAHLPDSFAG 151

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK--------- 221
           L +L  L +  N LT  P     L  LE L +S N+L  LP  IS L+ LK         
Sbjct: 152 LSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAEL 211

Query: 222 --------------SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITL 267
                         SL+L NN LR LP +   L    ++LK L L +N L   P  ++ L
Sbjct: 212 GTLPSGFCELASLESLMLDNNGLRALPAQFSRL----QRLKMLNLSSNLLEEFPAALLPL 267

Query: 268 KCLSELSLRDNPL 280
             L EL L  N L
Sbjct: 268 AGLEELYLSRNQL 280



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 97/205 (47%), Gaps = 26/205 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF--------------- 101
            + TL + HN L+ FP    +   L  LD+S+NR+  LP+ I+                 
Sbjct: 154 RLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGT 213

Query: 102 ---------PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                     L +L+  NN L A  LP   S L+ LK+ NLS N LE+FP  +L +  L+
Sbjct: 214 LPSGFCELASLESLMLDNNGLRA--LPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLE 271

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYL  N L  VP  I+ L +L  L L  N +  +PD+  +L  LE L+L  NQ+  LP 
Sbjct: 272 ELYLSRNQLTSVPCLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPD 331

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEI 237
           +   L  +    + +N L   P E+
Sbjct: 332 NFGQLSRVGLWKIKDNPLIQPPYEV 356



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 80/193 (41%), Gaps = 34/193 (17%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREIN-KLC 172
            AE     +  L  +K+   +G +  + P  I DI  L    LGNN L  VP  +   L 
Sbjct: 4   VAEPGATVLVELAQVKMMRAAGPR-RRGPANIGDIEVLN---LGNNGLEEVPDGLGSALG 59

Query: 173 KLHVLSLGGNSLTDIP-------------------------DTFGDLYQLEALILSDNQL 207
            L VL L  N    +P                         +  G L +L  L LS NQL
Sbjct: 60  SLRVLVLRRNRFAQLPQAVAELGHHLTELDVSHNRLSVLGAEAVGALRELRKLNLSHNQL 119

Query: 208 ESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITL 267
            +LPA +  L  L+ L +  N+L  LP     L     +L++L + +N+L   P +++ L
Sbjct: 120 PALPAQLGALVHLEELDVSFNRLAHLPDSFAGLS----RLRTLDVDHNQLTAFPRQLLQL 175

Query: 268 KCLSELSLRDNPL 280
             L EL +  N L
Sbjct: 176 VALEELDVSSNRL 188


>gi|291224779|ref|XP_002732380.1| PREDICTED: Lap1-like, partial [Saccoglossus kowalevskii]
          Length = 1162

 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 81/235 (34%), Positives = 128/235 (54%), Gaps = 22/235 (9%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L H+ L+  P    +   L+ LDLS N+I+ +P+++     L+ L  R+N LT  S+P +
Sbjct: 213 LKHSELTIVPSEIGECHELQKLDLSFNKISKIPESLYALEQLTELNMRSNALT--SVPDE 270

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  LK++K  NLS N++E+ P  +  +  L  L +G+N+L  +P EI KL  +  L L  
Sbjct: 271 IGKLKSMKTLNLSSNKIEKIPASLCALEKLTELNMGSNALTSIPDEIGKLKSMETLDLSF 330

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N +  IPD+   L +L  L ++DN L S+P  I  LK +K+L L +NK+  +P  + TL+
Sbjct: 331 NKIDKIPDSLCALEKLTELYMNDNALTSVPDEIGKLKSMKTLNLSSNKIEKIPASLCTLE 390

Query: 242 CLSE----------------KLKS---LLLHNNKLRTLPTEIITLKCLSELSLRD 277
            L+E                KLKS   L L NNK+  +P  +  L+ L+EL + D
Sbjct: 391 QLTELDMKYNALTAIPDEISKLKSMNILNLDNNKMEKIPDSLCALQQLTELDMND 445



 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/242 (33%), Positives = 129/242 (53%), Gaps = 13/242 (5%)

Query: 46  LPNNDYNKKP------ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN   K P      + +  L +  N L+  PD   K  ++ +L+LS N+I  +P ++ 
Sbjct: 564 LDNNKMKKIPASLCALQQLTELYMNGNALTSIPDEIGKLKSMETLNLSFNKIEKIPDSLC 623

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L+ L  R+N LT  S+P ++  LK++K  NLS N++E+ P  +  +  L  L + +
Sbjct: 624 ALEQLTELNMRSNALT--SVPDEIGKLKSMKTLNLSSNKIEKIPASLCALDQLTELIMRS 681

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N+L  +P EI+KL  + +L+L  N +  IPD+   L QL  L +  N L S+P  I  LK
Sbjct: 682 NALTAIPDEISKLKSMKILNLDNNKMEKIPDSLCALQQLTELDIRSNALTSIPDEIGKLK 741

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            +K L L NNK+  +P  +    C  EKL  L + +N L  +P EI  LK ++ L+L  N
Sbjct: 742 SMKILNLDNNKMEKIPDSL----CALEKLTDLNMEHNALTAIPDEIGKLKSMTTLNLSFN 797

Query: 279 PL 280
            +
Sbjct: 798 KI 799



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 133/266 (50%), Gaps = 36/266 (13%)

Query: 46  LPNNDYNKKP------ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN   K P      + +  L +  N L+  PD  SK  +++ L+L  N+I  +P ++ 
Sbjct: 472 LDNNKMKKIPASLCALQQLTELYMNGNALTSIPDEISKLKSMKILNLYFNKIDKIPDSLC 531

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L+ L   +N LT  S+P ++S LK++K+ NL  N++++ P  +  +  L  LY+  
Sbjct: 532 ALEKLTELNMASNALT--SIPDEISKLKSMKILNLDNNKMKKIPASLCALQQLTELYMNG 589

Query: 159 NSLNHVPREINKLCKLHVLSLG-----------------------GNSLTDIPDTFGDLY 195
           N+L  +P EI KL  +  L+L                         N+LT +PD  G L 
Sbjct: 590 NALTSIPDEIGKLKSMETLNLSFNKIEKIPDSLCALEQLTELNMRSNALTSVPDEIGKLK 649

Query: 196 QLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNN 255
            ++ L LS N++E +PAS+  L  L  L++ +N L  +P EI  LK     +K L L NN
Sbjct: 650 SMKTLNLSSNKIEKIPASLCALDQLTELIMRSNALTAIPDEISKLK----SMKILNLDNN 705

Query: 256 KLRTLPTEIITLKCLSELSLRDNPLV 281
           K+  +P  +  L+ L+EL +R N L 
Sbjct: 706 KMEKIPDSLCALQQLTELDIRSNALT 731



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 128/232 (55%), Gaps = 13/232 (5%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----- 110
           E +  L + +N L+  PD  SK  ++  L+L NN++  +P ++      T +  N     
Sbjct: 390 EQLTELDMKYNALTAIPDEISKLKSMNILNLDNNKMEKIPDSLCALQQLTELDMNDXXXM 449

Query: 111 --NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREI 168
             N LT  S+P ++S LK++K+ NL  N++++ P  +  +  L  LY+  N+L  +P EI
Sbjct: 450 ASNALT--SIPDEISKLKSMKILNLDNNKMKKIPASLCALQQLTELYMNGNALTSIPDEI 507

Query: 169 NKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
           +KL  + +L+L  N +  IPD+   L +L  L ++ N L S+P  IS LK +K L L NN
Sbjct: 508 SKLKSMKILNLYFNKIDKIPDSLCALEKLTELNMASNALTSIPDEISKLKSMKILNLDNN 567

Query: 229 KLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           K++ +P  +  L+ L+E    L ++ N L ++P EI  LK +  L+L  N +
Sbjct: 568 KMKKIPASLCALQQLTE----LYMNGNALTSIPDEIGKLKSMETLNLSFNKI 615



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 87/263 (33%), Positives = 143/263 (54%), Gaps = 17/263 (6%)

Query: 20  KTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFT 79
           K  S++TL+ S++         +IE +P  D     E +  L +  N L+  PD   K  
Sbjct: 601 KLKSMETLNLSFN---------KIEKIP--DSLCALEQLTELNMRSNALTSVPDEIGKLK 649

Query: 80  NLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           ++++L+LS+N+I  +P ++     L+ LI R+N LTA  +P ++S LK++K+ NL  N++
Sbjct: 650 SMKTLNLSSNKIEKIPASLCALDQLTELIMRSNALTA--IPDEISKLKSMKILNLDNNKM 707

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
           E+ P  +  +  L  L + +N+L  +P EI KL  + +L+L  N +  IPD+   L +L 
Sbjct: 708 EKIPDSLCALQQLTELDIRSNALTSIPDEIGKLKSMKILNLDNNKMEKIPDSLCALEKLT 767

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT-LKCLSEKLKSLLLHNNKL 257
            L +  N L ++P  I  LK + +L L  NK+  +P  +   +K L  KL  L L+ NKL
Sbjct: 768 DLNMEHNALTAIPDEIGKLKSMTTLNLSFNKIEKIPDSLCAGIKKL--KLIHLRLNENKL 825

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
           +  P ++I    L ELSL  N L
Sbjct: 826 KEFPWQVIEELPLCELSLCGNKL 848



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/161 (31%), Positives = 81/161 (50%), Gaps = 12/161 (7%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN   K P+++  L       +  N L+  PD   K  +++ L+L NN++  +P ++ 
Sbjct: 702 LDNNKMEKIPDSLCALQQLTELDIRSNALTSIPDEIGKLKSMKILNLDNNKMEKIPDSLC 761

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQIL-DIPTLK--YLY 155
               L+ L   +N LTA  +P ++  LK++   NLS N++E+ P  +   I  LK  +L 
Sbjct: 762 ALEKLTDLNMEHNALTA--IPDEIGKLKSMTTLNLSFNKIEKIPDSLCAGIKKLKLIHLR 819

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQ 196
           L  N L   P ++ +   L  LSL GN L  +PD  G L +
Sbjct: 820 LNENKLKEFPWQVIEELPLCELSLCGNKLQTVPDHIGRLLR 860



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/184 (30%), Positives = 93/184 (50%), Gaps = 24/184 (13%)

Query: 121  DMSNL---KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
            D+S L   K+L++ NL   +L   P +I +   L+ L L  N +  +P  +  L KL  +
Sbjct: 924  DLSRLGSYKHLRMLNLEHGELTIVPSEIGECHKLQKLELSFNKIAKIPDSLCALEKLTEI 983

Query: 178  SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            ++G N+LT IPD    L  ++ L LS N++  +P S+  L+ L+ L ++ N L  +P+  
Sbjct: 984  NMGSNALTSIPDEISKLKSMKTLNLSFNKIAKIPDSLCALEQLRILNMNGNALTAIPSVK 1043

Query: 238  ITLKCL---------------SEKLKS-----LLLHNNKLRTLPTEII-TLKCLSELSLR 276
            +  + L               SE++K      L L++NKL+  P +II  L  L +LSL 
Sbjct: 1044 LQHQTLDIDNGASVFSLCFGMSERIKKLKLIRLQLNDNKLKEFPWQIIEELHSLYKLSLC 1103

Query: 277  DNPL 280
             N L
Sbjct: 1104 GNEL 1107



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/175 (28%), Positives = 84/175 (48%), Gaps = 35/175 (20%)

Query: 118  LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
            +P ++     L+   LS N++ + P  +  +  L  + +G+N+L  +P EI+KL  +  L
Sbjct: 947  VPSEIGECHKLQKLELSFNKIAKIPDSLCALEKLTEINMGSNALTSIPDEISKLKSMKTL 1006

Query: 178  SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA------------------------- 212
            +L  N +  IPD+   L QL  L ++ N L ++P+                         
Sbjct: 1007 NLSFNKIAKIPDSLCALEQLRILNMNGNALTAIPSVKLQHQTLDIDNGASVFSLCFGMSE 1066

Query: 213  SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLL---LHNNKLRTLPTEI 264
             I  LK+++ L L++NKL+  P +II      E+L SL    L  N+L+T+P  I
Sbjct: 1067 RIKKLKLIR-LQLNDNKLKEFPWQII------EELHSLYKLSLCGNELQTVPDHI 1114



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 68/236 (28%), Positives = 110/236 (46%), Gaps = 26/236 (11%)

Query: 10   SSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLS 69
            ++D S  D+   V +K LD SY    S      I+L     Y    +++  L L H  L+
Sbjct: 897  TTDLSTKDTATHVGMK-LDLSYGKHKS------IDLSRLGSY----KHLRMLNLEHGELT 945

Query: 70   FFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNL 128
              P    +   L+ L+LS N+I  +P ++     L+ +   +N LT  S+P ++S LK++
Sbjct: 946  IVPSEIGECHKLQKLELSFNKIAKIPDSLCALEKLTEINMGSNALT--SIPDEISKLKSM 1003

Query: 129  KVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG-GNSLTDI 187
            K  NLS N++ + P  +  +  L+ L +  N+L  +P       KL   +L   N  +  
Sbjct: 1004 KTLNLSFNKIAKIPDSLCALEQLRILNMNGNALTAIPS-----VKLQHQTLDIDNGASVF 1058

Query: 188  PDTFG-----DLYQLEALILSDNQLESLPAS-ISNLKMLKSLLLHNNKLRTLPTEI 237
               FG        +L  L L+DN+L+  P   I  L  L  L L  N+L+T+P  I
Sbjct: 1059 SLCFGMSERIKKLKLIRLQLNDNKLKEFPWQIIEELHSLYKLSLCGNELQTVPDHI 1114


>gi|402912243|ref|XP_003918687.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1,
           partial [Papio anubis]
          Length = 1076

 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 120/241 (49%), Gaps = 26/241 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA------ 115
           L HN L   P       +L  LD+S NR+THLP +++    L TL   +N LTA      
Sbjct: 166 LSHNQLPALPAQLGALAHLEELDVSFNRLTHLPDSLSCLSRLRTLDVDHNQLTAFPRQLL 225

Query: 116 ---------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                            LP+D+S L  LK+  LSG +L   P    ++ +L+ L L NN 
Sbjct: 226 QLVALEELDVSSNRLRGLPEDISALCALKILWLSGAELGTLPAGFCELASLESLMLDNNG 285

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P + ++L +L +L+L  N L + P     L  LE L LS NQL S+P+ IS L  L
Sbjct: 286 LQALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRL 345

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DNPL
Sbjct: 346 LTLWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDNFGQLSRVGLWKIKDNPL 401

Query: 281 V 281
           +
Sbjct: 402 I 402



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 111/225 (49%), Gaps = 8/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +I+ L L +N L   P+   S   +LR L L  NR   LP A+      L+ L   +N L
Sbjct: 88  DIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 147

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA    + +S L+ L+  NLS NQL   P Q+  +  L+ L +  N L H+P  ++ L +
Sbjct: 148 TALGA-EVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLTHLPDSLSCLSR 206

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L +  N LT  P     L  LE L +S N+L  LP  IS L  LK L L   +L TL
Sbjct: 207 LRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALKILWLSGAELGTL 266

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P       C    L+SL+L NN L+ LP +   L+ L  L+L  N
Sbjct: 267 PAGF----CELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSN 307



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 97/205 (47%), Gaps = 26/205 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF--------------- 101
            + TL + HN L+ FP    +   L  LD+S+NR+  LP+ I+                 
Sbjct: 206 RLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALKILWLSGAELGT 265

Query: 102 ---------PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                     L +L+  NN L A  LP   S L+ LK+ NLS N LE+FP  +L +  L+
Sbjct: 266 LPAGFCELASLESLMLDNNGLQA--LPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLE 323

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYL  N L  VP  I+ L +L  L L  N +  +PD+  +L  LE L+L  NQ+  LP 
Sbjct: 324 ELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPD 383

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEI 237
           +   L  +    + +N L   P E+
Sbjct: 384 NFGQLSRVGLWKIKDNPLIQPPYEV 408



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 7/161 (4%)

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILD-IPTLKYLYLGNNSLNHVPREINKLC-KLHVLSLG 180
           +NL +++  NL  N LE+ P  +   + +L+ L L  N    +P  + +L   L  L + 
Sbjct: 84  ANLGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVS 143

Query: 181 GNSLTDI-PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
            N LT +  +    L +L  L LS NQL +LPA +  L  L+ L +  N+L  LP    +
Sbjct: 144 HNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLTHLPD---S 200

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L CLS +L++L + +N+L   P +++ L  L EL +  N L
Sbjct: 201 LSCLS-RLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRL 240


>gi|383422865|gb|AFH34646.1| malignant fibrous histiocytoma-amplified sequence 1 [Macaca
           mulatta]
 gi|387540264|gb|AFJ70759.1| malignant fibrous histiocytoma-amplified sequence 1 [Macaca
           mulatta]
          Length = 1052

 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 119/241 (49%), Gaps = 26/241 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA------ 115
           L HN L   P        L  LD+S NR+THLP +++    L TL   +N LTA      
Sbjct: 142 LSHNQLPALPAQLGALAQLEELDVSFNRLTHLPDSLSCLSRLRTLDVDHNQLTAFPRQLL 201

Query: 116 ---------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                            LP+D+S L  LK+  LSG +L   P    ++ +L+ L L NN 
Sbjct: 202 QLVALEELDVSSNRLRGLPEDISALCALKILWLSGAELGTLPAGFCELASLESLMLDNNG 261

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P + ++L +L +L+L  N L + P     L  LE L LS NQL S+P+ IS L  L
Sbjct: 262 LQALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRL 321

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DNPL
Sbjct: 322 LTLWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDNFGQLSRVGLWKIKDNPL 377

Query: 281 V 281
           +
Sbjct: 378 I 378



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 111/225 (49%), Gaps = 8/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +I+ L L +N L   P+   S   +LR L L  NR   LP A+      L+ L   +N L
Sbjct: 64  DIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 123

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA    + +S L+ L+  NLS NQL   P Q+  +  L+ L +  N L H+P  ++ L +
Sbjct: 124 TALGA-EVVSALRELRKLNLSHNQLPALPAQLGALAQLEELDVSFNRLTHLPDSLSCLSR 182

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L +  N LT  P     L  LE L +S N+L  LP  IS L  LK L L   +L TL
Sbjct: 183 LRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALKILWLSGAELGTL 242

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P       C    L+SL+L NN L+ LP +   L+ L  L+L  N
Sbjct: 243 PAGF----CELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSN 283



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 97/205 (47%), Gaps = 26/205 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF--------------- 101
            + TL + HN L+ FP    +   L  LD+S+NR+  LP+ I+                 
Sbjct: 182 RLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALKILWLSGAELGT 241

Query: 102 ---------PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                     L +L+  NN L A  LP   S L+ LK+ NLS N LE+FP  +L +  L+
Sbjct: 242 LPAGFCELASLESLMLDNNGLQA--LPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLE 299

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYL  N L  VP  I+ L +L  L L  N +  +PD+  +L  LE L+L  NQ+  LP 
Sbjct: 300 ELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPD 359

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEI 237
           +   L  +    + +N L   P E+
Sbjct: 360 NFGQLSRVGLWKIKDNPLIQPPYEV 384



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 7/161 (4%)

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILD-IPTLKYLYLGNNSLNHVPREINKLC-KLHVLSLG 180
           +NL +++  NL  N LE+ P  +   + +L+ L L  N    +P  + +L   L  L + 
Sbjct: 60  ANLGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVS 119

Query: 181 GNSLTDI-PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
            N LT +  +    L +L  L LS NQL +LPA +  L  L+ L +  N+L  LP    +
Sbjct: 120 HNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAQLEELDVSFNRLTHLPD---S 176

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L CLS +L++L + +N+L   P +++ L  L EL +  N L
Sbjct: 177 LSCLS-RLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRL 216


>gi|418719292|ref|ZP_13278492.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410744445|gb|EKQ93186.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 399

 Score =  118 bits (296), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 117/323 (36%), Positives = 152/323 (47%), Gaps = 35/323 (10%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K + I+ L L +N L+  P +  K   LR LDL+NN +T LP+ I     L  L   NN 
Sbjct: 84  KLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLTTLPKEIGQLQNLRELYLYNNQ 143

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI--------------------LDIPTLK 152
           L  ++LPKD+  L+NL+   L GNQL+  P  I                     DI  LK
Sbjct: 144 L--KTLPKDIGQLQNLRELYLDGNQLKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLK 201

Query: 153 ---YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
               L L NN L  +P+EI KL  L VL LG   LT +P+  G L  L  L LS NQ+ +
Sbjct: 202 NLGELLLINNELTTLPKEIGKLKNLQVLYLGA-LLTTLPNDIGYLKSLRELNLSGNQITT 260

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           LP  I  L+ L+ L L  N+L TLP EI  L+ L E    L L  N++ TLP EI  L+ 
Sbjct: 261 LPKDIGQLQNLQVLYLSENQLATLPKEIGQLQNLRE----LDLSGNQITTLPKEIGELQS 316

Query: 270 LSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLES--AH 327
           L EL+L  N   I  +     K  SL EL     ++  I     HL    V YL+   A 
Sbjct: 317 LRELNLSGNQ--ITTLPKEIGKLQSLRELNLGGNQITTIPKEIGHLKNLQVLYLDDIPAW 374

Query: 328 HCVNPKCKGVFFDNRIEHIKFVD 350
                K + +    RI   +F D
Sbjct: 375 RSQKEKIRKLLPKTRIIFDQFGD 397



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 88/215 (40%), Positives = 114/215 (53%), Gaps = 9/215 (4%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMS 123
           HNN    P    +  NL  L LS+N++  LP+ I     +  L   NN LT  +LPKD+ 
Sbjct: 50  HNN-ETLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLT--TLPKDIG 106

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            LK L+  +L+ N L   P +I  +  L+ LYL NN L  +P++I +L  L  L L GN 
Sbjct: 107 KLKKLRELDLTNNLLTTLPKEIGQLQNLRELYLYNNQLKTLPKDIGQLQNLRELYLDGNQ 166

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           L  +P   G L  L  L L++N L +LP  I NLK L  LLL NN+L TLP EI  LK L
Sbjct: 167 LKTLPKDIGKLQNLTELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNL 226

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
                 +L     L TLP +I  LK L EL+L  N
Sbjct: 227 -----QVLYLGALLTTLPNDIGYLKSLRELNLSGN 256



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/227 (39%), Positives = 120/227 (52%), Gaps = 8/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N+  L L  N L   P    K   +  L LSNN++T LP+ I     L  L   NNLLT
Sbjct: 63  QNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLRELDLTNNLLT 122

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+   L  NQL+  P  I  +  L+ LYL  N L  +P++I KL  L
Sbjct: 123 --TLPKEIGQLQNLRELYLYNNQLKTLPKDIGQLQNLRELYLDGNQLKTLPKDIGKLQNL 180

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N LT +P   G+L  L  L+L +N+L +LP  I  LK L+ L L    L TLP
Sbjct: 181 TELNLTNNPLTTLPKDIGNLKNLGELLLINNELTTLPKEIGKLKNLQVLYL-GALLTTLP 239

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            +I  LK L E    L L  N++ TLP +I  L+ L  L L +N L 
Sbjct: 240 NDIGYLKSLRE----LNLSGNQITTLPKDIGQLQNLQVLYLSENQLA 282



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 72/166 (43%), Positives = 97/166 (58%), Gaps = 4/166 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           E+LPK++  L+NL    LS NQL+  P +I  +  ++ L L NN L  +P++I KL KL 
Sbjct: 53  ETLPKEIGELQNLTELYLSSNQLKTLPKEIGKLQKIERLSLSNNQLTTLPKDIGKLKKLR 112

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +P   G L  L  L L +NQL++LP  I  L+ L+ L L  N+L+TLP 
Sbjct: 113 ELDLTNNLLTTLPKEIGQLQNLRELYLYNNQLKTLPKDIGQLQNLRELYLDGNQLKTLPK 172

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +I  L+ L+E    L L NN L TLP +I  LK L EL L +N L 
Sbjct: 173 DIGKLQNLTE----LNLTNNPLTTLPKDIGNLKNLGELLLINNELT 214


>gi|428311014|ref|YP_007121991.1| hypothetical protein Mic7113_2802 [Microcoleus sp. PCC 7113]
 gi|428252626|gb|AFZ18585.1| leucine-rich repeat (LRR) protein [Microcoleus sp. PCC 7113]
          Length = 348

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 90/219 (41%), Positives = 115/219 (52%), Gaps = 7/219 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           LY N L   P    + TNL+ LDLS N++  LP+ I N   L+ L   NN LTA  LPK+
Sbjct: 46  LYGNQLGMLPPEIGQLTNLKELDLSGNQLKALPEEIGNLTNLTDLCLDNNQLTA--LPKE 103

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           + NL NL   +L  NQL   P +I  +  L  L L +N L  +P+EI  L  L+ LS   
Sbjct: 104 IGNLTNLTGLSLDSNQLTALPEEIGKLINLTRLSLYSNRLTGLPKEIGNLTHLNRLSCDN 163

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P   G+   L  L L +NQL  LP  I NL  L  L + NNKL +LP EI  L 
Sbjct: 164 NQLMTLPKEIGNFINLTGLSLDNNQLRELPQDIGNLTNLTRLSIDNNKLTSLPKEIGNLT 223

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            L++    L L NNKL  L  EI  L  L+ L++  N L
Sbjct: 224 NLTQ----LSLDNNKLTELLKEIGNLTHLTALAIDSNQL 258



 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 90/226 (39%), Positives = 124/226 (54%), Gaps = 7/226 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L  N L+  P+   K  NL  L L +NR+T LP+ I N   L+ L   NN L  
Sbjct: 109 NLTGLSLDSNQLTALPEEIGKLINLTRLSLYSNRLTGLPKEIGNLTHLNRLSCDNNQLM- 167

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LPK++ N  NL   +L  NQL + P  I ++  L  L + NN L  +P+EI  L  L 
Sbjct: 168 -TLPKEIGNFINLTGLSLDNNQLRELPQDIGNLTNLTRLSIDNNKLTSLPKEIGNLTNLT 226

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            LSL  N LT++    G+L  L AL +  NQL+SLP  +  L  L +L L+ N+L +LPT
Sbjct: 227 QLSLDNNKLTELLKEIGNLTHLTALAIDSNQLKSLPEEMGQLINLTTLSLYKNQLSSLPT 286

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            I  L  L++    L L++N+L  LP EI  L  L+ LSL +NPL 
Sbjct: 287 AIGNLTHLTK----LSLYSNQLTALPKEIGILTNLTSLSLDNNPLT 328



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/227 (37%), Positives = 115/227 (50%), Gaps = 13/227 (5%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N     PE I  L+      LY N L+  P      T+L  L   NN++  LP+ I 
Sbjct: 115 LDSNQLTALPEEIGKLINLTRLSLYSNRLTGLPKEIGNLTHLNRLSCDNNQLMTLPKEIG 174

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
           NF  L+ L   NN L    LP+D+ NL NL   ++  N+L   P +I ++  L  L L N
Sbjct: 175 NFINLTGLSLDNNQL--RELPQDIGNLTNLTRLSIDNNKLTSLPKEIGNLTNLTQLSLDN 232

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  + +EI  L  L  L++  N L  +P+  G L  L  L L  NQL SLP +I NL 
Sbjct: 233 NKLTELLKEIGNLTHLTALAIDSNQLKSLPEEMGQLINLTTLSLYKNQLSSLPTAIGNLT 292

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
            L  L L++N+L  LP EI  L  L+    SL L NN L + P+EII
Sbjct: 293 HLTKLSLYSNQLTALPKEIGILTNLT----SLSLDNNPLTSPPSEII 335



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/203 (42%), Positives = 108/203 (53%), Gaps = 13/203 (6%)

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           SLDL N+++T LP  I N   L+ L    N L    LP ++  L NLK  +LSGNQL+  
Sbjct: 20  SLDLHNHQLTTLPAEIGNLTHLTRLSLYGNQLGM--LPPEIGQLTNLKELDLSGNQLKAL 77

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P +I ++  L  L L NN L  +P+EI  L  L  LSL  N LT +P+  G L  L  L 
Sbjct: 78  PEEIGNLTNLTDLCLDNNQLTALPKEIGNLTNLTGLSLDSNQLTALPEEIGKLINLTRLS 137

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI---ITLKCLSEKLKSLLLHNNKLR 258
           L  N+L  LP  I NL  L  L   NN+L TLP EI   I L  LS       L NN+LR
Sbjct: 138 LYSNRLTGLPKEIGNLTHLNRLSCDNNQLMTLPKEIGNFINLTGLS-------LDNNQLR 190

Query: 259 TLPTEIITLKCLSELSLRDNPLV 281
            LP +I  L  L+ LS+ +N L 
Sbjct: 191 ELPQDIGNLTNLTRLSIDNNKLT 213



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 46/109 (42%), Positives = 56/109 (51%), Gaps = 4/109 (3%)

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           K+  L L  + LT +P   G+L  L  L L  NQL  LP  I  L  LK L L  N+L+ 
Sbjct: 17  KVTSLDLHNHQLTTLPAEIGNLTHLTRLSLYGNQLGMLPPEIGQLTNLKELDLSGNQLKA 76

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP EI  L  L++    L L NN+L  LP EI  L  L+ LSL  N L 
Sbjct: 77  LPEEIGNLTNLTD----LCLDNNQLTALPKEIGNLTNLTGLSLDSNQLT 121


>gi|109085638|ref|XP_001090936.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Macaca mulatta]
          Length = 1052

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 84/241 (34%), Positives = 119/241 (49%), Gaps = 26/241 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA------ 115
           L HN L   P        L  LD+S NR+THLP +++    L TL   +N LTA      
Sbjct: 142 LSHNQLPALPAQLGALAQLEELDVSFNRLTHLPDSLSCLSRLRTLDVDHNQLTAFPRQLL 201

Query: 116 ---------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                            LP+D+S L  LK+  LSG +L   P    ++ +L+ L L NN 
Sbjct: 202 QLVALEELDVSSNRLRGLPEDISALCALKILWLSGAELGTLPAGFCELASLESLMLDNNG 261

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P + ++L +L +L+L  N L + P     L  LE L LS NQL S+P+ IS L  L
Sbjct: 262 LQALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRL 321

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DNPL
Sbjct: 322 LTLWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDNFGQLSRVGLWKIKDNPL 377

Query: 281 V 281
           +
Sbjct: 378 I 378



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 111/225 (49%), Gaps = 8/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +I+ L L +N L   P+   S   +LR L L  NR   LP A+      L+ L   +N L
Sbjct: 64  DIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 123

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA    + +S L+ L+  NLS NQL   P Q+  +  L+ L +  N L H+P  ++ L +
Sbjct: 124 TALGA-EVVSALRELRKLNLSHNQLPALPAQLGALAQLEELDVSFNRLTHLPDSLSCLSR 182

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L +  N LT  P     L  LE L +S N+L  LP  IS L  LK L L   +L TL
Sbjct: 183 LRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALKILWLSGAELGTL 242

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P       C    L+SL+L NN L+ LP +   L+ L  L+L  N
Sbjct: 243 PAGF----CELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSN 283



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 97/205 (47%), Gaps = 26/205 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF--------------- 101
            + TL + HN L+ FP    +   L  LD+S+NR+  LP+ I+                 
Sbjct: 182 RLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALKILWLSGAELGT 241

Query: 102 ---------PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                     L +L+  NN L A  LP   S L+ LK+ NLS N LE+FP  +L +  L+
Sbjct: 242 LPAGFCELASLESLMLDNNGLQA--LPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLE 299

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYL  N L  VP  I+ L +L  L L  N +  +PD+  +L  LE L+L  NQ+  LP 
Sbjct: 300 ELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPD 359

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEI 237
           +   L  +    + +N L   P E+
Sbjct: 360 NFGQLSRVGLWKIKDNPLIQPPYEV 384



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 7/161 (4%)

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILD-IPTLKYLYLGNNSLNHVPREINKLC-KLHVLSLG 180
           +NL +++  NL  N LE+ P  +   + +L+ L L  N    +P  + +L   L  L + 
Sbjct: 60  ANLGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVS 119

Query: 181 GNSLTDI-PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
            N LT +  +    L +L  L LS NQL +LPA +  L  L+ L +  N+L  LP    +
Sbjct: 120 HNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAQLEELDVSFNRLTHLPD---S 176

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L CLS +L++L + +N+L   P +++ L  L EL +  N L
Sbjct: 177 LSCLS-RLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRL 216


>gi|456825507|gb|EMF73903.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 588

 Score =  118 bits (296), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 93/247 (37%), Positives = 122/247 (49%), Gaps = 22/247 (8%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P N+  L L   N +  P    K  NL++L+L +N++  LP  I     L  L  R N L
Sbjct: 49  PLNVRVLNLSGQNFTTLPKEIEKLKNLQTLNLQDNQLATLPVEIGQLQNLEKLNLRKNRL 108

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++  L+NL+  NL  NQL   P++I  +  L+ L L  N L   P+EI +L  
Sbjct: 109 TV--LPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLEN 166

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N LT +P   G L  LE L LS+NQL + P  I  LK L+ L L  N+L T 
Sbjct: 167 LQELNLKWNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTF 226

Query: 234 PTEIITLKCLS------EKLKSL-------------LLHNNKLRTLPTEIITLKCLSELS 274
           P EI  LK L        + K++              L  N+L TLP EI  LK L +LS
Sbjct: 227 PKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLS 286

Query: 275 LRDNPLV 281
           L  N L 
Sbjct: 287 LGRNQLT 293



 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/227 (40%), Positives = 120/227 (52%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +  NL +L L  N++T  P+ I     L  L   NN LT
Sbjct: 303 KNLYNLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLTTFPKEIGQLENLQELDLWNNRLT 362

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  LPK++  LKNL+   LS NQL  FP +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 363 A--LPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLKNL 420

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             LSL  N LT +P   G L  LE L LS+N+L +LP  I  L+ L+ L L  N+  T P
Sbjct: 421 QTLSLSYNRLTTLPKEIGQLKNLENLELSENRLATLPKEIGQLQNLQKLDLDTNRFATFP 480

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  L    + L +L L NN+L  LP EI  LK L +L L  N L 
Sbjct: 481 KEIGQL----QNLYNLDLGNNQLTALPKEIAQLKNLYDLDLNTNQLT 523



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 99/275 (36%), Positives = 129/275 (46%), Gaps = 55/275 (20%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI----------------T 99
           +N+ TL L  N L+ FP    +  NL+ L+L  NR+T LP+ I                T
Sbjct: 142 QNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLT 201

Query: 100 NFP-----LSTL----IARNNLLTAESLPKDMSNLKNLKVFNL----------------- 133
            FP     L  L    + RN L T    PK++  LKNL++ +L                 
Sbjct: 202 TFPKEIGQLKKLQDLGLGRNQLTT---FPKEIGQLKNLQMLDLCYNQFKTVSKEIGQLKN 258

Query: 134 ------SGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
                 S NQL   P +I  +  L+ L LG N L  +P+EI +L  L+ L LG N LT +
Sbjct: 259 LLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLTTL 318

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
           P   G L  L  L L  NQL + P  I  L+ L+ L L NN+L  LP EI  LK     L
Sbjct: 319 PKEIGQLKNLYNLGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLK----NL 374

Query: 248 KSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           ++L L  N+L T P EI  LK L +L L  N LVI
Sbjct: 375 ENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLVI 409



 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 95/227 (41%), Positives = 120/227 (52%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  P    +  NL++L LS N++T  P+ I     L  L  + N LT
Sbjct: 119 QNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELNLKWNRLT 178

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  LPK++  LKNL+   LS NQL  FP +I  +  L+ L LG N L   P+EI +L  L
Sbjct: 179 A--LPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLGRNQLTTFPKEIGQLKNL 236

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  N    +    G L  L  L LS NQL +LPA I  LK L+ L L  N+L TLP
Sbjct: 237 QMLDLCYNQFKTVSKEIGQLKNLLQLNLSYNQLATLPAEIGQLKKLQDLSLGRNQLTTLP 296

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  LK L     +L L  N+L TLP EI  LK L  L L  N L 
Sbjct: 297 KEIGQLKNLY----NLDLGTNQLTTLPKEIGQLKNLYNLGLGRNQLT 339



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 89/223 (39%), Positives = 117/223 (52%), Gaps = 11/223 (4%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
           +N L+  P    +   L+ L L  N++T LP+ I     L  L    N LT  +LPK++ 
Sbjct: 266 YNQLATLPAEIGQLKKLQDLSLGRNQLTTLPKEIGQLKNLYNLDLGTNQLT--TLPKEIG 323

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            LKNL    L  NQL  FP +I  +  L+ L L NN L  +P+EI +L  L  L L  N 
Sbjct: 324 QLKNLYNLGLGRNQLTTFPKEIGQLENLQELDLWNNRLTALPKEIGQLKNLENLELSENQ 383

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT  P   G L +L+ L LS N+L  LP  I  LK L++L L  N+L TLP EI  LK  
Sbjct: 384 LTTFPKEIGQLKKLQDLGLSYNRLVILPKEIGQLKNLQTLSLSYNRLTTLPKEIGQLK-- 441

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVS 286
              L++L L  N+L TLP EI  L+ L +L L  N    RF +
Sbjct: 442 --NLENLELSENRLATLPKEIGQLQNLQKLDLDTN----RFAT 478



 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 82/210 (39%), Positives = 110/210 (52%), Gaps = 7/210 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           EN+  L L++N L+  P    +  NL +L+LS N++T  P+ I     L  L    N L 
Sbjct: 349 ENLQELDLWNNRLTALPKEIGQLKNLENLELSENQLTTFPKEIGQLKKLQDLGLSYNRLV 408

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  LKNL+  +LS N+L   P +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 409 I--LPKEIGQLKNLQTLSLSYNRLTTLPKEIGQLKNLENLELSENRLATLPKEIGQLQNL 466

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N     P   G L  L  L L +NQL +LP  I+ LK L  L L+ N+L TLP
Sbjct: 467 QKLDLDTNRFATFPKEIGQLQNLYNLDLGNNQLTALPKEIAQLKNLYDLDLNTNQLTTLP 526

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
            EI  LK L     +L L  N+L TLP EI
Sbjct: 527 KEIGQLKNLY----NLGLGTNQLTTLPKEI 552



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/168 (40%), Positives = 88/168 (52%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  N++V NLSG      P +I  +  L+ L L +N L  +P EI +L  
Sbjct: 38  TYRDLTKALQNPLNVRVLNLSGQNFTTLPKEIEKLKNLQTLNLQDNQLATLPVEIGQLQN 97

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N LT +P   G L  L+ L L DNQL +LP  I  L+ L++L L  N+L T 
Sbjct: 98  LEKLNLRKNRLTVLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTF 157

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L    E L+ L L  N+L  LP EI  LK L  L L +N L 
Sbjct: 158 PKEIGQL----ENLQELNLKWNRLTALPKEIGQLKNLENLELSENQLT 201


>gi|194226479|ref|XP_001494647.2| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1-like
           [Equus caballus]
          Length = 1152

 Score =  118 bits (295), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 120/241 (49%), Gaps = 26/241 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTA------ 115
           L HN L   P       +L  LD+S NR+ HLP +++  + L TL   +N LTA      
Sbjct: 242 LSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLYRLRTLDVDHNQLTAFPRQLL 301

Query: 116 ---------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                            LP+D+S L+ LK+  LSG +L   P    ++ +L+ L L NN 
Sbjct: 302 QLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDNNG 361

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P + ++L +L +L+L  N   + P     L  LE L LS NQL S+P+ IS L  L
Sbjct: 362 LQALPAQFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLSRL 421

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DNPL
Sbjct: 422 LTLWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDNFGQLSRVGLWKIKDNPL 477

Query: 281 V 281
           +
Sbjct: 478 I 478



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 82/225 (36%), Positives = 113/225 (50%), Gaps = 8/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +I+ L L +N L   PD   S   +LR L L  NR   LP A+      L+ L   +N L
Sbjct: 164 DIEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 223

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA    + +S L+ L+  NLS NQL   P Q+  +  L+ L +  N L H+P  ++ L +
Sbjct: 224 TALGA-EVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLYR 282

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L +  N LT  P     L  LE L +S N+L  LP  IS L+ LK L L   +L TL
Sbjct: 283 LRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 342

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P+      C    L+SL+L NN L+ LP +   L+ L  L+L  N
Sbjct: 343 PSGF----CELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSN 383



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 85/173 (49%), Gaps = 3/173 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L   P++ S    L+ L LS   +  LP        L +L+  NN L A  LP   S 
Sbjct: 314 NRLRGLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLQA--LPAQFSR 371

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ LK+ NLS N  E+FP  +L +  L+ LYL  N L  VP  I+ L +L  L L  N +
Sbjct: 372 LQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLSRLLTLWLDNNRI 431

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
             +PD+  +L  LE L+L  NQ+  LP +   L  +    + +N L   P E+
Sbjct: 432 RYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEV 484



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 85/186 (45%), Gaps = 21/186 (11%)

Query: 103 LSTLIARNNLLTAESLPKDM-SNLKNLKVFNLSGNQLEQ-------FPIQILDIPTLKYL 154
           L TL+    +L AE     + SNL+ L +     + ++         P  I DI   + L
Sbjct: 112 LHTLVGARRILAAEGARDQLRSNLRQLTLSAAGADPIDSPDAPQLVLPANIGDI---EVL 168

Query: 155 YLGNNSLNHVPREIN-KLCKLHVLSLGGNSLTDIPDTFGDL-YQLEALILSDNQLESLPA 212
            LGNN L  VP  +   L  L VL L  N    +P    +L + L  L +S N+L +L A
Sbjct: 169 NLGNNGLEEVPDGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTALGA 228

Query: 213 S-ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             +S L+ L+ L L +N+L  LP ++  L  L E    L +  N+L  LP    +L CL 
Sbjct: 229 EVVSALRELRKLNLSHNQLPALPAQLGALAHLEE----LDVSFNRLAHLPD---SLSCLY 281

Query: 272 ELSLRD 277
            L   D
Sbjct: 282 RLRTLD 287


>gi|427725244|ref|YP_007072521.1| adenylate cyclase [Leptolyngbya sp. PCC 7376]
 gi|427356964|gb|AFY39687.1| Adenylate cyclase [Leptolyngbya sp. PCC 7376]
          Length = 287

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 87/225 (38%), Positives = 120/225 (53%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L HN ++  P++ ++ TNL +L LS NRIT + +AI     L+ LI +NN +  
Sbjct: 44  NLTRLELDHNRITEVPESIAQLTNLTTLYLSENRITEISEAIAPLRNLTMLILKNNQIA- 102

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+ ++ L NL   NLS NQL +    I  +  L  L L  N L  +P  I KL KL 
Sbjct: 103 -KIPEAIAQLTNLTTLNLSHNQLTEISEAIAQLTNLTTLSLSYNQLTEIPEAITKLTKLT 161

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L LG N LT+IP     L  L  L+L  NQ+  +P +I+ L  LK L L NN++  +P 
Sbjct: 162 SLRLGRNHLTEIPKEISQLANLTELLLYKNQITKVPKAITQLTNLKMLSLFNNQITEIPE 221

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            I  L      L++L L  N+L T+P  I  L  L  LSL  NPL
Sbjct: 222 AIAQLT----NLETLDLSYNQLTTIPESISQLTNLVILSLYQNPL 262



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/172 (37%), Positives = 91/172 (52%), Gaps = 11/172 (6%)

Query: 45  LLPNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI 98
           +L NN   K PE      N+ TL L HN L+   +  ++ TNL +L LS N++T +P+AI
Sbjct: 95  ILKNNQIAKIPEAIAQLTNLTTLNLSHNQLTEISEAIAQLTNLTTLSLSYNQLTEIPEAI 154

Query: 99  TNFP-LSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL 156
           T    L++L + RN+L     +PK++S L NL    L  NQ+ + P  I  +  LK L L
Sbjct: 155 TKLTKLTSLRLGRNHL---TEIPKEISQLANLTELLLYKNQITKVPKAITQLTNLKMLSL 211

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLE 208
            NN +  +P  I +L  L  L L  N LT IP++   L  L  L L  N L+
Sbjct: 212 FNNQITEIPEAIAQLTNLETLDLSYNQLTTIPESISQLTNLVILSLYQNPLD 263



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 57/174 (32%), Positives = 83/174 (47%), Gaps = 6/174 (3%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           +P+ ++ L NL    L  N++ + P  I  +  L  LYL  N +  +   I  L  L +L
Sbjct: 35  VPESVAQLTNLTRLELDHNRITEVPESIAQLTNLTTLYLSENRITEISEAIAPLRNLTML 94

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            L  N +  IP+    L  L  L LS NQL  +  +I+ L  L +L L  N+L  +P  I
Sbjct: 95  ILKNNQIAKIPEAIAQLTNLTTLNLSHNQLTEISEAIAQLTNLTTLSLSYNQLTEIPEAI 154

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL--VIRFVSDMT 289
             L     KL SL L  N L  +P EI  L  L+EL L  N +  V + ++ +T
Sbjct: 155 TKLT----KLTSLRLGRNHLTEIPKEISQLANLTELLLYKNQITKVPKAITQLT 204



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 4/121 (3%)

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
           +L  VP  + +L  L  L L  N +T++P++   L  L  L LS+N++  +  +I+ L+ 
Sbjct: 31  ALTEVPESVAQLTNLTRLELDHNRITEVPESIAQLTNLTTLYLSENRITEISEAIAPLRN 90

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L  L+L NN++  +P  I  L  L+    +L L +N+L  +   I  L  L+ LSL  N 
Sbjct: 91  LTMLILKNNQIAKIPEAIAQLTNLT----TLNLSHNQLTEISEAIAQLTNLTTLSLSYNQ 146

Query: 280 L 280
           L
Sbjct: 147 L 147


>gi|322510775|gb|ADX06089.1| putative leucine-rich repeat ribonuclease inhibitor family protein
           [Organic Lake phycodnavirus 1]
          Length = 598

 Score =  118 bits (295), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 84/243 (34%), Positives = 131/243 (53%), Gaps = 13/243 (5%)

Query: 46  LPNNDYNKKPENIDTLLLYH------NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           + +N  N+ PE+I  L+         N L+  P+N      +RSL + +N +T LP +I 
Sbjct: 98  IEDNWLNQLPESIGNLIELEILNVNLNRLTLLPENIGNIKKMRSLYIESNELTLLPVSIG 157

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L  L   +N L+   +P+ + NL NL++ ++  N+L Q P  I  +  LK L +GN
Sbjct: 158 GLQNLEQLFTSSNRLS--QIPESICNLTNLQMLDIKDNELTQLPKHIGKLRKLKKLDIGN 215

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L+ +P  I  L  L +L +G N L+++P++  +L  L+ L + +NQL  LP SI+NL 
Sbjct: 216 NELSELPESITNLTHLQMLDIGYNELSELPESISNLTNLQELYIENNQLTQLPESITNLT 275

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+ L +HNN+L  LP  I  L      L+ L + NNKL  LP  I  L  L +L +++N
Sbjct: 276 NLRMLYIHNNQLSQLPLRIGNLT----HLQILAIANNKLSELPERISNLTNLQKLYIQNN 331

Query: 279 PLV 281
            L 
Sbjct: 332 QLT 334



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 122/225 (54%), Gaps = 7/225 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N++ L    N LS  P++    TNL+ LD+ +N +T LP+ I     L  L   NN L+
Sbjct: 160 QNLEQLFTSSNRLSQIPESICNLTNLQMLDIKDNELTQLPKHIGKLRKLKKLDIGNNELS 219

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP+ ++NL +L++ ++  N+L + P  I ++  L+ LY+ NN L  +P  I  L  L
Sbjct: 220 --ELPESITNLTHLQMLDIGYNELSELPESISNLTNLQELYIENNQLTQLPESITNLTNL 277

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L +  N L+ +P   G+L  L+ L +++N+L  LP  ISNL  L+ L + NN+L  LP
Sbjct: 278 RMLYIHNNQLSQLPLRIGNLTHLQILAIANNKLSELPERISNLTNLQKLYIQNNQLTRLP 337

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
             I  L      LK L + NN+L  +P  I  L  L  L L +NP
Sbjct: 338 LRIGNLT----NLKVLDIKNNQLTQIPESISNLTNLETLVLTNNP 378



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 82/232 (35%), Positives = 120/232 (51%), Gaps = 7/232 (3%)

Query: 50  DYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIA 108
           ++NK+ +N+ +  L +N LS  PD+     +L+ LD+ NN +  LP +I N   L  L  
Sbjct: 16  EFNKELQNVISFNLANNELSTIPDSIGNLIHLQQLDIRNNELGQLPDSIGNLIHLQQLDI 75

Query: 109 RNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREI 168
           RNN L    LP  + NL +L+  ++  N L Q P  I ++  L+ L +  N L  +P  I
Sbjct: 76  RNNELG--QLPDSIGNLIHLQQLDIEDNWLNQLPESIGNLIELEILNVNLNRLTLLPENI 133

Query: 169 NKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
             + K+  L +  N LT +P + G L  LE L  S N+L  +P SI NL  L+ L + +N
Sbjct: 134 GNIKKMRSLYIESNELTLLPVSIGGLQNLEQLFTSSNRLSQIPESICNLTNLQMLDIKDN 193

Query: 229 KLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +L  LP  I  L+    KLK L + NN+L  LP  I  L  L  L +  N L
Sbjct: 194 ELTQLPKHIGKLR----KLKKLDIGNNELSELPESITNLTHLQMLDIGYNEL 241



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/134 (36%), Positives = 73/134 (54%), Gaps = 3/134 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L + +N L+  P++ +  TNLR L + NN+++ LP  I N   L  L   NN L+ 
Sbjct: 253 NLQELYIENNQLTQLPESITNLTNLRMLYIHNNQLSQLPLRIGNLTHLQILAIANNKLS- 311

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+ +SNL NL+   +  NQL + P++I ++  LK L + NN L  +P  I+ L  L 
Sbjct: 312 -ELPERISNLTNLQKLYIQNNQLTRLPLRIGNLTNLKVLDIKNNQLTQIPESISNLTNLE 370

Query: 176 VLSLGGNSLTDIPD 189
            L L  N    IPD
Sbjct: 371 TLVLTNNPNLFIPD 384


>gi|456889972|gb|EMG00842.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 290

 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 91/229 (39%), Positives = 120/229 (52%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P +   L L  N L   P    +  NL  L+L  N++  LP+ I N   L  L +  N L
Sbjct: 54  PMDARALYLNGNELKTLPKEIGELQNLEHLNLWKNKLRTLPKEIGNLQNLKVLDSGLNEL 113

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +LPK++  L+NL    L  N+ +  P +I ++  L  L L  N    +P+EI  L K
Sbjct: 114 T--TLPKEIGELQNLDHLELRYNKFKTLPKEIGNLQNLGLLDLEKNKFKTLPKEIWNLQK 171

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L VL+L  N L  +P   G+L  L  L LSDNQL +LP  I NL+ L+ L L  N+L TL
Sbjct: 172 LQVLNLSHNKLKTLPKEIGELQNLRYLNLSDNQLMTLPKEIGNLQNLQELHLSGNQLMTL 231

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  L+ L E    L L  N+L TLP EI  L+ L EL L  N L+I
Sbjct: 232 PKEIGNLQNLQE----LHLSGNQLMTLPKEIGNLQNLQELHLSGNQLMI 276



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 8/216 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L+ N L   P       NL+ LD   N +T LP+ I     L  L  R N   
Sbjct: 78  QNLEHLNLWKNKLRTLPKEIGNLQNLKVLDSGLNELTTLPKEIGELQNLDHLELRYN--K 135

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            ++LPK++ NL+NL + +L  N+ +  P +I ++  L+ L L +N L  +P+EI +L  L
Sbjct: 136 FKTLPKEIGNLQNLGLLDLEKNKFKTLPKEIWNLQKLQVLNLSHNKLKTLPKEIGELQNL 195

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N L  +P   G+L  L+ L LS NQL +LP  I NL+ L+ L L  N+L TLP
Sbjct: 196 RYLNLSDNQLMTLPKEIGNLQNLQELHLSGNQLMTLPKEIGNLQNLQELHLSGNQLMTLP 255

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
            EI  L+ L E    L L  N+L  +P EI   K L
Sbjct: 256 KEIGNLQNLQE----LHLSGNQL-MIPKEIWNSKKL 286



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 96/165 (58%), Gaps = 4/165 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +L K + N  + +   L+GN+L+  P +I ++  L++L L  N L  +P+EI  L  L V
Sbjct: 46  NLAKALQNPMDARALYLNGNELKTLPKEIGELQNLEHLNLWKNKLRTLPKEIGNLQNLKV 105

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L  G N LT +P   G+L  L+ L L  N+ ++LP  I NL+ L  L L  NK +TLP E
Sbjct: 106 LDSGLNELTTLPKEIGELQNLDHLELRYNKFKTLPKEIGNLQNLGLLDLEKNKFKTLPKE 165

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I  L    +KL+ L L +NKL+TLP EI  L+ L  L+L DN L+
Sbjct: 166 IWNL----QKLQVLNLSHNKLKTLPKEIGELQNLRYLNLSDNQLM 206



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 105/190 (55%), Gaps = 5/190 (2%)

Query: 92  THLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
           T+L +A+ N P+       N    ++LPK++  L+NL+  NL  N+L   P +I ++  L
Sbjct: 45  TNLAKALQN-PMDARALYLNGNELKTLPKEIGELQNLEHLNLWKNKLRTLPKEIGNLQNL 103

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           K L  G N L  +P+EI +L  L  L L  N    +P   G+L  L  L L  N+ ++LP
Sbjct: 104 KVLDSGLNELTTLPKEIGELQNLDHLELRYNKFKTLPKEIGNLQNLGLLDLEKNKFKTLP 163

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             I NL+ L+ L L +NKL+TLP EI  L    + L+ L L +N+L TLP EI  L+ L 
Sbjct: 164 KEIWNLQKLQVLNLSHNKLKTLPKEIGEL----QNLRYLNLSDNQLMTLPKEIGNLQNLQ 219

Query: 272 ELSLRDNPLV 281
           EL L  N L+
Sbjct: 220 ELHLSGNQLM 229


>gi|421092601|ref|ZP_15553333.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410364452|gb|EKP15473.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
          Length = 300

 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 91/229 (39%), Positives = 120/229 (52%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P +   L L  N L   P    +  NL  L+L  N++  LP+ I N   L  L +  N L
Sbjct: 64  PMDARALYLNGNELKTLPKEIGELQNLEHLNLWKNKLRTLPKEIGNLQNLKVLDSGLNEL 123

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +LPK++  L+NL    L  N+ +  P +I ++  L  L L  N    +P+EI  L K
Sbjct: 124 T--TLPKEIGELQNLDHLELRYNKFKTLPKEIGNLQNLGLLDLEKNKFKTLPKEIWNLQK 181

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L VL+L  N L  +P   G+L  L  L LSDNQL +LP  I NL+ L+ L L  N+L TL
Sbjct: 182 LQVLNLSHNKLKTLPKEIGELQNLRYLNLSDNQLMTLPKEIGNLQNLQELHLSGNQLMTL 241

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  L+ L E    L L  N+L TLP EI  L+ L EL L  N L+I
Sbjct: 242 PKEIGNLQNLQE----LHLSGNQLMTLPKEIGNLQNLQELHLSGNQLMI 286



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 81/216 (37%), Positives = 116/216 (53%), Gaps = 8/216 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L+ N L   P       NL+ LD   N +T LP+ I     L  L  R N   
Sbjct: 88  QNLEHLNLWKNKLRTLPKEIGNLQNLKVLDSGLNELTTLPKEIGELQNLDHLELRYN--K 145

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            ++LPK++ NL+NL + +L  N+ +  P +I ++  L+ L L +N L  +P+EI +L  L
Sbjct: 146 FKTLPKEIGNLQNLGLLDLEKNKFKTLPKEIWNLQKLQVLNLSHNKLKTLPKEIGELQNL 205

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N L  +P   G+L  L+ L LS NQL +LP  I NL+ L+ L L  N+L TLP
Sbjct: 206 RYLNLSDNQLMTLPKEIGNLQNLQELHLSGNQLMTLPKEIGNLQNLQELHLSGNQLMTLP 265

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
            EI  L+ L E    L L  N+L  +P EI   K L
Sbjct: 266 KEIGNLQNLQE----LHLSGNQL-MIPKEIWNSKKL 296



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 96/165 (58%), Gaps = 4/165 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +L K + N  + +   L+GN+L+  P +I ++  L++L L  N L  +P+EI  L  L V
Sbjct: 56  NLAKALQNPMDARALYLNGNELKTLPKEIGELQNLEHLNLWKNKLRTLPKEIGNLQNLKV 115

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L  G N LT +P   G+L  L+ L L  N+ ++LP  I NL+ L  L L  NK +TLP E
Sbjct: 116 LDSGLNELTTLPKEIGELQNLDHLELRYNKFKTLPKEIGNLQNLGLLDLEKNKFKTLPKE 175

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I  L    +KL+ L L +NKL+TLP EI  L+ L  L+L DN L+
Sbjct: 176 IWNL----QKLQVLNLSHNKLKTLPKEIGELQNLRYLNLSDNQLM 216



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 105/190 (55%), Gaps = 5/190 (2%)

Query: 92  THLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
           T+L +A+ N P+       N    ++LPK++  L+NL+  NL  N+L   P +I ++  L
Sbjct: 55  TNLAKALQN-PMDARALYLNGNELKTLPKEIGELQNLEHLNLWKNKLRTLPKEIGNLQNL 113

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           K L  G N L  +P+EI +L  L  L L  N    +P   G+L  L  L L  N+ ++LP
Sbjct: 114 KVLDSGLNELTTLPKEIGELQNLDHLELRYNKFKTLPKEIGNLQNLGLLDLEKNKFKTLP 173

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             I NL+ L+ L L +NKL+TLP EI  L    + L+ L L +N+L TLP EI  L+ L 
Sbjct: 174 KEIWNLQKLQVLNLSHNKLKTLPKEIGEL----QNLRYLNLSDNQLMTLPKEIGNLQNLQ 229

Query: 272 ELSLRDNPLV 281
           EL L  N L+
Sbjct: 230 ELHLSGNQLM 239


>gi|418735838|ref|ZP_13292243.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|410748566|gb|EKR01465.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 306

 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 95/232 (40%), Positives = 125/232 (53%), Gaps = 17/232 (7%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI---TNFPLSTLIARNN 111
           P ++  L L    L+  P    +  NLR L L NN++T LP+ I    N  +  L A  N
Sbjct: 44  PLDVRVLDLREQKLTILPKEIWQLKNLRELRLDNNQLTTLPKEIGLLQNLKILHLYA--N 101

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT   LPK++  LKNL+  +L+ NQL   P +I  +  LK L+L  N L  +P+EI +L
Sbjct: 102 QLTI--LPKEIGQLKNLEYLDLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEIWQL 159

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L L GNS T +P   G L  L  LIL  +QL++LP  I  LK L+ L L NN+L 
Sbjct: 160 KNLEDLDLSGNSFTILPKEIGQLKNLGELILEHSQLKTLPKEIGQLKDLQHLSLRNNQLT 219

Query: 232 TLPTEIITLKCLSEKLKSLLL---HNNKLRTLPTEIITLKCLSELSLRDNPL 280
            LP EI       E+LK+LL     NN+L  LP EI  L+ L  L LR+N L
Sbjct: 220 ILPKEI-------EQLKNLLTLSSDNNQLTVLPKEIGLLQNLVTLDLRNNQL 264



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 85/204 (41%), Positives = 112/204 (54%), Gaps = 7/204 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           ++R LDL   ++T LP+ I     L  L   NN LT  +LPK++  L+NLK+ +L  NQL
Sbjct: 46  DVRVLDLREQKLTILPKEIWQLKNLRELRLDNNQLT--TLPKEIGLLQNLKILHLYANQL 103

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
              P +I  +  L+YL L NN L  +P+EI  L  L +L L  N LT +P     L  LE
Sbjct: 104 TILPKEIGQLKNLEYLDLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPKEIWQLKNLE 163

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L LS N    LP  I  LK L  L+L +++L+TLP EI  LK     L+ L L NN+L 
Sbjct: 164 DLDLSGNSFTILPKEIGQLKNLGELILEHSQLKTLPKEIGQLK----DLQHLSLRNNQLT 219

Query: 259 TLPTEIITLKCLSELSLRDNPLVI 282
            LP EI  LK L  LS  +N L +
Sbjct: 220 ILPKEIEQLKNLLTLSSDNNQLTV 243



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/191 (39%), Positives = 102/191 (53%), Gaps = 7/191 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI---TNFPLSTLIARNNL 112
           +N+  L LY N L+  P    +  NL  LDL+NN++T LP+ I    N  +  L A  N 
Sbjct: 91  QNLKILHLYANQLTILPKEIGQLKNLEYLDLNNNQLTTLPKEIGLLQNLKILHLYA--NQ 148

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT   LPK++  LKNL+  +LSGN     P +I  +  L  L L ++ L  +P+EI +L 
Sbjct: 149 LTV--LPKEIWQLKNLEDLDLSGNSFTILPKEIGQLKNLGELILEHSQLKTLPKEIGQLK 206

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  LSL  N LT +P     L  L  L   +NQL  LP  I  L+ L +L L NN+L T
Sbjct: 207 DLQHLSLRNNQLTILPKEIEQLKNLLTLSSDNNQLTVLPKEIGLLQNLVTLDLRNNQLET 266

Query: 233 LPTEIITLKCL 243
           LP E+  LK L
Sbjct: 267 LPKEVGQLKNL 277



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 70/186 (37%), Positives = 98/186 (52%), Gaps = 19/186 (10%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++L K + N  +++V +L   +L   P +I  +  L+ L L NN L  +P+EI  L  L 
Sbjct: 35  KALTKALQNPLDVRVLDLREQKLTILPKEIWQLKNLRELRLDNNQLTTLPKEIGLLQNLK 94

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L L  N LT +P   G L  LE L L++NQL +LP  I  L+ LK L L+ N+L  LP 
Sbjct: 95  ILHLYANQLTILPKEIGQLKNLEYLDLNNNQLTTLPKEIGLLQNLKILHLYANQLTVLPK 154

Query: 236 EIITLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           EI  LK L +                    L  L+L +++L+TLP EI  LK L  LSLR
Sbjct: 155 EIWQLKNLEDLDLSGNSFTILPKEIGQLKNLGELILEHSQLKTLPKEIGQLKDLQHLSLR 214

Query: 277 DNPLVI 282
           +N L I
Sbjct: 215 NNQLTI 220


>gi|403268883|ref|XP_003926491.1| PREDICTED: leucine-rich repeat-containing protein 1 [Saimiri
           boliviensis boliviensis]
          Length = 547

 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 122/226 (53%), Gaps = 7/226 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I  LP++I     L  L    N L+ 
Sbjct: 175 NLTSLELRENLLTYLPDSLTQLRRLEELDLGNNEIHSLPESIGALLCLKDLWLDGNQLS- 233

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 234 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLS 292

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+  GD   L  L+L++NQL +LP SI  LK L +L    NKL +LP 
Sbjct: 293 ILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPK 352

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           EI    C S  L    L +N+L  +P E+     L  L L  N L+
Sbjct: 353 EIG--GCCS--LTVFCLRDNRLTRIPAEVSQATELHVLDLAGNRLL 394



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 125/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N++   P++ S    L+  D S N +  LP++  
Sbjct: 89  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLMRLPKSFP 148

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 149 ELENLTCLSVNDV-SLQSLPENIGNLYNLTSLELRENLLTYLPDSLTQLRRLEELDLGNN 207

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            ++ +P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 208 EIHSLPESIGALLCLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 267

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTL 260
           L  L++  N L T+P  I  LK LS                   E L  L+L  N+L TL
Sbjct: 268 LTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTL 327

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK LS L+   N LV
Sbjct: 328 PKSIGKLKKLSNLNADRNKLV 348



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 106/204 (51%), Gaps = 9/204 (4%)

Query: 77  KFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTAESLPKDMSNLKNLKVFNLS 134
           +   LR L LS+N I  LP  I NF  L  L ++RN++     +P+ +S  K L++ + S
Sbjct: 80  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDI---PEIPESISFCKALQIADFS 136

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
           GN L + P    ++  L  L + + SL  +P  I  L  L  L L  N LT +PD+   L
Sbjct: 137 GNPLMRLPKSFPELENLTCLSVNDVSLQSLPENIGNLYNLTSLELRENLLTYLPDSLTQL 196

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
            +LE L L +N++ SLP SI  L  LK L L  N+L  LP EI  LK     L  L +  
Sbjct: 197 RRLEELDLGNNEIHSLPESIGALLCLKDLWLDGNQLSELPQEIGNLK----NLLCLDVSE 252

Query: 255 NKLRTLPTEIITLKCLSELSLRDN 278
           N+L  LP EI  L  L++L +  N
Sbjct: 253 NRLERLPEEISGLTSLTDLVISQN 276



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 80/156 (51%), Gaps = 4/156 (2%)

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L  L+   LS N++++ P +I +   L  L +  N +  +P  I+    L +    GN L
Sbjct: 81  LVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPL 140

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
             +P +F +L  L  L ++D  L+SLP +I NL  L SL L  N L  LP  +  L+   
Sbjct: 141 MRLPKSFPELENLTCLSVNDVSLQSLPENIGNLYNLTSLELRENLLTYLPDSLTQLR--- 197

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L+ L L NN++ +LP  I  L CL +L L  N L
Sbjct: 198 -RLEELDLGNNEIHSLPESIGALLCLKDLWLDGNQL 232



 Score = 38.5 bits (88), Expect = 6.5,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 60/140 (42%), Gaps = 31/140 (22%)

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS------ 244
           F  L +L  L LSDN+++ LP  I+N   L  L +  N +  +P  I   K L       
Sbjct: 78  FFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSG 137

Query: 245 -------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYK 291
                        E L  L +++  L++LP  I  L  L+ L LR+N L        TY 
Sbjct: 138 NPLMRLPKSFPELENLTCLSVNDVSLQSLPENIGNLYNLTSLELRENLL--------TYL 189

Query: 292 PPSLLELASRTLKVHEIDYS 311
           P SL +L     ++ E+D  
Sbjct: 190 PDSLTQLR----RLEELDLG 205


>gi|255070739|ref|XP_002507451.1| predicted protein [Micromonas sp. RCC299]
 gi|226522726|gb|ACO68709.1| predicted protein [Micromonas sp. RCC299]
          Length = 395

 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 122/227 (53%), Gaps = 7/227 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           +++ L L++N+L+  P    + T+L+ L L  N++T LP  I     L  L    N LT 
Sbjct: 173 SLERLRLHNNHLTSVPAEIGQLTSLKVLGLGGNQLTSLPAEIGRLTSLQELWLNGNQLT- 231

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SL  ++  L  L+  +LS NQL + P++I  +  L+ LYL +N L  VP E+ +   L 
Sbjct: 232 -SLLAEIGQLTALEKLHLSRNQLTRVPVEIGQLTALRELYLQHNQLTSVPAEVGQHRSLK 290

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           VLSL  N LT +P   G L  L+ L L +NQL S+PA I  L  L+ L L+NN+L  +P 
Sbjct: 291 VLSLYNNQLTSVPAEIGQLGWLKVLYLHNNQLTSVPAEIGQLTSLQELFLYNNQLTRVPA 350

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           EI  L+     L+ L L+ N+L  LP  +  L+    +   DN + +
Sbjct: 351 EIGQLR----SLERLDLNRNQLTRLPAALCKLRATCCIVRLDNRVTV 393



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 89/164 (54%), Gaps = 4/164 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++P ++  L  LK   L  N+L   P +I  + +L+ L L NN L  VP EI +L  L V
Sbjct: 140 AVPAEVGRLSALKTLELWQNRLTSVPAEIGQLTSLERLRLHNNHLTSVPAEIGQLTSLKV 199

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L LGGN LT +P   G L  L+ L L+ NQL SL A I  L  L+ L L  N+L  +P E
Sbjct: 200 LGLGGNQLTSLPAEIGRLTSLQELWLNGNQLTSLLAEIGQLTALEKLHLSRNQLTRVPVE 259

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L  L E    L L +N+L ++P E+   + L  LSL +N L
Sbjct: 260 IGQLTALRE----LYLQHNQLTSVPAEVGQHRSLKVLSLYNNQL 299


>gi|124002029|ref|ZP_01686883.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123992495|gb|EAY31840.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 395

 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 85/237 (35%), Positives = 121/237 (51%), Gaps = 25/237 (10%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
           +N L   P +  K T L+ +DL  N++T +P  I     L  L    N ++  ++P  + 
Sbjct: 128 YNKLVKLPKSIKKLTQLQVIDLEGNKLTRIPSEIGALKSLRVLDLEKNGIS--TIPSQLG 185

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           NL  L+V +L  NQ++Q P  I  + +LKYLYL NN ++ +P E+  + KL  L +  N 
Sbjct: 186 NLSQLEVLDLDSNQIKQIPYAIGGLRSLKYLYLRNNLIDSLPDELKNMVKLEHLYVSNNR 245

Query: 184 LTD---IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           L          G L  L+ L LS N+L  LP  I  LK LK+L+LHNN+L+ LP  +  +
Sbjct: 246 LDSSFAKSRFLGKLQSLKTLDLSKNKLVRLPQDIVQLKNLKTLILHNNQLQALPDSLGEI 305

Query: 241 KCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           + L E                   KLK L+L NN+L  LP EI  +K L EL LR N
Sbjct: 306 ENLEELDLRNNQLTVLPKSVLQLAKLKKLILRNNQLTVLPEEIAQMKNLKELDLRGN 362



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 130/242 (53%), Gaps = 18/242 (7%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L+ + +++ PD      +L+ L +  N++  LP++I     L  +    N LT   +P +
Sbjct: 103 LWGDKIAYLPDTIGNLVHLKFLYMDYNKLVKLPKSIKKLTQLQVIDLEGNKLT--RIPSE 160

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  LK+L+V +L  N +   P Q+ ++  L+ L L +N +  +P  I  L  L  L L  
Sbjct: 161 IGALKSLRVLDLEKNGISTIPSQLGNLSQLEVLDLDSNQIKQIPYAIGGLRSLKYLYLRN 220

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPAS---ISNLKMLKSLLLHNNKLRTLPTEII 238
           N +  +PD   ++ +LE L +S+N+L+S  A    +  L+ LK+L L  NKL  LP +I+
Sbjct: 221 NLIDSLPDELKNMVKLEHLYVSNNRLDSSFAKSRFLGKLQSLKTLDLSKNKLVRLPQDIV 280

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLEL 298
            LK     LK+L+LHNN+L+ LP  +  ++ L EL LR+N L        T  P S+L+L
Sbjct: 281 QLK----NLKTLILHNNQLQALPDSLGEIENLEELDLRNNQL--------TVLPKSVLQL 328

Query: 299 AS 300
           A 
Sbjct: 329 AK 330



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/187 (36%), Positives = 100/187 (53%), Gaps = 6/187 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L  N +S  P      + L  LDL +N+I  +P AI     L  L  RNNL+  +SLP +
Sbjct: 172 LEKNGISTIPSQLGNLSQLEVLDLDSNQIKQIPYAIGGLRSLKYLYLRNNLI--DSLPDE 229

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQ---ILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           + N+  L+   +S N+L+    +   +  + +LK L L  N L  +P++I +L  L  L 
Sbjct: 230 LKNMVKLEHLYVSNNRLDSSFAKSRFLGKLQSLKTLDLSKNKLVRLPQDIVQLKNLKTLI 289

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           L  N L  +PD+ G++  LE L L +NQL  LP S+  L  LK L+L NN+L  LP EI 
Sbjct: 290 LHNNQLQALPDSLGEIENLEELDLRNNQLTVLPKSVLQLAKLKKLILRNNQLTVLPEEIA 349

Query: 239 TLKCLSE 245
            +K L E
Sbjct: 350 QMKNLKE 356



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/262 (29%), Positives = 121/262 (46%), Gaps = 40/262 (15%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM 122
           L +  L   P    K   L+ LDL  N+I  LP  I                        
Sbjct: 57  LKNKGLKKVPKEIGKLKKLQMLDLGLNQIDTLPPCI------------------------ 92

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
            +LK L++ +L G+++   P  I ++  LK+LY+  N L  +P+ I KL +L V+ L GN
Sbjct: 93  GSLKFLQILDLWGDKIAYLPDTIGNLVHLKFLYMDYNKLVKLPKSIKKLTQLQVIDLEGN 152

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            LT IP   G L  L  L L  N + ++P+ + NL  L+ L L +N+++ +P  I  L+ 
Sbjct: 153 KLTRIPSEIGALKSLRVLDLEKNGISTIPSQLGNLSQLEVLDLDSNQIKQIPYAIGGLRS 212

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRT 302
               LK L L NN + +LP E+  +  L  L + +N L      D ++     L    + 
Sbjct: 213 ----LKYLYLRNNLIDSLPDELKNMVKLEHLYVSNNRL------DSSFAKSRFL---GKL 259

Query: 303 LKVHEIDYSQE---HLPQNLVQ 321
             +  +D S+     LPQ++VQ
Sbjct: 260 QSLKTLDLSKNKLVRLPQDIVQ 281



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 41/123 (33%), Positives = 59/123 (47%), Gaps = 19/123 (15%)

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
           ++LSL    L  +P   G L +L+ L L  NQ+++LP  I +LK L+ L L  +K+  LP
Sbjct: 53  YLLSLKNKGLKKVPKEIGKLKKLQMLDLGLNQIDTLPPCIGSLKFLQILDLWGDKIAYLP 112

Query: 235 TEI---ITLKCLS----------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
             I   + LK L                  +L+ + L  NKL  +P+EI  LK L  L L
Sbjct: 113 DTIGNLVHLKFLYMDYNKLVKLPKSIKKLTQLQVIDLEGNKLTRIPSEIGALKSLRVLDL 172

Query: 276 RDN 278
             N
Sbjct: 173 EKN 175


>gi|295860479|gb|ADG55416.1| CG32687 [Drosophila melanogaster]
 gi|295860481|gb|ADG55417.1| CG32687 [Drosophila melanogaster]
 gi|295860485|gb|ADG55419.1| CG32687 [Drosophila melanogaster]
 gi|295860487|gb|ADG55420.1| CG32687 [Drosophila melanogaster]
 gi|295860489|gb|ADG55421.1| CG32687 [Drosophila melanogaster]
 gi|295860497|gb|ADG55425.1| CG32687 [Drosophila melanogaster]
 gi|295860499|gb|ADG55426.1| CG32687 [Drosophila melanogaster]
 gi|295860501|gb|ADG55427.1| CG32687 [Drosophila melanogaster]
 gi|295860505|gb|ADG55429.1| CG32687 [Drosophila melanogaster]
 gi|295860507|gb|ADG55430.1| CG32687 [Drosophila melanogaster]
 gi|295860513|gb|ADG55433.1| CG32687 [Drosophila melanogaster]
 gi|295860517|gb|ADG55435.1| CG32687 [Drosophila melanogaster]
 gi|295860519|gb|ADG55436.1| CG32687 [Drosophila melanogaster]
 gi|295860521|gb|ADG55437.1| CG32687 [Drosophila melanogaster]
 gi|295860523|gb|ADG55438.1| CG32687 [Drosophila melanogaster]
          Length = 178

 Score =  117 bits (294), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 78/177 (44%), Positives = 99/177 (55%), Gaps = 19/177 (10%)

Query: 10  SSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLS 69
           +SDSSD+DS +    KTLDF   SLD  TL   +   P     K   +I+T+LL HN L 
Sbjct: 5   TSDSSDTDSREQ---KTLDFGRMSLDLVTLEDHLAS-PQKALLKSSGDIETMLLNHNRLV 60

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM------- 122
             P    +F NL+ LDLS+N IT LP A+   PL TLIA+NNLLT  SLPK +       
Sbjct: 61  GLPRLLLQFGNLKILDLSSNAITTLPDAVCQLPLVTLIAKNNLLTNASLPKSLLTKMANG 120

Query: 123 --------SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
                        LK  NLSGNQL  FP Q+ ++  LKYLYLG N ++ V ++I K+
Sbjct: 121 NGNGNATGGTNSTLKELNLSGNQLTHFPEQVTELRHLKYLYLGGNKISSVSKDIWKM 177


>gi|417781290|ref|ZP_12429042.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778541|gb|EKR63167.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 591

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 92/228 (40%), Positives = 120/228 (52%), Gaps = 9/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ +L LY N L+ FP    +  NL+ L+LS NR+T LP+ I     L  L    N LT
Sbjct: 301 QNLQSLYLYGNQLTAFPKEIEQLQNLQILNLSYNRLTTLPEEIGQLQNLQILNLSYNQLT 360

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NLK  +L   Q+  FP +IL +  L+ L      L  +P EI ++  L
Sbjct: 361 --KLPKELGKLRNLKTLDLHAIQITTFPKEILQLQNLEKLNWSRTQLTTLPGEIGQMQNL 418

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDN--QLESLPASISNLKMLKSLLLHNNKLRT 232
             L+L  N LT +P   G L  LE L L+ N  Q  SLP  I  L  LK+L L +N L  
Sbjct: 419 KELNLEKNQLTALPKEIGRLQNLEELNLNSNSNQFSSLPKEIGQLSNLKNLHLDHNMLAN 478

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           LP EI  L     +L++L L  N L TLP EI  L  L EL L  NPL
Sbjct: 479 LPKEIGQLS----RLETLTLFRNSLETLPEEIGQLWNLRELDLSYNPL 522



 Score =  110 bits (276), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 119/227 (52%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +   L+ LDL  N++T LP+ I     L TL    N LT
Sbjct: 209 QNLQALNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLLANQLT 268

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP+++  L+NL+   L  N+    P  I  +  L+ LYL  N L   P+EI +L  L
Sbjct: 269 I--LPEEIGKLRNLQKLYLCENRFTTLPKDIGQLQNLQSLYLYGNQLTAFPKEIEQLQNL 326

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L+L  N LT +P+  G L  L+ L LS NQL  LP  +  L+ LK+L LH  ++ T P
Sbjct: 327 QILNLSYNRLTTLPEEIGQLQNLQILNLSYNQLTKLPKELGKLRNLKTLDLHAIQITTFP 386

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI+ L+ L EKL        +L TLP EI  ++ L EL+L  N L 
Sbjct: 387 KEILQLQNL-EKLN---WSRTQLTTLPGEIGQMQNLKELNLEKNQLT 429



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 91/258 (35%), Positives = 130/258 (50%), Gaps = 10/258 (3%)

Query: 29  FSYSSLDSETLATQIELLPNNDYNKKPEN---IDTLLLYHNNLSFFPDNASKFTNLRSLD 85
           F  +   +E  A ++E     D  K  +N   +  L L    LS  P    +  NL++LD
Sbjct: 18  FILACFFAELQAEEVEQGTYTDLTKALQNPLKVRVLNLSFQKLSTLPKEIGELQNLQTLD 77

Query: 86  LSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQ 144
           L +N++T LP+ I     L  L    N LT   L +++  L+ L+  +L  NQ    P +
Sbjct: 78  LFDNKLTVLPKEILQLQNLQMLGLCCNQLTI--LSEEIGQLQKLRALDLRANQFATLPKE 135

Query: 145 ILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD 204
           IL +  L+ L L +N L  +P+E+ +L KL  L L  N LT +P   G L  L+ L L  
Sbjct: 136 ILQLQNLQTLNLDSNELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLRA 195

Query: 205 NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           NQ  +LP  I  L+ L++L L +N+L  LP E+  L    +KL+ L L  N+L TLP EI
Sbjct: 196 NQFATLPKEILQLQNLQALNLDSNELTALPKEMRQL----QKLQKLDLRENQLTTLPKEI 251

Query: 265 ITLKCLSELSLRDNPLVI 282
             LK L  L L  N L I
Sbjct: 252 GQLKSLQTLYLLANQLTI 269



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 118/227 (51%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           + +  L L  N  +  P    +  NL++L+L +N +T LP+ +     L  L  R N LT
Sbjct: 117 QKLRALDLRANQFATLPKEILQLQNLQTLNLDSNELTALPKEMRQLQKLQKLDLRENQLT 176

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  LK+L+   L  NQ    P +IL +  L+ L L +N L  +P+E+ +L KL
Sbjct: 177 --TLPKEIGQLKSLQTLYLRANQFATLPKEILQLQNLQALNLDSNELTALPKEMRQLQKL 234

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  L+ L L  NQL  LP  I  L+ L+ L L  N+  TLP
Sbjct: 235 QKLDLRENQLTTLPKEIGQLKSLQTLYLLANQLTILPEEIGKLRNLQKLYLCENRFTTLP 294

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            +I  L    + L+SL L+ N+L   P EI  L+ L  L+L  N L 
Sbjct: 295 KDIGQL----QNLQSLYLYGNQLTAFPKEIEQLQNLQILNLSYNRLT 337



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 89/260 (34%), Positives = 129/260 (49%), Gaps = 23/260 (8%)

Query: 3   YNYGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPN--------NDYNKK 54
           Y YG+  ++   + +  + + I  L+ SY+ L   TL  +I  L N        N   K 
Sbjct: 307 YLYGNQLTAFPKEIEQLQNLQI--LNLSYNRLT--TLPEEIGQLQNLQILNLSYNQLTKL 362

Query: 55  PE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLI 107
           P+      N+ TL L+   ++ FP    +  NL  L+ S  ++T LP  I     L  L 
Sbjct: 363 PKELGKLRNLKTLDLHAIQITTFPKEILQLQNLEKLNWSRTQLTTLPGEIGQMQNLKELN 422

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGN--QLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
              N LTA  LPK++  L+NL+  NL+ N  Q    P +I  +  LK L+L +N L ++P
Sbjct: 423 LEKNQLTA--LPKEIGRLQNLEELNLNSNSNQFSSLPKEIGQLSNLKNLHLDHNMLANLP 480

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
           +EI +L +L  L+L  NSL  +P+  G L+ L  L LS N L S+P  I  LK L+ L L
Sbjct: 481 KEIGQLSRLETLTLFRNSLETLPEEIGQLWNLRELDLSYNPLSSIPKEIGQLKNLRILHL 540

Query: 226 HNNKLRTLPTEIITLKCLSE 245
               L  LP EI  L+ L E
Sbjct: 541 RKTPLARLPDEIGELQDLEE 560


>gi|359683881|ref|ZP_09253882.1| lipoprotein [Leptospira santarosai str. 2000030832]
          Length = 440

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 91/227 (40%), Positives = 122/227 (53%), Gaps = 9/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           + ++ L L +N  +  P       NL+SL L +NR+  LP+ I     L  L   NN LT
Sbjct: 61  QKLEELNLRNNQFTALPQEIGTLQNLQSLSLESNRLEGLPKEIGRLQNLKRLSLVNNHLT 120

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+  +L  N+LE  P +I  +  LK LYL +N L  +P+EI +L  L
Sbjct: 121 --TLPKEIGMLQNLQNLDLIYNRLESLPKEIGQLQNLKRLYLVDNHLTTLPQEIWQLENL 178

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             LS+ GN LT +P   G L +LE L LS   L   P  I  L+ LK L L NN+L T P
Sbjct: 179 QTLSISGNQLTILPKEIGTLQKLEDLNLSG--LAVFPQEIGTLQNLKGLYLSNNRLTTFP 236

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI TL    + LK L L + +L T P EI  L+ L EL L    LV
Sbjct: 237 QEIGTL----QNLKELYLSSTQLTTFPKEIGQLQKLEELYLPSTQLV 279



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/244 (36%), Positives = 128/244 (52%), Gaps = 20/244 (8%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           +++ LD  Y+ L+S  L  +I  L         +N+  L L  N+L+  P    +  NL+
Sbjct: 131 NLQNLDLIYNRLES--LPKEIGQL---------QNLKRLYLVDNHLTTLPQEIWQLENLQ 179

Query: 83  SLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           +L +S N++T LP+ I     L  L    NL      P+++  L+NLK   LS N+L  F
Sbjct: 180 TLSISGNQLTILPKEIGTLQKLEDL----NLSGLAVFPQEIGTLQNLKGLYLSNNRLTTF 235

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P +I  +  LK LYL +  L   P+EI +L KL  L L    L  +    G L  L+ L 
Sbjct: 236 PQEIGTLQNLKELYLSSTQLTTFPKEIGQLQKLEELYLPSTQLVTLSQEIGQLQNLKLLD 295

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           LSDNQ  + P  I  L+ L+ L L +N+L TLP EI TL    ++LK L L+NN+L TL 
Sbjct: 296 LSDNQFTTFPKEIGKLRKLEYLFLEHNRLTTLPKEIGTL----QRLKLLNLYNNRLTTLS 351

Query: 262 TEII 265
            EI+
Sbjct: 352 EEIV 355



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 91/159 (57%), Gaps = 4/159 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LP+++  L+ L+  NL  NQ    P +I  +  L+ L L +N L  +P+EI +L  L  
Sbjct: 52  TLPQEIGRLQKLEELNLRNNQFTALPQEIGTLQNLQSLSLESNRLEGLPKEIGRLQNLKR 111

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           LSL  N LT +P   G L  L+ L L  N+LESLP  I  L+ LK L L +N L TLP E
Sbjct: 112 LSLVNNHLTTLPKEIGMLQNLQNLDLIYNRLESLPKEIGQLQNLKRLYLVDNHLTTLPQE 171

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
           I  L    E L++L +  N+L  LP EI TL+ L +L+L
Sbjct: 172 IWQL----ENLQTLSISGNQLTILPKEIGTLQKLEDLNL 206



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 102/190 (53%), Gaps = 3/190 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N+  L L +N L+ FP       NL+ L LS+ ++T  P+ I     L  L   +  L 
Sbjct: 220 QNLKGLYLSNNRLTTFPQEIGTLQNLKELYLSSTQLTTFPKEIGQLQKLEELYLPSTQLV 279

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +L +++  L+NLK+ +LS NQ   FP +I  +  L+YL+L +N L  +P+EI  L +L
Sbjct: 280 --TLSQEIGQLQNLKLLDLSDNQFTTFPKEIGKLRKLEYLFLEHNRLTTLPKEIGTLQRL 337

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L+L  N LT + +    L  L+ L L +N+L  LP  I  L+ LK L L  N   T P
Sbjct: 338 KLLNLYNNRLTTLSEEIVGLQNLKNLNLRNNRLTVLPQEIGQLQNLKDLDLSGNPFTTFP 397

Query: 235 TEIITLKCLS 244
            EI+ LK L 
Sbjct: 398 QEIVGLKHLQ 407



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 62/161 (38%), Positives = 85/161 (52%), Gaps = 4/161 (2%)

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           + N  ++++  L  NQL   P +I  +  L+ L L NN    +P+EI  L  L  LSL  
Sbjct: 34  LKNAMDVRILYLESNQLTTLPQEIGRLQKLEELNLRNNQFTALPQEIGTLQNLQSLSLES 93

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P   G L  L+ L L +N L +LP  I  L+ L++L L  N+L +LP EI  L 
Sbjct: 94  NRLEGLPKEIGRLQNLKRLSLVNNHLTTLPKEIGMLQNLQNLDLIYNRLESLPKEIGQL- 152

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
              + LK L L +N L TLP EI  L+ L  LS+  N L I
Sbjct: 153 ---QNLKRLYLVDNHLTTLPQEIWQLENLQTLSISGNQLTI 190



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 38/96 (39%), Positives = 51/96 (53%), Gaps = 4/96 (4%)

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           D  +   +   +  L L  NQL +LP  I  L+ L+ L L NN+   LP EI TL    +
Sbjct: 29  DFNEALKNAMDVRILYLESNQLTTLPQEIGRLQKLEELNLRNNQFTALPQEIGTL----Q 84

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L+SL L +N+L  LP EI  L+ L  LSL +N L 
Sbjct: 85  NLQSLSLESNRLEGLPKEIGRLQNLKRLSLVNNHLT 120


>gi|410450856|ref|ZP_11304886.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410015399|gb|EKO77501.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 312

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 127/228 (55%), Gaps = 7/228 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N+  L L  N ++  P    +  NL+ LDLS+NR+T LP  I N   L  L    N 
Sbjct: 47  KLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTSLPMEIGNLKNLEILTLYRNR 106

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           ++   LPK   +L+NLK+  LS N+  +FP +IL +  L++L    N L  +P  + +L 
Sbjct: 107 ISV--LPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKELPERLGQLQ 164

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L++L L GN L  +P +F +L  L++L L+ N+ +  P  + +LK L+ L L  N+L  
Sbjct: 165 NLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKELISLKNLEILELTGNQLIF 224

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           LP EI TL    +KL+ L L  N+L+ +P+ I  L+ L  L L++N L
Sbjct: 225 LPEEIGTL----DKLRVLFLEGNQLKQIPSGIEKLQNLESLYLQENQL 268



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 100/191 (52%), Gaps = 3/191 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L LY N +S  P +     NL+ L LS N+    P+ I     L  L    N L 
Sbjct: 95  KNLEILTLYRNRISVLPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRL- 153

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            + LP+ +  L+NL +  L GN+L+  P    ++ +LK L L  N     P+E+  L  L
Sbjct: 154 -KELPERLGQLQNLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKELISLKNL 212

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L GN L  +P+  G L +L  L L  NQL+ +P+ I  L+ L+SL L  N+L TLP
Sbjct: 213 EILELTGNQLIFLPEEIGTLDKLRVLFLEGNQLKQIPSGIEKLQNLESLYLQENQLTTLP 272

Query: 235 TEIITLKCLSE 245
            EI  L+ L E
Sbjct: 273 EEIGFLQNLKE 283



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 87/169 (51%), Gaps = 3/169 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N    FP+   +  NL  LD + NR+  LP+ +     L+ L    N L 
Sbjct: 118 QNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKELPERLGQLQNLNILYLLGNELK 177

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP   S L++LK  NL+ N+ + FP +++ +  L+ L L  N L  +P EI  L KL
Sbjct: 178 V--LPSSFSELQSLKSLNLNYNRFQVFPKELISLKNLEILELTGNQLIFLPEEIGTLDKL 235

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL 223
            VL L GN L  IP     L  LE+L L +NQL +LP  I  L+ LK L
Sbjct: 236 RVLFLEGNQLKQIPSGIEKLQNLESLYLQENQLTTLPEEIGFLQNLKEL 284



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 4/131 (3%)

Query: 150 TLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            ++ L L +  L      I KL  L  L+LG N +T +P   G+L  L+ L LSDN+L S
Sbjct: 27  VVRALALDSFDLKSFTEAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTS 86

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           LP  I NLK L+ L L+ N++  LP   ++L    + LK L L  NK R  P EI+ L+ 
Sbjct: 87  LPMEIGNLKNLEILTLYRNRISVLPKHFLSL----QNLKILYLSQNKFRKFPEEILQLQN 142

Query: 270 LSELSLRDNPL 280
           L  L   +N L
Sbjct: 143 LEWLDFNENRL 153



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 4/188 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           +S  + +  L+NLK  NL  NQ+   P +I ++  LK L L +N L  +P EI  L  L 
Sbjct: 39  KSFTEAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTSLPMEIGNLKNLE 98

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L+L  N ++ +P  F  L  L+ L LS N+    P  I  L+ L+ L  + N+L+ LP 
Sbjct: 99  ILTLYRNRISVLPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKELPE 158

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
            +  L+ L+     L L  N+L+ LP+    L+ L  L+L  N   +     ++ K   +
Sbjct: 159 RLGQLQNLN----ILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKELISLKNLEI 214

Query: 296 LELASRTL 303
           LEL    L
Sbjct: 215 LELTGNQL 222



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 69/133 (51%), Gaps = 4/133 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N L   P + S+  +L+SL+L+ NR    P+ + +   L  L    N L 
Sbjct: 164 QNLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKELISLKNLEILELTGNQLI 223

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP+++  L  L+V  L GNQL+Q P  I  +  L+ LYL  N L  +P EI  L  L
Sbjct: 224 F--LPEEIGTLDKLRVLFLEGNQLKQIPSGIEKLQNLESLYLQENQLTTLPEEIGFLQNL 281

Query: 175 HVLSL-GGNSLTD 186
             L L G NS ++
Sbjct: 282 KELDLQGSNSFSE 294



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 4/97 (4%)

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           D+     D   + AL L    L+S   +I  L+ LK L L  N++ +LP EI  L    +
Sbjct: 17  DLKSALEDPNVVRALALDSFDLKSFTEAIVKLRNLKELNLGRNQITSLPKEIGEL----Q 72

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            LK L L +N+L +LP EI  LK L  L+L  N + +
Sbjct: 73  NLKELDLSDNRLTSLPMEIGNLKNLEILTLYRNRISV 109


>gi|295860503|gb|ADG55428.1| CG32687 [Drosophila melanogaster]
 gi|295860511|gb|ADG55432.1| CG32687 [Drosophila melanogaster]
          Length = 178

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 78/177 (44%), Positives = 99/177 (55%), Gaps = 19/177 (10%)

Query: 10  SSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLS 69
           +SDSSD+DS +    KTLDF   SLD  TL   +   P     K   +I+T+LL HN L 
Sbjct: 5   TSDSSDTDSREQ---KTLDFGRMSLDLVTLEDHLAS-PQKALLKSSGDIETMLLNHNRLV 60

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM------- 122
             P    +F NL+ LDLS+N IT LP A+   PL TLIA+NNLLT  SLPK +       
Sbjct: 61  GLPRLLLQFGNLKILDLSSNAITTLPDAVCQLPLVTLIAKNNLLTNASLPKSLLTKMSNG 120

Query: 123 --------SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
                        LK  NLSGNQL  FP Q+ ++  LKYLYLG N ++ V ++I K+
Sbjct: 121 NGNGNATGGTNSTLKELNLSGNQLTHFPEQVTELRHLKYLYLGGNKISSVSKDIWKM 177


>gi|418745007|ref|ZP_13301349.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
 gi|418755666|ref|ZP_13311862.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409963871|gb|EKO31771.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|410794010|gb|EKR91923.1| leucine rich repeat protein [Leptospira santarosai str. CBC379]
          Length = 304

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 83/229 (36%), Positives = 127/229 (55%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N+  L L  N ++  P    +  NL+ LDLS+NR+T LP  I N   L  L    N 
Sbjct: 39  KLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTSLPMEIGNLKNLEILTLYRNR 98

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           ++   LPK   +L+NLK+  LS N+  +FP +IL +  L++L    N L  +P  + +L 
Sbjct: 99  ISV--LPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKELPERLGQLQ 156

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L++L L GN L  +P +F +L  L++L L+ N+ +  P  + +LK L+ L L  N+L  
Sbjct: 157 NLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKELISLKNLEILELTGNQLIF 216

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP EI TL    +KL+ L L  N+L+ +P+ I  L+ L  L L++N L 
Sbjct: 217 LPEEIGTL----DKLRVLFLEGNQLKQIPSGIEKLQNLESLYLQENQLT 261



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 100/191 (52%), Gaps = 3/191 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L LY N +S  P +     NL+ L LS N+    P+ I     L  L    N L 
Sbjct: 87  KNLEILTLYRNRISVLPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRL- 145

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            + LP+ +  L+NL +  L GN+L+  P    ++ +LK L L  N     P+E+  L  L
Sbjct: 146 -KELPERLGQLQNLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKELISLKNL 204

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L GN L  +P+  G L +L  L L  NQL+ +P+ I  L+ L+SL L  N+L TLP
Sbjct: 205 EILELTGNQLIFLPEEIGTLDKLRVLFLEGNQLKQIPSGIEKLQNLESLYLQENQLTTLP 264

Query: 235 TEIITLKCLSE 245
            EI  L+ L E
Sbjct: 265 EEIGFLQNLKE 275



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 87/169 (51%), Gaps = 3/169 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N    FP+   +  NL  LD + NR+  LP+ +     L+ L    N L 
Sbjct: 110 QNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKELPERLGQLQNLNILYLLGNELK 169

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP   S L++LK  NL+ N+ + FP +++ +  L+ L L  N L  +P EI  L KL
Sbjct: 170 V--LPSSFSELQSLKSLNLNYNRFQVFPKELISLKNLEILELTGNQLIFLPEEIGTLDKL 227

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL 223
            VL L GN L  IP     L  LE+L L +NQL +LP  I  L+ LK L
Sbjct: 228 RVLFLEGNQLKQIPSGIEKLQNLESLYLQENQLTTLPEEIGFLQNLKEL 276



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 71/134 (52%), Gaps = 4/134 (2%)

Query: 147 DIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQ 206
           D   ++ L L +  L      I KL  L  L+LG N +T +P   G+L  L+ L LSDN+
Sbjct: 16  DPNVVRALALDSFDLKSFTEAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNR 75

Query: 207 LESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIIT 266
           L SLP  I NLK L+ L L+ N++  LP   ++L    + LK L L  NK R  P EI+ 
Sbjct: 76  LTSLPMEIGNLKNLEILTLYRNRISVLPKHFLSL----QNLKILYLSQNKFRKFPEEILQ 131

Query: 267 LKCLSELSLRDNPL 280
           L+ L  L   +N L
Sbjct: 132 LQNLEWLDFNENRL 145



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 4/188 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           +S  + +  L+NLK  NL  NQ+   P +I ++  LK L L +N L  +P EI  L  L 
Sbjct: 31  KSFTEAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTSLPMEIGNLKNLE 90

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L+L  N ++ +P  F  L  L+ L LS N+    P  I  L+ L+ L  + N+L+ LP 
Sbjct: 91  ILTLYRNRISVLPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKELPE 150

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
            +  L+ L+     L L  N+L+ LP+    L+ L  L+L  N   +     ++ K   +
Sbjct: 151 RLGQLQNLN----ILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKELISLKNLEI 206

Query: 296 LELASRTL 303
           LEL    L
Sbjct: 207 LELTGNQL 214



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 69/133 (51%), Gaps = 4/133 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N L   P + S+  +L+SL+L+ NR    P+ + +   L  L    N L 
Sbjct: 156 QNLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKELISLKNLEILELTGNQLI 215

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP+++  L  L+V  L GNQL+Q P  I  +  L+ LYL  N L  +P EI  L  L
Sbjct: 216 F--LPEEIGTLDKLRVLFLEGNQLKQIPSGIEKLQNLESLYLQENQLTTLPEEIGFLQNL 273

Query: 175 HVLSL-GGNSLTD 186
             L L G NS ++
Sbjct: 274 KELDLQGSNSFSE 286



 Score = 40.4 bits (93), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 4/97 (4%)

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           D+     D   + AL L    L+S   +I  L+ LK L L  N++ +LP EI  L    +
Sbjct: 9   DLKSALEDPNVVRALALDSFDLKSFTEAIVKLRNLKELNLGRNQITSLPKEIGEL----Q 64

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            LK L L +N+L +LP EI  LK L  L+L  N + +
Sbjct: 65  NLKELDLSDNRLTSLPMEIGNLKNLEILTLYRNRISV 101


>gi|255070543|ref|XP_002507353.1| u-box domain/leucine-rich repeat protein [Micromonas sp. RCC299]
 gi|226522628|gb|ACO68611.1| u-box domain/leucine-rich repeat protein [Micromonas sp. RCC299]
          Length = 426

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 85/221 (38%), Positives = 109/221 (49%), Gaps = 12/221 (5%)

Query: 69  SFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKN 127
              P    + + LR L LS NR+T +P  I     L  L   +N LT  S+P ++  L +
Sbjct: 203 GAVPAELGRLSALRKLSLSRNRLTSVPAEIGQLTSLVKLYLHDNRLT--SVPAEIGQLTS 260

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           L+   L  NQL   P +I  +  L+ L L  N L  VP EI +L  L  L L  N LT +
Sbjct: 261 LEGLWLRHNQLTSLPAEIGQLTALRVLLLYGNQLTSVPAEIGQLTSLTELHLADNQLTSV 320

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
           P   G L  LE L L DNQL S+PA I  L  L+ L L  N+L ++P EI  L     +L
Sbjct: 321 PAEIGQLTSLERLGLRDNQLTSVPAEIGQLTSLERLYLGGNRLTSVPAEIGQLT----EL 376

Query: 248 KSLLLHNNKLRTLPTEIITLKCLSELSLRDN-----PLVIR 283
           K L L  N+L ++P EI  L  L  L L  N     P VIR
Sbjct: 377 KELNLEGNQLTSVPAEIGQLTSLERLYLGHNQLTSVPAVIR 417



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 80/205 (39%), Positives = 107/205 (52%), Gaps = 7/205 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L  N L+  P    + T+L  L L +NR+T +P  I     L  L  R+N LT  SLP
Sbjct: 218 LSLSRNRLTSVPAEIGQLTSLVKLYLHDNRLTSVPAEIGQLTSLEGLWLRHNQLT--SLP 275

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            ++  L  L+V  L GNQL   P +I  + +L  L+L +N L  VP EI +L  L  L L
Sbjct: 276 AEIGQLTALRVLLLYGNQLTSVPAEIGQLTSLTELHLADNQLTSVPAEIGQLTSLERLGL 335

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N LT +P   G L  LE L L  N+L S+PA I  L  LK L L  N+L ++P EI  
Sbjct: 336 RDNQLTSVPAEIGQLTSLERLYLGGNRLTSVPAEIGQLTELKELNLEGNQLTSVPAEIGQ 395

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEI 264
           L      L+ L L +N+L ++P  I
Sbjct: 396 LTS----LERLYLGHNQLTSVPAVI 416



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 44/132 (33%), Positives = 63/132 (47%), Gaps = 22/132 (16%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA---- 115
           LLLY N L+  P    + T+L  L L++N++T +P  I     L  L  R+N LT+    
Sbjct: 287 LLLYGNQLTSVPAEIGQLTSLTELHLADNQLTSVPAEIGQLTSLERLGLRDNQLTSVPAE 346

Query: 116 -----------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
                             S+P ++  L  LK  NL GNQL   P +I  + +L+ LYLG+
Sbjct: 347 IGQLTSLERLYLGGNRLTSVPAEIGQLTELKELNLEGNQLTSVPAEIGQLTSLERLYLGH 406

Query: 159 NSLNHVPREINK 170
           N L  VP  I +
Sbjct: 407 NQLTSVPAVIRE 418


>gi|417765366|ref|ZP_12413328.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352303|gb|EJP04499.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 385

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 91/231 (39%), Positives = 128/231 (55%), Gaps = 9/231 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP---LSTLIARN 110
           K +N+  L L+ N L+  P    +  NL+ L LS NR+T LP+ I         +L  +N
Sbjct: 142 KLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKN 201

Query: 111 NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
              T   LPK+++ L+NL+  +L  N+L   P +I  +  L+ L L  N L  +P+EI +
Sbjct: 202 KPFTI--LPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQ 259

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L VL L GN LT +P     L  L+ L L  N+L +LP  I  L+ L+ L L  N+L
Sbjct: 260 LKNLLVLDLSGNQLTILPKEITQLQNLQVLDLYQNRLTTLPKEIGQLQNLQKLHLSRNQL 319

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            TLP EI  L    +KL+SL L +N+L TLP EI  LK L +L L +NPL+
Sbjct: 320 TTLPKEIGRL----QKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPLL 366



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 98/271 (36%), Positives = 135/271 (49%), Gaps = 13/271 (4%)

Query: 19  FKTVSIKTLDF--SYSSLDSETLATQIELLPNN--DYNKKPENIDTLLLYHNNLSFFPDN 74
           F+ V I  L F  S +   +E   T  E L  N  +  K P  +  L L  + L   P  
Sbjct: 11  FQKVEILFLIFVCSLTQFHAEENHTTKEGLYTNLTEALKNPNEVRILDLSRSKLKILPKE 70

Query: 75  ASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNL 133
             +  NL+ L+  NN++T LP+ I     L  L  +NN LT  +LP+++  L+NLKV +L
Sbjct: 71  IGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLT--TLPEEIGQLQNLKVLHL 128

Query: 134 SGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGD 193
           + NQL   P +I  +  L+ L L  N LN +P+EI +L  L  L L  N LT +P+  G 
Sbjct: 129 NNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQ 188

Query: 194 LYQLEALILS--DNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLL 251
           L  L  L L   +     LP  I+ L+ L+ L L  N+L  LP EI  L    + L+ L 
Sbjct: 189 LESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQL----QNLRILD 244

Query: 252 LHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           L+ N+L  LP EI  LK L  L L  N L I
Sbjct: 245 LYQNRLTILPKEIGQLKNLLVLDLSGNQLTI 275


>gi|255088489|ref|XP_002506167.1| predicted protein [Micromonas sp. RCC299]
 gi|226521438|gb|ACO67425.1| predicted protein [Micromonas sp. RCC299]
          Length = 394

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 91/238 (38%), Positives = 115/238 (48%), Gaps = 22/238 (9%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L  N L+  P    + T L  L L +N +T LP  I     L  L    N LT  S+P +
Sbjct: 37  LEGNELTSVPAEIGQLTALVELKLEDNMLTELPAEIGQLKSLVELKLEGNELT--SMPAE 94

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L +L V NL+ NQL + P +I  + +L+ L L NN L  +P EI +L  L  L L G
Sbjct: 95  IGQLASLVVSNLNYNQLTELPAEIGQLKSLRELNLSNNHLTILPAEIGQLTSLVELKLEG 154

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N LT +P   G L  L  L L DN L  LPA I  LK L  L L  N+L ++P EI  L 
Sbjct: 155 NELTSVPAEIGQLASLVELKLEDNMLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLT 214

Query: 242 CLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            L                    + L+ L L NN+L +LP EI  LK L EL L DN L
Sbjct: 215 SLVVSNLNYNQLTELPAEIGQLKSLRELNLSNNQLTSLPAEIGQLKSLVELKLEDNML 272



 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 91/244 (37%), Positives = 121/244 (49%), Gaps = 17/244 (6%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L  N+    P  I  L       L  N L+  P    +  +L  L L  N +T +P  I 
Sbjct: 152 LEGNELTSVPAEIGQLASLVELKLEDNMLTELPAEIGQLKSLVELKLEGNELTSMPAEIG 211

Query: 100 NFPLSTLIARN---NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL 156
              L++L+  N   N LT   LP ++  LK+L+  NLS NQL   P +I  + +L  L L
Sbjct: 212 Q--LTSLVVSNLNYNQLT--ELPAEIGQLKSLRELNLSNNQLTSLPAEIGQLKSLVELKL 267

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
            +N L  +P EI +L  L  L+L  N LT +P   G L  L  L L DN L  LPA I  
Sbjct: 268 EDNMLTELPAEIGQLKSLVELNLYNNRLTSVPAEIGQLTSLVELKLEDNMLTELPAEIGQ 327

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           LK L+ L L NN+L ++P EI  L  L+E    L L  N+L ++P EI  L  L+EL L 
Sbjct: 328 LKSLRELKLWNNRLTSVPAEIGQLTSLTE----LDLRCNELTSVPAEIGQLTSLTELVLH 383

Query: 277 DNPL 280
            N L
Sbjct: 384 KNQL 387



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/226 (36%), Positives = 113/226 (50%), Gaps = 12/226 (5%)

Query: 22  VSIKTLDFSYSSLDSET--LATQIEL-LPNNDYNKKPENIDTLL------LYHNNLSFFP 72
           V +K  D   + L +E   L + +EL L  N+    P  I  L       L +N L+  P
Sbjct: 171 VELKLEDNMLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLTSLVVSNLNYNQLTELP 230

Query: 73  DNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVF 131
               +  +LR L+LSNN++T LP  I     L  L   +N+LT   LP ++  LK+L   
Sbjct: 231 AEIGQLKSLRELNLSNNQLTSLPAEIGQLKSLVELKLEDNMLT--ELPAEIGQLKSLVEL 288

Query: 132 NLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTF 191
           NL  N+L   P +I  + +L  L L +N L  +P EI +L  L  L L  N LT +P   
Sbjct: 289 NLYNNRLTSVPAEIGQLTSLVELKLEDNMLTELPAEIGQLKSLRELKLWNNRLTSVPAEI 348

Query: 192 GDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
           G L  L  L L  N+L S+PA I  L  L  L+LH N+L +LP EI
Sbjct: 349 GQLTSLTELDLRCNELTSVPAEIGQLTSLTELVLHKNQLTSLPAEI 394



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 70/167 (41%), Positives = 89/167 (53%), Gaps = 10/167 (5%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           SLP ++  L +L+   L GN+L   P +I  +  L  L L +N L  +P EI +L  L  
Sbjct: 21  SLPAEIGQLTSLRELGLEGNELTSVPAEIGQLTALVELKLEDNMLTELPAEIGQLKSLVE 80

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSD---NQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L L GN LT +P   G   QL +L++S+   NQL  LPA I  LK L+ L L NN L  L
Sbjct: 81  LKLEGNELTSMPAEIG---QLASLVVSNLNYNQLTELPAEIGQLKSLRELNLSNNHLTIL 137

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P EI  L  L E    L L  N+L ++P EI  L  L EL L DN L
Sbjct: 138 PAEIGQLTSLVE----LKLEGNELTSVPAEIGQLASLVELKLEDNML 180



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 70/180 (38%), Positives = 88/180 (48%), Gaps = 12/180 (6%)

Query: 121 DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
           ++  L  L+  NL  NQL   P +I  + +L+ L L  N L  VP EI +L  L  L L 
Sbjct: 2   EVGRLGALRTMNLGVNQLTSLPAEIGQLTSLRELGLEGNELTSVPAEIGQLTALVELKLE 61

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
            N LT++P   G L  L  L L  N+L S+PA I  L  L    L+ N+L  LP EI  L
Sbjct: 62  DNMLTELPAEIGQLKSLVELKLEGNELTSMPAEIGQLASLVVSNLNYNQLTELPAEIGQL 121

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELAS 300
           K L E    L L NN L  LP EI  L  L EL L  N        ++T  P  + +LAS
Sbjct: 122 KSLRE----LNLSNNHLTILPAEIGQLTSLVELKLEGN--------ELTSVPAEIGQLAS 169



 Score = 40.0 bits (92), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 4/69 (5%)

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
           A +  L  L+++ L  N+L +LP EI  L  L E    L L  N+L ++P EI  L  L 
Sbjct: 1   AEVGRLGALRTMNLGVNQLTSLPAEIGQLTSLRE----LGLEGNELTSVPAEIGQLTALV 56

Query: 272 ELSLRDNPL 280
           EL L DN L
Sbjct: 57  ELKLEDNML 65


>gi|429961274|gb|ELA40819.1| hypothetical protein VICG_02144, partial [Vittaforma corneae ATCC
           50505]
          Length = 248

 Score =  117 bits (294), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 79/212 (37%), Positives = 112/212 (52%), Gaps = 7/212 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P N+  + +    + F   +  +   L  LDLS N +  LP  I     L  L    N L
Sbjct: 43  PVNVTEISICRQGIRFIGSDVGRLVKLEKLDLSFNNLETLPPEIGKLKNLQHLDLYGNRL 102

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
              +LP ++  LKNL+  +L  NQ E FP  I  +  L+ L L +N    +P EI +L K
Sbjct: 103 W--TLPSEVEELKNLQYLDLGNNQFESFPTVIRKLKNLERLILNDNKFGLLPIEIAELKK 160

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L GN L  +PD  G + +L  LIL+DN+LES P  I+ L+ L++L L  NKL+ L
Sbjct: 161 LQCLELRGNKLKLLPDEIGGMKELRELILNDNELESFPTVIAELRKLQTLNLRGNKLKLL 220

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
           P EI TLK    +L++L L  N+  + PT I+
Sbjct: 221 PDEIETLK----ELQTLYLEYNEFESFPTVIV 248



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 63/160 (39%), Positives = 88/160 (55%), Gaps = 4/160 (2%)

Query: 121 DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
           D+  L  L+  +LS N LE  P +I  +  L++L L  N L  +P E+ +L  L  L LG
Sbjct: 62  DVGRLVKLEKLDLSFNNLETLPPEIGKLKNLQHLDLYGNRLWTLPSEVEELKNLQYLDLG 121

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
            N     P     L  LE LIL+DN+   LP  I+ LK L+ L L  NKL+ LP EI  +
Sbjct: 122 NNQFESFPTVIRKLKNLERLILNDNKFGLLPIEIAELKKLQCLELRGNKLKLLPDEIGGM 181

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           K    +L+ L+L++N+L + PT I  L+ L  L+LR N L
Sbjct: 182 K----ELRELILNDNELESFPTVIAELRKLQTLNLRGNKL 217



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 48/119 (40%), Positives = 61/119 (51%), Gaps = 4/119 (3%)

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           I    G L +LE L LS N LE+LP  I  LK L+ L L+ N+L TLP+E+  LK     
Sbjct: 59  IGSDVGRLVKLEKLDLSFNNLETLPPEIGKLKNLQHLDLYGNRLWTLPSEVEELK----N 114

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKV 305
           L+ L L NN+  + PT I  LK L  L L DN   +  +     K    LEL    LK+
Sbjct: 115 LQYLDLGNNQFESFPTVIRKLKNLERLILNDNKFGLLPIEIAELKKLQCLELRGNKLKL 173


>gi|456875117|gb|EMF90348.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 304

 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 83/229 (36%), Positives = 127/229 (55%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N+  L L  N ++  P    +  NL+ LDLS+NR+T LP  I N   L  L    N 
Sbjct: 39  KLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTSLPMEIGNLKNLEILTLYRNR 98

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           ++   LPK   +L+NLK+  LS N+  +FP +IL +  L++L    N L  +P  + +L 
Sbjct: 99  ISV--LPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKELPERLGQLQ 156

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L++L L GN L  +P +F +L  L++L L+ N+ +  P  + +LK L+ L L  N+L  
Sbjct: 157 NLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKELISLKNLEILELTGNQLIF 216

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP EI TL    +KL+ L L  N+L+ +P+ I  L+ L  L L++N L 
Sbjct: 217 LPEEIGTL----DKLRVLFLEGNQLKRIPSGIEKLQNLESLYLQENQLT 261



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 100/191 (52%), Gaps = 3/191 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L LY N +S  P +     NL+ L LS N+    P+ I     L  L    N L 
Sbjct: 87  KNLEILTLYRNRISVLPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRL- 145

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            + LP+ +  L+NL +  L GN+L+  P    ++ +LK L L  N     P+E+  L  L
Sbjct: 146 -KELPERLGQLQNLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKELISLKNL 204

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L GN L  +P+  G L +L  L L  NQL+ +P+ I  L+ L+SL L  N+L TLP
Sbjct: 205 EILELTGNQLIFLPEEIGTLDKLRVLFLEGNQLKRIPSGIEKLQNLESLYLQENQLTTLP 264

Query: 235 TEIITLKCLSE 245
            EI  L+ L E
Sbjct: 265 EEIGFLQNLKE 275



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 63/169 (37%), Positives = 87/169 (51%), Gaps = 3/169 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N    FP+   +  NL  LD + NR+  LP+ +     L+ L    N L 
Sbjct: 110 QNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKELPERLGQLQNLNILYLLGNELK 169

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP   S L++LK  NL+ N+ + FP +++ +  L+ L L  N L  +P EI  L KL
Sbjct: 170 V--LPSSFSELQSLKSLNLNYNRFQVFPKELISLKNLEILELTGNQLIFLPEEIGTLDKL 227

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL 223
            VL L GN L  IP     L  LE+L L +NQL +LP  I  L+ LK L
Sbjct: 228 RVLFLEGNQLKRIPSGIEKLQNLESLYLQENQLTTLPEEIGFLQNLKEL 276



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 4/188 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           +S  + +  L+NLK  NL  NQ+   P +I ++  LK L L +N L  +P EI  L  L 
Sbjct: 31  KSFTEAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTSLPMEIGNLKNLE 90

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L+L  N ++ +P  F  L  L+ L LS N+    P  I  L+ L+ L  + N+L+ LP 
Sbjct: 91  ILTLYRNRISVLPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKELPE 150

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
            +  L+ L+     L L  N+L+ LP+    L+ L  L+L  N   +     ++ K   +
Sbjct: 151 RLGQLQNLN----ILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKELISLKNLEI 206

Query: 296 LELASRTL 303
           LEL    L
Sbjct: 207 LELTGNQL 214



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/133 (34%), Positives = 69/133 (51%), Gaps = 4/133 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N L   P + S+  +L+SL+L+ NR    P+ + +   L  L    N L 
Sbjct: 156 QNLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKELISLKNLEILELTGNQLI 215

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP+++  L  L+V  L GNQL++ P  I  +  L+ LYL  N L  +P EI  L  L
Sbjct: 216 F--LPEEIGTLDKLRVLFLEGNQLKRIPSGIEKLQNLESLYLQENQLTTLPEEIGFLQNL 273

Query: 175 HVLSL-GGNSLTD 186
             L L G NS ++
Sbjct: 274 KELDLQGSNSFSE 286



 Score = 40.0 bits (92), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 4/97 (4%)

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           D+     D   + AL L    L+S   +I  L+ LK L L  N++ +LP EI  L    +
Sbjct: 9   DLKSALEDPNIVRALALDSFDLKSFTEAIVKLRNLKELNLGRNQITSLPKEIGEL----Q 64

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            LK L L +N+L +LP EI  LK L  L+L  N + +
Sbjct: 65  NLKELDLSDNRLTSLPMEIGNLKNLEILTLYRNRISV 101


>gi|124007858|ref|ZP_01692559.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123986620|gb|EAY26410.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 375

 Score =  117 bits (293), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 90/262 (34%), Positives = 138/262 (52%), Gaps = 38/262 (14%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L HN L+  P++ ++  +L++LDL+ N+   +P +IT    L  L+   N L  ESLP
Sbjct: 98  LYLGHNKLANLPNDLAQLAHLKTLDLNVNQFRQIPLSITQLTRLEQLLMNYNSL--ESLP 155

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN-------------------- 159
           ++   L NLKV  L  NQL+ FP+ I ++P L+ L+LG N                    
Sbjct: 156 ENFKKLTNLKVLQLYQNQLKDFPLVITELPHLEVLWLGANVFSTLPAEISLLQQLKDLSL 215

Query: 160 ---SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
               + ++P+++ +L  L  LS+  N L  +P   G L++L AL +  N ++ +P SI N
Sbjct: 216 YNVPIQNIPQQVGRLSNLRELSMKYNQLHILPSEIGSLWRLIALEVDHNHIDKVPESIEN 275

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           L+ L+ L L NN+L+++   I  L    + LKSL L NN+L  LP EI  LK L  LS+ 
Sbjct: 276 LRKLEYLSLRNNQLKSITGGIGQL----QNLKSLHLDNNQLTELPEEIGKLKNLEVLSVE 331

Query: 277 DNPLVIRFVSDMTYKPPSLLEL 298
           +N L           PP+L +L
Sbjct: 332 NNQL--------KAVPPALYQL 345



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 61/184 (33%), Positives = 95/184 (51%), Gaps = 6/184 (3%)

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
           + L+N    N S   +EQ    +  +  L++LYLG+N L ++P ++ +L  L  L L  N
Sbjct: 67  AALRNNTALNFSELHMEQLLPGVGKLTELQHLYLGHNKLANLPNDLAQLAHLKTLDLNVN 126

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
               IP +   L +LE L+++ N LESLP +   L  LK L L+ N+L+  P  I  L  
Sbjct: 127 QFRQIPLSITQLTRLEQLLMNYNSLESLPENFKKLTNLKVLQLYQNQLKDFPLVITELP- 185

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRT 302
               L+ L L  N   TLP EI  L+ L +LSL + P  I+ +     +  +L EL+ + 
Sbjct: 186 ---HLEVLWLGANVFSTLPAEISLLQQLKDLSLYNVP--IQNIPQQVGRLSNLRELSMKY 240

Query: 303 LKVH 306
            ++H
Sbjct: 241 NQLH 244



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 58/170 (34%), Positives = 83/170 (48%), Gaps = 4/170 (2%)

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L  E L   +  L  L+   L  N+L   P  +  +  LK L L  N    +P  I +L 
Sbjct: 80  LHMEQLLPGVGKLTELQHLYLGHNKLANLPNDLAQLAHLKTLDLNVNQFRQIPLSITQLT 139

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           +L  L +  NSL  +P+ F  L  L+ L L  NQL+  P  I+ L  L+ L L  N   T
Sbjct: 140 RLEQLLMNYNSLESLPENFKKLTNLKVLQLYQNQLKDFPLVITELPHLEVLWLGANVFST 199

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           LP EI     L ++LK L L+N  ++ +P ++  L  L ELS++ N L I
Sbjct: 200 LPAEI----SLLQQLKDLSLYNVPIQNIPQQVGRLSNLRELSMKYNQLHI 245


>gi|421090489|ref|ZP_15551281.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000703|gb|EKO51331.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 448

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 123/228 (53%), Gaps = 7/228 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L  N L+  PD   +  NL+ L+L  N++T LP+ I     L  L    N 
Sbjct: 115 KLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNK 174

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT   LP+ +  L+NL++ N  GNQL  FP +I  +  L+ L LG N L  +  E+ +L 
Sbjct: 175 LTI--LPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQ 232

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L +L L  N LT +P   G L +L+ L L   QL++LP  I  L+ L+ L L+   L  
Sbjct: 233 NLQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTI 292

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           LP EI  L     KL+ L L+ N+L TLP EI  LK L EL L +NPL
Sbjct: 293 LPKEIGQLS----KLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPL 336



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/246 (34%), Positives = 126/246 (51%), Gaps = 22/246 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L    N L+ FP    +   L+ L+L  NR+T L + +     L  L   +N LT
Sbjct: 186 QNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLT 245

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+ L+  NL G QL+  P  I+ +  L+ L L    L  +P+EI +L KL
Sbjct: 246 --TLPKEIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKL 303

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L GN LT +P+  G L +L+ L L +N L +LP  I  L+ L++L L  N++ T P
Sbjct: 304 QKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFP 363

Query: 235 TEIITLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            EI  L+ L E                    L+ L L  N+L TLP E+  L+ L +L+L
Sbjct: 364 KEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNL 423

Query: 276 RDNPLV 281
            +NP+ 
Sbjct: 424 YNNPIA 429



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/222 (36%), Positives = 117/222 (52%), Gaps = 7/222 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P++   L L  + L+       K  NL+ L L+ N++T LP  I     L  L   +N L
Sbjct: 47  PKDARILNLSGSKLATLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNEL 106

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++  L+NL+V NL  N+L   P ++  +  L+ L L  N L  +P +I +L  
Sbjct: 107 TI--LPKEIGKLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQN 164

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L VL+L  N LT +P+  G L  L+ L    NQL + P  I  L+ L+ L L  N+L TL
Sbjct: 165 LQVLNLDLNKLTILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTL 224

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
             E++ L    + L+ L L +N L TLP EI  L+ L EL+L
Sbjct: 225 REEVVQL----QNLQILDLISNPLTTLPKEIGQLQKLQELNL 262



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 91/164 (55%), Gaps = 4/164 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +L K++  L+NL+   L+ NQL   P +I  +  L+ L L +N L  +P+EI KL  L V
Sbjct: 62  TLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQV 121

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+LG N LT +PD  G L  L+ L L  N+L  LP  I  L+ L+ L L  NKL  LP +
Sbjct: 122 LNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLDLNKLTILPEK 181

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L    + L+ L    N+L T P EI  L+ L EL+L  N L
Sbjct: 182 IGQL----QNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRL 221


>gi|421113331|ref|ZP_15573775.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|422005173|ref|ZP_16352370.1| hypothetical protein LSS_16811 [Leptospira santarosai serovar
           Shermani str. LT 821]
 gi|410801105|gb|EKS07279.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|417256187|gb|EKT85625.1| hypothetical protein LSS_16811 [Leptospira santarosai serovar
           Shermani str. LT 821]
          Length = 312

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/229 (36%), Positives = 127/229 (55%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N+  L L  N ++  P    +  NL+ LDLS+NR+T LP  I N   L  L    N 
Sbjct: 47  KLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTSLPVEIGNLKNLEILTLYRNR 106

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           ++   LPK   +L+NLK+  LS N+  +FP +IL +  L++L    N L  +P  + +L 
Sbjct: 107 ISV--LPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKELPERLGQLQ 164

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L++L L GN L  +P +F +L  L++L L+ N+ +  P  + +LK L+ L L  N+L  
Sbjct: 165 NLNILYLLGNELKALPSSFSELQSLKSLNLNYNRFQVFPKELISLKNLEILELTGNQLIF 224

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP EI TL    +KL+ L L  N+L+ +P+ I  L+ L  L L++N L 
Sbjct: 225 LPEEIGTL----DKLRVLFLEGNQLKQIPSGIEKLQNLESLYLQENQLT 269



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 100/191 (52%), Gaps = 3/191 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L LY N +S  P +     NL+ L LS N+    P+ I     L  L    N L 
Sbjct: 95  KNLEILTLYRNRISVLPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRL- 153

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            + LP+ +  L+NL +  L GN+L+  P    ++ +LK L L  N     P+E+  L  L
Sbjct: 154 -KELPERLGQLQNLNILYLLGNELKALPSSFSELQSLKSLNLNYNRFQVFPKELISLKNL 212

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L GN L  +P+  G L +L  L L  NQL+ +P+ I  L+ L+SL L  N+L TLP
Sbjct: 213 EILELTGNQLIFLPEEIGTLDKLRVLFLEGNQLKQIPSGIEKLQNLESLYLQENQLTTLP 272

Query: 235 TEIITLKCLSE 245
            EI  L+ L E
Sbjct: 273 EEIGFLQNLKE 283



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/169 (37%), Positives = 88/169 (52%), Gaps = 3/169 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N    FP+   +  NL  LD + NR+  LP+ +     L+ L    N L 
Sbjct: 118 QNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKELPERLGQLQNLNILYLLGNELK 177

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  LP   S L++LK  NL+ N+ + FP +++ +  L+ L L  N L  +P EI  L KL
Sbjct: 178 A--LPSSFSELQSLKSLNLNYNRFQVFPKELISLKNLEILELTGNQLIFLPEEIGTLDKL 235

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL 223
            VL L GN L  IP     L  LE+L L +NQL +LP  I  L+ LK L
Sbjct: 236 RVLFLEGNQLKQIPSGIEKLQNLESLYLQENQLTTLPEEIGFLQNLKEL 284



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 4/131 (3%)

Query: 150 TLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            ++ L L +  L      I KL  L  L+LG N +T +P   G+L  L+ L LSDN+L S
Sbjct: 27  VVRALALDSFDLKSFTEAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTS 86

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           LP  I NLK L+ L L+ N++  LP   ++L    + LK L L  NK R  P EI+ L+ 
Sbjct: 87  LPVEIGNLKNLEILTLYRNRISVLPKHFLSL----QNLKILYLSQNKFRKFPEEILQLQN 142

Query: 270 LSELSLRDNPL 280
           L  L   +N L
Sbjct: 143 LEWLDFNENRL 153



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 4/188 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           +S  + +  L+NLK  NL  NQ+   P +I ++  LK L L +N L  +P EI  L  L 
Sbjct: 39  KSFTEAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTSLPVEIGNLKNLE 98

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L+L  N ++ +P  F  L  L+ L LS N+    P  I  L+ L+ L  + N+L+ LP 
Sbjct: 99  ILTLYRNRISVLPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKELPE 158

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
            +  L+ L+     L L  N+L+ LP+    L+ L  L+L  N   +     ++ K   +
Sbjct: 159 RLGQLQNLN----ILYLLGNELKALPSSFSELQSLKSLNLNYNRFQVFPKELISLKNLEI 214

Query: 296 LELASRTL 303
           LEL    L
Sbjct: 215 LELTGNQL 222



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 69/133 (51%), Gaps = 4/133 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N L   P + S+  +L+SL+L+ NR    P+ + +   L  L    N L 
Sbjct: 164 QNLNILYLLGNELKALPSSFSELQSLKSLNLNYNRFQVFPKELISLKNLEILELTGNQLI 223

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP+++  L  L+V  L GNQL+Q P  I  +  L+ LYL  N L  +P EI  L  L
Sbjct: 224 F--LPEEIGTLDKLRVLFLEGNQLKQIPSGIEKLQNLESLYLQENQLTTLPEEIGFLQNL 281

Query: 175 HVLSL-GGNSLTD 186
             L L G NS ++
Sbjct: 282 KELDLQGSNSFSE 294



 Score = 40.8 bits (94), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 4/97 (4%)

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           D+     D   + AL L    L+S   +I  L+ LK L L  N++ +LP EI  L    +
Sbjct: 17  DLKSALEDPNVVRALALDSFDLKSFTEAIVKLRNLKELNLGRNQITSLPKEIGEL----Q 72

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            LK L L +N+L +LP EI  LK L  L+L  N + +
Sbjct: 73  NLKELDLSDNRLTSLPVEIGNLKNLEILTLYRNRISV 109


>gi|418717491|ref|ZP_13277153.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410787088|gb|EKR80823.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 426

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/226 (41%), Positives = 131/226 (57%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+++L L HN L+  P    +  NL SL L +N++  LP+ I     L  L  RNN LT
Sbjct: 187 QNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLT 246

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+   L+ N+L   P +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 247 --TLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNL 304

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L GN LT +P+  G L +L+ L L +NQL  LP  I  L+ L+SL L +N+L  LP
Sbjct: 305 QELDLDGNQLTTLPENIGQLQRLQTLYLGNNQLNFLPKEIGQLQNLESLDLEHNQLNALP 364

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L    +KL++L L  N+L TLP EI  LK L +L L +NPL
Sbjct: 365 KEIGKL----QKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPL 406



 Score =  111 bits (277), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 115/231 (49%), Gaps = 22/231 (9%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLK 129
            P    K  NL+ L LS N++  LP+ I     L  L    N LTA  +PK++  L+NL+
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTA--IPKEIGQLQNLQ 144

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
             NL+ NQL   P  I  +  L+ LYLG+N  N + +EI +L  L  L L  N L  +P 
Sbjct: 145 ELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPK 204

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS----- 244
             G L  LE+L L  NQL  LP  I  L+ L+ L L NN+L TLP EI  L+ L      
Sbjct: 205 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 245 --------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                         + L+ L L+ N+L TLP EI  L+ L EL L  N L 
Sbjct: 265 KNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLT 315



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/219 (36%), Positives = 109/219 (49%), Gaps = 35/219 (15%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-------------- 102
           N+++L L HN L+  P    +  NL+ L L NN++T LP+ I                  
Sbjct: 211 NLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTT 270

Query: 103 ----------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                     L  L    N LT  +LPK++  L+NL+  +L GNQL   P  I  +  L+
Sbjct: 271 LPEEIGQLQNLQKLKLYENQLT--TLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQ 328

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYLGNN LN +P+EI +L  L  L L  N L  +P   G L +L+ L L  NQL +LP 
Sbjct: 329 TLYLGNNQLNFLPKEIGQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPE 388

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLL 251
            I  LK LK L LHNN    LP+E I      E+++ LL
Sbjct: 389 EIKQLKNLKKLYLHNN---PLPSEKI------ERIRKLL 418



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 91/182 (50%), Gaps = 27/182 (14%)

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQI----------------LDIP-------TLKYLYLGN 158
           + N +N+++ NLSG++L   P +I                + +P        L+ L+L  
Sbjct: 45  LKNPQNIRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSK 104

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P EI +L  L  L L  N LT IP   G L  L+ L L+ NQL +LP  I  L+
Sbjct: 105 NQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQ 164

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L++L L +N+  ++  EI  L    + L+SL L +N+L  LP EI  L+ L  L L  N
Sbjct: 165 RLQTLYLGHNQFNSILKEIGQL----QNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHN 220

Query: 279 PL 280
            L
Sbjct: 221 QL 222


>gi|295860509|gb|ADG55431.1| CG32687 [Drosophila melanogaster]
          Length = 178

 Score =  117 bits (293), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/177 (44%), Positives = 102/177 (57%), Gaps = 19/177 (10%)

Query: 10  SSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLS 69
           +SDSSD+DS +    KTLDF   SLD  TL   +   P     K   +I+T+LL HN L 
Sbjct: 5   TSDSSDTDSREQ---KTLDFGRMSLDLVTLEDHLAS-PQKALLKSSGDIETMLLNHNRLV 60

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKD-MSNLKN- 127
             P    +F NL+ LDLS+N IT LP A+   PL TLIA+NNLLT  SLPK  ++ + N 
Sbjct: 61  ALPRLLLQFGNLKILDLSSNAITTLPDAVCQLPLVTLIAKNNLLTNASLPKSLLTKMANG 120

Query: 128 -------------LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
                        LK  NLSGNQL  FP Q+ ++  LKYLYLG N ++ V ++I K+
Sbjct: 121 NGNVNATGGTNSTLKELNLSGNQLTHFPEQVTELRHLKYLYLGGNKISSVSKDIWKM 177


>gi|421094636|ref|ZP_15555352.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410362698|gb|EKP13735.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|456891450|gb|EMG02161.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 331

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/239 (37%), Positives = 115/239 (48%), Gaps = 26/239 (10%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA-------- 115
           HN L   P +  K   LR LDL  N++T LP+ I     L+ L    N  T         
Sbjct: 51  HNKLKTLPKDIGKLKKLRVLDLRGNQLTTLPKEIEQLQNLTELNLNKNQFTTIPNEIGYL 110

Query: 116 -------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLN 162
                        ++LPKD+  LKNL+V +LS N+L   P +I  +  L+ LYL  N L 
Sbjct: 111 KNLQELHIGGNQLKTLPKDIGKLKNLQVLHLSNNKLATLPNEIRKLQNLQKLYLSENQLT 170

Query: 163 HVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKS 222
            +P EI KL  L  L L  N LT +P+  G L  L+ L L  NQL  LP  I  L+ L  
Sbjct: 171 ILPEEIGKLKNLTKLDLNYNELTTLPNEIGKLQNLQELTLGYNQLTVLPKEIRELQKLTV 230

Query: 223 LLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L L  N+ +TLP EI  L    +KL  L L +N+L+  P EI  LK L  L L  N L 
Sbjct: 231 LYLSYNQFKTLPKEIGEL----QKLTVLYLRSNQLKMFPNEIGKLKELESLDLSHNQLT 285



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 70/167 (41%), Positives = 94/167 (56%), Gaps = 4/167 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++LPKD+  LK L+V +L GNQL   P +I  +  L  L L  N    +P EI  L  L 
Sbjct: 55  KTLPKDIGKLKKLRVLDLRGNQLTTLPKEIEQLQNLTELNLNKNQFTTIPNEIGYLKNLQ 114

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L +GGN L  +P   G L  L+ L LS+N+L +LP  I  L+ L+ L L  N+L  LP 
Sbjct: 115 ELHIGGNQLKTLPKDIGKLKNLQVLHLSNNKLATLPNEIRKLQNLQKLYLSENQLTILPE 174

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           EI  LK L++    L L+ N+L TLP EI  L+ L EL+L  N L +
Sbjct: 175 EIGKLKNLTK----LDLNYNELTTLPNEIGKLQNLQELTLGYNQLTV 217



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 87/245 (35%), Positives = 120/245 (48%), Gaps = 19/245 (7%)

Query: 16  SDSFKTVSIKTLDFSYSSLDSETLATQIELLPN--------NDYNKKP------ENIDTL 61
            D  K   ++ LD   + L   TL  +IE L N        N +   P      +N+  L
Sbjct: 59  KDIGKLKKLRVLDLRGNQLT--TLPKEIEQLQNLTELNLNKNQFTTIPNEIGYLKNLQEL 116

Query: 62  LLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPK 120
            +  N L   P +  K  NL+ L LSNN++  LP  I     L  L    N LT   LP+
Sbjct: 117 HIGGNQLKTLPKDIGKLKNLQVLHLSNNKLATLPNEIRKLQNLQKLYLSENQLTI--LPE 174

Query: 121 DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
           ++  LKNL   +L+ N+L   P +I  +  L+ L LG N L  +P+EI +L KL VL L 
Sbjct: 175 EIGKLKNLTKLDLNYNELTTLPNEIGKLQNLQELTLGYNQLTVLPKEIRELQKLTVLYLS 234

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
            N    +P   G+L +L  L L  NQL+  P  I  LK L+SL L +N+L TLP EI  L
Sbjct: 235 YNQFKTLPKEIGELQKLTVLYLRSNQLKMFPNEIGKLKELESLDLSHNQLTTLPKEIGEL 294

Query: 241 KCLSE 245
           + L +
Sbjct: 295 QNLRK 299



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 55/124 (44%), Positives = 71/124 (57%), Gaps = 4/124 (3%)

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P++I KL KL VL L GN LT +P     L  L  L L+ NQ  ++P  I  LK
Sbjct: 52  NKLKTLPKDIGKLKKLRVLDLRGNQLTTLPKEIEQLQNLTELNLNKNQFTTIPNEIGYLK 111

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+ L +  N+L+TLP +I  LK     L+ L L NNKL TLP EI  L+ L +L L +N
Sbjct: 112 NLQELHIGGNQLKTLPKDIGKLK----NLQVLHLSNNKLATLPNEIRKLQNLQKLYLSEN 167

Query: 279 PLVI 282
            L I
Sbjct: 168 QLTI 171


>gi|355779520|gb|EHH63996.1| Malignant fibrous histiocytoma-amplified sequence with leucine-rich
           tandem repeats 1, partial [Macaca fascicularis]
          Length = 944

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/217 (35%), Positives = 118/217 (54%), Gaps = 7/217 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSN 124
           N L+  PD+ S  + LR+LD+ +N++T  P+ +     L  L   +N L    LP+D+S 
Sbjct: 60  NRLTHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRL--RGLPEDISA 117

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L  LK+  LSG +L   P    ++ +L+ L L NN L  +P + ++L +L +L+L  N L
Sbjct: 118 LCALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLL 177

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
            + P     L  LE L LS NQL S+P+ IS L  L +L L NN++R LP  I+ L  L 
Sbjct: 178 EEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLE 237

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           E    L+L  N++  LP     L  +    ++DNPL+
Sbjct: 238 E----LVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLI 270



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 112/239 (46%), Gaps = 43/239 (17%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM 122
           L HN L   P        L  LD+S NR+THLP +                        +
Sbjct: 34  LSHNQLPALPAQLGALARLEELDVSFNRLTHLPDS------------------------L 69

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
           S L  L+  ++  NQL  FP Q+L +  L+ L + +N L  +P +I+ LC L +L L G 
Sbjct: 70  SCLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALKILWLSGA 129

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            L  +P  F +L  LE+L+L +N L++LPA  S L+ LK L L +N L   P  ++ L  
Sbjct: 130 ELGTLPAGFCELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAG 189

Query: 243 LSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           L E                   +L +L L NN++R LP  I+ L  L EL L+ N + +
Sbjct: 190 LEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAV 248



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/205 (32%), Positives = 97/205 (47%), Gaps = 26/205 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF--------------- 101
            + TL + HN L+ FP    +   L  LD+S+NR+  LP+ I+                 
Sbjct: 74  RLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALCALKILWLSGAELGT 133

Query: 102 ---------PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                     L +L+  NN L A  LP   S L+ LK+ NLS N LE+FP  +L +  L+
Sbjct: 134 LPAGFCELASLESLMLDNNGLQA--LPAQFSRLQRLKMLNLSSNLLEEFPAALLPLAGLE 191

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYL  N L  VP  I+ L +L  L L  N +  +PD+  +L  LE L+L  NQ+  LP 
Sbjct: 192 ELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPD 251

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEI 237
           +   L  +    + +N L   P E+
Sbjct: 252 NFGQLSRVGLWKIKDNPLIQPPYEV 276



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 67/199 (33%), Positives = 93/199 (46%), Gaps = 27/199 (13%)

Query: 80  NLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
           +L  LD+S+NR+T L   +                       +S L+ L+  NLS NQL 
Sbjct: 4   HLTELDVSHNRLTALGAEV-----------------------VSALRELRKLNLSHNQLP 40

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
             P Q+  +  L+ L +  N L H+P  ++ L +L  L +  N LT  P     L  LE 
Sbjct: 41  ALPAQLGALARLEELDVSFNRLTHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEE 100

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRT 259
           L +S N+L  LP  IS L  LK L L   +L TLP       C    L+SL+L NN L+ 
Sbjct: 101 LDVSSNRLRGLPEDISALCALKILWLSGAELGTLPAGF----CELASLESLMLDNNGLQA 156

Query: 260 LPTEIITLKCLSELSLRDN 278
           LP +   L+ L  L+L  N
Sbjct: 157 LPAQFSRLQRLKMLNLSSN 175


>gi|295860491|gb|ADG55422.1| CG32687 [Drosophila melanogaster]
 gi|295860493|gb|ADG55423.1| CG32687 [Drosophila melanogaster]
 gi|295860495|gb|ADG55424.1| CG32687 [Drosophila melanogaster]
 gi|295860515|gb|ADG55434.1| CG32687 [Drosophila melanogaster]
          Length = 178

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/177 (45%), Positives = 101/177 (57%), Gaps = 19/177 (10%)

Query: 10  SSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLS 69
           +SDSSD+DS +    KTLDF   SLD  TL   +   P     K   +I+T+LL HN L 
Sbjct: 5   TSDSSDTDSREQ---KTLDFGRMSLDLVTLEDHLAS-PQKALLKSSGDIETMLLNHNRLV 60

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKD----MSNL 125
             P    +F NL+ LDLS+N IT LP A+   PL TLIA+NNLLT  SLPK     M+N 
Sbjct: 61  GLPRLLLQFGNLKILDLSSNAITTLPDAVCQLPLVTLIAKNNLLTNASLPKSLLTKMANG 120

Query: 126 KN-----------LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
                        LK  NLSGNQL  FP Q+ ++  LKYLYLG N ++ V ++I K+
Sbjct: 121 NGNVNATGGTNSTLKELNLSGNQLTHFPEQVTELRHLKYLYLGGNKISSVSKDIWKM 177


>gi|297682314|ref|XP_002818869.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Pongo abelii]
          Length = 1029

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 118/241 (48%), Gaps = 26/241 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA------ 115
           L HN L   P       +L  LD+S NR+ HLP +++    L TL   +N LTA      
Sbjct: 142 LSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLL 201

Query: 116 ---------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                            LP+D+S L+ LK+  LSG +L   P    ++ +L+ L L NN 
Sbjct: 202 QLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNG 261

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P + + L +L +L+L  N   + P     L  LE L LS NQL S+P+ IS L  L
Sbjct: 262 LRALPAQFSSLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRL 321

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DNPL
Sbjct: 322 LTLWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDNFGQLSRVGLWKIKDNPL 377

Query: 281 V 281
           +
Sbjct: 378 I 378



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 82/251 (32%), Positives = 116/251 (46%), Gaps = 33/251 (13%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +I+ L L +N L   P+   S   +LR L L  NR   LP A+      L+ L   +N L
Sbjct: 64  DIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 123

Query: 114 TAESLPKDM-SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           TA  L  D+ S L+ L+  NLS NQL   P Q+  +  L+ L +  N L H+P  ++ L 
Sbjct: 124 TA--LGADVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLS 181

Query: 173 KLHVLSLGGNSLT-----------------------DIPDTFGDLYQLEALILSDNQLES 209
           +L  L +  N LT                        +P+    L  L+ L LS  +L +
Sbjct: 182 RLRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGT 241

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           LPA    L  L+SL+L NN LR LP +  +L    ++LK L L +N     P  ++ L  
Sbjct: 242 LPAGFCELASLESLMLDNNGLRALPAQFSSL----QRLKMLNLSSNLFEEFPAALLPLAG 297

Query: 270 LSELSLRDNPL 280
           L EL L  N L
Sbjct: 298 LEELYLSRNQL 308



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 86/173 (49%), Gaps = 3/173 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L   P++ S    L+ L LS   +  LP        L +L+  NN L A  LP   S+
Sbjct: 214 NRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLRA--LPAQFSS 271

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ LK+ NLS N  E+FP  +L +  L+ LYL  N L  VP  I+ L +L  L L  N +
Sbjct: 272 LQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRI 331

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
             +PD+  +L  LE L+L  NQ+  LP +   L  +    + +N L   P E+
Sbjct: 332 RYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEV 384



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 74/142 (52%), Gaps = 7/142 (4%)

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILD-IPTLKYLYLGNNSLNHVPREINKLC-KLHVLSLG 180
           +NL +++  NL  N LE+ P  +   + +L+ L L  N    +P  + +L   L  L + 
Sbjct: 60  ANLGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVS 119

Query: 181 GNSLTDI-PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
            N LT +  D    L +L  L LS NQL +LPA +  L  L+ L +  N+L  LP    +
Sbjct: 120 HNRLTALGADVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPD---S 176

Query: 240 LKCLSEKLKSLLLHNNKLRTLP 261
           L CLS +L++L + +N+L   P
Sbjct: 177 LSCLS-RLRTLDVDHNQLTAFP 197


>gi|359685883|ref|ZP_09255884.1| hypothetical protein Lsan2_14973 [Leptospira santarosai str.
           2000030832]
          Length = 312

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 127/228 (55%), Gaps = 7/228 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N+  L L  N ++  P    +  NL+ LDLS+NR+T LP  I N   L  L    N 
Sbjct: 47  KLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTSLPMEIGNLKNLEILTLYRNR 106

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           ++   LPK   +L+NLK+  LS N+  +FP +IL +  L++L    N L  +P  + +L 
Sbjct: 107 ISI--LPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKELPERLGQLQ 164

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L++L L GN L  +P +F +L  L++L L+ N+ +  P  + +LK L+ L L  N+L  
Sbjct: 165 NLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKELISLKNLEILELTGNQLIF 224

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           LP EI TL    +KL+ L L  N+L+ +P+ I  L+ L  L L++N L
Sbjct: 225 LPEEIGTL----DKLRVLFLEGNQLKQIPSGIEKLQNLESLYLQENQL 268



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/191 (36%), Positives = 100/191 (52%), Gaps = 3/191 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L LY N +S  P +     NL+ L LS N+    P+ I     L  L    N L 
Sbjct: 95  KNLEILTLYRNRISILPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRL- 153

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            + LP+ +  L+NL +  L GN+L+  P    ++ +LK L L  N     P+E+  L  L
Sbjct: 154 -KELPERLGQLQNLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKELISLKNL 212

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L GN L  +P+  G L +L  L L  NQL+ +P+ I  L+ L+SL L  N+L TLP
Sbjct: 213 EILELTGNQLIFLPEEIGTLDKLRVLFLEGNQLKQIPSGIEKLQNLESLYLQENQLTTLP 272

Query: 235 TEIITLKCLSE 245
            EI  L+ L E
Sbjct: 273 EEIGFLQNLQE 283



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 62/169 (36%), Positives = 87/169 (51%), Gaps = 3/169 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N    FP+   +  NL  LD + NR+  LP+ +     L+ L    N L 
Sbjct: 118 QNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKELPERLGQLQNLNILYLLGNELK 177

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP   S L++LK  NL+ N+ + FP +++ +  L+ L L  N L  +P EI  L KL
Sbjct: 178 V--LPSSFSELQSLKSLNLNYNRFQVFPKELISLKNLEILELTGNQLIFLPEEIGTLDKL 235

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL 223
            VL L GN L  IP     L  LE+L L +NQL +LP  I  L+ L+ L
Sbjct: 236 RVLFLEGNQLKQIPSGIEKLQNLESLYLQENQLTTLPEEIGFLQNLQEL 284



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/131 (38%), Positives = 70/131 (53%), Gaps = 4/131 (3%)

Query: 150 TLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            ++ L L +  L      I KL  L  L+LG N +T +P   G+L  L+ L LSDN+L S
Sbjct: 27  VVRVLALDSFDLKSFTEAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTS 86

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           LP  I NLK L+ L L+ N++  LP   ++L    + LK L L  NK R  P EI+ L+ 
Sbjct: 87  LPMEIGNLKNLEILTLYRNRISILPKHFLSL----QNLKILYLSQNKFRKFPEEILQLQN 142

Query: 270 LSELSLRDNPL 280
           L  L   +N L
Sbjct: 143 LEWLDFNENRL 153



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 4/188 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           +S  + +  L+NLK  NL  NQ+   P +I ++  LK L L +N L  +P EI  L  L 
Sbjct: 39  KSFTEAIVKLRNLKELNLGRNQITSLPKEIGELQNLKELDLSDNRLTSLPMEIGNLKNLE 98

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L+L  N ++ +P  F  L  L+ L LS N+    P  I  L+ L+ L  + N+L+ LP 
Sbjct: 99  ILTLYRNRISILPKHFLSLQNLKILYLSQNKFRKFPEEILQLQNLEWLDFNENRLKELPE 158

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
            +  L+ L+     L L  N+L+ LP+    L+ L  L+L  N   +     ++ K   +
Sbjct: 159 RLGQLQNLN----ILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKELISLKNLEI 214

Query: 296 LELASRTL 303
           LEL    L
Sbjct: 215 LELTGNQL 222



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/133 (35%), Positives = 69/133 (51%), Gaps = 4/133 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N L   P + S+  +L+SL+L+ NR    P+ + +   L  L    N L 
Sbjct: 164 QNLNILYLLGNELKVLPSSFSELQSLKSLNLNYNRFQVFPKELISLKNLEILELTGNQLI 223

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP+++  L  L+V  L GNQL+Q P  I  +  L+ LYL  N L  +P EI  L  L
Sbjct: 224 F--LPEEIGTLDKLRVLFLEGNQLKQIPSGIEKLQNLESLYLQENQLTTLPEEIGFLQNL 281

Query: 175 HVLSL-GGNSLTD 186
             L L G NS ++
Sbjct: 282 QELDLQGSNSFSE 294



 Score = 39.3 bits (90), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 35/97 (36%), Positives = 49/97 (50%), Gaps = 4/97 (4%)

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           D+     D   +  L L    L+S   +I  L+ LK L L  N++ +LP EI  L    +
Sbjct: 17  DLKSALEDPNVVRVLALDSFDLKSFTEAIVKLRNLKELNLGRNQITSLPKEIGEL----Q 72

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            LK L L +N+L +LP EI  LK L  L+L  N + I
Sbjct: 73  NLKELDLSDNRLTSLPMEIGNLKNLEILTLYRNRISI 109


>gi|359459073|ref|ZP_09247636.1| GTPase [Acaryochloris sp. CCMEE 5410]
          Length = 1082

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/242 (37%), Positives = 128/242 (52%), Gaps = 15/242 (6%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L +N L+  P   ++  NL  L LSNN+ T++P  +T+   L  L   +N LT  S+P +
Sbjct: 67  LSNNQLTSLPPELAQLKNLTLLYLSNNQFTNIPLELTHLVNLRELDCHSNQLT--SVPPE 124

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +++L+NL   +L  NQL   P ++  +  LK LYL  N L H+P+E+ +L  L +LSL  
Sbjct: 125 LAHLENLNKLDLRDNQLTSVPPELAHLENLKELYLSANQLTHIPQELAQLRNLTLLSLSA 184

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N LT +P     L  LE L L  NQL SLP  +++L  L+ L L +NKL  +P E+  L 
Sbjct: 185 NQLTGVPPALAHLENLEVLSLRTNQLTSLPPELAHLANLRELYLRSNKLINVPPELAHL- 243

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASR 301
              E L  L L  N+L +LP E   LK L EL L  N         +T  PP   +L + 
Sbjct: 244 ---EHLTLLSLSYNQLTSLPPEFAQLKNLKELHLSGN--------QLTSLPPEFAQLKNL 292

Query: 302 TL 303
           T 
Sbjct: 293 TW 294



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 87/237 (36%), Positives = 128/237 (54%), Gaps = 10/237 (4%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIA-RNNLLT 114
           EN++ L L  N L+  P   +   NL+ L LS N++TH+PQ +      TL++   N LT
Sbjct: 129 ENLNKLDLRDNQLTSVPPELAHLENLKELYLSANQLTHIPQELAQLRNLTLLSLSANQLT 188

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P  +++L+NL+V +L  NQL   P ++  +  L+ LYL +N L +VP E+  L  L
Sbjct: 189 G--VPPALAHLENLEVLSLRTNQLTSLPPELAHLANLRELYLRSNKLINVPPELAHLEHL 246

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +LSL  N LT +P  F  L  L+ L LS NQL SLP   + LK L  L L +N+L  LP
Sbjct: 247 TLLSLSYNQLTSLPPEFAQLKNLKELHLSGNQLTSLPPEFAQLKNLTWLYLRSNQLANLP 306

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEII---TLKCLSELSLRDNPLVIRFVSDM 288
            E   LK L+E    L L +N+L  +  EI+   T   L  L  +   +  +++S M
Sbjct: 307 PEFAQLKNLTE----LDLRDNQLSNISPEILAQGTAAILGHLQEQLQEVRPQWISKM 359



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 60/187 (32%), Positives = 92/187 (49%), Gaps = 12/187 (6%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +L + +   K      LS   L   P+ +  +  L  + L NN L  VP E+ +L KL  
Sbjct: 5   TLQRQLEQAKQTGELYLSDEDLTNVPLALAKLDNLTLISLSNNQLTSVPPELAQLRKLTA 64

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N LT +P     L  L  L LS+NQ  ++P  +++L  L+ L  H+N+L ++P E
Sbjct: 65  LDLSNNQLTSLPPELAQLKNLTLLYLSNNQFTNIPLELTHLVNLRELDCHSNQLTSVPPE 124

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
           +  L    E L  L L +N+L ++P E+  L+ L EL L  N         +T+ P  L 
Sbjct: 125 LAHL----ENLNKLDLRDNQLTSVPPELAHLENLKELYLSAN--------QLTHIPQELA 172

Query: 297 ELASRTL 303
           +L + TL
Sbjct: 173 QLRNLTL 179


>gi|295860483|gb|ADG55418.1| CG32687 [Drosophila melanogaster]
          Length = 178

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 80/177 (45%), Positives = 101/177 (57%), Gaps = 19/177 (10%)

Query: 10  SSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLS 69
           +SDSSD+DS +    KTLDF   SLD  TL   +   P     K   +I+T+LL HN L 
Sbjct: 5   TSDSSDTDSREQ---KTLDFGRMSLDLVTLEDHLAS-PQKALLKSSGDIETMLLNHNRLV 60

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKD----MSNL 125
             P    +F NL+ LDLS+N IT LP A+   PL TLIA+NNLLT  SLPK     M+N 
Sbjct: 61  GLPRLLLQFGNLKILDLSSNAITTLPDAVCQLPLVTLIAKNNLLTNASLPKSLLTKMANG 120

Query: 126 KN-----------LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
                        LK  NLSGNQL  FP Q+ ++  LKYLYLG N ++ V ++I K+
Sbjct: 121 NGNSNATGGTNSTLKELNLSGNQLTHFPEQVTELRHLKYLYLGGNKISSVSKDIWKM 177


>gi|345781592|ref|XP_532819.3| PREDICTED: LOW QUALITY PROTEIN: malignant fibrous
           histiocytoma-amplified sequence 1 [Canis lupus
           familiaris]
          Length = 1043

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 119/241 (49%), Gaps = 26/241 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA------ 115
           L HN L   P       +L  LD+S NR+ HLP +++    L TL   +N LTA      
Sbjct: 133 LSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLLRLRTLDVDHNQLTAFPRQLL 192

Query: 116 ---------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                            LP+D+S L+ LK+  LSG +L   P    ++ +L+ L L NN 
Sbjct: 193 QLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDNNG 252

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P + ++L +L +L+L  N   + P     L  LE L LS NQL S+P+ IS L  L
Sbjct: 253 LRALPAQFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRL 312

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DNPL
Sbjct: 313 LTLWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDNFGQLSRVGLWKIKDNPL 368

Query: 281 V 281
           +
Sbjct: 369 I 369



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 85/173 (49%), Gaps = 3/173 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L   P++ S    L+ L LS   +  LP        L +L+  NN L A  LP   S 
Sbjct: 205 NRLRGLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLRA--LPAQFSR 262

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ LK+ NLS N  E+FP  +L +  L+ LYL  N L  VP  I+ L +L  L L  N +
Sbjct: 263 LQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRI 322

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
             +PD+  +L  LE L+L  NQ+  LP +   L  +    + +N L   P E+
Sbjct: 323 RYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEV 375



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/113 (34%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 171 LCKLHVLSLGGNSLTDIPDTFG-DLYQLEALILSDNQLESLPASISNLK-MLKSLLLHNN 228
           L  + VL+LG N   ++PD  G  L  L  L+L  N+   LPA+++ L   L  L + +N
Sbjct: 53  LADVEVLNLGNNKXDEVPDGLGAALCSLRVLVLRRNRFARLPAAVAELGPRLTELDVSHN 112

Query: 229 KLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +L  L  E ++   L E L+ L L +N+L  LP ++  L  L EL +  N L 
Sbjct: 113 RLSALGAEAVS--ALRE-LRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLA 162


>gi|359683882|ref|ZP_09253883.1| hypothetical protein Lsan2_04024, partial [Leptospira santarosai
           str. 2000030832]
          Length = 225

 Score =  117 bits (292), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/172 (45%), Positives = 103/172 (59%), Gaps = 6/172 (3%)

Query: 110 NNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREIN 169
           NN LT    P+++  L+NLK  +L+ NQL+  P +I  +  LK+LYL  N L  +P+EI 
Sbjct: 47  NNQLTI--FPREIGTLQNLKYLSLANNQLKTLPKEIGTLQKLKWLYLSENQLKTLPKEIE 104

Query: 170 KLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
            L KL  L L  N L  +P   G L  LE L L  NQL +LP+ I  L+ LK L L +N+
Sbjct: 105 TLQKLKWLYLSENQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLKRLHLEHNQ 164

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L TLP EI TL+ L E    L L NN+LR LP EI TL+ L +LS+ +N L+
Sbjct: 165 LITLPQEIGTLQDLEE----LNLANNQLRILPKEIGTLQHLQDLSVFNNQLI 212



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/193 (42%), Positives = 110/193 (56%), Gaps = 7/193 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           ++R+LDL NN++T  P+ I     L  L   NN L  ++LPK++  L+ LK   LS NQL
Sbjct: 39  DVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQL--KTLPKEIGTLQKLKWLYLSENQL 96

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
           +  P +I  +  LK+LYL  N L  +P+EI  L  L VL L  N L  +P   G L  L+
Sbjct: 97  KTLPKEIETLQKLKWLYLSENQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIGKLRSLK 156

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L L  NQL +LP  I  L+ L+ L L NN+LR LP EI TL    + L+ L + NN+L 
Sbjct: 157 RLHLEHNQLITLPQEIGTLQDLEELNLANNQLRILPKEIGTL----QHLQDLSVFNNQLI 212

Query: 259 TLPTEIITLKCLS 271
           TLP EI  L+ L 
Sbjct: 213 TLPQEIGKLQNLK 225



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 74/164 (45%), Positives = 97/164 (59%), Gaps = 10/164 (6%)

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P D+ NL      +L  NQL  FP +I  +  LKYL L NN L  +P+EI  L KL  L 
Sbjct: 37  PMDVRNL------DLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIGTLQKLKWLY 90

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           L  N L  +P     L +L+ L LS+NQL++LP  I  L+ L+ L L+ N+LRTLP+EI 
Sbjct: 91  LSENQLKTLPKEIETLQKLKWLYLSENQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSEIG 150

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            L+     LK L L +N+L TLP EI TL+ L EL+L +N L I
Sbjct: 151 KLRS----LKRLHLEHNQLITLPQEIGTLQDLEELNLANNQLRI 190



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/197 (38%), Positives = 104/197 (52%), Gaps = 3/197 (1%)

Query: 49  NDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLI 107
           N+  K P ++  L L +N L+ FP       NL+ L L+NN++  LP+ I     L  L 
Sbjct: 31  NEALKNPMDVRNLDLVNNQLTIFPREIGTLQNLKYLSLANNQLKTLPKEIGTLQKLKWLY 90

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE 167
              N L  ++LPK++  L+ LK   LS NQL+  P +I  +  L+ L L  N L  +P E
Sbjct: 91  LSENQL--KTLPKEIETLQKLKWLYLSENQLKTLPKEIGTLQNLEVLDLYKNQLRTLPSE 148

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           I KL  L  L L  N L  +P   G L  LE L L++NQL  LP  I  L+ L+ L + N
Sbjct: 149 IGKLRSLKRLHLEHNQLITLPQEIGTLQDLEELNLANNQLRILPKEIGTLQHLQDLSVFN 208

Query: 228 NKLRTLPTEIITLKCLS 244
           N+L TLP EI  L+ L 
Sbjct: 209 NQLITLPQEIGKLQNLK 225


>gi|421117845|ref|ZP_15578200.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410010627|gb|EKO68763.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
          Length = 636

 Score =  116 bits (291), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 86/248 (34%), Positives = 124/248 (50%), Gaps = 22/248 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           + +++L L  N L   P+   +  NL+ L L  N++T  P+ I     L  L    N LT
Sbjct: 112 QKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGRLQNLQDLGLYKNKLT 171

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + PK++  L+NL+   L  N+L  FP +I  +  L+ L+L  N L  +P+EI +L  L
Sbjct: 172 --TFPKEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNL 229

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N  T +P   G L  L+ L L DNQL +LP  I  L+ L+ L L NN+L  LP
Sbjct: 230 QTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVLP 289

Query: 235 TEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            EI  L+ L                    + L++L L NN+L  LP EI  L+ L +L L
Sbjct: 290 KEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLEL 349

Query: 276 RDNPLVIR 283
             NPL ++
Sbjct: 350 LMNPLSLK 357



 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/220 (39%), Positives = 117/220 (53%), Gaps = 5/220 (2%)

Query: 59  DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESL 118
           D  L Y N    FP    KF NLR L L +   + LP+ I+       +A   L   + +
Sbjct: 397 DLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALG-LNGLKKI 455

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P ++  L+NL+  NL  N+LE+ P +I  +  L+ L L  N+L   P EI +L KL  L 
Sbjct: 456 PSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLD 515

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           L  N  T  P   G L  L+ L L  NQL +LPA I  LK L+ L L++N+   LP EI 
Sbjct: 516 LSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIG 575

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            LK    KL++L L NN+L TLPTEI  L+ L  L L++N
Sbjct: 576 KLK----KLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 611



 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/229 (37%), Positives = 123/229 (53%), Gaps = 9/229 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLL 113
           +N+  L L  N L+  P    +  NL+ LDL +N++   P  I     L +L ++ N L+
Sbjct: 66  KNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLI 125

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L+NL+   L  N+L  FP +I  +  L+ L L  N L   P+EI +L  
Sbjct: 126 I---LPNEIGRLQNLQDLGLYKNKLTTFPKEIGRLQNLQDLGLYKNKLTTFPKEIGRLQN 182

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT  P   G L  L+ L LS+N+L +LP  I  LK L++L L NN+   L
Sbjct: 183 LQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTIL 242

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  L    + L++L L +N+L TLP EI  L+ L EL LR+N L +
Sbjct: 243 PKEIGQL----QNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTV 287



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 110/204 (53%), Gaps = 7/204 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           ++R L+LS  ++T LP+ I     L  L  + NLLT  +LPK++  L+NL+  +L  NQL
Sbjct: 44  DVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLT--TLPKEIGQLENLQELDLRDNQL 101

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
             FP  I+++  L+ L L  N L  +P EI +L  L  L L  N LT  P   G L  L+
Sbjct: 102 ATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGRLQNLQ 161

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L L  N+L + P  I  L+ L+ L L+ NKL T P EI  L    + L+ L L  N+L 
Sbjct: 162 DLGLYKNKLTTFPKEIGRLQNLQDLGLYKNKLTTFPKEIGQL----QNLQKLWLSENRLT 217

Query: 259 TLPTEIITLKCLSELSLRDNPLVI 282
            LP EI  LK L  L L++N   I
Sbjct: 218 ALPKEIGQLKNLQTLDLQNNQFTI 241



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 122/274 (44%), Gaps = 47/274 (17%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN--------------- 100
           +N+  L    N L+  P    +  NL++L+L NNR+T LP+ I                 
Sbjct: 296 QNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLS 355

Query: 101 ----------FPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLS---GNQLEQFPIQILD 147
                     FP S L  R           +++  + LKVF+L     N  + FP  IL 
Sbjct: 356 LKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILK 415

Query: 148 IPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQL 207
              L+ LYL +   + +P+EI++L  L  L+LG N L  IP   G L  LEAL L  N+L
Sbjct: 416 FRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANEL 475

Query: 208 ESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLK 248
           E LP  I  L+ L+ L LH N L+  P EI  LK L                    E L+
Sbjct: 476 ERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQ 535

Query: 249 SLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           +L L  N+L  LP EI  LK L EL L DN   +
Sbjct: 536 TLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTV 569



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 112/223 (50%), Gaps = 15/223 (6%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLL 113
           K  N+  L LY    S  P   S+  NL+ L L  N +  +P  I    L  L A N  L
Sbjct: 415 KFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQ--LRNLEALN--L 470

Query: 114 TA---ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
            A   E LPK++  L+NL+  +L  N L+ FP +I  +  L+ L L  N     P+EI K
Sbjct: 471 EANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGK 530

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L  L+L  N LT++P     L  L+ L L+DNQ   LP  I  LK L++L L NN+L
Sbjct: 531 LENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQL 590

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTE----IITLKC 269
            TLPTEI  L    + L+ L L NN+      E    ++ LKC
Sbjct: 591 TTLPTEIGQL----QNLQWLYLQNNQFSFEEQERIRKLLPLKC 629



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/168 (39%), Positives = 90/168 (53%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLSG +L   P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 31  TYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 90

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L   P    +L +LE+L LS+N+L  LP  I  L+ L+ L L+ NKL T 
Sbjct: 91  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 150

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L    + L+ L L+ NKL T P EI  L+ L +L L  N L 
Sbjct: 151 PKEIGRL----QNLQDLGLYKNKLTTFPKEIGRLQNLQDLGLYKNKLT 194



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 4/111 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+     +   +  L LS  +L +LP  I  LK L+ L L  N L 
Sbjct: 20  CEIQAEEVEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLT 79

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           TLP EI  L    E L+ L L +N+L T P  I+ L+ L  L L +N L+I
Sbjct: 80  TLPKEIGQL----ENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLII 126


>gi|418693267|ref|ZP_13254330.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|400356925|gb|EJP13083.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
          Length = 595

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/220 (39%), Positives = 117/220 (53%), Gaps = 5/220 (2%)

Query: 59  DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESL 118
           D  L Y N    FP    KF NLR L L +   + LP+ I+       +A   L   + +
Sbjct: 356 DLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALG-LNGLKKI 414

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P ++  L+NL+  NL  N+LE+ P +I  +  L+ L L  N+L   P EI +L KL  L 
Sbjct: 415 PSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLD 474

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           L  N  T  P   G L  L+ L L  NQL +LPA I  LK L+ L L++N+   LP EI 
Sbjct: 475 LSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIG 534

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            LK    KL++L L NN+L TLPTEI  L+ L  L L++N
Sbjct: 535 KLK----KLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 570



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 125/249 (50%), Gaps = 24/249 (9%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLL 113
           +N+  L L  N L+  P    +  NL+ LDL +N++   P  I     L +L ++ N L+
Sbjct: 71  KNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLI 130

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L+NL+   L  N+L  FP +I  +  L+ L+L  N L  +P+EI +L  
Sbjct: 131 I---LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKN 187

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N  T +P   G L  L+ L L DNQL +LP  I  L+ L+ L L NN+L  L
Sbjct: 188 LQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVL 247

Query: 234 PTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           P EI  L+ L                    + L++L L NN+L  LP EI  L+ L +L 
Sbjct: 248 PKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLE 307

Query: 275 LRDNPLVIR 283
           L  NPL ++
Sbjct: 308 LLMNPLSLK 316



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 123/274 (44%), Gaps = 47/274 (17%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN--------------- 100
           +N+ TL    N L+  P    +  NL++L+L NNR+T LP+ I                 
Sbjct: 255 QNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLS 314

Query: 101 ----------FPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLS---GNQLEQFPIQILD 147
                     FP S L  R           +++  + LKVF+L     N  + FP  IL 
Sbjct: 315 LKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILK 374

Query: 148 IPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQL 207
              L+ LYL +   + +P+EI++L  L  L+LG N L  IP   G L  LEAL L  N+L
Sbjct: 375 FRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANEL 434

Query: 208 ESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLK 248
           E LP  I  L+ L+ L LH N L+  P EI  LK L                    E L+
Sbjct: 435 ERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQ 494

Query: 249 SLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           +L L  N+L  LP EI  LK L EL L DN   +
Sbjct: 495 TLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTV 528



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 112/223 (50%), Gaps = 15/223 (6%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLL 113
           K  N+  L LY    S  P   S+  NL+ L L  N +  +P  I    L  L A N  L
Sbjct: 374 KFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQ--LRNLEALN--L 429

Query: 114 TA---ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
            A   E LPK++  L+NL+  +L  N L+ FP +I  +  L+ L L  N     P+EI K
Sbjct: 430 EANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGK 489

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L  L+L  N LT++P     L  L+ L L+DNQ   LP  I  LK L++L L NN+L
Sbjct: 490 LENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQL 549

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTE----IITLKC 269
            TLPTEI  L    + L+ L L NN+      E    ++ LKC
Sbjct: 550 TTLPTEIGQL----QNLQWLYLQNNQFSFEEQERIRKLLPLKC 588



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/169 (39%), Positives = 90/169 (53%), Gaps = 4/169 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLSG +L   P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 36  TYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L   P    +L +LE+L LS+N+L  LP  I  L+ L+ L L+ NKL T 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  L    + L+ L L  N+L  LP EI  LK L  L L++N   I
Sbjct: 156 PKEIGQL----QNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTI 200



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 4/111 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+     +   +  L LS  +L +LP  I  LK L+ L L  N L 
Sbjct: 25  CEIQAEEVEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLT 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           TLP EI  L    E L+ L L +N+L T P  I+ L+ L  L L +N L+I
Sbjct: 85  TLPKEIGQL----ENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLII 131


>gi|418717432|ref|ZP_13277094.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|410787029|gb|EKR80764.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
          Length = 595

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/220 (39%), Positives = 117/220 (53%), Gaps = 5/220 (2%)

Query: 59  DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESL 118
           D  L Y N    FP    KF NLR L L +   + LP+ I+       +A   L   + +
Sbjct: 356 DLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALG-LNGLKKI 414

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P ++  L+NL+  NL  N+LE+ P +I  +  L+ L L  N+L   P EI +L KL  L 
Sbjct: 415 PSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLD 474

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           L  N  T  P   G L  L+ L L  NQL +LPA I  LK L+ L L++N+   LP EI 
Sbjct: 475 LSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIG 534

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            LK    KL++L L NN+L TLPTEI  L+ L  L L++N
Sbjct: 535 KLK----KLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 570



 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 125/249 (50%), Gaps = 24/249 (9%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLL 113
           +N+  L L  N L+  P    +  NL+ LDL +N++   P  I     L +L ++ N L+
Sbjct: 71  KNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLI 130

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L+NL+   L  N+L  FP +I  +  L+ L+L  N L  +P+EI +L  
Sbjct: 131 I---LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKN 187

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N  T +P   G L  L+ L L DNQL +LP  I  L+ L+ L L NN+L  L
Sbjct: 188 LQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVL 247

Query: 234 PTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           P EI  L+ L                    + L++L L NN+L  LP EI  L+ L +L 
Sbjct: 248 PKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLE 307

Query: 275 LRDNPLVIR 283
           L  NPL ++
Sbjct: 308 LLMNPLSLK 316



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 123/274 (44%), Gaps = 47/274 (17%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN--------------- 100
           +N+ TL    N L+  P    +  NL++L+L NNR+T LP+ I                 
Sbjct: 255 QNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLS 314

Query: 101 ----------FPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLS---GNQLEQFPIQILD 147
                     FP S L  R           +++  + LKVF+L     N  + FP  IL 
Sbjct: 315 LKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILK 374

Query: 148 IPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQL 207
              L+ LYL +   + +P+EI++L  L  L+LG N L  IP   G L  LEAL L  N+L
Sbjct: 375 FRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANEL 434

Query: 208 ESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLK 248
           E LP  I  L+ L+ L LH N L+  P EI  LK L                    E L+
Sbjct: 435 ERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQ 494

Query: 249 SLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           +L L  N+L  LP EI  LK L EL L DN   +
Sbjct: 495 TLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTV 528



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 112/223 (50%), Gaps = 15/223 (6%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLL 113
           K  N+  L LY    S  P   S+  NL+ L L  N +  +P  I    L  L A N  L
Sbjct: 374 KFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQ--LRNLEALN--L 429

Query: 114 TA---ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
            A   E LPK++  L+NL+  +L  N L+ FP +I  +  L+ L L  N     P+EI K
Sbjct: 430 EANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGK 489

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L  L+L  N LT++P     L  L+ L L+DNQ   LP  I  LK L++L L NN+L
Sbjct: 490 LENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQL 549

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTE----IITLKC 269
            TLPTEI  L    + L+ L L NN+      E    ++ LKC
Sbjct: 550 TTLPTEIGQL----QNLQWLYLQNNQFSFEEQERIRKLLPLKC 588



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/169 (39%), Positives = 90/169 (53%), Gaps = 4/169 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLSG +L   P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 36  TYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L   P    +L +LE+L LS+N+L  LP  I  L+ L+ L L+ NKL T 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  L    + L+ L L  N+L  LP EI  LK L  L L++N   I
Sbjct: 156 PKEIGQL----QNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTI 200



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 4/111 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+     +   +  L LS  +L +LP  I  LK L+ L L  N L 
Sbjct: 25  CEIQAEEVEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLT 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           TLP EI  L    E L+ L L +N+L T P  I+ L+ L  L L +N L+I
Sbjct: 85  TLPKEIGQL----ENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLII 131


>gi|296221908|ref|XP_002756980.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Callithrix jacchus]
          Length = 1072

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 119/241 (49%), Gaps = 26/241 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA------ 115
           L HN L   P       +L  LD+S NR+ HLP +++    L TL   +N LTA      
Sbjct: 142 LSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLL 201

Query: 116 ---------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                            LP+D++ L+ LK+  LSG +L   P    ++ +L+ L L NN 
Sbjct: 202 QLAALEELDVSSNRLRGLPEDINALRALKILWLSGAELGTLPAGFCELASLESLMLDNNG 261

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P + ++L +L +L+L  N   + P     L  LE L LS NQL S+P+ IS L  L
Sbjct: 262 LQALPAQFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRL 321

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DNPL
Sbjct: 322 LTLWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDNFGQLSRVGLWKIKDNPL 377

Query: 281 V 281
           +
Sbjct: 378 I 378



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 112/225 (49%), Gaps = 8/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +I+ L L +N L   PD   S   +LR L L  NR   LP A+      L+ L   +N L
Sbjct: 64  DIEALNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFARLPSAVAELGHHLTELDVSHNRL 123

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA    + +S L+ L+  NLS NQL   P Q+  +  L+ L +  N L H+P  ++ L +
Sbjct: 124 TALGA-EVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSR 182

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L +  N LT  P     L  LE L +S N+L  LP  I+ L+ LK L L   +L TL
Sbjct: 183 LRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDINALRALKILWLSGAELGTL 242

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P       C    L+SL+L NN L+ LP +   L+ L  L+L  N
Sbjct: 243 PAGF----CELASLESLMLDNNGLQALPAQFSRLQRLKMLNLSSN 283



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 85/173 (49%), Gaps = 3/173 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L   P++ +    L+ L LS   +  LP        L +L+  NN L A  LP   S 
Sbjct: 214 NRLRGLPEDINALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQA--LPAQFSR 271

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ LK+ NLS N  E+FP  +L +  L+ LYL  N L  VP  I+ L +L  L L  N +
Sbjct: 272 LQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRI 331

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
             +PD+  +L  LE L+L  NQ+  LP +   L  +    + +N L   P E+
Sbjct: 332 RYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEV 384



 Score = 52.0 bits (123), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 7/142 (4%)

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILD-IPTLKYLYLGNNSLNHVPREINKLC-KLHVLSLG 180
           +NL +++  NL  N LE+ P  +   + +L+ L L  N    +P  + +L   L  L + 
Sbjct: 60  ANLGDIEALNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFARLPSAVAELGHHLTELDVS 119

Query: 181 GNSLTDI-PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
            N LT +  +    L +L  L LS NQL +LPA +  L  L+ L +  N+L  LP    +
Sbjct: 120 HNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPD---S 176

Query: 240 LKCLSEKLKSLLLHNNKLRTLP 261
           L CLS +L++L + +N+L   P
Sbjct: 177 LSCLS-RLRTLDVDHNQLTAFP 197



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 60/113 (53%), Gaps = 5/113 (4%)

Query: 171 LCKLHVLSLGGNSLTDIPDTFGD-LYQLEALILSDNQLESLPASISNLKM-LKSLLLHNN 228
           L  +  L+LG N L ++PD  G  L  L  L+L  N+   LP++++ L   L  L + +N
Sbjct: 62  LGDIEALNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFARLPSAVAELGHHLTELDVSHN 121

Query: 229 KLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +L  L  E+++   L E L+ L L +N+L  LP ++  L  L EL +  N L 
Sbjct: 122 RLTALGAEVVS--ALRE-LRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLA 171


>gi|45657380|ref|YP_001466.1| hypothetical protein LIC11505 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421087857|ref|ZP_15548692.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102412|ref|ZP_15563016.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45600619|gb|AAS70103.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410367526|gb|EKP22910.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410429598|gb|EKP73974.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 572

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 121/249 (48%), Gaps = 22/249 (8%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLL 113
           P N+  L L   N +  P    +  NL+ LDL +N++   P  I     L +L    N L
Sbjct: 47  PLNVRVLDLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSENRL 106

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L+NL+   L  N+L  FP +I  +  L+ L+L  N L  +P+EI +L  
Sbjct: 107 VM--LPNEIGRLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKN 164

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N  T +P   G L  L+ L L DNQL +LP  I  L+ L+ L L NN+L  L
Sbjct: 165 LQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVL 224

Query: 234 PTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           P EI  L+ L                    + L++L L NN+L  LP EI  L+ L +L 
Sbjct: 225 PKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLE 284

Query: 275 LRDNPLVIR 283
           L  NPL ++
Sbjct: 285 LLMNPLSLK 293



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 87/225 (38%), Positives = 120/225 (53%), Gaps = 5/225 (2%)

Query: 59  DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESL 118
           D  L Y N    FP    KF NLR L L +   + LP+ I+       +A   L   +++
Sbjct: 333 DLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALG-LNGLKNI 391

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P ++  LKNL+  NL  N+LE+ P +I  +  L+ L L  N+L   P EI +L KL  L 
Sbjct: 392 PSEIGQLKNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLD 451

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           L  N  T  P   G L  L+ L L  NQL +L A I  L+ L+ L L++N+   LP EI 
Sbjct: 452 LSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIG 511

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
            LK    KL++L L NN+L TLPTEI  L+ L  L L++N L ++
Sbjct: 512 KLK----KLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLK 552



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 112/221 (50%), Gaps = 11/221 (4%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N+  L LY    S  P   S+  NL+ L L  N + ++P  I     L  L    N 
Sbjct: 351 KFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE 410

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L  E LPK++  L+NL+  +L  N L+ FP +I  +  L+ L L  N     P+EI KL 
Sbjct: 411 L--ERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLE 468

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L+L  N LT++    G L  L+ L L+DNQ   LP  I  LK L++L L NN+L T
Sbjct: 469 NLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTT 528

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTE----IITLKC 269
           LPTEI  L    + L+ L L NN+L     E    ++ LKC
Sbjct: 529 LPTEIGQL----QNLQWLYLQNNQLSLKEQERIRKLLPLKC 565



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 88/254 (34%), Positives = 121/254 (47%), Gaps = 32/254 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN--------------- 100
           +N+ TL    N L+  P    +  NL++L+L NNR+T LP+ I                 
Sbjct: 232 QNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLS 291

Query: 101 ----------FPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLS---GNQLEQFPIQILD 147
                     FP S L  R           +++  + LKVF+L     N  + FP  IL 
Sbjct: 292 LKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILK 351

Query: 148 IPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQL 207
              L+ LYL +   + +P+EI++L  L  L+LG N L +IP   G L  LEAL L  N+L
Sbjct: 352 FRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANEL 411

Query: 208 ESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITL 267
           E LP  I  L+ L+ L LH N L+  P EI  LK    KL+ L L  N+  T P EI  L
Sbjct: 412 ERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLK----KLQKLDLSVNQFTTFPKEIGKL 467

Query: 268 KCLSELSLRDNPLV 281
           + L  L+L+ N L 
Sbjct: 468 ENLQTLNLQRNQLT 481



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 4/110 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+     +   +  L LS     +LP  I  LK L+ L L +N+L 
Sbjct: 25  CEIQADEVKPGTYMDLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQELDLRDNQLA 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           T P  I+ L    +KL+SL L  N+L  LP EI  L+ L EL L  N L 
Sbjct: 85  TFPAVIVEL----QKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKLT 130


>gi|110825984|ref|NP_004216.2| malignant fibrous histiocytoma-amplified sequence 1 [Homo sapiens]
 gi|296437367|sp|Q9Y4C4.2|MFHA1_HUMAN RecName: Full=Malignant fibrous histiocytoma-amplified sequence 1;
           AltName: Full=Malignant fibrous histiocytoma-amplified
           sequence with leucine-rich tandem repeats 1
 gi|189442857|gb|AAI67810.1| Malignant fibrous histiocytoma amplified sequence 1 [synthetic
           construct]
          Length = 1052

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 122/226 (53%), Gaps = 7/226 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           +++ L +  N L+  PD+ S  + LR+LD+ +N++T  P+ +     L  L   +N L  
Sbjct: 159 HLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRL-- 216

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+D+S L+ LK+  LSG +L   P    ++ +L+ L L NN L  +P + + L +L 
Sbjct: 217 RGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQFSCLQRLK 276

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L+L  N   + P     L  LE L LS NQL S+P+ IS L  L +L L NN++R LP 
Sbjct: 277 MLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPD 336

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            I+ L  L E    L+L  N++  LP     L  +    ++DNPL+
Sbjct: 337 SIVELTGLEE----LVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLI 378



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 112/225 (49%), Gaps = 8/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +I+ L L +N L   P+   S   +LR L L  NR   LP A+      L+ L   +N L
Sbjct: 64  DIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 123

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA    + +S L+ L+  NLS NQL   P Q+  +  L+ L +  N L H+P  ++ L +
Sbjct: 124 TALGA-EVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSR 182

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L +  N LT  P     L  LE L +S N+L  LP  IS L+ LK L L   +L TL
Sbjct: 183 LRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 242

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P       C    L+SL+L NN L+ LP +   L+ L  L+L  N
Sbjct: 243 PAGF----CELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSN 283



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 95/205 (46%), Gaps = 26/205 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF--------------- 101
            + TL + HN L+ FP    +   L  LD+S+NR+  LP+ I+                 
Sbjct: 182 RLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGT 241

Query: 102 ---------PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                     L +L+  NN L A  LP   S L+ LK+ NLS N  E+FP  +L +  L+
Sbjct: 242 LPAGFCELASLESLMLDNNGLQA--LPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLE 299

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYL  N L  VP  I+ L +L  L L  N +  +PD+  +L  LE L+L  NQ+  LP 
Sbjct: 300 ELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPD 359

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEI 237
               L  +    + +N L   P E+
Sbjct: 360 HFGQLSRVGLWKIKDNPLIQPPYEV 384



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 7/161 (4%)

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILD-IPTLKYLYLGNNSLNHVPREINKLC-KLHVLSLG 180
           +NL +++  NL  N LE+ P  +   + +L+ L L  N    +P  + +L   L  L + 
Sbjct: 60  ANLGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVS 119

Query: 181 GNSLTDI-PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
            N LT +  +    L +L  L LS NQL +LPA +  L  L+ L +  N+L  LP    +
Sbjct: 120 HNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPD---S 176

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L CLS +L++L + +N+L   P +++ L  L EL +  N L
Sbjct: 177 LSCLS-RLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRL 216



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 171 LCKLHVLSLGGNSLTDIPDTFGD-LYQLEALILSDNQLESLPASISNLKM-LKSLLLHNN 228
           L  +  L+LG N L ++P+  G  L  L  L+L  N+   LP +++ L   L  L + +N
Sbjct: 62  LGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHN 121

Query: 229 KLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +L  L  E+++   L E L+ L L +N+L  LP ++  L  L EL +  N L 
Sbjct: 122 RLTALGAEVVS--ALRE-LRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLA 171


>gi|4239895|dbj|BAA74737.1| MASL1 [Homo sapiens]
          Length = 1052

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 122/226 (53%), Gaps = 7/226 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           +++ L +  N L+  PD+ S  + LR+LD+ +N++T  P+ +     L  L   +N L  
Sbjct: 159 HLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRL-- 216

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+D+S L+ LK+  LSG +L   P    ++ +L+ L L NN L  +P + + L +L 
Sbjct: 217 RGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQFSCLQRLK 276

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L+L  N   + P     L  LE L LS NQL S+P+ IS L  L +L L NN++R LP 
Sbjct: 277 MLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPD 336

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            I+ L  L E    L+L  N++  LP     L  +    ++DNPL+
Sbjct: 337 SIVELTGLEE----LVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLI 378



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 112/225 (49%), Gaps = 8/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +I+ L L +N L   P+   S   +LR L L  NR   LP A+      L+ L   +N L
Sbjct: 64  DIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 123

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA    + +S L+ L+  NLS NQL   P Q+  +  L+ L +  N L H+P  ++ L +
Sbjct: 124 TALGA-EVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSR 182

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L +  N LT  P     L  LE L +S N+L  LP  IS L+ LK L L   +L TL
Sbjct: 183 LRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 242

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P       C    L+SL+L NN L+ LP +   L+ L  L+L  N
Sbjct: 243 PAGF----CELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSN 283



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 95/205 (46%), Gaps = 26/205 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF--------------- 101
            + TL + HN L+ FP    +   L  LD+S+NR+  LP+ I+                 
Sbjct: 182 RLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGT 241

Query: 102 ---------PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                     L +L+  NN L A  LP   S L+ LK+ NLS N  E+FP  +L +  L+
Sbjct: 242 LPAGFCELASLESLMLDNNGLQA--LPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLE 299

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYL  N L  VP  I+ L +L  L L  N +  +PD+  +L  LE L+L  NQ+  LP 
Sbjct: 300 ELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPD 359

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEI 237
               L  +    + +N L   P E+
Sbjct: 360 HFGQLSRVGLWKIKDNPLIQPPYEV 384



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 7/161 (4%)

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILD-IPTLKYLYLGNNSLNHVPREINKLC-KLHVLSLG 180
           +NL +++  NL  N LE+ P  +   + +L+ L L  N    +P  + +L   L  L + 
Sbjct: 60  ANLGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVS 119

Query: 181 GNSLTDI-PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
            N LT +  +    L +L  L LS NQL +LPA +  L  L+ L +  N+L  LP    +
Sbjct: 120 HNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPD---S 176

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L CLS +L++L + +N+L   P +++ L  L EL +  N L
Sbjct: 177 LSCLS-RLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRL 216



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 171 LCKLHVLSLGGNSLTDIPDTFGD-LYQLEALILSDNQLESLPASISNLKM-LKSLLLHNN 228
           L  +  L+LG N L ++P+  G  L  L  L+L  N+   LP +++ L   L  L + +N
Sbjct: 62  LGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHN 121

Query: 229 KLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +L  L  E+++   L E L+ L L +N+L  LP ++  L  L EL +  N L 
Sbjct: 122 RLTALGAEVVS--ALRE-LRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLA 171


>gi|418703936|ref|ZP_13264818.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410766420|gb|EKR37105.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 595

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/220 (39%), Positives = 117/220 (53%), Gaps = 5/220 (2%)

Query: 59  DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESL 118
           D  L Y N    FP    KF NLR L L +   + LP+ I+       +A   L   + +
Sbjct: 356 DLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALG-LNGLKKI 414

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P ++  L+NL+  NL  N+LE+ P +I  +  L+ L L  N+L   P EI +L KL  L 
Sbjct: 415 PSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLD 474

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           L  N  T  P   G L  L+ L L  NQL +LPA I  LK L+ L L++N+   LP EI 
Sbjct: 475 LSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIG 534

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            LK    KL++L L NN+L TLPTEI  L+ L  L L++N
Sbjct: 535 KLK----KLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 570



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 125/249 (50%), Gaps = 24/249 (9%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLL 113
           +N+  L L  N L+  P    +  NL+ LDL +N++   P  I     L +L ++ N L+
Sbjct: 71  KNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLI 130

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L+NL+   L  N+L  FP +I  +  L+ L+L  N L  +P+EI +L  
Sbjct: 131 I---LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKN 187

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N  T +P   G L  L+ L L DNQL +LP  I  L+ L+ L L NN+L  L
Sbjct: 188 LQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVL 247

Query: 234 PTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           P EI  L+ L                    + L++L L NN+L  LP EI  L+ L +L 
Sbjct: 248 PKEIGQLQNLQMLCSPENRLTAFPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLE 307

Query: 275 LRDNPLVIR 283
           L  NPL ++
Sbjct: 308 LLMNPLSLK 316



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 123/274 (44%), Gaps = 47/274 (17%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN--------------- 100
           +N+  L    N L+ FP    +  NL++L+L NNR+T LP+ I                 
Sbjct: 255 QNLQMLCSPENRLTAFPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLS 314

Query: 101 ----------FPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLS---GNQLEQFPIQILD 147
                     FP S L  R           +++  + LKVF+L     N  + FP  IL 
Sbjct: 315 LKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILK 374

Query: 148 IPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQL 207
              L+ LYL +   + +P+EI++L  L  L+LG N L  IP   G L  LEAL L  N+L
Sbjct: 375 FRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANEL 434

Query: 208 ESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLK 248
           E LP  I  L+ L+ L LH N L+  P EI  LK L                    E L+
Sbjct: 435 ERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQ 494

Query: 249 SLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           +L L  N+L  LP EI  LK L EL L DN   +
Sbjct: 495 TLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTV 528



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 112/223 (50%), Gaps = 15/223 (6%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLL 113
           K  N+  L LY    S  P   S+  NL+ L L  N +  +P  I    L  L A N  L
Sbjct: 374 KFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQ--LRNLEALN--L 429

Query: 114 TA---ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
            A   E LPK++  L+NL+  +L  N L+ FP +I  +  L+ L L  N     P+EI K
Sbjct: 430 EANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGK 489

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L  L+L  N LT++P     L  L+ L L+DNQ   LP  I  LK L++L L NN+L
Sbjct: 490 LENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQL 549

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTE----IITLKC 269
            TLPTEI  L    + L+ L L NN+      E    ++ LKC
Sbjct: 550 TTLPTEIGQL----QNLQWLYLQNNQFSFEEQERIRKLLPLKC 588



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/169 (39%), Positives = 90/169 (53%), Gaps = 4/169 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLSG +L   P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 36  TYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L   P    +L +LE+L LS+N+L  LP  I  L+ L+ L L+ NKL T 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  L    + L+ L L  N+L  LP EI  LK L  L L++N   I
Sbjct: 156 PKEIGQL----QNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTI 200



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 4/111 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+     +   +  L LS  +L +LP  I  LK L+ L L  N L 
Sbjct: 25  CEIQAEEVEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLT 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           TLP EI  L    E L+ L L +N+L T P  I+ L+ L  L L +N L+I
Sbjct: 85  TLPKEIGQL----ENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLII 131


>gi|119585970|gb|EAW65566.1| malignant fibrous histiocytoma amplified sequence 1 [Homo sapiens]
          Length = 1052

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 122/226 (53%), Gaps = 7/226 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           +++ L +  N L+  PD+ S  + LR+LD+ +N++T  P+ +     L  L   +N L  
Sbjct: 159 HLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRL-- 216

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+D+S L+ LK+  LSG +L   P    ++ +L+ L L NN L  +P + + L +L 
Sbjct: 217 RGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQALPAQFSCLQRLK 276

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L+L  N   + P     L  LE L LS NQL S+P+ IS L  L +L L NN++R LP 
Sbjct: 277 MLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPD 336

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            I+ L  L E    L+L  N++  LP     L  +    ++DNPL+
Sbjct: 337 SIVELTGLEE----LVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLI 378



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 112/225 (49%), Gaps = 8/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +I+ L L +N L   P+   S   +LR L L  NR   LP A+      L+ L   +N L
Sbjct: 64  DIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 123

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA    + +S L+ L+  NLS NQL   P Q+  +  L+ L +  N L H+P  ++ L +
Sbjct: 124 TALGA-EVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSR 182

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L +  N LT  P     L  LE L +S N+L  LP  IS L+ LK L L   +L TL
Sbjct: 183 LRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 242

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P       C    L+SL+L NN L+ LP +   L+ L  L+L  N
Sbjct: 243 PAGF----CELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSN 283



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 95/205 (46%), Gaps = 26/205 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF--------------- 101
            + TL + HN L+ FP    +   L  LD+S+NR+  LP+ I+                 
Sbjct: 182 RLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRLRGLPEDISALRALKILWLSGAELGT 241

Query: 102 ---------PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                     L +L+  NN L A  LP   S L+ LK+ NLS N  E+FP  +L +  L+
Sbjct: 242 LPAGFCELASLESLMLDNNGLQA--LPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLE 299

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYL  N L  VP  I+ L +L  L L  N +  +PD+  +L  LE L+L  NQ+  LP 
Sbjct: 300 ELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPD 359

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEI 237
               L  +    + +N L   P E+
Sbjct: 360 HFGQLSRVGLWKIKDNPLIQPPYEV 384



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 52/161 (32%), Positives = 84/161 (52%), Gaps = 7/161 (4%)

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILD-IPTLKYLYLGNNSLNHVPREINKLC-KLHVLSLG 180
           +NL +++  NL  N LE+ P  +   + +L+ L L  N    +P  + +L   L  L + 
Sbjct: 60  ANLGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVS 119

Query: 181 GNSLTDI-PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
            N LT +  +    L +L  L LS NQL +LPA +  L  L+ L +  N+L  LP    +
Sbjct: 120 HNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPD---S 176

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L CLS +L++L + +N+L   P +++ L  L EL +  N L
Sbjct: 177 LSCLS-RLRTLDVDHNQLTAFPRQLLQLVALEELDVSSNRL 216



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 171 LCKLHVLSLGGNSLTDIPDTFGD-LYQLEALILSDNQLESLPASISNLKM-LKSLLLHNN 228
           L  +  L+LG N L ++P+  G  L  L  L+L  N+   LP +++ L   L  L + +N
Sbjct: 62  LGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHN 121

Query: 229 KLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +L  L  E+++   L E L+ L L +N+L  LP ++  L  L EL +  N L 
Sbjct: 122 RLTALGAEVVS--ALRE-LRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLA 171


>gi|157823447|ref|NP_001100786.1| malignant fibrous histiocytoma amplified sequence 1 [Rattus
           norvegicus]
 gi|149057953|gb|EDM09196.1| malignant fibrous histiocytoma amplified sequence 1 (predicted),
           isoform CRA_a [Rattus norvegicus]
          Length = 1046

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 118/241 (48%), Gaps = 26/241 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA------ 115
           L HN L   P       +L  LD+S NR+ HLP + +    L TL   +N LTA      
Sbjct: 138 LSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDHNQLTAFPQQLL 197

Query: 116 ---------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                            LP+D+S L+ LK+  LSG +L   P    ++ +L+ L L NN 
Sbjct: 198 QLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDNNG 257

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P E ++L +L +L+L  N   + P     L  LE L LS NQL S+P+ I+ L  L
Sbjct: 258 LQALPDEFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRL 317

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DNPL
Sbjct: 318 LTLWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDNFGQLSRVGLWKIKDNPL 373

Query: 281 V 281
           +
Sbjct: 374 I 374



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 110/225 (48%), Gaps = 8/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +I+ L L +N L   P+   S   +LR L L  NR   LP A+      L+ L   +N L
Sbjct: 60  DIEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 119

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T     + +S L+ L+  NLS NQL   P Q+  +  L+ L +  N L H+P   + L  
Sbjct: 120 TILGA-EVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNH 178

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L +  N LT  P     L  LE L +S N+L  LP  IS L+ LK L L   +L TL
Sbjct: 179 LRTLDVDHNQLTAFPQQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 238

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P+      C    L+SL+L NN L+ LP E   L+ L  L+L  N
Sbjct: 239 PSGF----CELASLESLMLDNNGLQALPDEFSRLQRLKMLNLSSN 279



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 85/173 (49%), Gaps = 3/173 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L   P++ S    L+ L LS   +  LP        L +L+  NN L A  LP + S 
Sbjct: 210 NRLRGLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLQA--LPDEFSR 267

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ LK+ NLS N  E+FP  +L +  L+ LYL  N L  VP  I  L +L  L L  N +
Sbjct: 268 LQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRLLTLWLDNNRI 327

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
             +PD+  +L  LE L+L  NQ+  LP +   L  +    + +N L   P E+
Sbjct: 328 RYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEV 380



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 10/168 (5%)

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNH--VPREI--NKLCKLH 175
           KD  NLK ++++  +  +  +    +  + TL     G +SL     P+ +    +  + 
Sbjct: 4   KDSGNLKTVRLWRDAALRARKLRSNLRQL-TLSCPGAGGDSLESPDAPQLVLPANIGDIE 62

Query: 176 VLSLGGNSLTDIPDTFGD-LYQLEALILSDNQLESLPASISNLKM-LKSLLLHNNKLRTL 233
           VL+LG N L D+P+  G  L  L  L+L  N+   LP +++ L   L  L + +N+L  L
Sbjct: 63  VLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTIL 122

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             E+++   L E L+ L L +N+L  LP ++  L  L EL +  N L 
Sbjct: 123 GAEVVS--ALRE-LRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLA 167


>gi|149057954|gb|EDM09197.1| malignant fibrous histiocytoma amplified sequence 1 (predicted),
           isoform CRA_b [Rattus norvegicus]
          Length = 1048

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 118/241 (48%), Gaps = 26/241 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA------ 115
           L HN L   P       +L  LD+S NR+ HLP + +    L TL   +N LTA      
Sbjct: 138 LSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDHNQLTAFPQQLL 197

Query: 116 ---------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                            LP+D+S L+ LK+  LSG +L   P    ++ +L+ L L NN 
Sbjct: 198 QLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDNNG 257

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P E ++L +L +L+L  N   + P     L  LE L LS NQL S+P+ I+ L  L
Sbjct: 258 LQALPDEFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRL 317

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DNPL
Sbjct: 318 LTLWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDNFGQLSRVGLWKIKDNPL 373

Query: 281 V 281
           +
Sbjct: 374 I 374



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 110/225 (48%), Gaps = 8/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +I+ L L +N L   P+   S   +LR L L  NR   LP A+      L+ L   +N L
Sbjct: 60  DIEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 119

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T     + +S L+ L+  NLS NQL   P Q+  +  L+ L +  N L H+P   + L  
Sbjct: 120 TILGA-EVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNH 178

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L +  N LT  P     L  LE L +S N+L  LP  IS L+ LK L L   +L TL
Sbjct: 179 LRTLDVDHNQLTAFPQQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 238

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P+      C    L+SL+L NN L+ LP E   L+ L  L+L  N
Sbjct: 239 PSGF----CELASLESLMLDNNGLQALPDEFSRLQRLKMLNLSSN 279



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 85/173 (49%), Gaps = 3/173 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L   P++ S    L+ L LS   +  LP        L +L+  NN L A  LP + S 
Sbjct: 210 NRLRGLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLQA--LPDEFSR 267

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ LK+ NLS N  E+FP  +L +  L+ LYL  N L  VP  I  L +L  L L  N +
Sbjct: 268 LQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRLLTLWLDNNRI 327

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
             +PD+  +L  LE L+L  NQ+  LP +   L  +    + +N L   P E+
Sbjct: 328 RYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEV 380



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 49/168 (29%), Positives = 83/168 (49%), Gaps = 10/168 (5%)

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNH--VPREI--NKLCKLH 175
           KD  NLK ++++  +  +  +    +  + TL     G +SL     P+ +    +  + 
Sbjct: 4   KDSGNLKTVRLWRDAALRARKLRSNLRQL-TLSCPGAGGDSLESPDAPQLVLPANIGDIE 62

Query: 176 VLSLGGNSLTDIPDTFGD-LYQLEALILSDNQLESLPASISNLKM-LKSLLLHNNKLRTL 233
           VL+LG N L D+P+  G  L  L  L+L  N+   LP +++ L   L  L + +N+L  L
Sbjct: 63  VLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTIL 122

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             E+++   L E L+ L L +N+L  LP ++  L  L EL +  N L 
Sbjct: 123 GAEVVS--ALRE-LRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLA 167


>gi|456984207|gb|EMG20322.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Copenhageni str. LT2050]
          Length = 319

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/251 (34%), Positives = 122/251 (48%), Gaps = 22/251 (8%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNN 111
           + P N+  L L   N +  P    +  NL+ LDL +N++   P  I     L +L    N
Sbjct: 45  QNPLNVRVLDLSGQNFTTLPKEIEQLKNLQELDLRDNQLATFPAVIVELQKLESLDLSEN 104

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            L    LP ++  L+NL+   L  N+L  FP +I  +  L+ L+L  N L  +P+EI +L
Sbjct: 105 RLVM--LPNEIGRLQNLQELGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQL 162

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L L  N  T +P   G L  L+ L L DNQL +LP  I  L+ L+ L L NN+L 
Sbjct: 163 KNLQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLT 222

Query: 232 TLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSE 272
            LP EI  L+ L                    + L++L L NN+L  LP EI  L+ L +
Sbjct: 223 VLPKEIGQLQNLQTLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQD 282

Query: 273 LSLRDNPLVIR 283
           L L  NPL ++
Sbjct: 283 LELLMNPLSLK 293



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 37/109 (33%), Positives = 53/109 (48%), Gaps = 4/109 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+     +   +  L LS     +LP  I  LK L+ L L +N+L 
Sbjct: 25  CEIQADEVKPGTYMDLTKALQNPLNVRVLDLSGQNFTTLPKEIEQLKNLQELDLRDNQLA 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           T P  I+ L    +KL+SL L  N+L  LP EI  L+ L EL L  N L
Sbjct: 85  TFPAVIVEL----QKLESLDLSENRLVMLPNEIGRLQNLQELGLYKNKL 129


>gi|148703508|gb|EDL35455.1| mCG19212, isoform CRA_b [Mus musculus]
          Length = 1046

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 118/241 (48%), Gaps = 26/241 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA------ 115
           L HN L   P       +L  LD+S NR+ HLP + +    L TL   +N LTA      
Sbjct: 138 LSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDHNQLTAFPQQLL 197

Query: 116 ---------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                            LP+D+S L+ LK+  LSG +L   P    ++ +L+ L L NN 
Sbjct: 198 QLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPRGFCELASLESLMLDNNG 257

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P E ++L +L +L+L  N   + P     L  LE L LS NQL S+P+ I+ L  L
Sbjct: 258 LQALPDEFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRL 317

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DNPL
Sbjct: 318 LTLWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDNFGQLSRVGLWKIKDNPL 373

Query: 281 V 281
           +
Sbjct: 374 I 374



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 109/225 (48%), Gaps = 8/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +I+ L L +N L   P+   S   +LR L L  NR   LP A+      L+ L   +N L
Sbjct: 60  DIEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 119

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T     + +S L+ L+  NLS NQL   P Q+  +  L+ L +  N L H+P   + L  
Sbjct: 120 TILGA-EVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNH 178

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L +  N LT  P     L  LE L +S N+L  LP  IS L+ LK L L   +L TL
Sbjct: 179 LRTLDVDHNQLTAFPQQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 238

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P       C    L+SL+L NN L+ LP E   L+ L  L+L  N
Sbjct: 239 PRGF----CELASLESLMLDNNGLQALPDEFSRLQRLKMLNLSSN 279



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 86/173 (49%), Gaps = 3/173 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L   P++ S    L+ L LS   +  LP+       L +L+  NN L A  LP + S 
Sbjct: 210 NRLRGLPEDISALRALKILWLSGAELGTLPRGFCELASLESLMLDNNGLQA--LPDEFSR 267

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ LK+ NLS N  E+FP  +L +  L+ LYL  N L  VP  I  L +L  L L  N +
Sbjct: 268 LQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRLLTLWLDNNRI 327

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
             +PD+  +L  LE L+L  NQ+  LP +   L  +    + +N L   P E+
Sbjct: 328 RYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEV 380



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 79/184 (42%), Gaps = 18/184 (9%)

Query: 107 IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ-------FPIQILDIPTLKYLYLGNN 159
           + R+  L A  L  ++  L  L      G+ LE         P  I DI  L    LGNN
Sbjct: 14  LWRDAALRARKLRSNLRQL-TLSCPGAGGDPLESPDAPQLVLPANIGDIEVLN---LGNN 69

Query: 160 SLNHVPREIN-KLCKLHVLSLGGNSLTDIPDTFGDL-YQLEALILSDNQLESLPAS-ISN 216
            L  VP  +   L  L VL L  N    +P    +L + L  L +S N+L  L A  +S 
Sbjct: 70  GLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTILGAEVVSA 129

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           L+ L+ L L +N+L  LP ++  L  L E    L +  N+L  LP     L  L  L + 
Sbjct: 130 LRELRKLNLSHNQLPALPAQLGALAHLEE----LDVSFNRLAHLPDSFSCLNHLRTLDVD 185

Query: 277 DNPL 280
            N L
Sbjct: 186 HNQL 189


>gi|418701720|ref|ZP_13262642.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759284|gb|EKR25499.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 356

 Score =  116 bits (291), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 92/246 (37%), Positives = 122/246 (49%), Gaps = 22/246 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +  +L+ LDL  N++T LP+ I     L TL    N LT
Sbjct: 71  KNLQWLHLNTNQLTILPKEIGQLHDLQWLDLDFNQLTTLPKEIGQLKNLLTLYLGYNQLT 130

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  LPK++  LKNL+  NL  NQ    P +   + +L+ L LG N    +P+EI +L  L
Sbjct: 131 A--LPKEIGQLKNLQWLNLDANQFTTLPKEFEQLQSLQKLTLGYNQFKTLPKEIGQLKNL 188

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N  T +P  F  L  L  L L  NQL +LP  I  LK L +L L+NN+L  LP
Sbjct: 189 QELYLNDNQFTILPKKFEQLKNLHVLNLGYNQLTTLPKEIEQLKNLHTLYLNNNQLTALP 248

Query: 235 TEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            EI  L  L                    + L++L L NN+L  LP EI  LK L EL+L
Sbjct: 249 KEIGQLHDLQWLDLGYNQLTTLPKEIGQLKNLQTLYLGNNQLTALPKEIGQLKNLQELNL 308

Query: 276 RDNPLV 281
            +N L 
Sbjct: 309 WNNQLT 314



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/202 (39%), Positives = 104/202 (51%), Gaps = 7/202 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N  +  P    +  +L+ L L  N+   LP+ I     L  L   +N  T
Sbjct: 140 KNLQWLNLDANQFTTLPKEFEQLQSLQKLTLGYNQFKTLPKEIGQLKNLQELYLNDNQFT 199

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK    LKNL V NL  NQL   P +I  +  L  LYL NN L  +P+EI +L  L
Sbjct: 200 I--LPKKFEQLKNLHVLNLGYNQLTTLPKEIEQLKNLHTLYLNNNQLTALPKEIGQLHDL 257

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L LG N LT +P   G L  L+ L L +NQL +LP  I  LK L+ L L NN+L TLP
Sbjct: 258 QWLDLGYNQLTTLPKEIGQLKNLQTLYLGNNQLTALPKEIGQLKNLQELNLWNNQLTTLP 317

Query: 235 TEIITLKCLSEKLKSLLLHNNK 256
            EI  L    + L++L L NN+
Sbjct: 318 IEIGQL----QNLQTLYLRNNQ 335



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/169 (38%), Positives = 87/169 (51%), Gaps = 4/169 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V  L   +L+  P +I  +  L++L+L  N L  +P+EI +L  
Sbjct: 36  TYRELTKALQNPLDVQVLILREQKLKTVPNEIEQLKNLQWLHLNTNQLTILPKEIGQLHD 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P   G L  L  L L  NQL +LP  I  LK L+ L L  N+  TL
Sbjct: 96  LQWLDLDFNQLTTLPKEIGQLKNLLTLYLGYNQLTALPKEIGQLKNLQWLNLDANQFTTL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P E   L+     L+ L L  N+ +TLP EI  LK L EL L DN   I
Sbjct: 156 PKEFEQLQS----LQKLTLGYNQFKTLPKEIGQLKNLQELYLNDNQFTI 200


>gi|418730631|ref|ZP_13289125.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774840|gb|EKR54844.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 595

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/220 (39%), Positives = 117/220 (53%), Gaps = 5/220 (2%)

Query: 59  DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESL 118
           D  L Y N    FP    KF NLR L L +   + LP+ I+       +A   L   + +
Sbjct: 356 DLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALG-LNGLKKI 414

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P ++  L+NL+  NL  N+LE+ P +I  +  L+ L L  N+L   P EI +L KL  L 
Sbjct: 415 PSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLD 474

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           L  N  T  P   G L  L+ L L  NQL +LPA I  LK L+ L L++N+   LP EI 
Sbjct: 475 LSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIG 534

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            LK    KL++L L NN+L TLPTEI  L+ L  L L++N
Sbjct: 535 KLK----KLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 570



 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 125/249 (50%), Gaps = 24/249 (9%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLL 113
           +N+  L L  N L+  P    +  NL+ LDL +N++   P  I     L +L ++ N L+
Sbjct: 71  KNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLI 130

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L+NL+   L  N+L  FP +I  +  L+ L+L  N L  +P+EI +L  
Sbjct: 131 I---LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKN 187

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N  T +P   G L  L+ L L DNQL +LP  I  L+ L+ L L NN+L  L
Sbjct: 188 LQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVL 247

Query: 234 PTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           P EI  L+ L                    + L++L L NN+L  LP EI  L+ L +L 
Sbjct: 248 PKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLE 307

Query: 275 LRDNPLVIR 283
           L  NPL ++
Sbjct: 308 LLMNPLSLK 316



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 95/282 (33%), Positives = 123/282 (43%), Gaps = 63/282 (22%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN--------------- 100
           +N+  L    N L+  P    +  NL++L+L NNR+T LP+ I                 
Sbjct: 255 QNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLS 314

Query: 101 ----------FPLSTLIARN--------NLLTAESLPKDMSNLKNLKVFNLS---GNQLE 139
                     FP S L  R         NL  A+  P        LKVF+L     N  +
Sbjct: 315 LKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEP--------LKVFDLRLQYKNFSQ 366

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
            FP  IL    L+ LYL +   + +P+EI++L  L  L+LG N L  IP   G L  LEA
Sbjct: 367 LFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEA 426

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS--------------- 244
           L L  N+LE LP  I  L+ L+ L LH N L+  P EI  LK L                
Sbjct: 427 LNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 245 ----EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
               E L++L L  N+L  LP EI  LK L EL L DN   +
Sbjct: 487 IGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTV 528



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 112/223 (50%), Gaps = 15/223 (6%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLL 113
           K  N+  L LY    S  P   S+  NL+ L L  N +  +P  I    L  L A N  L
Sbjct: 374 KFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQ--LRNLEALN--L 429

Query: 114 TA---ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
            A   E LPK++  L+NL+  +L  N L+ FP +I  +  L+ L L  N     P+EI K
Sbjct: 430 EANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGK 489

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L  L+L  N LT++P     L  L+ L L+DNQ   LP  I  LK L++L L NN+L
Sbjct: 490 LENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQL 549

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTE----IITLKC 269
            TLPTEI  L    + L+ L L NN+      E    ++ LKC
Sbjct: 550 TTLPTEIGQL----QNLQWLYLQNNQFSFEEQERIRKLLPLKC 588



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/169 (39%), Positives = 90/169 (53%), Gaps = 4/169 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLSG +L   P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 36  TYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L   P    +L +LE+L LS+N+L  LP  I  L+ L+ L L+ NKL T 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  L    + L+ L L  N+L  LP EI  LK L  L L++N   I
Sbjct: 156 PKEIGQL----QNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTI 200



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 4/111 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+     +   +  L LS  +L +LP  I  LK L+ L L  N L 
Sbjct: 25  CEIQAEEVEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLT 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           TLP EI  L    E L+ L L +N+L T P  I+ L+ L  L L +N L+I
Sbjct: 85  TLPKEIGQL----ENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLII 131


>gi|296198441|ref|XP_002746706.1| PREDICTED: leucine-rich repeat-containing protein 1 [Callithrix
           jacchus]
          Length = 524

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 105/316 (33%), Positives = 157/316 (49%), Gaps = 29/316 (9%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I  LP+++     L  L    N L+ 
Sbjct: 152 NLTSLELRENLLTYLPDSLTQLRRLEELDLGNNEIHSLPESVGALLCLKDLWLDGNQLS- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 211 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+  GD   L  L+L++NQL +LP SI  LK L +L    NKL +LP 
Sbjct: 270 ILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPK 329

Query: 236 EI-----ITLKCLSE--------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           EI     +T+ CL +              +L  L L  N+L  LP  +  LK L  L L 
Sbjct: 330 EIGGCCSLTVFCLRDNRLTRIPAEVSQATELHVLDLAGNRLLHLPLSLTALK-LKALWLS 388

Query: 277 DN---PLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPK 333
           DN   PL+  F +D  Y     +       ++      QE+LP+     LES  + V+ +
Sbjct: 389 DNQSQPLLT-FQTDTDYTTGEKVLTCVLLPQLPSEPTCQENLPR--CGALESLVNDVSDE 445

Query: 334 CKGVFFDNRIEHIKFV 349
                  NR+  I+F+
Sbjct: 446 AWNERAVNRVSAIRFL 461



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 116/224 (51%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN++  
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDI-- 94

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+ +S  K L++ + SGN L + P    ++  L  L + + SL  +P  I  L  L
Sbjct: 95  -PEIPESISFCKALQIADFSGNPLMRLPKSFPELENLTCLSVNDVSLQSLPENIGNLYNL 153

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +PD+   L +LE L L +N++ SLP S+  L  LK L L  N+L  LP
Sbjct: 154 TSLELRENLLTYLPDSLTQLRRLEELDLGNNEIHSLPESVGALLCLKDLWLDGNQLSELP 213

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK     L  L +  N+L  LP EI  L  L++L +  N
Sbjct: 214 QEIGNLK----NLLCLDVSENRLERLPEEISGLTSLTDLVISQN 253



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 122/242 (50%), Gaps = 11/242 (4%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N++   P++ S    L+  D S N +  LP++  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLMRLPKSFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 126 ELENLTCLSVNDV-SLQSLPENIGNLYNLTSLELRENLLTYLPDSLTQLRRLEELDLGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            ++ +P  +  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 185 EIHSLPESVGALLCLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 244

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L  L++  N L T+P  I  LK    KL  L +  N+L  LP  +   + L+EL L +N 
Sbjct: 245 LTDLVISQNLLETIPDGIGKLK----KLSILKVDQNRLTQLPEAVGDCESLTELVLTENQ 300

Query: 280 LV 281
           L+
Sbjct: 301 LL 302



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 61/202 (30%), Positives = 100/202 (49%), Gaps = 8/202 (3%)

Query: 81  LRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           + ++D  +  + ++P+ I  +   L  L+   N L    LP+    L  L+   LS N++
Sbjct: 14  VETIDKRHCSLVYVPEEIYRYARSLEELLLDANQL--RELPEQFFQLVKLRKLGLSDNEI 71

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
           ++ P +I +   L  L +  N +  +P  I+    L +    GN L  +P +F +L  L 
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLMRLPKSFPELENLT 131

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L ++D  L+SLP +I NL  L SL L  N L  LP  +  L+    +L+ L L NN++ 
Sbjct: 132 CLSVNDVSLQSLPENIGNLYNLTSLELRENLLTYLPDSLTQLR----RLEELDLGNNEIH 187

Query: 259 TLPTEIITLKCLSELSLRDNPL 280
           +LP  +  L CL +L L  N L
Sbjct: 188 SLPESVGALLCLKDLWLDGNQL 209


>gi|74152736|dbj|BAE42636.1| unnamed protein product [Mus musculus]
          Length = 976

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 118/241 (48%), Gaps = 26/241 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA------ 115
           L HN L   P       +L  LD+S NR+ HLP + +    L TL   +N LTA      
Sbjct: 66  LSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDHNQLTAFPQQLL 125

Query: 116 ---------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                            LP+D+S L+ LK+  LSG +L   P    ++ +L+ L L NN 
Sbjct: 126 QLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPRGFCELASLESLMLDNNG 185

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P E ++L +L +L+L  N   + P     L  LE L LS NQL S+P+ I+ L  L
Sbjct: 186 LQALPDEFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRL 245

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DNPL
Sbjct: 246 LTLWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDNFGQLSPVGLWKIKDNPL 301

Query: 281 V 281
           +
Sbjct: 302 I 302



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 86/173 (49%), Gaps = 3/173 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L   P++ S    L+ L LS   +  LP+       L +L+  NN L A  LP + S 
Sbjct: 138 NRLRGLPEDISALRALKILWLSGAELGTLPRGFCELASLESLMLDNNGLQA--LPDEFSR 195

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ LK+ NLS N  E+FP  +L +  L+ LYL  N L  VP  I  L +L  L L  N +
Sbjct: 196 LQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRLLTLWLDNNRI 255

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
             +PD+  +L  LE L+L  NQ+  LP +   L  +    + +N L   P E+
Sbjct: 256 RYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSPVGLWKIKDNPLIQPPYEV 308



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/206 (35%), Positives = 99/206 (48%), Gaps = 7/206 (3%)

Query: 75  ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFN 132
            S   +LR L L  NR   LP A+      L+ L   +N LT     + +S L+ ++  N
Sbjct: 7   GSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTILGA-EVVSALREMRKLN 65

Query: 133 LSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFG 192
           LS NQL   P Q+  +  L+ L +  N L H+P   + L  L  L +  N LT  P    
Sbjct: 66  LSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDHNQLTAFPQQLL 125

Query: 193 DLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLL 252
            L  LE L +S N+L  LP  IS L+ LK L L   +L TLP       C    L+SL+L
Sbjct: 126 QLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPRGF----CELASLESLML 181

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDN 278
            NN L+ LP E   L+ L  L+L  N
Sbjct: 182 DNNGLQALPDEFSRLQRLKMLNLSSN 207



 Score = 39.3 bits (90), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 5/98 (5%)

Query: 186 DIPDTFGD-LYQLEALILSDNQLESLPASISNLKM-LKSLLLHNNKLRTLPTEIITLKCL 243
           D+P+  G  L  L  L+L  N+   LP +++ L   L  L + +N+L  L  E+++   L
Sbjct: 1   DVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTILGAEVVS--AL 58

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            E ++ L L +N+L  LP ++  L  L EL +  N L 
Sbjct: 59  RE-MRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLA 95


>gi|418666516|ref|ZP_13227938.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|421125277|ref|ZP_15585530.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421137350|ref|ZP_15597437.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410018564|gb|EKO85402.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410437184|gb|EKP86287.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410757754|gb|EKR19362.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 349

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 89/247 (36%), Positives = 126/247 (51%), Gaps = 30/247 (12%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N+  L L  N +S  P+   +  NL+ LDLS+N++T LP  I N   L  L    N 
Sbjct: 63  KLRNLKELNLGRNQISSLPEEIGELQNLKELDLSDNQLTSLPVEIGNLKNLEILTLYRNR 122

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           ++   LPKD S  +NLK+  LS N+  +FP +IL +  L++L    N L  +P ++ +L 
Sbjct: 123 ISV--LPKDFSLPQNLKILYLSQNKFRKFPDEILQLQNLEWLDFSENQLKELPEKLGQLQ 180

Query: 173 KLHVLSLGGNSLTDIPDTFGD-----------------------LYQLEALILSDNQLES 209
            L++L L GN L  +P +F +                       L +LE L L+ NQ   
Sbjct: 181 NLNILYLLGNELKVLPSSFSEFRSLKSLNLNYNRFQVFPKELISLKKLETLELTGNQFTF 240

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           LP  I NL  L SL L  N+L+ LP  I  L    + L+SL L  N+L TLP EI +L+ 
Sbjct: 241 LPEEIGNLSNLNSLFLEANRLKQLPQNIGKL----QNLESLYLQENQLTTLPEEIGSLQN 296

Query: 270 LSELSLR 276
           L EL L+
Sbjct: 297 LKELYLQ 303



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 119/228 (52%), Gaps = 7/228 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N++ L+    NL  FP   +K  NL+ L+L  N+I+ LP+ I     L  L   +N 
Sbjct: 40  KLQNLERLIFNGKNLKIFPKTITKLRNLKELNLGRNQISSLPEEIGELQNLKELDLSDNQ 99

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  SLP ++ NLKNL++  L  N++   P        LK LYL  N     P EI +L 
Sbjct: 100 LT--SLPVEIGNLKNLEILTLYRNRISVLPKDFSLPQNLKILYLSQNKFRKFPDEILQLQ 157

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L    N L ++P+  G L  L  L L  N+L+ LP+S S  + LKSL L+ N+ + 
Sbjct: 158 NLEWLDFSENQLKELPEKLGQLQNLNILYLLGNELKVLPSSFSEFRSLKSLNLNYNRFQV 217

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            P E+I+LK    KL++L L  N+   LP EI  L  L+ L L  N L
Sbjct: 218 FPKELISLK----KLETLELTGNQFTFLPEEIGNLSNLNSLFLEANRL 261



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 78/143 (54%), Gaps = 4/143 (2%)

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           L+ F  +I+ +  L+ L     +L   P+ I KL  L  L+LG N ++ +P+  G+L  L
Sbjct: 31  LKSFTEEIVKLQNLERLIFNGKNLKIFPKTITKLRNLKELNLGRNQISSLPEEIGELQNL 90

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
           + L LSDNQL SLP  I NLK L+ L L+ N++  LP +      L + LK L L  NK 
Sbjct: 91  KELDLSDNQLTSLPVEIGNLKNLEILTLYRNRISVLPKDF----SLPQNLKILYLSQNKF 146

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
           R  P EI+ L+ L  L   +N L
Sbjct: 147 RKFPDEILQLQNLEWLDFSENQL 169



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 87/167 (52%), Gaps = 4/167 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           +S  +++  L+NL+    +G  L+ FP  I  +  LK L LG N ++ +P EI +L  L 
Sbjct: 32  KSFTEEIVKLQNLERLIFNGKNLKIFPKTITKLRNLKELNLGRNQISSLPEEIGELQNLK 91

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +P   G+L  LE L L  N++  LP   S  + LK L L  NK R  P 
Sbjct: 92  ELDLSDNQLTSLPVEIGNLKNLEILTLYRNRISVLPKDFSLPQNLKILYLSQNKFRKFPD 151

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           EI+ L    + L+ L    N+L+ LP ++  L+ L+ L L  N L +
Sbjct: 152 EILQL----QNLEWLDFSENQLKELPEKLGQLQNLNILYLLGNELKV 194


>gi|417770843|ref|ZP_12418746.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418680944|ref|ZP_13242181.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|400327382|gb|EJO79634.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409947186|gb|EKN97187.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|455665862|gb|EMF31349.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 590

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/220 (39%), Positives = 117/220 (53%), Gaps = 5/220 (2%)

Query: 59  DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESL 118
           D  L Y N    FP    KF NLR L L +   + LP+ I+       +A   L   + +
Sbjct: 351 DLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALG-LNGLKKI 409

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P ++  L+NL+  NL  N+LE+ P +I  +  L+ L L  N+L   P EI +L KL  L 
Sbjct: 410 PSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLD 469

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           L  N  T  P   G L  L+ L L  NQL +LPA I  LK L+ L L++N+   LP EI 
Sbjct: 470 LSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIG 529

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            LK    KL++L L NN+L TLPTEI  L+ L  L L++N
Sbjct: 530 KLK----KLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 565



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 125/249 (50%), Gaps = 24/249 (9%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLL 113
           +N+  L L  N L+  P    +  NL+ LDL +N++   P  I     L +L ++ N L+
Sbjct: 66  KNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLI 125

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L+NL+   L  N+L  FP +I  +  L+ L+L  N L  +P+EI +L  
Sbjct: 126 I---LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKN 182

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N  T +P   G L  L+ L L DNQL +LP  I  L+ L+ L L NN+L  L
Sbjct: 183 LQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVL 242

Query: 234 PTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           P EI  L+ L                    + L++L L NN+L  LP EI  L+ L +L 
Sbjct: 243 PKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLE 302

Query: 275 LRDNPLVIR 283
           L  NPL ++
Sbjct: 303 LLMNPLSLK 311



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 122/274 (44%), Gaps = 47/274 (17%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN--------------- 100
           +N+  L    N L+  P    +  NL++L+L NNR+T LP+ I                 
Sbjct: 250 QNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLS 309

Query: 101 ----------FPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLS---GNQLEQFPIQILD 147
                     FP S L  R           +++  + LKVF+L     N  + FP  IL 
Sbjct: 310 LKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILK 369

Query: 148 IPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQL 207
              L+ LYL +   + +P+EI++L  L  L+LG N L  IP   G L  LEAL L  N+L
Sbjct: 370 FRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANEL 429

Query: 208 ESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLK 248
           E LP  I  L+ L+ L LH N L+  P EI  LK L                    E L+
Sbjct: 430 ERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQ 489

Query: 249 SLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           +L L  N+L  LP EI  LK L EL L DN   +
Sbjct: 490 TLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTV 523



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 112/223 (50%), Gaps = 15/223 (6%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLL 113
           K  N+  L LY    S  P   S+  NL+ L L  N +  +P  I    L  L A N  L
Sbjct: 369 KFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQ--LRNLEALN--L 424

Query: 114 TA---ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
            A   E LPK++  L+NL+  +L  N L+ FP +I  +  L+ L L  N     P+EI K
Sbjct: 425 EANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGK 484

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L  L+L  N LT++P     L  L+ L L+DNQ   LP  I  LK L++L L NN+L
Sbjct: 485 LENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQL 544

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTE----IITLKC 269
            TLPTEI  L    + L+ L L NN+      E    ++ LKC
Sbjct: 545 TTLPTEIGQL----QNLQWLYLQNNQFSFEEQERIRKLLPLKC 583



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/169 (39%), Positives = 90/169 (53%), Gaps = 4/169 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLSG +L   P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 31  TYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 90

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L   P    +L +LE+L LS+N+L  LP  I  L+ L+ L L+ NKL T 
Sbjct: 91  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 150

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  L    + L+ L L  N+L  LP EI  LK L  L L++N   I
Sbjct: 151 PKEIGQL----QNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTI 195



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 4/111 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+     +   +  L LS  +L +LP  I  LK L+ L L  N L 
Sbjct: 20  CEIQAEEVEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLT 79

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           TLP EI  L    E L+ L L +N+L T P  I+ L+ L  L L +N L+I
Sbjct: 80  TLPKEIGQL----ENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLII 126


>gi|124486881|ref|NP_001074748.1| malignant fibrous histiocytoma-amplified sequence 1 homolog [Mus
           musculus]
 gi|160013372|sp|Q3V1N1.2|MFHA1_MOUSE RecName: Full=Malignant fibrous histiocytoma-amplified sequence 1
           homolog
 gi|148703507|gb|EDL35454.1| mCG19212, isoform CRA_a [Mus musculus]
          Length = 1048

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 118/241 (48%), Gaps = 26/241 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA------ 115
           L HN L   P       +L  LD+S NR+ HLP + +    L TL   +N LTA      
Sbjct: 138 LSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDHNQLTAFPQQLL 197

Query: 116 ---------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                            LP+D+S L+ LK+  LSG +L   P    ++ +L+ L L NN 
Sbjct: 198 QLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPRGFCELASLESLMLDNNG 257

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P E ++L +L +L+L  N   + P     L  LE L LS NQL S+P+ I+ L  L
Sbjct: 258 LQALPDEFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRL 317

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DNPL
Sbjct: 318 LTLWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDNFGQLSRVGLWKIKDNPL 373

Query: 281 V 281
           +
Sbjct: 374 I 374



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 109/225 (48%), Gaps = 8/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +I+ L L +N L   P+   S   +LR L L  NR   LP A+      L+ L   +N L
Sbjct: 60  DIEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 119

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T     + +S L+ L+  NLS NQL   P Q+  +  L+ L +  N L H+P   + L  
Sbjct: 120 TILGA-EVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNH 178

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L +  N LT  P     L  LE L +S N+L  LP  IS L+ LK L L   +L TL
Sbjct: 179 LRTLDVDHNQLTAFPQQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 238

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P       C    L+SL+L NN L+ LP E   L+ L  L+L  N
Sbjct: 239 PRGF----CELASLESLMLDNNGLQALPDEFSRLQRLKMLNLSSN 279



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 86/173 (49%), Gaps = 3/173 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L   P++ S    L+ L LS   +  LP+       L +L+  NN L A  LP + S 
Sbjct: 210 NRLRGLPEDISALRALKILWLSGAELGTLPRGFCELASLESLMLDNNGLQA--LPDEFSR 267

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ LK+ NLS N  E+FP  +L +  L+ LYL  N L  VP  I  L +L  L L  N +
Sbjct: 268 LQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRLLTLWLDNNRI 327

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
             +PD+  +L  LE L+L  NQ+  LP +   L  +    + +N L   P E+
Sbjct: 328 RYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEV 380



 Score = 45.8 bits (107), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 58/184 (31%), Positives = 79/184 (42%), Gaps = 18/184 (9%)

Query: 107 IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ-------FPIQILDIPTLKYLYLGNN 159
           + R+  L A  L  ++  L  L      G+ LE         P  I DI  L    LGNN
Sbjct: 14  LWRDAALRARKLRSNLRQL-TLSCPGAGGDPLESPDAPQLVLPANIGDIEVLN---LGNN 69

Query: 160 SLNHVPREIN-KLCKLHVLSLGGNSLTDIPDTFGDL-YQLEALILSDNQLESLPAS-ISN 216
            L  VP  +   L  L VL L  N    +P    +L + L  L +S N+L  L A  +S 
Sbjct: 70  GLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTILGAEVVSA 129

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           L+ L+ L L +N+L  LP ++  L  L E    L +  N+L  LP     L  L  L + 
Sbjct: 130 LRELRKLNLSHNQLPALPAQLGALAHLEE----LDVSFNRLAHLPDSFSCLNHLRTLDVD 185

Query: 277 DNPL 280
            N L
Sbjct: 186 HNQL 189


>gi|74205668|dbj|BAE21119.1| unnamed protein product [Mus musculus]
          Length = 976

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 118/241 (48%), Gaps = 26/241 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA------ 115
           L HN L   P       +L  LD+S NR+ HLP + +    L TL   +N LTA      
Sbjct: 66  LSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDHNQLTAFPQQLL 125

Query: 116 ---------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                            LP+D+S L+ LK+  LSG +L   P    ++ +L+ L L NN 
Sbjct: 126 QLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPRGFCELASLESLMLDNNG 185

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P E ++L +L +L+L  N   + P     L  LE L LS NQL S+P+ I+ L  L
Sbjct: 186 LQALPDEFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRL 245

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DNPL
Sbjct: 246 LTLWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDNFGQLSRVGLWKIKDNPL 301

Query: 281 V 281
           +
Sbjct: 302 I 302



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 86/173 (49%), Gaps = 3/173 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L   P++ S    L+ L LS   +  LP+       L +L+  NN L A  LP + S 
Sbjct: 138 NRLRGLPEDISALRALKILWLSGAELGTLPRGFCELASLESLMLDNNGLQA--LPDEFSR 195

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ LK+ NLS N  E+FP  +L +  L+ LYL  N L  VP  I  L +L  L L  N +
Sbjct: 196 LQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRLLTLWLDNNRI 255

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
             +PD+  +L  LE L+L  NQ+  LP +   L  +    + +N L   P E+
Sbjct: 256 RYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEV 308



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 75/206 (36%), Positives = 99/206 (48%), Gaps = 7/206 (3%)

Query: 75  ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFN 132
            S   +LR L L  NR   LP A+      L+ L   +N LT     + +S L+ L+  N
Sbjct: 7   GSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTILGA-EVVSALRELRKLN 65

Query: 133 LSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFG 192
           LS NQL   P Q+  +  L+ L +  N L H+P   + L  L  L +  N LT  P    
Sbjct: 66  LSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDHNQLTAFPQQLL 125

Query: 193 DLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLL 252
            L  LE L +S N+L  LP  IS L+ LK L L   +L TLP       C    L+SL+L
Sbjct: 126 QLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPRGF----CELASLESLML 181

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDN 278
            NN L+ LP E   L+ L  L+L  N
Sbjct: 182 DNNGLQALPDEFSRLQRLKMLNLSSN 207



 Score = 40.0 bits (92), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 32/98 (32%), Positives = 51/98 (52%), Gaps = 5/98 (5%)

Query: 186 DIPDTFGD-LYQLEALILSDNQLESLPASISNLKM-LKSLLLHNNKLRTLPTEIITLKCL 243
           D+P+  G  L  L  L+L  N+   LP +++ L   L  L + +N+L  L  E+++   L
Sbjct: 1   DVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTILGAEVVS--AL 58

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            E L+ L L +N+L  LP ++  L  L EL +  N L 
Sbjct: 59  RE-LRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLA 95


>gi|421124179|ref|ZP_15584449.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421135047|ref|ZP_15595177.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410020930|gb|EKO87725.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410438666|gb|EKP87752.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 595

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 87/220 (39%), Positives = 117/220 (53%), Gaps = 5/220 (2%)

Query: 59  DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESL 118
           D  L Y N    FP    KF NLR L L +   + LP+ I+       +A   L   + +
Sbjct: 356 DLRLQYKNFSQLFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALG-LNGLKKI 414

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P ++  L+NL+  NL  N+LE+ P +I  +  L+ L L  N+L   P EI +L KL  L 
Sbjct: 415 PSEIGQLRNLEALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLD 474

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           L  N  T  P   G L  L+ L L  NQL +LPA I  LK L+ L L++N+   LP EI 
Sbjct: 475 LSVNQFTTFPKEIGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIG 534

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            LK    KL++L L NN+L TLPTEI  L+ L  L L++N
Sbjct: 535 KLK----KLQTLDLRNNQLTTLPTEIGQLQNLQWLYLQNN 570



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 125/249 (50%), Gaps = 24/249 (9%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLL 113
           +N+  L L  N L+  P    +  NL+ LDL +N++   P  I     L +L ++ N L+
Sbjct: 71  KNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLI 130

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L+NL+   L  N+L  FP +I  +  L+ L+L  N L  +P+EI +L  
Sbjct: 131 I---LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKN 187

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N  T +P   G L  L+ L L DNQL +LP  I  L+ L+ L L NN+L  L
Sbjct: 188 LQTLDLQNNQFTILPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVL 247

Query: 234 PTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           P EI  L+ L                    + L++L L NN+L  LP EI  L+ L +L 
Sbjct: 248 PKEIGQLQNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLE 307

Query: 275 LRDNPLVIR 283
           L  NPL ++
Sbjct: 308 LLMNPLSLK 316



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 91/274 (33%), Positives = 122/274 (44%), Gaps = 47/274 (17%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN--------------- 100
           +N+  L    N L+  P    +  NL++L+L NNR+T LP+ I                 
Sbjct: 255 QNLQMLCSPENRLTALPKEMGQLKNLQTLNLVNNRLTVLPKEIGQLQNLQDLELLMNPLS 314

Query: 101 ----------FPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLS---GNQLEQFPIQILD 147
                     FP S L  R           +++  + LKVF+L     N  + FP  IL 
Sbjct: 315 LKERKRIQKLFPDSNLDLREVAEDGVYRNLNLAQEEPLKVFDLRLQYKNFSQLFPKVILK 374

Query: 148 IPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQL 207
              L+ LYL +   + +P+EI++L  L  L+LG N L  IP   G L  LEAL L  N+L
Sbjct: 375 FRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANEL 434

Query: 208 ESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLK 248
           E LP  I  L+ L+ L LH N L+  P EI  LK L                    E L+
Sbjct: 435 ERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLENLQ 494

Query: 249 SLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           +L L  N+L  LP EI  LK L EL L DN   +
Sbjct: 495 TLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTV 528



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/223 (37%), Positives = 112/223 (50%), Gaps = 15/223 (6%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLL 113
           K  N+  L LY    S  P   S+  NL+ L L  N +  +P  I    L  L A N  L
Sbjct: 374 KFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKKIPSEIGQ--LRNLEALN--L 429

Query: 114 TA---ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
            A   E LPK++  L+NL+  +L  N L+ FP +I  +  L+ L L  N     P+EI K
Sbjct: 430 EANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGK 489

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L  L+L  N LT++P     L  L+ L L+DNQ   LP  I  LK L++L L NN+L
Sbjct: 490 LENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQL 549

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTE----IITLKC 269
            TLPTEI  L    + L+ L L NN+      E    ++ LKC
Sbjct: 550 TTLPTEIGQL----QNLQWLYLQNNQFSFEEQERIRKLLPLKC 588



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/169 (39%), Positives = 90/169 (53%), Gaps = 4/169 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLSG +L   P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 36  TYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L   P    +L +LE+L LS+N+L  LP  I  L+ L+ L L+ NKL T 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  L    + L+ L L  N+L  LP EI  LK L  L L++N   I
Sbjct: 156 PKEIGQL----QNLQKLWLSENRLTALPKEIGQLKNLQTLDLQNNQFTI 200



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 4/111 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+     +   +  L LS  +L +LP  I  LK L+ L L  N L 
Sbjct: 25  CEIQAEEVEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLT 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           TLP EI  L    E L+ L L +N+L T P  I+ L+ L  L L +N L+I
Sbjct: 85  TLPKEIGQL----ENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLII 131


>gi|359728061|ref|ZP_09266757.1| hypothetical protein Lwei2_14527 [Leptospira weilii str.
           2006001855]
          Length = 289

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 95/254 (37%), Positives = 131/254 (51%), Gaps = 10/254 (3%)

Query: 29  FSYSSLDSETLATQIELLPNNDYNKKPEN---IDTLLLYHNNLSFFPDNASKFTNLRSLD 85
           F  +   +E  A ++E     D  K  +N   +  L L    LS  P    +  NL++L+
Sbjct: 18  FILACFFAELQAEEVEQGTYTDLTKALQNPLKVRVLNLSFQKLSTLPKEIGELQNLQTLN 77

Query: 86  LSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQ 144
           L +N +T LP+ +     L  L  R N LT  +LPK++  LK+L+   L  NQL   P +
Sbjct: 78  LDSNELTALPKEMRQLQKLQKLDLRENQLT--TLPKEIGQLKSLQTLYLLANQLTVLPNE 135

Query: 145 ILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD 204
           I  +  L+ LYL  N L  +P+EI KL  L  L+L GN LT +P   G L  L+ L L  
Sbjct: 136 IGQLQNLQTLYLSQNQLTILPKEIAKLQNLQTLNLNGNQLTTLPSEIGQLQNLQRLDLFH 195

Query: 205 NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           N+L  LP  I  L+ L+ L L +N+L  LP EI  L+ L E    L L+ N+L TLP+EI
Sbjct: 196 NKLTVLPKEILQLQNLQRLDLSHNQLTILPKEIAKLQNLQE----LNLNGNRLTTLPSEI 251

Query: 265 ITLKCLSELSLRDN 278
             LK L  L L  N
Sbjct: 252 EFLKKLKILRLYQN 265



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 77/208 (37%), Positives = 113/208 (54%), Gaps = 5/208 (2%)

Query: 75  ASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLS 134
           A  F  L++ ++     T L +A+ N PL   +   +     +LPK++  L+NL+  NL 
Sbjct: 21  ACFFAELQAEEVEQGTYTDLTKALQN-PLKVRVLNLSFQKLSTLPKEIGELQNLQTLNLD 79

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
            N+L   P ++  +  L+ L L  N L  +P+EI +L  L  L L  N LT +P+  G L
Sbjct: 80  SNELTALPKEMRQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLLANQLTVLPNEIGQL 139

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
             L+ L LS NQL  LP  I+ L+ L++L L+ N+L TLP+EI  L    + L+ L L +
Sbjct: 140 QNLQTLYLSQNQLTILPKEIAKLQNLQTLNLNGNQLTTLPSEIGQL----QNLQRLDLFH 195

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPLVI 282
           NKL  LP EI+ L+ L  L L  N L I
Sbjct: 196 NKLTVLPKEILQLQNLQRLDLSHNQLTI 223



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 81/202 (40%), Positives = 113/202 (55%), Gaps = 7/202 (3%)

Query: 81  LRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
           +R L+LS  +++ LP+ I     L TL   +N LTA  LPK+M  L+ L+  +L  NQL 
Sbjct: 50  VRVLNLSFQKLSTLPKEIGELQNLQTLNLDSNELTA--LPKEMRQLQKLQKLDLRENQLT 107

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
             P +I  + +L+ LYL  N L  +P EI +L  L  L L  N LT +P     L  L+ 
Sbjct: 108 TLPKEIGQLKSLQTLYLLANQLTVLPNEIGQLQNLQTLYLSQNQLTILPKEIAKLQNLQT 167

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRT 259
           L L+ NQL +LP+ I  L+ L+ L L +NKL  LP EI+ L    + L+ L L +N+L  
Sbjct: 168 LNLNGNQLTTLPSEIGQLQNLQRLDLFHNKLTVLPKEILQL----QNLQRLDLSHNQLTI 223

Query: 260 LPTEIITLKCLSELSLRDNPLV 281
           LP EI  L+ L EL+L  N L 
Sbjct: 224 LPKEIAKLQNLQELNLNGNRLT 245



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 100/187 (53%), Gaps = 3/187 (1%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           ++ + +  L L  N L+  P    +  +L++L L  N++T LP  I     L TL    N
Sbjct: 91  RQLQKLQKLDLRENQLTTLPKEIGQLKSLQTLYLLANQLTVLPNEIGQLQNLQTLYLSQN 150

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT   LPK+++ L+NL+  NL+GNQL   P +I  +  L+ L L +N L  +P+EI +L
Sbjct: 151 QLTI--LPKEIAKLQNLQTLNLNGNQLTTLPSEIGQLQNLQRLDLFHNKLTVLPKEILQL 208

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L L  N LT +P     L  L+ L L+ N+L +LP+ I  LK LK L L+ N+  
Sbjct: 209 QNLQRLDLSHNQLTILPKEIAKLQNLQELNLNGNRLTTLPSEIEFLKKLKILRLYQNEFS 268

Query: 232 TLPTEII 238
           +   E I
Sbjct: 269 SEEKERI 275


>gi|421099998|ref|ZP_15560640.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796979|gb|EKR99096.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 310

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/222 (38%), Positives = 125/222 (56%), Gaps = 7/222 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L L +N L+  P +  K  NL+ L L  N++T LP+ I     L  L   +N L
Sbjct: 41  PTDVLILDLTNNQLTTLPKDIGKLQNLQKLYLDGNQLTTLPEDIGYLKELQVLHLYDNQL 100

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
             ++LPK++  L+NL+V  LS N+L   P  I  +  L+ L+L +N L  +P++I KL K
Sbjct: 101 --KTLPKEIGQLQNLRVLGLSHNKLTSLPKDIGQLQKLQRLHLDDNQLRTLPKDIGKLQK 158

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P   G L +L+ L L DNQL +LP  I  L+ L+ L L +N+L TL
Sbjct: 159 LRELLLYNNQLTMLPKDIGQLQKLQRLHLGDNQLRTLPKDIGKLQNLRVLKLDSNQLATL 218

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
           P +I  L    + L+ L L  N+L TLP +I  L+ L +L L
Sbjct: 219 PKDIGKL----QNLQVLDLGGNQLATLPKDIGKLQNLQKLHL 256



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/172 (44%), Positives = 102/172 (59%), Gaps = 6/172 (3%)

Query: 110 NNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREIN 169
           NN LT  +LPKD+  L+NL+   L GNQL   P  I  +  L+ L+L +N L  +P+EI 
Sbjct: 51  NNQLT--TLPKDIGKLQNLQKLYLDGNQLTTLPEDIGYLKELQVLHLYDNQLKTLPKEIG 108

Query: 170 KLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           +L  L VL L  N LT +P   G L +L+ L L DNQL +LP  I  L+ L+ LLL+NN+
Sbjct: 109 QLQNLRVLGLSHNKLTSLPKDIGQLQKLQRLHLDDNQLRTLPKDIGKLQKLRELLLYNNQ 168

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L  LP +I  L    +KL+ L L +N+LRTLP +I  L+ L  L L  N L 
Sbjct: 169 LTMLPKDIGQL----QKLQRLHLGDNQLRTLPKDIGKLQNLRVLKLDSNQLA 216



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/204 (39%), Positives = 116/204 (56%), Gaps = 7/204 (3%)

Query: 79  TNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           T++  LDL+NN++T LP+ I     L  L    N LT  +LP+D+  LK L+V +L  NQ
Sbjct: 42  TDVLILDLTNNQLTTLPKDIGKLQNLQKLYLDGNQLT--TLPEDIGYLKELQVLHLYDNQ 99

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           L+  P +I  +  L+ L L +N L  +P++I +L KL  L L  N L  +P   G L +L
Sbjct: 100 LKTLPKEIGQLQNLRVLGLSHNKLTSLPKDIGQLQKLQRLHLDDNQLRTLPKDIGKLQKL 159

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
             L+L +NQL  LP  I  L+ L+ L L +N+LRTLP +I  L    + L+ L L +N+L
Sbjct: 160 RELLLYNNQLTMLPKDIGQLQKLQRLHLGDNQLRTLPKDIGKL----QNLRVLKLDSNQL 215

Query: 258 RTLPTEIITLKCLSELSLRDNPLV 281
            TLP +I  L+ L  L L  N L 
Sbjct: 216 ATLPKDIGKLQNLQVLDLGGNQLA 239



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/207 (37%), Positives = 104/207 (50%), Gaps = 9/207 (4%)

Query: 46  LPNNDYNKKPENI------DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L  N     PE+I        L LY N L   P    +  NLR L LS+N++T LP+ I 
Sbjct: 72  LDGNQLTTLPEDIGYLKELQVLHLYDNQLKTLPKEIGQLQNLRVLGLSHNKLTSLPKDIG 131

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L  L   +N L   +LPKD+  L+ L+   L  NQL   P  I  +  L+ L+LG+
Sbjct: 132 QLQKLQRLHLDDNQL--RTLPKDIGKLQKLRELLLYNNQLTMLPKDIGQLQKLQRLHLGD 189

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P++I KL  L VL L  N L  +P   G L  L+ L L  NQL +LP  I  L+
Sbjct: 190 NQLRTLPKDIGKLQNLRVLKLDSNQLATLPKDIGKLQNLQVLDLGGNQLATLPKDIGKLQ 249

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSE 245
            L+ L L+  +  T+P EI  L+ L E
Sbjct: 250 NLQKLHLNGYEFTTIPKEIGQLQKLQE 276



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/171 (35%), Positives = 90/171 (52%), Gaps = 3/171 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N+  L L HN L+  P +  +   L+ L L +N++  LP+ I     L  L+  NN LT
Sbjct: 111 QNLRVLGLSHNKLTSLPKDIGQLQKLQRLHLDDNQLRTLPKDIGKLQKLRELLLYNNQLT 170

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPKD+  L+ L+  +L  NQL   P  I  +  L+ L L +N L  +P++I KL  L
Sbjct: 171 M--LPKDIGQLQKLQRLHLGDNQLRTLPKDIGKLQNLRVLKLDSNQLATLPKDIGKLQNL 228

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
            VL LGGN L  +P   G L  L+ L L+  +  ++P  I  L+ L+ L L
Sbjct: 229 QVLDLGGNQLATLPKDIGKLQNLQKLHLNGYEFTTIPKEIGQLQKLQELYL 279



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 58/129 (44%), Positives = 80/129 (62%), Gaps = 4/129 (3%)

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           L L NN L  +P++I KL  L  L L GN LT +P+  G L +L+ L L DNQL++LP  
Sbjct: 47  LDLTNNQLTTLPKDIGKLQNLQKLYLDGNQLTTLPEDIGYLKELQVLHLYDNQLKTLPKE 106

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           I  L+ L+ L L +NKL +LP +I  L    +KL+ L L +N+LRTLP +I  L+ L EL
Sbjct: 107 IGQLQNLRVLGLSHNKLTSLPKDIGQL----QKLQRLHLDDNQLRTLPKDIGKLQKLREL 162

Query: 274 SLRDNPLVI 282
            L +N L +
Sbjct: 163 LLYNNQLTM 171


>gi|426358776|ref|XP_004046670.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Gorilla gorilla gorilla]
          Length = 1035

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 118/241 (48%), Gaps = 26/241 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA------ 115
           L HN L   P       +L  LD+S NR+ HLP +++    L TL   +N LTA      
Sbjct: 125 LSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLL 184

Query: 116 ---------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                            LP+D+S L+ LK+  LSG +L   P    ++ +L+ L L NN 
Sbjct: 185 QLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNG 244

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P + + L +L +L+L  N   + P     L  LE L LS NQL S+P+ IS L  L
Sbjct: 245 LQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRL 304

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DNPL
Sbjct: 305 LTLWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDHFGQLSRVGLWKIKDNPL 360

Query: 281 V 281
           +
Sbjct: 361 I 361



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 112/225 (49%), Gaps = 8/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +I+ L L +N L   P+   S   +LR L L  NR   LP A+      L+ L   +N L
Sbjct: 47  DIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 106

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA    + +S L+ L+  NLS NQL   P Q+  +  L+ L +  N L H+P  ++ L +
Sbjct: 107 TALGA-EVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSR 165

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L +  N LT  P     L  LE L +S N+L  LP  IS L+ LK L L   +L TL
Sbjct: 166 LRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 225

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P       C    L+SL+L NN L+ LP +   L+ L  L+L  N
Sbjct: 226 PAGF----CELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSN 266



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 84/173 (48%), Gaps = 3/173 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L   P++ S    L+ L LS   +  LP        L +L+  NN L A  LP   S 
Sbjct: 197 NRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQA--LPAQFSC 254

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ LK+ NLS N  E+FP  +L +  L+ LYL  N L  VP  I+ L +L  L L  N +
Sbjct: 255 LQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRI 314

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
             +PD+  +L  LE L+L  NQ+  LP     L  +    + +N L   P E+
Sbjct: 315 RYLPDSIVELTGLEELVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLIQPPYEV 367



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 74/142 (52%), Gaps = 7/142 (4%)

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILD-IPTLKYLYLGNNSLNHVPREINKLC-KLHVLSLG 180
           +NL +++  NL  N LE+ P  +   + +L+ L L  N    +P  + +L   L  L + 
Sbjct: 43  ANLGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVS 102

Query: 181 GNSLTDI-PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
            N LT +  +    L +L  L LS NQL +LPA +  L  L+ L +  N+L  LP    +
Sbjct: 103 HNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPD---S 159

Query: 240 LKCLSEKLKSLLLHNNKLRTLP 261
           L CLS +L++L + +N+L   P
Sbjct: 160 LSCLS-RLRTLDVDHNQLTAFP 180



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 37/113 (32%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 171 LCKLHVLSLGGNSLTDIPDTFGD-LYQLEALILSDNQLESLPASISNLKM-LKSLLLHNN 228
           L  +  L+LG N L ++P+  G  L  L  L+L  N+   LP +++ L   L  L + +N
Sbjct: 45  LGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHN 104

Query: 229 KLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +L  L  E+++   L E L+ L L +N+L  LP ++  L  L EL +  N L 
Sbjct: 105 RLTALGAEVVS--ALRE-LRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLA 154


>gi|24216023|ref|NP_713504.1| hypothetical protein LA_3324 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075104|ref|YP_005989423.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24197251|gb|AAN50522.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458895|gb|AER03440.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 329

 Score =  116 bits (290), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 99/272 (36%), Positives = 125/272 (45%), Gaps = 45/272 (16%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN-NLL 113
           P ++  L L    L+  P    +  NL+ L+L NN+IT LP+ I       L+    N L
Sbjct: 43  PLDVRILNLSEQKLTTLPKEIGQLKNLQELNLGNNQITILPKEIGQLQNLQLLGLYYNQL 102

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++  LKNL+   L  NQ+   P +I  +  LK L+L NN L  +P+EI +L  
Sbjct: 103 TI--LPKEIEQLKNLQALYLGNNQITILPKEIRQLQNLKVLFLSNNQLTTLPKEIEQLKN 160

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L LG N LT  P     L  L+ L L DNQL  LP  I  LK L+ L L  N+L+TL
Sbjct: 161 LQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVLPQEIKQLKNLQLLDLSYNQLKTL 220

Query: 234 PTEIITLKCLSE------------------------------------------KLKSLL 251
           P EI  LK L E                                           LK L 
Sbjct: 221 PKEIEQLKNLQELNLGYNQLTVLPKEIEQLKNLQTLYLGYNQLTTLPKEIGQLQNLKVLF 280

Query: 252 LHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
           L+NN+L TLP EI  LK L EL L +N L I 
Sbjct: 281 LNNNQLTTLPKEIGQLKNLQELYLNNNQLSIE 312



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/191 (39%), Positives = 102/191 (53%), Gaps = 4/191 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  ++++ NLS  +L   P +I  +  L+ L LGNN +  +P+EI +L  
Sbjct: 32  TYWDLTKALQNPLDVRILNLSEQKLTTLPKEIGQLKNLQELNLGNNQITILPKEIGQLQN 91

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P     L  L+AL L +NQ+  LP  I  L+ LK L L NN+L TL
Sbjct: 92  LQLLGLYYNQLTILPKEIEQLKNLQALYLGNNQITILPKEIRQLQNLKVLFLSNNQLTTL 151

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPP 293
           P EI  LK     L++L L NN+L T P EI  LK L  L L DN L +        K  
Sbjct: 152 PKEIEQLK----NLQTLYLGNNRLTTFPKEIEQLKNLQLLYLYDNQLTVLPQEIKQLKNL 207

Query: 294 SLLELASRTLK 304
            LL+L+   LK
Sbjct: 208 QLLDLSYNQLK 218



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 53/102 (51%), Gaps = 11/102 (10%)

Query: 188 PDTFGDLYQ-------LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           P T+ DL +       +  L LS+ +L +LP  I  LK L+ L L NN++  LP EI  L
Sbjct: 30  PGTYWDLTKALQNPLDVRILNLSEQKLTTLPKEIGQLKNLQELNLGNNQITILPKEIGQL 89

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           + L      L L+ N+L  LP EI  LK L  L L +N + I
Sbjct: 90  QNLQ----LLGLYYNQLTILPKEIEQLKNLQALYLGNNQITI 127


>gi|417765447|ref|ZP_12413409.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400352384|gb|EJP04580.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 426

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/226 (40%), Positives = 131/226 (57%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+++L L HN L+  P    +  NL SL L +N++  LP+ I     L  L  RNN LT
Sbjct: 187 QNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLT 246

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+   L+ N+L   P +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 247 --TLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNL 304

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L GN LT +P+  G L +L+ L L +NQL  LP  +  L+ L+SL L +N+L  LP
Sbjct: 305 QELDLDGNQLTTLPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALP 364

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L    +KL++L L  N+L TLP EI  LK L +L L +NPL
Sbjct: 365 KEIGKL----QKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPL 406



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 115/231 (49%), Gaps = 22/231 (9%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLK 129
            P    K  NL+ L LS N++  LP+ I     L  L    N LTA  +PK++  L+NL+
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTA--IPKEIGQLQNLQ 144

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
             NL+ NQL   P  I  +  L+ LYLG+N  N + +EI +L  L  L L  N L  +P 
Sbjct: 145 ELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPK 204

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS----- 244
             G L  LE+L L  NQL  LP  I  L+ L+ L L NN+L TLP EI  L+ L      
Sbjct: 205 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 245 --------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                         + L+ L L+ N+L TLP EI  L+ L EL L  N L 
Sbjct: 265 KNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLT 315



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 108/219 (49%), Gaps = 35/219 (15%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-------------- 102
           N+++L L HN L+  P    +  NL+ L L NN++T LP+ I                  
Sbjct: 211 NLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTT 270

Query: 103 ----------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                     L  L    N LT  +LPK++  L+NL+  +L GNQL   P  I  +  L+
Sbjct: 271 LPEEIGQLQNLQKLKLYENQLT--TLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQ 328

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYLGNN LN +P ++ +L  L  L L  N L  +P   G L +L+ L L  NQL +LP 
Sbjct: 329 TLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPE 388

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLL 251
            I  LK LK L LHNN    LP+E I      E+++ LL
Sbjct: 389 EIKQLKNLKKLYLHNN---PLPSEKI------ERIRKLL 418



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 105/217 (48%), Gaps = 31/217 (14%)

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMS 123
           Y+ N++    N     N+R L+LS +++T LP  I       L+  ++     +LPK++ 
Sbjct: 37  YYRNITEVLKNPQ---NVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLI-ALPKEIG 92

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            L+NL+  +LS NQL                         +P EI +L  L  L L  N 
Sbjct: 93  KLQNLQQLHLSKNQLM-----------------------ALPEEIGQLQNLQKLKLYENQ 129

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT IP   G L  L+ L L+ NQL +LP  I  L+ L++L L +N+  ++  EI  L   
Sbjct: 130 LTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQL--- 186

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            + L+SL L +N+L  LP EI  L+ L  L L  N L
Sbjct: 187 -QNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQL 222


>gi|24215664|ref|NP_713145.1| hypothetical protein LA_2964 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074856|ref|YP_005989174.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196829|gb|AAN50163.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458646|gb|AER03191.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 426

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/226 (40%), Positives = 131/226 (57%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+++L L HN L+  P    +  NL SL L +N++  LP+ I     L  L  RNN LT
Sbjct: 187 QNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLT 246

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+   L+ N+L   P +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 247 --TLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNL 304

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L GN LT +P+  G L +L+ L L +NQL  LP  +  L+ L+SL L +N+L  LP
Sbjct: 305 QELDLDGNQLTTLPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALP 364

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L    +KL++L L  N+L TLP EI  LK L +L L +NPL
Sbjct: 365 KEIGKL----QKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPL 406



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 115/231 (49%), Gaps = 22/231 (9%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLK 129
            P    K  NL+ L LS N++  LP+ I     L  L    N LTA  +PK++  L+NL+
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTA--IPKEIGQLQNLQ 144

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
             NL+ NQL   P  I  +  L+ LYLG+N  N + +EI +L  L  L L  N L  +P 
Sbjct: 145 ELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPK 204

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS----- 244
             G L  LE+L L  NQL  LP  I  L+ L+ L L NN+L TLP EI  L+ L      
Sbjct: 205 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 245 --------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                         + L+ L L+ N+L TLP EI  L+ L EL L  N L 
Sbjct: 265 KNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLT 315



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 108/219 (49%), Gaps = 35/219 (15%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-------------- 102
           N+++L L HN L+  P    +  NL+ L L NN++T LP+ I                  
Sbjct: 211 NLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTT 270

Query: 103 ----------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                     L  L    N LT  +LPK++  L+NL+  +L GNQL   P  I  +  L+
Sbjct: 271 LPKEIGQLQNLQKLKLYENQLT--TLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQ 328

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYLGNN LN +P ++ +L  L  L L  N L  +P   G L +L+ L L  NQL +LP 
Sbjct: 329 TLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPE 388

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLL 251
            I  LK LK L LHNN    LP+E I      E+++ LL
Sbjct: 389 EIKQLKNLKKLYLHNN---PLPSEKI------ERIRKLL 418



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 91/182 (50%), Gaps = 27/182 (14%)

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQI----------------LDIP-------TLKYLYLGN 158
           + N +N+++ NLSG++L   P +I                + +P        L+ L+L  
Sbjct: 45  LKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSK 104

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P EI +L  L  L L  N LT IP   G L  L+ L L+ NQL +LP  I  L+
Sbjct: 105 NQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQ 164

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L++L L +N+  ++  EI  L    + L+SL L +N+L  LP EI  L+ L  L L  N
Sbjct: 165 RLQTLYLGHNQFNSILKEIGQL----QNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHN 220

Query: 279 PL 280
            L
Sbjct: 221 QL 222


>gi|417785509|ref|ZP_12433213.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409951374|gb|EKO05889.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 426

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 92/226 (40%), Positives = 131/226 (57%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+++L L HN L+  P    +  NL SL L +N++  LP+ I     L  L  RNN LT
Sbjct: 187 QNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLT 246

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+   L+ N+L   P +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 247 --TLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNL 304

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L GN LT +P+  G L +L+ L L +NQL  LP  +  L+ L+SL L +N+L  LP
Sbjct: 305 QELDLDGNQLTTLPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALP 364

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L    +KL++L L  N+L TLP EI  LK L +L L +NPL
Sbjct: 365 KEIGKL----QKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPL 406



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 115/231 (49%), Gaps = 22/231 (9%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLK 129
            P    K  NL+ L LS N++  LP+ I     L  L    N LTA  +PK++  L+NL+
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTA--IPKEIGKLQNLQ 144

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
             NL+ NQL   P  I  +  L+ LYLG+N  N + +EI +L  L  L L  N L  +P 
Sbjct: 145 ELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPK 204

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS----- 244
             G L  LE+L L  NQL  LP  I  L+ L+ L L NN+L TLP EI  L+ L      
Sbjct: 205 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 245 --------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                         + L+ L L+ N+L TLP EI  L+ L EL L  N L 
Sbjct: 265 KNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLT 315



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 108/219 (49%), Gaps = 35/219 (15%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-------------- 102
           N+++L L HN L+  P    +  NL+ L L NN++T LP+ I                  
Sbjct: 211 NLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTT 270

Query: 103 ----------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                     L  L    N LT  +LPK++  L+NL+  +L GNQL   P  I  +  L+
Sbjct: 271 LPEEIGQLQNLQKLKLYENQLT--TLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQ 328

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYLGNN LN +P ++ +L  L  L L  N L  +P   G L +L+ L L  NQL +LP 
Sbjct: 329 TLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPE 388

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLL 251
            I  LK LK L LHNN    LP+E I      E+++ LL
Sbjct: 389 EIKQLKNLKKLYLHNN---PLPSEKI------ERIRKLL 418



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 105/217 (48%), Gaps = 31/217 (14%)

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMS 123
           Y+ N++    N     N+R L+LS +++T LP  I       L+  ++     +LPK++ 
Sbjct: 37  YYRNITEVLKNPQ---NVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLI-ALPKEIG 92

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            L+NL+  +LS NQL                         +P EI +L  L  L L  N 
Sbjct: 93  KLQNLQQLHLSKNQLM-----------------------ALPEEIGQLQNLQKLKLYENQ 129

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT IP   G L  L+ L L+ NQL +LP  I  L+ L++L L +N+  ++  EI  L   
Sbjct: 130 LTAIPKEIGKLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQL--- 186

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            + L+SL L +N+L  LP EI  L+ L  L L  N L
Sbjct: 187 -QNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQL 222


>gi|359321003|ref|XP_003639483.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 1 [Canis lupus familiaris]
          Length = 524

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 80/209 (38%), Positives = 117/209 (55%), Gaps = 7/209 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 211 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKKLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+  GD   L  L+L++NQL +LP SI  LK L +L    NKL +LP 
Sbjct: 270 ILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPK 329

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           EI    C S  L    + +N+L  LP E+
Sbjct: 330 EIG--GCCS--LTVFCVRDNRLTRLPAEV 354



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 115/223 (51%), Gaps = 9/223 (4%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTA 115
           ++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN++   
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDI--- 94

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+ +S  K L++ + SGN L + P    ++  L  L + + SL  +P  I  L  L 
Sbjct: 95  PEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLA 154

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +PD+   L +LE L L +N++ +LP SI  L  LK L L  N+L  LP 
Sbjct: 155 SLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQ 214

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           EI  LK     L  L +  N+L  LP EI  L  L++L +  N
Sbjct: 215 EIGNLK----NLLCLDVSENRLERLPEEISGLTSLTDLVISQN 253



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 125/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N++   P++ S    L+  D S N +T LP++  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 126 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 185 EIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 244

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTL 260
           L  L++  N L  +P  I  LK LS                   E L  L+L  N+L TL
Sbjct: 245 LTDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTL 304

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK LS L+   N LV
Sbjct: 305 PKSIGKLKKLSNLNADRNKLV 325



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/224 (34%), Positives = 106/224 (47%), Gaps = 14/224 (6%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN+    PE+I  LL      L  N LS  P       NL  LD+S NR+  LP+ I+
Sbjct: 181 LGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS 240

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L+ L+   NLL  E +P  +  LK L +  +  N+L Q P  + D  +L  L L  
Sbjct: 241 GLTSLTDLVISQNLL--EMIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTE 298

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P+ I KL KL  L+   N L  +P   G    L    + DN+L  LPA +S   
Sbjct: 299 NQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRLPAEVSQAT 358

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
            L  L +  N+L  LP  +  L     KLK+L L +N+ + L T
Sbjct: 359 ELHVLDVAGNRLLHLPLSLTAL-----KLKALWLSDNQSQPLLT 397



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/164 (33%), Positives = 83/164 (50%), Gaps = 4/164 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            LP+    L  L+   LS N++++ P +I +   L  L +  N +  +P  I+    L +
Sbjct: 50  ELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQI 109

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
               GN LT +P++F +L  L  L ++D  L+SLP +I NL  L SL L  N L  LP  
Sbjct: 110 ADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDS 169

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +  L+    +L+ L L NN++  LP  I  L  L +L L  N L
Sbjct: 170 LTQLR----RLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQL 209


>gi|429962151|gb|ELA41695.1| hypothetical protein VICG_01328 [Vittaforma corneae ATCC 50505]
          Length = 318

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 90/235 (38%), Positives = 120/235 (51%), Gaps = 7/235 (2%)

Query: 47  PNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LST 105
           P   + +  E+   + + +  ++    N  +   L  LDLSNNR+  LP  I     L  
Sbjct: 32  PPYGFERYSEDETEVSIQYQGITSIGSNIKRLAKLEKLDLSNNRLKSLPDEIGELKNLQH 91

Query: 106 LIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
           L    N    ESLP  +  LKNL+  +LS N+L   P  I  +  L+ LYL NN L  +P
Sbjct: 92  LDLSYN--EFESLPAVIWELKNLRYLDLSNNKLGILPTVIRKLKNLEILYLSNNKLELLP 149

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
            EI +L KL  L LGGN LT +P   G L  L+ L L+ N+LE LP+ I  L+ L+ L +
Sbjct: 150 AEIVELEKLQYLYLGGNRLTLLPVGIGGLKNLQWLHLNYNKLEILPSEIRRLEKLQYLYI 209

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             N+L  LP E+  L  L E    L L+ N+L TLP EI  LK L  L L  N L
Sbjct: 210 RGNRLTLLPIEVGQLGSLQE----LGLNGNELETLPVEIGKLKNLRTLHLGYNKL 260



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 75/187 (40%), Positives = 102/187 (54%), Gaps = 3/187 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L +N     P    +  NLR LDLSNN++  LP  I     L  L   NN L 
Sbjct: 87  KNLQHLDLSYNEFESLPAVIWELKNLRYLDLSNNKLGILPTVIRKLKNLEILYLSNNKL- 145

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            E LP ++  L+ L+   L GN+L   P+ I  +  L++L+L  N L  +P EI +L KL
Sbjct: 146 -ELLPAEIVELEKLQYLYLGGNRLTLLPVGIGGLKNLQWLHLNYNKLEILPSEIRRLEKL 204

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L + GN LT +P   G L  L+ L L+ N+LE+LP  I  LK L++L L  NKL TLP
Sbjct: 205 QYLYIRGNRLTLLPIEVGQLGSLQELGLNGNELETLPVEIGKLKNLRTLHLGYNKLETLP 264

Query: 235 TEIITLK 241
            EI  L+
Sbjct: 265 VEIGKLQ 271



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/115 (47%), Positives = 65/115 (56%), Gaps = 4/115 (3%)

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           I +L KL  L L  N L  +PD  G+L  L+ L LS N+ ESLPA I  LK L+ L L N
Sbjct: 60  IKRLAKLEKLDLSNNRLKSLPDEIGELKNLQHLDLSYNEFESLPAVIWELKNLRYLDLSN 119

Query: 228 NKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           NKL  LPT I  LK     L+ L L NNKL  LP EI+ L+ L  L L  N L +
Sbjct: 120 NKLGILPTVIRKLK----NLEILYLSNNKLELLPAEIVELEKLQYLYLGGNRLTL 170


>gi|417761949|ref|ZP_12409946.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417776878|ref|ZP_12424710.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418672964|ref|ZP_13234294.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942211|gb|EKN87831.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410573374|gb|EKQ36424.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410580071|gb|EKQ47902.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 597

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 115/208 (55%), Gaps = 5/208 (2%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKV 130
           FP    KF NLR L+L +   + LP+ I+       +A   L   +++P ++  LKNL+ 
Sbjct: 370 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALG-LNGLKNIPSEIGQLKNLEA 428

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NL  N+LE+ P +I  +  L+ L L  N+L   P EI +L KL  L L  N  T  P  
Sbjct: 429 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 488

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
            G L  L+ L L  NQL +LPA I  LK L+ L L++N+   LP EI  LK    KL++L
Sbjct: 489 IGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLK----KLQTL 544

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L NN+L TLPTEI  L+ L  L L++N
Sbjct: 545 DLRNNQLTTLPTEIGQLQNLQWLYLQNN 572



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 124/249 (49%), Gaps = 24/249 (9%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLL 113
           +N+  L L  N L+  P    +  NL+ LDL +N++   P  I     L +L ++ N L+
Sbjct: 73  KNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLI 132

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L+NL+   L  N+L  FP +I  +  L+ L+L  N L  +P+EI +L  
Sbjct: 133 I---LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKN 189

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N  T +P   G L  L+ L LSDNQL +LP  I  L+ L+ L L NN+L   
Sbjct: 190 LQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRNNRLTVF 249

Query: 234 PTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           P EI  L+ L                    + L++L L NN+L   P EI  L+ L +L 
Sbjct: 250 PKEIGQLQNLQMLCSPENRLTALPKKMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLE 309

Query: 275 LRDNPLVIR 283
           L  NPL ++
Sbjct: 310 LLMNPLSLK 318



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 117/261 (44%), Gaps = 44/261 (16%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNN--------RITHLPQAITNFPLSTL- 106
           +N+ TL L +N L+ FP    +  NL+ L+L  N        RI  L      FP S L 
Sbjct: 280 QNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKL------FPDSNLD 333

Query: 107 ---IARNNLLT----------------------AESLPKDMSNLKNLKVFNLSGNQLEQF 141
              +A N +                        ++S PK +   +NL+  NL        
Sbjct: 334 LREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTL 393

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P +I  +  LKYL LG N L ++P EI +L  L  L+L  N L  +P   G L  L+ L 
Sbjct: 394 PKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLS 453

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           L  N L+  PA I  LK L+ L L  N+  T P EI  L    E L++L L  N+L  LP
Sbjct: 454 LHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKL----ENLQTLNLQRNQLTNLP 509

Query: 262 TEIITLKCLSELSLRDNPLVI 282
            EI  LK L EL L DN   +
Sbjct: 510 AEIEQLKNLQELDLNDNQFTV 530



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 111/221 (50%), Gaps = 11/221 (4%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N+  L LY    S  P   S+  NL+ L L  N + ++P  I     L  L    N 
Sbjct: 376 KFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE 435

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L  E LPK++  L+NL+  +L  N L+ FP +I  +  L+ L L  N     P+EI KL 
Sbjct: 436 L--ERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLE 493

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L+L  N LT++P     L  L+ L L+DNQ   LP  I  LK L++L L NN+L T
Sbjct: 494 NLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTT 553

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTE----IITLKC 269
           LPTEI  L    + L+ L L NN+      E    ++ LKC
Sbjct: 554 LPTEIGQL----QNLQWLYLQNNQFSFEEQERIRKLLPLKC 590



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/169 (39%), Positives = 90/169 (53%), Gaps = 4/169 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLSG +L   P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 38  TYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLEN 97

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L   P    +L +LE+L LS+N+L  LP  I  L+ L+ L L+ NKL T 
Sbjct: 98  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 157

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  L    + L+ L L  N+L  LP EI  LK L  L L+DN   I
Sbjct: 158 PKEIGQL----QNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTI 202


>gi|114623461|ref|XP_528066.2| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1 [Pan
           troglodytes]
          Length = 1052

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 117/239 (48%), Gaps = 26/239 (10%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA-------- 115
           HN L   P       +L  LD+S NR+ HLP +++    L TL   +N LTA        
Sbjct: 144 HNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQL 203

Query: 116 -------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLN 162
                          LP+D+S L+ LK+  LSG +L   P    ++ +L+ L L NN L 
Sbjct: 204 AALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQ 263

Query: 163 HVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKS 222
            +P + + L +L +L+L  N   + P     L  LE L LS NQL S+P+ IS L  L +
Sbjct: 264 ALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLT 323

Query: 223 LLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DNPL+
Sbjct: 324 LWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLI 378



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 112/225 (49%), Gaps = 8/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +I+ L L +N L   P+   S   +LR L L  NR   LP A+      L+ L   +N L
Sbjct: 64  DIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 123

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA    + +S L+ L+  N+S NQL   P Q+  +  L+ L +  N L H+P  ++ L +
Sbjct: 124 TALGA-EVVSALRELRKLNVSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSR 182

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L +  N LT  P     L  LE L +S N+L  LP  IS L+ LK L L   +L TL
Sbjct: 183 LRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 242

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P       C    L+SL+L NN L+ LP +   L+ L  L+L  N
Sbjct: 243 PAGF----CELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSN 283



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 84/173 (48%), Gaps = 3/173 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L   P++ S    L+ L LS   +  LP        L +L+  NN L A  LP   S 
Sbjct: 214 NRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQA--LPAQFSC 271

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ LK+ NLS N  E+FP  +L +  L+ LYL  N L  VP  I+ L +L  L L  N +
Sbjct: 272 LQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRI 331

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
             +PD+  +L  LE L+L  NQ+  LP     L  +    + +N L   P E+
Sbjct: 332 RYLPDSIVELTGLEELVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLIQPPYEV 384



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 7/142 (4%)

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILD-IPTLKYLYLGNNSLNHVPREINKLC-KLHVLSLG 180
           +NL +++  NL  N LE+ P  +   + +L+ L L  N    +P  + +L   L  L + 
Sbjct: 60  ANLGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVS 119

Query: 181 GNSLTDI-PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
            N LT +  +    L +L  L +S NQL +LPA +  L  L+ L +  N+L  LP    +
Sbjct: 120 HNRLTALGAEVVSALRELRKLNVSHNQLPALPAQLGALAHLEELDVSFNRLAHLPD---S 176

Query: 240 LKCLSEKLKSLLLHNNKLRTLP 261
           L CLS +L++L + +N+L   P
Sbjct: 177 LSCLS-RLRTLDVDHNQLTAFP 197



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 171 LCKLHVLSLGGNSLTDIPDTFGD-LYQLEALILSDNQLESLPASISNLKM-LKSLLLHNN 228
           L  +  L+LG N L ++P+  G  L  L  L+L  N+   LP +++ L   L  L + +N
Sbjct: 62  LGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHN 121

Query: 229 KLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +L  L  E+++   L E L+ L + +N+L  LP ++  L  L EL +  N L 
Sbjct: 122 RLTALGAEVVS--ALRE-LRKLNVSHNQLPALPAQLGALAHLEELDVSFNRLA 171


>gi|456825279|gb|EMF73675.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 595

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 84/208 (40%), Positives = 115/208 (55%), Gaps = 5/208 (2%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKV 130
           FP    KF NLR L+L +   + LP+ I+       +A   L   +++P ++  LKNL+ 
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALG-LNGLKNIPSEIGQLKNLEA 426

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NL  N+LE+ P +I  +  L+ L L  N+L   P EI +L KL  L L  N  T  P  
Sbjct: 427 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
            G L  L+ L L  NQL +LPA I  LK L+ L L++N+   LP EI  LK    KL++L
Sbjct: 487 IGKLENLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLK----KLQTL 542

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L NN+L TLPTEI  L+ L  L L++N
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNN 570



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 123/249 (49%), Gaps = 24/249 (9%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLL 113
           +N+  L L  N L+  P    +  NL+ LDL +N++   P  I     L +L ++ N L+
Sbjct: 71  KNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLI 130

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L+NL+   L  N+L  FP +I  +  L+ L+L  N L  +P+EI +L  
Sbjct: 131 I---LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKN 187

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N  T +P   G L  L+ L L DNQL +LP  I  L+ L+ L L NN+L   
Sbjct: 188 LQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVF 247

Query: 234 PTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           P EI  L+ L                    + L++L L NN+L   P EI  L+ L +L 
Sbjct: 248 PKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLE 307

Query: 275 LRDNPLVIR 283
           L  NPL ++
Sbjct: 308 LLMNPLSLK 316



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 88/261 (33%), Positives = 117/261 (44%), Gaps = 44/261 (16%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNN--------RITHLPQAITNFPLSTL- 106
           +N+ TL L +N L+ FP    +  NL+ L+L  N        RI  L      FP S L 
Sbjct: 278 QNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKL------FPDSNLD 331

Query: 107 ---IARNNLLT----------------------AESLPKDMSNLKNLKVFNLSGNQLEQF 141
              +A N +                        ++S PK +   +NL+  NL        
Sbjct: 332 LREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTL 391

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P +I  +  LKYL LG N L ++P EI +L  L  L+L  N L  +P   G L  L+ L 
Sbjct: 392 PKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLS 451

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           L  N L+  PA I  LK L+ L L  N+  T P EI  L    E L++L L  N+L  LP
Sbjct: 452 LHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKL----ENLQTLNLQRNQLTNLP 507

Query: 262 TEIITLKCLSELSLRDNPLVI 282
            EI  LK L EL L DN   +
Sbjct: 508 AEIEQLKNLQELDLNDNQFTV 528



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 111/221 (50%), Gaps = 11/221 (4%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N+  L LY    S  P   S+  NL+ L L  N + ++P  I     L  L    N 
Sbjct: 374 KFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE 433

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L  E LPK++  L+NL+  +L  N L+ FP +I  +  L+ L L  N     P+EI KL 
Sbjct: 434 L--ERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLE 491

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L+L  N LT++P     L  L+ L L+DNQ   LP  I  LK L++L L NN+L T
Sbjct: 492 NLQTLNLQRNQLTNLPAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTT 551

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTE----IITLKC 269
           LPTEI  L    + L+ L L NN+      E    ++ LKC
Sbjct: 552 LPTEIGQL----QNLQWLYLQNNQFSFEEQERIRKLLPLKC 588



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 89/165 (53%), Gaps = 4/165 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLSG +L   P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 36  TYRDLTKALQNPLDVRVLNLSGEKLTVLPKEIGQLKNLQELNLKWNLLTVLPKEIGQLEN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L   P    +L +LE+L LS+N+L  LP  I  L+ L+ L L+ NKL T 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P EI  L    + L+ L L  N+L  LP EI  LK L  L L+DN
Sbjct: 156 PKEIGQL----QNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDN 196


>gi|410213424|gb|JAA03931.1| malignant fibrous histiocytoma amplified sequence 1 [Pan
           troglodytes]
 gi|410267242|gb|JAA21587.1| malignant fibrous histiocytoma amplified sequence 1 [Pan
           troglodytes]
 gi|410301698|gb|JAA29449.1| malignant fibrous histiocytoma amplified sequence 1 [Pan
           troglodytes]
          Length = 1052

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 117/239 (48%), Gaps = 26/239 (10%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA-------- 115
           HN L   P       +L  LD+S NR+ HLP +++    L TL   +N LTA        
Sbjct: 144 HNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQL 203

Query: 116 -------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLN 162
                          LP+D+S L+ LK+  LSG +L   P    ++ +L+ L L NN L 
Sbjct: 204 AALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQ 263

Query: 163 HVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKS 222
            +P + + L +L +L+L  N   + P     L  LE L LS NQL S+P+ IS L  L +
Sbjct: 264 ALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLT 323

Query: 223 LLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DNPL+
Sbjct: 324 LWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLI 378



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 112/225 (49%), Gaps = 8/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +I+ L L +N L   P+   S   +LR L L  NR   LP A+      L+ L   +N L
Sbjct: 64  DIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 123

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA    + +S L+ L+  N+S NQL   P Q+  +  L+ L +  N L H+P  ++ L +
Sbjct: 124 TALGA-EVVSALRELRKLNVSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSR 182

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L +  N LT  P     L  LE L +S N+L  LP  IS L+ LK L L   +L TL
Sbjct: 183 LRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 242

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P       C    L+SL+L NN L+ LP +   L+ L  L+L  N
Sbjct: 243 PAGF----CELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSN 283



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 84/173 (48%), Gaps = 3/173 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L   P++ S    L+ L LS   +  LP        L +L+  NN L A  LP   S 
Sbjct: 214 NRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQA--LPAQFSC 271

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ LK+ NLS N  E+FP  +L +  L+ LYL  N L  VP  I+ L +L  L L  N +
Sbjct: 272 LQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRI 331

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
             +PD+  +L  LE L+L  NQ+  LP     L  +    + +N L   P E+
Sbjct: 332 RYLPDSIVELTGLEELVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLIQPPYEV 384



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 7/142 (4%)

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILD-IPTLKYLYLGNNSLNHVPREINKLC-KLHVLSLG 180
           +NL +++  NL  N LE+ P  +   + +L+ L L  N    +P  + +L   L  L + 
Sbjct: 60  ANLGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVS 119

Query: 181 GNSLTDI-PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
            N LT +  +    L +L  L +S NQL +LPA +  L  L+ L +  N+L  LP    +
Sbjct: 120 HNRLTALGAEVVSALRELRKLNVSHNQLPALPAQLGALAHLEELDVSFNRLAHLPD---S 176

Query: 240 LKCLSEKLKSLLLHNNKLRTLP 261
           L CLS +L++L + +N+L   P
Sbjct: 177 LSCLS-RLRTLDVDHNQLTAFP 197



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 171 LCKLHVLSLGGNSLTDIPDTFGD-LYQLEALILSDNQLESLPASISNLKM-LKSLLLHNN 228
           L  +  L+LG N L ++P+  G  L  L  L+L  N+   LP +++ L   L  L + +N
Sbjct: 62  LGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHN 121

Query: 229 KLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +L  L  E+++   L E L+ L + +N+L  LP ++  L  L EL +  N L 
Sbjct: 122 RLTALGAEVVS--ALRE-LRKLNVSHNQLPALPAQLGALAHLEELDVSFNRLA 171


>gi|418720656|ref|ZP_13279852.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410742930|gb|EKQ91675.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 251

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 86/213 (40%), Positives = 117/213 (54%), Gaps = 9/213 (4%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLTAESLPKDMSNL 125
           L+  P    +F NL+ LDL +N++T LP  I     L  L +  N L T   +P ++  L
Sbjct: 5   LTVLPKELERFKNLQKLDLYSNQLTILPNEIGQLQNLEELDLGANQLRT---IPNEIGQL 61

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           K+L+  +L GNQL   P +I  +  L+ L L NN L  +P EI +L  L  L L  N LT
Sbjct: 62  KDLQELHLDGNQLTILPNEIGQLKNLRSLELYNNQLTALPNEIGQLKDLRSLELYNNQLT 121

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
            +P+  G L  L+ L L++NQ+  LP  + NL  L+ L L  N+L  LP EI  L    +
Sbjct: 122 TLPEEIGRLKNLQKLYLNENQITILPNEVGNLSELEELNLSGNRLTNLPKEIGQL----Q 177

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           KL+SL L NN+L TLP EI  LK L  L L+ N
Sbjct: 178 KLRSLDLSNNQLTTLPKEIGHLKNLRRLVLKGN 210



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 76/189 (40%), Positives = 102/189 (53%), Gaps = 3/189 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L+  P+   +  NL  LDL  N++  +P  I     L  L    N LT
Sbjct: 16  KNLQKLDLYSNQLTILPNEIGQLQNLEELDLGANQLRTIPNEIGQLKDLQELHLDGNQLT 75

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP ++  LKNL+   L  NQL   P +I  +  L+ L L NN L  +P EI +L  L
Sbjct: 76  I--LPNEIGQLKNLRSLELYNNQLTALPNEIGQLKDLRSLELYNNQLTTLPEEIGRLKNL 133

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N +T +P+  G+L +LE L LS N+L +LP  I  L+ L+SL L NN+L TLP
Sbjct: 134 QKLYLNENQITILPNEVGNLSELEELNLSGNRLTNLPKEIGQLQKLRSLDLSNNQLTTLP 193

Query: 235 TEIITLKCL 243
            EI  LK L
Sbjct: 194 KEIGHLKNL 202



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 71/164 (43%), Positives = 94/164 (57%), Gaps = 4/164 (2%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LPK++   KNL+  +L  NQL   P +I  +  L+ L LG N L  +P EI +L  L  L
Sbjct: 8   LPKELERFKNLQKLDLYSNQLTILPNEIGQLQNLEELDLGANQLRTIPNEIGQLKDLQEL 67

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            L GN LT +P+  G L  L +L L +NQL +LP  I  LK L+SL L+NN+L TLP EI
Sbjct: 68  HLDGNQLTILPNEIGQLKNLRSLELYNNQLTALPNEIGQLKDLRSLELYNNQLTTLPEEI 127

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             LK     L+ L L+ N++  LP E+  L  L EL+L  N L 
Sbjct: 128 GRLK----NLQKLYLNENQITILPNEVGNLSELEELNLSGNRLT 167



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 70/190 (36%), Positives = 105/190 (55%), Gaps = 5/190 (2%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           + Q+ +LPN     + +N++ L L  N L   P+   +  +L+ L L  N++T LP  I 
Sbjct: 25  SNQLTILPNEI--GQLQNLEELDLGANQLRTIPNEIGQLKDLQELHLDGNQLTILPNEIG 82

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L +L   NN LTA  LP ++  LK+L+   L  NQL   P +I  +  L+ LYL  
Sbjct: 83  QLKNLRSLELYNNQLTA--LPNEIGQLKDLRSLELYNNQLTTLPEEIGRLKNLQKLYLNE 140

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N +  +P E+  L +L  L+L GN LT++P   G L +L +L LS+NQL +LP  I +LK
Sbjct: 141 NQITILPNEVGNLSELEELNLSGNRLTNLPKEIGQLQKLRSLDLSNNQLTTLPKEIGHLK 200

Query: 219 MLKSLLLHNN 228
            L+ L+L  N
Sbjct: 201 NLRRLVLKGN 210



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 63/142 (44%), Positives = 80/142 (56%), Gaps = 4/142 (2%)

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P ++     L+ L L +N L  +P EI +L  L  L LG N L  IP+  G L  L+ L
Sbjct: 8   LPKELERFKNLQKLDLYSNQLTILPNEIGQLQNLEELDLGANQLRTIPNEIGQLKDLQEL 67

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L  NQL  LP  I  LK L+SL L+NN+L  LP EI  LK     L+SL L+NN+L TL
Sbjct: 68  HLDGNQLTILPNEIGQLKNLRSLELYNNQLTALPNEIGQLK----DLRSLELYNNQLTTL 123

Query: 261 PTEIITLKCLSELSLRDNPLVI 282
           P EI  LK L +L L +N + I
Sbjct: 124 PEEIGRLKNLQKLYLNENQITI 145



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/122 (42%), Positives = 67/122 (54%), Gaps = 4/122 (3%)

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
           +L  +P+E+ +   L  L L  N LT +P+  G L  LE L L  NQL ++P  I  LK 
Sbjct: 4   ALTVLPKELERFKNLQKLDLYSNQLTILPNEIGQLQNLEELDLGANQLRTIPNEIGQLKD 63

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L+ L L  N+L  LP EI  LK     L+SL L+NN+L  LP EI  LK L  L L +N 
Sbjct: 64  LQELHLDGNQLTILPNEIGQLK----NLRSLELYNNQLTALPNEIGQLKDLRSLELYNNQ 119

Query: 280 LV 281
           L 
Sbjct: 120 LT 121


>gi|397467362|ref|XP_003805390.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1 [Pan
           paniscus]
          Length = 995

 Score =  115 bits (289), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 117/239 (48%), Gaps = 26/239 (10%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA-------- 115
           HN L   P       +L  LD+S NR+ HLP +++    L TL   +N LTA        
Sbjct: 87  HNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQL 146

Query: 116 -------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLN 162
                          LP+D+S L+ LK+  LSG +L   P    ++ +L+ L L NN L 
Sbjct: 147 AALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQ 206

Query: 163 HVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKS 222
            +P + + L +L +L+L  N   + P     L  LE L LS NQL S+P+ IS L  L +
Sbjct: 207 ALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLT 266

Query: 223 LLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DNPL+
Sbjct: 267 LWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLI 321



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 102/205 (49%), Gaps = 7/205 (3%)

Query: 76  SKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNL 133
           S   +LR L L  NR   LP A+      L+ L   +N LTA    + +S L+ L+  N+
Sbjct: 27  SALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTALGA-EVVSALRELRKLNV 85

Query: 134 SGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGD 193
           S NQL   P Q+  +  L+ L +  N L H+P  ++ L +L  L +  N LT  P     
Sbjct: 86  SHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLLQ 145

Query: 194 LYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLH 253
           L  LE L +S N+L  LP  IS L+ LK L L   +L TLP       C    L+SL+L 
Sbjct: 146 LAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGF----CELASLESLMLD 201

Query: 254 NNKLRTLPTEIITLKCLSELSLRDN 278
           NN L+ LP +   L+ L  L+L  N
Sbjct: 202 NNGLQALPAQFSCLQRLKMLNLSSN 226



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 84/173 (48%), Gaps = 3/173 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L   P++ S    L+ L LS   +  LP        L +L+  NN L A  LP   S 
Sbjct: 157 NRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQA--LPAQFSC 214

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ LK+ NLS N  E+FP  +L +  L+ LYL  N L  VP  I+ L +L  L L  N +
Sbjct: 215 LQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRI 274

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
             +PD+  +L  LE L+L  NQ+  LP     L  +    + +N L   P E+
Sbjct: 275 RYLPDSIVELTGLEELVLQGNQIAVLPDHFGQLSRVGLWKIKDNPLIQPPYEV 327


>gi|355699846|gb|AES01257.1| leucine rich repeat containing 1 [Mustela putorius furo]
          Length = 404

 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/226 (36%), Positives = 124/226 (54%), Gaps = 7/226 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 185 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS- 243

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 244 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEVIPDGIGKLKKLS 302

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+  GD   L  L+L++N+L +LP SI  LK L +L    NKL +LP 
Sbjct: 303 ILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPK 362

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           EI    C S  L    + +N+L  +P+E+     L  L +  N LV
Sbjct: 363 EIG--GCCS--LTVFCVRDNRLTRIPSEVSQATELHVLDVAGNRLV 404



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 125/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N++   P++ S    L+  D S N +T LP++  
Sbjct: 99  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 158

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 159 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 217

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 218 EIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 277

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTL 260
           L  L++  N L  +P  I  LK LS                   E L  L+L  N+L TL
Sbjct: 278 LTDLVISQNLLEVIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTL 337

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK LS L+   N LV
Sbjct: 338 PKSIGKLKKLSNLNADRNKLV 358



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 112/219 (51%), Gaps = 9/219 (4%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTAESLPKDMS 123
           N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN++     +P+ +S
Sbjct: 79  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDI---PEIPESIS 135

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
             K L++ + SGN L + P    ++  L  L + + SL  +P  I  L  L  L L  N 
Sbjct: 136 FCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENL 195

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT +PD+   L +LE L L +N++ +LP SI  L  LK L L  N+L  LP EI  LK  
Sbjct: 196 LTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLK-- 253

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
              L  L +  N+L  LP EI  L  L++L +  N L +
Sbjct: 254 --NLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEV 290



 Score = 44.3 bits (103), Expect = 0.11,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 67/153 (43%), Gaps = 31/153 (20%)

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L ++P+ F  L +L  L LSDN+++ LP  I+N   L  L +  N +  +P  I   K
Sbjct: 79  NQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCK 138

Query: 242 CLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            L                    + L  L +++  L++LP  I  L  L+ L LR+N L  
Sbjct: 139 ALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLL-- 196

Query: 283 RFVSDMTYKPPSLLELASRTLKVHEIDYSQEHL 315
                 TY P SL +L     ++ E+D     +
Sbjct: 197 ------TYLPDSLTQLR----RLEELDLGNNEI 219


>gi|417760264|ref|ZP_12408290.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417774468|ref|ZP_12422333.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418675383|ref|ZP_13236674.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409943831|gb|EKN89422.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410575801|gb|EKQ38818.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410577545|gb|EKQ45415.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 384

 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 89/231 (38%), Positives = 127/231 (54%), Gaps = 9/231 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP---LSTLIARN 110
           K +N+  L L+ N L+  P    +  NL+ L LS NR+T LP+ I         +L  +N
Sbjct: 141 KLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKN 200

Query: 111 NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
              T   LPK+++ L+NL+  +L  N+L   P +I  +  L+ L L  N L  +P+EI +
Sbjct: 201 KPFTI--LPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQ 258

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L VL L GN LT +P     L  L+ L L  N+ E+ P  I+  + L+ L L  N+L
Sbjct: 259 LKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQKLHLSRNQL 318

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            TLP EI  L    +KL+SL L +N+L TLP EI  LK L +L L +NPL+
Sbjct: 319 TTLPKEIGRL----QKLESLGLDHNQLATLPEEIKQLKNLKKLYLHNNPLL 365



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 98/279 (35%), Positives = 139/279 (49%), Gaps = 21/279 (7%)

Query: 4   NYGSSSSSDSSDSDSFKTV-SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLL 62
           NY +     ++ +++ K    ++ LD S S L  + L  +I  L         +N+  L 
Sbjct: 32  NYTTKEGLYTNLTEALKNPNEVRILDLSRSKL--KILPKEIGQL---------QNLQILN 80

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
             +N L+  P    K  NL+ L L NN++T LP+ I     L  L   NN LT  +LP++
Sbjct: 81  SENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLT--TLPEE 138

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L+NL+  NL  N+L   P +I  +  L+ LYL  N L  +P EI +L  L  LSLGG
Sbjct: 139 IGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGG 198

Query: 182 NS--LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
            +   T +P     L  L+ L L  N+L  LP  I  L+ L+ L L+ N+L  LP EI  
Sbjct: 199 KNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQ 258

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           LK L      L L  N+L  LP EI  L+ L EL+L  N
Sbjct: 259 LKNLL----VLDLSGNQLTILPKEITQLQNLQELNLEYN 293



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 87/233 (37%), Positives = 120/233 (51%), Gaps = 9/233 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K P  +  L L  + L   P    +  NL+ L+  NN++T LP+ I     L  L  +NN
Sbjct: 48  KNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNN 107

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  +LP+++  L+NLKV +L+ NQL   P +I  +  L+ L L  N LN +P+EI +L
Sbjct: 108 QLT--TLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRL 165

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILS--DNQLESLPASISNLKMLKSLLLHNNK 229
             L  L L  N LT +P+  G L  L  L L   +     LP  I+ L+ L+ L L  N+
Sbjct: 166 QNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNR 225

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           L  LP EI  L    + L+ L L+ N+L  LP EI  LK L  L L  N L I
Sbjct: 226 LTVLPKEIGQL----QNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTI 274


>gi|67970427|dbj|BAE01556.1| unnamed protein product [Macaca fascicularis]
          Length = 518

 Score =  115 bits (288), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 158/316 (50%), Gaps = 29/316 (9%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 211 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+  GD   L  L+L++NQL +LP SI  LK L +L    NKL +LP 
Sbjct: 270 ILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPK 329

Query: 236 EI-----ITLKCLSE--------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           EI     +T+ C+ +              +L  L +  N+L  LP  +  LK L  L L 
Sbjct: 330 EIGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTALK-LKALWLS 388

Query: 277 DN---PLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPK 333
           DN   PL+  F +D  Y     +       ++      QE+LP+     LE+  + V+ +
Sbjct: 389 DNQSQPLLT-FQTDTDYTTGEKILTCVLLPQLPSEPTCQENLPR--CGALENLVNDVSDE 445

Query: 334 CKGVFFDNRIEHIKFV 349
                  NR+  I+FV
Sbjct: 446 AWNERAVNRVSAIRFV 461



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 114/223 (51%), Gaps = 9/223 (4%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTA 115
           ++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN +   
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEI--- 94

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+ +S  K L+V + SGN L + P    ++  L  L + + SL  +P  I  L  L 
Sbjct: 95  PEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLA 154

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +PD+   L +LE L L +N++ +LP SI  L  LK L L  N+L  LP 
Sbjct: 155 SLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQ 214

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           EI  LK     L  L +  N+L  LP EI  L  L++L +  N
Sbjct: 215 EIGNLK----NLLCLDVSENRLERLPEEISGLTSLTDLVISQN 253



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 125/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N +   P++ S    L+  D S N +T LP++  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 126 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 185 EIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 244

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTL 260
           L  L++  N L T+P  I  LK LS                   E L  L+L  N+L TL
Sbjct: 245 LTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTL 304

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK LS L+   N LV
Sbjct: 305 PKSIGKLKKLSNLNADRNKLV 325



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 8/203 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ S+D  +  + ++P+ I  +   L  L+   N L    LP+    L  L+   LS N+
Sbjct: 13  HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQL--RELPEQFFQLVKLRKLGLSDNE 70

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           +++ P +I +   L  L +  N +  +P  I+    L V    GN LT +P++F +L  L
Sbjct: 71  IQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNL 130

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
             L ++D  L+SLP +I NL  L SL L  N L  LP  +  L+    +L+ L L NN++
Sbjct: 131 TCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLR----RLEELDLGNNEI 186

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
             LP  I  L  L +L L  N L
Sbjct: 187 YNLPESIGALLHLKDLWLDGNQL 209


>gi|431902291|gb|ELK08792.1| Malignant fibrous histiocytoma-amplified sequence 1 [Pteropus
           alecto]
          Length = 738

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 119/241 (49%), Gaps = 26/241 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTA------ 115
           L HN L   P       +L  LD+S NR+ HLP +++  + L TL   +N LTA      
Sbjct: 142 LSHNQLPSLPAQLGALAHLEELDVSFNRLVHLPDSLSCLYRLRTLDVDHNQLTAFPRQLL 201

Query: 116 ---------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                            LP+D+S L+ LK+  LSG +L   P    ++ +L+ L L NN 
Sbjct: 202 QLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPDGFCELASLESLMLDNNG 261

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P + + L +L +L+L  N   + P     L  LE L LS NQL S+P+ IS L  L
Sbjct: 262 LQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRL 321

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DNPL
Sbjct: 322 LTLWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDNFGQLSRVGLWKIKDNPL 377

Query: 281 V 281
           +
Sbjct: 378 I 378



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 127/294 (43%), Gaps = 69/294 (23%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +I+ L L +N L   PD   S   +LR L L  NR   LP A+      L+ L   +N L
Sbjct: 64  DIEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFAWLPPAVAKLGHHLTELDVSHNRL 123

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI--------LDIP---------TLKYLY- 155
           TA    + +S L+ L+  NLS NQL   P Q+        LD+          +L  LY 
Sbjct: 124 TALG-AEVVSALRELRKLNLSHNQLPSLPAQLGALAHLEELDVSFNRLVHLPDSLSCLYR 182

Query: 156 ----------------------------LGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
                                       + +N L  +P +I+ L  L +L L G  L  +
Sbjct: 183 LRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 242

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE-- 245
           PD F +L  LE+L+L +N L++LPA  S L+ LK L L +N     P  ++ L  L E  
Sbjct: 243 PDGFCELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELY 302

Query: 246 -----------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
                            +L +L L NN++R LP  I+ L  L EL L+ N + +
Sbjct: 303 LSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAV 356



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 85/173 (49%), Gaps = 3/173 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L   P++ S    L+ L LS   +  LP        L +L+  NN L A  LP   S 
Sbjct: 214 NRLRGLPEDISALRALKILWLSGAELGTLPDGFCELASLESLMLDNNGLQA--LPAQFSC 271

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ LK+ NLS N  E+FP  +L +  L+ LYL  N L  VP  I+ L +L  L L  N +
Sbjct: 272 LQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRI 331

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
             +PD+  +L  LE L+L  NQ+  LP +   L  +    + +N L   P E+
Sbjct: 332 RYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEV 384



 Score = 44.7 bits (104), Expect = 0.076,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 66/140 (47%), Gaps = 13/140 (9%)

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREIN-KLCKLHVLSLGGNSLTDIPDTFGDL-YQLE 198
            P  I DI  L    LGNN L  VP  +   L  L VL L  N    +P     L + L 
Sbjct: 58  LPANIGDIEVLN---LGNNGLEEVPDGLGSALGSLRVLVLRRNRFAWLPPAVAKLGHHLT 114

Query: 199 ALILSDNQLESLPAS-ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
            L +S N+L +L A  +S L+ L+ L L +N+L +LP ++  L  L E    L +  N+L
Sbjct: 115 ELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPSLPAQLGALAHLEE----LDVSFNRL 170

Query: 258 RTLPTEIITLKCLSELSLRD 277
             LP    +L CL  L   D
Sbjct: 171 VHLPD---SLSCLYRLRTLD 187



 Score = 37.7 bits (86), Expect = 9.5,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 53/123 (43%), Gaps = 4/123 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
            ++ L L  N L+  P   S    L +L L NNRI +LP +I     L  L+ + N +  
Sbjct: 297 GLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAV 356

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP +   L  + ++ +  N L Q P ++  +  + Y+      L H    +    KL 
Sbjct: 357 --LPDNFGQLSRVGLWKIKDNPLIQPPYEVC-MKGIPYIAAYQKELAHSQPAVQPRLKLL 413

Query: 176 VLS 178
           +L 
Sbjct: 414 LLG 416


>gi|355561805|gb|EHH18437.1| hypothetical protein EGK_15027, partial [Macaca mulatta]
          Length = 514

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 158/316 (50%), Gaps = 29/316 (9%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 142 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS- 200

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 201 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLS 259

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+  GD   L  L+L++NQL +LP SI  LK L +L    NKL +LP 
Sbjct: 260 ILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPK 319

Query: 236 EI-----ITLKCLSE--------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           EI     +T+ C+ +              +L  L +  N+L  LP  +  LK L  L L 
Sbjct: 320 EIGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTALK-LKALWLS 378

Query: 277 DN---PLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPK 333
           DN   PL+  F +D  Y     +       ++      QE+LP+     LE+  + V+ +
Sbjct: 379 DNQSQPLLT-FQTDTDYTTGEKILTCVLLPQLPSEPTCQENLPR--CGALENLVNDVSDE 435

Query: 334 CKGVFFDNRIEHIKFV 349
                  NR+  I+FV
Sbjct: 436 AWSERAVNRVSAIRFV 451



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/224 (36%), Positives = 115/224 (51%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN +  
Sbjct: 27  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEI-- 84

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+ +S  K L+V + SGN L + P    ++  L  L + + SL  +P  I  L  L
Sbjct: 85  -PEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNL 143

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +PD+   L +LE L L +N++ +LP SI  L  LK L L  N+L  LP
Sbjct: 144 ASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELP 203

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK     L  L +  N+L  LP EI  L  L++L +  N
Sbjct: 204 QEIGNLK----NLLCLDVSENRLERLPEEISGLTSLTDLVISQN 243



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 125/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N +   P++ S    L+  D S N +T LP++  
Sbjct: 56  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 115

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 116 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 174

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 175 EIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 234

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTL 260
           L  L++  N L T+P  I  LK LS                   E L  L+L  N+L TL
Sbjct: 235 LTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTL 294

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK LS L+   N LV
Sbjct: 295 PKSIGKLKKLSNLNADRNKLV 315



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 8/203 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ S+D  +  + ++P+ I  +   L  L+   N L    LP+    L  L+   LS N+
Sbjct: 3   HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQL--RELPEQFFQLVKLRKLGLSDNE 60

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           +++ P +I +   L  L +  N +  +P  I+    L V    GN LT +P++F +L  L
Sbjct: 61  IQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNL 120

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
             L ++D  L+SLP +I NL  L SL L  N L  LP  +  L+    +L+ L L NN++
Sbjct: 121 TCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLR----RLEELDLGNNEI 176

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
             LP  I  L  L +L L  N L
Sbjct: 177 YNLPESIGALLHLKDLWLDGNQL 199


>gi|410940571|ref|ZP_11372375.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410784315|gb|EKR73302.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 354

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 87/219 (39%), Positives = 115/219 (52%), Gaps = 7/219 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L+ N L   P        L  L+LS NR++ +P+ +     L TL   +N +   SLPK+
Sbjct: 117 LFRNQLVTVPKEVLLLQTLEKLNLSLNRLSTIPKEVGQLKNLQTLKLSDNQIV--SLPKE 174

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L+ LK F L  N  + FP ++L +  L+ L L  N L  +P+EI +L  L  L L  
Sbjct: 175 IEGLQELKEFILGNNHFKNFPGEVLQLKNLQKLNLSENQLVSIPKEIGQLQNLRDLVLDR 234

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N +T +P     L  L+ L LS+NQL SL   I  LK L+ L L NN+L TLP EI  LK
Sbjct: 235 NQITILPTEVLQLQNLQELHLSENQLTSLSKEIDQLKNLQWLSLRNNRLTTLPKEIGQLK 294

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
                L+ L L NN+L  LP EI  LK L  L L  NPL
Sbjct: 295 ----NLQRLELGNNQLTNLPKEIGQLKGLQRLELDSNPL 329



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/226 (35%), Positives = 122/226 (53%), Gaps = 7/226 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L   NL+ FP    +  NL+ LDL  N +T L + I     L  L   +N LT 
Sbjct: 42  NVRILDLSFQNLTTFPKEIGQLKNLQKLDLGGNELTALSKEIVQLQNLQELSLHSNKLT- 100

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLPK++  L++LK  +L  NQL   P ++L + TL+ L L  N L+ +P+E+ +L  L 
Sbjct: 101 -SLPKEIEQLRSLKNLDLFRNQLVTVPKEVLLLQTLEKLNLSLNRLSTIPKEVGQLKNLQ 159

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N +  +P     L +L+  IL +N  ++ P  +  LK L+ L L  N+L ++P 
Sbjct: 160 TLKLSDNQIVSLPKEIEGLQELKEFILGNNHFKNFPGEVLQLKNLQKLNLSENQLVSIPK 219

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           EI  L    + L+ L+L  N++  LPTE++ L+ L EL L +N L 
Sbjct: 220 EIGQL----QNLRDLVLDRNQITILPTEVLQLQNLQELHLSENQLT 261



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/205 (34%), Positives = 103/205 (50%), Gaps = 22/205 (10%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI----------------T 99
           + ++ L L  N LS  P    +  NL++L LS+N+I  LP+ I                 
Sbjct: 133 QTLEKLNLSLNRLSTIPKEVGQLKNLQTLKLSDNQIVSLPKEIEGLQELKEFILGNNHFK 192

Query: 100 NFPLSTLIARN----NLLTAE--SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKY 153
           NFP   L  +N    NL   +  S+PK++  L+NL+   L  NQ+   P ++L +  L+ 
Sbjct: 193 NFPGEVLQLKNLQKLNLSENQLVSIPKEIGQLQNLRDLVLDRNQITILPTEVLQLQNLQE 252

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           L+L  N L  + +EI++L  L  LSL  N LT +P   G L  L+ L L +NQL +LP  
Sbjct: 253 LHLSENQLTSLSKEIDQLKNLQWLSLRNNRLTTLPKEIGQLKNLQRLELGNNQLTNLPKE 312

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEII 238
           I  LK L+ L L +N L +   E I
Sbjct: 313 IGQLKGLQRLELDSNPLSSKEKEKI 337


>gi|114607924|ref|XP_001156152.1| PREDICTED: leucine-rich repeat-containing protein 1 isoform 1 [Pan
           troglodytes]
 gi|297678399|ref|XP_002817063.1| PREDICTED: leucine-rich repeat-containing protein 1 [Pongo abelii]
 gi|397517578|ref|XP_003828986.1| PREDICTED: leucine-rich repeat-containing protein 1 [Pan paniscus]
 gi|426353583|ref|XP_004044270.1| PREDICTED: leucine-rich repeat-containing protein 1 [Gorilla
           gorilla gorilla]
 gi|410213308|gb|JAA03873.1| leucine rich repeat containing 1 [Pan troglodytes]
 gi|410257926|gb|JAA16930.1| leucine rich repeat containing 1 [Pan troglodytes]
 gi|410336559|gb|JAA37226.1| leucine rich repeat containing 1 [Pan troglodytes]
          Length = 524

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 158/316 (50%), Gaps = 29/316 (9%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 211 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+  GD   L  L+L++NQL +LP SI  LK L +L    NKL +LP 
Sbjct: 270 ILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPK 329

Query: 236 EI-----ITLKCLSE--------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           EI     +T+ C+ +              +L  L +  N+L  LP  +  LK L  L L 
Sbjct: 330 EIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTALK-LKALWLS 388

Query: 277 DN---PLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPK 333
           DN   PL+  F +D  Y     +       ++      QE+LP+     LE+  + V+ +
Sbjct: 389 DNQSQPLLT-FQTDTDYTTGEKILTCVLLPQLPSEPTCQENLPR--CGALENLVNDVSDE 445

Query: 334 CKGVFFDNRIEHIKFV 349
                  NR+  I+FV
Sbjct: 446 AWNERAVNRVSAIRFV 461



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/224 (36%), Positives = 115/224 (51%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN +  
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEI-- 94

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+ +S  K L+V + SGN L + P    ++  L  L + + SL  +P  I  L  L
Sbjct: 95  -PEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNL 153

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +PD+   L +LE L L +N++ +LP SI  L  LK L L  N+L  LP
Sbjct: 154 ASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELP 213

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK     L  L +  N+L  LP EI  L  L++L +  N
Sbjct: 214 QEIGNLK----NLLCLDVSENRLERLPEEISGLTSLTDLVISQN 253



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 125/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N +   P++ S    L+  D S N +T LP++  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 126 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 185 EIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 244

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTL 260
           L  L++  N L T+P  I  LK LS                   E L  L+L  N+L TL
Sbjct: 245 LTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTL 304

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK LS L+   N LV
Sbjct: 305 PKSIGKLKKLSNLNADRNKLV 325



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 8/203 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ S+D  +  + ++P+ I  +   L  L+   N L    LP+    L  L+   LS N+
Sbjct: 13  HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQL--RELPEQFFQLVKLRKLGLSDNE 70

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           +++ P +I +   L  L +  N +  +P  I+    L V    GN LT +P++F +L  L
Sbjct: 71  IQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNL 130

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
             L ++D  L+SLP +I NL  L SL L  N L  LP  +  L+    +L+ L L NN++
Sbjct: 131 TCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLR----RLEELDLGNNEI 186

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
             LP  I  L  L +L L  N L
Sbjct: 187 YNLPESIGALLHLKDLWLDGNQL 209


>gi|410294462|gb|JAA25831.1| leucine rich repeat containing 1 [Pan troglodytes]
          Length = 524

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 158/316 (50%), Gaps = 29/316 (9%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 211 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+  GD   L  L+L++NQL +LP SI  LK L +L    NKL +LP 
Sbjct: 270 ILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPK 329

Query: 236 EI-----ITLKCLSE--------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           EI     +T+ C+ +              +L  L +  N+L  LP  +  LK L  L L 
Sbjct: 330 EIGGGCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTALK-LKALWLS 388

Query: 277 DN---PLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPK 333
           DN   PL+  F +D  Y     +       ++      QE+LP+     LE+  + V+ +
Sbjct: 389 DNQSQPLLT-FQTDTDYTTGEKILTCVLLPQLPSEPTCQENLPR--CGALENLVNDVSDE 445

Query: 334 CKGVFFDNRIEHIKFV 349
                  NR+  I+FV
Sbjct: 446 AWNERAVNRVSAIRFV 461



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/224 (36%), Positives = 115/224 (51%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN +  
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEI-- 94

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+ +S  K L+V + SGN L + P    ++  L  L + + SL  +P  I  L  L
Sbjct: 95  -PEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNL 153

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +PD+   L +LE L L +N++ +LP SI  L  LK L L  N+L  LP
Sbjct: 154 ASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELP 213

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK     L  L +  N+L  LP EI  L  L++L +  N
Sbjct: 214 QEIGNLK----NLLCLDVSENRLERLPEEISGLTSLTDLVISQN 253



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 125/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N +   P++ S    L+  D S N +T LP++  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 126 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 185 EIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 244

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTL 260
           L  L++  N L T+P  I  LK LS                   E L  L+L  N+L TL
Sbjct: 245 LTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTL 304

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK LS L+   N LV
Sbjct: 305 PKSIGKLKKLSNLNADRNKLV 325



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 8/203 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ S+D  +  + ++P+ I  +   L  L+   N L    LP+    L  L+   LS N+
Sbjct: 13  HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQL--RELPEQFFQLVKLRKLGLSDNE 70

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           +++ P +I +   L  L +  N +  +P  I+    L V    GN LT +P++F +L  L
Sbjct: 71  IQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNL 130

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
             L ++D  L+SLP +I NL  L SL L  N L  LP  +  L+    +L+ L L NN++
Sbjct: 131 TCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLR----RLEELDLGNNEI 186

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
             LP  I  L  L +L L  N L
Sbjct: 187 YNLPESIGALLHLKDLWLDGNQL 209


>gi|351698002|gb|EHB00921.1| Malignant fibrous histiocytoma-amplified sequence 1, partial
           [Heterocephalus glaber]
          Length = 1023

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 119/241 (49%), Gaps = 26/241 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA------ 115
           L HN+L   P       +L  LD+S NR+ HLP +++    L TL   +N LTA      
Sbjct: 123 LSHNHLPCLPAQLGALAHLEELDVSFNRLAHLPDSLSCLHRLRTLDVDHNQLTAFPRQLL 182

Query: 116 ---------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                            LP+D+S L+ +K+  LSG +L   P     + +L+ L L NN 
Sbjct: 183 QLAALEELDVSSNRLRGLPEDISALRAIKILWLSGAELGTLPNGFCQLASLESLMLDNNG 242

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P + + L +L +L+L  N   + P T   L  LE L LS NQL S+P+ IS L  L
Sbjct: 243 LQALPEQFSHLQRLKMLNLSSNLFEEFPATLLPLAGLEELYLSRNQLTSVPSLISGLGRL 302

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DNPL
Sbjct: 303 LTLWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDNFGQLSRVGLWKIKDNPL 358

Query: 281 V 281
           +
Sbjct: 359 I 359



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 111/225 (49%), Gaps = 8/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +I+ L L +N L   PD   S   +LR L L  NR   LP A+      L+ L   +N L
Sbjct: 45  DIEVLNLGNNGLEEVPDGLGSALGSLRVLILRRNRFARLPPAVAELGHHLTELDLSHNRL 104

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA    + +S L+ L+  NLS N L   P Q+  +  L+ L +  N L H+P  ++ L +
Sbjct: 105 TALGA-EVVSALRELRKLNLSHNHLPCLPAQLGALAHLEELDVSFNRLAHLPDSLSCLHR 163

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L +  N LT  P     L  LE L +S N+L  LP  IS L+ +K L L   +L TL
Sbjct: 164 LRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRAIKILWLSGAELGTL 223

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P       C    L+SL+L NN L+ LP +   L+ L  L+L  N
Sbjct: 224 PNGF----CQLASLESLMLDNNGLQALPEQFSHLQRLKMLNLSSN 264



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/173 (34%), Positives = 87/173 (50%), Gaps = 3/173 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L   P++ S    ++ L LS   +  LP        L +L+  NN L A  LP+  S+
Sbjct: 195 NRLRGLPEDISALRAIKILWLSGAELGTLPNGFCQLASLESLMLDNNGLQA--LPEQFSH 252

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ LK+ NLS N  E+FP  +L +  L+ LYL  N L  VP  I+ L +L  L L  N +
Sbjct: 253 LQRLKMLNLSSNLFEEFPATLLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRI 312

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
             +PD+  +L  LE L+L  NQ+  LP +   L  +    + +N L   P E+
Sbjct: 313 RYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEV 365



 Score = 46.2 bits (108), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 50/140 (35%), Positives = 65/140 (46%), Gaps = 13/140 (9%)

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREIN-KLCKLHVLSLGGNSLTDIPDTFGDL-YQLE 198
            P  I DI  L    LGNN L  VP  +   L  L VL L  N    +P    +L + L 
Sbjct: 39  LPANIGDIEVLN---LGNNGLEEVPDGLGSALGSLRVLILRRNRFARLPPAVAELGHHLT 95

Query: 199 ALILSDNQLESLPAS-ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
            L LS N+L +L A  +S L+ L+ L L +N L  LP ++  L  L E    L +  N+L
Sbjct: 96  ELDLSHNRLTALGAEVVSALRELRKLNLSHNHLPCLPAQLGALAHLEE----LDVSFNRL 151

Query: 258 RTLPTEIITLKCLSELSLRD 277
             LP    +L CL  L   D
Sbjct: 152 AHLPD---SLSCLHRLRTLD 168


>gi|388452646|ref|NP_001253435.1| leucine-rich repeat-containing protein 1 [Macaca mulatta]
 gi|380784439|gb|AFE64095.1| leucine-rich repeat-containing protein 1 [Macaca mulatta]
          Length = 524

 Score =  115 bits (288), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 158/316 (50%), Gaps = 29/316 (9%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 211 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+  GD   L  L+L++NQL +LP SI  LK L +L    NKL +LP 
Sbjct: 270 ILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPK 329

Query: 236 EI-----ITLKCLSE--------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           EI     +T+ C+ +              +L  L +  N+L  LP  +  LK L  L L 
Sbjct: 330 EIGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTALK-LKALWLS 388

Query: 277 DN---PLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPK 333
           DN   PL+  F +D  Y     +       ++      QE+LP+     LE+  + V+ +
Sbjct: 389 DNQSQPLLT-FQTDTDYTTGEKILTCVLLPQLPSEPTCQENLPR--CGALENLVNDVSDE 445

Query: 334 CKGVFFDNRIEHIKFV 349
                  NR+  I+FV
Sbjct: 446 AWNERAVNRVSAIRFV 461



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/224 (36%), Positives = 115/224 (51%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN +  
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEI-- 94

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+ +S  K L+V + SGN L + P    ++  L  L + + SL  +P  I  L  L
Sbjct: 95  -PEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNL 153

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +PD+   L +LE L L +N++ +LP SI  L  LK L L  N+L  LP
Sbjct: 154 ASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELP 213

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK     L  L +  N+L  LP EI  L  L++L +  N
Sbjct: 214 QEIGNLK----NLLCLDVSENRLERLPEEISGLTSLTDLVISQN 253



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 125/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N +   P++ S    L+  D S N +T LP++  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 126 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 185 EIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 244

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTL 260
           L  L++  N L T+P  I  LK LS                   E L  L+L  N+L TL
Sbjct: 245 LTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTL 304

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK LS L+   N LV
Sbjct: 305 PKSIGKLKKLSNLNADRNKLV 325



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 8/203 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ S+D  +  + ++P+ I  +   L  L+   N L    LP+    L  L+   LS N+
Sbjct: 13  HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQL--RELPEQFFQLVKLRKLGLSDNE 70

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           +++ P +I +   L  L +  N +  +P  I+    L V    GN LT +P++F +L  L
Sbjct: 71  IQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNL 130

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
             L ++D  L+SLP +I NL  L SL L  N L  LP  +  L+    +L+ L L NN++
Sbjct: 131 TCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLR----RLEELDLGNNEI 186

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
             LP  I  L  L +L L  N L
Sbjct: 187 YNLPESIGALLHLKDLWLDGNQL 209


>gi|402867304|ref|XP_003897800.1| PREDICTED: leucine-rich repeat-containing protein 1 [Papio anubis]
          Length = 524

 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 158/316 (50%), Gaps = 29/316 (9%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 211 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+  GD   L  L+L++NQL +LP SI  LK L +L    NKL +LP 
Sbjct: 270 ILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPK 329

Query: 236 EI-----ITLKCLSE--------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           EI     +T+ C+ +              +L  L +  N+L  LP  +  LK L  L L 
Sbjct: 330 EIGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTALK-LKALWLS 388

Query: 277 DN---PLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPK 333
           DN   PL+  F +D  Y     +       ++      QE+LP+     LE+  + V+ +
Sbjct: 389 DNQSQPLLT-FQTDTDYTTGEKILTCVLLPQLPSEPTCQENLPR--CGALENLVNDVSDE 445

Query: 334 CKGVFFDNRIEHIKFV 349
                  NR+  I+FV
Sbjct: 446 AWNERAINRVSAIRFV 461



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/224 (36%), Positives = 115/224 (51%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN +  
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEI-- 94

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+ +S  K L+V + SGN L + P    ++  L  L + + SL  +P  I  L  L
Sbjct: 95  -PEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNL 153

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +PD+   L +LE L L +N++ +LP SI  L  LK L L  N+L  LP
Sbjct: 154 ASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELP 213

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK     L  L +  N+L  LP EI  L  L++L +  N
Sbjct: 214 QEIGNLK----NLLCLDVSENRLERLPEEISGLTSLTDLVISQN 253



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 125/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N +   P++ S    L+  D S N +T LP++  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 126 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 185 EIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 244

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTL 260
           L  L++  N L T+P  I  LK LS                   E L  L+L  N+L TL
Sbjct: 245 LTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTL 304

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK LS L+   N LV
Sbjct: 305 PKSIGKLKKLSNLNADRNKLV 325



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 8/203 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ S+D  +  + ++P+ I  +   L  L+   N L    LP+    L  L+   LS N+
Sbjct: 13  HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQL--RELPEQFFQLVKLRKLGLSDNE 70

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           +++ P +I +   L  L +  N +  +P  I+    L V    GN LT +P++F +L  L
Sbjct: 71  IQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNL 130

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
             L ++D  L+SLP +I NL  L SL L  N L  LP  +  L+    +L+ L L NN++
Sbjct: 131 TCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLR----RLEELDLGNNEI 186

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
             LP  I  L  L +L L  N L
Sbjct: 187 YNLPESIGALLHLKDLWLDGNQL 209


>gi|355748651|gb|EHH53134.1| hypothetical protein EGM_13704 [Macaca fascicularis]
          Length = 524

 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 104/316 (32%), Positives = 158/316 (50%), Gaps = 29/316 (9%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 211 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+  GD   L  L+L++NQL +LP SI  LK L +L    NKL +LP 
Sbjct: 270 ILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPK 329

Query: 236 EI-----ITLKCLSE--------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           EI     +T+ C+ +              +L  L +  N+L  LP  +  LK L  L L 
Sbjct: 330 EIGGCCSLTVFCVRDNRLTRIPAEMSQATELHVLDVAGNRLLHLPLSLTALK-LKALWLS 388

Query: 277 DN---PLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPK 333
           DN   PL+  F +D  Y     +       ++      QE+LP+     LE+  + V+ +
Sbjct: 389 DNQSQPLLT-FQTDTDYTTGEKILTCVLLPQLPSEPTCQENLPR--CGALENLVNDVSDE 445

Query: 334 CKGVFFDNRIEHIKFV 349
                  NR+  I+FV
Sbjct: 446 AWNERAVNRVSAIRFV 461



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/224 (36%), Positives = 115/224 (51%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN +  
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEI-- 94

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+ +S  K L+V + SGN L + P    ++  L  L + + SL  +P  I  L  L
Sbjct: 95  -PEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNL 153

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +PD+   L +LE L L +N++ +LP SI  L  LK L L  N+L  LP
Sbjct: 154 ASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELP 213

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK     L  L +  N+L  LP EI  L  L++L +  N
Sbjct: 214 QEIGNLK----NLLCLDVSENRLERLPEEISGLTSLTDLVISQN 253



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 125/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N +   P++ S    L+  D S N +T LP++  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 126 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 185 EIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 244

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTL 260
           L  L++  N L T+P  I  LK LS                   E L  L+L  N+L TL
Sbjct: 245 LTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTL 304

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK LS L+   N LV
Sbjct: 305 PKSIGKLKKLSNLNADRNKLV 325



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 98/200 (49%), Gaps = 8/200 (4%)

Query: 83  SLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
            +D  +  + ++P+ I  +   L  L+   N L    LP+    L  L+   LS N++++
Sbjct: 16  GIDKRHCSLVYVPEEIYRYARSLEELLLDANQL--RELPEQFFQLVKLRKLGLSDNEIQR 73

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +I +   L  L +  N +  +P  I+    L V    GN LT +P++F +L  L  L
Sbjct: 74  LPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCL 133

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            ++D  L+SLP +I NL  L SL L  N L  LP  +  L+    +L+ L L NN++  L
Sbjct: 134 SVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLR----RLEELDLGNNEIYNL 189

Query: 261 PTEIITLKCLSELSLRDNPL 280
           P  I  L  L +L L  N L
Sbjct: 190 PESIGALLHLKDLWLDGNQL 209


>gi|431838264|gb|ELK00196.1| Leucine-rich repeat-containing protein 1 [Pteropus alecto]
          Length = 489

 Score =  115 bits (287), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 117/209 (55%), Gaps = 7/209 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I  LP++I     L  L    N L+ 
Sbjct: 117 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLS- 175

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 176 -ELPQEVGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEIIPEGIGKLKKLS 234

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+T GD   L  L+L++N+L +LP SI  LK L +L    NKL +LP 
Sbjct: 235 ILKVDQNRLTQLPETVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLMSLPK 294

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           EI    C S  L    + +N+L  +P E+
Sbjct: 295 EIG--GCCS--LTVFCVRDNRLTRIPAEV 319



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 121/242 (50%), Gaps = 11/242 (4%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N++   P++ S    L+  D S N +T LP++  
Sbjct: 31  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 90

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 91  ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 149

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            +  +P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 150 EIYSLPESIGALLHLKDLWLDGNQLSELPQEVGNLKNLLCLDVSENRLERLPEEISGLTS 209

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L  L++  N L  +P  I  LK    KL  L +  N+L  LP  +   + L+EL L +N 
Sbjct: 210 LTDLVISQNLLEIIPEGIGKLK----KLSILKVDQNRLTQLPETVGDCESLTELVLTENR 265

Query: 280 LV 281
           L+
Sbjct: 266 LL 267



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/208 (37%), Positives = 108/208 (51%), Gaps = 9/208 (4%)

Query: 77  KFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTAESLPKDMSNLKNLKVFNLS 134
           +   LR L LS+N I  LP  I NF  L  L ++RN++     +P+ +S  K L++ + S
Sbjct: 22  QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDI---PEIPESISFCKALQIADFS 78

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
           GN L + P    ++  L  L + + SL  +P  I  L  L  L L  N LT +PD+   L
Sbjct: 79  GNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQL 138

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
            +LE L L +N++ SLP SI  L  LK L L  N+L  LP E+  LK     L  L +  
Sbjct: 139 RRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLSELPQEVGNLK----NLLCLDVSE 194

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPLVI 282
           N+L  LP EI  L  L++L +  N L I
Sbjct: 195 NRLERLPEEISGLTSLTDLVISQNLLEI 222


>gi|418710225|ref|ZP_13270998.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410769454|gb|EKR44694.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 244

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 86/227 (37%), Positives = 121/227 (53%), Gaps = 7/227 (3%)

Query: 91  ITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIP 149
           +  LP+ I  F  L  L    N LT  +LPK++  L+ L+V NL+GNQ    P +I  + 
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLT--TLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQ 63

Query: 150 TLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            L+ L L  N    +P+EI +L  L VL+L GN LT +P   G L +LEAL L  N+   
Sbjct: 64  NLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQKLEALNLDHNRFTI 123

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
            P  I   + LK L L  ++L+TLP EI+ L    + L+SL L +N+L +LP EI  L+ 
Sbjct: 124 FPKEIRQQQSLKWLRLSGDQLKTLPKEILLL----QNLQSLHLDSNQLTSLPKEIGQLQS 179

Query: 270 LSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLP 316
           L EL+L+DN L          +   +L L S +  + E    QE LP
Sbjct: 180 LFELNLQDNKLKTLPKEIGQLQNLQVLRLYSNSFSLKEKQKIQELLP 226



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/189 (34%), Positives = 89/189 (47%), Gaps = 24/189 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           + +  L L  N  +  P    +  NL  LDL  N+ T                       
Sbjct: 40  QKLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFT----------------------- 76

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLPK++  L+NL+V NL+GNQL   P +I  +  L+ L L +N     P+EI +   L 
Sbjct: 77  -SLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLK 135

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L G+ L  +P     L  L++L L  NQL SLP  I  L+ L  L L +NKL+TLP 
Sbjct: 136 WLRLSGDQLKTLPKEILLLQNLQSLHLDSNQLTSLPKEIGQLQSLFELNLQDNKLKTLPK 195

Query: 236 EIITLKCLS 244
           EI  L+ L 
Sbjct: 196 EIGQLQNLQ 204



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 24/173 (13%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           +N++ L L  N  +  P    +  NLR L+L+ N++T                       
Sbjct: 63  QNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLT----------------------- 99

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLPK++  L+ L+  NL  N+   FP +I    +LK+L L  + L  +P+EI  L  L 
Sbjct: 100 -SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQ 158

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
            L L  N LT +P   G L  L  L L DN+L++LP  I  L+ L+ L L++N
Sbjct: 159 SLHLDSNQLTSLPKEIGQLQSLFELNLQDNKLKTLPKEIGQLQNLQVLRLYSN 211



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/127 (38%), Positives = 66/127 (51%), Gaps = 4/127 (3%)

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           +G + L  +PR I     L  L+L GN LT +P   G L +L  L L+ NQ  SLP  I 
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTTLPKEIGQLQKLRVLNLAGNQFTSLPKEIG 60

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            L+ L+ L L  N+  +LP EI  L    + L+ L L  N+L +LP EI  L+ L  L+L
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEIGQL----QNLRVLNLAGNQLTSLPKEIGQLQKLEALNL 116

Query: 276 RDNPLVI 282
             N   I
Sbjct: 117 DHNRFTI 123


>gi|417402294|gb|JAA47999.1| Putative leucine-rich repeat-containing protein 1 [Desmodus
           rotundus]
          Length = 524

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 104/322 (32%), Positives = 161/322 (50%), Gaps = 41/322 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NL+NL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 211 -ELPQEIGNLQNLLCLDVSENKLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+T GD   L  L+L++N+L +LP SI  LK L +L    NKL +LP 
Sbjct: 270 ILKVDQNRLTQLPETVGDCESLTELVLTENRLPALPKSIGKLKKLSNLNADRNKLVSLPK 329

Query: 236 EI-----ITLKCLSE--------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           EI     +T+ C+ +              +L  L +  N+L  LP  +  LK L  L L 
Sbjct: 330 EIGGCCSLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTALK-LKALWLS 388

Query: 277 DN---PLVIRFVSDMTYKPPSLLELASRTL------KVHEIDYSQEHLPQNLVQYLESAH 327
           DN   PL       +T++  + L    + L      +V      QE+LP+     LES  
Sbjct: 389 DNQSQPL-------LTFQTDTDLTTGEKVLTCVLLPQVPSEPTCQENLPR--CGALESLV 439

Query: 328 HCVNPKCKGVFFDNRIEHIKFV 349
           + V+ +       NR+  I+F+
Sbjct: 440 NAVSDEAWNERAVNRVSAIRFL 461



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 116/224 (51%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN++  
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDI-- 94

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+ +S  K L++ + SGN L + P    ++  L  L + + SL  +P  I  L  L
Sbjct: 95  -PEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNL 153

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +PD+   L +LE L L +N++ +LP SI  L  LK L L  N+L  LP
Sbjct: 154 ASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELP 213

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  L    + L  L +  NKL  LP EI  L  L++L +  N
Sbjct: 214 QEIGNL----QNLLCLDVSENKLERLPEEISGLTSLTDLVISQN 253



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/241 (32%), Positives = 122/241 (50%), Gaps = 11/241 (4%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N++   P++ S    L+  D S N +T LP++  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 126 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 185 EIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLQNLLCLDVSENKLERLPEEISGLTS 244

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L  L++  N L T+P  I  LK    KL  L +  N+L  LP  +   + L+EL L +N 
Sbjct: 245 LTDLVISQNLLETIPDGIGKLK----KLSILKVDQNRLTQLPETVGDCESLTELVLTENR 300

Query: 280 L 280
           L
Sbjct: 301 L 301



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 100/202 (49%), Gaps = 8/202 (3%)

Query: 81  LRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           + ++D  +  + ++P+ I  +   L  L+   N L    LP+    L  L+   LS N++
Sbjct: 14  VETIDKRHCSLVYVPEEIYRYARSLEELLLDANQL--RELPEQFFQLVKLRKLGLSDNEI 71

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
           ++ P +I +   L  L +  N +  +P  I+    L +    GN LT +P++F +L  L 
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLT 131

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L ++D  L+SLP +I NL  L SL L  N L  LP  +  L+    +L+ L L NN++ 
Sbjct: 132 CLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLR----RLEELDLGNNEIY 187

Query: 259 TLPTEIITLKCLSELSLRDNPL 280
            LP  I  L  L +L L  N L
Sbjct: 188 NLPESIGALLHLKDLWLDGNQL 209


>gi|24216021|ref|NP_713502.1| hypothetical protein LA_3322 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075102|ref|YP_005989421.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
 gi|24197249|gb|AAN50520.1| putative lipoprotein [Leptospira interrogans serovar Lai str.
           56601]
 gi|353458893|gb|AER03438.1| putative lipoprotein [Leptospira interrogans serovar Lai str. IPAV]
          Length = 284

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/225 (38%), Positives = 122/225 (54%), Gaps = 7/225 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P  +  L L    L  FP    +  NL+ L LS+N+ T LP+ I     L +L   +N L
Sbjct: 47  PLGVRILNLSRQKLKTFPKEIGQLKNLQELHLSSNQFTTLPKEIEQLQNLKSLDLWDNQL 106

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
             ++LPK++  L+NLK  +L  NQL   P +I  +  L+ L L NN L  +P+EI +L  
Sbjct: 107 --KTLPKEIGKLQNLKSLDLGSNQLTILPKEIGQLQNLQKLNLWNNQLKTLPKEIGQLQN 164

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  ++L  N L  +P+  G L  LE+L L+ NQL  LP  I  L+ L+SL L+ N+L  L
Sbjct: 165 LQKMNLDKNRLNTLPNEIGQLQNLESLYLNYNQLTILPKEIGQLQNLESLYLNYNQLTML 224

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P EI  L    + L+ L L  N+L TLP EI  L+ L  L L+ N
Sbjct: 225 PQEIGQL----QNLEGLYLKYNQLTTLPKEIGRLQNLKRLYLKYN 265



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 99/184 (53%), Gaps = 3/184 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ +L L+ N L   P    K  NL+SLDL +N++T LP+ I     L  L   NN L 
Sbjct: 94  QNLKSLDLWDNQLKTLPKEIGKLQNLKSLDLGSNQLTILPKEIGQLQNLQKLNLWNNQL- 152

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            ++LPK++  L+NL+  NL  N+L   P +I  +  L+ LYL  N L  +P+EI +L  L
Sbjct: 153 -KTLPKEIGQLQNLQKMNLDKNRLNTLPNEIGQLQNLESLYLNYNQLTILPKEIGQLQNL 211

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P   G L  LE L L  NQL +LP  I  L+ LK L L  N+  +  
Sbjct: 212 ESLYLNYNQLTMLPQEIGQLQNLEGLYLKYNQLTTLPKEIGRLQNLKRLYLKYNQFSSKE 271

Query: 235 TEII 238
            E I
Sbjct: 272 KEKI 275



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 75/189 (39%), Positives = 104/189 (55%), Gaps = 5/189 (2%)

Query: 94  LPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKY 153
           L +A+ N PL   I   +    ++ PK++  LKNL+  +LS NQ    P +I  +  LK 
Sbjct: 40  LTKALQN-PLGVRILNLSRQKLKTFPKEIGQLKNLQELHLSSNQFTTLPKEIEQLQNLKS 98

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           L L +N L  +P+EI KL  L  L LG N LT +P   G L  L+ L L +NQL++LP  
Sbjct: 99  LDLWDNQLKTLPKEIGKLQNLKSLDLGSNQLTILPKEIGQLQNLQKLNLWNNQLKTLPKE 158

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           I  L+ L+ + L  N+L TLP EI  L    + L+SL L+ N+L  LP EI  L+ L  L
Sbjct: 159 IGQLQNLQKMNLDKNRLNTLPNEIGQL----QNLESLYLNYNQLTILPKEIGQLQNLESL 214

Query: 274 SLRDNPLVI 282
            L  N L +
Sbjct: 215 YLNYNQLTM 223



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 65/170 (38%), Positives = 92/170 (54%), Gaps = 4/170 (2%)

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           +T   L K + N   +++ NLS  +L+ FP +I  +  L+ L+L +N    +P+EI +L 
Sbjct: 35  VTYRDLTKALQNPLGVRILNLSRQKLKTFPKEIGQLKNLQELHLSSNQFTTLPKEIEQLQ 94

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N L  +P   G L  L++L L  NQL  LP  I  L+ L+ L L NN+L+T
Sbjct: 95  NLKSLDLWDNQLKTLPKEIGKLQNLKSLDLGSNQLTILPKEIGQLQNLQKLNLWNNQLKT 154

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           LP EI  L    + L+ + L  N+L TLP EI  L+ L  L L  N L I
Sbjct: 155 LPKEIGQL----QNLQKMNLDKNRLNTLPNEIGQLQNLESLYLNYNQLTI 200


>gi|418755276|ref|ZP_13311483.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
 gi|409964287|gb|EKO32177.1| leucine rich repeat protein [Leptospira santarosai str. MOR084]
          Length = 358

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 74/182 (40%), Positives = 100/182 (54%), Gaps = 19/182 (10%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++ NL+NL+  NL+ NQ    P +I ++  L+ L LG N L  +P EI  L  L  
Sbjct: 156 TLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIWNLQNLKT 215

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L GN L  +P+  G+L  L+ L L  NQL +LP  I  L+ LK L L+NN+L TLP E
Sbjct: 216 LDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNRLTTLPKE 275

Query: 237 IITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRD 277
           I  L+ L                    + L+ L L+NN+L TLP EI  L+ L EL+L  
Sbjct: 276 IEDLQNLKILSLGSNQLATLPKEVGKLQNLQELYLYNNRLTTLPKEIGKLQNLKELNLGG 335

Query: 278 NP 279
           NP
Sbjct: 336 NP 337



 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 75/182 (41%), Positives = 103/182 (56%), Gaps = 5/182 (2%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTAESLPKDMS 123
           N L+  P       NL+ L+L++N+ T LP+ I N   L  L + RN L T   LP+++ 
Sbjct: 152 NKLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTT---LPEEIW 208

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           NL+NLK  +L GNQL   P +I ++  L+ L L  N L  +P+EI KL  L  L L  N 
Sbjct: 209 NLQNLKTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNNR 268

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT +P    DL  L+ L L  NQL +LP  +  L+ L+ L L+NN+L TLP EI  L+ L
Sbjct: 269 LTTLPKEIEDLQNLKILSLGSNQLATLPKEVGKLQNLQELYLYNNRLTTLPKEIGKLQNL 328

Query: 244 SE 245
            E
Sbjct: 329 KE 330



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 65/148 (43%), Positives = 86/148 (58%), Gaps = 4/148 (2%)

Query: 134 SGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGD 193
            GN+L   P +I ++  L+ L L +N    +P+EI  L KL  LSLG N LT +P+   +
Sbjct: 150 GGNKLTTLPKEIGNLQNLQDLNLNSNQFTTLPKEIWNLQKLQKLSLGRNQLTTLPEEIWN 209

Query: 194 LYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLH 253
           L  L+ L L  NQL +LP  I NL+ L++L L  N+L TLP EI  L    + LK L L+
Sbjct: 210 LQNLKTLDLEGNQLATLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKL----QNLKKLYLY 265

Query: 254 NNKLRTLPTEIITLKCLSELSLRDNPLV 281
           NN+L TLP EI  L+ L  LSL  N L 
Sbjct: 266 NNRLTTLPKEIEDLQNLKILSLGSNQLA 293



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 92/189 (48%), Gaps = 26/189 (13%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           + Q   LP   +N   + +  L L  N L+  P+      NL++LDL  N++        
Sbjct: 174 SNQFTTLPKEIWNL--QKLQKLSLGRNQLTTLPEEIWNLQNLKTLDLEGNQLA------- 224

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                            +LP+++ NL+NL+  +L GNQL   P +I  +  LK LYL NN
Sbjct: 225 -----------------TLPEEIGNLQNLQTLDLEGNQLTTLPKEIGKLQNLKKLYLYNN 267

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L  +P+EI  L  L +LSLG N L  +P   G L  L+ L L +N+L +LP  I  L+ 
Sbjct: 268 RLTTLPKEIEDLQNLKILSLGSNQLATLPKEVGKLQNLQELYLYNNRLTTLPKEIGKLQN 327

Query: 220 LKSLLLHNN 228
           LK L L  N
Sbjct: 328 LKELNLGGN 336


>gi|417760913|ref|ZP_12408927.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417775393|ref|ZP_12423246.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418673628|ref|ZP_13234941.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942907|gb|EKN88510.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410574718|gb|EKQ37747.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410579289|gb|EKQ47137.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 349

 Score =  115 bits (287), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 87/248 (35%), Positives = 122/248 (49%), Gaps = 22/248 (8%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N++ L+    NL  FP   +K  NL+ L+L  N+I+ LP+ I     L  L   +N 
Sbjct: 40  KLQNLERLIFNGKNLKIFPKTITKLRNLKELNLGRNQISSLPEEIGELQNLKELDLSDNQ 99

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  SLP ++ NLKNL++  L  N++   P        LK LYL  N     P EI +L 
Sbjct: 100 LT--SLPVEIGNLKNLEILTLYRNRISVLPKDFSLPQNLKILYLSQNKFRKFPDEILQLQ 157

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L    N L ++P+  G L  L  L L  N+L+ LP+S S  + LKSL L+ N+ + 
Sbjct: 158 NLEWLDFSENQLKELPEKLGQLQNLNILYLLGNELKVLPSSFSEFRSLKSLNLNYNRFQV 217

Query: 233 LPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            P E+I+LK L                    + L SL L  N+LR LP  I  L+ L  L
Sbjct: 218 FPKELISLKKLETLELTGNQFTFLPEEIGNLDNLNSLFLEANRLRQLPKGIGKLQNLERL 277

Query: 274 SLRDNPLV 281
            L++N L 
Sbjct: 278 YLQENQLT 285



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 88/247 (35%), Positives = 123/247 (49%), Gaps = 30/247 (12%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N+  L L  N +S  P+   +  NL+ LDLS+N++T LP  I N   L  L    N 
Sbjct: 63  KLRNLKELNLGRNQISSLPEEIGELQNLKELDLSDNQLTSLPVEIGNLKNLEILTLYRNR 122

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           ++   LPKD S  +NLK+  LS N+  +FP +IL +  L++L    N L  +P ++ +L 
Sbjct: 123 ISV--LPKDFSLPQNLKILYLSQNKFRKFPDEILQLQNLEWLDFSENQLKELPEKLGQLQ 180

Query: 173 KLHVLSLGGNSLTDIPDTFGD-----------------------LYQLEALILSDNQLES 209
            L++L L GN L  +P +F +                       L +LE L L+ NQ   
Sbjct: 181 NLNILYLLGNELKVLPSSFSEFRSLKSLNLNYNRFQVFPKELISLKKLETLELTGNQFTF 240

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           LP  I NL  L SL L  N+LR LP  I  L    + L+ L L  N+L TLP EI +L  
Sbjct: 241 LPEEIGNLDNLNSLFLEANRLRQLPKGIGKL----QNLERLYLQENQLTTLPEEIGSLSN 296

Query: 270 LSELSLR 276
           L  L L+
Sbjct: 297 LKGLYLQ 303



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 55/143 (38%), Positives = 78/143 (54%), Gaps = 4/143 (2%)

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           L+ F  +I+ +  L+ L     +L   P+ I KL  L  L+LG N ++ +P+  G+L  L
Sbjct: 31  LKSFTEEIVKLQNLERLIFNGKNLKIFPKTITKLRNLKELNLGRNQISSLPEEIGELQNL 90

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
           + L LSDNQL SLP  I NLK L+ L L+ N++  LP +      L + LK L L  NK 
Sbjct: 91  KELDLSDNQLTSLPVEIGNLKNLEILTLYRNRISVLPKDF----SLPQNLKILYLSQNKF 146

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
           R  P EI+ L+ L  L   +N L
Sbjct: 147 RKFPDEILQLQNLEWLDFSENQL 169



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 87/167 (52%), Gaps = 4/167 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           +S  +++  L+NL+    +G  L+ FP  I  +  LK L LG N ++ +P EI +L  L 
Sbjct: 32  KSFTEEIVKLQNLERLIFNGKNLKIFPKTITKLRNLKELNLGRNQISSLPEEIGELQNLK 91

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +P   G+L  LE L L  N++  LP   S  + LK L L  NK R  P 
Sbjct: 92  ELDLSDNQLTSLPVEIGNLKNLEILTLYRNRISVLPKDFSLPQNLKILYLSQNKFRKFPD 151

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           EI+ L    + L+ L    N+L+ LP ++  L+ L+ L L  N L +
Sbjct: 152 EILQL----QNLEWLDFSENQLKELPEKLGQLQNLNILYLLGNELKV 194


>gi|186686533|ref|YP_001869729.1| hypothetical protein Npun_R6524 [Nostoc punctiforme PCC 73102]
 gi|186468985|gb|ACC84786.1| leucine-rich repeat protein [Nostoc punctiforme PCC 73102]
          Length = 1124

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 80/213 (37%), Positives = 115/213 (53%), Gaps = 7/213 (3%)

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNL 125
            L+  P+  +  T L+ LDLS N++T LP+AI +   L TL   NN LT   LP+ +++L
Sbjct: 31  ELTEIPEAIASLTQLQQLDLSRNQVTQLPEAIASLTQLQTLDLSNNKLT--QLPEAIASL 88

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
             L+  +LS NQL + P  I  +  L+ L L NN L  +P  I  L +L  L L  N LT
Sbjct: 89  ARLQRLDLSNNQLTELPEAIASLAQLQELNLRNNQLTELPEAIASLTRLQRLDLSNNQLT 148

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           ++P+    L QL++  LS N+L  LP S+S L  L+     +N LR +P+ I  LK    
Sbjct: 149 ELPEAIASLTQLQSFDLSHNELTELPNSLSRLLYLEIFDCGSNLLRQVPSVIKELK---- 204

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            LK L ++ N L  +P+ I  L  L  LS+  N
Sbjct: 205 GLKELYIYANDLEVIPSWICDLHVLEILSIGGN 237



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 92/275 (33%), Positives = 137/275 (49%), Gaps = 23/275 (8%)

Query: 23  SIKTLDFSYSSLDS--ETLATQIEL----LPNNDYNKKPENIDTLL------LYHNNLSF 70
            ++TLD S + L    E +A+   L    L NN   + PE I +L       L +N L+ 
Sbjct: 67  QLQTLDLSNNKLTQLPEAIASLARLQRLDLSNNQLTELPEAIASLAQLQELNLRNNQLTE 126

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLK 129
            P+  +  T L+ LDLSNN++T LP+AI +   L +    +N LT   LP  +S L  L+
Sbjct: 127 LPEAIASLTRLQRLDLSNNQLTELPEAIASLTQLQSFDLSHNELT--ELPNSLSRLLYLE 184

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
           +F+   N L Q P  I ++  LK LY+  N L  +P  I  L  L +LS+GGN ++++P 
Sbjct: 185 IFDCGSNLLRQVPSVIKELKGLKELYIYANDLEVIPSWICDLHVLEILSIGGNQISELPK 244

Query: 190 TFGDLYQLEALILS----DNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           +   L  LE +IL      N L  LP  I  +K ++ +  +N +L  LP  +     L E
Sbjct: 245 SLDKLQSLEFIILGADDGGNPLSKLPPCIQRIKQIRRIWANNCELHFLPDWLNEFPQLEE 304

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
               L L +N L  LP  +  L  L ++ L  NPL
Sbjct: 305 ----LYLGSNCLTDLPASLGQLPHLDDIQLDHNPL 335



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 113/224 (50%), Gaps = 13/224 (5%)

Query: 55  PENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLI 107
           PE I +L       L  N ++  P+  +  T L++LDLSNN++T LP+AI +   L  L 
Sbjct: 36  PEAIASLTQLQQLDLSRNQVTQLPEAIASLTQLQTLDLSNNKLTQLPEAIASLARLQRLD 95

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE 167
             NN LT   LP+ +++L  L+  NL  NQL + P  I  +  L+ L L NN L  +P  
Sbjct: 96  LSNNQLT--ELPEAIASLAQLQELNLRNNQLTELPEAIASLTRLQRLDLSNNQLTELPEA 153

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           I  L +L    L  N LT++P++   L  LE      N L  +P+ I  LK LK L ++ 
Sbjct: 154 IASLTQLQSFDLSHNELTELPNSLSRLLYLEIFDCGSNLLRQVPSVIKELKGLKELYIYA 213

Query: 228 NKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
           N L  +P+ I  L      L+ L +  N++  LP  +  L+ L 
Sbjct: 214 NDLEVIPSWICDLHV----LEILSIGGNQISELPKSLDKLQSLE 253



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 72/201 (35%), Positives = 108/201 (53%), Gaps = 7/201 (3%)

Query: 83  SLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
            LDLS   +T +P+AI +   L  L    N +T   LP+ +++L  L+  +LS N+L Q 
Sbjct: 24  ELDLSKIELTEIPEAIASLTQLQQLDLSRNQVT--QLPEAIASLTQLQTLDLSNNKLTQL 81

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P  I  +  L+ L L NN L  +P  I  L +L  L+L  N LT++P+    L +L+ L 
Sbjct: 82  PEAIASLARLQRLDLSNNQLTELPEAIASLAQLQELNLRNNQLTELPEAIASLTRLQRLD 141

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           LS+NQL  LP +I++L  L+S  L +N+L  LP  +  L      L+     +N LR +P
Sbjct: 142 LSNNQLTELPEAIASLTQLQSFDLSHNELTELPNSLSRLLY----LEIFDCGSNLLRQVP 197

Query: 262 TEIITLKCLSELSLRDNPLVI 282
           + I  LK L EL +  N L +
Sbjct: 198 SVIKELKGLKELYIYANDLEV 218



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/173 (36%), Positives = 93/173 (53%), Gaps = 11/173 (6%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            +P+ +++L  L+  +LS NQ+ Q P  I  +  L+ L L NN L  +P  I  L +L  
Sbjct: 34  EIPEAIASLTQLQQLDLSRNQVTQLPEAIASLTQLQTLDLSNNKLTQLPEAIASLARLQR 93

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N LT++P+    L QL+ L L +NQL  LP +I++L  L+ L L NN+L  LP  
Sbjct: 94  LDLSNNQLTELPEAIASLAQLQELNLRNNQLTELPEAIASLTRLQRLDLSNNQLTELPEA 153

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITL------KCLSELSLRDNPLVIR 283
           I +L     +L+S  L +N+L  LP  +  L       C S L LR  P VI+
Sbjct: 154 IASLT----QLQSFDLSHNELTELPNSLSRLLYLEIFDCGSNL-LRQVPSVIK 201


>gi|456875031|gb|EMF90265.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 526

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 99/296 (33%), Positives = 141/296 (47%), Gaps = 38/296 (12%)

Query: 20  KTVSIKTLDFSYSSLDSETLATQIE--------LLPNNDYNKKPENIDTLL------LYH 65
           K   ++ LD +Y+SL   TL  +I          LPNN     P+ I+ L       L H
Sbjct: 97  KLQKLEWLDLNYNSL--ATLPKEIGKLQKLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAH 154

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSN 124
           N L+  P+   K   L+ L L  N+ T LP+ I     L  L   +N  T  +LPK++  
Sbjct: 155 NQLTTLPEEIGKLQKLKELHLDGNQFTTLPKEIEKLQKLKELHLGSNRFT--TLPKEIKK 212

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+NL+  NL  N+    P +I  +  L++L L +N    +P+EI KL  L  L+L  N  
Sbjct: 213 LQNLQWLNLDSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIKKLQNLQWLNLDSNRF 272

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T +P   G+L +L+ L L+ NQL +LP  I  L+ L+ L L  N+L TLP EI  L+ L 
Sbjct: 273 TTLPKEIGNLQKLQKLSLAHNQLTTLPKEIGKLQSLQRLTLWENQLTTLPKEIGNLQNLQ 332

Query: 245 -------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                              + L+ L L  N+  TLP EI  L+ L +L L  N L 
Sbjct: 333 KLNLNNNPLTTLPKEIGKLQNLQQLFLGGNQFTTLPKEIGNLQNLQKLDLYYNKLT 388



 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 110/313 (35%), Positives = 149/313 (47%), Gaps = 54/313 (17%)

Query: 16  SDSFKTV--SIKTL-DFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFP 72
           S+ F T+   IK L +  + +LDS    T    LP     KK +N+  L L  N  +  P
Sbjct: 200 SNRFTTLPKEIKKLQNLQWLNLDSNRFTT----LPKEI--KKLQNLQWLNLDSNRFTTLP 253

Query: 73  DNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVF 131
               K  NL+ L+L +NR T LP+ I N   L  L   +N LT  +LPK++  L++L+  
Sbjct: 254 KEIKKLQNLQWLNLDSNRFTTLPKEIGNLQKLQKLSLAHNQLT--TLPKEIGKLQSLQRL 311

Query: 132 NLSGNQLEQFPIQIL-----------------------DIPTLKYLYLGNNSLNHVPREI 168
            L  NQL   P +I                         +  L+ L+LG N    +P+EI
Sbjct: 312 TLWENQLTTLPKEIGNLQNLQKLNLNNNPLTTLPKEIGKLQNLQQLFLGGNQFTTLPKEI 371

Query: 169 NKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
             L  L  L L  N LT +P   G+L  L+ L L +NQL +LP  I NL+ L+SL L  N
Sbjct: 372 GNLQNLQKLDLYYNKLTTLPKEIGNLQNLQKLDLYNNQLTTLPKEIGNLQSLESLDLSYN 431

Query: 229 KLRTLPTEII-------------TLKCLS------EKLKSLLLHNNKLRTLPTEIITLKC 269
            L TLP EI               LK L       +KL++L L+ N+L TLP EI  L+ 
Sbjct: 432 DLTTLPKEIGKLQKLKKLELYYNQLKTLPKEIEKLQKLETLGLYGNQLTTLPEEIGKLQK 491

Query: 270 LSELSLRDNPLVI 282
           L EL L DNP +I
Sbjct: 492 LQELDLGDNPSLI 504



 Score =  110 bits (276), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 87/250 (34%), Positives = 122/250 (48%), Gaps = 30/250 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI----------------T 99
           +N+  L LY   L+  P    K   L  LDL+ N +  LP+ I                T
Sbjct: 76  QNLQKLSLYGKQLTTLPKEIGKLQKLEWLDLNYNSLATLPKEIGKLQKLDDLRLPNNQLT 135

Query: 100 NFP--------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
            FP        L  L   +N LT  +LP+++  L+ LK  +L GNQ    P +I  +  L
Sbjct: 136 TFPKEIEKLQKLQKLSLAHNQLT--TLPEEIGKLQKLKELHLDGNQFTTLPKEIEKLQKL 193

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           K L+LG+N    +P+EI KL  L  L+L  N  T +P     L  L+ L L  N+  +LP
Sbjct: 194 KELHLGSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLP 253

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             I  L+ L+ L L +N+  TLP EI  L    +KL+ L L +N+L TLP EI  L+ L 
Sbjct: 254 KEIKKLQNLQWLNLDSNRFTTLPKEIGNL----QKLQKLSLAHNQLTTLPKEIGKLQSLQ 309

Query: 272 ELSLRDNPLV 281
            L+L +N L 
Sbjct: 310 RLTLWENQLT 319



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/170 (42%), Positives = 96/170 (56%), Gaps = 8/170 (4%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK++ NL+NL+  +L G QL   P +I  +  L++L L  NSL  +P+EI KL KL  
Sbjct: 67  NLPKEIGNLQNLQKLSLYGKQLTTLPKEIGKLQKLEWLDLNYNSLATLPKEIGKLQKLDD 126

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N LT  P     L +L+ L L+ NQL +LP  I  L+ LK L L  N+  TLP E
Sbjct: 127 LRLPNNQLTTFPKEIEKLQKLQKLSLAHNQLTTLPEEIGKLQKLKELHLDGNQFTTLPKE 186

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVS 286
           I  L    +KLK L L +N+  TLP EI  L+ L  L+L  N    RF +
Sbjct: 187 IEKL----QKLKELHLGSNRFTTLPKEIKKLQNLQWLNLDSN----RFTT 228



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/220 (35%), Positives = 109/220 (49%), Gaps = 11/220 (5%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLK 126
           L+  P       NL+ L L   ++T LP+ I     L  L    N L   +LPK++  L+
Sbjct: 65  LTNLPKEIGNLQNLQKLSLYGKQLTTLPKEIGKLQKLEWLDLNYNSLA--TLPKEIGKLQ 122

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
            L    L  NQL  FP +I  +  L+ L L +N L  +P EI KL KL  L L GN  T 
Sbjct: 123 KLDDLRLPNNQLTTFPKEIEKLQKLQKLSLAHNQLTTLPEEIGKLQKLKELHLDGNQFTT 182

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P     L +L+ L L  N+  +LP  I  L+ L+ L L +N+  TLP EI  L    + 
Sbjct: 183 LPKEIEKLQKLKELHLGSNRFTTLPKEIKKLQNLQWLNLDSNRFTTLPKEIKKL----QN 238

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVS 286
           L+ L L +N+  TLP EI  L+ L  L+L  N    RF +
Sbjct: 239 LQWLNLDSNRFTTLPKEIKKLQNLQWLNLDSN----RFTT 274



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 88/258 (34%), Positives = 125/258 (48%), Gaps = 35/258 (13%)

Query: 15  DSDSFKTV--SIKTL-DFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFF 71
           DS+ F T+   IK L +  + +LDS    T    LP    N   + +  L L HN L+  
Sbjct: 245 DSNRFTTLPKEIKKLQNLQWLNLDSNRFTT----LPKEIGN--LQKLQKLSLAHNQLTTL 298

Query: 72  PDNASKFTNLRSLDLSNNRITHLPQAITNFP------------------------LSTLI 107
           P    K  +L+ L L  N++T LP+ I N                          L  L 
Sbjct: 299 PKEIGKLQSLQRLTLWENQLTTLPKEIGNLQNLQKLNLNNNPLTTLPKEIGKLQNLQQLF 358

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE 167
              N  T  +LPK++ NL+NL+  +L  N+L   P +I ++  L+ L L NN L  +P+E
Sbjct: 359 LGGNQFT--TLPKEIGNLQNLQKLDLYYNKLTTLPKEIGNLQNLQKLDLYNNQLTTLPKE 416

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           I  L  L  L L  N LT +P   G L +L+ L L  NQL++LP  I  L+ L++L L+ 
Sbjct: 417 IGNLQSLESLDLSYNDLTTLPKEIGKLQKLKKLELYYNQLKTLPKEIEKLQKLETLGLYG 476

Query: 228 NKLRTLPTEIITLKCLSE 245
           N+L TLP EI  L+ L E
Sbjct: 477 NQLTTLPEEIGKLQKLQE 494


>gi|124010573|ref|ZP_01695196.1| leucine-rich repeat-containing protein 1 [Microscilla marina ATCC
           23134]
 gi|123982251|gb|EAY23831.1| leucine-rich repeat-containing protein 1 [Microscilla marina ATCC
           23134]
          Length = 519

 Score =  114 bits (286), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 88/225 (39%), Positives = 120/225 (53%), Gaps = 8/225 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K + ++ L LY+N L   P    K T L+ LDLS NR+ +LPQ +TN   L  L  R N 
Sbjct: 275 KLKQLEQLDLYNNRLKTVPKELGKLTALKKLDLSRNRLQNLPQELTNAQALEKLNLRGNA 334

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT   LPK++ NL+ LK  NL  N+L   P  +  +  L+ L L  N+L  +P  +  L 
Sbjct: 335 LT--QLPKNLGNLQQLKRLNLDANRLVGLPESLGKLKNLESLDLRENALKKLPESLGGLE 392

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  L L  N+LT +P++ G L  LE+L    N LE LP SI  LK LK + L  N+L  
Sbjct: 393 KLKNLQLRKNALTKLPESIGKLQNLESLDSWGNALEGLPESIGGLKKLKKMNLAYNQLTE 452

Query: 233 LPTEIITLKCLSEKLKSLLLHNNK-LRTLPTEIITLKCLSELSLR 276
           LP  +  L    E L++L L NN  L+ LP  +  LK L    ++
Sbjct: 453 LPESLGKL----ENLQTLNLWNNSTLQKLPKSLGNLKNLQSFKMQ 493



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/229 (36%), Positives = 119/229 (51%), Gaps = 7/229 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           KK +N++ L L +N L   P       +L+ L L NN +  +P+ I +   L  L  + N
Sbjct: 205 KKLKNLEVLKLNNNALRTLPKELGSLKSLKELHLQNNLLKTVPKEIGDLQQLKKLNLKMN 264

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
               E LPK++  LK L+  +L  N+L+  P ++  +  LK L L  N L ++P+E+   
Sbjct: 265 --RVEGLPKELGKLKQLEQLDLYNNRLKTVPKELGKLTALKKLDLSRNRLQNLPQELTNA 322

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L+L GN+LT +P   G+L QL+ L L  N+L  LP S+  LK L+SL L  N L+
Sbjct: 323 QALEKLNLRGNALTQLPKNLGNLQQLKRLNLDANRLVGLPESLGKLKNLESLDLRENALK 382

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            LP  +  L    EKLK+L L  N L  LP  I  L+ L  L    N L
Sbjct: 383 KLPESLGGL----EKLKNLQLRKNALTKLPESIGKLQNLESLDSWGNAL 427



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 86/259 (33%), Positives = 123/259 (47%), Gaps = 38/259 (14%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF--------------- 101
           N+  + L HN L   P+   K  +L +L+L++N+I  LP  I                  
Sbjct: 82  NLQIVDLSHNQLGKLPEFLFKLRHLHTLNLAHNQIKELPTGIARLNKLKYLNIVGNPIKK 141

Query: 102 ---------PLSTLIARNNLLTA-ESLPKDMSNLKNL--------KVFNLSGNQLEQFPI 143
                     L+TL A   LL   E L K      NL        +V+ L  + L Q P+
Sbjct: 142 LPAELTQLSQLATLKADKKLLVQWEMLRKKNKLFTNLEEALKTPAQVYKLELHSLRQIPV 201

Query: 144 QIL-DIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
           Q L  +  L+ L L NN+L  +P+E+  L  L  L L  N L  +P   GDL QL+ L L
Sbjct: 202 QKLKKLKNLEVLKLNNNALRTLPKELGSLKSLKELHLQNNLLKTVPKEIGDLQQLKKLNL 261

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
             N++E LP  +  LK L+ L L+NN+L+T+P E+  L      LK L L  N+L+ LP 
Sbjct: 262 KMNRVEGLPKELGKLKQLEQLDLYNNRLKTVPKELGKLTA----LKKLDLSRNRLQNLPQ 317

Query: 263 EIITLKCLSELSLRDNPLV 281
           E+   + L +L+LR N L 
Sbjct: 318 ELTNAQALEKLNLRGNALT 336



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 96/310 (30%), Positives = 140/310 (45%), Gaps = 62/310 (20%)

Query: 33  SLDSETLAT---QIELLPNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRS 83
           S++SE  A    QI  L +N   K PE      ++ TL L HN +   P   ++   L+ 
Sbjct: 72  SINSEVTALTNLQIVDLSHNQLGKLPEFLFKLRHLHTLNLAHNQIKELPTGIARLNKLKY 131

Query: 84  LDLSNNRITHLPQAITNF-PLSTLIA-------------RNNLLT--AESLP-------- 119
           L++  N I  LP  +T    L+TL A             +N L T   E+L         
Sbjct: 132 LNIVGNPIKKLPAELTQLSQLATLKADKKLLVQWEMLRKKNKLFTNLEEALKTPAQVYKL 191

Query: 120 ----------KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREIN 169
                     + +  LKNL+V  L+ N L   P ++  + +LK L+L NN L  VP+EI 
Sbjct: 192 ELHSLRQIPVQKLKKLKNLEVLKLNNNALRTLPKELGSLKSLKELHLQNNLLKTVPKEIG 251

Query: 170 KLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
            L +L  L+L  N +  +P   G L QLE L L +N+L+++P  +  L  LK L L  N+
Sbjct: 252 DLQQLKKLNLKMNRVEGLPKELGKLKQLEQLDLYNNRLKTVPKELGKLTALKKLDLSRNR 311

Query: 230 LRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCL 270
           L+ LP E+   + L                    ++LK L L  N+L  LP  +  LK L
Sbjct: 312 LQNLPQELTNAQALEKLNLRGNALTQLPKNLGNLQQLKRLNLDANRLVGLPESLGKLKNL 371

Query: 271 SELSLRDNPL 280
             L LR+N L
Sbjct: 372 ESLDLRENAL 381



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 122/262 (46%), Gaps = 48/262 (18%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTL----IARNNLL 113
           +  L L  + L       +  TNL+ +DLS+N++  LP+ +  F L  L    +A N + 
Sbjct: 60  LQELKLAQDQLDSINSEVTALTNLQIVDLSHNQLGKLPEFL--FKLRHLHTLNLAHNQI- 116

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYL------------------- 154
             + LP  ++ L  LK  N+ GN +++ P ++  +  L  L                   
Sbjct: 117 --KELPTGIARLNKLKYLNIVGNPIKKLPAELTQLSQLATLKADKKLLVQWEMLRKKNKL 174

Query: 155 ---------------YLGNNSLNHVP-REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
                           L  +SL  +P +++ KL  L VL L  N+L  +P   G L  L+
Sbjct: 175 FTNLEEALKTPAQVYKLELHSLRQIPVQKLKKLKNLEVLKLNNNALRTLPKELGSLKSLK 234

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L L +N L+++P  I +L+ LK L L  N++  LP E+  LK L +    L L+NN+L+
Sbjct: 235 ELHLQNNLLKTVPKEIGDLQQLKKLNLKMNRVEGLPKELGKLKQLEQ----LDLYNNRLK 290

Query: 259 TLPTEIITLKCLSELSLRDNPL 280
           T+P E+  L  L +L L  N L
Sbjct: 291 TVPKELGKLTALKKLDLSRNRL 312



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 93/322 (28%), Positives = 141/322 (43%), Gaps = 59/322 (18%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHL---PQAITNFPLSTLIAR 109
           K P  +  L L    L     N   FT L+ L L+ +++  +     A+TN  +  L + 
Sbjct: 32  KDPTKVYRLDLSGQKLKAISRNIHVFTRLQELKLAQDQLDSINSEVTALTNLQIVDL-SH 90

Query: 110 NNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREIN 169
           N L     LP+ +  L++L   NL+ NQ+++ P  I  +  LKYL +  N +  +P E+ 
Sbjct: 91  NQL---GKLPEFLFKLRHLHTLNLAHNQIKELPTGIARLNKLKYLNIVGNPIKKLPAELT 147

Query: 170 KLCKL----------------------------------HVLSLGGNSLTDIP-DTFGDL 194
           +L +L                                   V  L  +SL  IP      L
Sbjct: 148 QLSQLATLKADKKLLVQWEMLRKKNKLFTNLEEALKTPAQVYKLELHSLRQIPVQKLKKL 207

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
             LE L L++N L +LP  + +LK LK L L NN L+T+P EI  L    ++LK L L  
Sbjct: 208 KNLEVLKLNNNALRTLPKELGSLKSLKELHLQNNLLKTVPKEIGDL----QQLKKLNLKM 263

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEH 314
           N++  LP E+  LK L +L L +N L           P  L +L +    + ++D S+  
Sbjct: 264 NRVEGLPKELGKLKQLEQLDLYNNRL--------KTVPKELGKLTA----LKKLDLSRNR 311

Query: 315 LPQNLVQYLESAHHCVNPKCKG 336
           L QNL Q L +A        +G
Sbjct: 312 L-QNLPQELTNAQALEKLNLRG 332


>gi|421120079|ref|ZP_15580393.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347165|gb|EKO98084.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 426

 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 91/226 (40%), Positives = 130/226 (57%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+++L L HN L+  P    +  NL SL L +N++  LP+ I     L  L  RNN LT
Sbjct: 187 QNLESLGLDHNQLNVLPKEIGQLQNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLT 246

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+   L+ N+L   P +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 247 --TLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNL 304

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L GN L  +P+  G L +L+ L L +NQL  LP  +  L+ L+SL L +N+L  LP
Sbjct: 305 QELDLDGNQLITLPENIGQLQRLQTLYLGNNQLNVLPNKVEQLQNLESLDLEHNQLNALP 364

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L    +KL++L L  N+L TLP EI  LK L +L L +NPL
Sbjct: 365 KEIGKL----QKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPL 406



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 116/231 (50%), Gaps = 22/231 (9%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLK 129
            P    K  NL+ L LS N++  LP+ I     L  L    N LTA  +PK++  L+NL+
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTA--IPKEIGQLQNLQ 144

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
             NL+ NQL   P  I  +  L+ LYLG+N  N + +EI +L  L  L L  N L  +P 
Sbjct: 145 ELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPK 204

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS----- 244
             G L  LE+L L  NQL  LP  I  L+ L+ L L NN+L TLP EI  L+ L      
Sbjct: 205 EIGQLQNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 245 --------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                         + L+ L L+ N+L TLP EI  L+ L EL L  N L+
Sbjct: 265 KNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLI 315



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 79/220 (35%), Positives = 109/220 (49%), Gaps = 35/220 (15%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP------------- 102
           +N+++L L HN L+  P    +  NL+ L L NN++T LP+ I                 
Sbjct: 210 QNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLT 269

Query: 103 -----------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
                      L  L    N LT  +LPK++  L+NL+  +L GNQL   P  I  +  L
Sbjct: 270 TLPEEIGQLQNLQKLKLYENQLT--TLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRL 327

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           + LYLGNN LN +P ++ +L  L  L L  N L  +P   G L +L+ L L  NQL +LP
Sbjct: 328 QTLYLGNNQLNVLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLP 387

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLL 251
             I  LK LK L LHNN    LP+E I      E+++ LL
Sbjct: 388 EEIKQLKNLKKLYLHNN---PLPSEKI------ERIRKLL 418



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 128/245 (52%), Gaps = 22/245 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L+  P    +  NL+ L+L++N++  LP+ I     L TL   +N   
Sbjct: 118 QNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFN 177

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             S+ K++  L+NL+   L  NQL   P +I  +  L+ L L +N LN +P+EI +L  L
Sbjct: 178 --SILKEIGQLQNLESLGLDHNQLNVLPKEIGQLQNLESLGLDHNQLNVLPKEIGQLQNL 235

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  N LT +P   G L  L+ L+L+ N+L +LP  I  L+ L+ L L+ N+L TLP
Sbjct: 236 QILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLP 295

Query: 235 TEIITLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            EI  L+ L E                   +L++L L NN+L  LP ++  L+ L  L L
Sbjct: 296 KEIGQLQNLQELDLDGNQLITLPENIGQLQRLQTLYLGNNQLNVLPNKVEQLQNLESLDL 355

Query: 276 RDNPL 280
             N L
Sbjct: 356 EHNQL 360



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 105/217 (48%), Gaps = 31/217 (14%)

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMS 123
           Y+ N++    N     N+R L+LS +++T LP  I       L+  ++     +LPK++ 
Sbjct: 37  YYRNITEVLKNPQ---NVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLI-ALPKEIG 92

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            L+NL+  +LS NQL                         +P EI +L  L  L L  N 
Sbjct: 93  KLQNLQQLHLSKNQLM-----------------------ALPEEIGQLQNLQKLKLYENQ 129

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT IP   G L  L+ L L+ NQL +LP  I  L+ L++L L +N+  ++  EI  L   
Sbjct: 130 LTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQL--- 186

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            + L+SL L +N+L  LP EI  L+ L  L L  N L
Sbjct: 187 -QNLESLGLDHNQLNVLPKEIGQLQNLESLGLDHNQL 222


>gi|456971318|gb|EMG11957.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 267

 Score =  114 bits (285), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 121/228 (53%), Gaps = 7/228 (3%)

Query: 90  RITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDI 148
            +  LP+ I  F  L  L    N LT  +LPK++  L+ L+V NL+GNQ    P +I  +
Sbjct: 28  ELESLPRVIGLFQNLEKLNLDGNQLT--TLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQL 85

Query: 149 PTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLE 208
             L+ L L  N    +P+EI +L  L VL+L GN LT +P   G L +LEAL L  N+  
Sbjct: 86  QNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQKLEALNLDHNRFT 145

Query: 209 SLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLK 268
             P  I   + LK L L  ++L+TLP EI+ L    + L+SL L +N+L +LP EI  L+
Sbjct: 146 IFPKEIRQQQSLKWLRLSGDQLKTLPKEILLL----QNLQSLHLDSNQLTSLPKEIGQLQ 201

Query: 269 CLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLP 316
            L EL+L+DN L          +   +L L S +  + E    QE LP
Sbjct: 202 SLFELNLQDNKLKTLPKEIGQLQNLQVLRLYSNSFSLKEEQKIQELLP 249



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 64/182 (35%), Positives = 86/182 (47%), Gaps = 24/182 (13%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM 122
           L  N  +  P    +  NL  LDL  N+ T                        SLPK++
Sbjct: 70  LAGNQFTSLPKEIGQLQNLERLDLDGNQFT------------------------SLPKEI 105

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             L+NL+V NL+GNQL   P +I  +  L+ L L +N     P+EI +   L  L L G+
Sbjct: 106 GQLQNLRVLNLAGNQLTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGD 165

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            L  +P     L  L++L L  NQL SLP  I  L+ L  L L +NKL+TLP EI  L+ 
Sbjct: 166 QLKTLPKEILLLQNLQSLHLDSNQLTSLPKEIGQLQSLFELNLQDNKLKTLPKEIGQLQN 225

Query: 243 LS 244
           L 
Sbjct: 226 LQ 227



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 24/173 (13%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           +N++ L L  N  +  P    +  NLR L+L+ N++T                       
Sbjct: 86  QNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLT----------------------- 122

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLPK++  L+ L+  NL  N+   FP +I    +LK+L L  + L  +P+EI  L  L 
Sbjct: 123 -SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQ 181

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
            L L  N LT +P   G L  L  L L DN+L++LP  I  L+ L+ L L++N
Sbjct: 182 SLHLDSNQLTSLPKEIGQLQSLFELNLQDNKLKTLPKEIGQLQNLQVLRLYSN 234



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 51/138 (36%), Positives = 71/138 (51%), Gaps = 4/138 (2%)

Query: 145 ILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD 204
           IL++     + +G + L  +PR I     L  L+L GN LT +P   G L +L  L L+ 
Sbjct: 13  ILEMSMNTRISMGLHELESLPRVIGLFQNLEKLNLDGNQLTTLPKEIGQLQKLRVLNLAG 72

Query: 205 NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           NQ  SLP  I  L+ L+ L L  N+  +LP EI  L    + L+ L L  N+L +LP EI
Sbjct: 73  NQFTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQL----QNLRVLNLAGNQLTSLPKEI 128

Query: 265 ITLKCLSELSLRDNPLVI 282
             L+ L  L+L  N   I
Sbjct: 129 GQLQKLEALNLDHNRFTI 146


>gi|344240334|gb|EGV96437.1| Malignant fibrous histiocytoma-amplified sequence 1-like
           [Cricetulus griseus]
          Length = 1025

 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 117/241 (48%), Gaps = 26/241 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA------ 115
           L HN L   P       +L  LD+S NR+ HLP + +    L TL   +N LT       
Sbjct: 125 LSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDHNQLTTFPRQLL 184

Query: 116 ---------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                            LP+D+S L+ LK+  LSG +L   P    ++ +L+ L L NN 
Sbjct: 185 QLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDNNG 244

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P E ++L +L +L+L  N   + P     L  LE L LS NQL S+P+ I+ L  L
Sbjct: 245 LQALPPEFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRL 304

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DNPL
Sbjct: 305 LTLWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDNFGQLSRVGLWKIKDNPL 360

Query: 281 V 281
           +
Sbjct: 361 I 361



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 110/225 (48%), Gaps = 8/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +I+ L L +N L   P+   S   +LR L L  NR   LP A+      L+ L   +N L
Sbjct: 47  DIEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 106

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T     + +S L+ L+  NLS NQL   P Q+  +  L+ L +  N L H+P   + L  
Sbjct: 107 TVLGA-EVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNH 165

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L +  N LT  P     L  LE L +S N+L  LP  IS L+ LK L L   +L TL
Sbjct: 166 LRTLDVDHNQLTTFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 225

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P+      C    L+SL+L NN L+ LP E   L+ L  L+L  N
Sbjct: 226 PSGF----CELASLESLMLDNNGLQALPPEFSRLQRLKMLNLSSN 266



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 85/173 (49%), Gaps = 3/173 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L   P++ S    L+ L LS   +  LP        L +L+  NN L A  LP + S 
Sbjct: 197 NRLRGLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLQA--LPPEFSR 254

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ LK+ NLS N  E+FP  +L +  L+ LYL  N L  VP  I  L +L  L L  N +
Sbjct: 255 LQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRLLTLWLDNNRI 314

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
             +PD+  +L  LE L+L  NQ+  LP +   L  +    + +N L   P E+
Sbjct: 315 RYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEV 367



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 5/110 (4%)

Query: 174 LHVLSLGGNSLTDIPDTFGD-LYQLEALILSDNQLESLPASISNLKM-LKSLLLHNNKLR 231
           + VL+LG N L D+P+  G  L  L  L+L  N+   LP +++ L   L  L + +N+L 
Sbjct: 48  IEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 107

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L  E+++   L E L+ L L +N+L  LP ++  L  L EL +  N L 
Sbjct: 108 VLGAEVVS--ALRE-LRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLA 154



 Score = 44.7 bits (104), Expect = 0.071,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 65/143 (45%), Gaps = 10/143 (6%)

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREIN-KLCKLHVLSLGGNSLTDIPDTFGDL-YQLE 198
            P  I DI  L    LGNN L  VP  +   L  L VL L  N    +P    +L + L 
Sbjct: 41  LPANIGDIEVLN---LGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLT 97

Query: 199 ALILSDNQLESLPAS-ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
            L +S N+L  L A  +S L+ L+ L L +N+L  LP ++  L  L E    L +  N+L
Sbjct: 98  ELDVSHNRLTVLGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEE----LDVSFNRL 153

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
             LP     L  L  L +  N L
Sbjct: 154 AHLPDSFSCLNHLRTLDVDHNQL 176


>gi|403307215|ref|XP_003944101.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Saimiri boliviensis boliviensis]
          Length = 1052

 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 118/241 (48%), Gaps = 26/241 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA------ 115
           L HN L   P       +L  LD+S NR+ HLP +++    L TL   +N LTA      
Sbjct: 142 LSHNQLPALPAQLGVLAHLEELDVSFNRLAHLPDSLSCLSRLRTLDVDHNQLTAFPRQLL 201

Query: 116 ---------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                            LP+D++ L  LK+  LSG +L   P    ++ +L+ L L NN 
Sbjct: 202 QLAALEELDVSSNRLRGLPEDINALHALKILWLSGAELGTLPAGFCELASLESLMLDNNG 261

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P + ++L +L +L+L  N   + P     L  LE L LS NQL S+P+ IS L  L
Sbjct: 262 LQALPAQFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRL 321

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DNPL
Sbjct: 322 LTLWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDNFGQLSRVGLWKIKDNPL 377

Query: 281 V 281
           +
Sbjct: 378 I 378



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 115/250 (46%), Gaps = 31/250 (12%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +I+ L L +N L   PD   S   +LR L L  NR   LP A+      L+ L   +N L
Sbjct: 64  DIEALNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 123

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA    + +S L+ L+  NLS NQL   P Q+  +  L+ L +  N L H+P  ++ L +
Sbjct: 124 TALGA-EVVSALRELRKLNLSHNQLPALPAQLGVLAHLEELDVSFNRLAHLPDSLSCLSR 182

Query: 174 LHVLSLGGNSLT-----------------------DIPDTFGDLYQLEALILSDNQLESL 210
           L  L +  N LT                        +P+    L+ L+ L LS  +L +L
Sbjct: 183 LRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDINALHALKILWLSGAELGTL 242

Query: 211 PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
           PA    L  L+SL+L NN L+ LP +   L    ++LK L L +N     P  ++ L  L
Sbjct: 243 PAGFCELASLESLMLDNNGLQALPAQFSRL----QRLKMLNLSSNLFEEFPAALLPLAGL 298

Query: 271 SELSLRDNPL 280
            EL L  N L
Sbjct: 299 EELYLSRNQL 308



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/205 (32%), Positives = 95/205 (46%), Gaps = 26/205 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF--------------- 101
            + TL + HN L+ FP    +   L  LD+S+NR+  LP+ I                  
Sbjct: 182 RLRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDINALHALKILWLSGAELGT 241

Query: 102 ---------PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                     L +L+  NN L A  LP   S L+ LK+ NLS N  E+FP  +L +  L+
Sbjct: 242 LPAGFCELASLESLMLDNNGLQA--LPAQFSRLQRLKMLNLSSNLFEEFPAALLPLAGLE 299

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYL  N L  VP  I+ L +L  L L  N +  +PD+  +L  LE L+L  NQ+  LP 
Sbjct: 300 ELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPD 359

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEI 237
           +   L  +    + +N L   P E+
Sbjct: 360 NFGQLSRVGLWKIKDNPLIQPPYEV 384



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 91/186 (48%), Gaps = 18/186 (9%)

Query: 79  TNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           +NLR L LS  R    P A ++ PL +      +L A        NL +++  NL  N L
Sbjct: 27  SNLRQLTLSAARAC--PGAESD-PLESPAPAQLVLPA--------NLGDIEALNLGNNGL 75

Query: 139 EQFPIQILD-IPTLKYLYLGNNSLNHVPREINKLC-KLHVLSLGGNSLTDI-PDTFGDLY 195
           E+ P  +   + +L+ L L  N    +P  + +L   L  L +  N LT +  +    L 
Sbjct: 76  EEVPDGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLTALGAEVVSALR 135

Query: 196 QLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNN 255
           +L  L LS NQL +LPA +  L  L+ L +  N+L  LP    +L CLS +L++L + +N
Sbjct: 136 ELRKLNLSHNQLPALPAQLGVLAHLEELDVSFNRLAHLPD---SLSCLS-RLRTLDVDHN 191

Query: 256 KLRTLP 261
           +L   P
Sbjct: 192 QLTAFP 197


>gi|291396405|ref|XP_002714440.1| PREDICTED: leucine rich repeat containing 1 [Oryctolagus cuniculus]
          Length = 614

 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 118/209 (56%), Gaps = 7/209 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I   F L  L    N L+ 
Sbjct: 242 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALFHLKDLWLDGNQLS- 300

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 301 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEIIPDGIGKLKKLS 359

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+  G+   L  L+L++N+L +LP SI  LK L +L    NKL +LP 
Sbjct: 360 ILKVDQNRLTQLPEAVGECESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPK 419

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           EI    C S  L    + +N+L  +P E+
Sbjct: 420 EIG--GCCS--LTVFCVRDNRLTRIPAEV 444



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 104/210 (49%), Gaps = 20/210 (9%)

Query: 91  ITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPT 150
           +T LP++       T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  
Sbjct: 207 MTELPESFPELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRR 265

Query: 151 LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           L+ L LGNN + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE L
Sbjct: 266 LEELDLGNNEIYNLPESIGALFHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERL 325

Query: 211 PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLL 251
           P  IS L  L  L++  N L  +P  I  LK LS                   E L  L+
Sbjct: 326 PEEISGLTSLTDLVISQNLLEIIPDGIGKLKKLSILKVDQNRLTQLPEAVGECESLTELV 385

Query: 252 LHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L  N+L TLP  I  LK LS L+   N LV
Sbjct: 386 LTENRLLTLPKSIGKLKKLSNLNADRNKLV 415



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/220 (30%), Positives = 97/220 (44%), Gaps = 33/220 (15%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN+    PE+I  L       L  N LS  P       NL  LD+S NR+  LP+ I+
Sbjct: 271 LGNNEIYNLPESIGALFHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS 330

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL-- 156
               L+ L+   NLL  E +P  +  LK L +  +  N+L Q P  + +  +L  L L  
Sbjct: 331 GLTSLTDLVISQNLL--EIIPDGIGKLKKLSILKVDQNRLTQLPEAVGECESLTELVLTE 388

Query: 157 ---------------------GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLY 195
                                  N L  +P+EI   C L V  +  N LT IP       
Sbjct: 389 NRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPAEVSQAT 448

Query: 196 QLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L  L ++ N+L  LP S++ LK LK+L L +N+ + L T
Sbjct: 449 ELHVLDVAGNRLLHLPLSLTTLK-LKALWLSDNQSQPLLT 487



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 55/144 (38%), Positives = 73/144 (50%), Gaps = 8/144 (5%)

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
           E FP    ++  L  L + + SL  +P  I  L  L  L L  N LT +PD+   L +LE
Sbjct: 212 ESFP----ELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLE 267

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L L +N++ +LP SI  L  LK L L  N+L  LP EI  LK     L  L +  N+L 
Sbjct: 268 ELDLGNNEIYNLPESIGALFHLKDLWLDGNQLSELPQEIGNLK----NLLCLDVSENRLE 323

Query: 259 TLPTEIITLKCLSELSLRDNPLVI 282
            LP EI  L  L++L +  N L I
Sbjct: 324 RLPEEISGLTSLTDLVISQNLLEI 347



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 100/237 (42%), Gaps = 50/237 (21%)

Query: 77  KFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGN 136
           +   LR L LS+N I  LP  I NF           L    + +++S +K +     SG 
Sbjct: 103 QLVKLRKLGLSDNEIQRLPPEIANF---------MQLVELDVSRNVSAVKAIFCVRSSGA 153

Query: 137 QLE--------------------QFPIQILDIPTLKYLYLG-----------NNS--LNH 163
                                  ++PI  L     K L LG           +NS  +  
Sbjct: 154 AAARLVVCPLVKRTALMQPRAGYEYPIHGLQ----KSLCLGFIVNVQPDLIYSNSEMMTE 209

Query: 164 VPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL 223
           +P    +L  L  LS+   SL  +P+  G+LY L +L L +N L  LP S++ L+ L+ L
Sbjct: 210 LPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEEL 269

Query: 224 LLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            L NN++  LP  I  L      LK L L  N+L  LP EI  LK L  L + +N L
Sbjct: 270 DLGNNEIYNLPESIGALF----HLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRL 322


>gi|418678653|ref|ZP_13239927.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400321843|gb|EJO69703.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 263

 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 89/202 (44%), Positives = 118/202 (58%), Gaps = 7/202 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           ++R LDLS  ++  LP+ I     L TL  RNNLLT  +LPK++  L+NL+  NL  +QL
Sbjct: 45  DVRVLDLSEQKLKTLPKEIGQLQNLQTLDLRNNLLT--TLPKEIERLQNLQTLNLINSQL 102

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
              P +I  +  L+ L L  N L  +P+EI +L KL  LSL GN L  +P+  G L  L+
Sbjct: 103 MTLPKEIGQLQNLQQLELDYNRLYTLPKEIGRLKKLRTLSLWGNRLKTLPNEIGQLQNLQ 162

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L L +NQL++LP  I  LK L+ L L  N+L+TLP EI  L+ L E    L L NN L 
Sbjct: 163 TLNLWNNQLKTLPNEIGQLKNLQRLHLSYNQLKTLPNEIEQLQNLQE----LDLRNNLLT 218

Query: 259 TLPTEIITLKCLSELSLRDNPL 280
            LP  I  LK L +L LR+N L
Sbjct: 219 ALPKGIGQLKNLQKLDLRNNEL 240



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 65/163 (39%), Positives = 93/163 (57%), Gaps = 4/163 (2%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           L K + N  +++V +LS  +L+  P +I  +  L+ L L NN L  +P+EI +L  L  L
Sbjct: 36  LTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQTLDLRNNLLTTLPKEIERLQNLQTL 95

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
           +L  + L  +P   G L  L+ L L  N+L +LP  I  LK L++L L  N+L+TLP EI
Sbjct: 96  NLINSQLMTLPKEIGQLQNLQQLELDYNRLYTLPKEIGRLKKLRTLSLWGNRLKTLPNEI 155

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             L    + L++L L NN+L+TLP EI  LK L  L L  N L
Sbjct: 156 GQL----QNLQTLNLWNNQLKTLPNEIGQLKNLQRLHLSYNQL 194



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 33/210 (15%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           + ++ LD S   L  +TL  +I  L         +N+ TL L +N L+  P    +  NL
Sbjct: 44  LDVRVLDLSEQKL--KTLPKEIGQL---------QNLQTLDLRNNLLTTLPKEIERLQNL 92

Query: 82  RSLDLSNNRITHLPQAITN--------------FPLSTLIARNNLLTA--------ESLP 119
           ++L+L N+++  LP+ I                + L   I R   L          ++LP
Sbjct: 93  QTLNLINSQLMTLPKEIGQLQNLQQLELDYNRLYTLPKEIGRLKKLRTLSLWGNRLKTLP 152

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            ++  L+NL+  NL  NQL+  P +I  +  L+ L+L  N L  +P EI +L  L  L L
Sbjct: 153 NEIGQLQNLQTLNLWNNQLKTLPNEIGQLKNLQRLHLSYNQLKTLPNEIEQLQNLQELDL 212

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLES 209
             N LT +P   G L  L+ L L +N+L S
Sbjct: 213 RNNLLTALPKGIGQLKNLQKLDLRNNELSS 242



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 4/80 (5%)

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           TD+     +   +  L LS+ +L++LP  I  L+ L++L L NN L TLP EI  L    
Sbjct: 34  TDLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQTLDLRNNLLTTLPKEIERL---- 89

Query: 245 EKLKSLLLHNNKLRTLPTEI 264
           + L++L L N++L TLP EI
Sbjct: 90  QNLQTLNLINSQLMTLPKEI 109


>gi|398334690|ref|ZP_10519395.1| lipoprotein [Leptospira kmetyi serovar Malaysia str. Bejo-Iso9]
          Length = 345

 Score =  114 bits (285), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 108/319 (33%), Positives = 155/319 (48%), Gaps = 34/319 (10%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           + ++ L+ S+  + S  L + IE         + +N+ +L L+ NNL   P    K  NL
Sbjct: 58  LKVRELNLSWQEITS--LPSDIE---------RFQNLKSLNLFKNNLESLPVEIGKLKNL 106

Query: 82  RSLDLSNNRITHLPQAIT--NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
           +SL+L  N +   P+ I   N  L    + N L   E LP ++  LKNL   NL GN+L 
Sbjct: 107 KSLNLGLNPLITFPKEIEQLNDLLELDFSGNKL---EVLPPEILQLKNLTDLNLLGNELT 163

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
             PI+I  +  L+ L L +N L  +PREI +L  L  LS+  N L  IP+  G L  L+ 
Sbjct: 164 ALPIEIGVLQNLQKLNLYSNELIRLPREIGQLQNLQELSIHYNKLVSIPEEIGQLKSLKI 223

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRT 259
           L LS NQ  SLP  I  L  LK L L NN     P EI+ LK L E    L L  N L T
Sbjct: 224 LNLSQNQFTSLPEEIRELHNLKELDLSNNPQLIFPKEIMFLKNLQE----LRLMKNNLNT 279

Query: 260 LPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNL 319
            P EI+ L+ L  L L  N  +I F +++            ++L++  +D+S   +P+  
Sbjct: 280 FPIEILQLRNLRSLGLGGNN-IISFPNEIK---------QLQSLRILSLDHSVIPIPK-- 327

Query: 320 VQYLESAHHCVNPKCKGVF 338
            +  E     + P CK +F
Sbjct: 328 -KEKEKIQRLL-PNCKVIF 344


>gi|354471549|ref|XP_003498004.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           homolog [Cricetulus griseus]
          Length = 1036

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 117/241 (48%), Gaps = 26/241 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA------ 115
           L HN L   P       +L  LD+S NR+ HLP + +    L TL   +N LT       
Sbjct: 126 LSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNHLRTLDVDHNQLTTFPRQLL 185

Query: 116 ---------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                            LP+D+S L+ LK+  LSG +L   P    ++ +L+ L L NN 
Sbjct: 186 QLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDNNG 245

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P E ++L +L +L+L  N   + P     L  LE L LS NQL S+P+ I+ L  L
Sbjct: 246 LQALPPEFSRLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRL 305

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DNPL
Sbjct: 306 LTLWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDNFGQLSRVGLWKIKDNPL 361

Query: 281 V 281
           +
Sbjct: 362 I 362



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 110/225 (48%), Gaps = 8/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +I+ L L +N L   P+   S   +LR L L  NR   LP A+      L+ L   +N L
Sbjct: 48  DIEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 107

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T     + +S L+ L+  NLS NQL   P Q+  +  L+ L +  N L H+P   + L  
Sbjct: 108 TVLGA-EVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSFSCLNH 166

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L +  N LT  P     L  LE L +S N+L  LP  IS L+ LK L L   +L TL
Sbjct: 167 LRTLDVDHNQLTTFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 226

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P+      C    L+SL+L NN L+ LP E   L+ L  L+L  N
Sbjct: 227 PSGF----CELASLESLMLDNNGLQALPPEFSRLQRLKMLNLSSN 267



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 85/173 (49%), Gaps = 3/173 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L   P++ S    L+ L LS   +  LP        L +L+  NN L A  LP + S 
Sbjct: 198 NRLRGLPEDISALRALKILWLSGAELGTLPSGFCELASLESLMLDNNGLQA--LPPEFSR 255

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ LK+ NLS N  E+FP  +L +  L+ LYL  N L  VP  I  L +L  L L  N +
Sbjct: 256 LQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLIAGLGRLLTLWLDNNRI 315

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
             +PD+  +L  LE L+L  NQ+  LP +   L  +    + +N L   P E+
Sbjct: 316 RYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEV 368



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 59/110 (53%), Gaps = 5/110 (4%)

Query: 174 LHVLSLGGNSLTDIPDTFGD-LYQLEALILSDNQLESLPASISNLKM-LKSLLLHNNKLR 231
           + VL+LG N L D+P+  G  L  L  L+L  N+   LP +++ L   L  L + +N+L 
Sbjct: 49  IEVLNLGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRLT 108

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L  E+++   L E L+ L L +N+L  LP ++  L  L EL +  N L 
Sbjct: 109 VLGAEVVS--ALRE-LRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLA 155



 Score = 45.1 bits (105), Expect = 0.067,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 65/143 (45%), Gaps = 10/143 (6%)

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREIN-KLCKLHVLSLGGNSLTDIPDTFGDL-YQLE 198
            P  I DI  L    LGNN L  VP  +   L  L VL L  N    +P    +L + L 
Sbjct: 42  LPANIGDIEVLN---LGNNGLEDVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLT 98

Query: 199 ALILSDNQLESLPAS-ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
            L +S N+L  L A  +S L+ L+ L L +N+L  LP ++  L  L E    L +  N+L
Sbjct: 99  ELDVSHNRLTVLGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEE----LDVSFNRL 154

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
             LP     L  L  L +  N L
Sbjct: 155 AHLPDSFSCLNHLRTLDVDHNQL 177


>gi|260788694|ref|XP_002589384.1| hypothetical protein BRAFLDRAFT_77826 [Branchiostoma floridae]
 gi|229274561|gb|EEN45395.1| hypothetical protein BRAFLDRAFT_77826 [Branchiostoma floridae]
          Length = 936

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 121/223 (54%), Gaps = 4/223 (1%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L + +NNLS FP    K   LR L +++N++T +P  + + P L  L   NN L+ 
Sbjct: 221 NLEVLNVDNNNLSAFPPGVEKLQKLRGLGINDNQLTEVPSGVCSLPNLEALGVGNNKLS- 279

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            + P  +  L+ L+V ++ GNQL + P  +  +P L+ L++G N L+  P  + KL KL 
Sbjct: 280 -TFPPGVEKLQKLRVLHIYGNQLTEVPSGVCSLPNLELLHVGKNKLSTFPPGVEKLQKLR 338

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L +  N LT++P     L  LE L +S+N +  LP  ++ L  LK+L +H  +    P 
Sbjct: 339 ELHINDNQLTEVPSGVCSLPNLELLNVSNNPIRRLPNDVTRLTRLKNLDVHCCQFDEFPR 398

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           +++ LK L EKL +      K   +P E+  L+ L  L+L +N
Sbjct: 399 QVLQLKTL-EKLYAGQSVGRKFDMVPDEVGNLQHLWYLALENN 440



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 117/227 (51%), Gaps = 11/227 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           +++ L   +N LS FP    K   LR L +  N++T +P  +   P L  L   NN L+ 
Sbjct: 129 SLEVLDASNNKLSTFPPGVEKLQKLRELGIDGNQLTEVPPGVFLLPNLEVLDVSNNKLS- 187

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            + P  +  L+ L+   ++ NQL + P  +  +P L+ L + NN+L+  P  + KL KL 
Sbjct: 188 -TFPPGVKKLQKLRELRINDNQLTEVPPGVCSLPNLEVLNVDNNNLSAFPPGVEKLQKLR 246

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L +  N LT++P     L  LEAL + +N+L + P  +  L+ L+ L ++ N+L  +P+
Sbjct: 247 GLGINDNQLTEVPSGVCSLPNLEALGVGNNKLSTFPPGVEKLQKLRVLHIYGNQLTEVPS 306

Query: 236 EIITLKCLSEKLKSLLLH--NNKLRTLPTEIITLKCLSELSLRDNPL 280
            + +L  L       LLH   NKL T P  +  L+ L EL + DN L
Sbjct: 307 GVCSLPNLE------LLHVGKNKLSTFPPGVEKLQKLRELHINDNQL 347



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/256 (30%), Positives = 127/256 (49%), Gaps = 16/256 (6%)

Query: 34  LDSETLATQIEL-LPNNDYNKKPENI------DTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           L  +T+  +++L L N D    PE +      + L + +N LS  P+   +   L  LD 
Sbjct: 7   LQPQTVNGRLKLDLSNQDLTSIPEEVFDITDLEFLDVSNNKLSSIPEAIGRLQKLYRLDA 66

Query: 87  SNNRITHLPQAITNFPLST--LIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQ 144
             N +  LPQAI +    T   + RN L    +LP  +  L+ L + ++  NQL + P  
Sbjct: 67  DGNMLKSLPQAIGSLQKLTHLYVYRNKL---ANLPPGIEKLQKLTLLSIFDNQLTKVPPG 123

Query: 145 ILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD 204
           +  +P+L+ L   NN L+  P  + KL KL  L + GN LT++P     L  LE L +S+
Sbjct: 124 VCMLPSLEVLDASNNKLSTFPPGVEKLQKLRELGIDGNQLTEVPPGVFLLPNLEVLDVSN 183

Query: 205 NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           N+L + P  +  L+ L+ L +++N+L  +P  + +L      L+ L + NN L   P  +
Sbjct: 184 NKLSTFPPGVKKLQKLRELRINDNQLTEVPPGVCSLP----NLEVLNVDNNNLSAFPPGV 239

Query: 265 ITLKCLSELSLRDNPL 280
             L+ L  L + DN L
Sbjct: 240 EKLQKLRGLGINDNQL 255



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 73/248 (29%), Positives = 116/248 (46%), Gaps = 35/248 (14%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L +  N LS FP    K   LR L +++N++T +P  + + P L  L   NN +  
Sbjct: 313 NLELLHVGKNKLSTFPPGVEKLQKLRELHINDNQLTEVPSGVCSLPNLELLNVSNNPI-- 370

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP D++ L  LK  ++   Q ++FP Q+L + TL+ LY G +                
Sbjct: 371 RRLPNDVTRLTRLKNLDVHCCQFDEFPRQVLQLKTLEKLYAGQSV--------------- 415

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
                G     +PD  G+L  L  L L +N L +LP+++S L  L+ + L NNK  T P 
Sbjct: 416 -----GRKFDMVPDEVGNLQHLWYLALENNLLRTLPSTMSRLHNLREVHLWNNKFDTFP- 469

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
           E++   C    ++ L + NN +  LPT +     L +L +  NPL        TY P  +
Sbjct: 470 EVL---CELPAMEKLDISNNNITRLPTALHRADKLKDLDVSGNPL--------TYPPQDV 518

Query: 296 LELASRTL 303
            E  +  +
Sbjct: 519 CEQGTGAI 526



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 76/291 (26%), Positives = 126/291 (43%), Gaps = 47/291 (16%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNL 112
           +K + +  L +  N L+  P       NL  L++SNN I  LP  +T             
Sbjct: 332 EKLQKLRELHINDNQLTEVPSGVCSLPNLELLNVSNNPIRRLPNDVTR------------ 379

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG---NNSLNHVPREIN 169
                    ++ LKNL V      Q ++FP Q+L + TL+ LY G       + VP E+ 
Sbjct: 380 ---------LTRLKNLDVHCC---QFDEFPRQVLQLKTLEKLYAGQSVGRKFDMVPDEVG 427

Query: 170 KLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
            L  L  L+L  N L  +P T   L+ L  + L +N+ ++ P  +  L  ++ L + NN 
Sbjct: 428 NLQHLWYLALENNLLRTLPSTMSRLHNLREVHLWNNKFDTFPEVLCELPAMEKLDISNNN 487

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI------ITLKCLSELSLRDNPLVIR 283
           +  LPT +      ++KLK L +  N L   P ++        +  L + + +D  ++  
Sbjct: 488 ITRLPTALHR----ADKLKDLDVSGNPLTYPPQDVCEQGTGAIMAFLKQEAEKDERILRA 543

Query: 284 F------VSDMTYKP-PSLLELASR---TLKVHEIDYSQEHLPQNLVQYLE 324
           F      +S   +KP    L L++R    +K    D   + + Q LVQ+ E
Sbjct: 544 FNRLSARMSQTQWKPLARSLGLSNRAVDAIKASAPDDVPDQVYQTLVQWKE 594


>gi|384485460|gb|EIE77640.1| hypothetical protein RO3G_02344 [Rhizopus delemar RA 99-880]
          Length = 513

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 121/216 (56%), Gaps = 7/216 (3%)

Query: 151 LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           L  L L NN +  +P+E+  L  L VL++  N + ++PDT   L +L+AL +S+N+L++L
Sbjct: 113 LNKLILSNNQMTELPKEVGYLKNLTVLNVSNNKINELPDTIAFLSKLKALNISENKLKTL 172

Query: 211 PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
           P+SI  L+ L  ++ +NN++ +LPTE+  L      L SL +  N LRTLP E+  L  L
Sbjct: 173 PSSIGQLQKLVIIVANNNQITSLPTELSQL----SNLVSLNVSFNPLRTLPAEVAKLPTL 228

Query: 271 SELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCV 330
            +L          +  ++ + PPSLLE  +R    HE++    +L  ++  YL SA  C 
Sbjct: 229 RKLLTEGCEFQEEYTYNLCHDPPSLLETCARIAVRHELEIPN-YLTTHIKDYLASAKKC- 286

Query: 331 NPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSS 366
              C+G +FD+ +  +++++   +  + L   LCS+
Sbjct: 287 -SYCQGPYFDSCVTRVRYIERIARNTMALEYTLCSA 321



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 57/123 (46%), Gaps = 26/123 (21%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT---------------- 99
           +N++ L+L +N ++  P       NL  L++SNN+I  LP  I                 
Sbjct: 111 DNLNKLILSNNQMTELPKEVGYLKNLTVLNVSNNKINELPDTIAFLSKLKALNISENKLK 170

Query: 100 NFP--------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
             P        L  ++A NN +T  SLP ++S L NL   N+S N L   P ++  +PTL
Sbjct: 171 TLPSSIGQLQKLVIIVANNNQIT--SLPTELSQLSNLVSLNVSFNPLRTLPAEVAKLPTL 228

Query: 152 KYL 154
           + L
Sbjct: 229 RKL 231


>gi|255088281|ref|XP_002506063.1| predicted protein [Micromonas sp. RCC299]
 gi|226521334|gb|ACO67321.1| predicted protein [Micromonas sp. RCC299]
          Length = 250

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 76/189 (40%), Positives = 101/189 (53%), Gaps = 3/189 (1%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           +++ L L +N L+  P+     T+LR L L  N++T LP  I     L  L    N LT 
Sbjct: 51  SLERLDLNNNQLTSVPEEIGLLTSLRELVLYGNQLTRLPAKIWQLTSLRKLFLDQNQLT- 109

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP  +  L++LK  +L  N L + P +I  + +LK L+L  N L  VP EI +L  L 
Sbjct: 110 -RLPAKIGQLRSLKELSLYHNGLTRLPAKIGKLTSLKTLHLSRNQLTSVPAEIRQLTSLQ 168

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            LSLGGN LT +P   G L  L  L L DN+L S+PA I  L  LK L L NNKL +LP 
Sbjct: 169 ELSLGGNLLTSVPAEIGQLTSLRVLYLFDNKLTSVPAEIEQLTSLKELWLFNNKLTSLPA 228

Query: 236 EIITLKCLS 244
            I  L+ + 
Sbjct: 229 AIRELRAMG 237



 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 79/210 (37%), Positives = 108/210 (51%), Gaps = 7/210 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L  N L+  P    + T+L  LDL+NN++T +P+ I     L  L+   N LT   LP  
Sbjct: 34  LRGNQLTSVPAEIWQLTSLERLDLNNNQLTSVPEEIGLLTSLRELVLYGNQLT--RLPAK 91

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L +L+   L  NQL + P +I  + +LK L L +N L  +P +I KL  L  L L  
Sbjct: 92  IWQLTSLRKLFLDQNQLTRLPAKIGQLRSLKELSLYHNGLTRLPAKIGKLTSLKTLHLSR 151

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N LT +P     L  L+ L L  N L S+PA I  L  L+ L L +NKL ++P EI  L 
Sbjct: 152 NQLTSVPAEIRQLTSLQELSLGGNLLTSVPAEIGQLTSLRVLYLFDNKLTSVPAEIEQLT 211

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
            L E    L L NNKL +LP  I  L+ + 
Sbjct: 212 SLKE----LWLFNNKLTSLPAAIRELRAMG 237



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/162 (41%), Positives = 86/162 (53%), Gaps = 4/162 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++P ++  L  L+  NL GNQL   P +I  + +L+ L L NN L  VP EI  L  L  
Sbjct: 18  AVPAEVWRLSALRKLNLRGNQLTSVPAEIWQLTSLERLDLNNNQLTSVPEEIGLLTSLRE 77

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L GN LT +P     L  L  L L  NQL  LPA I  L+ LK L L++N L  LP +
Sbjct: 78  LVLYGNQLTRLPAKIWQLTSLRKLFLDQNQLTRLPAKIGQLRSLKELSLYHNGLTRLPAK 137

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           I  L      LK+L L  N+L ++P EI  L  L ELSL  N
Sbjct: 138 IGKLTS----LKTLHLSRNQLTSVPAEIRQLTSLQELSLGGN 175



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/111 (38%), Positives = 59/111 (53%), Gaps = 7/111 (6%)

Query: 170 KLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           ++ +L + SLG   L  +P     L  L  L L  NQL S+PA I  L  L+ L L+NN+
Sbjct: 5   RVEELELYSLG---LCAVPAEVWRLSALRKLNLRGNQLTSVPAEIWQLTSLERLDLNNNQ 61

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L ++P EI  L  L E    L+L+ N+L  LP +I  L  L +L L  N L
Sbjct: 62  LTSVPEEIGLLTSLRE----LVLYGNQLTRLPAKIWQLTSLRKLFLDQNQL 108


>gi|417783613|ref|ZP_12431331.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409953237|gb|EKO07738.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 595

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 124/249 (49%), Gaps = 24/249 (9%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLL 113
           +N+  L L  N L+  P    +  NL+ LDL +N++   P  I     L +L ++ N L+
Sbjct: 71  KNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLI 130

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L+NL+   L  N+L  FP +I  +  L+ L+L  N L  +P+EI +L  
Sbjct: 131 I---LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKN 187

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N  T +P   G L  L+ L LSDNQL +LP  I  L+ L+ L L NN+L   
Sbjct: 188 LQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRNNRLTVF 247

Query: 234 PTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           P EI  L+ L                    + L++L L NN+L   P EI  L+ L +L 
Sbjct: 248 PKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLE 307

Query: 275 LRDNPLVIR 283
           L  NPL ++
Sbjct: 308 LLMNPLSLK 316



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/213 (38%), Positives = 116/213 (54%), Gaps = 5/213 (2%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKV 130
           FP    KF NLR L+L +   + LP+ I+       +A   L   + +P ++  L+NL+ 
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISLLKNLKYLALG-LNGLKKIPSEIGQLRNLEA 426

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NL  N+LE+ P +I  +  L+ L L  N+L   P EI +L KL  L L  N  T  P  
Sbjct: 427 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
            G L  L+ L L  NQL +L A I  L+ L+ L L++N+   LP EI  LK    KL++L
Sbjct: 487 IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLK----KLQTL 542

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
            L NN+L TLPTEI  L+ L  L L++N L ++
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLK 575



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 110/221 (49%), Gaps = 11/221 (4%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N+  L LY    S  P   S   NL+ L L  N +  +P  I     L  L    N 
Sbjct: 374 KFRNLRGLNLYDCGFSTLPKEISLLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANE 433

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L  E LPK++  L+NL+  +L  N L+ FP +I  +  L+ L L  N     P+EI KL 
Sbjct: 434 L--ERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLE 491

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L+L  N LT++    G L  L+ L L+DNQ   LP  I  LK L++L L NN+L T
Sbjct: 492 NLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTT 551

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTE----IITLKC 269
           LPTEI  L    + L+ L L NN+L     E    ++ LKC
Sbjct: 552 LPTEIGQL----QNLQWLYLQNNQLSLKEQERIRKLLPLKC 588



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 116/261 (44%), Gaps = 44/261 (16%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNN--------RITHLPQAITNFPLSTL- 106
           +N+ TL L +N L+ FP    +  NL+ L+L  N        RI  L      FP S+L 
Sbjct: 278 QNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKL------FPDSSLD 331

Query: 107 ---IARNNLLT----------------------AESLPKDMSNLKNLKVFNLSGNQLEQF 141
              +A N +                        ++S PK +   +NL+  NL        
Sbjct: 332 LREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTL 391

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P +I  +  LKYL LG N L  +P EI +L  L  L+L  N L  +P   G L  L+ L 
Sbjct: 392 PKEISLLKNLKYLALGLNGLKKIPSEIGQLRNLEALNLEANELERLPKEIGQLRNLQKLS 451

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           L  N L+  PA I  LK L+ L L  N+  T P EI  L    E L++L L  N+L  L 
Sbjct: 452 LHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKL----ENLQTLNLQRNQLTNLT 507

Query: 262 TEIITLKCLSELSLRDNPLVI 282
            EI  L+ L EL L DN   +
Sbjct: 508 AEIGQLQNLQELDLNDNQFTV 528



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 89/165 (53%), Gaps = 4/165 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLSG +L   P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 36  TYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L   P    +L +LE+L LS+N+L  LP  I  L+ L+ L L+ NKL T 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P EI  L    + L+ L L  N+L  LP EI  LK L  L L+DN
Sbjct: 156 PKEIGQL----QNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDN 196



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 4/111 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+     +   +  L LS  +L +LP  I  LK L+ L L  N L 
Sbjct: 25  CEIQAEEVEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLT 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           TLP EI  L    E L+ L L +N+L T P  I+ L+ L  L L +N L+I
Sbjct: 85  TLPKEIGQL----ENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLII 131


>gi|220907470|ref|YP_002482781.1| hypothetical protein Cyan7425_2057 [Cyanothece sp. PCC 7425]
 gi|219864081|gb|ACL44420.1| leucine-rich repeat protein [Cyanothece sp. PCC 7425]
          Length = 482

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 87/240 (36%), Positives = 126/240 (52%), Gaps = 13/240 (5%)

Query: 48  NNDYNKKPENID------TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           NN  N  P++I        L + +N LS  P +      LR +DLS+N++T+LP++I + 
Sbjct: 225 NNQLNSLPKSIGHLKQLKELCVCNNQLSNLPGSIGSLRRLRKIDLSDNQLTYLPESIGSL 284

Query: 102 -PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
             L  L    N L  + LP+ + +L  L   +LS NQL + P  I  +  L+ L L +N 
Sbjct: 285 TQLYWLDLSGNQL--KHLPESIGSLTQLLGLSLSNNQLTELPTAICSLTDLESLRLSDNQ 342

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P  I+ L +L  L+L  N LT++P   G L +LE   LS+NQL  LP SI  L  L
Sbjct: 343 LTEIPESISDLTELEWLNLSRNQLTELPAAIGLLTELETFYLSENQLTELPESIGALIQL 402

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             + L +N+L  LP    +L     +L+ L L NN+L  LP  I +L  L E+ L  NPL
Sbjct: 403 DWIFLDDNQLIKLPESFSSLI----QLRRLYLENNQLTELPVAIGSLVQLEEIKLNGNPL 458



 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 89/233 (38%), Positives = 128/233 (54%), Gaps = 13/233 (5%)

Query: 55  PENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLI 107
           PE+I +L       + HN L+  P++     NL+ L L NN++T LP+AI +   L  L 
Sbjct: 2   PESIGSLTQLQKLGVSHNQLTQLPESICLLINLQELSLENNQLTELPEAIGSLIQLQELN 61

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE 167
             +NLL    LPK +S+L  LK  NL  NQL   P +I  +  L+ L+L +N L H+P  
Sbjct: 62  LASNLLI--KLPKTISSLTQLKELNLRENQLADVPDEIGFLTQLQELWLSSNQLTHLPEM 119

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           I  L +L  L L  N LTD+P++  +L +L  L L  N L  LP +I +L +L  L L  
Sbjct: 120 IGSLTQLQELFLYSNQLTDLPESLANLTRLNWLSLETNHLTVLPETIGSLTLLNELDLKE 179

Query: 228 NKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           N+L +LP  + +L     +LK L L +N+L  LP  I +L  L+EL L +N L
Sbjct: 180 NQLTSLPESVGSLI----RLKKLDLADNQLTHLPESIGSLSRLNELCLCNNQL 228



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 88/243 (36%), Positives = 126/243 (51%), Gaps = 13/243 (5%)

Query: 46  LPNNDYNKKPENIDTLLLY------HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L  N     PE I +L L        N L+  P++      L+ LDL++N++THLP++I 
Sbjct: 154 LETNHLTVLPETIGSLTLLNELDLKENQLTSLPESVGSLIRLKKLDLADNQLTHLPESIG 213

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
           +   L+ L   NN L   SLPK + +LK LK   +  NQL   P  I  +  L+ + L +
Sbjct: 214 SLSRLNELCLCNNQLN--SLPKSIGHLKQLKELCVCNNQLSNLPGSIGSLRRLRKIDLSD 271

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L ++P  I  L +L+ L L GN L  +P++ G L QL  L LS+NQL  LP +I +L 
Sbjct: 272 NQLTYLPESIGSLTQLYWLDLSGNQLKHLPESIGSLTQLLGLSLSNNQLTELPTAICSLT 331

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+SL L +N+L  +P  I  L     +L+ L L  N+L  LP  I  L  L    L +N
Sbjct: 332 DLESLRLSDNQLTEIPESISDLT----ELEWLNLSRNQLTELPAAIGLLTELETFYLSEN 387

Query: 279 PLV 281
            L 
Sbjct: 388 QLT 390



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 83/219 (37%), Positives = 115/219 (52%), Gaps = 7/219 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L  N L+  PD     T L+ L LS+N++THLP+ I +   L  L   +N LT   LP+ 
Sbjct: 85  LRENQLADVPDEIGFLTQLQELWLSSNQLTHLPEMIGSLTQLQELFLYSNQLT--DLPES 142

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           ++NL  L   +L  N L   P  I  +  L  L L  N L  +P  +  L +L  L L  
Sbjct: 143 LANLTRLNWLSLETNHLTVLPETIGSLTLLNELDLKENQLTSLPESVGSLIRLKKLDLAD 202

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N LT +P++ G L +L  L L +NQL SLP SI +LK LK L + NN+L  LP  I +L+
Sbjct: 203 NQLTHLPESIGSLSRLNELCLCNNQLNSLPKSIGHLKQLKELCVCNNQLSNLPGSIGSLR 262

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
               +L+ + L +N+L  LP  I +L  L  L L  N L
Sbjct: 263 ----RLRKIDLSDNQLTYLPESIGSLTQLYWLDLSGNQL 297



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/212 (38%), Positives = 111/212 (52%), Gaps = 7/212 (3%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLK 129
            P++    T L+ L +S+N++T LP++I     L  L   NN LT   LP+ + +L  L+
Sbjct: 1   MPESIGSLTQLQKLGVSHNQLTQLPESICLLINLQELSLENNQLT--ELPEAIGSLIQLQ 58

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
             NL+ N L + P  I  +  LK L L  N L  VP EI  L +L  L L  N LT +P+
Sbjct: 59  ELNLASNLLIKLPKTISSLTQLKELNLRENQLADVPDEIGFLTQLQELWLSSNQLTHLPE 118

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
             G L QL+ L L  NQL  LP S++NL  L  L L  N L  LP  I +L  L+E    
Sbjct: 119 MIGSLTQLQELFLYSNQLTDLPESLANLTRLNWLSLETNHLTVLPETIGSLTLLNE---- 174

Query: 250 LLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L L  N+L +LP  + +L  L +L L DN L 
Sbjct: 175 LDLKENQLTSLPESVGSLIRLKKLDLADNQLT 206



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 69/194 (35%), Positives = 100/194 (51%), Gaps = 9/194 (4%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N     PE+I +L       L  N L   P++    T L  L LSNN++T LP AI 
Sbjct: 269 LSDNQLTYLPESIGSLTQLYWLDLSGNQLKHLPESIGSLTQLLGLSLSNNQLTELPTAIC 328

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
           +   L +L   +N LT   +P+ +S+L  L+  NLS NQL + P  I  +  L+  YL  
Sbjct: 329 SLTDLESLRLSDNQLT--EIPESISDLTELEWLNLSRNQLTELPAAIGLLTELETFYLSE 386

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P  I  L +L  + L  N L  +P++F  L QL  L L +NQL  LP +I +L 
Sbjct: 387 NQLTELPESIGALIQLDWIFLDDNQLIKLPESFSSLIQLRRLYLENNQLTELPVAIGSLV 446

Query: 219 MLKSLLLHNNKLRT 232
            L+ + L+ N L +
Sbjct: 447 QLEEIKLNGNPLNS 460



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 103/225 (45%), Gaps = 36/225 (16%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           +P+ + +L  L+   +S NQL Q P  I  +  L+ L L NN L  +P  I  L +L  L
Sbjct: 1   MPESIGSLTQLQKLGVSHNQLTQLPESICLLINLQELSLENNQLTELPEAIGSLIQLQEL 60

Query: 178 SLGG-----------------------NSLTDIPDTFGDLYQLEALILSDNQLESLPASI 214
           +L                         N L D+PD  G L QL+ L LS NQL  LP  I
Sbjct: 61  NLASNLLIKLPKTISSLTQLKELNLRENQLADVPDEIGFLTQLQELWLSSNQLTHLPEMI 120

Query: 215 SNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
            +L  L+ L L++N+L  LP  +  L     +L  L L  N L  LP  I +L  L+EL 
Sbjct: 121 GSLTQLQELFLYSNQLTDLPESLANLT----RLNWLSLETNHLTVLPETIGSLTLLNELD 176

Query: 275 LRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNL 319
           L++N         +T  P S+  L  R  K+   D    HLP+++
Sbjct: 177 LKEN--------QLTSLPESVGSLI-RLKKLDLADNQLTHLPESI 212



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 92/177 (51%), Gaps = 11/177 (6%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L  N     PE+I +L       L +N L+  P      T+L SL LS+N++T +P++I+
Sbjct: 292 LSGNQLKHLPESIGSLTQLLGLSLSNNQLTELPTAICSLTDLESLRLSDNQLTEIPESIS 351

Query: 100 NF-PLSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           +   L  L ++RN L     LP  +  L  L+ F LS NQL + P  I  +  L +++L 
Sbjct: 352 DLTELEWLNLSRNQL---TELPAAIGLLTELETFYLSENQLTELPESIGALIQLDWIFLD 408

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASI 214
           +N L  +P   + L +L  L L  N LT++P   G L QLE + L+ N L S  A++
Sbjct: 409 DNQLIKLPESFSSLIQLRRLYLENNQLTELPVAIGSLVQLEEIKLNGNPLNSDLATV 465


>gi|418709217|ref|ZP_13270011.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770553|gb|EKR45772.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 412

 Score =  114 bits (285), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 91/226 (40%), Positives = 130/226 (57%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+++L L HN L+  P    +  NL SL L +N++  LP+ I     L  L  RNN LT
Sbjct: 173 QNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLT 232

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+   L+ N+L   P +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 233 --TLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNL 290

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L GN L  +P+  G L +L+ L L +NQL  LP  +  L+ L+SL L +N+L  LP
Sbjct: 291 QELDLDGNQLITLPENIGQLQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNALP 350

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L    +KL++L L  N+L TLP EI  LK L +L L +NPL
Sbjct: 351 KEIGKL----QKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPL 392



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 116/231 (50%), Gaps = 22/231 (9%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLK 129
            P    K  NL+ L LS N++  LP+ I     L  L    N LTA  +PK++  L+NL+
Sbjct: 73  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTA--IPKEIGQLQNLQ 130

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
             NL+ NQL   P  I  +  L+ LYLG+N  N + +EI +L  L  L L  N L  +P 
Sbjct: 131 ELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPK 190

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS----- 244
             G L  LE+L L  NQL  LP  I  L+ L+ L L NN+L TLP EI  L+ L      
Sbjct: 191 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 250

Query: 245 --------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                         + L+ L L+ N+L TLP EI  L+ L EL L  N L+
Sbjct: 251 KNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLI 301



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 108/219 (49%), Gaps = 35/219 (15%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-------------- 102
           N+++L L HN L+  P    +  NL+ L L NN++T LP+ I                  
Sbjct: 197 NLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTT 256

Query: 103 ----------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                     L  L    N LT  +LPK++  L+NL+  +L GNQL   P  I  +  L+
Sbjct: 257 LPKEIGQLQNLQKLKLYENQLT--TLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQ 314

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYLGNN LN +P ++ +L  L  L L  N L  +P   G L +L+ L L  NQL +LP 
Sbjct: 315 TLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPE 374

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLL 251
            I  LK LK L LHNN    LP+E I      E+++ LL
Sbjct: 375 EIKQLKNLKKLYLHNN---PLPSEKI------ERIRKLL 404



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 124/226 (54%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L+  P    +  NL+ L+L++N++  LP+ I     L TL   +N   
Sbjct: 104 QNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFN 163

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             S+ K++  L+NL+   L  NQL   P +I  +  L+ L L +N LN +P+EI +L  L
Sbjct: 164 --SILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNL 221

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  N LT +P   G L  L+ L+L+ N+L +LP  I  L+ L+ L L+ N+L TLP
Sbjct: 222 QILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLP 281

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L+ L E    L L  N+L TLP  I  L+ L  L L +N L
Sbjct: 282 KEIGQLQNLQE----LDLDGNQLITLPENIGQLQRLQTLYLGNNQL 323



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 105/217 (48%), Gaps = 31/217 (14%)

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMS 123
           Y+ N++    N     N+R L+LS +++T LP  I       L+  ++     +LPK++ 
Sbjct: 23  YYRNITEVLKNPQ---NVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLI-ALPKEIG 78

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            L+NL+  +LS NQL                         +P EI +L  L  L L  N 
Sbjct: 79  KLQNLQQLHLSKNQLM-----------------------ALPEEIGQLQNLQKLKLYENQ 115

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT IP   G L  L+ L L+ NQL +LP  I  L+ L++L L +N+  ++  EI  L   
Sbjct: 116 LTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQL--- 172

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            + L+SL L +N+L  LP EI  L+ L  L L  N L
Sbjct: 173 -QNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQL 208


>gi|417760348|ref|ZP_12408374.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417774427|ref|ZP_12422292.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418675361|ref|ZP_13236652.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409943915|gb|EKN89506.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410575760|gb|EKQ38777.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410577523|gb|EKQ45393.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 412

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/226 (40%), Positives = 130/226 (57%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+++L L HN L+  P    +  NL SL L +N++  LP+ I     L  L  RNN LT
Sbjct: 173 QNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLT 232

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+   L+ N+L   P +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 233 --TLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNL 290

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L GN L  +P+  G L +L+ L L +NQL  LP  +  L+ L+SL L +N+L  LP
Sbjct: 291 QELDLDGNQLITLPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALP 350

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L    +KL++L L  N+L TLP EI  LK L +L L +NPL
Sbjct: 351 KEIGKL----QKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPL 392



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 116/231 (50%), Gaps = 22/231 (9%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLK 129
            P    K  NL+ L LS N++  LP+ I     L  L    N LTA  +PK++  L+NL+
Sbjct: 73  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTA--IPKEIGQLQNLQ 130

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
             NL+ NQL   P  I  +  L+ LYLG+N  N + +EI +L  L  L L  N L  +P 
Sbjct: 131 ELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPK 190

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS----- 244
             G L  LE+L L  NQL  LP  I  L+ L+ L L NN+L TLP EI  L+ L      
Sbjct: 191 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 250

Query: 245 --------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                         + L+ L L+ N+L TLP EI  L+ L EL L  N L+
Sbjct: 251 KNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLI 301



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 108/219 (49%), Gaps = 35/219 (15%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-------------- 102
           N+++L L HN L+  P    +  NL+ L L NN++T LP+ I                  
Sbjct: 197 NLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTT 256

Query: 103 ----------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                     L  L    N LT  +LPK++  L+NL+  +L GNQL   P  I  +  L+
Sbjct: 257 LPEEIGQLQNLQKLKLYENQLT--TLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQ 314

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYLGNN LN +P ++ +L  L  L L  N L  +P   G L +L+ L L  NQL +LP 
Sbjct: 315 TLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPE 374

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLL 251
            I  LK LK L LHNN    LP+E I      E+++ LL
Sbjct: 375 EIKQLKNLKKLYLHNN---PLPSEKI------ERIRKLL 404



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 124/226 (54%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L+  P    +  NL+ L+L++N++  LP+ I     L TL   +N   
Sbjct: 104 QNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFN 163

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             S+ K++  L+NL+   L  NQL   P +I  +  L+ L L +N LN +P+EI +L  L
Sbjct: 164 --SILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNL 221

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  N LT +P   G L  L+ L+L+ N+L +LP  I  L+ L+ L L+ N+L TLP
Sbjct: 222 QILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLP 281

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L+ L E    L L  N+L TLP  I  L+ L  L L +N L
Sbjct: 282 KEIGQLQNLQE----LDLDGNQLITLPENIGQLQRLQTLYLGNNQL 323



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 105/217 (48%), Gaps = 31/217 (14%)

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMS 123
           Y+ N++    N     N+R L+LS +++T LP  I       L+  ++     +LPK++ 
Sbjct: 23  YYRNITEVLKNPQ---NVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLI-ALPKEIG 78

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            L+NL+  +LS NQL                         +P EI +L  L  L L  N 
Sbjct: 79  KLQNLQQLHLSKNQLM-----------------------ALPEEIGQLQNLQKLKLYENQ 115

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT IP   G L  L+ L L+ NQL +LP  I  L+ L++L L +N+  ++  EI  L   
Sbjct: 116 LTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQL--- 172

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            + L+SL L +N+L  LP EI  L+ L  L L  N L
Sbjct: 173 -QNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQL 208


>gi|418709844|ref|ZP_13270630.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|418727665|ref|ZP_13286253.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409959023|gb|EKO22800.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|410770079|gb|EKR45306.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 280

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/230 (40%), Positives = 124/230 (53%), Gaps = 7/230 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNN 111
           K P ++ TL L +N L   P    +   L  L LS N++  LP+ I     L  L   +N
Sbjct: 34  KNPTDVQTLDLSNNQLITLPKEIGQLKELEWLSLSKNQLKTLPKEIEQLQKLRYLYLNDN 93

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  +LPK++  LK L+  +LS NQL   P +I  +  L+ L L NN L  +P+EI +L
Sbjct: 94  QLT--TLPKEIGYLKELQELDLSRNQLTTLPKEIEYLKDLESLNLINNQLTTLPKEIGQL 151

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
            +L VL L  N LT +P+    L +L+ L L +NQL +LP  I  LK L  L L  N+L 
Sbjct: 152 KELQVLDLSNNQLTTLPNEIEFLKRLQELYLRNNQLTTLPKGIGYLKELWLLDLSFNQLT 211

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L   I  LK    KL+ L L  N+L TLP EI TLK L EL L D P++
Sbjct: 212 ALSKGIGYLK----KLQKLDLSRNQLTTLPKEIETLKKLEELFLDDIPVL 257



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/166 (45%), Positives = 99/166 (59%), Gaps = 4/166 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++L K + N  +++  +LS NQL   P +I  +  L++L L  N L  +P+EI +L KL 
Sbjct: 27  QNLTKALKNPTDVQTLDLSNNQLITLPKEIGQLKELEWLSLSKNQLKTLPKEIEQLQKLR 86

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +P   G L +L+ L LS NQL +LP  I  LK L+SL L NN+L TLP 
Sbjct: 87  YLYLNDNQLTTLPKEIGYLKELQELDLSRNQLTTLPKEIEYLKDLESLNLINNQLTTLPK 146

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           EI  LK    +L+ L L NN+L TLP EI  LK L EL LR+N L 
Sbjct: 147 EIGQLK----ELQVLDLSNNQLTTLPNEIEFLKRLQELYLRNNQLT 188



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/207 (37%), Positives = 107/207 (51%), Gaps = 13/207 (6%)

Query: 23  SIKTLDF-SYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
            +K L++ S S    +TL  +IE L    Y         L L  N L+  P        L
Sbjct: 58  QLKELEWLSLSKNQLKTLPKEIEQLQKLRY---------LYLNDNQLTTLPKEIGYLKEL 108

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           + LDLS N++T LP+ I     L +L   NN LT  +LPK++  LK L+V +LS NQL  
Sbjct: 109 QELDLSRNQLTTLPKEIEYLKDLESLNLINNQLT--TLPKEIGQLKELQVLDLSNNQLTT 166

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +I  +  L+ LYL NN L  +P+ I  L +L +L L  N LT +    G L +L+ L
Sbjct: 167 LPNEIEFLKRLQELYLRNNQLTTLPKGIGYLKELWLLDLSFNQLTALSKGIGYLKKLQKL 226

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHN 227
            LS NQL +LP  I  LK L+ L L +
Sbjct: 227 DLSRNQLTTLPKEIETLKKLEELFLDD 253


>gi|24215147|ref|NP_712628.1| hypothetical protein LA_2447 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074466|ref|YP_005988783.1| hypothetical protein LIF_A2008 [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196215|gb|AAN49646.1| hypothetical protein LA_2447 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458255|gb|AER02800.1| hypothetical protein LIF_A2008 [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 498

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 124/249 (49%), Gaps = 24/249 (9%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLL 113
           +N+  L L  N L+  P    +  NL+ LDL +N++   P  I     L +L ++ N L+
Sbjct: 71  KNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLI 130

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L+NL+   L  N+L  FP +I  +  L+ L+L  N L  +P+EI +L  
Sbjct: 131 I---LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKN 187

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N  T +P   G L  L+ L LSDNQL +LP  I  L+ L+ L L NN+L   
Sbjct: 188 LQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRNNRLTVF 247

Query: 234 PTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           P EI  L+ L                    + L++L L NN+L   P EI  L+ L +L 
Sbjct: 248 PKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLE 307

Query: 275 LRDNPLVIR 283
           L  NPL ++
Sbjct: 308 LLMNPLSLK 316



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 86/235 (36%), Positives = 118/235 (50%), Gaps = 29/235 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNN--------RITHLPQAITNFPLSTL- 106
           +N+ TL L +N L+ FP    +  NL+ L+L  N        RI  L      FP S L 
Sbjct: 278 QNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKL------FPDSNLD 331

Query: 107 ---IARNNLLTAESLPKDMSNLKNLKVFNLS---GNQLEQFPIQILDIPTLKYLYLGNNS 160
              +A N +    +L ++    + LKVF LS    +  + FP  IL    L+ L L +  
Sbjct: 332 LREVAENGVYRNLNLAQE----EPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCG 387

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
            + +P+EI++L  L  L+LG N L +IP   G L  LEAL L  N+LE LP  I  L+ L
Sbjct: 388 FSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNL 447

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
           + L LH N L+  P EI  LK    KL+ L L  N+  T P EI  L+ L  L+L
Sbjct: 448 QKLSLHQNTLKIFPAEIEQLK----KLQKLDLSVNQFTTFPKEIGKLENLQTLNL 498



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/169 (39%), Positives = 90/169 (53%), Gaps = 4/169 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLSG +L   P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 36  TYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLEN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L   P    +L +LE+L LS+N+L  LP  I  L+ L+ L L+ NKL T 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  L    + L+ L L  N+L  LP EI  LK L  L L+DN   I
Sbjct: 156 PKEIGQL----QNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTI 200



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 117/257 (45%), Gaps = 36/257 (14%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  P    +  NL+ L L NNR+T  P+ I     L  L +  N LT
Sbjct: 209 QNLQTLNLSDNQLATLPVEIGQLQNLQELYLRNNRLTVFPKEIGQLQNLQMLCSPENRLT 268

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL------------- 161
           A  LPK+M  L+NL+  NL  N+L  FP +I  +  L+ L L  N L             
Sbjct: 269 A--LPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFP 326

Query: 162 -----------NHVPREIN----KLCKLHVLSLGGNSLTD-IPDTFGDLYQLEALILSDN 205
                      N V R +N    +  K+  LSL     +   P        L  L L D 
Sbjct: 327 DSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDC 386

Query: 206 QLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
              +LP  IS LK LK L L  N L+ +P+EI  LK     L++L L  N+L  LP EI 
Sbjct: 387 GFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLK----NLEALNLEANELERLPKEIG 442

Query: 266 TLKCLSELSLRDNPLVI 282
            L+ L +LSL  N L I
Sbjct: 443 QLRNLQKLSLHQNTLKI 459



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 4/111 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+     +   +  L LS  +L +LP  I  LK L+ L L  N L 
Sbjct: 25  CEIQAEEVEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLT 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            LP EI  L    E L+ L L +N+L T P  I+ L+ L  L L +N L+I
Sbjct: 85  VLPKEIGQL----ENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLII 131


>gi|410959449|ref|XP_003986321.1| PREDICTED: leucine-rich repeat-containing protein 1 [Felis catus]
          Length = 544

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 117/209 (55%), Gaps = 7/209 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 172 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS- 230

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 231 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKKLS 289

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+  GD   L  L+L++N+L +LP SI  LK L +L    NKL +LP 
Sbjct: 290 ILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPK 349

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           EI    C S  L    + +N+L  +P E+
Sbjct: 350 EIG--GCCS--LTVFCVRDNRLTRIPAEV 374



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 116/224 (51%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN++  
Sbjct: 57  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDI-- 114

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+ +S  K L++ + SGN L + P    ++  L  L + + SL  +P  I  L  L
Sbjct: 115 -PEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNL 173

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +PD+   L +LE L L +N++ +LP SI  L  LK L L  N+L  LP
Sbjct: 174 ASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELP 233

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK     L  L +  N+L  LP EI  L  L++L +  N
Sbjct: 234 QEIGNLK----NLLCLDVSENRLERLPEEISGLTSLTDLVISQN 273



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 125/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N++   P++ S    L+  D S N +T LP++  
Sbjct: 86  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 145

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 146 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 204

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 205 EIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 264

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTL 260
           L  L++  N L  +P  I  LK LS                   E L  L+L  N+L TL
Sbjct: 265 LTDLVISQNLLEMIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTL 324

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK LS L+   N LV
Sbjct: 325 PKSIGKLKKLSNLNADRNKLV 345



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 83/163 (50%), Gaps = 4/163 (2%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LP+    L  L+   LS N++++ P +I +   L  L +  N +  +P  I+    L + 
Sbjct: 71  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIA 130

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
              GN LT +P++F +L  L  L ++D  L+SLP +I NL  L SL L  N L  LP  +
Sbjct: 131 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 190

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             L+    +L+ L L NN++  LP  I  L  L +L L  N L
Sbjct: 191 TQLR----RLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQL 229


>gi|296273985|ref|YP_003656616.1| hypothetical protein [Arcobacter nitrofigilis DSM 7299]
 gi|296098159|gb|ADG94109.1| leucine-rich repeat protein [Arcobacter nitrofigilis DSM 7299]
          Length = 365

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/234 (36%), Positives = 124/234 (52%), Gaps = 12/234 (5%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           LY N L F P   +    L  L LS N ++ LP  I     L  L    N +T  SLP  
Sbjct: 113 LYKNRLRFIPREINNLQMLVELSLSKNNLSRLPDEICELKNLEVLALFENSIT--SLPSK 170

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  LK+L   NL GN+L   P  I  +  L  L + +N L  +P EI KL  L  L +  
Sbjct: 171 IGQLKSLIKLNLLGNELRLLPSSICQLEKLDSLSIFDNKLESLPSEIGKLQNLTELLVNH 230

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L ++P++ G+L +L+ L L +N+LE LP+SI NL  L  L L++N L+T+P+EI  L 
Sbjct: 231 NFLLELPESIGELKKLKVLWLYENKLEKLPSSIGNLTELTDLWLYSNNLKTIPSEISNL- 289

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN-----PLVIRFVSDMTY 290
                LK L L NN L  LP  + +LK L E +L +N     P+ + ++ D+++
Sbjct: 290 ---SNLKELWLSNNCLINLPHNLDSLKRLKEFNLSNNNIAHLPIELSYLKDLSW 340



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 96/165 (58%), Gaps = 4/165 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            LP+D   L NL+  NLS   L   P +I ++  LK L+L  N L  +PREIN L  L  
Sbjct: 74  GLPRDKQTLLNLEELNLSKYNLTYLPKEICNLTKLKKLHLYKNRLRFIPREINNLQMLVE 133

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           LSL  N+L+ +PD   +L  LE L L +N + SLP+ I  LK L  L L  N+LR LP+ 
Sbjct: 134 LSLSKNNLSRLPDEICELKNLEVLALFENSITSLPSKIGQLKSLIKLNLLGNELRLLPSS 193

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I    C  EKL SL + +NKL +LP+EI  L+ L+EL +  N L+
Sbjct: 194 I----CQLEKLDSLSIFDNKLESLPSEIGKLQNLTELLVNHNFLL 234



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 55/162 (33%), Positives = 82/162 (50%), Gaps = 3/162 (1%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L  N L   P +  +   L SL + +N++  LP  I     L+ L+  +N L    LP+ 
Sbjct: 182 LLGNELRLLPSSICQLEKLDSLSIFDNKLESLPSEIGKLQNLTELLVNHNFLLE--LPES 239

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  LK LKV  L  N+LE+ P  I ++  L  L+L +N+L  +P EI+ L  L  L L  
Sbjct: 240 IGELKKLKVLWLYENKLEKLPSSIGNLTELTDLWLYSNNLKTIPSEISNLSNLKELWLSN 299

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL 223
           N L ++P     L +L+   LS+N +  LP  +S LK L  L
Sbjct: 300 NCLINLPHNLDSLKRLKEFNLSNNNIAHLPIELSYLKDLSWL 341



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 7/145 (4%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLST--LIARNN 111
           K +N+  LL+ HN L   P++  +   L+ L L  N++  LP +I N    T   +  NN
Sbjct: 219 KLQNLTELLVNHNFLLELPESIGELKKLKVLWLYENKLEKLPSSIGNLTELTDLWLYSNN 278

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
           L T   +P ++SNL NLK   LS N L   P  +  +  LK   L NN++ H+P E++ L
Sbjct: 279 LKT---IPSEISNLSNLKELWLSNNCLINLPHNLDSLKRLKEFNLSNNNIAHLPIELSYL 335

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQ 196
             L  L +  +    I + F D  Q
Sbjct: 336 KDLSWLEVDKS--VPIGNEFDDFIQ 358


>gi|418668095|ref|ZP_13229499.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410756128|gb|EKR17754.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 427

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/226 (40%), Positives = 130/226 (57%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+++L L HN L+  P    +  NL SL L +N++  LP+ I     L  L  RNN LT
Sbjct: 187 QNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLT 246

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+   L+ N+L   P +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 247 --TLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNL 304

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L GN L  +P+  G L +L+ L L +NQL  LP  +  L+ L+SL L +N+L  LP
Sbjct: 305 QELDLDGNQLITLPENIGQLQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNALP 364

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L    +KL++L L  N+L TLP EI  LK L +L L +NPL
Sbjct: 365 KEIGKL----QKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPL 406



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 116/231 (50%), Gaps = 22/231 (9%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLK 129
            P    K  NL+ L LS N++  LP+ I     L  L    N LTA  +PK++  L+NL+
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTA--IPKEIGQLQNLQ 144

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
             NL+ NQL   P  I  +  L+ LYLG+N  N + +EI +L  L  L L  N L  +P 
Sbjct: 145 ELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPK 204

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS----- 244
             G L  LE+L L  NQL  LP  I  L+ L+ L L NN+L TLP EI  L+ L      
Sbjct: 205 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 245 --------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                         + L+ L L+ N+L TLP EI  L+ L EL L  N L+
Sbjct: 265 KNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLI 315



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 108/219 (49%), Gaps = 35/219 (15%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-------------- 102
           N+++L L HN L+  P    +  NL+ L L NN++T LP+ I                  
Sbjct: 211 NLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTT 270

Query: 103 ----------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                     L  L    N LT  +LPK++  L+NL+  +L GNQL   P  I  +  L+
Sbjct: 271 LPKEIGQLQNLQKLKLYENQLT--TLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQ 328

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYLGNN LN +P ++ +L  L  L L  N L  +P   G L +L+ L L  NQL +LP 
Sbjct: 329 TLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPE 388

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLL 251
            I  LK LK L LHNN    LP+E I      E+++ LL
Sbjct: 389 EIKQLKNLKKLYLHNN---PLPSEKI------ERIRKLL 418



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 124/226 (54%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L+  P    +  NL+ L+L++N++  LP+ I     L TL   +N   
Sbjct: 118 QNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFN 177

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             S+ K++  L+NL+   L  NQL   P +I  +  L+ L L +N LN +P+EI +L  L
Sbjct: 178 --SILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNL 235

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  N LT +P   G L  L+ L+L+ N+L +LP  I  L+ L+ L L+ N+L TLP
Sbjct: 236 QILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLP 295

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L+ L E    L L  N+L TLP  I  L+ L  L L +N L
Sbjct: 296 KEIGQLQNLQE----LDLDGNQLITLPENIGQLQRLQTLYLGNNQL 337



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 105/217 (48%), Gaps = 31/217 (14%)

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMS 123
           Y+ N++    N     N+R L+LS +++T LP  I       L+  ++     +LPK++ 
Sbjct: 37  YYRNITEVLKNPQ---NVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLI-ALPKEIG 92

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            L+NL+  +LS NQL                         +P EI +L  L  L L  N 
Sbjct: 93  KLQNLQQLHLSKNQLM-----------------------ALPEEIGQLQNLQKLKLYENQ 129

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT IP   G L  L+ L L+ NQL +LP  I  L+ L++L L +N+  ++  EI  L   
Sbjct: 130 LTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQL--- 186

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            + L+SL L +N+L  LP EI  L+ L  L L  N L
Sbjct: 187 -QNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQL 222


>gi|456970650|gb|EMG11404.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 426

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/226 (40%), Positives = 130/226 (57%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+++L L HN L+  P    +  NL SL L +N++  LP+ I     L  L  RNN LT
Sbjct: 187 QNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLT 246

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+   L+ N+L   P +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 247 --TLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNL 304

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L GN L  +P+  G L +L+ L L +NQL  LP  +  L+ L+SL L +N+L  LP
Sbjct: 305 QELDLDGNQLITLPENIGQLQRLQTLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNALP 364

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L    +KL++L L  N+L TLP EI  LK L +L L +NPL
Sbjct: 365 KEIGKL----QKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPL 406



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 116/231 (50%), Gaps = 22/231 (9%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLK 129
            P    K  NL+ L LS N++  LP+ I     L  L    N LTA  +PK++  L+NL+
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTA--IPKEIGQLQNLQ 144

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
             NL+ NQL   P  I  +  L+ LYLG+N  N + +EI +L  L  L L  N L  +P 
Sbjct: 145 ELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPK 204

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS----- 244
             G L  LE+L L  NQL  LP  I  L+ L+ L L NN+L TLP EI  L+ L      
Sbjct: 205 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 245 --------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                         + L+ L L+ N+L TLP EI  L+ L EL L  N L+
Sbjct: 265 KNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLI 315



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 108/219 (49%), Gaps = 35/219 (15%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-------------- 102
           N+++L L HN L+  P    +  NL+ L L NN++T LP+ I                  
Sbjct: 211 NLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTT 270

Query: 103 ----------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                     L  L    N LT  +LPK++  L+NL+  +L GNQL   P  I  +  L+
Sbjct: 271 LPKEIGQLQNLQKLKLYENQLT--TLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQ 328

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYLGNN LN +P ++ +L  L  L L  N L  +P   G L +L+ L L  NQL +LP 
Sbjct: 329 TLYLGNNQLNVLPNKLEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPE 388

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLL 251
            I  LK LK L LHNN    LP+E I      E+++ LL
Sbjct: 389 EIKQLKNLKKLYLHNN---PLPSEKI------ERIRKLL 418



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 124/226 (54%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L+  P    +  NL+ L+L++N++  LP+ I     L TL   +N   
Sbjct: 118 QNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFN 177

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             S+ K++  L+NL+   L  NQL   P +I  +  L+ L L +N LN +P+EI +L  L
Sbjct: 178 --SILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNL 235

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  N LT +P   G L  L+ L+L+ N+L +LP  I  L+ L+ L L+ N+L TLP
Sbjct: 236 QILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKEIGQLQNLQKLKLYENQLTTLP 295

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L+ L E    L L  N+L TLP  I  L+ L  L L +N L
Sbjct: 296 KEIGQLQNLQE----LDLDGNQLITLPENIGQLQRLQTLYLGNNQL 337



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 91/182 (50%), Gaps = 27/182 (14%)

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQI----------------LDIP-------TLKYLYLGN 158
           + N +N+++ NLSG++L   P +I                + +P        L+ L+L  
Sbjct: 45  LKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSK 104

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P EI +L  L  L L  N LT IP   G L  L+ L L+ NQL +LP  I  L+
Sbjct: 105 NQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQ 164

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L++L L +N+  ++  EI  L    + L+SL L +N+L  LP EI  L+ L  L L  N
Sbjct: 165 RLQTLYLGHNQFNSILKEIGQL----QNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHN 220

Query: 279 PL 280
            L
Sbjct: 221 QL 222


>gi|418698103|ref|ZP_13259082.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410762807|gb|EKR28966.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 595

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 124/249 (49%), Gaps = 24/249 (9%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLL 113
           +N+  L L  N L+  P    +  NL+ LDL +N++   P  I     L +L ++ N L+
Sbjct: 71  KNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLI 130

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L+NL+   L  N+L  FP +I  +  L+ L+L  N L  +P+EI +L  
Sbjct: 131 I---LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKN 187

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N  T +P   G L  L+ L LSDNQL +LP  I  L+ L+ L L NN+L   
Sbjct: 188 LQTLDLQDNQFTTLPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQELYLRNNRLTVF 247

Query: 234 PTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           P EI  L+ L                    + L++L L NN+L   P EI  L+ L +L 
Sbjct: 248 PKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLE 307

Query: 275 LRDNPLVIR 283
           L  NPL ++
Sbjct: 308 LLMNPLSLK 316



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/213 (38%), Positives = 117/213 (54%), Gaps = 5/213 (2%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKV 130
           FP    KF NLR L+L +   + LP+ I+       +A   L   +++P ++  LKNL+ 
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALG-LNGLKNIPSEIGQLKNLEA 426

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NL  N+LE+ P +I  +  L+ L L  N+L   P EI +L KL  L L  N  T  P  
Sbjct: 427 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
            G L  L+ L L  NQL +L A I  L+ L+ L L++N+   LP EI  LK    KL++L
Sbjct: 487 IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLK----KLQTL 542

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
            L NN+L TLPTEI  L+ L  L L++N L ++
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLK 575



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 112/221 (50%), Gaps = 11/221 (4%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N+  L LY    S  P   S+  NL+ L L  N + ++P  I     L  L    N 
Sbjct: 374 KFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE 433

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L  E LPK++  L+NL+  +L  N L+ FP +I  +  L+ L L  N     P+EI KL 
Sbjct: 434 L--ERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLE 491

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L+L  N LT++    G L  L+ L L+DNQ   LP  I  LK L++L L NN+L T
Sbjct: 492 NLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTT 551

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTE----IITLKC 269
           LPTEI  L    + L+ L L NN+L     E    ++ LKC
Sbjct: 552 LPTEIGQL----QNLQWLYLQNNQLSLKEQERIRKLLPLKC 588



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 116/261 (44%), Gaps = 44/261 (16%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNN--------RITHLPQAITNFPLSTL- 106
           +N+ TL L +N L+ FP    +  NL+ L+L  N        RI  L      FP S L 
Sbjct: 278 QNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKL------FPDSNLD 331

Query: 107 ---IARNNLLT----------------------AESLPKDMSNLKNLKVFNLSGNQLEQF 141
              +A N +                        ++S PK +   +NL+  NL        
Sbjct: 332 LREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTL 391

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P +I  +  LKYL LG N L ++P EI +L  L  L+L  N L  +P   G L  L+ L 
Sbjct: 392 PKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLS 451

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           L  N L+  PA I  LK L+ L L  N+  T P EI  L    E L++L L  N+L  L 
Sbjct: 452 LHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKL----ENLQTLNLQRNQLTNLT 507

Query: 262 TEIITLKCLSELSLRDNPLVI 282
            EI  L+ L EL L DN   +
Sbjct: 508 AEIGQLQNLQELDLNDNQFTV 528



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 89/165 (53%), Gaps = 4/165 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLSG +L   P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 36  TYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L   P    +L +LE+L LS+N+L  LP  I  L+ L+ L L+ NKL T 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P EI  L    + L+ L L  N+L  LP EI  LK L  L L+DN
Sbjct: 156 PKEIGQL----QNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDN 196



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 38/111 (34%), Positives = 55/111 (49%), Gaps = 4/111 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+     +   +  L LS  +L +LP  I  LK L+ L L  N L 
Sbjct: 25  CEIQAEEVEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLT 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           TLP EI  L    E L+ L L +N+L T P  I+ L+ L  L L +N L+I
Sbjct: 85  TLPKEIGQL----ENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLII 131


>gi|418735798|ref|ZP_13292203.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|410748526|gb|EKR01425.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 264

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/218 (42%), Positives = 117/218 (53%), Gaps = 13/218 (5%)

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLTAESLPKD 121
           YHN      +     T++R LDLSN R+T LP+ I     L  L + RN L T   LP +
Sbjct: 31  YHN----LTEALQNPTDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTT---LPNE 83

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L+NL+  NL+ NQL+  P +I  +  L+ L L  N L  +P EI +L  L +L L  
Sbjct: 84  IGELQNLRELNLTKNQLKTLPKEIGKLQNLRELRLAENQLKTLPNEIGELQNLTILDLRN 143

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  IP   G L  L  L L  NQL +LP  I  LK L  L L+ N+L TLP EI  L 
Sbjct: 144 NELKTIPKDIGKLKNLTVLDLHINQLTTLPKEIGKLKNLTKLDLNYNELTTLPKEIGEL- 202

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
              +KL  L L NN+L+TLP EI  LK L +L L D P
Sbjct: 203 ---QKLTILDLRNNELKTLPNEIGKLKELRKLYLDDIP 237



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 74/193 (38%), Positives = 106/193 (54%), Gaps = 5/193 (2%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNL 112
           P ++  L L +  L+  P    +  NLR L+L  N++T LP  I     L  L + +N L
Sbjct: 41  PTDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGELQNLRELNLTKNQL 100

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
              ++LPK++  L+NL+   L+ NQL+  P +I ++  L  L L NN L  +P++I KL 
Sbjct: 101 ---KTLPKEIGKLQNLRELRLAENQLKTLPNEIGELQNLTILDLRNNELKTIPKDIGKLK 157

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L VL L  N LT +P   G L  L  L L+ N+L +LP  I  L+ L  L L NN+L+T
Sbjct: 158 NLTVLDLHINQLTTLPKEIGKLKNLTKLDLNYNELTTLPKEIGELQKLTILDLRNNELKT 217

Query: 233 LPTEIITLKCLSE 245
           LP EI  LK L +
Sbjct: 218 LPNEIGKLKELRK 230



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 69/198 (34%), Positives = 104/198 (52%), Gaps = 14/198 (7%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLL 113
           +N+  L LY N L+  P+   +  NLR L+L+ N++  LP+ I     L  L +A N L 
Sbjct: 65  QNLRILNLYRNQLTTLPNEIGELQNLRELNLTKNQLKTLPKEIGKLQNLRELRLAENQL- 123

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
             ++LP ++  L+NL + +L  N+L+  P  I  +  L  L L  N L  +P+EI KL  
Sbjct: 124 --KTLPNEIGELQNLTILDLRNNELKTIPKDIGKLKNLTVLDLHINQLTTLPKEIGKLKN 181

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P   G+L +L  L L +N+L++LP  I  LK L+ L L        
Sbjct: 182 LTKLDLNYNELTTLPKEIGELQKLTILDLRNNELKTLPNEIGKLKELRKLYLD------- 234

Query: 234 PTEIITLKCLSEKLKSLL 251
             +I T +   EK++ LL
Sbjct: 235 --DIPTWRSQEEKIRKLL 250



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 94/168 (55%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +L + + N  ++++ +LS  +L   P +I ++  L+ L L  N L  +P EI +L  
Sbjct: 30  TYHNLTEALQNPTDVRILDLSNKRLTTLPKEIGELQNLRILNLYRNQLTTLPNEIGELQN 89

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N L  +P   G L  L  L L++NQL++LP  I  L+ L  L L NN+L+T+
Sbjct: 90  LRELNLTKNQLKTLPKEIGKLQNLRELRLAENQLKTLPNEIGELQNLTILDLRNNELKTI 149

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P +I  LK L+     L LH N+L TLP EI  LK L++L L  N L 
Sbjct: 150 PKDIGKLKNLT----VLDLHINQLTTLPKEIGKLKNLTKLDLNYNELT 193


>gi|456824980|gb|EMF73376.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 426

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/226 (40%), Positives = 130/226 (57%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+++L L HN L+  P    +  NL SL L +N++  LP+ I     L  L  RNN LT
Sbjct: 187 QNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLT 246

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+   L+ N+L   P +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 247 --TLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNL 304

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L GN L  +P+  G L +L+ L L +NQL  LP  +  L+ L+SL L +N+L  LP
Sbjct: 305 QELDLDGNQLITLPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALP 364

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L    +KL++L L  N+L TLP EI  LK L +L L +NPL
Sbjct: 365 KEIGKL----QKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPL 406



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 116/231 (50%), Gaps = 22/231 (9%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLK 129
            P    K  NL+ L LS N++  LP+ I     L  L    N LTA  +PK++  L+NL+
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTA--IPKEIGQLQNLQ 144

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
             NL+ NQL   P  I  +  L+ LYLG+N  N + +EI +L  L  L L  N L  +P 
Sbjct: 145 ELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPK 204

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS----- 244
             G L  LE+L L  NQL  LP  I  L+ L+ L L NN+L TLP EI  L+ L      
Sbjct: 205 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 245 --------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                         + L+ L L+ N+L TLP EI  L+ L EL L  N L+
Sbjct: 265 KNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLI 315



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 79/219 (36%), Positives = 108/219 (49%), Gaps = 35/219 (15%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-------------- 102
           N+++L L HN L+  P    +  NL+ L L NN++T LP+ I                  
Sbjct: 211 NLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTT 270

Query: 103 ----------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                     L  L    N LT  +LPK++  L+NL+  +L GNQL   P  I  +  L+
Sbjct: 271 LPEEIGQLQNLQKLKLYENQLT--TLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQ 328

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYLGNN LN +P ++ +L  L  L L  N L  +P   G L +L+ L L  NQL +LP 
Sbjct: 329 TLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPE 388

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLL 251
            I  LK LK L LHNN    LP+E I      E+++ LL
Sbjct: 389 EIKQLKNLKKLYLHNN---PLPSEKI------ERIRKLL 418



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 124/226 (54%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L+  P    +  NL+ L+L++N++  LP+ I     L TL   +N   
Sbjct: 118 QNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFN 177

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             S+ K++  L+NL+   L  NQL   P +I  +  L+ L L +N LN +P+EI +L  L
Sbjct: 178 --SILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNL 235

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  N LT +P   G L  L+ L+L+ N+L +LP  I  L+ L+ L L+ N+L TLP
Sbjct: 236 QILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLP 295

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L+ L E    L L  N+L TLP  I  L+ L  L L +N L
Sbjct: 296 KEIGQLQNLQE----LDLDGNQLITLPENIGQLQRLQTLYLGNNQL 337



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 105/217 (48%), Gaps = 31/217 (14%)

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMS 123
           Y+ N++    N     N+R L+LS +++T LP  I       L+  ++     +LPK++ 
Sbjct: 37  YYRNITEVLKNPQ---NVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLI-ALPKEIG 92

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            L+NL+  +LS NQL                         +P EI +L  L  L L  N 
Sbjct: 93  KLQNLQQLHLSKNQLM-----------------------ALPEEIGQLQNLQKLKLYENQ 129

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT IP   G L  L+ L L+ NQL +LP  I  L+ L++L L +N+  ++  EI  L   
Sbjct: 130 LTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQL--- 186

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            + L+SL L +N+L  LP EI  L+ L  L L  N L
Sbjct: 187 -QNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQL 222


>gi|395833350|ref|XP_003789701.1| PREDICTED: leucine-rich repeat-containing protein 1 [Otolemur
           garnettii]
          Length = 524

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 117/209 (55%), Gaps = 7/209 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I   F L  L    N L+ 
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALFHLKDLWLDGNQLS- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 211 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKKLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+  GD   L  L+L++N+L +LP SI  LK L +     NKL +LP 
Sbjct: 270 ILKVDQNRLTQLPEAIGDCDSLTELVLTENRLVTLPKSIGKLKKLSNFNADRNKLTSLPK 329

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           EI    C S  L    + +N+L  +P E+
Sbjct: 330 EIG--GCSS--LTVFCVRDNRLTRIPAEM 354



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/235 (35%), Positives = 121/235 (51%), Gaps = 10/235 (4%)

Query: 46  LPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLS 104
           +P+  Y +   +++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L 
Sbjct: 27  VPDEIY-RYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLV 85

Query: 105 TL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNH 163
            L ++RN++     +P+ +S  K L++ + SGN L + P    ++  L  L + + SL  
Sbjct: 86  ELDVSRNDI---PEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQS 142

Query: 164 VPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL 223
           +P  I  L  L  L L  N LT +PD+   L +LE L L +N++ +LP SI  L  LK L
Sbjct: 143 LPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALFHLKDL 202

Query: 224 LLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L  N+L  LP EI  LK     L  L +  N+L  LP EI  L  L++L +  N
Sbjct: 203 WLDGNQLSELPQEIGNLK----NLLCLDVSENRLERLPEEISGLTSLTDLVISQN 253



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 121/242 (50%), Gaps = 11/242 (4%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N++   P++ S    L+  D S N +T LP++  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 126 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 185 EIYNLPESIGALFHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 244

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L  L++  N L  +P  I  LK    KL  L +  N+L  LP  I     L+EL L +N 
Sbjct: 245 LTDLVISQNLLEMIPDGIGKLK----KLSILKVDQNRLTQLPEAIGDCDSLTELVLTENR 300

Query: 280 LV 281
           LV
Sbjct: 301 LV 302



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 83/163 (50%), Gaps = 4/163 (2%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LP+    L  L+   LS N++++ P +I +   L  L +  N +  +P  I+    L + 
Sbjct: 51  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIA 110

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
              GN LT +P++F +L  L  L ++D  L+SLP +I NL  L SL L  N L  LP  +
Sbjct: 111 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 170

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             L+    +L+ L L NN++  LP  I  L  L +L L  N L
Sbjct: 171 TQLR----RLEELDLGNNEIYNLPESIGALFHLKDLWLDGNQL 209


>gi|418686305|ref|ZP_13247474.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410739259|gb|EKQ83988.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
          Length = 258

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 85/201 (42%), Positives = 114/201 (56%), Gaps = 7/201 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           ++R+LDLS N++T LP+ I     L +L   NN L   +LPK++  L+ L+   L  NQL
Sbjct: 38  DVRTLDLSKNQLTTLPKEIEKLKELESLDLSNNQLV--TLPKEIGKLQKLRYLYLDHNQL 95

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
              P +I  +  L+ L L NN L  +P+EI  L KL VL L  N LT IP   G L +L+
Sbjct: 96  TTLPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKKLQVLDLNDNQLTTIPKEIGYLKKLQ 155

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L L +NQL +LP  I  L+ L  L L  N+L TLP EI  L    +KL+ L L NN+  
Sbjct: 156 ELYLINNQLTTLPKEIGYLEELWLLDLRKNQLTTLPKEIGKL----QKLEKLYLKNNQFT 211

Query: 259 TLPTEIITLKCLSELSLRDNP 279
           T P EI  L+ L+ L+L D P
Sbjct: 212 TFPKEIGKLQKLNTLNLDDIP 232



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 76/191 (39%), Positives = 103/191 (53%), Gaps = 3/191 (1%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLL 113
           P ++ TL L  N L+  P    K   L SLDLSNN++  LP+ I     L  L   +N L
Sbjct: 36  PMDVRTLDLSKNQLTTLPKEIEKLKELESLDLSNNQLVTLPKEIGKLQKLRYLYLDHNQL 95

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +LPK++  LK+L+  +L  NQL   P +I  +  L+ L L +N L  +P+EI  L K
Sbjct: 96  T--TLPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKKLQVLDLNDNQLTTIPKEIGYLKK 153

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +P   G L +L  L L  NQL +LP  I  L+ L+ L L NN+  T 
Sbjct: 154 LQELYLINNQLTTLPKEIGYLEELWLLDLRKNQLTTLPKEIGKLQKLEKLYLKNNQFTTF 213

Query: 234 PTEIITLKCLS 244
           P EI  L+ L+
Sbjct: 214 PKEIGKLQKLN 224



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/203 (37%), Positives = 110/203 (54%), Gaps = 14/203 (6%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           + ++TLD S + L   TL  +IE         K + +++L L +N L   P    K   L
Sbjct: 37  MDVRTLDLSKNQLT--TLPKEIE---------KLKELESLDLSNNQLVTLPKEIGKLQKL 85

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           R L L +N++T LP+ I     L +L  RNN LT  +LPK++  LK L+V +L+ NQL  
Sbjct: 86  RYLYLDHNQLTTLPKEIEYLKDLESLDLRNNQLT--TLPKEIEYLKKLQVLDLNDNQLTT 143

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +I  +  L+ LYL NN L  +P+EI  L +L +L L  N LT +P   G L +LE L
Sbjct: 144 IPKEIGYLKKLQELYLINNQLTTLPKEIGYLEELWLLDLRKNQLTTLPKEIGKLQKLEKL 203

Query: 201 ILSDNQLESLPASISNLKMLKSL 223
            L +NQ  + P  I  L+ L +L
Sbjct: 204 YLKNNQFTTFPKEIGKLQKLNTL 226



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 72/165 (43%), Positives = 95/165 (57%), Gaps = 4/165 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +L K + N  +++  +LS NQL   P +I  +  L+ L L NN L  +P+EI KL KL  
Sbjct: 28  NLNKALQNPMDVRTLDLSKNQLTTLPKEIEKLKELESLDLSNNQLVTLPKEIGKLQKLRY 87

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N LT +P     L  LE+L L +NQL +LP  I  LK L+ L L++N+L T+P E
Sbjct: 88  LYLDHNQLTTLPKEIEYLKDLESLDLRNNQLTTLPKEIEYLKKLQVLDLNDNQLTTIPKE 147

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I  LK    KL+ L L NN+L TLP EI  L+ L  L LR N L 
Sbjct: 148 IGYLK----KLQELYLINNQLTTLPKEIGYLEELWLLDLRKNQLT 188


>gi|421119314|ref|ZP_15579638.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347944|gb|EKO98795.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 289

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 120/224 (53%), Gaps = 28/224 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           ++  L+L    L+  P    +  NL+ LDL  N+                         +
Sbjct: 75  DVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQF------------------------K 110

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++PK +  LKNL++ +L  NQ +  P +I  +  L+ L L +N L  +P+EI KL  L V
Sbjct: 111 TVPKKIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQV 170

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+L  N LT +P   G L  L+ L L  N+L++LP  I  LK L++L L+ N+L TLP E
Sbjct: 171 LNLSSNQLTTLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPRE 230

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L+ L+E    L L +N++ TLP EII L+ L +L+L +NP+
Sbjct: 231 IGRLQSLTE----LHLQHNQIATLPDEIIQLQNLRKLTLYENPI 270


>gi|421110748|ref|ZP_15571239.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803845|gb|EKS09972.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 291

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/217 (38%), Positives = 117/217 (53%), Gaps = 7/217 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSN 124
           N L+  P       NL+ L+L++N+ T LP+ I N   L  L    + LT  +LPK++  
Sbjct: 63  NQLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQKLQKLDLNYSRLT--TLPKEIGK 120

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ L+  NL  NQL+  P +I  +  LK L L  N L  +P+EI  L KL  L L  N L
Sbjct: 121 LQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQKLQTLDLAQNQL 180

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
             +P     L +LEAL L +N+L +LP  I NL+ L+ L L++N+  TLP EI  L+   
Sbjct: 181 KTLPKEIEKLQKLEALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQS-- 238

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             L+SL L  N L + P EI  L+ L  L L  NP +
Sbjct: 239 --LESLNLSGNSLTSFPEEIGKLQKLKWLYLGGNPFL 273



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 78/201 (38%), Positives = 110/201 (54%), Gaps = 7/201 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N+  L L  N  +  P+       L+ LDL+ +R+T LP+ I     L  L    N L 
Sbjct: 76  QNLQELNLNSNQFTTLPEEIGNLQKLQKLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQL- 134

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            ++LPK++  L+NLK  +L+GN+L   P +I ++  L+ L L  N L  +P+EI KL KL
Sbjct: 135 -KTLPKEIGKLQNLKNLSLNGNELTTLPKEIGNLQKLQTLDLAQNQLKTLPKEIEKLQKL 193

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L LG N LT +P   G+L  L+ L L+ NQ  +LP  I NL+ L+SL L  N L + P
Sbjct: 194 EALHLGNNELTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQSLESLNLSGNSLTSFP 253

Query: 235 TEIITLKCLSEKLKSLLLHNN 255
            EI  L    +KLK L L  N
Sbjct: 254 EEIGKL----QKLKWLYLGGN 270



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 66/169 (39%), Positives = 97/169 (57%), Gaps = 8/169 (4%)

Query: 117 SLPKDMSNLKNLKVFNLS----GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           +LP+ + +  +++V +L     GNQL   P +I ++  L+ L L +N    +P EI  L 
Sbjct: 40  NLPEALQHPTDVRVLDLGPPEGGNQLTTLPKEIGNLQNLQELNLNSNQFTTLPEEIGNLQ 99

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  L L  + LT +P   G L +L+ L L  NQL++LP  I  L+ LK+L L+ N+L T
Sbjct: 100 KLQKLDLNYSRLTTLPKEIGKLQKLQKLNLYKNQLKTLPKEIGKLQNLKNLSLNGNELTT 159

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP EI  L    +KL++L L  N+L+TLP EI  L+ L  L L +N L 
Sbjct: 160 LPKEIGNL----QKLQTLDLAQNQLKTLPKEIEKLQKLEALHLGNNELT 204


>gi|418703173|ref|ZP_13264063.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|418714227|ref|ZP_13274787.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421127504|ref|ZP_15587728.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421134109|ref|ZP_15594251.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410021847|gb|EKO88630.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410435594|gb|EKP84726.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410767237|gb|EKR37914.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410789170|gb|EKR82872.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|456968636|gb|EMG09806.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 283

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/230 (40%), Positives = 124/230 (53%), Gaps = 7/230 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNN 111
           K P ++ TL L +N L   P    +   L  L LS N++  LP+ I     L  L   +N
Sbjct: 37  KNPTDVQTLDLSNNQLITLPKEIGQLKELEWLSLSKNQLKTLPKEIEQLQKLRYLYLNDN 96

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  +LPK++  LK L+  +LS NQL   P +I  +  L+ L L NN L  +P+EI +L
Sbjct: 97  QLT--TLPKEIGYLKELQELDLSRNQLTTLPKEIEYLKDLESLNLINNQLTTLPKEIGQL 154

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
            +L VL L  N LT +P+    L +L+ L L +NQL +LP  I  LK L  L L  N+L 
Sbjct: 155 KELQVLDLSNNQLTTLPNEIEFLKRLQELYLRNNQLTTLPKGIGYLKELWLLDLSFNQLT 214

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L   I  LK    KL+ L L  N+L TLP EI TLK L EL L D P++
Sbjct: 215 ALSKGIGYLK----KLQKLDLSRNQLTTLPKEIETLKKLEELFLDDIPVL 260



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 75/166 (45%), Positives = 99/166 (59%), Gaps = 4/166 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++L K + N  +++  +LS NQL   P +I  +  L++L L  N L  +P+EI +L KL 
Sbjct: 30  QNLTKALKNPTDVQTLDLSNNQLITLPKEIGQLKELEWLSLSKNQLKTLPKEIEQLQKLR 89

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +P   G L +L+ L LS NQL +LP  I  LK L+SL L NN+L TLP 
Sbjct: 90  YLYLNDNQLTTLPKEIGYLKELQELDLSRNQLTTLPKEIEYLKDLESLNLINNQLTTLPK 149

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           EI  LK    +L+ L L NN+L TLP EI  LK L EL LR+N L 
Sbjct: 150 EIGQLK----ELQVLDLSNNQLTTLPNEIEFLKRLQELYLRNNQLT 191



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/207 (37%), Positives = 107/207 (51%), Gaps = 13/207 (6%)

Query: 23  SIKTLDF-SYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
            +K L++ S S    +TL  +IE L    Y         L L  N L+  P        L
Sbjct: 61  QLKELEWLSLSKNQLKTLPKEIEQLQKLRY---------LYLNDNQLTTLPKEIGYLKEL 111

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           + LDLS N++T LP+ I     L +L   NN LT  +LPK++  LK L+V +LS NQL  
Sbjct: 112 QELDLSRNQLTTLPKEIEYLKDLESLNLINNQLT--TLPKEIGQLKELQVLDLSNNQLTT 169

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +I  +  L+ LYL NN L  +P+ I  L +L +L L  N LT +    G L +L+ L
Sbjct: 170 LPNEIEFLKRLQELYLRNNQLTTLPKGIGYLKELWLLDLSFNQLTALSKGIGYLKKLQKL 229

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHN 227
            LS NQL +LP  I  LK L+ L L +
Sbjct: 230 DLSRNQLTTLPKEIETLKKLEELFLDD 256


>gi|421110784|ref|ZP_15571275.1| leucine rich repeat protein [Leptospira santarosai str. JET]
 gi|410803881|gb|EKS10008.1| leucine rich repeat protein [Leptospira santarosai str. JET]
          Length = 371

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 101/282 (35%), Positives = 142/282 (50%), Gaps = 23/282 (8%)

Query: 31  YSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNR 90
           +  LD+E   T  E L N      P  +  L L    L+  P       +L+ LDLS N 
Sbjct: 18  FYKLDAEDFHTLNEALQN------PTQVRVLHLNAKKLTALPKEIGNLQHLQKLDLSFNT 71

Query: 91  ITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIP 149
           IT LPQ I N   L  L    N LT  +LPK++  L++L+   L  NQL   P +I  + 
Sbjct: 72  ITVLPQEIGNLQSLQDLNLWENELT--TLPKEIGKLQSLQRLTLWENQLTTLPKEIGKLQ 129

Query: 150 TLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
           +L+ L LG N L  +P+E  +L  L  LSL  N LT IP     L  L+ +  ++NQL++
Sbjct: 130 SLQELILGKNQLTTIPKEFWQLQYLQRLSLSFNQLTAIPKEIEQLQNLQEMDSNNNQLKT 189

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           LP  I NL+ L+ L L +NK+  LP EI  L    + L+ L L +NK+  LP EI  L+ 
Sbjct: 190 LPKEIGNLQHLQKLYLSSNKITILPKEIGNL----QHLQKLYLSSNKITILPKEIGNLQK 245

Query: 270 LSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYS 311
           L  L L         V+ +T  P  + +L  R LKV  +D++
Sbjct: 246 LEYLYLE--------VNQLTTLPKEIGQL--RNLKVLYLDHN 277



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 120/239 (50%), Gaps = 22/239 (9%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L+ N L+  P    K  +L+ L L  N++T LP+ I     L  LI   N LT  ++PK+
Sbjct: 90  LWENELTTLPKEIGKLQSLQRLTLWENQLTTLPKEIGKLQSLQELILGKNQLT--TIPKE 147

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
              L+ L+  +LS NQL   P +I  +  L+ +   NN L  +P+EI  L  L  L L  
Sbjct: 148 FWQLQYLQRLSLSFNQLTAIPKEIEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSS 207

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N +T +P   G+L  L+ L LS N++  LP  I NL+ L+ L L  N+L TLP EI  L+
Sbjct: 208 NKITILPKEIGNLQHLQKLYLSSNKITILPKEIGNLQKLEYLYLEVNQLTTLPKEIGQLR 267

Query: 242 CLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L                    + L++L L  NKL TLP EI  L+ L  L L +NPL 
Sbjct: 268 NLKVLYLDHNNLANIPKEIGKLQNLQTLSLDRNKLTTLPKEIENLQSLESLDLSNNPLT 326



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 83/230 (36%), Positives = 127/230 (55%), Gaps = 7/230 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +++  L+L  N L+  P    +   L+ L LS N++T +P+ I     L  + + NN 
Sbjct: 127 KLQSLQELILGKNQLTTIPKEFWQLQYLQRLSLSFNQLTAIPKEIEQLQNLQEMDSNNNQ 186

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L  ++LPK++ NL++L+   LS N++   P +I ++  L+ LYL +N +  +P+EI  L 
Sbjct: 187 L--KTLPKEIGNLQHLQKLYLSSNKITILPKEIGNLQHLQKLYLSSNKITILPKEIGNLQ 244

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  L L  N LT +P   G L  L+ L L  N L ++P  I  L+ L++L L  NKL T
Sbjct: 245 KLEYLYLEVNQLTTLPKEIGQLRNLKVLYLDHNNLANIPKEIGKLQNLQTLSLDRNKLTT 304

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           LP EI  L+ L    +SL L NN L + P EI  L+ L  L L + P ++
Sbjct: 305 LPKEIENLQSL----ESLDLSNNPLTSFPEEIGKLQHLKWLRLENIPTLL 350



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/208 (37%), Positives = 115/208 (55%), Gaps = 7/208 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           +  L L  N L+  P    +  NL+ +D +NN++  LP+ I N   L  L   +N +T  
Sbjct: 154 LQRLSLSFNQLTAIPKEIEQLQNLQEMDSNNNQLKTLPKEIGNLQHLQKLYLSSNKITI- 212

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            LPK++ NL++L+   LS N++   P +I ++  L+YLYL  N L  +P+EI +L  L V
Sbjct: 213 -LPKEIGNLQHLQKLYLSSNKITILPKEIGNLQKLEYLYLEVNQLTTLPKEIGQLRNLKV 271

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N+L +IP   G L  L+ L L  N+L +LP  I NL+ L+SL L NN L + P E
Sbjct: 272 LYLDHNNLANIPKEIGKLQNLQTLSLDRNKLTTLPKEIENLQSLESLDLSNNPLTSFPEE 331

Query: 237 IITLKCLS----EKLKSLLLHNNKLRTL 260
           I  L+ L     E + +LL    K+R L
Sbjct: 332 IGKLQHLKWLRLENIPTLLPEKEKIRKL 359


>gi|418723960|ref|ZP_13282794.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409962758|gb|EKO26492.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 426

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/226 (40%), Positives = 130/226 (57%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+++L L HN L+  P    +  NL SL L +N++  LP+ I     L  L  RNN LT
Sbjct: 187 QNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLT 246

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+   L+ N+L   P +I  +  L+ L L  N L  +P+EI +L  L
Sbjct: 247 --TLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNL 304

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L GN L  +P+  G L +L+ L L +NQL  LP  +  L+ L+SL L +N+L  LP
Sbjct: 305 QELDLDGNQLITLPENIGQLQRLQTLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALP 364

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L    +KL++L L  N+L TLP EI  LK L +L L +NPL
Sbjct: 365 KEIGKL----QKLQTLNLKYNQLATLPEEIKQLKNLKKLYLHNNPL 406



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 116/231 (50%), Gaps = 22/231 (9%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLK 129
            P    K  NL+ L LS N++  LP+ I     L  L    N LTA  +PK++  L+NL+
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTA--IPKEIGQLQNLQ 144

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
             NL+ NQL   P  I  +  L+ LYLG+N  N + +EI +L  L  L L  N L  +P 
Sbjct: 145 ELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPK 204

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS----- 244
             G L  LE+L L  NQL  LP  I  L+ L+ L L NN+L TLP EI  L+ L      
Sbjct: 205 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 245 --------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                         + L+ L L+ N+L TLP EI  L+ L EL L  N L+
Sbjct: 265 KNKLTTLPEEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLI 315



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/207 (36%), Positives = 102/207 (49%), Gaps = 29/207 (14%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-------------- 102
           N+++L L HN L+  P    +  NL+ L L NN++T LP+ I                  
Sbjct: 211 NLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTT 270

Query: 103 ----------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                     L  L    N LT  +LPK++  L+NL+  +L GNQL   P  I  +  L+
Sbjct: 271 LPEEIGQLQNLQKLKLYENQLT--TLPKEIGQLQNLQELDLDGNQLITLPENIGQLQRLQ 328

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYLGNN LN +P ++ +L  L  L L  N L  +P   G L +L+ L L  NQL +LP 
Sbjct: 329 TLYLGNNQLNFLPNKVEQLQNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPE 388

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIIT 239
            I  LK LK L LHNN    LP+E I 
Sbjct: 389 EIKQLKNLKKLYLHNN---PLPSEKIA 412



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 124/226 (54%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L+  P    +  NL+ L+L++N++  LP+ I     L TL   +N   
Sbjct: 118 QNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFN 177

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             S+ K++  L+NL+   L  NQL   P +I  +  L+ L L +N LN +P+EI +L  L
Sbjct: 178 --SILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQLNVLPKEIGQLQNL 235

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  N LT +P   G L  L+ L+L+ N+L +LP  I  L+ L+ L L+ N+L TLP
Sbjct: 236 QILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPEEIGQLQNLQKLKLYENQLTTLP 295

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L+ L E    L L  N+L TLP  I  L+ L  L L +N L
Sbjct: 296 KEIGQLQNLQE----LDLDGNQLITLPENIGQLQRLQTLYLGNNQL 337



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 71/217 (32%), Positives = 105/217 (48%), Gaps = 31/217 (14%)

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMS 123
           Y+ N++    N     N+R L+LS +++T LP  I       L+  ++     +LPK++ 
Sbjct: 37  YYRNITEVLKNPQ---NVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLI-ALPKEIG 92

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            L+NL+  +LS NQL                         +P EI +L  L  L L  N 
Sbjct: 93  KLQNLQQLHLSKNQLM-----------------------ALPEEIGQLQNLQKLKLYENQ 129

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT IP   G L  L+ L L+ NQL +LP  I  L+ L++L L +N+  ++  EI  L   
Sbjct: 130 LTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQL--- 186

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            + L+SL L +N+L  LP EI  L+ L  L L  N L
Sbjct: 187 -QNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHNQL 222


>gi|326925538|ref|XP_003208970.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Meleagris gallopavo]
          Length = 735

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 89/228 (39%), Positives = 129/228 (56%), Gaps = 9/228 (3%)

Query: 57  NIDTLLLYHNNLSF-FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           N+DT    H NLSF   D   + T+L  L L++N++  L + +   P LS L   +N LT
Sbjct: 191 NLDTPEEAHQNLSFGAADRWWEQTDLTKLILASNQLQCLSEDVRLLPALSVLDVHDNQLT 250

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLP  +  L+NL+  ++S N+L+  P ++L +  LK L L +N L+H+P    +L  L
Sbjct: 251 --SLPSALGQLENLQKLDVSHNKLKSIPEELLQLSHLKSLLLQHNELSHLPDGFGQLVSL 308

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LTDIP +F  L  L  L L+ NQL++LPA IS +K LK L    N L T+P
Sbjct: 309 EELDLSNNHLTDIPTSFALLINLVRLNLACNQLKNLPADISAMKSLKQLDCTKNYLETVP 368

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           +E+ ++  L +    L L  NKLR+LP E+ + K L EL   +N + I
Sbjct: 369 SELASMASLEQ----LYLRKNKLRSLP-ELPSCKLLKELHAGENQIEI 411



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 113/227 (49%), Gaps = 9/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           EN+  L + HN L   P+   + ++L+SL L +N ++HLP        L  L   NN LT
Sbjct: 260 ENLQKLDVSHNKLKSIPEELLQLSHLKSLLLQHNELSHLPDGFGQLVSLEELDLSNNHLT 319

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P   + L NL   NL+ NQL+  P  I  + +LK L    N L  VP E+  +  L
Sbjct: 320 --DIPTSFALLINLVRLNLACNQLKNLPADISAMKSLKQLDCTKNYLETVPSELASMASL 377

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS-ISNLKMLKSLLLHNNKLRTL 233
             L L  N L  +P+       L+ L   +NQ+E L A  + +L  L  L L +NK++++
Sbjct: 378 EQLYLRKNKLRSLPE-LPSCKLLKELHAGENQIEILNAENLKHLNSLSVLELRDNKIKSV 436

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P EI  L    +KL+ L L NN +  LP  +  L  L  L+L  NPL
Sbjct: 437 PDEITLL----QKLERLDLANNDISRLPYTLGNLSQLKFLALEGNPL 479



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 97/199 (48%), Gaps = 12/199 (6%)

Query: 74  NASKFTNLRSLDLSNNRITHLPQ----AITNFPLSTLIARNNLLTAESLPKDMSNLKN-L 128
           N    T L+ L+ S  +   +P     A+ + P++++    N LTA  +P  +  LK+ +
Sbjct: 527 NMHAITTLKLLEFSEKQAAVIPDDMFNAVRSNPVTSVNFSKNQLTA--IPPRIVELKDSV 584

Query: 129 KVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
              N   N++    +++  +  L +L + NN L  +P E+  L +L V++L  N     P
Sbjct: 585 CDVNFGFNKISSVSLELCTLHKLTHLDIRNNVLTSLPEEMEALTRLQVINLSFNRFKVFP 644

Query: 189 DTFGDLYQLEALILSDNQLESL-PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
                +  LE ++LS+NQ+ S+ P  +  ++ L +L L NN L  +P E+       E L
Sbjct: 645 SVLYRILTLETILLSNNQVGSVDPLQLKKMEQLGTLDLQNNDLLQVPPELGN----CETL 700

Query: 248 KSLLLHNNKLRTLPTEIIT 266
           ++LLL  N  RT    I+ 
Sbjct: 701 RTLLLEGNPFRTPRAAILA 719



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 102/206 (49%), Gaps = 19/206 (9%)

Query: 115 AESLPKDMSNLKN---LKVFNLSGNQLEQFPIQILDIP-TLKYLYLGNNSLNHVPREINK 170
           A  +P DM N      +   N S NQL   P +I+++  ++  +  G N ++ V  E+  
Sbjct: 544 AAVIPDDMFNAVRSNPVTSVNFSKNQLTAIPPRIVELKDSVCDVNFGFNKISSVSLELCT 603

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L KL  L +  N LT +P+    L +L+ + LS N+ +  P+ +  +  L+++LL NN++
Sbjct: 604 LHKLTHLDIRNNVLTSLPEEMEALTRLQVINLSFNRFKVFPSVLYRILTLETILLSNNQV 663

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTY 290
            ++  + + LK + E+L +L L NN L  +P E+   + L  L L  NP          +
Sbjct: 664 GSV--DPLQLKKM-EQLGTLDLQNNDLLQVPPELGNCETLRTLLLEGNP----------F 710

Query: 291 KPPSLLELASRTLKVHEIDYSQEHLP 316
           + P    LA  T  V  ++Y +  +P
Sbjct: 711 RTPRAAILAKGTAAV--LEYLRSRIP 734



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 7/125 (5%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNN---LLTAESLPKDM 122
           N L   P   +   +L  L L  N++  LP+  +   L  L A  N   +L AE+L    
Sbjct: 362 NYLETVPSELASMASLEQLYLRKNKLRSLPELPSCKLLKELHAGENQIEILNAENL---- 417

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
            +L +L V  L  N+++  P +I  +  L+ L L NN ++ +P  +  L +L  L+L GN
Sbjct: 418 KHLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANNDISRLPYTLGNLSQLKFLALEGN 477

Query: 183 SLTDI 187
            L  I
Sbjct: 478 PLRAI 482


>gi|258545585|ref|ZP_05705819.1| small GTP-binding protein [Cardiobacterium hominis ATCC 15826]
 gi|258519285|gb|EEV88144.1| small GTP-binding protein [Cardiobacterium hominis ATCC 15826]
          Length = 430

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/242 (37%), Positives = 130/242 (53%), Gaps = 11/242 (4%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           Q+E LP  D   K   +  L L +N ++  P+  + F ++  LDLS+NR+  +P  + NF
Sbjct: 109 QLETLP--DSFAKLTGLTKLELGYNKMTSLPEVLTAFNHITELDLSDNRLLRVPLFLGNF 166

Query: 102 P-LSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
             L+ L +ARN L   E+LP   +NL  L   NLSGN+L+Q P  I +   L  L +  N
Sbjct: 167 TRLTKLNLARNKL---ENLPPVCANLTQLTRLNLSGNELKQLPDFIANFSQLSELEISGN 223

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L  +P  I +L +LH L + GN LT +P+T GDL  L  L + +N+L SLPA+  NL  
Sbjct: 224 QLGSLPEYIGRLKELHHLDISGNMLTTLPETLGDLQNLSILDIHNNRLTSLPANFGNLGQ 283

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L  L L +N+L  LP     +    ++L  L L +N+L  LP  I     L++L L  N 
Sbjct: 284 LHRLSLAHNQLSLLPPPAAQM----QRLAVLDLSHNRLMQLPNFICQFSHLNDLHLGYNE 339

Query: 280 LV 281
           L 
Sbjct: 340 LT 341



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/179 (35%), Positives = 91/179 (50%), Gaps = 3/179 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L   P+   +   L  LD+S N +T LP+ + +   LS L   NN LT  SLP +  N
Sbjct: 223 NQLGSLPEYIGRLKELHHLDISGNMLTTLPETLGDLQNLSILDIHNNRLT--SLPANFGN 280

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L  L   +L+ NQL   P     +  L  L L +N L  +P  I +   L+ L LG N L
Sbjct: 281 LGQLHRLSLAHNQLSLLPPPAAQMQRLAVLDLSHNRLMQLPNFICQFSHLNDLHLGYNEL 340

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           T++PD  G L +LE L ++ N + +LP S++NL  +  L L + ++  LP  I  L  L
Sbjct: 341 TELPDDIGLLTELEVLNIAHNNIGALPPSVANLTKMTRLDLSSTQIPYLPKFISNLNRL 399



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/196 (32%), Positives = 98/196 (50%), Gaps = 5/196 (2%)

Query: 37  ETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQ 96
           E    Q+  LP  +Y  + + +  L +  N L+  P+      NL  LD+ NNR+T LP 
Sbjct: 219 EISGNQLGSLP--EYIGRLKELHHLDISGNMLTTLPETLGDLQNLSILDIHNNRLTSLPA 276

Query: 97  AITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLY 155
              N   L  L   +N L+   LP   + ++ L V +LS N+L Q P  I     L  L+
Sbjct: 277 NFGNLGQLHRLSLAHNQLSL--LPPPAAQMQRLAVLDLSHNRLMQLPNFICQFSHLNDLH 334

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           LG N L  +P +I  L +L VL++  N++  +P +  +L ++  L LS  Q+  LP  IS
Sbjct: 335 LGYNELTELPDDIGLLTELEVLNIAHNNIGALPPSVANLTKMTRLDLSSTQIPYLPKFIS 394

Query: 216 NLKMLKSLLLHNNKLR 231
           NL  L  L + N +++
Sbjct: 395 NLNRLCILDVRNTRMK 410



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 72/212 (33%), Positives = 99/212 (46%), Gaps = 7/212 (3%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFPLST-LIARNNLLTAESLPKDMSNLKNLK 129
            P   S+   L  LDLS  R+  LP+ +    L T L  R N L  +SLP  + +L  L+
Sbjct: 44  IPREPSELIGLNRLDLSFRRLQSLPETLGELALLTELDLRGNEL--KSLPASIGDLSLLR 101

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
             +L  NQLE  P     +  L  L LG N +  +P  +     +  L L  N L  +P 
Sbjct: 102 RLDLKWNQLETLPDSFAKLTGLTKLELGYNKMTSLPEVLTAFNHITELDLSDNRLLRVPL 161

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
             G+  +L  L L+ N+LE+LP   +NL  L  L L  N+L+ LP  I     LSE    
Sbjct: 162 FLGNFTRLTKLNLARNKLENLPPVCANLTQLTRLNLSGNELKQLPDFIANFSQLSE---- 217

Query: 250 LLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L +  N+L +LP  I  LK L  L +  N L 
Sbjct: 218 LEISGNQLGSLPEYIGRLKELHHLDISGNMLT 249



 Score = 65.1 bits (157), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 88/196 (44%), Gaps = 16/196 (8%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           +SLP+ +  L  L   +L GN+L+  P  I D+  L+ L L  N L  +P    KL  L 
Sbjct: 65  QSLPETLGELALLTELDLRGNELKSLPASIGDLSLLRRLDLKWNQLETLPDSFAKLTGLT 124

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L LG N +T +P+       +  L LSDN+L  +P  + N   L  L L  NKL  LP 
Sbjct: 125 KLELGYNKMTSLPEVLTAFNHITELDLSDNRLLRVPLFLGNFTRLTKLNLARNKLENLPP 184

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
               L     +L  L L  N+L+ LP  I     LSEL +  N L             SL
Sbjct: 185 VCANLT----QLTRLNLSGNELKQLPDFIANFSQLSELEISGNQL------------GSL 228

Query: 296 LELASRTLKVHEIDYS 311
            E   R  ++H +D S
Sbjct: 229 PEYIGRLKELHHLDIS 244



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/131 (37%), Positives = 72/131 (54%), Gaps = 4/131 (3%)

Query: 151 LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           LK+    N   + +PRE ++L  L+ L L    L  +P+T G+L  L  L L  N+L+SL
Sbjct: 31  LKWAEDNNIGEDRIPREPSELIGLNRLDLSFRRLQSLPETLGELALLTELDLRGNELKSL 90

Query: 211 PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
           PASI +L +L+ L L  N+L TLP     L  L++    L L  NK+ +LP  +     +
Sbjct: 91  PASIGDLSLLRRLDLKWNQLETLPDSFAKLTGLTK----LELGYNKMTSLPEVLTAFNHI 146

Query: 271 SELSLRDNPLV 281
           +EL L DN L+
Sbjct: 147 TELDLSDNRLL 157


>gi|260788682|ref|XP_002589378.1| hypothetical protein BRAFLDRAFT_77821 [Branchiostoma floridae]
 gi|229274555|gb|EEN45389.1| hypothetical protein BRAFLDRAFT_77821 [Branchiostoma floridae]
          Length = 1059

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 119/223 (53%), Gaps = 4/223 (1%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L +Y+N LS FP    K   LR L + +N++T +P  + + P L  L   NN L+ 
Sbjct: 341 NLEVLSVYNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLEVLSVYNNKLS- 399

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            + P  +  L+ L+   +  NQL + P  +  +P L+ L +GNN L+  P  + KL KL 
Sbjct: 400 -TFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLELLTVGNNKLSKFPPGVEKLQKLR 458

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L + GN LT++P +   L  LE L + +N+L + P  +  L+ LKSL +  ++    P 
Sbjct: 459 KLYIYGNQLTEVPSSVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLKSLSVPASQFDEFPR 518

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           +++ LK L E+L +      K   +P E+  L+ L  L+L +N
Sbjct: 519 QVLQLKTL-EELYAGQAGGRKFDIVPDEVGNLQHLWFLALENN 560



 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 124/251 (49%), Gaps = 31/251 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L + +N LS FP    K   LR L + +N++T +P  + + P L  L   NN L+A
Sbjct: 175 NLEELDVSNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLELLTVGNNKLSA 234

Query: 116 --------------------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIP 149
                                      + P  +  L+ L+   +  NQL + P  +  +P
Sbjct: 235 FPPGVEKLQKLRELYIYGVKCHNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLP 294

Query: 150 TLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            L+ L +GNN L+  P  + KL KL  L + GN LT++P +   L  LE L + +N+L +
Sbjct: 295 HLELLTVGNNKLSKFPPGVEKLQKLRKLYIYGNQLTEVPSSVCSLPNLEVLSVYNNKLST 354

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
            P  +  L+ L+ L + +N+L  +P+ + +L      L+ L ++NNKL T P  +  L+ 
Sbjct: 355 FPPGVEKLQKLRELYIQDNQLTEVPSGVCSLP----HLEVLSVYNNKLSTFPPGVEKLQK 410

Query: 270 LSELSLRDNPL 280
           L EL ++DN L
Sbjct: 411 LRELYIQDNQL 421



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 84/313 (26%), Positives = 149/313 (47%), Gaps = 40/313 (12%)

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDM 122
           ++N LS FP    K   LR L + +N++T +P  + + P L  L   NN L+    P  +
Sbjct: 256 HNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLELLTVGNNKLS--KFPPGV 313

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             L+ L+   + GNQL + P  +  +P L+ L + NN L+  P  + KL KL  L +  N
Sbjct: 314 EKLQKLRKLYIYGNQLTEVPSSVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLRELYIQDN 373

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            LT++P     L  LE L + +N+L + P  +  L+ L+ L + +N+L  +P+ + +L  
Sbjct: 374 QLTEVPSGVCSLPHLEVLSVYNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPH 433

Query: 243 LS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
           L                    +KL+ L ++ N+L  +P+ + +L  L  LS+ +N L   
Sbjct: 434 LELLTVGNNKLSKFPPGVEKLQKLRKLYIYGNQLTEVPSSVCSLPNLEVLSVYNNKL--- 490

Query: 284 FVSDMTYKPPSLLELASRTLKVHEIDYSQ-EHLPQNLVQYLESAHHCVNPKCKGVFFD-- 340
                +  PP + +L  + LK   +  SQ +  P+ ++Q L++       +  G  FD  
Sbjct: 491 -----STFPPGVEKL--QKLKSLSVPASQFDEFPRQVLQ-LKTLEELYAGQAGGRKFDIV 542

Query: 341 ----NRIEHIKFV 349
                 ++H+ F+
Sbjct: 543 PDEVGNLQHLWFL 555



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/274 (29%), Positives = 127/274 (46%), Gaps = 41/274 (14%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           +++ L +Y+N LS FP    K   LR L + +N++T +P  + + P L  L   NN L+ 
Sbjct: 387 HLEVLSVYNNKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLELLTVGNNKLS- 445

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
              P  +  L+ L+   + GNQL + P  +  +P L+ L + NN L+  P  + KL KL 
Sbjct: 446 -KFPPGVEKLQKLRKLYIYGNQLTEVPSSVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLK 504

Query: 176 VLSL--------------------------GGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            LS+                          GG     +PD  G+L  L  L L +N L +
Sbjct: 505 SLSVPASQFDEFPRQVLQLKTLEELYAGQAGGRKFDIVPDEVGNLQHLWFLALENNLLRT 564

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           LP+++S+L  L+ + L NNK  T P E++   C    ++ L + NN +  LPT +     
Sbjct: 565 LPSTMSHLHNLRVVQLWNNKFDTFP-EVL---CELPAMEKLDIRNNNITRLPTALHRADK 620

Query: 270 LSELSLRDNPLVIRFVSDMTYKPPSLLELASRTL 303
           L +L +  NPL        TY P  + E  +  +
Sbjct: 621 LKDLDVSGNPL--------TYPPQDVCEQGTGAI 646



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 136/280 (48%), Gaps = 53/280 (18%)

Query: 52  NKKPENIDTLL---LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLI 107
           N +P+ ++  L   L +  L+  P+     T+L  LD+SNN+I  +P+AI     L  L 
Sbjct: 6   NLQPQTVNGRLKLDLSNQGLTSIPEEVFDITDLEILDVSNNKIISIPEAICRLQKLYRLD 65

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE 167
           A +N+LT  SLP+ +S+L+ LK   +  N L + P  + D+  L++L++ +N L  +P +
Sbjct: 66  AYSNMLT--SLPQAISSLQGLKKLYVHSNNLSELPDGLEDLQKLEWLWVKDNKLTKLPTK 123

Query: 168 I-----------------------NKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD 204
           I                        KL KL  L + GN LT++P     L  LE L +S+
Sbjct: 124 IFSCLNLVNFDASNNKLSAFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEELDVSN 183

Query: 205 NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS-------------------E 245
           N+L + P  +  L+ L+ L + +N+L  +P+ + +L  L                    +
Sbjct: 184 NKLSTFPPGVEKLQKLRELYIQDNQLTEVPSGVCSLPHLELLTVGNNKLSAFPPGVEKLQ 243

Query: 246 KLKSLLL-----HNNKLRTLPTEIITLKCLSELSLRDNPL 280
           KL+ L +     HNNKL T P  +  L+ L EL ++DN L
Sbjct: 244 KLRELYIYGVKCHNNKLSTFPPGVEKLQKLRELYIQDNQL 283



 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 71/233 (30%), Positives = 119/233 (51%), Gaps = 13/233 (5%)

Query: 48  NNDYNKKPENIDTL------LLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           NN  +K P  ++ L       +Y N L+  P +     NL  L + NN+++  P  +   
Sbjct: 303 NNKLSKFPPGVEKLQKLRKLYIYGNQLTEVPSSVCSLPNLEVLSVYNNKLSTFPPGVEKL 362

Query: 102 -PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
             L  L  ++N LT   +P  + +L +L+V ++  N+L  FP  +  +  L+ LY+ +N 
Sbjct: 363 QKLRELYIQDNQLT--EVPSGVCSLPHLEVLSVYNNKLSTFPPGVEKLQKLRELYIQDNQ 420

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  VP  +  L  L +L++G N L+  P     L +L  L +  NQL  +P+S+ +L  L
Sbjct: 421 LTEVPSGVCSLPHLELLTVGNNKLSKFPPGVEKLQKLRKLYIYGNQLTEVPSSVCSLPNL 480

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           + L ++NNKL T P  +  L    +KLKSL +  ++    P +++ LK L EL
Sbjct: 481 EVLSVYNNKLSTFPPGVEKL----QKLKSLSVPASQFDEFPRQVLQLKTLEEL 529


>gi|166240580|ref|XP_643190.2| Ras guanine nucleotide exchange factor [Dictyostelium discoideum
           AX4]
 gi|259647520|sp|B0M0P8.1|GEFL_DICDI RecName: Full=Ras guanine nucleotide exchange factor L; AltName:
           Full=RasGEF domain-containing protein L
 gi|118640266|gb|AAN46881.2| nucleotide exchange factor RasGEF L [Dictyostelium discoideum]
 gi|165988669|gb|EAL69266.2| Ras guanine nucleotide exchange factor [Dictyostelium discoideum
           AX4]
          Length = 2356

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/244 (37%), Positives = 129/244 (52%), Gaps = 31/244 (12%)

Query: 62  LLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLP----------------QAITNFP--- 102
           +L +N+++ F  + SK T LR LDLS N++  +P                   +NFP   
Sbjct: 99  ILPNNDIAKFQVSISKLTTLRLLDLSGNQLGTIPVRLFSLVSMRELYLDENQFSNFPSHL 158

Query: 103 -----LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
                L+TL   NNLL  +S+P  +  +  LK   LSGNQ+E  P++I ++ +L +L   
Sbjct: 159 CELQKLTTLGFSNNLL--KSIPTQIGQMIGLKKLILSGNQMESIPMEISNLKSLTHLDCS 216

Query: 158 NNSLNHVPREI-NKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
           +N L+ +P E+ NKL +L  L L  N L  IPD  G    L +L L++N +  LP SI  
Sbjct: 217 SNILSSIPNELGNKLSQLSFLFLQHNKLRSIPDEIGQCQSLVSLRLNNNSITLLPQSIGE 276

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           L+ L+ L L  N+L TLP+E+    C S  LK L L  NKL  LP     L CL+ LSL 
Sbjct: 277 LENLQELYLQENRLNTLPSELGN--CCS--LKKLYLEFNKLIALPDRFKRLHCLNVLSLH 332

Query: 277 DNPL 280
           DN L
Sbjct: 333 DNLL 336



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 121/241 (50%), Gaps = 12/241 (4%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTN-LRSLDLSNNRITHLPQAITNF 101
           I+L+ +N +      I  +++    L   P   S     L+ L + +N+I  +P      
Sbjct: 40  IKLMKDNGH------ITNVIIKSCRLKVLPGEISSLGGHLKKLHIEDNKIQEIPNLEQLE 93

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L  LI  NN +    +   +S L  L++ +LSGNQL   P+++  + +++ LYL  N  
Sbjct: 94  QLEELILPNNDIAKFQV--SISKLTTLRLLDLSGNQLGTIPVRLFSLVSMRELYLDENQF 151

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
           ++ P  + +L KL  L    N L  IP   G +  L+ LILS NQ+ES+P  ISNLK L 
Sbjct: 152 SNFPSHLCELQKLTTLGFSNNLLKSIPTQIGQMIGLKKLILSGNQMESIPMEISNLKSLT 211

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L   +N L ++P E   L     +L  L L +NKLR++P EI   + L  L L +N + 
Sbjct: 212 HLDCSSNILSSIPNE---LGNKLSQLSFLFLQHNKLRSIPDEIGQCQSLVSLRLNNNSIT 268

Query: 282 I 282
           +
Sbjct: 269 L 269



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/172 (32%), Positives = 84/172 (48%), Gaps = 6/172 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN--FPLSTLIARNNLLTAESL 118
           L+L  N +   P   S   +L  LD S+N ++ +P  + N    LS L  ++N L   S+
Sbjct: 190 LILSGNQMESIPMEISNLKSLTHLDCSSNILSSIPNELGNKLSQLSFLFLQHNKL--RSI 247

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P ++   ++L    L+ N +   P  I ++  L+ LYL  N LN +P E+   C L  L 
Sbjct: 248 PDEIGQCQSLVSLRLNNNSITLLPQSIGELENLQELYLQENRLNTLPSELGNCCSLKKLY 307

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLP--ASISNLKMLKSLLLHNN 228
           L  N L  +PD F  L+ L  L L DN L+ LP   S+   + L    +HNN
Sbjct: 308 LEFNKLIALPDRFKRLHCLNVLSLHDNLLDDLPNFLSLEFSQHLIRFTIHNN 359


>gi|449283629|gb|EMC90234.1| Leucine-rich repeat-containing protein 1, partial [Columba livia]
          Length = 471

 Score =  114 bits (284), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 117/209 (55%), Gaps = 7/209 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTA 115
           N+ +L L  N L++ P++ ++   L  LDL NN + HLP+ I   F L  L    N LT 
Sbjct: 99  NLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLT- 157

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+++ NLKNL   ++S N+LE  P +I  + +L  L +  N L  +P  I KL +L 
Sbjct: 158 -EIPQEVGNLKNLLCLDVSENKLECLPEEISGLTSLTDLLVSQNLLQVLPDGIGKLRRLS 216

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N L  + D+ GD   L  L+L++NQL+SLP SI  LK L +L    NKL +LP 
Sbjct: 217 ILKVDQNKLIQLTDSIGDCESLTELVLTENQLQSLPKSIGRLKKLNNLNADRNKLTSLPK 276

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           EI    C S  L    + +N+L  +P+EI
Sbjct: 277 EIG--GCCS--LNVFSVRDNRLSRIPSEI 301



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 126/261 (48%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      L  N++   P++ S    L+  D S N +T LP++  
Sbjct: 13  LSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCRALQVADFSGNPLTRLPESFP 72

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + ++LP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 73  ELQNLTCLSVNDI-SLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLEELDLGNN 131

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L H+P  I  L  L  L L GN LT+IP   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 132 ELYHLPETIGALFNLKDLWLDGNQLTEIPQEVGNLKNLLCLDVSENKLECLPEEISGLTS 191

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTL 260
           L  LL+  N L+ LP  I  L+ LS                   E L  L+L  N+L++L
Sbjct: 192 LTDLLVSQNLLQVLPDGIGKLRRLSILKVDQNKLIQLTDSIGDCESLTELVLTENQLQSL 251

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK L+ L+   N L 
Sbjct: 252 PKSIGRLKKLNNLNADRNKLT 272



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 80/157 (50%), Gaps = 4/157 (2%)

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L  L+   LS N++++ P +I +   L  L L  N +  +P  I+    L V    GN L
Sbjct: 5   LVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCRALQVADFSGNPL 64

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T +P++F +L  L  L ++D  L++LP +I NL  L SL L  N L  LP  +  L    
Sbjct: 65  TRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQL---- 120

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           ++L+ L L NN+L  LP  I  L  L +L L  N L 
Sbjct: 121 QRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLT 157



 Score = 39.3 bits (90), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 43/151 (28%), Positives = 64/151 (42%), Gaps = 34/151 (22%)

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS------ 244
           F  L +L  L LSDN+++ LP  I+N   L  L L  N +  +P  I   + L       
Sbjct: 2   FFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCRALQVADFSG 61

Query: 245 -------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYK 291
                        + L  L +++  L+ LP  I  L  L+ L LR+N L        TY 
Sbjct: 62  NPLTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLL--------TYL 113

Query: 292 PPSLLELASRTLKVHEIDYSQE---HLPQNL 319
           P SL +L     ++ E+D       HLP+ +
Sbjct: 114 PESLAQLQ----RLEELDLGNNELYHLPETI 140


>gi|418700552|ref|ZP_13261494.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410760453|gb|EKR26649.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 260

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/222 (38%), Positives = 115/222 (51%), Gaps = 43/222 (19%)

Query: 79  TNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           T++++LDLSNN++                         +LPK++  LK L+  +LS NQL
Sbjct: 40  TDVQTLDLSNNKLI------------------------TLPKEIGQLKELEWLSLSKNQL 75

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
           +  P +I  +  L+YLYL +N L  +P+EI  L +L  L L  N LT +P     L  LE
Sbjct: 76  KTLPKEIEQLQKLRYLYLSDNQLTTLPKEIGYLKELQELDLSRNQLTTLPKEIEYLKDLE 135

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE------------- 245
           +L L +NQL +LP  I  LK L+ L L NN+L TLP EI  LK L E             
Sbjct: 136 SLNLINNQLTTLPKEIGQLKELQVLDLSNNQLTTLPNEIEFLKRLQELYLRNNQLTALSK 195

Query: 246 ------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                 KL+ L L  N+L TLP EI TLK L EL L D P++
Sbjct: 196 GIEYLKKLQKLDLSRNQLTTLPKEIETLKKLEELFLDDIPVL 237



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/166 (44%), Positives = 99/166 (59%), Gaps = 4/166 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++L K + N  +++  +LS N+L   P +I  +  L++L L  N L  +P+EI +L KL 
Sbjct: 30  QNLTKALKNPTDVQTLDLSNNKLITLPKEIGQLKELEWLSLSKNQLKTLPKEIEQLQKLR 89

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +P   G L +L+ L LS NQL +LP  I  LK L+SL L NN+L TLP 
Sbjct: 90  YLYLSDNQLTTLPKEIGYLKELQELDLSRNQLTTLPKEIEYLKDLESLNLINNQLTTLPK 149

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           EI  LK    +L+ L L NN+L TLP EI  LK L EL LR+N L 
Sbjct: 150 EIGQLK----ELQVLDLSNNQLTTLPNEIEFLKRLQELYLRNNQLT 191



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 99/204 (48%), Gaps = 18/204 (8%)

Query: 23  SIKTLDF-SYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
            +K L++ S S    +TL  +IE L    Y         L L  N L+  P        L
Sbjct: 61  QLKELEWLSLSKNQLKTLPKEIEQLQKLRY---------LYLSDNQLTTLPKEIGYLKEL 111

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           + LDLS N++T LP+ I     L +L   NN LT  +LPK++  LK L+V +LS NQL  
Sbjct: 112 QELDLSRNQLTTLPKEIEYLKDLESLNLINNQLT--TLPKEIGQLKELQVLDLSNNQLTT 169

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +I  +  L+ LYL NN L  + + I  L KL  L L  N LT +P     L +LE L
Sbjct: 170 LPNEIEFLKRLQELYLRNNQLTALSKGIEYLKKLQKLDLSRNQLTTLPKEIETLKKLEEL 229

Query: 201 ILSDNQLESLPASISNLKMLKSLL 224
            L D     +P   S  K ++ LL
Sbjct: 230 FLDD-----IPVLKSQEKKIQKLL 248


>gi|398339753|ref|ZP_10524456.1| putative lipoprotein [Leptospira kirschneri serovar Bim str. 1051]
          Length = 448

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/227 (37%), Positives = 121/227 (53%), Gaps = 5/227 (2%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLL 113
           K +N+  L L  N L+  PD   +  NL+ L+L  N++T LP+ I       ++  N   
Sbjct: 115 KLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLNLNK 174

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP+ +  L+NL++ N  GNQL  FP +I  +  L+ L LG N L  +  E+ +L  
Sbjct: 175 LT-ILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQN 233

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P   G L +L+ L L   QL++LP  I  L+ L+ L L+   L  L
Sbjct: 234 LQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTIL 293

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P EI  L     KL+ L L+ N+L TLP EI  LK L EL L +NPL
Sbjct: 294 PKEIGQLS----KLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPL 336



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/246 (34%), Positives = 126/246 (51%), Gaps = 22/246 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L    N L+ FP    +   L+ L+L  NR+T L + +     L  L   +N LT
Sbjct: 186 QNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLT 245

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+ L+  NL G QL+  P  I+ +  L+ L L    L  +P+EI +L KL
Sbjct: 246 --TLPKEIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKL 303

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L GN LT +P+  G L +L+ L L +N L +LP  I  L+ L++L L  N++ T P
Sbjct: 304 QKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFP 363

Query: 235 TEIITLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            EI  L+ L E                    L+ L L  N+L TLP E+  L+ L +L+L
Sbjct: 364 KEIGQLQNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNL 423

Query: 276 RDNPLV 281
            +NP+ 
Sbjct: 424 YNNPIA 429



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 93/190 (48%), Gaps = 33/190 (17%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +L K++  L+NL+   L+ NQL   P +I  +  L+ L L +N L  +P+EI KL  L V
Sbjct: 62  TLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQV 121

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS--------------------- 215
           L+LG N LT +PD  G L  L+ L L  N+L  LP  I                      
Sbjct: 122 LNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLNLNKLTILPEK 181

Query: 216 -----NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
                NL++L S     N+L T P EI  L    +KL+ L L  N+L TL  E++ L+ L
Sbjct: 182 IGQLQNLQILNS---QGNQLTTFPKEIGQL----QKLQELNLGFNRLTTLREEVVQLQNL 234

Query: 271 SELSLRDNPL 280
             L L  NPL
Sbjct: 235 QILDLISNPL 244


>gi|421129287|ref|ZP_15589488.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410359483|gb|EKP06581.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 448

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 86/227 (37%), Positives = 121/227 (53%), Gaps = 5/227 (2%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLL 113
           K +N+  L L  N L+  PD   +  NL+ L+L  N++T LP+ I       ++  N   
Sbjct: 115 KLQNLQVLNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLNLNK 174

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP+ +  L+NL++ N  GNQL  FP +I  +  L+ L LG N L  +  E+ +L  
Sbjct: 175 LT-ILPEKIGQLQNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQN 233

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N LT +P   G L +L+ L L   QL++LP  I  L+ L+ L L+   L  L
Sbjct: 234 LQILDLISNPLTTLPKEIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTIL 293

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P EI  L     KL+ L L+ N+L TLP EI  LK L EL L +NPL
Sbjct: 294 PKEIGQLS----KLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPL 336



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 85/246 (34%), Positives = 126/246 (51%), Gaps = 22/246 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L    N L+ FP    +   L+ L+L  NR+T L + +     L  L   +N LT
Sbjct: 186 QNLQILNSQGNQLTTFPKEIGQLQKLQELNLGFNRLTTLREEVVQLQNLQILDLISNPLT 245

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+ L+  NL G QL+  P  I+ +  L+ L L    L  +P+EI +L KL
Sbjct: 246 --TLPKEIGQLQKLQELNLYGIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKL 303

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L GN LT +P+  G L +L+ L L +N L +LP  I  L+ L++L L  N++ T P
Sbjct: 304 QKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLYLEGNQITTFP 363

Query: 235 TEIITLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            EI  LK L E                    L+ L L  N+L TLP E+  L+ L +L+L
Sbjct: 364 KEIGQLKNLQELNLGFNQLTTLPQEIGQLQNLQELNLEFNQLATLPKEVGQLQKLRKLNL 423

Query: 276 RDNPLV 281
            +NP+ 
Sbjct: 424 YNNPIA 429



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/190 (35%), Positives = 93/190 (48%), Gaps = 33/190 (17%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +L K++  L+NL+   L+ NQL   P +I  +  L+ L L +N L  +P+EI KL  L V
Sbjct: 62  TLSKEIGKLQNLQKLYLNYNQLTTLPNEIGQLQNLQVLDLYSNELTILPKEIGKLQNLQV 121

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS--------------------- 215
           L+LG N LT +PD  G L  L+ L L  N+L  LP  I                      
Sbjct: 122 LNLGFNRLTILPDEVGQLQNLQVLNLDLNKLTILPEKIGQLQNLQVLNLNLNKLTILPEK 181

Query: 216 -----NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
                NL++L S     N+L T P EI  L    +KL+ L L  N+L TL  E++ L+ L
Sbjct: 182 IGQLQNLQILNS---QGNQLTTFPKEIGQL----QKLQELNLGFNRLTTLREEVVQLQNL 234

Query: 271 SELSLRDNPL 280
             L L  NPL
Sbjct: 235 QILDLISNPL 244


>gi|421119264|ref|ZP_15579588.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410347894|gb|EKO98745.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
          Length = 526

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/213 (39%), Positives = 117/213 (54%), Gaps = 5/213 (2%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKV 130
           FP    KF NLR L+L +   + LP+ I+       +A   L   +++P ++  LKNL+ 
Sbjct: 299 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALG-LNGLKNIPSEIGQLKNLEA 357

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NL  N+LE+ P +I  +  L+ L L  N+L   P EI +L KL  L L  N  T  P  
Sbjct: 358 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 417

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
            G L  L+ L L  NQL +L A I  LK L+ L L++N+   LP EI  LK    KL++L
Sbjct: 418 IGKLENLQTLNLQRNQLTNLTAEIEQLKNLQELDLNDNQFTVLPKEIGKLK----KLQTL 473

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
            L NN+L TLPTEI  L+ L  L L++N L ++
Sbjct: 474 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLK 506



 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/205 (40%), Positives = 116/205 (56%), Gaps = 7/205 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           ++R L+LS  ++T LP+ I     L  L  + NLLT   LPK++  L+NL+  +L  NQL
Sbjct: 49  DVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTV--LPKEIGQLENLQELDLRDNQL 106

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
             FP  I+++  L+ L L  N L  +P EI +L  L  L L  N LT  P   G L  L+
Sbjct: 107 ATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQ 166

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L LS+N+L +LP  I  LK L++L L +N+  TLP EI  L    + L++L L NN+L 
Sbjct: 167 KLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLPKEIGQL----QNLQTLNLVNNRLT 222

Query: 259 TLPTEIITLKCLSELSLRDNPLVIR 283
             P EI  L+ L +L L  NPL ++
Sbjct: 223 VFPKEIGQLQNLQDLELLMNPLSLK 247



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 111/221 (50%), Gaps = 11/221 (4%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N+  L LY    S  P   S+  NL+ L L  N + ++P  I     L  L    N 
Sbjct: 305 KFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE 364

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L  E LPK++  L+NL+  +L  N L+ FP +I  +  L+ L L  N     P+EI KL 
Sbjct: 365 L--ERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLE 422

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L+L  N LT++      L  L+ L L+DNQ   LP  I  LK L++L L NN+L T
Sbjct: 423 NLQTLNLQRNQLTNLTAEIEQLKNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTT 482

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTE----IITLKC 269
           LPTEI  L    + L+ L L NN+L     E    ++ LKC
Sbjct: 483 LPTEIGQL----QNLQWLYLQNNQLSLKEQERIRKLLPLKC 519



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 87/278 (31%), Positives = 118/278 (42%), Gaps = 55/278 (19%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN--------------- 100
           +N+ TL L  N  +  P    +  NL++L+L NNR+T  P+ I                 
Sbjct: 186 KNLQTLDLQDNQFTTLPKEIGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLS 245

Query: 101 ----------FPLSTL----IARNNLLT----------------------AESLPKDMSN 124
                     FP S L    +A N +                        ++S PK +  
Sbjct: 246 LKERKRIQKLFPDSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILK 305

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
            +NL+  NL        P +I  +  LKYL LG N L ++P EI +L  L  L+L  N L
Sbjct: 306 FRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANEL 365

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
             +P   G L  L+ L L  N L+  PA I  LK L+ L L  N+  T P EI  L    
Sbjct: 366 ERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKL---- 421

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           E L++L L  N+L  L  EI  LK L EL L DN   +
Sbjct: 422 ENLQTLNLQRNQLTNLTAEIEQLKNLQELDLNDNQFTV 459



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 89/165 (53%), Gaps = 4/165 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLSG +L   P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 36  TYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLEN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L   P    +L +LE+L LS+N+L  LP  I  L+ L+ L L+ NKL T 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P EI  L    + L+ L L  N+L  LP EI  LK L  L L+DN
Sbjct: 156 PKEIGQL----QNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDN 196



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 89/257 (34%), Positives = 120/257 (46%), Gaps = 36/257 (14%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L+ FP    +  NL+ L LS NR+T LP+ I     L TL  ++N  T
Sbjct: 140 QNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFT 199

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL------------- 161
             +LPK++  L+NL+  NL  N+L  FP +I  +  L+ L L  N L             
Sbjct: 200 --TLPKEIGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFP 257

Query: 162 -----------NHVPREIN----KLCKLHVLSLGGNSLTD-IPDTFGDLYQLEALILSDN 205
                      N V R +N    +  K+  LSL     +   P        L  L L D 
Sbjct: 258 DSNLDLREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDC 317

Query: 206 QLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
              +LP  IS LK LK L L  N L+ +P+EI  LK     L++L L  N+L  LP EI 
Sbjct: 318 GFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLK----NLEALNLEANELERLPKEIG 373

Query: 266 TLKCLSELSLRDNPLVI 282
            L+ L +LSL  N L I
Sbjct: 374 QLRNLQKLSLHQNTLKI 390



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 59/177 (33%), Positives = 89/177 (50%), Gaps = 5/177 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLL 113
           +N+  L L  N L+  P    +  NL+ LDL +N++   P  I     L +L ++ N L+
Sbjct: 71  KNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLI 130

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L+NL+   L  N+L  FP +I  +  L+ L+L  N L  +P+EI +L  
Sbjct: 131 I---LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKN 187

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L L  N  T +P   G L  L+ L L +N+L   P  I  L+ L+ L L  N L
Sbjct: 188 LQTLDLQDNQFTTLPKEIGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPL 244



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 93/278 (33%), Positives = 117/278 (42%), Gaps = 59/278 (21%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI----------------T 99
           EN+  L L  N L+ FP    +   L SLDLS NR+  LP  I                T
Sbjct: 94  ENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLT 153

Query: 100 NFP--------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
            FP        L  L    N LTA  LPK++  LKNL+  +L  NQ    P +I  +  L
Sbjct: 154 TFPKEIGQLQNLQKLWLSENRLTA--LPKEIGQLKNLQTLDLQDNQFTTLPKEIGQLQNL 211

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT-----DIPDTFGD------------- 193
           + L L NN L   P+EI +L  L  L L  N L+      I   F D             
Sbjct: 212 QTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKLFPDSNLDLREVAENGV 271

Query: 194 -----LYQLEALILSDNQLE------SLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
                L Q E L + +  LE      S P  I   + L+ L L++    TLP EI  LK 
Sbjct: 272 YRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTLPKEISRLK- 330

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
               LK L L  N L+ +P+EI  LK L  L+L  N L
Sbjct: 331 ---NLKYLALGLNGLKNIPSEIGQLKNLEALNLEANEL 365



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 4/111 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+     +   +  L LS  +L +LP  I  LK L+ L L  N L 
Sbjct: 25  CEIQAEEVEPGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLT 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            LP EI  L    E L+ L L +N+L T P  I+ L+ L  L L +N L+I
Sbjct: 85  VLPKEIGQL----ENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLII 131


>gi|95113664|ref|NP_060684.4| leucine-rich repeat-containing protein 1 [Homo sapiens]
 gi|50401149|sp|Q9BTT6.1|LRRC1_HUMAN RecName: Full=Leucine-rich repeat-containing protein 1; AltName:
           Full=LANO adapter protein; AltName: Full=LAP and no PDZ
           protein
 gi|14582756|gb|AAK69623.1|AF332199_1 leucine-rich repeats protein [Homo sapiens]
 gi|14701834|gb|AAK72246.1|AF359380_1 LANO adaptor protein [Homo sapiens]
 gi|13112035|gb|AAH03193.1| Leucine rich repeat containing 1 [Homo sapiens]
 gi|119624835|gb|EAX04430.1| leucine rich repeat containing 1, isoform CRA_b [Homo sapiens]
 gi|157928286|gb|ABW03439.1| leucine rich repeat containing 1 [synthetic construct]
          Length = 524

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 117/209 (55%), Gaps = 7/209 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 211 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+  G+   L  L+L++NQL +LP SI  LK L +L    NKL +LP 
Sbjct: 270 ILKVDQNRLTQLPEAVGECESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPK 329

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           EI    C S  L    + +N+L  +P E+
Sbjct: 330 EIG--GCCS--LTVFCVRDNRLTRIPAEV 354



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/224 (36%), Positives = 115/224 (51%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN +  
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEI-- 94

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+ +S  K L+V + SGN L + P    ++  L  L + + SL  +P  I  L  L
Sbjct: 95  -PEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNL 153

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +PD+   L +LE L L +N++ +LP SI  L  LK L L  N+L  LP
Sbjct: 154 ASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELP 213

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK     L  L +  N+L  LP EI  L  L++L +  N
Sbjct: 214 QEIGNLK----NLLCLDVSENRLERLPEEISGLTSLTDLVISQN 253



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 122/242 (50%), Gaps = 11/242 (4%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N +   P++ S    L+  D S N +T LP++  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 126 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 185 EIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 244

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L  L++  N L T+P  I  LK    KL  L +  N+L  LP  +   + L+EL L +N 
Sbjct: 245 LTDLVISQNLLETIPDGIGKLK----KLSILKVDQNRLTQLPEAVGECESLTELVLTENQ 300

Query: 280 LV 281
           L+
Sbjct: 301 LL 302



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 8/203 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ S+D  +  + ++P+ I  +   L  L+   N L    LP+    L  L+   LS N+
Sbjct: 13  HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQL--RELPEQFFQLVKLRKLGLSDNE 70

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           +++ P +I +   L  L +  N +  +P  I+    L V    GN LT +P++F +L  L
Sbjct: 71  IQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNL 130

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
             L ++D  L+SLP +I NL  L SL L  N L  LP  +  L+    +L+ L L NN++
Sbjct: 131 TCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLR----RLEELDLGNNEI 186

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
             LP  I  L  L +L L  N L
Sbjct: 187 YNLPESIGALLHLKDLWLDGNQL 209


>gi|158257928|dbj|BAF84937.1| unnamed protein product [Homo sapiens]
          Length = 524

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 117/209 (55%), Gaps = 7/209 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 211 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+  G+   L  L+L++NQL +LP SI  LK L +L    NKL +LP 
Sbjct: 270 ILKVDQNRLTQLPEAVGECESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPK 329

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           EI    C S  L    + +N+L  +P E+
Sbjct: 330 EIG--GCCS--LTVFCVRDNRLTRIPAEV 354



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/224 (36%), Positives = 115/224 (51%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN +  
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEI-- 94

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+ +S  K L+V + SGN L + P    ++  L  L + + SL  +P  I  L  L
Sbjct: 95  -PEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNL 153

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +PD+   L +LE L L +N++ +LP SI  L  LK L L  N+L  LP
Sbjct: 154 ASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELP 213

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK     L  L +  N+L  LP EI  L  L++L +  N
Sbjct: 214 QEIGNLK----NLLCLDVSENRLERLPEEISGLTSLTDLVISQN 253



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 78/242 (32%), Positives = 122/242 (50%), Gaps = 11/242 (4%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N +   P++ S    L+  D S N +T LP++  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 126 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 185 EIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 244

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L  L++  N L T+P  I  LK    KL  L +  N+L  LP  +   + L+EL L +N 
Sbjct: 245 LTDLVISQNLLETIPDGIGKLK----KLSILKVDQNRLTQLPEAVGECESLTELVLTENQ 300

Query: 280 LV 281
           L+
Sbjct: 301 LL 302



 Score = 75.9 bits (185), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 101/203 (49%), Gaps = 8/203 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ S+D  +  + ++P+ I  +   L  L+   N L    LP+    L  L+   LS N+
Sbjct: 13  HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQL--RELPEQFFQLVKLRKLGLSDNE 70

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           +++ P +I +   L  L +  N +  +P  I+    L V    GN LT +P++F +L  L
Sbjct: 71  IQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNL 130

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
             L ++D  L+SLP +I NL  L SL L  N L  LP  +  L+    +L+ L L NN++
Sbjct: 131 TCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLR----RLEELDLGNNEI 186

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
             LP  I  L  L +L L  N L
Sbjct: 187 YNLPESIGALLHLKDLWLDGNQL 209


>gi|456865424|gb|EMF83758.1| leucine rich repeat protein [Leptospira weilii serovar Topaz str.
           LT2116]
          Length = 230

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 78/186 (41%), Positives = 108/186 (58%), Gaps = 7/186 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           +++ LDLS+N++   P+       L  L  RNN L  + LPK++  LK L+  +L+ NQL
Sbjct: 49  DVQILDLSSNQLITFPKEFGKLKKLQILYLRNNQL--KKLPKEIGELKELQELDLNHNQL 106

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
           E  P +   + +L+ LYL NN L  +P+EI KL  L VL L  N L  +P   G L  L+
Sbjct: 107 ETLPKEFGKLKSLQRLYLDNNQLQALPKEIGKLKNLQVLYLDNNQLQALPKEIGKLKNLQ 166

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L L+DNQL++LP  I  L+ L+ L   NN L TLP EI  LK L E    L+L NN+L 
Sbjct: 167 VLYLNDNQLKTLPKEIEYLQKLRELDSANNPLTTLPKEIGYLKNLEE----LILSNNELT 222

Query: 259 TLPTEI 264
           TLP ++
Sbjct: 223 TLPKKL 228



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 69/165 (41%), Positives = 100/165 (60%), Gaps = 4/165 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +L + + N +++++ +LS NQL  FP +   +  L+ LYL NN L  +P+EI +L +L  
Sbjct: 39  NLTEALQNPEDVQILDLSSNQLITFPKEFGKLKKLQILYLRNNQLKKLPKEIGELKELQE 98

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L  +P  FG L  L+ L L +NQL++LP  I  LK L+ L L NN+L+ LP E
Sbjct: 99  LDLNHNQLETLPKEFGKLKSLQRLYLDNNQLQALPKEIGKLKNLQVLYLDNNQLQALPKE 158

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I  LK     L+ L L++N+L+TLP EI  L+ L EL   +NPL 
Sbjct: 159 IGKLKN----LQVLYLNDNQLKTLPKEIEYLQKLRELDSANNPLT 199



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/175 (41%), Positives = 100/175 (57%), Gaps = 7/175 (4%)

Query: 107 IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPR 166
           ++ N L+T    PK+   LK L++  L  NQL++ P +I ++  L+ L L +N L  +P+
Sbjct: 55  LSSNQLIT---FPKEFGKLKKLQILYLRNNQLKKLPKEIGELKELQELDLNHNQLETLPK 111

Query: 167 EINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLH 226
           E  KL  L  L L  N L  +P   G L  L+ L L +NQL++LP  I  LK L+ L L+
Sbjct: 112 EFGKLKSLQRLYLDNNQLQALPKEIGKLKNLQVLYLDNNQLQALPKEIGKLKNLQVLYLN 171

Query: 227 NNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +N+L+TLP EI  L    +KL+ L   NN L TLP EI  LK L EL L +N L 
Sbjct: 172 DNQLKTLPKEIEYL----QKLRELDSANNPLTTLPKEIGYLKNLEELILSNNELT 222



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 62/160 (38%), Positives = 86/160 (53%), Gaps = 3/160 (1%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           +  L L +N L   P    +   L+ LDL++N++  LP+       L  L   NN L A 
Sbjct: 73  LQILYLRNNQLKKLPKEIGELKELQELDLNHNQLETLPKEFGKLKSLQRLYLDNNQLQA- 131

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            LPK++  LKNL+V  L  NQL+  P +I  +  L+ LYL +N L  +P+EI  L KL  
Sbjct: 132 -LPKEIGKLKNLQVLYLDNNQLQALPKEIGKLKNLQVLYLNDNQLKTLPKEIEYLQKLRE 190

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
           L    N LT +P   G L  LE LILS+N+L +LP  + N
Sbjct: 191 LDSANNPLTTLPKEIGYLKNLEELILSNNELTTLPKKLEN 230



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 4/96 (4%)

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T++ +   +   ++ L LS NQL + P     LK L+ L L NN+L+ LP EI  LK L 
Sbjct: 38  TNLTEALQNPEDVQILDLSSNQLITFPKEFGKLKKLQILYLRNNQLKKLPKEIGELKELQ 97

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           E    L L++N+L TLP E   LK L  L L +N L
Sbjct: 98  E----LDLNHNQLETLPKEFGKLKSLQRLYLDNNQL 129


>gi|428310898|ref|YP_007121875.1| hypothetical protein Mic7113_2682 [Microcoleus sp. PCC 7113]
 gi|428252510|gb|AFZ18469.1| leucine-rich repeat (LRR) protein [Microcoleus sp. PCC 7113]
          Length = 1126

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/226 (41%), Positives = 118/226 (52%), Gaps = 7/226 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           ++  L L  N L+  P       NLR L L NNR+T LP+ I N   L  L    N    
Sbjct: 768 DLTWLYLNRNQLATLPPEIGNLINLRVLSLENNRLTKLPKEIGNLSHLRGLYLSGNY-QL 826

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           + LPK +SNL NL   NLS NQL+  P +I ++  L  L L +N L  +P+EI  L  L 
Sbjct: 827 KVLPKKISNLTNLTQLNLSSNQLKVLPKEIGNLTNLTQLNLSSNQLKVLPKEIGNLTNLT 886

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L L GN LT++P   G+L  LE L LS NQL +LP  I NL  L  L L  N+   LP 
Sbjct: 887 LLDLNGNQLTELPPEIGNLTNLEVLYLSRNQLTALPKEIGNLTNLTELDLSENE-NVLPA 945

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           EI  L      L+ L L+  +L  L  EI  L  L  LSL+DN L+
Sbjct: 946 EIGNLT----NLRRLYLNRKQLTVLVPEIGNLTNLKTLSLKDNQLI 987



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 83/216 (38%), Positives = 110/216 (50%), Gaps = 6/216 (2%)

Query: 66   NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNL 125
            N L+  P      TNL  L LS N++T LP+ I N  L+ L   +       LP ++ NL
Sbjct: 893  NQLTELPPEIGNLTNLEVLYLSRNQLTALPKEIGN--LTNLTELDLSENENVLPAEIGNL 950

Query: 126  KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
             NL+   L+  QL     +I ++  LK L L +N L  +P EI KL +L  L +  N L 
Sbjct: 951  TNLRRLYLNRKQLTVLVPEIGNLTNLKTLSLKDNQLIALPPEIGKLTQLKWLDINKNQLR 1010

Query: 186  DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
             +P   G+L  L  L L DNQL +LP  I NL  L  L L+ NKL  LP E+  L  L E
Sbjct: 1011 QLPPEIGNLTNLTELYLYDNQLTALPKEIGNLTNLTKLHLYKNKLMALPPEMGRLTNLIE 1070

Query: 246  KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                L L  N+L  LP EI  L  L++LS  +N L+
Sbjct: 1071 ----LYLDYNQLTALPPEIGNLTNLTQLSFYNNQLI 1102



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/241 (38%), Positives = 124/241 (51%), Gaps = 10/241 (4%)

Query: 42   QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI-TN 100
            Q+++LP    N    N+  L L  N L   P      TNL  L+LS+N++  LP+ I   
Sbjct: 825  QLKVLPKKISNLT--NLTQLNLSSNQLKVLPKEIGNLTNLTQLNLSSNQLKVLPKEIGNL 882

Query: 101  FPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
              L+ L    N LT   LP ++ NL NL+V  LS NQL   P +I ++  L  L L  N 
Sbjct: 883  TNLTLLDLNGNQLT--ELPPEIGNLTNLEVLYLSRNQLTALPKEIGNLTNLTELDLSENE 940

Query: 161  LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
             N +P EI  L  L  L L    LT +    G+L  L+ L L DNQL +LP  I  L  L
Sbjct: 941  -NVLPAEIGNLTNLRRLYLNRKQLTVLVPEIGNLTNLKTLSLKDNQLIALPPEIGKLTQL 999

Query: 221  KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K L ++ N+LR LP EI  L  L+E    L L++N+L  LP EI  L  L++L L  N L
Sbjct: 1000 KWLDINKNQLRQLPPEIGNLTNLTE----LYLYDNQLTALPKEIGNLTNLTKLHLYKNKL 1055

Query: 281  V 281
            +
Sbjct: 1056 M 1056



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 83/210 (39%), Positives = 114/210 (54%), Gaps = 10/210 (4%)

Query: 72  PDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIA--RNNLLTAESLPKDMSNLKNLK 129
           P    + TN  SL+L+  ++T LP+ I N    T +   RN L T   LP ++ NL NL+
Sbjct: 737 PKEIFQLTNQTSLNLAGKQLTELPKEIGNLTDLTWLYLNRNQLAT---LPPEIGNLINLR 793

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYL-GNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
           V +L  N+L + P +I ++  L+ LYL GN  L  +P++I+ L  L  L+L  N L  +P
Sbjct: 794 VLSLENNRLTKLPKEIGNLSHLRGLYLSGNYQLKVLPKKISNLTNLTQLNLSSNQLKVLP 853

Query: 189 DTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLK 248
              G+L  L  L LS NQL+ LP  I NL  L  L L+ N+L  LP EI  L      L+
Sbjct: 854 KEIGNLTNLTQLNLSSNQLKVLPKEIGNLTNLTLLDLNGNQLTELPPEIGNLT----NLE 909

Query: 249 SLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L L  N+L  LP EI  L  L+EL L +N
Sbjct: 910 VLYLSRNQLTALPKEIGNLTNLTELDLSEN 939



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/170 (39%), Positives = 93/170 (54%), Gaps = 5/170 (2%)

Query: 96  QAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLY 155
           + + N  ++ +  R N   +   PK++  L N    NL+G QL + P +I ++  L +LY
Sbjct: 714 EWLNNLKIAKVPPRPNWTNSYLAPKEIFQLTNQTSLNLAGKQLTELPKEIGNLTDLTWLY 773

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDN-QLESLPASI 214
           L  N L  +P EI  L  L VLSL  N LT +P   G+L  L  L LS N QL+ LP  I
Sbjct: 774 LNRNQLATLPPEIGNLINLRVLSLENNRLTKLPKEIGNLSHLRGLYLSGNYQLKVLPKKI 833

Query: 215 SNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           SNL  L  L L +N+L+ LP EI  L  L++    L L +N+L+ LP EI
Sbjct: 834 SNLTNLTQLNLSSNQLKVLPKEIGNLTNLTQ----LNLSSNQLKVLPKEI 879



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 93/206 (45%), Gaps = 27/206 (13%)

Query: 57   NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-------------- 102
            N++ L L  N L+  P      TNL  LDLS N    LP  I N                
Sbjct: 907  NLEVLYLSRNQLTALPKEIGNLTNLTELDLSENE-NVLPAEIGNLTNLRRLYLNRKQLTV 965

Query: 103  ----------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                      L TL  ++N L A  LP ++  L  LK  +++ NQL Q P +I ++  L 
Sbjct: 966  LVPEIGNLTNLKTLSLKDNQLIA--LPPEIGKLTQLKWLDINKNQLRQLPPEIGNLTNLT 1023

Query: 153  YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
             LYL +N L  +P+EI  L  L  L L  N L  +P   G L  L  L L  NQL +LP 
Sbjct: 1024 ELYLYDNQLTALPKEIGNLTNLTKLHLYKNKLMALPPEMGRLTNLIELYLDYNQLTALPP 1083

Query: 213  SISNLKMLKSLLLHNNKLRTLPTEII 238
             I NL  L  L  +NN+L +   EI+
Sbjct: 1084 EIGNLTNLTQLSFYNNQLISPSPEIV 1109



 Score = 43.5 bits (101), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 44/144 (30%), Positives = 59/144 (40%), Gaps = 22/144 (15%)

Query: 57   NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
            N+ TL L  N L   P    K T L+ LD++ N++  LP  I N   L+ L   +N LTA
Sbjct: 975  NLKTLSLKDNQLIALPPEIGKLTQLKWLDINKNQLRQLPPEIGNLTNLTELYLYDNQLTA 1034

Query: 116  ---------------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYL 154
                                  +LP +M  L NL    L  NQL   P +I ++  L  L
Sbjct: 1035 LPKEIGNLTNLTKLHLYKNKLMALPPEMGRLTNLIELYLDYNQLTALPPEIGNLTNLTQL 1094

Query: 155  YLGNNSLNHVPREINKLCKLHVLS 178
               NN L     EI K     +L+
Sbjct: 1095 SFYNNQLISPSPEIVKQGTQAILA 1118


>gi|455789995|gb|EMF41891.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 595

 Score =  113 bits (283), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 123/249 (49%), Gaps = 24/249 (9%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLL 113
           +N+  L L  N L+  P    +  NL+ LDL +N++   P  I     L +L ++ N L+
Sbjct: 71  KNLQELNLKWNLLTVLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLI 130

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L+NL+   L  N+L  FP +I  +  L+ L+L  N L  +P+EI +L  
Sbjct: 131 I---LPNEIGQLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKN 187

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N  T +P   G L  L+ L L DNQL +LP  I  L+ L+ L L NN+L   
Sbjct: 188 LQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVF 247

Query: 234 PTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           P EI  L+ L                    + L++L L NN+L   P EI  L+ L +L 
Sbjct: 248 PKEIGQLQNLQMLGSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLE 307

Query: 275 LRDNPLVIR 283
           L  NPL ++
Sbjct: 308 LLMNPLSLK 316



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/213 (38%), Positives = 117/213 (54%), Gaps = 5/213 (2%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKV 130
           FP    KF NLR L+L +   + LP+ I+       +A   L   +++P ++  LKNL+ 
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALG-LNGLKNIPSEIGQLKNLEA 426

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NL  N+LE+ P +I  +  L+ L L  N+L   P EI +L KL  L L  N  T  P  
Sbjct: 427 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
            G L  L+ L L  NQL +L A I  L+ L+ L L++N+   LP EI  LK    KL++L
Sbjct: 487 IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLK----KLQTL 542

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
            L NN+L TLPTEI  L+ L  L L++N L ++
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLK 575



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 112/221 (50%), Gaps = 11/221 (4%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N+  L LY    S  P   S+  NL+ L L  N + ++P  I     L  L    N 
Sbjct: 374 KFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE 433

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L  E LPK++  L+NL+  +L  N L+ FP +I  +  L+ L L  N     P+EI KL 
Sbjct: 434 L--ERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLE 491

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L+L  N LT++    G L  L+ L L+DNQ   LP  I  LK L++L L NN+L T
Sbjct: 492 NLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTT 551

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTE----IITLKC 269
           LPTEI  L    + L+ L L NN+L     E    ++ LKC
Sbjct: 552 LPTEIGQL----QNLQWLYLQNNQLSLKEQERIRKLLPLKC 588



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 116/261 (44%), Gaps = 44/261 (16%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNN--------RITHLPQAITNFPLSTL- 106
           +N+ TL L +N L+ FP    +  NL+ L+L  N        RI  L      FP S L 
Sbjct: 278 QNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKL------FPDSNLD 331

Query: 107 ---IARNNLLT----------------------AESLPKDMSNLKNLKVFNLSGNQLEQF 141
              +A N +                        ++S PK +   +NL+  NL        
Sbjct: 332 LREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTL 391

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P +I  +  LKYL LG N L ++P EI +L  L  L+L  N L  +P   G L  L+ L 
Sbjct: 392 PKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLS 451

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           L  N L+  PA I  LK L+ L L  N+  T P EI  L    E L++L L  N+L  L 
Sbjct: 452 LHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKL----ENLQTLNLQRNQLTNLT 507

Query: 262 TEIITLKCLSELSLRDNPLVI 282
            EI  L+ L EL L DN   +
Sbjct: 508 AEIGQLQNLQELDLNDNQFTV 528



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/165 (40%), Positives = 89/165 (53%), Gaps = 4/165 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  N++V NLSG +L   P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 36  TYRDLTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIGQLEN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L   P    +L +LE+L LS+N+L  LP  I  L+ L+ L L+ NKL T 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGQLQNLQDLGLYKNKLTTF 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P EI  L    + L+ L L  N+L  LP EI  LK L  L L+DN
Sbjct: 156 PKEIGQL----QNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDN 196



 Score = 48.5 bits (114), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/111 (33%), Positives = 54/111 (48%), Gaps = 4/111 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+     +   +  L LS  +L +LP  I  LK L+ L L  N L 
Sbjct: 25  CEIQADEVEAGTYRDLTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLT 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            LP EI  L    E L+ L L +N+L T P  I+ L+ L  L L +N L+I
Sbjct: 85  VLPKEIGQL----ENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLII 131


>gi|24216022|ref|NP_713503.1| hypothetical protein LA_3323 [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386075103|ref|YP_005989422.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24197250|gb|AAN50521.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458894|gb|AER03439.1| leucine-rich repeat protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 311

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 96/260 (36%), Positives = 140/260 (53%), Gaps = 18/260 (6%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           + ++TLD S +    +TL  +I          K +N+  L L  N L+  P    +  NL
Sbjct: 49  LKVRTLDLSANRF--KTLPKEI---------GKLKNLQELNLNKNQLTTLPQEIGQLKNL 97

Query: 82  RSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           +SL+LS N+I  +P+ I     L +L   NN LT  +LP+++  L+NL+  +LS N+L  
Sbjct: 98  KSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLT--TLPQEIGQLQNLQSLDLSTNRLTT 155

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +I  +  L+ LYL +N L  +P EI +L  L  L+L  N LT +      L  L++L
Sbjct: 156 LPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTTLSKEIEQLQNLKSL 215

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L  NQL + P  I  LK L+ L L +N+L TLP  I  LK     L++L L +N+L TL
Sbjct: 216 DLRSNQLTTFPKEIEQLKNLQVLDLGSNQLTTLPEGIGQLK----NLQTLDLDSNQLTTL 271

Query: 261 PTEIITLKCLSELSLRDNPL 280
           P EI  L+ L EL L +N L
Sbjct: 272 PQEIGQLQNLQELFLNNNQL 291



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 88/229 (38%), Positives = 111/229 (48%), Gaps = 28/229 (12%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNL 112
           + P  + TL L  N     P    K  NL+ L+L+ N++T LPQ I              
Sbjct: 46  QNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTTLPQEI-------------- 91

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
                       LKNLK  NLS NQ++  P +I  +  L+ L L NN L  +P+EI +L 
Sbjct: 92  ----------GQLKNLKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQ 141

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N LT +P   G L  L+ L L  NQL  LP  I  LK L++L L NN+L T
Sbjct: 142 NLQSLDLSTNRLTTLPQEIGHLQNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLTT 201

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L  EI  L    + LKSL L +N+L T P EI  LK L  L L  N L 
Sbjct: 202 LSKEIEQL----QNLKSLDLRSNQLTTFPKEIEQLKNLQVLDLGSNQLT 246



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 92/168 (54%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N   ++  +LS N+ +  P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 37  TYTDLTKALQNPLKVRTLDLSANRFKTLPKEIGKLKNLQELNLNKNQLTTLPQEIGQLKN 96

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N +  IP     L +L++L L +NQL +LP  I  L+ L+SL L  N+L TL
Sbjct: 97  LKSLNLSYNQIKTIPKEIEKLQKLQSLGLDNNQLTTLPQEIGQLQNLQSLDLSTNRLTTL 156

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L    + L+ L L +N+L  LP EI  LK L  L+LR+N L 
Sbjct: 157 PQEIGHL----QNLQDLYLVSNQLTILPNEIGQLKNLQTLNLRNNRLT 200


>gi|418667007|ref|ZP_13228423.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Pyrogenes str. 2006006960]
 gi|410757251|gb|EKR18865.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Pyrogenes str. 2006006960]
          Length = 564

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 91/255 (35%), Positives = 127/255 (49%), Gaps = 33/255 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-----------LS 104
           +N+ TL L  N L+ FP    +  NL+ LDL+ N++  LP+ I               ++
Sbjct: 35  QNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQIT 94

Query: 105 TLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHV 164
           TL   N L T   LP ++  LKNL++ +LS N+L   P +I  +  LK L LG N L  +
Sbjct: 95  TLPKGNQLTT---LPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTL 151

Query: 165 PREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLL 224
           PREINKL  L  L L GN LT +P    +L  L  L L +N++ +LP  I   K L+ L 
Sbjct: 152 PREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELN 211

Query: 225 LHNNKLRTLPTEI-------------ITLKCLSEKLKSLL------LHNNKLRTLPTEII 265
           L  N+L TLP EI               +K L  ++ +L       L  NKL ++P EI 
Sbjct: 212 LRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIG 271

Query: 266 TLKCLSELSLRDNPL 280
            L+ L  L L +N L
Sbjct: 272 NLQNLRMLYLENNQL 286



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 82/219 (37%), Positives = 113/219 (51%), Gaps = 16/219 (7%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  P    +  NL++L LS N++T  P+ I     L  L    N L 
Sbjct: 12  QNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQELDLNGNQL- 70

Query: 115 AESLPKDMSNLKNLKVFNL---------SGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
            ++LPK++  L+ L+  NL          GNQL   P +I  +  L+ L L  N L  +P
Sbjct: 71  -KTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLP 129

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
           REI +L  L  L LGGN LT +P     L  L+ L L+ N+L  +P  I  L+ L  L L
Sbjct: 130 REIGQLQNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRL 189

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
            NN++ TLP EI      S+ L+ L L  N+L TLP EI
Sbjct: 190 KNNRISTLPKEIEK----SKNLQELNLRGNRLVTLPGEI 224



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 76/174 (43%), Positives = 93/174 (53%), Gaps = 13/174 (7%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LPK++  L+NL+  NL  NQL   P++I  +  L+ L L  N L   P+EI +L  L  L
Sbjct: 4   LPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQTLGLSENQLTTFPKEIGQLENLQEL 63

Query: 178 SLGGNSLTDIPDTFGDLYQLEALIL---------SDNQLESLPASISNLKMLKSLLLHNN 228
            L GN L  +P   G L +LE L L           NQL +LPA I  LK L+ L L  N
Sbjct: 64  DLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTLPKGNQLTTLPAEIGQLKNLQILSLSYN 123

Query: 229 KLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           +L TLP EI  L    + LKSL L  N+L TLP EI  LK L EL L  N L I
Sbjct: 124 RLATLPREIGQL----QNLKSLDLGGNQLTTLPREINKLKNLKELYLNGNKLTI 173



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/242 (35%), Positives = 114/242 (47%), Gaps = 52/242 (21%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKN 127
           L+  P    +  NL++L+L +N++                         +LP ++  L+N
Sbjct: 1   LTVLPKEIGQLQNLQTLNLQDNQLA------------------------TLPVEIGQLQN 36

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL-------- 179
           L+   LS NQL  FP +I  +  L+ L L  N L  +P+EI +L KL  L+L        
Sbjct: 37  LQTLGLSENQLTTFPKEIGQLENLQELDLNGNQLKTLPKEIGQLQKLEKLNLDGNQITTL 96

Query: 180 -GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
             GN LT +P   G L  L+ L LS N+L +LP  I  L+ LKSL L  N+L TLP EI 
Sbjct: 97  PKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLTTLPREIN 156

Query: 239 TLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
            LK L                    E L  L L NN++ TLP EI   K L EL+LR N 
Sbjct: 157 KLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELNLRGNR 216

Query: 280 LV 281
           LV
Sbjct: 217 LV 218



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/223 (38%), Positives = 124/223 (55%), Gaps = 7/223 (3%)

Query: 60  TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESL 118
           T L   N L+  P    +  NL+ L LS NR+  LP+ I     L +L    N LT  +L
Sbjct: 94  TTLPKGNQLTTLPAEIGQLKNLQILSLSYNRLATLPREIGQLQNLKSLDLGGNQLT--TL 151

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P++++ LKNLK   L+GN+L   P +I ++  L  L L NN ++ +P+EI K   L  L+
Sbjct: 152 PREINKLKNLKELYLNGNKLTIVPKEIWELENLTILRLKNNRISTLPKEIEKSKNLQELN 211

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           L GN L  +P   G+L  LE L L +N+++ LP  I  L+ L    L  NKL ++P EI 
Sbjct: 212 LRGNRLVTLPGEIGELKLLEELNLENNRIKILPNEIGALENLWIFNLSGNKLASIPKEIG 271

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L    + L+ L L NN+L+TLP ++  L+ L  L+L  NPL+
Sbjct: 272 NL----QNLRMLYLENNQLKTLPRQMEKLQDLEVLNLLINPLL 310



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 80/229 (34%), Positives = 120/229 (52%), Gaps = 29/229 (12%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNL 112
           ++P  I +L L +   S FP    K  NLRSL L +               ++L+A    
Sbjct: 345 EQPLKILSLSLEYQEFSLFPKEILKLKNLRSLSLYD---------------TSLVA---- 385

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG-NNSLNHVPREINKL 171
                LPK++  LK+L+  +L  NQL+  P +I  +  L+ L +G NN    +P+EI +L
Sbjct: 386 -----LPKEIVRLKHLERLSLGLNQLKSLPKEIGLLRNLRSLDIGANNEFEVLPKEIARL 440

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L L  N     P    +L +L  L ++ NQL++LP  I  LK L+ L L +N+L 
Sbjct: 441 QNLRSLLLNQNRFKIFPKEIWELKKLVILNVNTNQLDALPEKIGRLKGLQMLDLSHNRLT 500

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           TLP+EI  L  L+E    L L  N+++TLP EI  L+ L +L+L +NP+
Sbjct: 501 TLPSEIGQLHNLTE----LYLQYNRIKTLPEEIARLQNLRKLTLYENPI 545


>gi|291242572|ref|XP_002741180.1| PREDICTED: Lap1-like, partial [Saccoglossus kowalevskii]
          Length = 308

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/214 (34%), Positives = 117/214 (54%), Gaps = 7/214 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L+  P    +   L+ L+LS+N+I  +P+++     L+ L  R N LTA  +P ++S 
Sbjct: 1   NGLTIVPQEIGECHELQKLNLSSNKIEKIPESLYALEQLTELNVRYNALTA--IPDEISK 58

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           LKN+K+ NLS N++ + P  +  +  L  LY+  N+L  +P EI KL  L++L L  N +
Sbjct: 59  LKNMKILNLSSNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSLNILKLNNNKI 118

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
             IPD+   L QL  L +  + L ++P +I  LK +K L L  N++  +P  +    C  
Sbjct: 119 AKIPDSLCALEQLTELYMGSDALTAIPDAIGKLKSMKILKLDENEIEKIPDSL----CAL 174

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           E+L  L +  N L  +P EI  LK +  L+LR N
Sbjct: 175 EQLTELNMKYNALTAIPDEIGKLKSMKILNLRSN 208



 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 128/240 (53%), Gaps = 9/240 (3%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           + +IE +P + Y    E +  L + +N L+  PD  SK  N++ L+LS+N+I  +P ++ 
Sbjct: 23  SNKIEKIPESLY--ALEQLTELNVRYNALTAIPDEISKLKNMKILNLSSNKIAKIPDSLC 80

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L+ L    N LTA  +P ++  LK+L +  L+ N++ + P  +  +  L  LY+G+
Sbjct: 81  ALEQLTELYMEYNALTA--IPDEIGKLKSLNILKLNNNKIAKIPDSLCALEQLTELYMGS 138

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           ++L  +P  I KL  + +L L  N +  IPD+   L QL  L +  N L ++P  I  LK
Sbjct: 139 DALTAIPDAIGKLKSMKILKLDENEIEKIPDSLCALEQLTELNMKYNALTAIPDEIGKLK 198

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            +K L L +NK   +P  +    C  E+L  L + +N L ++P EI  LK +  L+L  N
Sbjct: 199 SMKILNLRSNKFAKIPDSL----CALEQLTELNMKSNALTSIPDEISKLKSMKTLNLSAN 254



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/224 (32%), Positives = 116/224 (51%), Gaps = 7/224 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E +  L + +N L+  PD   K  +L  L L+NN+I  +P ++     L+ L   ++ LT
Sbjct: 83  EQLTELYMEYNALTAIPDEIGKLKSLNILKLNNNKIAKIPDSLCALEQLTELYMGSDALT 142

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  +P  +  LK++K+  L  N++E+ P  +  +  L  L +  N+L  +P EI KL  +
Sbjct: 143 A--IPDAIGKLKSMKILKLDENEIEKIPDSLCALEQLTELNMKYNALTAIPDEIGKLKSM 200

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L+L  N    IPD+   L QL  L +  N L S+P  IS LK +K+L L  N +  +P
Sbjct: 201 KILNLRSNKFAKIPDSLCALEQLTELNMKSNALTSIPDEISKLKSMKTLNLSANTIEKIP 260

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             +    C  E+L  L +  N L  +P EI  LK +  L+L+ N
Sbjct: 261 DSL----CALEQLTELNMKYNALTAIPDEIGKLKSMKILNLKSN 300



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 94/180 (52%), Gaps = 3/180 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E +  L +  + L+  PD   K  +++ L L  N I  +P ++     L+ L  + N LT
Sbjct: 129 EQLTELYMGSDALTAIPDAIGKLKSMKILKLDENEIEKIPDSLCALEQLTELNMKYNALT 188

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  +P ++  LK++K+ NL  N+  + P  +  +  L  L + +N+L  +P EI+KL  +
Sbjct: 189 A--IPDEIGKLKSMKILNLRSNKFAKIPDSLCALEQLTELNMKSNALTSIPDEISKLKSM 246

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N++  IPD+   L QL  L +  N L ++P  I  LK +K L L +NK   +P
Sbjct: 247 KTLNLSANTIEKIPDSLCALEQLTELNMKYNALTAIPDEIGKLKSMKILNLKSNKFAKIP 306



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/136 (31%), Positives = 75/136 (55%), Gaps = 3/136 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E +  L + +N L+  PD   K  +++ L+L +N+   +P ++     L+ L  ++N LT
Sbjct: 175 EQLTELNMKYNALTAIPDEIGKLKSMKILNLRSNKFAKIPDSLCALEQLTELNMKSNALT 234

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             S+P ++S LK++K  NLS N +E+ P  +  +  L  L +  N+L  +P EI KL  +
Sbjct: 235 --SIPDEISKLKSMKTLNLSANTIEKIPDSLCALEQLTELNMKYNALTAIPDEIGKLKSM 292

Query: 175 HVLSLGGNSLTDIPDT 190
            +L+L  N    IPD+
Sbjct: 293 KILNLKSNKFAKIPDS 308


>gi|124007588|ref|ZP_01692292.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123986886|gb|EAY26651.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 318

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/225 (40%), Positives = 118/225 (52%), Gaps = 11/225 (4%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N+  L L +N LS  P +     +L  LDLS N+ T LP+ I     L  L+  ++ +T
Sbjct: 32  KNLQMLDLSYNTLSSLPKSLGNLKSLEKLDLSGNKFTELPEVIGQLTSLQRLVLTHSQIT 91

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             S PK + NLK L   NLS  Q  Q P  I  I +L+ L +   SL  +P+ I KL  L
Sbjct: 92  --SFPKSIQNLKKLWSLNLSAIQTTQLPTNIELITSLEKLQVEAGSLTKLPKNIGKLTNL 149

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN----NKL 230
             L L  N L  +P++ GDL  L+ LIL  N+L+SLPA+I  LK L+ L L +    N+L
Sbjct: 150 IELKLNHNQLISLPESLGDLKNLKKLILYSNKLKSLPATIGQLKNLELLSLGDFRGTNEL 209

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
             LP  I  LK L E    L L  N+L  LP  I  LK L EL L
Sbjct: 210 TVLPESIGQLKSLRE----LHLTGNRLTKLPKSIGQLKSLRELHL 250



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/204 (34%), Positives = 107/204 (52%), Gaps = 16/204 (7%)

Query: 25  KTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSL 84
           K    + S++ +  L T IEL+          +++ L +   +L+  P N  K TNL  L
Sbjct: 102 KLWSLNLSAIQTTQLPTNIELI---------TSLEKLQVEAGSLTKLPKNIGKLTNLIEL 152

Query: 85  DLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLS----GNQLE 139
            L++N++  LP+++ +   L  LI  +N L  +SLP  +  LKNL++ +L      N+L 
Sbjct: 153 KLNHNQLISLPESLGDLKNLKKLILYSNKL--KSLPATIGQLKNLELLSLGDFRGTNELT 210

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
             P  I  + +L+ L+L  N L  +P+ I +L  L  L L G  LTD+PD+ G L  LE 
Sbjct: 211 VLPESIGQLKSLRELHLTGNRLTKLPKSIGQLKSLRELHLMGCGLTDLPDSIGQLENLEV 270

Query: 200 LILSDNQLESLPASISNLKMLKSL 223
           L LS N+L  LP SI  L  LK +
Sbjct: 271 LYLSGNKLAKLPKSIGKLNRLKKI 294



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 83/255 (32%), Positives = 116/255 (45%), Gaps = 44/255 (17%)

Query: 24  IKTLDFSYSSLDS--ETLATQIEL----LPNNDYNKKPENIDTL------LLYHNNLSFF 71
           ++ LD SY++L S  ++L     L    L  N + + PE I  L      +L H+ ++ F
Sbjct: 34  LQMLDLSYNTLSSLPKSLGNLKSLEKLDLSGNKFTELPEVIGQLTSLQRLVLTHSQITSF 93

Query: 72  PDNASKFTNLRSLDLSNNRITHLP----------------QAITNFP-----LSTLIA-- 108
           P +      L SL+LS  + T LP                 ++T  P     L+ LI   
Sbjct: 94  PKSIQNLKKLWSLNLSAIQTTQLPTNIELITSLEKLQVEAGSLTKLPKNIGKLTNLIELK 153

Query: 109 --RNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN----NSLN 162
              N L+   SLP+ + +LKNLK   L  N+L+  P  I  +  L+ L LG+    N L 
Sbjct: 154 LNHNQLI---SLPESLGDLKNLKKLILYSNKLKSLPATIGQLKNLELLSLGDFRGTNELT 210

Query: 163 HVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKS 222
            +P  I +L  L  L L GN LT +P + G L  L  L L    L  LP SI  L+ L+ 
Sbjct: 211 VLPESIGQLKSLRELHLTGNRLTKLPKSIGQLKSLRELHLMGCGLTDLPDSIGQLENLEV 270

Query: 223 LLLHNNKLRTLPTEI 237
           L L  NKL  LP  I
Sbjct: 271 LYLSGNKLAKLPKSI 285



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 92/199 (46%), Gaps = 46/199 (23%)

Query: 144 QILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILS 203
           +I  +  L+ L L  N+L+ +P+ +  L  L  L L GN  T++P+  G L  L+ L+L+
Sbjct: 27  KIGRLKNLQMLDLSYNTLSSLPKSLGNLKSLEKLDLSGNKFTELPEVIGQLTSLQRLVLT 86

Query: 204 DNQLESLPASISNLKMLKSLLLHNNKLRTLPT--EIIT---------------------- 239
            +Q+ S P SI NLK L SL L   +   LPT  E+IT                      
Sbjct: 87  HSQITSFPKSIQNLKKLWSLNLSAIQTTQLPTNIELITSLEKLQVEAGSLTKLPKNIGKL 146

Query: 240 ------------LKCLSEK------LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                       L  L E       LK L+L++NKL++LP  I  LK L  LSL D    
Sbjct: 147 TNLIELKLNHNQLISLPESLGDLKNLKKLILYSNKLKSLPATIGQLKNLELLSLGD---- 202

Query: 282 IRFVSDMTYKPPSLLELAS 300
            R  +++T  P S+ +L S
Sbjct: 203 FRGTNELTVLPESIGQLKS 221



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 43/128 (33%), Positives = 65/128 (50%), Gaps = 4/128 (3%)

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           LYL   +L  +  +I +L  L +L L  N+L+ +P + G+L  LE L LS N+   LP  
Sbjct: 14  LYLNKENLTALSEKIGRLKNLQMLDLSYNTLSSLPKSLGNLKSLEKLDLSGNKFTELPEV 73

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           I  L  L+ L+L ++++ + P  I  LK    KL SL L   +   LPT I  +  L +L
Sbjct: 74  IGQLTSLQRLVLTHSQITSFPKSIQNLK----KLWSLNLSAIQTTQLPTNIELITSLEKL 129

Query: 274 SLRDNPLV 281
            +    L 
Sbjct: 130 QVEAGSLT 137



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 3/91 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L+  P++  +  +LR L L+ NR+T LP++I     L  L      LT   LP  +  
Sbjct: 207 NELTVLPESIGQLKSLRELHLTGNRLTKLPKSIGQLKSLRELHLMGCGLT--DLPDSIGQ 264

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLY 155
           L+NL+V  LSGN+L + P  I  +  LK +Y
Sbjct: 265 LENLEVLYLSGNKLAKLPKSIGKLNRLKKIY 295


>gi|301775170|ref|XP_002923003.1| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 1-like [Ailuropoda melanoleuca]
          Length = 521

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 117/209 (55%), Gaps = 7/209 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 149 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS- 207

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 208 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMIPDGIGKLKKLS 266

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+  GD   L  L+L++N+L +LP SI  LK L +L    NKL +LP 
Sbjct: 267 ILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSIGKLKKLNNLNADRNKLVSLPK 326

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           EI    C S  L    + +N+L  +P E+
Sbjct: 327 EIG--GCCS--LTVFCVRDNRLSRIPAEV 351



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 116/224 (51%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN++  
Sbjct: 34  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDI-- 91

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+ +S  K L++ + SGN L + P    ++  L  L + + SL  +P  I  L  L
Sbjct: 92  -PEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNL 150

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +PD+   L +LE L L +N++ +LP SI  L  LK L L  N+L  LP
Sbjct: 151 ASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELP 210

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK     L  L +  N+L  LP EI  L  L++L +  N
Sbjct: 211 QEIGNLK----NLLCLDVSENRLERLPEEISGLTSLTDLVISQN 250



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 122/242 (50%), Gaps = 11/242 (4%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N++   P++ S    L+  D S N +T LP++  
Sbjct: 63  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 122

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 123 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 181

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 182 EIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 241

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L  L++  N L  +P  I  LK    KL  L +  N+L  LP  +   + L+EL L +N 
Sbjct: 242 LTDLVISQNLLEMIPDGIGKLK----KLSILKVDQNRLTQLPEAVGDCESLTELVLTENR 297

Query: 280 LV 281
           L+
Sbjct: 298 LL 299



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 107/224 (47%), Gaps = 14/224 (6%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN+    PE+I  LL      L  N LS  P       NL  LD+S NR+  LP+ I+
Sbjct: 178 LGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS 237

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L+ L+   NLL  E +P  +  LK L +  +  N+L Q P  + D  +L  L L  
Sbjct: 238 GLTSLTDLVISQNLL--EMIPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTE 295

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P+ I KL KL+ L+   N L  +P   G    L    + DN+L  +PA +S   
Sbjct: 296 NRLLTLPKSIGKLKKLNNLNADRNKLVSLPKEIGGCCSLTVFCVRDNRLSRIPAEVSQAT 355

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
            L  L +  N+L  LP  +  L     KLK+L L +N+ + L T
Sbjct: 356 ELHVLDVAGNRLLHLPLSLTAL-----KLKALWLSDNQSQPLLT 394



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 8/205 (3%)

Query: 78  FTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSG 135
           +  L ++D  +  + ++P+ I  +   L  L+   N L    LP+    L  L+   LS 
Sbjct: 8   WRXLETIDKRHCSLVYVPEEIYRYARSLEELLLDANQL--RELPEQFFQLVKLRKLGLSD 65

Query: 136 NQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLY 195
           N++++ P +I +   L  L +  N +  +P  I+    L +    GN LT +P++F +L 
Sbjct: 66  NEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQ 125

Query: 196 QLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNN 255
            L  L ++D  L+SLP +I NL  L SL L  N L  LP  +  L+    +L+ L L NN
Sbjct: 126 NLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLR----RLEELDLGNN 181

Query: 256 KLRTLPTEIITLKCLSELSLRDNPL 280
           ++  LP  I  L  L +L L  N L
Sbjct: 182 EIYNLPESIGALLHLKDLWLDGNQL 206


>gi|418720608|ref|ZP_13279804.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410742882|gb|EKQ91627.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
          Length = 265

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 81/204 (39%), Positives = 116/204 (56%), Gaps = 7/204 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           ++R+L L+ N +  LP+ I     L  L  R N    ++LPK++ NL+NL + +L  N+ 
Sbjct: 54  DVRALYLNGNELKTLPKEIGELQNLDGLKLRYN--KFKTLPKEIGNLQNLGLLDLEKNKF 111

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
           +  P +I ++  L+ L L +N L  +P+EI +L  L  L+L  N L  +P   G+L  L 
Sbjct: 112 KTLPKEIWNLQKLQVLDLSHNKLKTLPKEIGELQNLRYLNLSDNQLMTLPKEIGELQNLR 171

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L LS NQL +LP  I NL+ L+ L L+ N+L TLP EI  L+ L E    L L  N+L 
Sbjct: 172 YLDLSGNQLMTLPKEIWNLQNLQELYLNGNQLMTLPKEIGELQNLQE----LHLSGNQLM 227

Query: 259 TLPTEIITLKCLSELSLRDNPLVI 282
           TLP EI  L+ L EL L  N L+I
Sbjct: 228 TLPKEIWNLQNLRELHLSGNQLMI 251



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/217 (37%), Positives = 114/217 (52%), Gaps = 8/217 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L L  N L   P    +  NL  L L  N+   LP+ I N   L  L    N  
Sbjct: 52  PIDVRALYLNGNELKTLPKEIGELQNLDGLKLRYNKFKTLPKEIGNLQNLGLLDLEKN-- 109

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
             ++LPK++ NL+ L+V +LS N+L+  P +I ++  L+YL L +N L  +P+EI +L  
Sbjct: 110 KFKTLPKEIWNLQKLQVLDLSHNKLKTLPKEIGELQNLRYLNLSDNQLMTLPKEIGELQN 169

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L GN L  +P    +L  L+ L L+ NQL +LP  I  L+ L+ L L  N+L TL
Sbjct: 170 LRYLDLSGNQLMTLPKEIWNLQNLQELYLNGNQLMTLPKEIGELQNLQELHLSGNQLMTL 229

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
           P EI  L+ L E    L L  N+L  +P EI   K L
Sbjct: 230 PKEIWNLQNLRE----LHLSGNQL-MIPKEIWNSKKL 261



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/165 (36%), Positives = 91/165 (55%), Gaps = 4/165 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +L + + N  +++   L+GN+L+  P +I ++  L  L L  N    +P+EI  L  L +
Sbjct: 44  NLAEALQNPIDVRALYLNGNELKTLPKEIGELQNLDGLKLRYNKFKTLPKEIGNLQNLGL 103

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N    +P    +L +L+ L LS N+L++LP  I  L+ L+ L L +N+L TLP E
Sbjct: 104 LDLEKNKFKTLPKEIWNLQKLQVLDLSHNKLKTLPKEIGELQNLRYLNLSDNQLMTLPKE 163

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I  L    + L+ L L  N+L TLP EI  L+ L EL L  N L+
Sbjct: 164 IGEL----QNLRYLDLSGNQLMTLPKEIWNLQNLQELYLNGNQLM 204


>gi|338718176|ref|XP_001918318.2| PREDICTED: LOW QUALITY PROTEIN: leucine-rich repeat-containing
           protein 1 [Equus caballus]
          Length = 524

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 129/242 (53%), Gaps = 23/242 (9%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I   F L  L    N L+ 
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALFHLKDLWLDGNQLS- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 211 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N L  +P+  GD   L  L+L++N+L +LP SI  LK L +L    NKL +LP 
Sbjct: 270 ILKVDQNRLAQLPEAVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPK 329

Query: 236 EI-----ITLKCLSE--------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           EI     +T+ C+ +              +L  L +  N+L  LP  + TLK L  L L 
Sbjct: 330 EIGGCCGLTVFCVRDNRLTRIPAEVSQATELHVLDVAGNRLLHLPLSLTTLK-LKALWLS 388

Query: 277 DN 278
           DN
Sbjct: 389 DN 390



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 126/261 (48%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N++   P++ S    L+  D S N +T LP++  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 126 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 185 EIYNLPESIGALFHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 244

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTL 260
           L  L++  N L T+P  I  LK LS                   E L  L+L  N+L TL
Sbjct: 245 LTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLAQLPEAVGDCESLTELVLTENRLLTL 304

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK LS L+   N LV
Sbjct: 305 PKSIGKLKKLSNLNADRNKLV 325



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 116/224 (51%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN++  
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDI-- 94

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+ +S  K L++ + SGN L + P    ++  L  L + + SL  +P  I  L  L
Sbjct: 95  -PEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNL 153

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +PD+   L +LE L L +N++ +LP SI  L  LK L L  N+L  LP
Sbjct: 154 ASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALFHLKDLWLDGNQLSELP 213

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK     L  L +  N+L  LP EI  L  L++L +  N
Sbjct: 214 QEIGNLK----NLLCLDVSENRLERLPEEISGLTSLTDLVISQN 253



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 98/220 (44%), Gaps = 33/220 (15%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN+    PE+I  L       L  N LS  P       NL  LD+S NR+  LP+ I+
Sbjct: 181 LGNNEIYNLPESIGALFHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS 240

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL-- 156
               L+ L+   NLL  E++P  +  LK L +  +  N+L Q P  + D  +L  L L  
Sbjct: 241 GLTSLTDLVISQNLL--ETIPDGIGKLKKLSILKVDQNRLAQLPEAVGDCESLTELVLTE 298

Query: 157 ---------------------GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLY 195
                                  N L  +P+EI   C L V  +  N LT IP       
Sbjct: 299 NRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCGLTVFCVRDNRLTRIPAEVSQAT 358

Query: 196 QLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L  L ++ N+L  LP S++ LK LK+L L +N+ + L T
Sbjct: 359 ELHVLDVAGNRLLHLPLSLTTLK-LKALWLSDNQSQPLLT 397



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 63/202 (31%), Positives = 100/202 (49%), Gaps = 8/202 (3%)

Query: 81  LRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           + S+D  +  + ++P+ I  +   L  L+   N L    LP+    L  L+   LS N++
Sbjct: 14  VESIDKRHCSLVYVPEEIYRYARSLEELLLDANQL--RELPEQFFQLVKLRKLGLSDNEI 71

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
           ++ P +I +   L  L +  N +  +P  I+    L +    GN LT +P++F +L  L 
Sbjct: 72  QRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNLT 131

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L ++D  L+SLP +I NL  L SL L  N L  LP  +  L+    +L+ L L NN++ 
Sbjct: 132 CLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLR----RLEELDLGNNEIY 187

Query: 259 TLPTEIITLKCLSELSLRDNPL 280
            LP  I  L  L +L L  N L
Sbjct: 188 NLPESIGALFHLKDLWLDGNQL 209


>gi|427707259|ref|YP_007049636.1| adenylate cyclase [Nostoc sp. PCC 7107]
 gi|427359764|gb|AFY42486.1| Adenylate cyclase [Nostoc sp. PCC 7107]
          Length = 238

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/219 (39%), Positives = 117/219 (53%), Gaps = 7/219 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L ++ LS  P    + +NL+ L L NN+++ LP  I     L+ L   +N L+  SLP +
Sbjct: 23  LSNHQLSSLPPEICQLSNLKVLYLDNNQLSSLPPEICQLSNLTDLFLSDNQLS--SLPPE 80

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L NL    L+GNQL   P++I  I  L  LY  NN L+ +P EI +L  L  L L  
Sbjct: 81  ICQLSNLTELYLNGNQLSSLPLEICQISNLMGLYFHNNQLSSLPPEICQLSNLTALYLSN 140

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L+ +P     L  L  L L+ NQL SLP  +  L  LK L L NN+L  LP+EI  L 
Sbjct: 141 NQLSSLPSEICQLSNLTELYLNGNQLSSLPPELCQLSNLKLLDLSNNQLSHLPSEIRQLS 200

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            L+E    L L+ N+L TLP E+  L  L+EL    NPL
Sbjct: 201 NLTE----LYLNGNQLSTLPPELCQLSNLTELDFSHNPL 235



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 58/154 (37%), Positives = 77/154 (50%), Gaps = 3/154 (1%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L  N LS  P    + +NL  L   NN+++ LP  I     L+ L   NN L+ 
Sbjct: 86  NLTELYLNGNQLSSLPLEICQISNLMGLYFHNNQLSSLPPEICQLSNLTALYLSNNQLS- 144

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLP ++  L NL    L+GNQL   P ++  +  LK L L NN L+H+P EI +L  L 
Sbjct: 145 -SLPSEICQLSNLTELYLNGNQLSSLPPELCQLSNLKLLDLSNNQLSHLPSEIRQLSNLT 203

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            L L GN L+ +P     L  L  L  S N L S
Sbjct: 204 ELYLNGNQLSTLPPELCQLSNLTELDFSHNPLSS 237


>gi|350417075|ref|XP_003491244.1| PREDICTED: protein lap4-like isoform 2 [Bombus impatiens]
          Length = 1759

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 121/224 (54%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLT 114
           +++ LLL  N++   P N  +   LR L LS+N I  LP  I NF   +   ++RN++  
Sbjct: 38  SLEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDI-- 95

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+++ NL+ L+V + S N + + P   + +  L  L L + SL ++P +   L  L
Sbjct: 96  -PDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEAL 154

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P++   LY+LE L L DN +E LPA I  L  L+ L L +N+L+ LP
Sbjct: 155 QSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQHLP 214

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK L+     L +  N+L  LP EI  L+ L++L L  N
Sbjct: 215 PEIGELKTLA----CLDVSENRLEDLPEEIGGLESLTDLHLSQN 254



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 124/268 (46%), Gaps = 45/268 (16%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQA----------------IT 99
           EN+  L +  N++   P+N      L+  D S+N I  LP                  +T
Sbjct: 83  ENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLT 142

Query: 100 NFP--------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
           N P        L +L  R NLL  +SLP+ +S L  L+  +L  N +E  P  I  +P L
Sbjct: 143 NLPPDFGSLEALQSLELRENLL--KSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPAL 200

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           + L+L +N L H+P EI +L  L  L +  N L D+P+  G L  L  L LS N +E LP
Sbjct: 201 QELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLP 260

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE-------------------KLKSLLL 252
             +  L+ L  L +  N+L TL + I   + L E                    L +L +
Sbjct: 261 DGLGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFLLELPVTIGKLHNLNNLNV 320

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDNPL 280
             N L++LPTEI  LK L  LSLRDN L
Sbjct: 321 DRNSLQSLPTEIGNLKQLGVLSLRDNKL 348



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 116/226 (51%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E + +L L  N L   P++ S+   L  LDL +N I  LP  I   P L  L   +N L 
Sbjct: 152 EALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQL- 210

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            + LP ++  LK L   ++S N+LE  P +I  + +L  L+L  N +  +P  + +L KL
Sbjct: 211 -QHLPPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELQKL 269

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L +  N L+ +    G    L+ LIL++N L  LP +I  L  L +L +  N L++LP
Sbjct: 270 TILKVDQNRLSTLNSNIGRCENLQELILTENFLLELPVTIGKLHNLNNLNVDRNSLQSLP 329

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           TEI  LK    +L  L L +NKL+ LP E+     L  L +  N L
Sbjct: 330 TEIGNLK----QLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRL 371



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 96/215 (44%), Gaps = 29/215 (13%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP 102
           IE+LP +   K P  +  L L HN L   P    +   L  LD+S NR+  LP+ I    
Sbjct: 187 IEVLPAH-IGKLPA-LQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEIGGLE 244

Query: 103 -LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE---------------------- 139
            L+ L    N++  E LP  +  L+ L +  +  N+L                       
Sbjct: 245 SLTDLHLSQNVI--EKLPDGLGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFL 302

Query: 140 -QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
            + P+ I  +  L  L +  NSL  +P EI  L +L VLSL  N L  +P   G    L 
Sbjct: 303 LELPVTIGKLHNLNNLNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEVGQCTALH 362

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
            L +S N+L+ LP S+ NL  LK++ L  N+ + +
Sbjct: 363 VLDVSGNRLQYLPYSLINLN-LKAVWLSKNQAQPM 396



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 15/192 (7%)

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           ++L+   L  N +   P     +  L+ L L +N ++ +P +I     L  L +  N + 
Sbjct: 37  RSLEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIP 96

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           DIP+   +L  L+    S N +  LPA    L+ L  L L++  L  LP +  +L    E
Sbjct: 97  DIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSL----E 152

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKV 305
            L+SL L  N L++LP  +  L  L  L L DN   I  +     K P+L EL       
Sbjct: 153 ALQSLELRENLLKSLPESLSQLYKLERLDLGDND--IEVLPAHIGKLPALQELW------ 204

Query: 306 HEIDYSQ-EHLP 316
             +D++Q +HLP
Sbjct: 205 --LDHNQLQHLP 214


>gi|335292043|ref|XP_001927723.2| PREDICTED: leucine-rich repeat-containing protein 1 [Sus scrofa]
          Length = 524

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 117/209 (55%), Gaps = 7/209 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 211 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKKLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+  GD   L  L+L++N+L +LP SI  LK L +L    NKL +LP 
Sbjct: 270 ILKVDQNRLTQLPEAIGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPK 329

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           EI    C S  L    + +N+L  +P E+
Sbjct: 330 EIG--GCCS--LTVFCVRDNRLTRIPAEV 354



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 116/224 (51%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN++  
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDI-- 94

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+ +S  K L++ + SGN L + P    ++  L  L + + SL  +P  I  L  L
Sbjct: 95  -PEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNL 153

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +PD+   L +LE L L +N++ +LP SI  L  LK L L  N+L  LP
Sbjct: 154 ASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELP 213

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK     L  L +  N+L  LP EI  L  L++L +  N
Sbjct: 214 QEIGNLK----NLLCLDVSENRLERLPEEISGLTSLTDLVISQN 253



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 125/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N++   P++ S    L+  D S N +T LP++  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 126 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 185 EIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 244

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTL 260
           L  L++  N L  LP  I  LK LS                   E L  L+L  N+L TL
Sbjct: 245 LTDLVISQNLLEMLPDGIGKLKKLSILKVDQNRLTQLPEAIGDCESLTELVLTENRLLTL 304

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK LS L+   N LV
Sbjct: 305 PKSIGKLKKLSNLNADRNKLV 325



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 101/203 (49%), Gaps = 8/203 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ ++D  +  + ++P+ I  +   L  L+   N L    LP+    L  L+   LS N+
Sbjct: 13  HVETIDKRHCSLVYVPEEIYRYARSLEELLLDANQL--RELPEQFFQLVKLRKLGLSDNE 70

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           +++ P +I +   L  L +  N +  +P  I+    L +    GN LT +P++F +L  L
Sbjct: 71  IQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNL 130

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
             L ++D  L+SLP +I NL  L SL L  N L  LP  +  L+    +L+ L L NN++
Sbjct: 131 TCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLR----RLEELDLGNNEI 186

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
             LP  I  L  L +L L  N L
Sbjct: 187 YNLPESIGALLHLKDLWLDGNQL 209


>gi|261858318|dbj|BAI45681.1| leucine rich repeat containing 1 [synthetic construct]
          Length = 524

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/209 (36%), Positives = 117/209 (55%), Gaps = 7/209 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP+++     L  L    N L+ 
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESVGALLHLKDLWLDGNQLS- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 211 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+  G+   L  L+L++NQL +LP SI  LK L +L    NKL +LP 
Sbjct: 270 ILKVDQNRLTQLPEAVGECESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPK 329

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           EI    C S  L    + +N+L  +P E+
Sbjct: 330 EIG--GCCS--LTVFCVRDNRLTRIPAEV 354



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 115/224 (51%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN +  
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEI-- 94

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+ +S  K L+V + SGN L + P    ++  L  L + + SL  +P  I  L  L
Sbjct: 95  -PEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNL 153

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +PD+   L +LE L L +N++ +LP S+  L  LK L L  N+L  LP
Sbjct: 154 ASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESVGALLHLKDLWLDGNQLSELP 213

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK     L  L +  N+L  LP EI  L  L++L +  N
Sbjct: 214 QEIGNLK----NLLCLDVSENRLERLPEEISGLTSLTDLVISQN 253



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/242 (31%), Positives = 122/242 (50%), Gaps = 11/242 (4%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N +   P++ S    L+  D S N +T LP++  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 126 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P  +  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 185 EIYNLPESVGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 244

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L  L++  N L T+P  I  LK    KL  L +  N+L  LP  +   + L+EL L +N 
Sbjct: 245 LTDLVISQNLLETIPDGIGKLK----KLSILKVDQNRLTQLPEAVGECESLTELVLTENQ 300

Query: 280 LV 281
           L+
Sbjct: 301 LL 302



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 101/203 (49%), Gaps = 8/203 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ S+D  +  + ++P+ I  +   L  L+   N L    LP+    L  L+   LS N+
Sbjct: 13  HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQL--RELPEQFFQLVKLRKLGLSDNE 70

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           +++ P +I +   L  L +  N +  +P  I+    L V    GN LT +P++F +L  L
Sbjct: 71  IQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNL 130

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
             L ++D  L+SLP +I NL  L SL L  N L  LP  +  L+    +L+ L L NN++
Sbjct: 131 TCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLR----RLEELDLGNNEI 186

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
             LP  +  L  L +L L  N L
Sbjct: 187 YNLPESVGALLHLKDLWLDGNQL 209


>gi|424843897|ref|ZP_18268522.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
 gi|395322095|gb|EJF55016.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
          Length = 736

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 134/239 (56%), Gaps = 10/239 (4%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           Q++ LP N Y  + + +  L L  N LS       +F  L+ L L++N++  LP  I+N 
Sbjct: 459 QLKELPANFY--ELQKLQYLNLEGNQLSSLAPEIGQFKELKLLILAHNQLKELPSTISNC 516

Query: 102 P-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
             ++ L  ++NL+    +  ++  +K L + NLS N L+  P  I     L++L L NN 
Sbjct: 517 KKITYLNIQDNLV--RQIQFNLEKMKQLTLLNLSDNLLQALPSSIFQAKKLQFLQLDNNR 574

Query: 161 -LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L  +  +I +L  L  L L   S+  IP+  G L QL+ L LS+NQL+ LP +I  L  
Sbjct: 575 DLQQLSPKIGQLQNLKTLWLNHCSIQKIPENIGQLTQLQELYLSNNQLQDLPITIGQLTQ 634

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           L+ L L+NN+L++LP  I  LK L    K+L L+NN+L++LP  I+ L  L++L LR+N
Sbjct: 635 LQKLHLNNNQLQSLPENIGQLKAL----KTLTLNNNQLKSLPKSIVQLTLLTDLELRNN 689



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 112/225 (49%), Gaps = 8/225 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAE 116
           +  L L  N L   P N  +   L+ L+L  N+++ L   I  F  L  LI  +N L  +
Sbjct: 450 LSGLQLSKNQLKELPANFYELQKLQYLNLEGNQLSSLAPEIGQFKELKLLILAHNQL--K 507

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            LP  +SN K +   N+  N + Q    +  +  L  L L +N L  +P  I +  KL  
Sbjct: 508 ELPSTISNCKKITYLNIQDNLVRQIQFNLEKMKQLTLLNLSDNLLQALPSSIFQAKKLQF 567

Query: 177 LSLGGNS-LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           L L  N  L  +    G L  L+ L L+   ++ +P +I  L  L+ L L NN+L+ LP 
Sbjct: 568 LQLDNNRDLQQLSPKIGQLQNLKTLWLNHCSIQKIPENIGQLTQLQELYLSNNQLQDLP- 626

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             IT+  L++ L+ L L+NN+L++LP  I  LK L  L+L +N L
Sbjct: 627 --ITIGQLTQ-LQKLHLNNNQLQSLPENIGQLKALKTLTLNNNQL 668



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 55/156 (35%), Positives = 80/156 (51%)

Query: 74  NASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNL 133
           N  K   L  L+LS+N +  LP +I        +  +N    + L   +  L+NLK   L
Sbjct: 535 NLEKMKQLTLLNLSDNLLQALPSSIFQAKKLQFLQLDNNRDLQQLSPKIGQLQNLKTLWL 594

Query: 134 SGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGD 193
           +   +++ P  I  +  L+ LYL NN L  +P  I +L +L  L L  N L  +P+  G 
Sbjct: 595 NHCSIQKIPENIGQLTQLQELYLSNNQLQDLPITIGQLTQLQKLHLNNNQLQSLPENIGQ 654

Query: 194 LYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           L  L+ L L++NQL+SLP SI  L +L  L L NNK
Sbjct: 655 LKALKTLTLNNNQLKSLPKSIVQLTLLTDLELRNNK 690



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 58/166 (34%), Positives = 84/166 (50%), Gaps = 10/166 (6%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           E+LP+D   L  L   NL   QL++ P     +  L  L L  N L  +P    +L KL 
Sbjct: 415 EALPEDFGQLSKLCQLNLDQCQLKRLPSSFGQLQMLSGLQLSKNQLKELPANFYELQKLQ 474

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L+L GN L+ +    G   +L+ LIL+ NQL+ LP++ISN K +  L + +N +R +  
Sbjct: 475 YLNLEGNQLSSLAPEIGQFKELKLLILAHNQLKELPSTISNCKKITYLNIQDNLVRQIQF 534

Query: 236 EIITLKCLSEKLKSLLLHN---NKLRTLPTEIITLKCLSELSLRDN 278
            +       EK+K L L N   N L+ LP+ I   K L  L L +N
Sbjct: 535 NL-------EKMKQLTLLNLSDNLLQALPSSIFQAKKLQFLQLDNN 573



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 73/230 (31%), Positives = 110/230 (47%), Gaps = 31/230 (13%)

Query: 76  SKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN-NLLTAESLPKDMSNLKNLKVFNLS 134
           S+F +L  LDL  ++I  LP+      LS L   N +    + LP     L+ L    LS
Sbjct: 399 SQFKDLEYLDLEQSQIEALPEDFGQ--LSKLCQLNLDQCQLKRLPSSFGQLQMLSGLQLS 456

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGD- 193
            NQL++ P    ++  L+YL L  N L+ +  EI +  +L +L L  N L ++P T  + 
Sbjct: 457 KNQLKELPANFYELQKLQYLNLEGNQLSSLAPEIGQFKELKLLILAHNQLKELPSTISNC 516

Query: 194 ----------------------LYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK-L 230
                                 + QL  L LSDN L++LP+SI   K L+ L L NN+ L
Sbjct: 517 KKITYLNIQDNLVRQIQFNLEKMKQLTLLNLSDNLLQALPSSIFQAKKLQFLQLDNNRDL 576

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           + L  +I  L    + LK+L L++  ++ +P  I  L  L EL L +N L
Sbjct: 577 QQLSPKIGQL----QNLKTLWLNHCSIQKIPENIGQLTQLQELYLSNNQL 622



 Score = 42.4 bits (98), Expect = 0.40,   Method: Compositional matrix adjust.
 Identities = 31/106 (29%), Positives = 57/106 (53%), Gaps = 1/106 (0%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           L +++  LKNL++ +L+  +L+Q    +  +  L+ L L  N  +++P E+    KLH L
Sbjct: 155 LHREIGQLKNLRILSLTYGRLQQLHKALGQLTKLEELCLSFNMFHNIPEELALAPKLHTL 214

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL 223
            L  + +  +PD    L +++ L L+      L A ++ LK LK+L
Sbjct: 215 YLDQSPIDSLPDDLSVLSKIKRLSLARRSCTKL-APLAQLKQLKAL 259


>gi|418708997|ref|ZP_13269797.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770927|gb|EKR46140.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 595

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 124/249 (49%), Gaps = 24/249 (9%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLL 113
           +N+  L L  N L+  P    +  NL+ LDL +N++   P  I     L +L ++ N L+
Sbjct: 71  KNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLI 130

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L+NL+   L  N+L  FP +I  +  L+ L+L  N L  +P+EI +L  
Sbjct: 131 I---LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKN 187

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N  T +P   G L  L+ L LSDNQL +LP  I  L+ L+ L L NN+L   
Sbjct: 188 LQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQKLYLRNNRLTVF 247

Query: 234 PTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           P EI  L+ L                    + L++L L NN+L   P EI  L+ L +L 
Sbjct: 248 PKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLE 307

Query: 275 LRDNPLVIR 283
           L  NPL ++
Sbjct: 308 LLMNPLSLK 316



 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/213 (38%), Positives = 117/213 (54%), Gaps = 5/213 (2%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKV 130
           FP    KF NLR L+L +   + LP+ I+       +A   L   +++P ++  LKNL+ 
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALG-LNGLKNIPSEIGQLKNLEA 426

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NL  N+LE+ P +I  +  L+ L L  N+L   P EI +L KL  L L  N  T  P  
Sbjct: 427 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
            G L  L+ L L  NQL +L A I  L+ L+ L L++N+   LP EI  LK    KL++L
Sbjct: 487 IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLK----KLQTL 542

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
            L NN+L TLPTEI  L+ L  L L++N L ++
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLK 575



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 112/221 (50%), Gaps = 11/221 (4%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N+  L LY    S  P   S+  NL+ L L  N + ++P  I     L  L    N 
Sbjct: 374 KFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE 433

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L  E LPK++  L+NL+  +L  N L+ FP +I  +  L+ L L  N     P+EI KL 
Sbjct: 434 L--ERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLE 491

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L+L  N LT++    G L  L+ L L+DNQ   LP  I  LK L++L L NN+L T
Sbjct: 492 NLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTT 551

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTE----IITLKC 269
           LPTEI  L    + L+ L L NN+L     E    ++ LKC
Sbjct: 552 LPTEIGQL----QNLQWLYLQNNQLSLKEQERIRKLLPLKC 588



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 116/261 (44%), Gaps = 44/261 (16%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNN--------RITHLPQAITNFPLSTL- 106
           +N+ TL L +N L+ FP    +  NL+ L+L  N        RI  L      FP S L 
Sbjct: 278 QNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKL------FPDSNLD 331

Query: 107 ---IARNNLLT----------------------AESLPKDMSNLKNLKVFNLSGNQLEQF 141
              +A N +                        ++S PK +   +NL+  NL        
Sbjct: 332 LREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTL 391

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P +I  +  LKYL LG N L ++P EI +L  L  L+L  N L  +P   G L  L+ L 
Sbjct: 392 PKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLS 451

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           L  N L+  PA I  LK L+ L L  N+  T P EI  L    E L++L L  N+L  L 
Sbjct: 452 LHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKL----ENLQTLNLQRNQLTNLT 507

Query: 262 TEIITLKCLSELSLRDNPLVI 282
            EI  L+ L EL L DN   +
Sbjct: 508 AEIGQLQNLQELDLNDNQFTV 528



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 90/169 (53%), Gaps = 4/169 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  N++V NLSG +L   P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 36  TYMDLTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L   P    +L +LE+L LS+N+L  LP  I  L+ L+ L L+ NKL T 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  L    + L+ L L  N+L  LP EI  LK L  L L+DN   I
Sbjct: 156 PKEIGQL----QNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTI 200


>gi|124004944|ref|ZP_01689787.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123989622|gb|EAY29168.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 384

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/221 (38%), Positives = 118/221 (53%), Gaps = 7/221 (3%)

Query: 59  DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAES 117
           + L L H NL+  P        L+ L+LS+N++T+LP  IT    L  L  RNN LT   
Sbjct: 149 NQLFLKHFNLTRLPKEICLLKGLKVLNLSDNQLTNLPAEITELRDLEELNLRNNQLT--E 206

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LP  +  L NL+   L  NQL   P +I  + +L+ LYL +N L ++P E+ +L  L  L
Sbjct: 207 LPDKVIELTNLRELWLGTNQLVGLPPEIGQLFSLQNLYLYDNQLENLPLEVGQLVSLRNL 266

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            L  N L  +P   G+L  L  L+LS N+L +LP  I  L  L+ L L NN+L+ LP EI
Sbjct: 267 YLDNNELLTLPAEIGNLTNLRELVLSYNRLITLPIRIGELAQLEVLYLQNNQLKRLPEEI 326

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             L+ L E    L + NN++  LP EI  L  L  L  ++N
Sbjct: 327 GLLQNLEE----LYIENNRITHLPEEIAQLSQLKYLYAQNN 363



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/175 (32%), Positives = 83/175 (47%), Gaps = 22/175 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI----------------TN 100
           +++ L L +N L+  PD   + TNLR L L  N++  LP  I                 N
Sbjct: 193 DLEELNLRNNQLTELPDKVIELTNLRELWLGTNQLVGLPPEIGQLFSLQNLYLYDNQLEN 252

Query: 101 FPLST--LIARNNLLTAE----SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYL 154
            PL    L++  NL        +LP ++ NL NL+   LS N+L   PI+I ++  L+ L
Sbjct: 253 LPLEVGQLVSLRNLYLDNNELLTLPAEIGNLTNLRELVLSYNRLITLPIRIGELAQLEVL 312

Query: 155 YLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
           YL NN L  +P EI  L  L  L +  N +T +P+    L QL+ L   +N   S
Sbjct: 313 YLQNNQLKRLPEEIGLLQNLEELYIENNRITHLPEEIAQLSQLKYLYAQNNMFSS 367



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/108 (35%), Positives = 54/108 (50%), Gaps = 3/108 (2%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L +N L   P      TNLR L LS NR+  LP  I     L  L  +NN L  + LP
Sbjct: 266 LYLDNNELLTLPAEIGNLTNLRELVLSYNRLITLPIRIGELAQLEVLYLQNNQL--KRLP 323

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE 167
           +++  L+NL+   +  N++   P +I  +  LKYLY  NN  +   +E
Sbjct: 324 EEIGLLQNLEELYIENNRITHLPEEIAQLSQLKYLYAQNNMFSSGEKE 371



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 38/87 (43%), Positives = 45/87 (51%), Gaps = 4/87 (4%)

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
           Y+   L L    L  LP  I  LK LK L L +N+L  LP EI  L+ L E    L L N
Sbjct: 146 YRGNQLFLKHFNLTRLPKEICLLKGLKVLNLSDNQLTNLPAEITELRDLEE----LNLRN 201

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPLV 281
           N+L  LP ++I L  L EL L  N LV
Sbjct: 202 NQLTELPDKVIELTNLRELWLGTNQLV 228


>gi|260819564|ref|XP_002605106.1| hypothetical protein BRAFLDRAFT_123770 [Branchiostoma floridae]
 gi|229290437|gb|EEN61116.1| hypothetical protein BRAFLDRAFT_123770 [Branchiostoma floridae]
          Length = 586

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/236 (33%), Positives = 127/236 (53%), Gaps = 18/236 (7%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIAR--NNLLT 114
           N+  L + +N++ + PD+    T L+ + ++ N+I  LP  I N     L  R  N++  
Sbjct: 347 NLKELYIGNNSIEYIPDDICILTELQIVAMTGNKIDSLPVEIANLKRVLLCYRLLNSVTC 406

Query: 115 A------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLN 162
           +            +SLP +++NLK ++ F L+ NQ++  P+ +  +  L+ L L  N + 
Sbjct: 407 SVFQIVAMTGNKIDSLPVEIANLKRVQQFGLNHNQMDHLPLGMCSMYDLQLLSLEGNRIP 466

Query: 163 HVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKS 222
            +P E + L  +  L L  NSL D PD    L QLE L +++NQ++ +PA IS+L+ L+ 
Sbjct: 467 ELPSEFSNLVHIKQLELSSNSLEDFPDCLCVLVQLEYLGMNNNQVDQVPAEISHLRKLRV 526

Query: 223 LLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            LL+ N+ R LP EI TL+    KL+ L L  N +  +  E+  L  L+ELSL  N
Sbjct: 527 FLLNGNQFRDLPKEICTLR----KLERLGLSRNLITKVAVEVKKLDNLTELSLNHN 578



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 86/252 (34%), Positives = 127/252 (50%), Gaps = 36/252 (14%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L+   L+  P +      L  L L NN I+H+P+ I     +  L  ++N LT  SLP  
Sbjct: 40  LHGRELTEIPPDIFNMDELNCLFLGNNGISHVPRDIRRLNKVQVLAIQDNQLT--SLPPT 97

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           M +L+ +KV  +SGNQL + P  I ++  L  LY   NSL+ +P E+  L +L VL L  
Sbjct: 98  MFHLEAMKVLEVSGNQLTELPGDIGNLKQLNQLYANRNSLSSLPDEVCSLQQLEVLGLND 157

Query: 182 --------------NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
                         N+L+ +PD    L QLE L L+DN++ SLPA I  L  +K L L N
Sbjct: 158 NLFPSLSPCSYANRNNLSSLPDEVCSLQQLEVLGLNDNEITSLPAGIRGLTKMKILGLDN 217

Query: 228 NKLRTLPTEIITLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLK 268
           N+L  +P  I  L  L +                    L+ LLL++N+++ LP ++  L+
Sbjct: 218 NRLERVPKGICELDELIKLGLSGNGLKHLPAEMENLSNLRELLLNDNEIQYLPVQLYWLE 277

Query: 269 CLSELSLRDNPL 280
           CL EL+L +N L
Sbjct: 278 CLEELALSNNQL 289



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 124/245 (50%), Gaps = 18/245 (7%)

Query: 37  ETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHL-P 95
           E    Q+  LP +  N K   ++ L    N+LS  PD       L  L L++N    L P
Sbjct: 108 EVSGNQLTELPGDIGNLK--QLNQLYANRNSLSSLPDEVCSLQQLEVLGLNDNLFPSLSP 165

Query: 96  QAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLY 155
            +  N        RNNL    SLP ++ +L+ L+V  L+ N++   P  I  +  +K L 
Sbjct: 166 CSYAN--------RNNL---SSLPDEVCSLQQLEVLGLNDNEITSLPAGIRGLTKMKILG 214

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           L NN L  VP+ I +L +L  L L GN L  +P    +L  L  L+L+DN+++ LP  + 
Sbjct: 215 LDNNRLERVPKGICELDELIKLGLSGNGLKHLPAEMENLSNLRELLLNDNEIQYLPVQLY 274

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            L+ L+ L L NN+L++L  +I  LK    +L+ L L++N L  LP EI  L CL  L L
Sbjct: 275 WLECLEELALSNNQLKSLSPQIGRLK----ELRILGLNSNHLEVLPDEICELSCLETLGL 330

Query: 276 RDNPL 280
             N L
Sbjct: 331 DSNRL 335



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 67/215 (31%), Positives = 115/215 (53%), Gaps = 9/215 (4%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           + ++ L L  N ++  P      T ++ L L NNR+  +P+ I      +   ++ N L 
Sbjct: 185 QQLEVLGLNDNEITSLPAGIRGLTKMKILGLDNNRLERVPKGICELDELIKLGLSGNGL- 243

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
             + LP +M NL NL+   L+ N+++  P+Q+  +  L+ L L NN L  +  +I +L +
Sbjct: 244 --KHLPAEMENLSNLRELLLNDNEIQYLPVQLYWLECLEELALSNNQLKSLSPQIGRLKE 301

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N L  +PD   +L  LE L L  N+L++LP  +++L  LK L + NN +  +
Sbjct: 302 LRILGLNSNHLEVLPDEICELSCLETLGLDSNRLKALPEHMASLVNLKELYIGNNSIEYI 361

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLK 268
           P +I    C+  +L+ + +  NK+ +LP EI  LK
Sbjct: 362 PDDI----CILTELQIVAMTGNKIDSLPVEIANLK 392



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 63/177 (35%), Positives = 95/177 (53%), Gaps = 23/177 (12%)

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            +L G +L + P  I ++  L  L+LGNN ++HVPR+I +L K+ VL++  N LT +P T
Sbjct: 38  LSLHGRELTEIPPDIFNMDELNCLFLGNNGISHVPRDIRRLNKVQVLAIQDNQLTSLPPT 97

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
              L  ++ L +S NQL  LP  I NLK L  L  + N L +LP E+ +L    ++L+ L
Sbjct: 98  MFHLEAMKVLEVSGNQLTELPGDIGNLKQLNQLYANRNSLSSLPDEVCSL----QQLEVL 153

Query: 251 LLHN--------------NKLRTLPTEIITLKCLSELSLRDN-----PLVIRFVSDM 288
            L++              N L +LP E+ +L+ L  L L DN     P  IR ++ M
Sbjct: 154 GLNDNLFPSLSPCSYANRNNLSSLPDEVCSLQQLEVLGLNDNEITSLPAGIRGLTKM 210



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 78/285 (27%), Positives = 125/285 (43%), Gaps = 68/285 (23%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E ++ L L +N L        +   LR L L++N +  LP  I     L TL   +N L 
Sbjct: 277 ECLEELALSNNQLKSLSPQIGRLKELRILGLNSNHLEVLPDEICELSCLETLGLDSNRLK 336

Query: 115 AESLPKDMSNLKNLK-----------------------VFNLSGNQLEQFPIQI------ 145
           A  LP+ M++L NLK                       +  ++GN+++  P++I      
Sbjct: 337 A--LPEHMASLVNLKELYIGNNSIEYIPDDICILTELQIVAMTGNKIDSLPVEIANLKRV 394

Query: 146 -----------------------------LDIPTLKYLY---LGNNSLNHVPREINKLCK 173
                                        ++I  LK +    L +N ++H+P  +  +  
Sbjct: 395 LLCYRLLNSVTCSVFQIVAMTGNKIDSLPVEIANLKRVQQFGLNHNQMDHLPLGMCSMYD 454

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +LSL GN + ++P  F +L  ++ L LS N LE  P  +  L  L+ L ++NN++  +
Sbjct: 455 LQLLSLEGNRIPELPSEFSNLVHIKQLELSSNSLEDFPDCLCVLVQLEYLGMNNNQVDQV 514

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P EI  L+    KL+  LL+ N+ R LP EI TL+ L  L L  N
Sbjct: 515 PAEISHLR----KLRVFLLNGNQFRDLPKEICTLRKLERLGLSRN 555



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 68/212 (32%), Positives = 103/212 (48%), Gaps = 21/212 (9%)

Query: 84  LDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
           L L    +T +P  I N   L+ L   NN ++   +P+D+  L  ++V  +  NQL   P
Sbjct: 38  LSLHGRELTEIPPDIFNMDELNCLFLGNNGIS--HVPRDIRRLNKVQVLAIQDNQLTSLP 95

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
             +  +  +K L +  N L  +P +I  L +L+ L    NSL+ +PD    L QLE L L
Sbjct: 96  PTMFHLEAMKVLEVSGNQLTELPGDIGNLKQLNQLYANRNSLSSLPDEVCSLQQLEVLGL 155

Query: 203 SD--------------NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLK 248
           +D              N L SLP  + +L+ L+ L L++N++ +LP  I  L     K+K
Sbjct: 156 NDNLFPSLSPCSYANRNNLSSLPDEVCSLQQLEVLGLNDNEITSLPAGIRGLT----KMK 211

Query: 249 SLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            L L NN+L  +P  I  L  L +L L  N L
Sbjct: 212 ILGLDNNRLERVPKGICELDELIKLGLSGNGL 243



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 86/172 (50%), Gaps = 3/172 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTAESLPKDMSN 124
           N +   P   +    ++   L++N++ HLP  + + + L  L    N +    LP + SN
Sbjct: 417 NKIDSLPVEIANLKRVQQFGLNHNQMDHLPLGMCSMYDLQLLSLEGNRIP--ELPSEFSN 474

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L ++K   LS N LE FP  +  +  L+YL + NN ++ VP EI+ L KL V  L GN  
Sbjct: 475 LVHIKQLELSSNSLEDFPDCLCVLVQLEYLGMNNNQVDQVPAEISHLRKLRVFLLNGNQF 534

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
            D+P     L +LE L LS N +  +   +  L  L  L L++N+    PT+
Sbjct: 535 RDLPKEICTLRKLERLGLSRNLITKVAVEVKKLDNLTELSLNHNQFTDFPTQ 586


>gi|418706465|ref|ZP_13267313.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|410764090|gb|EKR34809.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
          Length = 267

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 80/200 (40%), Positives = 117/200 (58%), Gaps = 7/200 (3%)

Query: 81  LRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
           +R LDLS  + T LP+ I     L  L  R+N LT  +LP+++  L+NLK+ +++ N++ 
Sbjct: 50  VRILDLSRKQRTTLPKEIGQLVNLERLNLRDNKLT--NLPEEIGELENLKILDITRNKIS 107

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
            FP +   +  L+ L L  NSL+++P EI +L  L +L +  N ++  P  F  L  LE 
Sbjct: 108 TFPKEFWKLKNLEVLLLNGNSLSNLPEEIGELENLKILDITRNKISTFPKEFWKLKNLEV 167

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRT 259
           L+L+ N L +LP  I  L+ L  L L+NN+L TLP EI  L    E L SL L +NKL +
Sbjct: 168 LLLNGNSLSNLPEEIGELEKLGILYLNNNQLTTLPKEIGQL----ENLVSLSLSSNKLTS 223

Query: 260 LPTEIITLKCLSELSLRDNP 279
           +P E+  LK L  L+L DNP
Sbjct: 224 IPDELGQLKKLRILNLWDNP 243



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/211 (37%), Positives = 116/211 (54%), Gaps = 9/211 (4%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARN 110
           K P  +  L L     +  P    +  NL  L+L +N++T+LP+ I     L  L I RN
Sbjct: 45  KTPNEVRILDLSRKQRTTLPKEIGQLVNLERLNLRDNKLTNLPEEIGELENLKILDITRN 104

Query: 111 NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
            + T    PK+   LKNL+V  L+GN L   P +I ++  LK L +  N ++  P+E  K
Sbjct: 105 KIST---FPKEFWKLKNLEVLLLNGNSLSNLPEEIGELENLKILDITRNKISTFPKEFWK 161

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L VL L GNSL+++P+  G+L +L  L L++NQL +LP  I  L+ L SL L +NKL
Sbjct: 162 LKNLEVLLLNGNSLSNLPEEIGELEKLGILYLNNNQLTTLPKEIGQLENLVSLSLSSNKL 221

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
            ++P E+  LK    KL+ L L +N   T P
Sbjct: 222 TSIPDELGQLK----KLRILNLWDNPTLTTP 248



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/172 (35%), Positives = 85/172 (49%), Gaps = 19/172 (11%)

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           +++ +LS  Q    P +I  +  L+ L L +N L ++P EI +L  L +L +  N ++  
Sbjct: 50  VRILDLSRKQRTTLPKEIGQLVNLERLNLRDNKLTNLPEEIGELENLKILDITRNKISTF 109

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS--- 244
           P  F  L  LE L+L+ N L +LP  I  L+ LK L +  NK+ T P E   LK L    
Sbjct: 110 PKEFWKLKNLEVLLLNGNSLSNLPEEIGELENLKILDITRNKISTFPKEFWKLKNLEVLL 169

Query: 245 ----------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
                           EKL  L L+NN+L TLP EI  L+ L  LSL  N L
Sbjct: 170 LNGNSLSNLPEEIGELEKLGILYLNNNQLTTLPKEIGQLENLVSLSLSSNKL 221



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 74/137 (54%), Gaps = 3/137 (2%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N++ LLL  N+LS  P+   +  NL+ LD++ N+I+  P+       L  L+   N 
Sbjct: 115 KLKNLEVLLLNGNSLSNLPEEIGELENLKILDITRNKISTFPKEFWKLKNLEVLLLNGNS 174

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L+  +LP+++  L+ L +  L+ NQL   P +I  +  L  L L +N L  +P E+ +L 
Sbjct: 175 LS--NLPEEIGELEKLGILYLNNNQLTTLPKEIGQLENLVSLSLSSNKLTSIPDELGQLK 232

Query: 173 KLHVLSLGGNSLTDIPD 189
           KL +L+L  N     P+
Sbjct: 233 KLRILNLWDNPTLTTPE 249


>gi|291231680|ref|XP_002735791.1| PREDICTED: leucine rich repeat containing 7-like [Saccoglossus
           kowalevskii]
          Length = 839

 Score =  113 bits (282), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 101/334 (30%), Positives = 152/334 (45%), Gaps = 37/334 (11%)

Query: 24  IKTLDFSYSSLDSETLATQIELLPN----NDYNKKPENIDT----------LLLYHNNLS 69
           I+  D   S    + L  QI  +PN    N  N K ++I            L L +N L 
Sbjct: 307 IELCDLQLSDNQIQYLPIQIYWIPNLEELNLSNNKIQDISCEIIKLTKLRILGLNNNALE 366

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNL 128
             PD   +  NL  L +  N++  +P  + N   L  +   NN L  ES+P D+  L ++
Sbjct: 367 RLPDEICQLPNLELLGVDGNKLKEIPDLVCNLLALKEIYFSNNCL--ESVPDDVCLLSDV 424

Query: 129 KVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
           ++  L GN ++  PI+I ++  L +L L NN L+H P  +  L ++ VL++  N +T IP
Sbjct: 425 EILFLGGNAMKTLPIEITNMKRLSHLTLDNNQLDHFPLGLCSLAEVQVLNIDDNDITHIP 484

Query: 189 DTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLK 248
               ++  L+ L LS+N++++ P  I  L+ LK+L +  N LR LPTEI  L      LK
Sbjct: 485 AEIENMSHLQHLTLSNNKIQTFPLGICRLESLKTLDVSGNDLRELPTEIKKLI----NLK 540

Query: 249 SLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEI 308
            L L+ NK    P  +  L  L +L L  N +V    S   +   SL E+       H  
Sbjct: 541 ELFLNQNKFEVFPAVVCRLHSLEKLHLCGNGMVSVEESTELHHLKSLQEM-------HLS 593

Query: 309 DYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNR 342
           D    H P  L         CV    K + FD +
Sbjct: 594 DNKFPHFPNEL---------CVISNLKTLHFDQK 618



 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 86/225 (38%), Positives = 119/225 (52%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L++ +NN+   P +    T L  L+LS N +T +P+ I     L  L   +N L  
Sbjct: 170 NLEVLMIQNNNIESLPKDIGSLTKLEVLELSYNELTSIPKEIGQLEKLKQLYLNHNKL-- 227

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ES+PK+M  L  L V  LS NQL   P +I  +  L  L L NNSL  +P+ I  L +L 
Sbjct: 228 ESIPKEMGKLSELTVLGLSSNQLTSLPSEISLMKQLTNLGLNNNSLGCIPKSICYLEQLI 287

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L GN+L  +P    +  +L  L LSDNQ++ LP  I  +  L+ L L NNK++ +  
Sbjct: 288 KLGLSGNNLQTLPSVIENWIELCDLQLSDNQIQYLPIQIYWIPNLEELNLSNNKIQDISC 347

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EII L     KL+ L L+NN L  LP EI  L  L  L +  N L
Sbjct: 348 EIIKLT----KLRILGLNNNALERLPDEICQLPNLELLGVDGNKL 388



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 96/276 (34%), Positives = 138/276 (50%), Gaps = 8/276 (2%)

Query: 7   SSSSSDSSDSDSFKTVSIKTLDFSYSSLDS-ETLATQIELLPNNDYNKKPENIDTLLLYH 65
           + SSS   D D      I+  +FS    DS      +I L P  +  K       + L  
Sbjct: 73  TVSSSTQYDPDIVNDNVIENDNFSVDYDDSIMKEMIEINLEPEVNMIKSSNGKYCVNLSG 132

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
             L   P        L+ L +SNN IT++P  I+N   L  L+ +NN    ESLPKD+ +
Sbjct: 133 QCLHRIPKQVFNLEQLQCLFISNNNITYIPPEISNLVNLEVLMIQNN--NIESLPKDIGS 190

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L  L+V  LS N+L   P +I  +  LK LYL +N L  +P+E+ KL +L VL L  N L
Sbjct: 191 LTKLEVLELSYNELTSIPKEIGQLEKLKQLYLNHNKLESIPKEMGKLSELTVLGLSSNQL 250

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T +P     + QL  L L++N L  +P SI  L+ L  L L  N L+TLP+ I       
Sbjct: 251 TSLPSEISLMKQLTNLGLNNNSLGCIPKSICYLEQLIKLGLSGNNLQTLPSVIENWI--- 307

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L  L L +N+++ LP +I  +  L EL+L +N +
Sbjct: 308 -ELCDLQLSDNQIQYLPIQIYWIPNLEELNLSNNKI 342



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 120/247 (48%), Gaps = 26/247 (10%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E +  L L HN L   P    K + L  L LS+N++T LP  I+    L+ L   NN L 
Sbjct: 215 EKLKQLYLNHNKLESIPKEMGKLSELTVLGLSSNQLTSLPSEISLMKQLTNLGLNNNSLG 274

Query: 115 A---------------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKY 153
                                 ++LP  + N   L    LS NQ++  PIQI  IP L+ 
Sbjct: 275 CIPKSICYLEQLIKLGLSGNNLQTLPSVIENWIELCDLQLSDNQIQYLPIQIYWIPNLEE 334

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           L L NN +  +  EI KL KL +L L  N+L  +PD    L  LE L +  N+L+ +P  
Sbjct: 335 LNLSNNKIQDISCEIIKLTKLRILGLNNNALERLPDEICQLPNLELLGVDGNKLKEIPDL 394

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           + NL  LK +   NN L ++P ++    CL   ++ L L  N ++TLP EI  +K LS L
Sbjct: 395 VCNLLALKEIYFSNNCLESVPDDV----CLLSDVEILFLGGNAMKTLPIEITNMKRLSHL 450

Query: 274 SLRDNPL 280
           +L +N L
Sbjct: 451 TLDNNQL 457



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 77/269 (28%), Positives = 114/269 (42%), Gaps = 50/269 (18%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L +N L  FP        ++ L++ +N ITH+P  I N   L  L   NN    ++ P
Sbjct: 450 LTLDNNQLDHFPLGLCSLAEVQVLNIDDNDITHIPAEIENMSHLQHLTLSNN--KIQTFP 507

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             +  L++LK  ++SGN L + P +I  +  LK L+L  N     P  + +L  L  L L
Sbjct: 508 LGICRLESLKTLDVSGNDLRELPTEIKKLINLKELFLNQNKFEVFPAVVCRLHSLEKLHL 567

Query: 180 GGNSLTDIPDT--FGDLYQLEALILSDNQLESLP---ASISNLKML-------------- 220
            GN +  + ++     L  L+ + LSDN+    P     ISNLK L              
Sbjct: 568 CGNGMVSVEESTELHHLKSLQEMHLSDNKFPHFPNELCVISNLKTLHFDQKFGCKVRLLP 627

Query: 221 ---------KSLLLHNNKLRTLPTEIITLK-------------------CLSEKLKSLLL 252
                    + L + NN L TLP  I  L                    C+ + L SL L
Sbjct: 628 ECIAELVNLEELYVDNNALETLPVMIGALAKLQKLSVCCNNITHLPESLCMLQNLTSLHL 687

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            +N+L  LP     L  +++L L  NPL+
Sbjct: 688 ESNQLMKLPVRFDNLINIADLRLEFNPLM 716



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 98/221 (44%), Gaps = 19/221 (8%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           S+KTLD S + L    L T+I         KK  N+  L L  N    FP    +  +L 
Sbjct: 515 SLKTLDVSGNDL--RELPTEI---------KKLINLKELFLNQNKFEVFPAVVCRLHSLE 563

Query: 83  SLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPK------DMSNLKNLKVFNLSGN 136
            L L  N +  + ++     L +L   +  L+    P        +SNLK L      G 
Sbjct: 564 KLHLCGNGMVSVEESTELHHLKSLQEMH--LSDNKFPHFPNELCVISNLKTLHFDQKFGC 621

Query: 137 QLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQ 196
           ++   P  I ++  L+ LY+ NN+L  +P  I  L KL  LS+  N++T +P++   L  
Sbjct: 622 KVRLLPECIAELVNLEELYVDNNALETLPVMIGALAKLQKLSVCCNNITHLPESLCMLQN 681

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
           L +L L  NQL  LP    NL  +  L L  N L   P ++
Sbjct: 682 LTSLHLESNQLMKLPVRFDNLINIADLRLEFNPLMHPPKDV 722



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/184 (28%), Positives = 87/184 (47%), Gaps = 4/184 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           E++ TL +  N+L   P    K  NL+ L L+ N+    P  +     L  L    N + 
Sbjct: 514 ESLKTLDVSGNDLRELPTEIKKLINLKELFLNQNKFEVFPAVVCRLHSLEKLHLCGNGMV 573

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN---SLNHVPREINKL 171
           +     ++ +LK+L+  +LS N+   FP ++  I  LK L+        +  +P  I +L
Sbjct: 574 SVEESTELHHLKSLQEMHLSDNKFPHFPNELCVISNLKTLHFDQKFGCKVRLLPECIAEL 633

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L +  N+L  +P   G L +L+ L +  N +  LP S+  L+ L SL L +N+L 
Sbjct: 634 VNLEELYVDNNALETLPVMIGALAKLQKLSVCCNNITHLPESLCMLQNLTSLHLESNQLM 693

Query: 232 TLPT 235
            LP 
Sbjct: 694 KLPV 697


>gi|307204168|gb|EFN83009.1| Protein lap4 [Harpegnathos saltator]
          Length = 1538

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/224 (34%), Positives = 122/224 (54%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLT 114
           +++ LLL  N++   P N  +   LR L LS+N I  LP  I NF   +   ++RN++  
Sbjct: 38  SLEELLLDANHIRDLPKNFFRLQRLRKLGLSDNEINRLPPDIQNFENLVELDVSRNDI-- 95

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+++ NL+ L+V + S N + + P   + +  L  L L + SL ++P +   L  L
Sbjct: 96  -PDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEAL 154

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P++   L++LE L L DN++E LPA +  L  L+ L L +N+L+ LP
Sbjct: 155 QSLELRENLLRSLPESLSQLFKLERLDLGDNEIEELPAHVGKLPALQELWLDHNQLQHLP 214

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK L+     L +  N+L  LP EI  L+ L++L L  N
Sbjct: 215 PEIGELKTLA----CLDVSENRLEDLPNEIGGLESLTDLHLSQN 254



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 130/284 (45%), Gaps = 51/284 (17%)

Query: 46  LPNNDYNKKP------ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQA-- 97
           L +N+ N+ P      EN+  L +  N++   P+N      L+  D S+N I  LP    
Sbjct: 67  LSDNEINRLPPDIQNFENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFV 126

Query: 98  --------------ITNFP--------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSG 135
                         +TN P        L +L  R NLL   SLP+ +S L  L+  +L  
Sbjct: 127 QLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENLL--RSLPESLSQLFKLERLDLGD 184

Query: 136 NQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLY 195
           N++E+ P  +  +P L+ L+L +N L H+P EI +L  L  L +  N L D+P+  G L 
Sbjct: 185 NEIEELPAHVGKLPALQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPNEIGGLE 244

Query: 196 QLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE---------- 245
            L  L LS N +E LP  +  LK L  L +  N+L TL   I   + L E          
Sbjct: 245 SLTDLHLSQNVIEKLPDGLGELKKLTILKVDQNRLSTLNPNIGRCENLQELILTENFLLE 304

Query: 246 ---------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
                     L +L +  N +++LP EI  LK L  LSLRDN L
Sbjct: 305 LPVSIGKLHNLNNLNVDRNSVQSLPIEIGNLKKLGVLSLRDNKL 348



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/253 (33%), Positives = 127/253 (50%), Gaps = 15/253 (5%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E + +L L  N L   P++ S+   L  LDL +N I  LP  +   P L  L   +N L 
Sbjct: 152 EALQSLELRENLLRSLPESLSQLFKLERLDLGDNEIEELPAHVGKLPALQELWLDHNQL- 210

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            + LP ++  LK L   ++S N+LE  P +I  + +L  L+L  N +  +P  + +L KL
Sbjct: 211 -QHLPPEIGELKTLACLDVSENRLEDLPNEIGGLESLTDLHLSQNVIEKLPDGLGELKKL 269

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L +  N L+ +    G    L+ LIL++N L  LP SI  L  L +L +  N +++LP
Sbjct: 270 TILKVDQNRLSTLNPNIGRCENLQELILTENFLLELPVSIGKLHNLNNLNVDRNSVQSLP 329

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPS 294
            EI  LK    KL  L L +NKL+ LPTE+     L  L +  N L         Y P S
Sbjct: 330 IEIGNLK----KLGVLSLRDNKLQYLPTEVGQCSALHVLDVSGNRL--------QYLPYS 377

Query: 295 LLELASRTLKVHE 307
           L+ L+ + + + E
Sbjct: 378 LINLSLKAVWLSE 390



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 67/209 (32%), Positives = 99/209 (47%), Gaps = 16/209 (7%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LPK+   L+ L+   LS N++ + P  I +   L  L +  N +  +P  I  L  L V 
Sbjct: 52  LPKNFFRLQRLRKLGLSDNEINRLPPDIQNFENLVELDVSRNDIPDIPENIKNLRALQVA 111

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
               N +  +P  F  L  L  L L+D  L +LP    +L+ L+SL L  N LR+LP  +
Sbjct: 112 DFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENLLRSLPESL 171

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLE 297
             L     KL+ L L +N++  LP  +  L  L EL L  N L         + PP + E
Sbjct: 172 SQLF----KLERLDLGDNEIEELPAHVGKLPALQELWLDHNQL--------QHLPPEIGE 219

Query: 298 LASRTLKVHEIDYSQ-EHLPQNLVQYLES 325
           L  +TL   ++  ++ E LP N +  LES
Sbjct: 220 L--KTLACLDVSENRLEDLP-NEIGGLES 245



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 66/216 (30%), Positives = 95/216 (43%), Gaps = 29/216 (13%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           +IE LP +   K P  +  L L HN L   P    +   L  LD+S NR+  LP  I   
Sbjct: 186 EIEELPAH-VGKLPA-LQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPNEIGGL 243

Query: 102 P-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE--------------------- 139
             L+ L    N++  E LP  +  LK L +  +  N+L                      
Sbjct: 244 ESLTDLHLSQNVI--EKLPDGLGELKKLTILKVDQNRLSTLNPNIGRCENLQELILTENF 301

Query: 140 --QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
             + P+ I  +  L  L +  NS+  +P EI  L KL VLSL  N L  +P   G    L
Sbjct: 302 LLELPVSIGKLHNLNNLNVDRNSVQSLPIEIGNLKKLGVLSLRDNKLQYLPTEVGQCSAL 361

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
             L +S N+L+ LP S+ NL  LK++ L  N+ + +
Sbjct: 362 HVLDVSGNRLQYLPYSLINLS-LKAVWLSENQAQPM 396



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/192 (30%), Positives = 89/192 (46%), Gaps = 15/192 (7%)

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           ++L+   L  N +   P     +  L+ L L +N +N +P +I     L  L +  N + 
Sbjct: 37  RSLEELLLDANHIRDLPKNFFRLQRLRKLGLSDNEINRLPPDIQNFENLVELDVSRNDIP 96

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           DIP+   +L  L+    S N +  LPA    L+ L  L L++  L  LP +  +L    E
Sbjct: 97  DIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSL----E 152

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKV 305
            L+SL L  N LR+LP  +  L  L  L L DN   I  +     K P+L EL       
Sbjct: 153 ALQSLELRENLLRSLPESLSQLFKLERLDLGDNE--IEELPAHVGKLPALQELW------ 204

Query: 306 HEIDYSQ-EHLP 316
             +D++Q +HLP
Sbjct: 205 --LDHNQLQHLP 214


>gi|427706829|ref|YP_007049206.1| small GTP-binding protein [Nostoc sp. PCC 7107]
 gi|427359334|gb|AFY42056.1| small GTP-binding protein [Nostoc sp. PCC 7107]
          Length = 925

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 120/212 (56%), Gaps = 5/212 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           N+  L L +N +S  P+  ++ TNLR L LSNN+++ +P+ I       L++ NN   +E
Sbjct: 63  NLIQLNLSYNQISEIPEAITQLTNLRLLSLSNNQVSEIPEEIAQLTNLRLLSLNNNQISE 122

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            +P++++ L NL   +L  NQ+ + P  I  +  L+ LYL NN ++ +P EI +L  L +
Sbjct: 123 -IPEEIAQLTNLTQLDLYNNQITEIPEAIAQLTNLRELYLSNNQISEIPEEIAQLTNLRL 181

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N +T+IP+    L  L  L LSDNQ+  +P +I+ L  L+ L L  N++  +P  
Sbjct: 182 LYLSDNQITEIPEAITQLTNLTDLYLSDNQITEIPEAITQLTNLRQLDLGGNQITEIPEA 241

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLK 268
           ++ L      L+ L L NN++  +P EI+  K
Sbjct: 242 LVKLT----NLRQLDLSNNQITEIPLEILDSK 269



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 95/169 (56%), Gaps = 3/169 (1%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           +S  P+  ++ TNL  LDL NN+IT +P+AI     L  L   NN ++   +P++++ L 
Sbjct: 120 ISEIPEEIAQLTNLTQLDLYNNQITEIPEAIAQLTNLRELYLSNNQIS--EIPEEIAQLT 177

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL++  LS NQ+ + P  I  +  L  LYL +N +  +P  I +L  L  L LGGN +T+
Sbjct: 178 NLRLLYLSDNQITEIPEAITQLTNLTDLYLSDNQITEIPEAITQLTNLRQLDLGGNQITE 237

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           IP+    L  L  L LS+NQ+  +P  I + K  K +L +  ++RT  T
Sbjct: 238 IPEALVKLTNLRQLDLSNNQITEIPLEILDSKETKKILNYLRQIRTSKT 286



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/214 (35%), Positives = 118/214 (55%), Gaps = 9/214 (4%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           L+     A+K    R LDLS N++T +P+AI     L+ L   NN +T   +P+ ++NL 
Sbjct: 7   LALIEQAAAK--GWRELDLSGNKLTKIPEAIAKLTNLTGLYLHNNKIT--EIPQVIANLT 62

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL   NLS NQ+ + P  I  +  L+ L L NN ++ +P EI +L  L +LSL  N +++
Sbjct: 63  NLIQLNLSYNQISEIPEAITQLTNLRLLSLSNNQVSEIPEEIAQLTNLRLLSLNNNQISE 122

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           IP+    L  L  L L +NQ+  +P +I+ L  L+ L L NN++  +P EI  L      
Sbjct: 123 IPEEIAQLTNLTQLDLYNNQITEIPEAIAQLTNLRELYLSNNQISEIPEEIAQLT----N 178

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L+ L L +N++  +P  I  L  L++L L DN +
Sbjct: 179 LRLLYLSDNQITEIPEAITQLTNLTDLYLSDNQI 212


>gi|443652792|ref|ZP_21130908.1| small GTP-binding domain protein [Microcystis aeruginosa
           DIANCHI905]
 gi|443334234|gb|ELS48757.1| small GTP-binding domain protein [Microcystis aeruginosa
           DIANCHI905]
          Length = 875

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 71/228 (31%), Positives = 128/228 (56%), Gaps = 7/228 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K E  + L L   NL+  P      T+L+ L+LSNN+I+ +P+A+     L  L  +NN 
Sbjct: 14  KDERAEKLDLSGRNLTEIPPEIPHLTSLQELNLSNNQISEIPEALAQLTSLQRLYLKNNQ 73

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           +    +P+ +++L +L+V  L+ NQ+ + P  +  + +L+ L L +N +  +P+ +  L 
Sbjct: 74  I--REIPEALTHLTSLQVLYLNNNQISEIPEALAQLTSLQRLDLSDNQIREIPKALAHLT 131

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N + +IP+    L  LE L L++NQ++ +P ++++L  L+ L L NN++R 
Sbjct: 132 SLQELDLSDNQIREIPEALAHLTSLELLFLNNNQIKEIPEALAHLTSLQVLYLSNNQIRE 191

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +P  +  L      L++L L NN++R +P  +  L  L  L L++NP+
Sbjct: 192 IPEALAQLTS----LQNLHLKNNQIREIPEALAHLVNLKRLVLQNNPI 235



 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 116/204 (56%), Gaps = 7/204 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L +N +S  P+  ++ T+L+ L L NN+I  +P+A+T+   L  L   NN ++   +P+ 
Sbjct: 46  LSNNQISEIPEALAQLTSLQRLYLKNNQIREIPEALTHLTSLQVLYLNNNQIS--EIPEA 103

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           ++ L +L+  +LS NQ+ + P  +  + +L+ L L +N +  +P  +  L  L +L L  
Sbjct: 104 LAQLTSLQRLDLSDNQIREIPKALAHLTSLQELDLSDNQIREIPEALAHLTSLELLFLNN 163

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N + +IP+    L  L+ L LS+NQ+  +P +++ L  L++L L NN++R +P  +  L 
Sbjct: 164 NQIKEIPEALAHLTSLQVLYLSNNQIREIPEALAQLTSLQNLHLKNNQIREIPEALAHLV 223

Query: 242 CLSEKLKSLLLHNNKLRTLPTEII 265
                LK L+L NN +  +P EII
Sbjct: 224 ----NLKRLVLQNNPITNVPPEII 243



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/200 (31%), Positives = 111/200 (55%), Gaps = 9/200 (4%)

Query: 46  LPNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN  ++ PE      ++  L L +N +   P+  +  T+L+ L L+NN+I+ +P+A+ 
Sbjct: 46  LSNNQISEIPEALAQLTSLQRLYLKNNQIREIPEALTHLTSLQVLYLNNNQISEIPEALA 105

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L  L   +N +    +PK +++L +L+  +LS NQ+ + P  +  + +L+ L+L N
Sbjct: 106 QLTSLQRLDLSDNQI--REIPKALAHLTSLQELDLSDNQIREIPEALAHLTSLELLFLNN 163

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N +  +P  +  L  L VL L  N + +IP+    L  L+ L L +NQ+  +P ++++L 
Sbjct: 164 NQIKEIPEALAHLTSLQVLYLSNNQIREIPEALAQLTSLQNLHLKNNQIREIPEALAHLV 223

Query: 219 MLKSLLLHNNKLRTLPTEII 238
            LK L+L NN +  +P EII
Sbjct: 224 NLKRLVLQNNPITNVPPEII 243



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 108/199 (54%), Gaps = 6/199 (3%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            +P ++ +L +L+  NLS NQ+ + P  +  + +L+ LYL NN +  +P  +  L  L V
Sbjct: 30  EIPPEIPHLTSLQELNLSNNQISEIPEALAQLTSLQRLYLKNNQIREIPEALTHLTSLQV 89

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N +++IP+    L  L+ L LSDNQ+  +P ++++L  L+ L L +N++R +P  
Sbjct: 90  LYLNNNQISEIPEALAQLTSLQRLDLSDNQIREIPKALAHLTSLQELDLSDNQIREIPEA 149

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
           +  L      L+ L L+NN+++ +P  +  L  L  L L +N   IR + +   +  SL 
Sbjct: 150 LAHLTS----LELLFLNNNQIKEIPEALAHLTSLQVLYLSNNQ--IREIPEALAQLTSLQ 203

Query: 297 ELASRTLKVHEIDYSQEHL 315
            L  +  ++ EI  +  HL
Sbjct: 204 NLHLKNNQIREIPEALAHL 222



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 54/190 (28%), Positives = 103/190 (54%), Gaps = 9/190 (4%)

Query: 46  LPNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN   + PE      ++  L L +N +S  P+  ++ T+L+ LDLS+N+I  +P+A+ 
Sbjct: 69  LKNNQIREIPEALTHLTSLQVLYLNNNQISEIPEALAQLTSLQRLDLSDNQIREIPKALA 128

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
           +   L  L   +N +    +P+ +++L +L++  L+ NQ+++ P  +  + +L+ LYL N
Sbjct: 129 HLTSLQELDLSDNQI--REIPEALAHLTSLELLFLNNNQIKEIPEALAHLTSLQVLYLSN 186

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N +  +P  + +L  L  L L  N + +IP+    L  L+ L+L +N + ++P  I    
Sbjct: 187 NQIREIPEALAQLTSLQNLHLKNNQIREIPEALAHLVNLKRLVLQNNPITNVPPEIIRQG 246

Query: 219 MLKSLLLHNN 228
             K++L   N
Sbjct: 247 WGKTILDDGN 256


>gi|440909593|gb|ELR59482.1| Leucine-rich repeat-containing protein 1, partial [Bos grunniens
           mutus]
          Length = 516

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 117/209 (55%), Gaps = 7/209 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 144 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS- 202

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 203 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKKLS 261

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+  GD   L  L+L++N+L +LP SI  LK L +L    NKL +LP 
Sbjct: 262 ILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPK 321

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           EI    C S  L    + +N+L  +P E+
Sbjct: 322 EIG--GCCS--LTVFCVRDNRLTRIPAEV 346



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/235 (35%), Positives = 121/235 (51%), Gaps = 10/235 (4%)

Query: 46  LPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLS 104
           +P+  Y +   +++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L 
Sbjct: 19  VPDEVY-RYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLV 77

Query: 105 TL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNH 163
            L ++RN++     +P+ +S  K L++ + SGN L + P    ++  L  L + + SL  
Sbjct: 78  ELDVSRNDI---PEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQS 134

Query: 164 VPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL 223
           +P  I  L  L  L L  N LT +PD+   L +LE L L +N++ +LP SI  L  LK L
Sbjct: 135 LPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDL 194

Query: 224 LLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L  N+L  LP EI  LK     L  L +  N+L  LP EI  L  L++L +  N
Sbjct: 195 WLDGNQLSELPQEIGNLK----NLLCLDVSENRLERLPEEISGLTSLTDLVISQN 245



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 125/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N++   P++ S    L+  D S N +T LP++  
Sbjct: 58  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 117

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 118 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 176

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 177 EIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 236

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTL 260
           L  L++  N L  LP  I  LK LS                   E L  L+L  N+L TL
Sbjct: 237 LTDLVISQNLLEMLPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTL 296

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK LS L+   N LV
Sbjct: 297 PKSIGKLKKLSNLNADRNKLV 317



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 83/163 (50%), Gaps = 4/163 (2%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LP+    L  L+   LS N++++ P +I +   L  L +  N +  +P  I+    L + 
Sbjct: 43  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIA 102

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
              GN LT +P++F +L  L  L ++D  L+SLP +I NL  L SL L  N L  LP  +
Sbjct: 103 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 162

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             L+    +L+ L L NN++  LP  I  L  L +L L  N L
Sbjct: 163 TQLR----RLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQL 201


>gi|329664482|ref|NP_001192398.1| leucine-rich repeat-containing protein 1 [Bos taurus]
 gi|296474603|tpg|DAA16718.1| TPA: PDZ-domain protein scribble-like [Bos taurus]
          Length = 524

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 117/209 (55%), Gaps = 7/209 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 211 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKKLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+  GD   L  L+L++N+L +LP SI  LK L +L    NKL +LP 
Sbjct: 270 ILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPK 329

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           EI    C S  L    + +N+L  +P E+
Sbjct: 330 EIG--GCCS--LTVFCVRDNRLTRIPAEV 354



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 83/235 (35%), Positives = 121/235 (51%), Gaps = 10/235 (4%)

Query: 46  LPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLS 104
           +P+  Y +   +++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L 
Sbjct: 27  VPDEVY-RYARSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLV 85

Query: 105 TL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNH 163
            L ++RN++     +P+ +S  K L++ + SGN L + P    ++  L  L + + SL  
Sbjct: 86  ELDVSRNDI---PEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQS 142

Query: 164 VPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL 223
           +P  I  L  L  L L  N LT +PD+   L +LE L L +N++ +LP SI  L  LK L
Sbjct: 143 LPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDL 202

Query: 224 LLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L  N+L  LP EI  LK     L  L +  N+L  LP EI  L  L++L +  N
Sbjct: 203 WLDGNQLSELPQEIGNLK----NLLCLDVSENRLERLPEEISGLTSLTDLVISQN 253



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 125/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N++   P++ S    L+  D S N +T LP++  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 126 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 185 EIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 244

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTL 260
           L  L++  N L  LP  I  LK LS                   E L  L+L  N+L TL
Sbjct: 245 LTDLVISQNLLEMLPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTL 304

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK LS L+   N LV
Sbjct: 305 PKSIGKLKKLSNLNADRNKLV 325



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/163 (33%), Positives = 83/163 (50%), Gaps = 4/163 (2%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LP+    L  L+   LS N++++ P +I +   L  L +  N +  +P  I+    L + 
Sbjct: 51  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIA 110

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
              GN LT +P++F +L  L  L ++D  L+SLP +I NL  L SL L  N L  LP  +
Sbjct: 111 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 170

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             L+    +L+ L L NN++  LP  I  L  L +L L  N L
Sbjct: 171 TQLR----RLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQL 209


>gi|456969346|gb|EMG10380.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 598

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 124/249 (49%), Gaps = 24/249 (9%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLL 113
           +N+  L L  N L+  P    +  NL+ LDL +N++   P  I     L +L ++ N L+
Sbjct: 71  KNLQELNLKWNLLTTLPKEIGQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLI 130

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L+NL+   L  N+L  FP +I  +  L+ L+L  N L  +P+EI +L  
Sbjct: 131 I---LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKN 187

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N  T +P   G L  L+ L LSDNQL +LP  I  L+ L+ L L NN+L   
Sbjct: 188 LQTLDLQDNQFTILPKEIGQLQNLQTLNLSDNQLATLPVEIGQLQNLQKLYLRNNRLTVF 247

Query: 234 PTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           P EI  L+ L                    + L++L L NN+L   P EI  L+ L +L 
Sbjct: 248 PKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLE 307

Query: 275 LRDNPLVIR 283
           L  NPL ++
Sbjct: 308 LLMNPLSLK 316



 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/213 (38%), Positives = 117/213 (54%), Gaps = 5/213 (2%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKV 130
           FP    KF NLR L+L +   + LP+ I+       +A   L   +++P ++  LKNL+ 
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALG-LNGLKNIPSEIGQLKNLEA 426

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NL  N+LE+ P +I  +  L+ L L  N+L   P EI +L KL  L L  N  T  P  
Sbjct: 427 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKE 486

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
            G L  L+ L L  NQL +L A I  L+ L+ L L++N+   LP EI  LK    KL++L
Sbjct: 487 IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLK----KLQTL 542

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
            L NN+L TLPTEI  L+ L  L L++N L ++
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLK 575



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 112/221 (50%), Gaps = 11/221 (4%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N+  L LY    S  P   S+  NL+ L L  N + ++P  I     L  L    N 
Sbjct: 374 KFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE 433

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L  E LPK++  L+NL+  +L  N L+ FP +I  +  L+ L L  N     P+EI KL 
Sbjct: 434 L--ERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLE 491

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L+L  N LT++    G L  L+ L L+DNQ   LP  I  LK L++L L NN+L T
Sbjct: 492 NLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTT 551

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTE----IITLKC 269
           LPTEI  L    + L+ L L NN+L     E    ++ LKC
Sbjct: 552 LPTEIGQL----QNLQWLYLQNNQLSLKEQERIRKLLPLKC 588



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 116/261 (44%), Gaps = 44/261 (16%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNN--------RITHLPQAITNFPLSTL- 106
           +N+ TL L +N L+ FP    +  NL+ L+L  N        RI  L      FP S L 
Sbjct: 278 QNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPLSLKERKRIQKL------FPDSNLD 331

Query: 107 ---IARNNLLT----------------------AESLPKDMSNLKNLKVFNLSGNQLEQF 141
              +A N +                        ++S PK +   +NL+  NL        
Sbjct: 332 LREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTL 391

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P +I  +  LKYL LG N L ++P EI +L  L  L+L  N L  +P   G L  L+ L 
Sbjct: 392 PKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLS 451

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           L  N L+  PA I  LK L+ L L  N+  T P EI  L    E L++L L  N+L  L 
Sbjct: 452 LHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKL----ENLQTLNLQRNQLTNLT 507

Query: 262 TEIITLKCLSELSLRDNPLVI 282
            EI  L+ L EL L DN   +
Sbjct: 508 AEIGQLQNLQELDLNDNQFTV 528



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 68/169 (40%), Positives = 90/169 (53%), Gaps = 4/169 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  N++V NLSG +L   P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 36  TYMDLTKALQNPLNVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTTLPKEIGQLEN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L   P    +L +LE+L LS+N+L  LP  I  L+ L+ L L+ NKL T 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  L    + L+ L L  N+L  LP EI  LK L  L L+DN   I
Sbjct: 156 PKEIGQL----QNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTI 200


>gi|340713138|ref|XP_003395105.1| PREDICTED: protein lap4-like isoform 1 [Bombus terrestris]
 gi|340713140|ref|XP_003395106.1| PREDICTED: protein lap4-like isoform 2 [Bombus terrestris]
 gi|340713144|ref|XP_003395108.1| PREDICTED: protein lap4-like isoform 4 [Bombus terrestris]
          Length = 1599

 Score =  112 bits (281), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 121/224 (54%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLT 114
           +++ LLL  N++   P N  +   LR L LS+N I  LP  I NF   +   ++RN++  
Sbjct: 38  SLEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDI-- 95

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+++ NL+ L+V + S N + + P   + +  L  L L + SL ++P +   L  L
Sbjct: 96  -PDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEAL 154

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P++   LY+LE L L DN +E LPA I  L  L+ L L +N+L+ LP
Sbjct: 155 QSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQHLP 214

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK L+     L +  N+L  LP EI  L+ L++L L  N
Sbjct: 215 PEIGELKTLA----CLDVSENRLEDLPEEIGGLESLTDLHLSQN 254



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 124/268 (46%), Gaps = 45/268 (16%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQA----------------IT 99
           EN+  L +  N++   P+N      L+  D S+N I  LP                  +T
Sbjct: 83  ENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLT 142

Query: 100 NFP--------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
           N P        L +L  R NLL  +SLP+ +S L  L+  +L  N +E  P  I  +P L
Sbjct: 143 NLPPDFGSLEALQSLELRENLL--KSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPAL 200

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           + L+L +N L H+P EI +L  L  L +  N L D+P+  G L  L  L LS N +E LP
Sbjct: 201 QELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLP 260

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE-------------------KLKSLLL 252
             +  L+ L  L +  N+L TL + I   + L E                    L +L +
Sbjct: 261 DGLGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFLLELPVTIGKLHNLNNLNV 320

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDNPL 280
             N L++LPTEI  LK L  LSLRDN L
Sbjct: 321 DRNSLQSLPTEIGNLKQLGVLSLRDNKL 348



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 116/226 (51%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E + +L L  N L   P++ S+   L  LDL +N I  LP  I   P L  L   +N L 
Sbjct: 152 EALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQL- 210

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            + LP ++  LK L   ++S N+LE  P +I  + +L  L+L  N +  +P  + +L KL
Sbjct: 211 -QHLPPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELQKL 269

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L +  N L+ +    G    L+ LIL++N L  LP +I  L  L +L +  N L++LP
Sbjct: 270 TILKVDQNRLSTLNSNIGRCENLQELILTENFLLELPVTIGKLHNLNNLNVDRNSLQSLP 329

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           TEI  LK    +L  L L +NKL+ LP E+     L  L +  N L
Sbjct: 330 TEIGNLK----QLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRL 371



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 96/215 (44%), Gaps = 29/215 (13%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP 102
           IE+LP +   K P  +  L L HN L   P    +   L  LD+S NR+  LP+ I    
Sbjct: 187 IEVLPAH-IGKLPA-LQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEIGGLE 244

Query: 103 -LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE---------------------- 139
            L+ L    N++  E LP  +  L+ L +  +  N+L                       
Sbjct: 245 SLTDLHLSQNVI--EKLPDGLGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFL 302

Query: 140 -QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
            + P+ I  +  L  L +  NSL  +P EI  L +L VLSL  N L  +P   G    L 
Sbjct: 303 LELPVTIGKLHNLNNLNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEVGQCTALH 362

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
            L +S N+L+ LP S+ NL  LK++ L  N+ + +
Sbjct: 363 VLDVSGNRLQYLPYSLINLN-LKAVWLSKNQAQPM 396



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 15/192 (7%)

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           ++L+   L  N +   P     +  L+ L L +N ++ +P +I     L  L +  N + 
Sbjct: 37  RSLEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIP 96

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           DIP+   +L  L+    S N +  LPA    L+ L  L L++  L  LP +  +L    E
Sbjct: 97  DIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSL----E 152

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKV 305
            L+SL L  N L++LP  +  L  L  L L DN   I  +     K P+L EL       
Sbjct: 153 ALQSLELRENLLKSLPESLSQLYKLERLDLGDND--IEVLPAHIGKLPALQELW------ 204

Query: 306 HEIDYSQ-EHLP 316
             +D++Q +HLP
Sbjct: 205 --LDHNQLQHLP 214


>gi|350417077|ref|XP_003491245.1| PREDICTED: protein lap4-like isoform 3 [Bombus impatiens]
          Length = 1835

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 121/224 (54%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLT 114
           +++ LLL  N++   P N  +   LR L LS+N I  LP  I NF   +   ++RN++  
Sbjct: 38  SLEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDI-- 95

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+++ NL+ L+V + S N + + P   + +  L  L L + SL ++P +   L  L
Sbjct: 96  -PDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEAL 154

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P++   LY+LE L L DN +E LPA I  L  L+ L L +N+L+ LP
Sbjct: 155 QSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQHLP 214

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK L+     L +  N+L  LP EI  L+ L++L L  N
Sbjct: 215 PEIGELKTLA----CLDVSENRLEDLPEEIGGLESLTDLHLSQN 254



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 124/268 (46%), Gaps = 45/268 (16%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQA----------------IT 99
           EN+  L +  N++   P+N      L+  D S+N I  LP                  +T
Sbjct: 83  ENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLT 142

Query: 100 NFP--------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
           N P        L +L  R NLL  +SLP+ +S L  L+  +L  N +E  P  I  +P L
Sbjct: 143 NLPPDFGSLEALQSLELRENLL--KSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPAL 200

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           + L+L +N L H+P EI +L  L  L +  N L D+P+  G L  L  L LS N +E LP
Sbjct: 201 QELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLP 260

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE-------------------KLKSLLL 252
             +  L+ L  L +  N+L TL + I   + L E                    L +L +
Sbjct: 261 DGLGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFLLELPVTIGKLHNLNNLNV 320

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDNPL 280
             N L++LPTEI  LK L  LSLRDN L
Sbjct: 321 DRNSLQSLPTEIGNLKQLGVLSLRDNKL 348



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 116/226 (51%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E + +L L  N L   P++ S+   L  LDL +N I  LP  I   P L  L   +N L 
Sbjct: 152 EALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQL- 210

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            + LP ++  LK L   ++S N+LE  P +I  + +L  L+L  N +  +P  + +L KL
Sbjct: 211 -QHLPPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELQKL 269

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L +  N L+ +    G    L+ LIL++N L  LP +I  L  L +L +  N L++LP
Sbjct: 270 TILKVDQNRLSTLNSNIGRCENLQELILTENFLLELPVTIGKLHNLNNLNVDRNSLQSLP 329

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           TEI  LK    +L  L L +NKL+ LP E+     L  L +  N L
Sbjct: 330 TEIGNLK----QLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRL 371



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 96/215 (44%), Gaps = 29/215 (13%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP 102
           IE+LP +   K P  +  L L HN L   P    +   L  LD+S NR+  LP+ I    
Sbjct: 187 IEVLPAH-IGKLPA-LQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEIGGLE 244

Query: 103 -LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE---------------------- 139
            L+ L    N++  E LP  +  L+ L +  +  N+L                       
Sbjct: 245 SLTDLHLSQNVI--EKLPDGLGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFL 302

Query: 140 -QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
            + P+ I  +  L  L +  NSL  +P EI  L +L VLSL  N L  +P   G    L 
Sbjct: 303 LELPVTIGKLHNLNNLNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEVGQCTALH 362

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
            L +S N+L+ LP S+ NL  LK++ L  N+ + +
Sbjct: 363 VLDVSGNRLQYLPYSLINLN-LKAVWLSKNQAQPM 396



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 15/192 (7%)

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           ++L+   L  N +   P     +  L+ L L +N ++ +P +I     L  L +  N + 
Sbjct: 37  RSLEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIP 96

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           DIP+   +L  L+    S N +  LPA    L+ L  L L++  L  LP +  +L    E
Sbjct: 97  DIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSL----E 152

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKV 305
            L+SL L  N L++LP  +  L  L  L L DN   I  +     K P+L EL       
Sbjct: 153 ALQSLELRENLLKSLPESLSQLYKLERLDLGDND--IEVLPAHIGKLPALQELW------ 204

Query: 306 HEIDYSQ-EHLP 316
             +D++Q +HLP
Sbjct: 205 --LDHNQLQHLP 214


>gi|340713142|ref|XP_003395107.1| PREDICTED: protein lap4-like isoform 3 [Bombus terrestris]
          Length = 2051

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 121/224 (54%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLT 114
           +++ LLL  N++   P N  +   LR L LS+N I  LP  I NF   +   ++RN++  
Sbjct: 38  SLEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDI-- 95

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+++ NL+ L+V + S N + + P   + +  L  L L + SL ++P +   L  L
Sbjct: 96  -PDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEAL 154

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P++   LY+LE L L DN +E LPA I  L  L+ L L +N+L+ LP
Sbjct: 155 QSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQHLP 214

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK L+     L +  N+L  LP EI  L+ L++L L  N
Sbjct: 215 PEIGELKTLA----CLDVSENRLEDLPEEIGGLESLTDLHLSQN 254



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 124/268 (46%), Gaps = 45/268 (16%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQA----------------IT 99
           EN+  L +  N++   P+N      L+  D S+N I  LP                  +T
Sbjct: 83  ENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLT 142

Query: 100 NFP--------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
           N P        L +L  R NLL  +SLP+ +S L  L+  +L  N +E  P  I  +P L
Sbjct: 143 NLPPDFGSLEALQSLELRENLL--KSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPAL 200

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           + L+L +N L H+P EI +L  L  L +  N L D+P+  G L  L  L LS N +E LP
Sbjct: 201 QELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLP 260

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE-------------------KLKSLLL 252
             +  L+ L  L +  N+L TL + I   + L E                    L +L +
Sbjct: 261 DGLGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFLLELPVTIGKLHNLNNLNV 320

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDNPL 280
             N L++LPTEI  LK L  LSLRDN L
Sbjct: 321 DRNSLQSLPTEIGNLKQLGVLSLRDNKL 348



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 116/226 (51%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E + +L L  N L   P++ S+   L  LDL +N I  LP  I   P L  L   +N L 
Sbjct: 152 EALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQL- 210

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            + LP ++  LK L   ++S N+LE  P +I  + +L  L+L  N +  +P  + +L KL
Sbjct: 211 -QHLPPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELQKL 269

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L +  N L+ +    G    L+ LIL++N L  LP +I  L  L +L +  N L++LP
Sbjct: 270 TILKVDQNRLSTLNSNIGRCENLQELILTENFLLELPVTIGKLHNLNNLNVDRNSLQSLP 329

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           TEI  LK    +L  L L +NKL+ LP E+     L  L +  N L
Sbjct: 330 TEIGNLK----QLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRL 371



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 96/215 (44%), Gaps = 29/215 (13%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP 102
           IE+LP +   K P  +  L L HN L   P    +   L  LD+S NR+  LP+ I    
Sbjct: 187 IEVLPAH-IGKLPA-LQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEIGGLE 244

Query: 103 -LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE---------------------- 139
            L+ L    N++  E LP  +  L+ L +  +  N+L                       
Sbjct: 245 SLTDLHLSQNVI--EKLPDGLGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFL 302

Query: 140 -QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
            + P+ I  +  L  L +  NSL  +P EI  L +L VLSL  N L  +P   G    L 
Sbjct: 303 LELPVTIGKLHNLNNLNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEVGQCTALH 362

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
            L +S N+L+ LP S+ NL  LK++ L  N+ + +
Sbjct: 363 VLDVSGNRLQYLPYSLINLN-LKAVWLSKNQAQPM 396



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 15/192 (7%)

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           ++L+   L  N +   P     +  L+ L L +N ++ +P +I     L  L +  N + 
Sbjct: 37  RSLEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIP 96

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           DIP+   +L  L+    S N +  LPA    L+ L  L L++  L  LP +  +L    E
Sbjct: 97  DIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSL----E 152

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKV 305
            L+SL L  N L++LP  +  L  L  L L DN   I  +     K P+L EL       
Sbjct: 153 ALQSLELRENLLKSLPESLSQLYKLERLDLGDND--IEVLPAHIGKLPALQELW------ 204

Query: 306 HEIDYSQ-EHLP 316
             +D++Q +HLP
Sbjct: 205 --LDHNQLQHLP 214


>gi|418709144|ref|ZP_13269938.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410770480|gb|EKR45699.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|456970649|gb|EMG11403.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 407

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 84/198 (42%), Positives = 108/198 (54%), Gaps = 10/198 (5%)

Query: 69  SFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKN 127
           +  P   ++  NL+ L L  NR+T LP+ I     L  L    N LT   LPK++  LKN
Sbjct: 204 TILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTI--LPKEIGQLKN 261

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           L V +LSGNQL   P +I  +  L+ L L  N     P+EI +   L VL L  N LT +
Sbjct: 262 LLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTTL 321

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
           P+  G L  L+ L LS NQL +LP  I  L+ L+SL L +N+L TLP EI  LK     L
Sbjct: 322 PEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLK----NL 377

Query: 248 KSLLLHNNKLRTLPTEII 265
           K L LHNN   +LP+E I
Sbjct: 378 KKLYLHNN---SLPSEKI 392



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 89/249 (35%), Positives = 128/249 (51%), Gaps = 24/249 (9%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP---LSTLIARN 110
           K +N+  L L+ N L+  P    +  NL+ L LS NR+T LP+ I         +L  +N
Sbjct: 141 KLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKN 200

Query: 111 NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
              T   LPK+++ L+NL+  +L  N+L   P +I  +  L+ L L  N L  +P+EI +
Sbjct: 201 KPFTI--LPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQ 258

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L VL L GN LT +P     L  L+ L L  N+ E+ P  I+  + L+ L L+ N+L
Sbjct: 259 LKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRL 318

Query: 231 RTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLS 271
            TLP EI  L+ L                    +KL+SL L +N+L TLP EI  LK L 
Sbjct: 319 TTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLK 378

Query: 272 ELSLRDNPL 280
           +L L +N L
Sbjct: 379 KLYLHNNSL 387



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 98/279 (35%), Positives = 139/279 (49%), Gaps = 21/279 (7%)

Query: 4   NYGSSSSSDSSDSDSFKTV-SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLL 62
           NY +     ++ +++ K    ++ LD S S L  + L  +I  L         +N+  L 
Sbjct: 32  NYTTKEGLYTNLTEALKNPNEVRILDLSRSKL--KILPKEIGQL---------QNLQILN 80

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
             +N L+  P    K  NL+ L L NN++T LP+ I     L  L   NN LT  +LP++
Sbjct: 81  SENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLT--TLPEE 138

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L+NL+  NL  N+L   P +I  +  L+ LYL  N L  +P EI +L  L  LSLGG
Sbjct: 139 IGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGG 198

Query: 182 NS--LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
            +   T +P     L  L+ L L  N+L  LP  I  L+ L+ L L+ N+L  LP EI  
Sbjct: 199 KNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQ 258

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           LK L      L L  N+L  LP EI  L+ L EL+L  N
Sbjct: 259 LKNLL----VLDLSGNQLTILPKEITQLQNLQELNLEYN 293



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 87/233 (37%), Positives = 120/233 (51%), Gaps = 9/233 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K P  +  L L  + L   P    +  NL+ L+  NN++T LP+ I     L  L  +NN
Sbjct: 48  KNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNN 107

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  +LP+++  L+NLKV +L+ NQL   P +I  +  L+ L L  N LN +P+EI +L
Sbjct: 108 QLT--TLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRL 165

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILS--DNQLESLPASISNLKMLKSLLLHNNK 229
             L  L L  N LT +P+  G L  L  L L   +     LP  I+ L+ L+ L L  N+
Sbjct: 166 QNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNR 225

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           L  LP EI  L    + L+ L L+ N+L  LP EI  LK L  L L  N L I
Sbjct: 226 LTVLPKEIGQL----QNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTI 274


>gi|427736832|ref|YP_007056376.1| hypothetical protein Riv7116_3370 [Rivularia sp. PCC 7116]
 gi|427371873|gb|AFY55829.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 421

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 90/225 (40%), Positives = 119/225 (52%), Gaps = 5/225 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           E + TL L   +L F P    K  NL  L L NN +T LP+ I       L+  +N L  
Sbjct: 17  EGLTTLNLSGEDLHFLPKEIKKLPNLEYLYLGNNHLTELPEEIEQLKKLKLLDLSNNL-I 75

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           +S P  ++ L NLKV +L  N L   P +I ++  L+YL L NN LN +P E  KL KL 
Sbjct: 76  KSFPLGIAKLTNLKVLSLDDNYLNNLPEEIGNLNNLEYLDLSNNQLNQLPPEFGKLIKLQ 135

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L GN LT +P  FG L +L+ L L +N+L  LP     L  L+ + L NNKL TLP 
Sbjct: 136 ELCLEGNQLTSLPCEFGQLSKLKELDLLENELTYLPEEFGKLINLQKVDLGNNKLITLPK 195

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI  L      L+ L +  N+L +LP E+  L  L +L+L  N L
Sbjct: 196 EIGQLA----NLELLEIGENQLTSLPPELGKLSKLKQLNLSVNQL 236



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/270 (35%), Positives = 133/270 (49%), Gaps = 15/270 (5%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L  N L++ P+   K  NL+ +DL NN++  LP+ I     L  L    N LT  SLP +
Sbjct: 162 LLENELTYLPEEFGKLINLQKVDLGNNKLITLPKEIGQLANLELLEIGENQLT--SLPPE 219

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L  LK  NLS NQL   P+    +  LK LYL +N    +P EI++L  L  L +  
Sbjct: 220 LGKLSKLKQLNLSVNQLSDLPLSQAKLINLKTLYLCSNQFTKLPAEISRLTNLKSLYVIQ 279

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L ++    G L  LE L +S+N+L SLP  I  L  L+  +L+ N L  LP EI  L 
Sbjct: 280 NQLNNLTPEIGQLSNLELLDISENKLNSLPTEIEKLTSLRYFILNVNHLSNLPKEIGHLT 339

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASR 301
                L +L L  N+L TLPTEI  L  L  L L +N      +S++  +   L +L   
Sbjct: 340 ----NLVTLNLQENQLTTLPTEIEKLMNLEYLFLSENK-----ISNLPIEIKQLTKLKHL 390

Query: 302 TLKVHEIDYSQEHL---PQNLVQYLESAHH 328
            L  + I    E L   PQ ++    ++HH
Sbjct: 391 DLSKNPISIPPEILKEKPQKILNCYFTSHH 420



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/225 (37%), Positives = 113/225 (50%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+  L L  N L+  P+      NL  LDLSNN++  LP        L  L    N LT 
Sbjct: 87  NLKVLSLDDNYLNNLPEEIGNLNNLEYLDLSNNQLNQLPPEFGKLIKLQELCLEGNQLT- 145

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLP +   L  LK  +L  N+L   P +   +  L+ + LGNN L  +P+EI +L  L 
Sbjct: 146 -SLPCEFGQLSKLKELDLLENELTYLPEEFGKLINLQKVDLGNNKLITLPKEIGQLANLE 204

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +G N LT +P   G L +L+ L LS NQL  LP S + L  LK+L L +N+   LP 
Sbjct: 205 LLEIGENQLTSLPPELGKLSKLKQLNLSVNQLSDLPLSQAKLINLKTLYLCSNQFTKLPA 264

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI  L      LKSL +  N+L  L  EI  L  L  L + +N L
Sbjct: 265 EISRLT----NLKSLYVIQNQLNNLTPEIGQLSNLELLDISENKL 305



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/138 (32%), Positives = 72/138 (52%), Gaps = 3/138 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L +  N L+       + +NL  LD+S N++  LP  I     L   I   N L+ 
Sbjct: 271 NLKSLYVIQNQLNNLTPEIGQLSNLELLDISENKLNSLPTEIEKLTSLRYFILNVNHLS- 329

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LPK++ +L NL   NL  NQL   P +I  +  L+YL+L  N ++++P EI +L KL 
Sbjct: 330 -NLPKEIGHLTNLVTLNLQENQLTTLPTEIEKLMNLEYLFLSENKISNLPIEIKQLTKLK 388

Query: 176 VLSLGGNSLTDIPDTFGD 193
            L L  N ++  P+   +
Sbjct: 389 HLDLSKNPISIPPEILKE 406



 Score = 38.5 bits (88), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 42/146 (28%), Positives = 67/146 (45%), Gaps = 36/146 (24%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           +++ LD S + L+S  L T+IE L +  Y          +L  N+LS  P      TNL 
Sbjct: 294 NLELLDISENKLNS--LPTEIEKLTSLRY---------FILNVNHLSNLPKEIGHLTNLV 342

Query: 83  SLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
           +L+L  N++T                        +LP ++  L NL+   LS N++   P
Sbjct: 343 TLNLQENQLT------------------------TLPTEIEKLMNLEYLFLSENKISNLP 378

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREI 168
           I+I  +  LK+L L  N ++ +P EI
Sbjct: 379 IEIKQLTKLKHLDLSKNPIS-IPPEI 403


>gi|456825364|gb|EMF73760.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 266

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 120/224 (53%), Gaps = 28/224 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           ++  L+L    L+  P    +  NL+ LDL  N+                         +
Sbjct: 51  DVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQF------------------------K 86

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++PK++  LKNL++ +L  NQ +  P +I  +  L+ L L +N L  +P+EI KL  L V
Sbjct: 87  TVPKEIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQV 146

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+L  N L  +P   G L  L+ L L  N+L++LP  I  LK L++L L+ N+L TLP E
Sbjct: 147 LNLSSNQLITLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPRE 206

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L+ L+E    L L +N++ TLP EII L+ L +L+L +NP+
Sbjct: 207 IGRLQSLTE----LHLQHNQIATLPDEIIQLQNLRKLTLYENPI 246



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 4/108 (3%)

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           + +L L    LT +P     L  L+ L L  NQ +++P  I  LK L+ L L  N+ +T+
Sbjct: 52  VRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQFKTV 111

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P +I  LK     L+ L L +N+L TLP EI  L+ L  L+L  N L+
Sbjct: 112 PKKIGQLK----NLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLI 155


>gi|351706877|gb|EHB09796.1| Leucine-rich repeat-containing protein 1, partial [Heterocephalus
           glaber]
          Length = 472

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 117/209 (55%), Gaps = 7/209 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 100 NLASLELRENLLTYLPDSLTQLQRLEELDLGNNDIYNLPKSIGALLHLKDLWLDGNQLS- 158

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 159 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLS 217

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+  GD   L  L+L++N+L +LP S+  LK L +L    NKL +LP 
Sbjct: 218 ILKVDQNRLTHLPEALGDCENLTELVLTENRLLTLPKSVGKLKKLSNLNADRNKLVSLPK 277

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           EI    C S  L    + NN+L  +P E+
Sbjct: 278 EIG--GCCS--LTVFCVRNNRLTWIPAEV 302



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 127/261 (48%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N++   P++ S    L+  D S N +T LP++  
Sbjct: 14  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 73

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 74  ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLQRLEELDLGNN 132

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P+ I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 133 DIYNLPKSIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 192

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTL 260
           L  L++  N L T+P  I  LK LS                   E L  L+L  N+L TL
Sbjct: 193 LTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTHLPEALGDCENLTELVLTENRLLTL 252

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  +  LK LS L+   N LV
Sbjct: 253 PKSVGKLKKLSNLNADRNKLV 273



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 105/204 (51%), Gaps = 9/204 (4%)

Query: 77  KFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTAESLPKDMSNLKNLKVFNLS 134
           +   LR L LS+N I  LP  I NF  L  L ++RN++     +P+ +S  K L++ + S
Sbjct: 5   QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDI---PEIPESISFCKALQIADFS 61

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
           GN L + P    ++  L  L + + SL  +P  I  L  L  L L  N LT +PD+   L
Sbjct: 62  GNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQL 121

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
            +LE L L +N + +LP SI  L  LK L L  N+L  LP EI  LK     L  L +  
Sbjct: 122 QRLEELDLGNNDIYNLPKSIGALLHLKDLWLDGNQLSELPQEIGNLK----NLLCLDVSE 177

Query: 255 NKLRTLPTEIITLKCLSELSLRDN 278
           N+L  LP EI  L  L++L +  N
Sbjct: 178 NRLERLPEEISGLTSLTDLVISQN 201



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 77/249 (30%), Positives = 111/249 (44%), Gaps = 38/249 (15%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NND    P++I  LL      L  N LS  P       NL  LD+S NR+  LP+ I+
Sbjct: 129 LGNNDIYNLPKSIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS 188

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL-- 156
               L+ L+   NLL  E++P  +  LK L +  +  N+L   P  + D   L  L L  
Sbjct: 189 GLTSLTDLVISQNLL--ETIPDGIGKLKKLSILKVDQNRLTHLPEALGDCENLTELVLTE 246

Query: 157 ---------------------GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLY 195
                                  N L  +P+EI   C L V  +  N LT IP       
Sbjct: 247 NRLLTLPKSVGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFCVRNNRLTWIPAEVSQAT 306

Query: 196 QLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT-EIITLKCLSEKLKSLLLHN 254
           +L  L ++ N+L  LP S++ LK LK+L L +N+ + L T +  T +   EK+ + +L  
Sbjct: 307 ELHVLDVAGNRLSHLPLSLTTLK-LKALWLSDNQSQPLLTFQTDTDRTTGEKILTCVL-- 363

Query: 255 NKLRTLPTE 263
             L  LP+E
Sbjct: 364 --LPQLPSE 370



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 79/156 (50%), Gaps = 4/156 (2%)

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L  L+   LS N++++ P +I +   L  L +  N +  +P  I+    L +    GN L
Sbjct: 6   LVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPL 65

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T +P++F +L  L  L ++D  L+SLP +I NL  L SL L  N L  LP  +  L    
Sbjct: 66  TRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQL---- 121

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           ++L+ L L NN +  LP  I  L  L +L L  N L
Sbjct: 122 QRLEELDLGNNDIYNLPKSIGALLHLKDLWLDGNQL 157


>gi|418698057|ref|ZP_13259036.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410762761|gb|EKR28920.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 289

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 119/224 (53%), Gaps = 28/224 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           ++  L+L    L+  P    +  NL+ LDL  N+                         +
Sbjct: 75  DVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQF------------------------K 110

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++PK++  LKNL++ +L  NQ +  P +I  +  L+ L L +N L  +P+EI KL  L V
Sbjct: 111 TVPKEIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQV 170

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+L  N L   P   G L  L+ L L  N+L++LP  I  LK L++L L+ N+L TLP E
Sbjct: 171 LNLSSNQLITFPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPRE 230

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L+ L+E    L L +N++ TLP EII L+ L +L+L +NP+
Sbjct: 231 IGRLQSLTE----LHLQHNQIATLPDEIIQLQNLRKLTLYENPI 270



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 4/108 (3%)

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           + +L L    LT +P     L  L+ L L  NQ +++P  I  LK L+ L L  N+ +T+
Sbjct: 76  VRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQFKTV 135

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P +I  LK     L+ L L +N+L TLP EI  L+ L  L+L  N L+
Sbjct: 136 PKKIGQLK----NLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLI 179


>gi|350417073|ref|XP_003491243.1| PREDICTED: protein lap4-like isoform 1 [Bombus impatiens]
          Length = 2050

 Score =  112 bits (281), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 121/224 (54%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLT 114
           +++ LLL  N++   P N  +   LR L LS+N I  LP  I NF   +   ++RN++  
Sbjct: 38  SLEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDI-- 95

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+++ NL+ L+V + S N + + P   + +  L  L L + SL ++P +   L  L
Sbjct: 96  -PDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEAL 154

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P++   LY+LE L L DN +E LPA I  L  L+ L L +N+L+ LP
Sbjct: 155 QSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQLQHLP 214

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK L+     L +  N+L  LP EI  L+ L++L L  N
Sbjct: 215 PEIGELKTLA----CLDVSENRLEDLPEEIGGLESLTDLHLSQN 254



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 89/268 (33%), Positives = 124/268 (46%), Gaps = 45/268 (16%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQA----------------IT 99
           EN+  L +  N++   P+N      L+  D S+N I  LP                  +T
Sbjct: 83  ENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLT 142

Query: 100 NFP--------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
           N P        L +L  R NLL  +SLP+ +S L  L+  +L  N +E  P  I  +P L
Sbjct: 143 NLPPDFGSLEALQSLELRENLL--KSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPAL 200

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           + L+L +N L H+P EI +L  L  L +  N L D+P+  G L  L  L LS N +E LP
Sbjct: 201 QELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLP 260

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE-------------------KLKSLLL 252
             +  L+ L  L +  N+L TL + I   + L E                    L +L +
Sbjct: 261 DGLGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFLLELPVTIGKLHNLNNLNV 320

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDNPL 280
             N L++LPTEI  LK L  LSLRDN L
Sbjct: 321 DRNSLQSLPTEIGNLKQLGVLSLRDNKL 348



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 116/226 (51%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E + +L L  N L   P++ S+   L  LDL +N I  LP  I   P L  L   +N L 
Sbjct: 152 EALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGKLPALQELWLDHNQL- 210

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            + LP ++  LK L   ++S N+LE  P +I  + +L  L+L  N +  +P  + +L KL
Sbjct: 211 -QHLPPEIGELKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELQKL 269

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L +  N L+ +    G    L+ LIL++N L  LP +I  L  L +L +  N L++LP
Sbjct: 270 TILKVDQNRLSTLNSNIGRCENLQELILTENFLLELPVTIGKLHNLNNLNVDRNSLQSLP 329

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           TEI  LK    +L  L L +NKL+ LP E+     L  L +  N L
Sbjct: 330 TEIGNLK----QLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRL 371



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 65/215 (30%), Positives = 96/215 (44%), Gaps = 29/215 (13%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP 102
           IE+LP +   K P  +  L L HN L   P    +   L  LD+S NR+  LP+ I    
Sbjct: 187 IEVLPAH-IGKLPA-LQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPEEIGGLE 244

Query: 103 -LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE---------------------- 139
            L+ L    N++  E LP  +  L+ L +  +  N+L                       
Sbjct: 245 SLTDLHLSQNVI--EKLPDGLGELQKLTILKVDQNRLSTLNSNIGRCENLQELILTENFL 302

Query: 140 -QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
            + P+ I  +  L  L +  NSL  +P EI  L +L VLSL  N L  +P   G    L 
Sbjct: 303 LELPVTIGKLHNLNNLNVDRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPIEVGQCTALH 362

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
            L +S N+L+ LP S+ NL  LK++ L  N+ + +
Sbjct: 363 VLDVSGNRLQYLPYSLINLN-LKAVWLSKNQAQPM 396



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/192 (29%), Positives = 89/192 (46%), Gaps = 15/192 (7%)

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           ++L+   L  N +   P     +  L+ L L +N ++ +P +I     L  L +  N + 
Sbjct: 37  RSLEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIP 96

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           DIP+   +L  L+    S N +  LPA    L+ L  L L++  L  LP +  +L    E
Sbjct: 97  DIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSL----E 152

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKV 305
            L+SL L  N L++LP  +  L  L  L L DN   I  +     K P+L EL       
Sbjct: 153 ALQSLELRENLLKSLPESLSQLYKLERLDLGDND--IEVLPAHIGKLPALQELW------ 204

Query: 306 HEIDYSQ-EHLP 316
             +D++Q +HLP
Sbjct: 205 --LDHNQLQHLP 214


>gi|322510677|gb|ADX05991.1| leucine-rich repeat-containing protein [Organic Lake phycodnavirus
           1]
          Length = 707

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 86/246 (34%), Positives = 128/246 (52%), Gaps = 22/246 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N+  L L +N +   PD+    T LRSL + +N++  LP++I N   L  L  R+N+LT
Sbjct: 65  DNLQILSLKNNKIVSLPDSIGNLTKLRSLTMGDNKLFLLPESIGNLIHLENLDIRSNILT 124

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP+ +  LK L    L  N L + P  I+++  L  L L NN +  +P  I +L K+
Sbjct: 125 --RLPESIGELKKLSFLILDDNNLNELPETIVNLSNLTNLSLRNNKITTIPENIGQLVKI 182

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             + L  N L+ +P++FG+L +LE L L+ N L +LP S  NL  +K L L+NN+L  +P
Sbjct: 183 KNMLLNNNQLSSLPESFGNLVKLEKLFLTYNMLVTLPKSFDNLINIKILELNNNRLIQIP 242

Query: 235 TEIITLKCLSEK-------------------LKSLLLHNNKLRTLPTEIITLKCLSELSL 275
             I +L  L +                    LKSL++ NN+L TLP  I  L  L  L L
Sbjct: 243 ENIGSLTLLEKISLQDNKLTMLPESMCNLTLLKSLIIMNNQLTTLPARIGKLNNLENLFL 302

Query: 276 RDNPLV 281
            +N L 
Sbjct: 303 ENNLLT 308



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 122/223 (54%), Gaps = 7/223 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L +N L    +  S+  NL+ L L NN+I  LP +I N   L +L   +N L    LP
Sbjct: 47  LYLDNNQLDTLSEIISELDNLQILSLKNNKIVSLPDSIGNLTKLRSLTMGDNKLFL--LP 104

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
           + + NL +L+  ++  N L + P  I ++  L +L L +N+LN +P  I  L  L  LSL
Sbjct: 105 ESIGNLIHLENLDIRSNILTRLPESIGELKKLSFLILDDNNLNELPETIVNLSNLTNLSL 164

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N +T IP+  G L +++ ++L++NQL SLP S  NL  L+ L L  N L TLP     
Sbjct: 165 RNNKITTIPENIGQLVKIKNMLLNNNQLSSLPESFGNLVKLEKLFLTYNMLVTLPKSFDN 224

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           L      +K L L+NN+L  +P  I +L  L ++SL+DN L +
Sbjct: 225 LI----NIKILELNNNRLIQIPENIGSLTLLEKISLQDNKLTM 263



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 123/226 (54%), Gaps = 13/226 (5%)

Query: 45  LLPNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI 98
           +L +N+ N+ PE      N+  L L +N ++  P+N  +   ++++ L+NN+++ LP++ 
Sbjct: 140 ILDDNNLNELPETIVNLSNLTNLSLRNNKITTIPENIGQLVKIKNMLLNNNQLSSLPESF 199

Query: 99  TNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
            N   L  L    N+L   +LPK   NL N+K+  L+ N+L Q P  I  +  L+ + L 
Sbjct: 200 GNLVKLEKLFLTYNMLV--TLPKSFDNLINIKILELNNNRLIQIPENIGSLTLLEKISLQ 257

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           +N L  +P  +  L  L  L +  N LT +P   G L  LE L L +N L +LP SI +L
Sbjct: 258 DNKLTMLPESMCNLTLLKSLIIMNNQLTTLPARIGKLNNLENLFLENNLLTALPESIGDL 317

Query: 218 KMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTE 263
           + +  LLL NN+L TLP +   L  L+    +L L NN+L TLP +
Sbjct: 318 RKISILLLKNNQLTTLPEQFQYLTNLN----TLTLKNNQLTTLPEQ 359



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 61/149 (40%), Positives = 87/149 (58%), Gaps = 4/149 (2%)

Query: 133 LSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFG 192
           LSG  L   P  +L++  LK LYL NN L+ +   I++L  L +LSL  N +  +PD+ G
Sbjct: 26  LSGQNLTTLPPSLLNLIQLKKLYLDNNQLDTLSEIISELDNLQILSLKNNKIVSLPDSIG 85

Query: 193 DLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLL 252
           +L +L +L + DN+L  LP SI NL  L++L + +N L  LP  I  LK    KL  L+L
Sbjct: 86  NLTKLRSLTMGDNKLFLLPESIGNLIHLENLDIRSNILTRLPESIGELK----KLSFLIL 141

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            +N L  LP  I+ L  L+ LSLR+N + 
Sbjct: 142 DDNNLNELPETIVNLSNLTNLSLRNNKIT 170



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/164 (37%), Positives = 86/164 (52%), Gaps = 4/164 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LP  + NL  LK   L  NQL+     I ++  L+ L L NN +  +P  I  L KL  
Sbjct: 33  TLPPSLLNLIQLKKLYLDNNQLDTLSEIISELDNLQILSLKNNKIVSLPDSIGNLTKLRS 92

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L++G N L  +P++ G+L  LE L +  N L  LP SI  LK L  L+L +N L  LP  
Sbjct: 93  LTMGDNKLFLLPESIGNLIHLENLDIRSNILTRLPESIGELKKLSFLILDDNNLNELPET 152

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I+ L  L+    +L L NNK+ T+P  I  L  +  + L +N L
Sbjct: 153 IVNLSNLT----NLSLRNNKITTIPENIGQLVKIKNMLLNNNQL 192



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/136 (36%), Positives = 70/136 (51%), Gaps = 3/136 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPL-STLIARNNLLTA 115
           NI  L L +N L   P+N    T L  + L +N++T LP+++ N  L  +LI  NN LT 
Sbjct: 227 NIKILELNNNRLIQIPENIGSLTLLEKISLQDNKLTMLPESMCNLTLLKSLIIMNNQLT- 285

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LP  +  L NL+   L  N L   P  I D+  +  L L NN L  +P +   L  L+
Sbjct: 286 -TLPARIGKLNNLENLFLENNLLTALPESIGDLRKISILLLKNNQLTTLPEQFQYLTNLN 344

Query: 176 VLSLGGNSLTDIPDTF 191
            L+L  N LT +P+ F
Sbjct: 345 TLTLKNNQLTTLPEQF 360


>gi|75907715|ref|YP_322011.1| small GTP-binding protein domain-containing protein [Anabaena
           variabilis ATCC 29413]
 gi|75701440|gb|ABA21116.1| Small GTP-binding protein domain protein [Anabaena variabilis ATCC
           29413]
          Length = 1107

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 81/246 (32%), Positives = 125/246 (50%), Gaps = 26/246 (10%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L+L+ N ++  P+  +K TNL  LDLS+N+IT +P+AI N   L+ LI  +N +T 
Sbjct: 127 NLTHLILFSNQITETPEAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTHLILFSNQITE 186

Query: 116 ---------------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYL 154
                                  +PK ++NL NL   +L  NQ+ + P  I ++  L +L
Sbjct: 187 IPEAIANLTNLTQLDLGDNQITEIPKAIANLTNLTQLDLGDNQITEIPKAIANLTNLTHL 246

Query: 155 YLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASI 214
            L +N +  +P  I  L  L  L L  N +T+IP    +L  L  L+LSDN++  +P +I
Sbjct: 247 ILFSNQITEIPEAIANLTNLMQLDLSYNQITEIPKAIANLTNLTQLVLSDNKITEIPEAI 306

Query: 215 SNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           +NL  L  L L +NK+  +P  I  L  L+E    L  + NK+  +   I  L  L+EL 
Sbjct: 307 ANLTNLTQLDLSDNKITEIPETIANLTNLTE----LYFNYNKITQIAEAIAKLTNLTELH 362

Query: 275 LRDNPL 280
           L  N +
Sbjct: 363 LSSNQI 368



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 119/224 (53%), Gaps = 7/224 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           ++ L+L    ++  P+  +  TNL  L L +N+IT  P+AI     L+ L   +N +T  
Sbjct: 105 LEELILIRVEITEIPEAIANLTNLTHLILFSNQITETPEAIAKLTNLTQLDLSDNQIT-- 162

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            +P+ ++NL NL    L  NQ+ + P  I ++  L  L LG+N +  +P+ I  L  L  
Sbjct: 163 EIPEAIANLTNLTHLILFSNQITEIPEAIANLTNLTQLDLGDNQITEIPKAIANLTNLTQ 222

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L LG N +T+IP    +L  L  LIL  NQ+  +P +I+NL  L  L L  N++  +P  
Sbjct: 223 LDLGDNQITEIPKAIANLTNLTHLILFSNQITEIPEAIANLTNLMQLDLSYNQITEIPKA 282

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L  L++    L+L +NK+  +P  I  L  L++L L DN +
Sbjct: 283 IANLTNLTQ----LVLSDNKITEIPEAIANLTNLTQLDLSDNKI 322



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/206 (32%), Positives = 108/206 (52%), Gaps = 7/206 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L+L+ N ++  P+  +  TNL  LDLS N+IT +P+AI N   L+ L+  +N +T 
Sbjct: 242 NLTHLILFSNQITEIPEAIANLTNLMQLDLSYNQITEIPKAIANLTNLTQLVLSDNKIT- 300

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+ ++NL NL   +LS N++ + P  I ++  L  LY   N +  +   I KL  L 
Sbjct: 301 -EIPEAIANLTNLTQLDLSDNKITEIPETIANLTNLTELYFNYNKITQIAEAIAKLTNLT 359

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N +T IP+   +L  L  L L+ N++  +  +I+ L  L  L L  N++  +P 
Sbjct: 360 ELHLSSNQITQIPEAIANLTNLTELYLNYNKITQIAEAIAKLTNLTELHLDGNQITQIPE 419

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLP 261
            + +L     KL+ L L  N L   P
Sbjct: 420 ALESLP----KLEKLDLRGNPLPISP 441



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 105/216 (48%), Gaps = 7/216 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTAESLPKDMSN 124
           NNL   P       NLR LD+S N +  +P  +T    L  LI     +T   +P+ ++N
Sbjct: 67  NNLKTLPLELLGLPNLRKLDISGNPLERIPDLVTQILHLEELILIRVEIT--EIPEAIAN 124

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L NL    L  NQ+ + P  I  +  L  L L +N +  +P  I  L  L  L L  N +
Sbjct: 125 LTNLTHLILFSNQITETPEAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTHLILFSNQI 184

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T+IP+   +L  L  L L DNQ+  +P +I+NL  L  L L +N++  +P  I  L  L+
Sbjct: 185 TEIPEAIANLTNLTQLDLGDNQITEIPKAIANLTNLTQLDLGDNQITEIPKAIANLTNLT 244

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
                L+L +N++  +P  I  L  L +L L  N +
Sbjct: 245 H----LILFSNQITEIPEAIANLTNLMQLDLSYNQI 276



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 74/236 (31%), Positives = 112/236 (47%), Gaps = 32/236 (13%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLI-------------------ARNNLLTAESLP 119
             R LDLS   +T LP  I     L +LI                   + NNL T   LP
Sbjct: 17  GWRELDLSGQELTELPGEIGKLQQLESLILGKQVGGYEWVGDRYLKKVSGNNLKT---LP 73

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            ++  L NL+  ++SGN LE+ P  +  I  L+ L L    +  +P  I  L  L  L L
Sbjct: 74  LELLGLPNLRKLDISGNPLERIPDLVTQILHLEELILIRVEITEIPEAIANLTNLTHLIL 133

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N +T+ P+    L  L  L LSDNQ+  +P +I+NL  L  L+L +N++  +P  I  
Sbjct: 134 FSNQITETPEAIAKLTNLTQLDLSDNQITEIPEAIANLTNLTHLILFSNQITEIPEAIAN 193

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN-----PLVIRFVSDMTY 290
           L  L++    L L +N++  +P  I  L  L++L L DN     P  I  ++++T+
Sbjct: 194 LTNLTQ----LDLGDNQITEIPKAIANLTNLTQLDLGDNQITEIPKAIANLTNLTH 245



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/178 (34%), Positives = 91/178 (51%), Gaps = 3/178 (1%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L+L  N ++  P+  +  TNL  LDLS+N+IT +P+ I N   L+ L    N +T 
Sbjct: 288 NLTQLVLSDNKITEIPEAIANLTNLTQLDLSDNKITEIPETIANLTNLTELYFNYNKIT- 346

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             + + ++ L NL   +LS NQ+ Q P  I ++  L  LYL  N +  +   I KL  L 
Sbjct: 347 -QIAEAIAKLTNLTELHLSSNQITQIPEAIANLTNLTELYLNYNKITQIAEAIAKLTNLT 405

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
            L L GN +T IP+    L +LE L L  N L   P  + ++  + S+    N LR L
Sbjct: 406 ELHLDGNQITQIPEALESLPKLEKLDLRGNPLPISPEILGSVYEVGSVEEIFNYLRLL 463


>gi|426250981|ref|XP_004019210.1| PREDICTED: leucine-rich repeat-containing protein 1 [Ovis aries]
          Length = 473

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 78/209 (37%), Positives = 117/209 (55%), Gaps = 7/209 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 101 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS- 159

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 160 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLEMLPDGIGKLKKLS 218

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+  GD   L  L+L++N+L +LP SI  LK L +L    NKL +LP 
Sbjct: 219 ILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPK 278

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           EI    C S  L    + +N+L  +P E+
Sbjct: 279 EIG--GCCS--LTVFCVRDNRLTRIPAEV 303



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 125/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N++   P++ S    L+  D S N +T LP++  
Sbjct: 15  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 74

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 75  ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 133

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 134 EIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 193

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTL 260
           L  L++  N L  LP  I  LK LS                   E L  L+L  N+L TL
Sbjct: 194 LTDLVISQNLLEMLPDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENRLLTL 253

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK LS L+   N LV
Sbjct: 254 PKSIGKLKKLSNLNADRNKLV 274



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 75/204 (36%), Positives = 106/204 (51%), Gaps = 9/204 (4%)

Query: 77  KFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTAESLPKDMSNLKNLKVFNLS 134
           +   LR L LS+N I  LP  I NF  L  L ++RN++     +P+ +S  K L++ + S
Sbjct: 6   QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDI---PEIPESISFCKALQIADFS 62

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
           GN L + P    ++  L  L + + SL  +P  I  L  L  L L  N LT +PD+   L
Sbjct: 63  GNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQL 122

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
            +LE L L +N++ +LP SI  L  LK L L  N+L  LP EI  LK     L  L +  
Sbjct: 123 RRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLK----NLLCLDVSE 178

Query: 255 NKLRTLPTEIITLKCLSELSLRDN 278
           N+L  LP EI  L  L++L +  N
Sbjct: 179 NRLERLPEEISGLTSLTDLVISQN 202



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 80/156 (51%), Gaps = 4/156 (2%)

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L  L+   LS N++++ P +I +   L  L +  N +  +P  I+    L +    GN L
Sbjct: 7   LVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPL 66

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T +P++F +L  L  L ++D  L+SLP +I NL  L SL L  N L  LP  +  L+   
Sbjct: 67  TRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLR--- 123

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L+ L L NN++  LP  I  L  L +L L  N L
Sbjct: 124 -RLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQL 158


>gi|224048615|ref|XP_002195329.1| PREDICTED: leucine-rich repeat-containing protein 1 [Taeniopygia
           guttata]
          Length = 524

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 88/248 (35%), Positives = 129/248 (52%), Gaps = 15/248 (6%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTA 115
           N+ +L L  N L++ P++ ++   L  LDL NN + HLP+ I   F L  L    N L  
Sbjct: 152 NLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLA- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+++ NLKNL   ++S N+LE  P +I  + +L  L +  N L  +P  I KL +L 
Sbjct: 211 -EIPQEVGNLKNLLCLDVSENKLECLPEEISGLTSLTDLLVSQNLLQVLPDGIGKLRRLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N L  + D+ GD   L  L+L++NQL+SLP SI  LK L +L    NKL +LP 
Sbjct: 270 ILKVDQNKLIQLTDSIGDCESLTELVLTENQLQSLPKSIGKLKKLNNLNADRNKLTSLPK 329

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
           E+    C S  L    + +N+L  +P+EI     L  L +  N L        TY P SL
Sbjct: 330 EVG--GCCS--LNVFSVRDNRLSRIPSEISQATELHVLDVAGNRL--------TYLPISL 377

Query: 296 LELASRTL 303
             L  + L
Sbjct: 378 TTLRLKAL 385



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 125/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      L  N++   P++ S    L+  D S N +T LP++  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCRALQIADFSGNPLTRLPESFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + ++LP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 126 ELQNLTCLSVNDI-SLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLEELDLGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L H+P  I  L  L  L L GN L +IP   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 185 ELYHLPETIGALFNLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECLPEEISGLTS 244

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTL 260
           L  LL+  N L+ LP  I  L+ LS                   E L  L+L  N+L++L
Sbjct: 245 LTDLLVSQNLLQVLPDGIGKLRRLSILKVDQNKLIQLTDSIGDCESLTELVLTENQLQSL 304

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK L+ L+   N L 
Sbjct: 305 PKSIGKLKKLNNLNADRNKLT 325



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 85/249 (34%), Positives = 121/249 (48%), Gaps = 32/249 (12%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTA 115
           ++ LLL  N L   P    +   LR L LS+N I  LP  I NF  L  L ++RN++   
Sbjct: 38  LEELLLDANQLRELPKPFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDI--- 94

Query: 116 ESLPKDMSNLKNLKVFNLSGNQL----EQFP------------IQILDIP-------TLK 152
             +P+ +S  + L++ + SGN L    E FP            I +  +P        L 
Sbjct: 95  PEIPESISFCRALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLA 154

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            L L  N L ++P  + +L +L  L LG N L  +P+T G L+ L+ L L  NQL  +P 
Sbjct: 155 SLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLAEIPQ 214

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSE 272
            + NLK L  L +  NKL  LP EI  L  L++    LL+  N L+ LP  I  L+ LS 
Sbjct: 215 EVGNLKNLLCLDVSENKLECLPEEISGLTSLTD----LLVSQNLLQVLPDGIGKLRRLSI 270

Query: 273 LSLRDNPLV 281
           L +  N L+
Sbjct: 271 LKVDQNKLI 279



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 65/203 (32%), Positives = 99/203 (48%), Gaps = 8/203 (3%)

Query: 81  LRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           + S+D  +  +  +P+ I  +   L  L+   N L    LPK    L  L+   LS N++
Sbjct: 14  VESIDKRHCSLAAVPEEIYRYSRSLEELLLDANQL--RELPKPFFQLVKLRKLGLSDNEI 71

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
           ++ P +I +   L  L L  N +  +P  I+    L +    GN LT +P++F +L  L 
Sbjct: 72  QRLPPEIANFMQLVELDLSRNDIPEIPESISFCRALQIADFSGNPLTRLPESFPELQNLT 131

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L ++D  L++LP +I NL  L SL L  N L  LP  +  L    ++L+ L L NN+L 
Sbjct: 132 CLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQL----QRLEELDLGNNELY 187

Query: 259 TLPTEIITLKCLSELSLRDNPLV 281
            LP  I  L  L +L L  N L 
Sbjct: 188 HLPETIGALFNLKDLWLDGNQLA 210



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 64/220 (29%), Positives = 98/220 (44%), Gaps = 33/220 (15%)

Query: 46  LPNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN+    PE      N+  L L  N L+  P       NL  LD+S N++  LP+ I+
Sbjct: 181 LGNNELYHLPETIGALFNLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECLPEEIS 240

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFN-----------------------LSG 135
               L+ L+   NLL  + LP  +  L+ L +                         L+ 
Sbjct: 241 GLTSLTDLLVSQNLL--QVLPDGIGKLRRLSILKVDQNKLIQLTDSIGDCESLTELVLTE 298

Query: 136 NQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLY 195
           NQL+  P  I  +  L  L    N L  +P+E+   C L+V S+  N L+ IP       
Sbjct: 299 NQLQSLPKSIGKLKKLNNLNADRNKLTSLPKEVGGCCSLNVFSVRDNRLSRIPSEISQAT 358

Query: 196 QLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L  L ++ N+L  LP S++ L+ LK+L L +N+ + L T
Sbjct: 359 ELHVLDVAGNRLTYLPISLTTLR-LKALWLSDNQSQPLLT 397


>gi|333983716|ref|YP_004512926.1| adenylate cyclase [Methylomonas methanica MC09]
 gi|333807757|gb|AEG00427.1| Adenylate cyclase [Methylomonas methanica MC09]
          Length = 504

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 96/279 (34%), Positives = 137/279 (49%), Gaps = 46/279 (16%)

Query: 45  LLPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI 98
           +L  N   + PE+I  L+      L  N L+  P++    T LRSL LS N++T LP++I
Sbjct: 169 ILSGNQLTELPESISKLINLTNLSLSDNKLNILPESIGNLTKLRSLTLSGNQLTKLPKSI 228

Query: 99  TNF-PLSTL-IARNNLL----------------------------------TAESLPKDM 122
            N   LS L +A NNL                                   T + LP+ +
Sbjct: 229 GNLRKLSELSLAGNNLTEVPECIGNLINLTSLSLGSGSRGVLKTKSPESNDTLKKLPESI 288

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
            NLK LK F++   QL + P  I ++  L+ L+L NN L  +P  I  L KL  L L  N
Sbjct: 289 GNLKMLKSFSIGSTQLTKLPESIGNLTNLRELFLENNQLIELPESIGNLTKLDDLRLSYN 348

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            L  +PD  G+L +L+ +IL +NQL  LP SI N+  L  L L +N+L  LP  +  L  
Sbjct: 349 QLIKLPDCIGNLTKLKRIILENNQLIDLPESIGNMTNLVELRLSDNQLIKLPESLGNLT- 407

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
              KL+ L L++N+L  +P  I  L  L+ LS+ DN +V
Sbjct: 408 ---KLEYLQLNHNRLVEIPEAIGNLTKLTRLSIGDNQIV 443



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 99/268 (36%), Positives = 125/268 (46%), Gaps = 47/268 (17%)

Query: 57  NIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF--------- 101
           N DT+L      L HN L+  PD   K  NL  LDLSNN++T LP++I N          
Sbjct: 65  NKDTILSLTHLDLRHNQLTEVPDYIGKLINLTCLDLSNNQLTKLPESIGNLTRLTDLYLQ 124

Query: 102 --PLSTL---IARNNLLT---------AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILD 147
              LS L   I R   LT          + LP  + NL NL    LSGNQL + P  I  
Sbjct: 125 FNKLSDLPESIGRLTNLTNSLWLSNNQLKKLPDSIGNLSNLTGIILSGNQLTELPESISK 184

Query: 148 IPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQL 207
           +  L  L L +N LN +P  I  L KL  L+L GN LT +P + G+L +L  L L+ N L
Sbjct: 185 LINLTNLSLSDNKLNILPESIGNLTKLRSLTLSGNQLTKLPKSIGNLRKLSELSLAGNNL 244

Query: 208 ESLPASISNLKMLKSLLLH--------------NNKLRTLPTEIITLKCLSEKLKSLLLH 253
             +P  I NL  L SL L               N+ L+ LP  I  LK     LKS  + 
Sbjct: 245 TEVPECIGNLINLTSLSLGSGSRGVLKTKSPESNDTLKKLPESIGNLKM----LKSFSIG 300

Query: 254 NNKLRTLPTEIITLKCLSELSLRDNPLV 281
           + +L  LP  I  L  L EL L +N L+
Sbjct: 301 STQLTKLPESIGNLTNLRELFLENNQLI 328



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/195 (36%), Positives = 99/195 (50%), Gaps = 11/195 (5%)

Query: 48  NNDYNKKPENIDTLLLYHN------NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           N+   K PE+I  L +  +       L+  P++    TNLR L L NN++  LP++I N 
Sbjct: 278 NDTLKKLPESIGNLKMLKSFSIGSTQLTKLPESIGNLTNLRELFLENNQLIELPESIGNL 337

Query: 102 -PLSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
             L  L ++ N L+    LP  + NL  LK   L  NQL   P  I ++  L  L L +N
Sbjct: 338 TKLDDLRLSYNQLI---KLPDCIGNLTKLKRIILENNQLIDLPESIGNMTNLVELRLSDN 394

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L  +P  +  L KL  L L  N L +IP+  G+L +L  L + DNQ+  LP SI NL  
Sbjct: 395 QLIKLPESLGNLTKLEYLQLNHNRLVEIPEAIGNLTKLTRLSIGDNQIVELPESIGNLSK 454

Query: 220 LKSLLLHNNKLRTLP 234
           L  L LH N++  LP
Sbjct: 455 LTRLCLHKNQITKLP 469



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 107/199 (53%), Gaps = 5/199 (2%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           +TQ+  LP +  N    N+  L L +N L   P++    T L  L LS N++  LP  I 
Sbjct: 301 STQLTKLPESIGNLT--NLRELFLENNQLIELPESIGNLTKLDDLRLSYNQLIKLPDCIG 358

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
           N   L  +I  NN L    LP+ + N+ NL    LS NQL + P  + ++  L+YL L +
Sbjct: 359 NLTKLKRIILENNQLI--DLPESIGNMTNLVELRLSDNQLIKLPESLGNLTKLEYLQLNH 416

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P  I  L KL  LS+G N + ++P++ G+L +L  L L  NQ+  LP S   LK
Sbjct: 417 NRLVEIPEAIGNLTKLTRLSIGDNQIVELPESIGNLSKLTRLCLHKNQITKLPESFGKLK 476

Query: 219 MLKSLLLHNNKLRTLPTEI 237
            LK L L++N ++ LP E+
Sbjct: 477 KLKDLYLNSNPIKYLPAEL 495



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 62/179 (34%), Positives = 95/179 (53%), Gaps = 9/179 (5%)

Query: 46  LPNNDYNKKPENI------DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN   + PE+I      D L L +N L   PD     T L+ + L NN++  LP++I 
Sbjct: 322 LENNQLIELPESIGNLTKLDDLRLSYNQLIKLPDCIGNLTKLKRIILENNQLIDLPESIG 381

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
           N   L  L   +N L    LP+ + NL  L+   L+ N+L + P  I ++  L  L +G+
Sbjct: 382 NMTNLVELRLSDNQLIK--LPESLGNLTKLEYLQLNHNRLVEIPEAIGNLTKLTRLSIGD 439

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           N +  +P  I  L KL  L L  N +T +P++FG L +L+ L L+ N ++ LPA +S+L
Sbjct: 440 NQIVELPESIGNLSKLTRLCLHKNQITKLPESFGKLKKLKDLYLNSNPIKYLPAELSHL 498



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 57/136 (41%), Positives = 73/136 (53%), Gaps = 5/136 (3%)

Query: 148 IPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQL 207
           I +L +L L +N L  VP  I KL  L  L L  N LT +P++ G+L +L  L L  N+L
Sbjct: 69  ILSLTHLDLRHNQLTEVPDYIGKLINLTCLDLSNNQLTKLPESIGNLTRLTDLYLQFNKL 128

Query: 208 ESLPASISNLKML-KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIIT 266
             LP SI  L  L  SL L NN+L+ LP  I  L  L+     ++L  N+L  LP  I  
Sbjct: 129 SDLPESIGRLTNLTNSLWLSNNQLKKLPDSIGNLSNLT----GIILSGNQLTELPESISK 184

Query: 267 LKCLSELSLRDNPLVI 282
           L  L+ LSL DN L I
Sbjct: 185 LINLTNLSLSDNKLNI 200


>gi|427738149|ref|YP_007057693.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
           7116]
 gi|427373190|gb|AFY57146.1| Leucine Rich Repeat (LRR)-containing protein [Rivularia sp. PCC
           7116]
          Length = 989

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/209 (40%), Positives = 118/209 (56%), Gaps = 6/209 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L +N LS  P   ++ +NL++LDL +N+++ LP  I     L  L    N L+ 
Sbjct: 169 NLQNLDLRYNQLSSLPAEIAQLSNLQNLDLWHNKLSSLPAEIAQLSNLQNLDLSFNKLS- 227

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLP ++  L NL+  +L  NQL   P++I+ +  L+ L L +N LN +  EI +L  L 
Sbjct: 228 -SLPAEIVQLSNLQNLDLRYNQLSNLPVEIVQLSNLQSLNLTSNQLNSLLIEIFQLTSLQ 286

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L+L  N L+ +P   G L  L++L LS N+L SLPA I  L  L+SL L NN+L  LPT
Sbjct: 287 SLNLSHNKLSSLPVEIGQLNSLQSLNLSYNKLSSLPAEIGQLTCLQSLNLRNNQLNRLPT 346

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           EI  L      LK L L NN L+ LP EI
Sbjct: 347 EIGHLHL---HLKVLTLDNNPLKFLPAEI 372



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 92/245 (37%), Positives = 125/245 (51%), Gaps = 23/245 (9%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLS-NNRITHLPQAITNFP-LSTLIARNNLLT 114
           N+ +L L  N LS  P   ++ +NL+SLDLS NN++  LP  I     L +L  R N L+
Sbjct: 99  NLQSLHLEENQLSSLPAEIARLSNLQSLDLSYNNKLIGLPAEIVQLSNLQSLRLRGNKLS 158

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLP ++  L NL+  +L  NQL   P +I  +  L+ L L +N L+ +P EI +L  L
Sbjct: 159 --SLPTEVVQLSNLQNLDLRYNQLSSLPAEIAQLSNLQNLDLWHNKLSSLPAEIAQLSNL 216

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L+ +P     L  L+ L L  NQL +LP  I  L  L+SL L +N+L +L 
Sbjct: 217 QNLDLSFNKLSSLPAEIVQLSNLQNLDLRYNQLSNLPVEIVQLSNLQSLNLTSNQLNSLL 276

Query: 235 TEIITLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            EI  L  L                      L+SL L  NKL +LP EI  L CL  L+L
Sbjct: 277 IEIFQLTSLQSLNLSHNKLSSLPVEIGQLNSLQSLNLSYNKLSSLPAEIGQLTCLQSLNL 336

Query: 276 RDNPL 280
           R+N L
Sbjct: 337 RNNQL 341



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/225 (36%), Positives = 118/225 (52%), Gaps = 8/225 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLTA 115
           ++ L +  N L   P    + TNL+SL L  N+++ LP  I     L +L ++ NN L  
Sbjct: 77  LEELQIIRNQLDNLPAEIVQLTNLQSLHLEENQLSSLPAEIARLSNLQSLDLSYNNKLIG 136

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP ++  L NL+   L GN+L   P +++ +  L+ L L  N L+ +P EI +L  L 
Sbjct: 137 --LPAEIVQLSNLQSLRLRGNKLSSLPTEVVQLSNLQNLDLRYNQLSSLPAEIAQLSNLQ 194

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L+ +P     L  L+ L LS N+L SLPA I  L  L++L L  N+L  LP 
Sbjct: 195 NLDLWHNKLSSLPAEIAQLSNLQNLDLSFNKLSSLPAEIVQLSNLQNLDLRYNQLSNLPV 254

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI+ L      L+SL L +N+L +L  EI  L  L  L+L  N L
Sbjct: 255 EIVQLS----NLQSLNLTSNQLNSLLIEIFQLTSLQSLNLSHNKL 295



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 114/250 (45%), Gaps = 39/250 (15%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLT 114
            E  + L L    L+  P    K T L+ L L  ++          + + T+    N L+
Sbjct: 15  AEGWEELDLSGKGLTTLPPEIGKLTQLKKLILGKHKYDQ------GYIIDTI---GNKLS 65

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L  L+   +  NQL+  P +I+ +  L+ L+L  N L+ +P EI +L  L
Sbjct: 66  --ELPKEIGWLAQLEELQIIRNQLDNLPAEIVQLTNLQSLHLEENQLSSLPAEIARLSNL 123

Query: 175 HVLSLG------------------------GNSLTDIPDTFGDLYQLEALILSDNQLESL 210
             L L                         GN L+ +P     L  L+ L L  NQL SL
Sbjct: 124 QSLDLSYNNKLIGLPAEIVQLSNLQSLRLRGNKLSSLPTEVVQLSNLQNLDLRYNQLSSL 183

Query: 211 PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
           PA I+ L  L++L L +NKL +LP EI  L      L++L L  NKL +LP EI+ L  L
Sbjct: 184 PAEIAQLSNLQNLDLWHNKLSSLPAEIAQLS----NLQNLDLSFNKLSSLPAEIVQLSNL 239

Query: 271 SELSLRDNPL 280
             L LR N L
Sbjct: 240 QNLDLRYNQL 249



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/126 (34%), Positives = 58/126 (46%), Gaps = 17/126 (13%)

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILS-------------DNQLESLPASISNLKMLKSL 223
           L L G  LT +P   G L QL+ LIL               N+L  LP  I  L  L+ L
Sbjct: 21  LDLSGKGLTTLPPEIGKLTQLKKLILGKHKYDQGYIIDTIGNKLSELPKEIGWLAQLEEL 80

Query: 224 LLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
            +  N+L  LP EI+ L      L+SL L  N+L +LP EI  L  L  L L  N  +I 
Sbjct: 81  QIIRNQLDNLPAEIVQLT----NLQSLHLEENQLSSLPAEIARLSNLQSLDLSYNNKLIG 136

Query: 284 FVSDMT 289
             +++ 
Sbjct: 137 LPAEIV 142



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 74/150 (49%), Gaps = 7/150 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L+       + T+L+SL+LS+N+++ LP  I     L +L    N L+ 
Sbjct: 261 NLQSLNLTSNQLNSLLIEIFQLTSLQSLNLSHNKLSSLPVEIGQLNSLQSLNLSYNKLS- 319

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPT-LKYLYLGNNSLNHVPREINKLCKL 174
            SLP ++  L  L+  NL  NQL + P +I  +   LK L L NN L  +P EI      
Sbjct: 320 -SLPAEIGQLTCLQSLNLRNNQLNRLPTEIGHLHLHLKVLTLDNNPLKFLPAEIRNRHSQ 378

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSD 204
            +L+     L     T   LY+ + LI+ +
Sbjct: 379 RILNFYKQQLE---QTIDRLYEAKLLIIGE 405



 Score = 40.0 bits (92), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 15/124 (12%)

Query: 19  FKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKF 78
           F+  S+++L+ S++ L S  L  +I  L          ++ +L L +N LS  P    + 
Sbjct: 280 FQLTSLQSLNLSHNKLSS--LPVEIGQL---------NSLQSLNLSYNKLSSLPAEIGQL 328

Query: 79  TNLRSLDLSNNRITHLPQAIT--NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGN 136
           T L+SL+L NN++  LP  I   +  L  L   NN L    LP ++ N  + ++ N    
Sbjct: 329 TCLQSLNLRNNQLNRLPTEIGHLHLHLKVLTLDNNPLKF--LPAEIRNRHSQRILNFYKQ 386

Query: 137 QLEQ 140
           QLEQ
Sbjct: 387 QLEQ 390


>gi|410939195|ref|ZP_11371030.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410785700|gb|EKR74656.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 410

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 76/227 (33%), Positives = 115/227 (50%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +  NL+ LDLS+NR T LP+ I     L  L    N  T
Sbjct: 118 QNLKRLFLSLNQLTSLPKEIGQLQNLQELDLSSNRFTTLPKEIGQLQNLQELDLSGNQFT 177

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+  +LS N+    P ++  + +L+ L L  N    +P+EI +   +
Sbjct: 178 --TLPKEIGQLQNLQKLDLSNNRFTTLPKEVGQLQSLEELDLSGNQFTTLPKEIRRRQNI 235

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L GN LT +    G    L+ L LS N+  +LP  I  L+ L++L L  N+  T P
Sbjct: 236 RWLNLAGNQLTSLSKEIGQFQNLQGLDLSKNRFTTLPKEIGQLQNLETLNLSGNRFTTFP 295

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            E+       E +  L L +N+L+ LP EI   + L  L L+ N L 
Sbjct: 296 KEVRR----QENITWLYLDDNQLKALPKEIGQFQHLEGLFLKGNQLT 338



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 114/226 (50%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N LS  P    +  NL+ L LS N++T LP+ I     L  L   +N  T
Sbjct: 95  QNLQGLFLNINRLSSLPQEIGQLQNLKRLFLSLNQLTSLPKEIGQLQNLQELDLSSNRFT 154

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+  +LSGNQ    P +I  +  L+ L L NN    +P+E+ +L  L
Sbjct: 155 --TLPKEIGQLQNLQELDLSGNQFTTLPKEIGQLQNLQKLDLSNNRFTTLPKEVGQLQSL 212

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L GN  T +P        +  L L+ NQL SL   I   + L+ L L  N+  TLP
Sbjct: 213 EELDLSGNQFTTLPKEIRRRQNIRWLNLAGNQLTSLSKEIGQFQNLQGLDLSKNRFTTLP 272

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L    + L++L L  N+  T P E+   + ++ L L DN L
Sbjct: 273 KEIGQL----QNLETLNLSGNRFTTFPKEVRRQENITWLYLDDNQL 314



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 109/224 (48%), Gaps = 7/224 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N  +  P    +  NL+ LDLSNNR T LP+ +     L  L    N  T
Sbjct: 164 QNLQELDLSGNQFTTLPKEIGQLQNLQKLDLSNNRFTTLPKEVGQLQSLEELDLSGNQFT 223

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++   +N++  NL+GNQL     +I     L+ L L  N    +P+EI +L  L
Sbjct: 224 --TLPKEIRRRQNIRWLNLAGNQLTSLSKEIGQFQNLQGLDLSKNRFTTLPKEIGQLQNL 281

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L GN  T  P        +  L L DNQL++LP  I   + L+ L L  N+L +LP
Sbjct: 282 ETLNLSGNRFTTFPKEVRRQENITWLYLDDNQLKALPKEIGQFQHLEGLFLKGNQLTSLP 341

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  L+ L +   S     N+  T P EI  L+ L  L L  N
Sbjct: 342 KEIEQLQNLQQLDLS----KNRFTTFPKEIEQLQNLKLLRLYSN 381



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 77/229 (33%), Positives = 110/229 (48%), Gaps = 30/229 (13%)

Query: 55  PENIDTL--LLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNL 112
           PEN+  L  L     L+  P+   +  NLR L+L+ +++T                    
Sbjct: 46  PENVFELSFLFNREQLTSIPNAIGRLQNLRILELTGSQLT-------------------- 85

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
               SLPK++  L+NL+   L+ N+L   P +I  +  LK L+L  N L  +P+EI +L 
Sbjct: 86  ----SLPKEIGRLQNLQGLFLNINRLSSLPQEIGQLQNLKRLFLSLNQLTSLPKEIGQLQ 141

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N  T +P   G L  L+ L LS NQ  +LP  I  L+ L+ L L NN+  T
Sbjct: 142 NLQELDLSSNRFTTLPKEIGQLQNLQELDLSGNQFTTLPKEIGQLQNLQKLDLSNNRFTT 201

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP E+  L+ L E    L L  N+  TLP EI   + +  L+L  N L 
Sbjct: 202 LPKEVGQLQSLEE----LDLSGNQFTTLPKEIRRRQNIRWLNLAGNQLT 246



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/190 (33%), Positives = 96/190 (50%), Gaps = 9/190 (4%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN +   P+ +  L       L  N  +  P    +  N+R L+L+ N++T L + I 
Sbjct: 194 LSNNRFTTLPKEVGQLQSLEELDLSGNQFTTLPKEIRRRQNIRWLNLAGNQLTSLSKEIG 253

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
            F  L  L    N  T  +LPK++  L+NL+  NLSGN+   FP ++     + +LYL +
Sbjct: 254 QFQNLQGLDLSKNRFT--TLPKEIGQLQNLETLNLSGNRFTTFPKEVRRQENITWLYLDD 311

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P+EI +   L  L L GN LT +P     L  L+ L LS N+  + P  I  L+
Sbjct: 312 NQLKALPKEIGQFQHLEGLFLKGNQLTSLPKEIEQLQNLQQLDLSKNRFTTFPKEIEQLQ 371

Query: 219 MLKSLLLHNN 228
            LK L L++N
Sbjct: 372 NLKLLRLYSN 381



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/157 (31%), Positives = 72/157 (45%), Gaps = 26/157 (16%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI-------------- 98
           ++ +NI  L L  N L+       +F NL+ LDLS NR T LP+ I              
Sbjct: 230 RRRQNIRWLNLAGNQLTSLSKEIGQFQNLQGLDLSKNRFTTLPKEIGQLQNLETLNLSGN 289

Query: 99  --TNFP--------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDI 148
             T FP        ++ L   +N L A  LPK++   ++L+   L GNQL   P +I  +
Sbjct: 290 RFTTFPKEVRRQENITWLYLDDNQLKA--LPKEIGQFQHLEGLFLKGNQLTSLPKEIEQL 347

Query: 149 PTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
             L+ L L  N     P+EI +L  L +L L  NS +
Sbjct: 348 QNLQQLDLSKNRFTTFPKEIEQLQNLKLLRLYSNSFS 384


>gi|124009107|ref|ZP_01693790.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123985321|gb|EAY25241.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 419

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 114/214 (53%), Gaps = 6/214 (2%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSN 124
           +N +   PD   + T L+ L L++N +TH+   I    L+ L   N   T   LP  ++ 
Sbjct: 190 NNKIEVLPDAIGQLTGLKRLVLADNPLTHISDEIGK--LNNLEYLNLENTQVDLPPTLAQ 247

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L  L++ +LS N   + P Q+ ++  L+ L LG N L  +P  INKL  L  L L  N L
Sbjct: 248 LDRLEILDLSQNCFTELPWQVSELSGLRLLILGRNKLTQLPATINKLQGLQELYLNMNDL 307

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T +PD+ GDL  L+ L +  N+L + P S  NL+ L+ L L +N+L  +P EI  L    
Sbjct: 308 TFLPDSIGDLVNLKVLFVPGNKLTTFPKSFKNLQQLEILQLDSNQLACIPQEIFML---- 363

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           + LK L++ +N+L  +P EI  LK L  L L  N
Sbjct: 364 QNLKDLIIRDNQLVHIPEEIKQLKKLESLYLEKN 397



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 97/220 (44%), Gaps = 30/220 (13%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           +IE+LP  D   +   +  L+L  N L+   D   K  NL  L+L N ++   P      
Sbjct: 192 KIEVLP--DAIGQLTGLKRLVLADNPLTHISDEIGKLNNLEYLNLENTQVDLPPTLAQLD 249

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L  L    N  T   LP  +S L  L++  L  N+L Q P  I  +  L+ LYL  N L
Sbjct: 250 RLEILDLSQNCFT--ELPWQVSELSGLRLLILGRNKLTQLPATINKLQGLQELYLNMNDL 307

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL--------------------- 200
             +P  I  L  L VL + GN LT  P +F +L QLE L                     
Sbjct: 308 TFLPDSIGDLVNLKVLFVPGNKLTTFPKSFKNLQQLEILQLDSNQLACIPQEIFMLQNLK 367

Query: 201 --ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
             I+ DNQL  +P  I  LK L+SL L  N    LPTE+I
Sbjct: 368 DLIIRDNQLVHIPEEIKQLKKLESLYLEKN---NLPTEVI 404



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 74/259 (28%), Positives = 121/259 (46%), Gaps = 52/259 (20%)

Query: 84  LDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
           L+ +++    +P+ I  F  +  LI  +NLLT   LP +MS L +LK  NL  N  ++FP
Sbjct: 71  LEFTDHPAVQIPKEIALFQHVEELILYDNLLTC--LPMEMSQLTHLKKLNLFHNPFKEFP 128

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
             +  IP L++LY+ +  ++ +P  I ++  L   S+    ++ +P     L+QL+ L+L
Sbjct: 129 CVVCQIPQLEWLYISSKEISSLPPAIAQMRALRWFSIVNTQVSGLPPELFQLHQLQELLL 188

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI------------------------- 237
           S+N++E LP +I  L  LK L+L +N L  +  EI                         
Sbjct: 189 SNNKIEVLPDAIGQLTGLKRLVLADNPLTHISDEIGKLNNLEYLNLENTQVDLPPTLAQL 248

Query: 238 -------ITLKCLSE---------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                  ++  C +E          L+ L+L  NKL  LP  I  L+ L EL L  N   
Sbjct: 249 DRLEILDLSQNCFTELPWQVSELSGLRLLILGRNKLTQLPATINKLQGLQELYLNMN--- 305

Query: 282 IRFVSDMTYKPPSLLELAS 300
                D+T+ P S+ +L +
Sbjct: 306 -----DLTFLPDSIGDLVN 319


>gi|327279924|ref|XP_003224705.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1-like
           [Anolis carolinensis]
          Length = 1010

 Score =  112 bits (280), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 85/272 (31%), Positives = 136/272 (50%), Gaps = 13/272 (4%)

Query: 12  DSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFF 71
           D   + +     ++ L+ S++ L +E+       LP    + +   ++ L L  N L   
Sbjct: 119 DEGRALALLGGQLRKLNLSHNQLGAESEGA----LPAGLAHLR--CLEELDLSFNRLRRL 172

Query: 72  PDNA-SKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLK 129
           P+ + +    LR+LD+ +N++   P A+ +   L  L    N L   +LP+ +S L  LK
Sbjct: 173 PERSLAPLQRLRALDVDHNQLGAFPNALLSLGALEELDCSGNRLL-RALPEGISALHRLK 231

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
           V  LSG  LE  P  +  +  L+ L L  N L  +P     L +L +L+L  N L+D P 
Sbjct: 232 VLWLSGTGLEALPEGLCRLAALESLMLDGNRLVALPAGFGGLQRLKMLNLSSNLLSDFPT 291

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
               L  LE L LS NQL  LP  +S L+ L++L L NN+LR LP  ++ L+    +L+ 
Sbjct: 292 AILALPGLEELYLSRNQLSLLPGGVSQLQQLRTLWLDNNRLRFLPDAVVQLR----QLEE 347

Query: 250 LLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L+L  N++  LP     L  +S   ++DNPL+
Sbjct: 348 LVLQGNQIAILPEGFGQLSRVSLWKIKDNPLI 379



 Score = 97.4 bits (241), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 80/229 (34%), Positives = 112/229 (48%), Gaps = 16/229 (6%)

Query: 63  LYHNNLSF-----FPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIA---RNNLLT 114
           L HN L        P   +    L  LDLS NR+  LP+  +  PL  L A    +N L 
Sbjct: 136 LSHNQLGAESEGALPAGLAHLRCLEELDLSFNRLRRLPER-SLAPLQRLRALDVDHNQLG 194

Query: 115 AESLPKDMSNLKNLKVFNLSGNQL-EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           A   P  + +L  L+  + SGN+L    P  I  +  LK L+L    L  +P  + +L  
Sbjct: 195 A--FPNALLSLGALEELDCSGNRLLRALPEGISALHRLKVLWLSGTGLEALPEGLCRLAA 252

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L GN L  +P  FG L +L+ L LS N L   P +I  L  L+ L L  N+L  L
Sbjct: 253 LESLMLDGNRLVALPAGFGGLQRLKMLNLSSNLLSDFPTAILALPGLEELYLSRNQLSLL 312

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P  +  L    ++L++L L NN+LR LP  ++ L+ L EL L+ N + I
Sbjct: 313 PGGVSQL----QQLRTLWLDNNRLRFLPDAVVQLRQLEELVLQGNQIAI 357



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/171 (34%), Positives = 83/171 (48%), Gaps = 3/171 (1%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           L   P+  S    L+ L LS   +  LP+ +     L +L+   N L A  LP     L+
Sbjct: 217 LRALPEGISALHRLKVLWLSGTGLEALPEGLCRLAALESLMLDGNRLVA--LPAGFGGLQ 274

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
            LK+ NLS N L  FP  IL +P L+ LYL  N L+ +P  +++L +L  L L  N L  
Sbjct: 275 RLKMLNLSSNLLSDFPTAILALPGLEELYLSRNQLSLLPGGVSQLQQLRTLWLDNNRLRF 334

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
           +PD    L QLE L+L  NQ+  LP     L  +    + +N L   P E+
Sbjct: 335 LPDAVVQLRQLEELVLQGNQIAILPEGFGQLSRVSLWKIKDNPLIQPPYEV 385



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 73/262 (27%), Positives = 104/262 (39%), Gaps = 64/262 (24%)

Query: 79  TNLRSLDLSNNRITHLPQ---AITNFPLSTLIARNNLLT--------------------- 114
           + L SL L    +  LP+   A     LS L  R N L                      
Sbjct: 52  SRLSSLALVGRGLEELPEGLCAAVGGELSALSLRRNRLAQLPPPSALRHLVRLSELDLSH 111

Query: 115 -------------------------------AES---LPKDMSNLKNLKVFNLSGNQLEQ 140
                                          AES   LP  +++L+ L+  +LS N+L +
Sbjct: 112 NRLRGLRDEGRALALLGGQLRKLNLSHNQLGAESEGALPAGLAHLRCLEELDLSFNRLRR 171

Query: 141 FPIQILD-IPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS-LTDIPDTFGDLYQLE 198
            P + L  +  L+ L + +N L   P  +  L  L  L   GN  L  +P+    L++L+
Sbjct: 172 LPERSLAPLQRLRALDVDHNQLGAFPNALLSLGALEELDCSGNRLLRALPEGISALHRLK 231

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L LS   LE+LP  +  L  L+SL+L  N+L  LP     L    ++LK L L +N L 
Sbjct: 232 VLWLSGTGLEALPEGLCRLAALESLMLDGNRLVALPAGFGGL----QRLKMLNLSSNLLS 287

Query: 259 TLPTEIITLKCLSELSLRDNPL 280
             PT I+ L  L EL L  N L
Sbjct: 288 DFPTAILALPGLEELYLSRNQL 309


>gi|441611945|ref|XP_003271467.2| PREDICTED: LOW QUALITY PROTEIN: malignant fibrous
           histiocytoma-amplified sequence 1 [Nomascus leucogenys]
          Length = 1089

 Score =  112 bits (280), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 117/244 (47%), Gaps = 29/244 (11%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA------ 115
           L HN L   P       +L  LD+S NR+ HLP +++    L TL   +N L A      
Sbjct: 142 LSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSRLRTLNVDHNQLNAFPRQLL 201

Query: 116 ------------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
                               LP+D+S L+ LK+  LSG +L   P    ++ +L+ L L 
Sbjct: 202 QLAALXELDVWDVSSNRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLD 261

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           NN L  +P + + L +L +L+L  N   + P     L  LE L LS NQL S+P+ IS L
Sbjct: 262 NNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGL 321

Query: 218 KMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRD 277
             L +L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++D
Sbjct: 322 GRLLTLWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDNFGQLSRVGLWKIKD 377

Query: 278 NPLV 281
           NPL+
Sbjct: 378 NPLI 381



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 86/297 (28%), Positives = 126/297 (42%), Gaps = 72/297 (24%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +I+ L L +N L   P+   S   +LR L L  NR   LP A+      L+ L   +N L
Sbjct: 64  DIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 123

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI--------LDI---------------PT 150
           TA    + +S L+ ++  NLS NQL   P Q+        LD+                 
Sbjct: 124 TALGA-EVVSALREMRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLSR 182

Query: 151 LKYLYLGNNSLNHVPR--------------------------EINKLCKLHVLSLGGNSL 184
           L+ L + +N LN  PR                          +I+ L  L +L L G  L
Sbjct: 183 LRTLNVDHNQLNAFPRQLLQLAALXELDVWDVSSNRLRGLPEDISALRALKILWLSGAEL 242

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
             +P  F +L  LE+L+L +N L++LPA  S L+ LK L L +N     P  ++ L  L 
Sbjct: 243 GTLPAGFCELASLESLMLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLE 302

Query: 245 E-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           E                   +L +L L NN++R LP  I+ L  L EL L+ N + +
Sbjct: 303 ELYLSRNQLTSVPSLISGLGRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAV 359



 Score = 84.7 bits (208), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 85/173 (49%), Gaps = 3/173 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L   P++ S    L+ L LS   +  LP        L +L+  NN L A  LP   S 
Sbjct: 217 NRLRGLPEDISALRALKILWLSGAELGTLPAGFCELASLESLMLDNNGLQA--LPAQFSC 274

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ LK+ NLS N  E+FP  +L +  L+ LYL  N L  VP  I+ L +L  L L  N +
Sbjct: 275 LQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLGRLLTLWLDNNRI 334

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
             +PD+  +L  LE L+L  NQ+  LP +   L  +    + +N L   P E+
Sbjct: 335 RYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEV 387



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 7/142 (4%)

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILD-IPTLKYLYLGNNSLNHVPREINKLC-KLHVLSLG 180
           +NL +++  NL  N LE+ P  +   + +L+ L L  N    +P  + +L   L  L + 
Sbjct: 60  ANLGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVS 119

Query: 181 GNSLTDI-PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
            N LT +  +    L ++  L LS NQL +LPA +  L  L+ L +  N+L  LP    +
Sbjct: 120 HNRLTALGAEVVSALREMRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPD---S 176

Query: 240 LKCLSEKLKSLLLHNNKLRTLP 261
           L CLS +L++L + +N+L   P
Sbjct: 177 LSCLS-RLRTLNVDHNQLNAFP 197



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 5/113 (4%)

Query: 171 LCKLHVLSLGGNSLTDIPDTFGD-LYQLEALILSDNQLESLPASISNLKM-LKSLLLHNN 228
           L  +  L+LG N L ++P+  G  L  L  L+L  N+   LP +++ L   L  L + +N
Sbjct: 62  LGDIEALNLGNNGLEEVPEGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHN 121

Query: 229 KLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +L  L  E+++   L E ++ L L +N+L  LP ++  L  L EL +  N L 
Sbjct: 122 RLTALGAEVVS--ALRE-MRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLA 171


>gi|359462280|ref|ZP_09250843.1| leucine-rich repeat-containing protein [Acaryochloris sp. CCMEE
           5410]
          Length = 1235

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 85/225 (37%), Positives = 112/225 (49%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L  N L+  P    K  NL  L L  NR+T +P+ I     L+ L    N LT 
Sbjct: 67  NLIALSLSGNQLTEVPKEIGKLANLTQLRLHQNRLTEVPEEIGQLASLTELSLFQNQLT- 125

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +PK++  L NL    LS NQL + P  +  + +L  LYL  N L   P+E+ KL  L 
Sbjct: 126 -EVPKEIGQLINLTELYLSQNQLMKIPKDLERLISLTKLYLSQNQLTEAPKELGKLINLM 184

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT++P  FG L  L  L LS N+L  +P  +  LK L  L L  NKL  +P 
Sbjct: 185 ELYLSQNQLTEVPKEFGQLTSLIKLNLSQNRLTGVPQELGELKSLTELHLSQNKLMEVPK 244

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           E+  L  L+     L +  N+L  +P EI  L  L+ELSL  N L
Sbjct: 245 ELGKLTNLT----WLHIDQNQLTEIPEEIGQLTKLTELSLSHNQL 285



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L  N L   P    K TNL  L +  N++T +P+ I     L+ L   +N L  + +P
Sbjct: 232 LHLSQNKLMEVPKELGKLTNLTWLHIDQNQLTEIPEEIGQLTKLTELSLSHNQL--KEVP 289

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
           K++  L  L  F+LS NQL + P +I  I  L +L +  N L  VPRE+++L  L  L L
Sbjct: 290 KELGQLARLTRFSLSQNQLIEIPKEIGKIAKLIWLRIDQNQLTEVPRELSQLVNLTRLHL 349

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N LT IP   G + +L  L LS NQL  +P  +  L  L  L L+ N+L  +P E+  
Sbjct: 350 HQNQLTKIPKELGKVTKLTELSLSQNQLIEVPKELGQLINLVELRLNQNQLTKVPKELGK 409

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L  L+     L L  NKL  +P E+  L  L EL L  N L
Sbjct: 410 LTNLTR----LHLSYNKLIEVPKELGKLASLRELDLDQNQL 446



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 87/280 (31%), Positives = 133/280 (47%), Gaps = 36/280 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLT 114
           N+  L L  N L+  P    + T+L  L+LS NR+T +PQ +     L+ L +++N L+ 
Sbjct: 182 NLMELYLSQNQLTEVPKEFGQLTSLIKLNLSQNRLTGVPQELGELKSLTELHLSQNKLM- 240

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +PK++  L NL   ++  NQL + P +I  +  L  L L +N L  VP+E+ +L +L
Sbjct: 241 --EVPKELGKLTNLTWLHIDQNQLTEIPEEIGQLTKLTELSLSHNQLKEVPKELGQLARL 298

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
              SL  N L +IP   G + +L  L +  NQL  +P  +S L  L  L LH N+L  +P
Sbjct: 299 TRFSLSQNQLIEIPKEIGKIAKLIWLRIDQNQLTEVPRELSQLVNLTRLHLHQNQLTKIP 358

Query: 235 TEIITLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            E+  +  L+E                    L  L L+ N+L  +P E+  L  L+ L L
Sbjct: 359 KELGKVTKLTELSLSQNQLIEVPKELGQLINLVELRLNQNQLTKVPKELGKLTNLTRLHL 418

Query: 276 RDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHL 315
             N L+          P  L +LAS    + E+D  Q  L
Sbjct: 419 SYNKLI--------EVPKELGKLAS----LRELDLDQNQL 446



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 82/245 (33%), Positives = 119/245 (48%), Gaps = 22/245 (8%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L  N L   P +  +  +L  L LS N++T  P+ +     L  L    N LT 
Sbjct: 136 NLTELYLSQNQLMKIPKDLERLISLTKLYLSQNQLTEAPKELGKLINLMELYLSQNQLT- 194

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +PK+   L +L   NLS N+L   P ++ ++ +L  L+L  N L  VP+E+ KL  L 
Sbjct: 195 -EVPKEFGQLTSLIKLNLSQNRLTGVPQELGELKSLTELHLSQNKLMEVPKELGKLTNLT 253

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L +  N LT+IP+  G L +L  L LS NQL+ +P  +  L  L    L  N+L  +P 
Sbjct: 254 WLHIDQNQLTEIPEEIGQLTKLTELSLSHNQLKEVPKELGQLARLTRFSLSQNQLIEIPK 313

Query: 236 EI------ITLKC----LSE---------KLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           EI      I L+     L+E          L  L LH N+L  +P E+  +  L+ELSL 
Sbjct: 314 EIGKIAKLIWLRIDQNQLTEVPRELSQLVNLTRLHLHQNQLTKIPKELGKVTKLTELSLS 373

Query: 277 DNPLV 281
            N L+
Sbjct: 374 QNQLI 378



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 81/221 (36%), Positives = 109/221 (49%), Gaps = 26/221 (11%)

Query: 83  SLDLSNNRITHLPQAITNFPLSTLIA---RNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
           +LDL + ++T +P+ I    L+ LIA     N LT   +PK++  L NL   +LSGNQL 
Sbjct: 24  TLDLCSLKLTEVPKEIGQ--LTNLIALSLSGNQLT--EVPKEIGKLTNLIALSLSGNQLT 79

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
           + P +I  +  L  L L  N L  VP EI +L  L  LSL  N LT++P   G L  L  
Sbjct: 80  EVPKEIGKLANLTQLRLHQNRLTEVPEEIGQLASLTELSLFQNQLTEVPKEIGQLINLTE 139

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE-------------- 245
           L LS NQL  +P  +  L  L  L L  N+L   P E+  L  L E              
Sbjct: 140 LYLSQNQLMKIPKDLERLISLTKLYLSQNQLTEAPKELGKLINLMELYLSQNQLTEVPKE 199

Query: 246 --KLKSLL---LHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             +L SL+   L  N+L  +P E+  LK L+EL L  N L+
Sbjct: 200 FGQLTSLIKLNLSQNRLTGVPQELGELKSLTELHLSQNKLM 240



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 98/217 (45%), Gaps = 13/217 (5%)

Query: 48  NNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
            N   + PE I  L       L HN L   P    +   L    LS N++  +P+ I   
Sbjct: 259 QNQLTEIPEEIGQLTKLTELSLSHNQLKEVPKELGQLARLTRFSLSQNQLIEIPKEIGKI 318

Query: 102 P-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
             L  L    N LT   +P+++S L NL   +L  NQL + P ++  +  L  L L  N 
Sbjct: 319 AKLIWLRIDQNQLT--EVPRELSQLVNLTRLHLHQNQLTKIPKELGKVTKLTELSLSQNQ 376

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  VP+E+ +L  L  L L  N LT +P   G L  L  L LS N+L  +P  +  L  L
Sbjct: 377 LIEVPKELGQLINLVELRLNQNQLTKVPKELGKLTNLTRLHLSYNKLIEVPKELGKLASL 436

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
           + L L  N+L  +P E+  L     KL  L L NN L
Sbjct: 437 RELDLDQNQLTKVPKELGKLA----KLVILDLSNNSL 469



 Score = 42.0 bits (97), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 5/104 (4%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLTAESL 118
           L L  N L   P    +  NL  L L+ N++T +P+ +     L+ L ++ N L+    +
Sbjct: 370 LSLSQNQLIEVPKELGQLINLVELRLNQNQLTKVPKELGKLTNLTRLHLSYNKLI---EV 426

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLN 162
           PK++  L +L+  +L  NQL + P ++  +  L  L L NNSLN
Sbjct: 427 PKELGKLASLRELDLDQNQLTKVPKELGKLAKLVILDLSNNSLN 470


>gi|45656981|ref|YP_001067.1| hypothetical protein LIC11097 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|45600218|gb|AAS69704.1| cytoplasmic membrane protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|456983452|gb|EMG19761.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 413

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 90/250 (36%), Positives = 130/250 (52%), Gaps = 24/250 (9%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP---LSTLIARN 110
           K +N+  L L+ N L+  P    +  NL+ L LS NR+T LP+ I         +L  +N
Sbjct: 147 KLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKN 206

Query: 111 NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
              T   LPK+++ L+NL+  +L  N+L   P +I  +  L+ L L  N L  +P+EI +
Sbjct: 207 KPFTI--LPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQ 264

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L VL L GN LT +P     L  L+ L L  N+ E+ P  I+  + L+ L L+ N+L
Sbjct: 265 LKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRL 324

Query: 231 RTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLS 271
            TLP EI  L+ L                    +KL+SL L +N+L TLP EI  LK L 
Sbjct: 325 TTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLK 384

Query: 272 ELSLRDNPLV 281
           +L L +NPL+
Sbjct: 385 KLYLHNNPLL 394



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/226 (38%), Positives = 118/226 (52%), Gaps = 9/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L   +N L+  P    K  NL+ L L NN++T LP+ I     L  L   NN LT
Sbjct: 80  QNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLT 139

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+++  L+NL+  NL  N+L   P +I  +  L+ LYL  N L  +P EI +L  L
Sbjct: 140 --TLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESL 197

Query: 175 HVLSLGGNS--LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
             LSLGG +   T +P     L  L+ L L  N+L  LP  I  L+ L+ L L+ N+L  
Sbjct: 198 RKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTI 257

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           LP EI  LK L      L L  N+L  LP EI  L+ L EL+L  N
Sbjct: 258 LPKEIGQLKNLL----VLDLSGNQLTILPKEITQLQNLQELNLEYN 299



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/233 (37%), Positives = 120/233 (51%), Gaps = 9/233 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K P  +  L L  + L   P    +  NL+ L+  NN++T LP+ I     L  L  +NN
Sbjct: 54  KNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNN 113

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  +LP+++  L+NLKV +L+ NQL   P +I  +  L+ L L  N LN +P+EI +L
Sbjct: 114 QLT--TLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRL 171

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILS--DNQLESLPASISNLKMLKSLLLHNNK 229
             L  L L  N LT +P+  G L  L  L L   +     LP  I+ L+ L+ L L  N+
Sbjct: 172 QNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNR 231

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           L  LP EI  L    + L+ L L+ N+L  LP EI  LK L  L L  N L I
Sbjct: 232 LTVLPKEIGQL----QNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTI 280



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 4/111 (3%)

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L + H       S T++ +   +  ++  L LS ++L+ LP  I  L+ L+ L   NN+L
Sbjct: 33  LTQFHAEENHKGSYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQL 92

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            TLP EI  L+ L E    L L NN+L TLP EI  L+ L  L L +N L 
Sbjct: 93  TTLPKEIGKLQNLQE----LHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLT 139


>gi|421087062|ref|ZP_15547903.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421104771|ref|ZP_15565364.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410365081|gb|EKP20476.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410430171|gb|EKP74541.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 405

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 90/250 (36%), Positives = 130/250 (52%), Gaps = 24/250 (9%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP---LSTLIARN 110
           K +N+  L L+ N L+  P    +  NL+ L LS NR+T LP+ I         +L  +N
Sbjct: 139 KLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKN 198

Query: 111 NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
              T   LPK+++ L+NL+  +L  N+L   P +I  +  L+ L L  N L  +P+EI +
Sbjct: 199 KPFTI--LPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQ 256

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L VL L GN LT +P     L  L+ L L  N+ E+ P  I+  + L+ L L+ N+L
Sbjct: 257 LKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRL 316

Query: 231 RTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLS 271
            TLP EI  L+ L                    +KL+SL L +N+L TLP EI  LK L 
Sbjct: 317 TTLPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLK 376

Query: 272 ELSLRDNPLV 281
           +L L +NPL+
Sbjct: 377 KLYLHNNPLL 386



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/226 (38%), Positives = 118/226 (52%), Gaps = 9/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L   +N L+  P    K  NL+ L L NN++T LP+ I     L  L   NN LT
Sbjct: 72  QNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLT 131

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+++  L+NL+  NL  N+L   P +I  +  L+ LYL  N L  +P EI +L  L
Sbjct: 132 --TLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESL 189

Query: 175 HVLSLGGNS--LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
             LSLGG +   T +P     L  L+ L L  N+L  LP  I  L+ L+ L L+ N+L  
Sbjct: 190 RKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTI 249

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           LP EI  LK L      L L  N+L  LP EI  L+ L EL+L  N
Sbjct: 250 LPKEIGQLKNLL----VLDLSGNQLTILPKEITQLQNLQELNLEYN 291



 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 87/233 (37%), Positives = 120/233 (51%), Gaps = 9/233 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K P  +  L L  + L   P    +  NL+ L+  NN++T LP+ I     L  L  +NN
Sbjct: 46  KNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNN 105

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  +LP+++  L+NLKV +L+ NQL   P +I  +  L+ L L  N LN +P+EI +L
Sbjct: 106 QLT--TLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRL 163

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILS--DNQLESLPASISNLKMLKSLLLHNNK 229
             L  L L  N LT +P+  G L  L  L L   +     LP  I+ L+ L+ L L  N+
Sbjct: 164 QNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNR 223

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           L  LP EI  L    + L+ L L+ N+L  LP EI  LK L  L L  N L I
Sbjct: 224 LTVLPKEIGQL----QNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTI 272



 Score = 47.8 bits (112), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 41/111 (36%), Positives = 58/111 (52%), Gaps = 4/111 (3%)

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L + H       S T++ +   +  ++  L LS ++L+ LP  I  L+ L+ L   NN+L
Sbjct: 25  LTQFHAEENHKGSYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQL 84

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            TLP EI  L+ L E    L L NN+L TLP EI  L+ L  L L +N L 
Sbjct: 85  TTLPKEIGKLQNLQE----LHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLT 131


>gi|418677876|ref|ZP_13239150.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400321066|gb|EJO68926.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 285

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/217 (38%), Positives = 113/217 (52%), Gaps = 14/217 (6%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           + ++ LD S   L  +TL  +I  L         +N+  L L  N L+  P+   +  N 
Sbjct: 46  LDVRVLDLSEQKL--KTLPKEIGQL---------QNLQWLNLVTNQLTTLPEEIGQLQNF 94

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           ++L LS NR+T LP+ I     L  L    N  TA   PK++  LKNL+  NL  NQL+ 
Sbjct: 95  QTLVLSKNRLTTLPKEIGQLKNLRELYLNTNQFTA--FPKEIGQLKNLQQLNLYANQLKT 152

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +I  +  L+ L+L  N L  VP E  +L  L +LSL  N LT +P+    L  L  L
Sbjct: 153 LPNEIGQLKNLRELHLSYNQLKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQLKNLREL 212

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            LS NQL++L A I  LK LK L L +N+L TLP EI
Sbjct: 213 HLSYNQLKTLSAEIGQLKNLKKLSLRDNQLTTLPKEI 249



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 83/213 (38%), Positives = 112/213 (52%), Gaps = 7/213 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K P ++  L L    L   P    +  NL+ L+L  N++T LP+ I       TL+   N
Sbjct: 43  KNPLDVRVLDLSEQKLKTLPKEIGQLQNLQWLNLVTNQLTTLPEEIGQLQNFQTLVLSKN 102

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  +LPK++  LKNL+   L+ NQ   FP +I  +  L+ L L  N L  +P EI +L
Sbjct: 103 RLT--TLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQL 160

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L L  N L  +P+  G L  L+ L L+ NQL +LP  I  LK L+ L L  N+L+
Sbjct: 161 KNLRELHLSYNQLKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQLKNLRELHLSYNQLK 220

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           TL  EI  LK     LK L L +N+L TLP EI
Sbjct: 221 TLSAEIGQLK----NLKKLSLRDNQLTTLPKEI 249



 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 82/203 (40%), Positives = 111/203 (54%), Gaps = 7/203 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           ++R LDLS  ++  LP+ I     L  L    N LT  +LP+++  L+N +   LS N+L
Sbjct: 47  DVRVLDLSEQKLKTLPKEIGQLQNLQWLNLVTNQLT--TLPEEIGQLQNFQTLVLSKNRL 104

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
              P +I  +  L+ LYL  N     P+EI +L  L  L+L  N L  +P+  G L  L 
Sbjct: 105 TTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEIGQLKNLR 164

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L LS NQL+++P     LK L+ L L+ N+L TLP EI  LK L E    L L  N+L+
Sbjct: 165 ELHLSYNQLKTVPEETGQLKNLQMLSLNANQLTTLPNEIRQLKNLRE----LHLSYNQLK 220

Query: 259 TLPTEIITLKCLSELSLRDNPLV 281
           TL  EI  LK L +LSLRDN L 
Sbjct: 221 TLSAEIGQLKNLKKLSLRDNQLT 243



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/164 (39%), Positives = 87/164 (53%), Gaps = 4/164 (2%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           L K + N  +++V +LS  +L+  P +I  +  L++L L  N L  +P EI +L     L
Sbjct: 38  LTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQWLNLVTNQLTTLPEEIGQLQNFQTL 97

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            L  N LT +P   G L  L  L L+ NQ  + P  I  LK L+ L L+ N+L+TLP EI
Sbjct: 98  VLSKNRLTTLPKEIGQLKNLRELYLNTNQFTAFPKEIGQLKNLQQLNLYANQLKTLPNEI 157

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             LK L E    L L  N+L+T+P E   LK L  LSL  N L 
Sbjct: 158 GQLKNLRE----LHLSYNQLKTVPEETGQLKNLQMLSLNANQLT 197



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/94 (39%), Positives = 52/94 (55%), Gaps = 4/94 (4%)

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           TD+     +   +  L LS+ +L++LP  I  L+ L+ L L  N+L TLP EI  L    
Sbjct: 36  TDLTKALKNPLDVRVLDLSEQKLKTLPKEIGQLQNLQWLNLVTNQLTTLPEEIGQL---- 91

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           +  ++L+L  N+L TLP EI  LK L EL L  N
Sbjct: 92  QNFQTLVLSKNRLTTLPKEIGQLKNLRELYLNTN 125


>gi|24215665|ref|NP_713146.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074857|ref|YP_005989175.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24196830|gb|AAN50164.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458647|gb|AER03192.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 408

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 90/250 (36%), Positives = 130/250 (52%), Gaps = 24/250 (9%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP---LSTLIARN 110
           K +N+  L L+ N L+  P    +  NL+ L LS NR+T LP+ I         +L  +N
Sbjct: 142 KLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKN 201

Query: 111 NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
              T   LPK+++ L+NL+  +L  N+L   P +I  +  L+ L L  N L  +P+EI +
Sbjct: 202 KPFTI--LPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQ 259

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L VL L GN LT +P     L  L+ L L  N+ E+ P  I+  + L+ L L+ N+L
Sbjct: 260 LKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRL 319

Query: 231 RTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLS 271
            TLP EI  L+ L                    +KL+SL L +N+L TLP EI  LK L 
Sbjct: 320 TTLPKEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLK 379

Query: 272 ELSLRDNPLV 281
           +L L +NPL+
Sbjct: 380 KLYLHNNPLL 389



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/226 (38%), Positives = 118/226 (52%), Gaps = 9/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L   +N L+  P    K  NL+ L L NN++T LP+ I     L  L   NN LT
Sbjct: 75  QNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLT 134

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+++  L+NL+  NL  N+L   P +I  +  L+ LYL  N L  +P EI +L  L
Sbjct: 135 --TLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESL 192

Query: 175 HVLSLGGNS--LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
             LSLGG +   T +P     L  L+ L L  N+L  LP  I  L+ L+ L L+ N+L  
Sbjct: 193 RKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTI 252

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           LP EI  LK L      L L  N+L  LP EI  L+ L EL+L  N
Sbjct: 253 LPKEIGQLKNLL----VLDLSGNQLTILPKEITQLQNLQELNLEYN 294



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 87/233 (37%), Positives = 120/233 (51%), Gaps = 9/233 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K P  +  L L  + L   P    +  NL+ L+  NN++T LP+ I     L  L  +NN
Sbjct: 49  KNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNN 108

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  +LP+++  L+NLKV +L+ NQL   P +I  +  L+ L L  N LN +P+EI +L
Sbjct: 109 QLT--TLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRL 166

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILS--DNQLESLPASISNLKMLKSLLLHNNK 229
             L  L L  N LT +P+  G L  L  L L   +     LP  I+ L+ L+ L L  N+
Sbjct: 167 QNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNR 226

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           L  LP EI  L    + L+ L L+ N+L  LP EI  LK L  L L  N L I
Sbjct: 227 LTVLPKEIGQL----QNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTI 275


>gi|126656423|ref|ZP_01727684.1| hypothetical protein CY0110_22007 [Cyanothece sp. CCY0110]
 gi|126622109|gb|EAZ92816.1| hypothetical protein CY0110_22007 [Cyanothece sp. CCY0110]
          Length = 830

 Score =  112 bits (279), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 83/220 (37%), Positives = 113/220 (51%), Gaps = 16/220 (7%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           SLP ++  L NL   ++ GNQL   P +I ++  L  LYL  N L ++P EI  L KL++
Sbjct: 30  SLPPEIGKLTNLTSLSVLGNQLTNLPSEIGNLYNLTSLYLEKNQLTNLPSEIGNLTKLNI 89

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
             L  N LT++P   G+LY L +L LS NQL +LP  I NL  L SL L NN+L  LP E
Sbjct: 90  FYLEKNQLTNLPSEIGNLYNLTSLHLSGNQLTNLPPEIGNLYDLTSLYLENNQLTNLPRE 149

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
           I  L     KL SL L  N+L  LP EI  L  L  L +R+N         +T  PP + 
Sbjct: 150 IGKL----HKLTSLYLSGNQLTNLPPEIGNLDNLISLVIRNN--------QITNLPPEIE 197

Query: 297 ELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKG 336
              +R +    I++ ++ L QN+    E+    V     G
Sbjct: 198 RKKTRAI----INFYKQQLEQNIDHLYEAKLLIVGEGGAG 233



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 101/179 (56%), Gaps = 3/179 (1%)

Query: 60  TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTAESL 118
           +L L    L+  P    K TNL SL +  N++T+LP  I N + L++L    N LT  +L
Sbjct: 20  SLSLSFKKLTSLPPEIGKLTNLTSLSVLGNQLTNLPSEIGNLYNLTSLYLEKNQLT--NL 77

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P ++ NL  L +F L  NQL   P +I ++  L  L+L  N L ++P EI  L  L  L 
Sbjct: 78  PSEIGNLTKLNIFYLEKNQLTNLPSEIGNLYNLTSLHLSGNQLTNLPPEIGNLYDLTSLY 137

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
           L  N LT++P   G L++L +L LS NQL +LP  I NL  L SL++ NN++  LP EI
Sbjct: 138 LENNQLTNLPREIGKLHKLTSLYLSGNQLTNLPPEIGNLDNLISLVIRNNQITNLPPEI 196



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/130 (43%), Positives = 70/130 (53%), Gaps = 4/130 (3%)

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           K L L    L  +P EI KL  L  LS+ GN LT++P   G+LY L +L L  NQL +LP
Sbjct: 19  KSLSLSFKKLTSLPPEIGKLTNLTSLSVLGNQLTNLPSEIGNLYNLTSLYLEKNQLTNLP 78

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
           + I NL  L    L  N+L  LP+EI  L  L+    SL L  N+L  LP EI  L  L+
Sbjct: 79  SEIGNLTKLNIFYLEKNQLTNLPSEIGNLYNLT----SLHLSGNQLTNLPPEIGNLYDLT 134

Query: 272 ELSLRDNPLV 281
            L L +N L 
Sbjct: 135 SLYLENNQLT 144



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 31/90 (34%), Positives = 47/90 (52%), Gaps = 3/90 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L+  P       +L SL L NN++T+LP+ I     L++L    N LT 
Sbjct: 109 NLTSLHLSGNQLTNLPPEIGNLYDLTSLYLENNQLTNLPREIGKLHKLTSLYLSGNQLT- 167

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQI 145
            +LP ++ NL NL    +  NQ+   P +I
Sbjct: 168 -NLPPEIGNLDNLISLVIRNNQITNLPPEI 196


>gi|456984028|gb|EMG20190.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 229

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/214 (38%), Positives = 116/214 (54%), Gaps = 5/214 (2%)

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLK 129
            FP    KF NLR L L +   + LP+ I+       +A   L   +++P ++  LKNL+
Sbjct: 1   MFPKVILKFRNLRELYLYDCGFSTLPKEISRLKNLKYLALG-LNGLKNIPSEIGQLKNLE 59

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
             NL  N+LE+ P +I  +  L+ L L  N+L   P EI +L KL  L L  N  T  P 
Sbjct: 60  ALNLEANELERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPK 119

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
             G L  L+ L L  NQL +L A I  L+ L+ L L++N+   LP EI  LK    KL++
Sbjct: 120 EIGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLK----KLQT 175

Query: 250 LLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
           L L NN+L TLPTEI  L+ L  L L++N L ++
Sbjct: 176 LDLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLK 209



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/221 (37%), Positives = 112/221 (50%), Gaps = 11/221 (4%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N+  L LY    S  P   S+  NL+ L L  N + ++P  I     L  L    N 
Sbjct: 8   KFRNLRELYLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE 67

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L  E LPK++  L+NL+  +L  N L+ FP +I  +  L+ L L  N     P+EI KL 
Sbjct: 68  L--ERLPKEIGQLRNLQRLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFPKEIGKLE 125

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L+L  N LT++    G L  L+ L L+DNQ   LP  I  LK L++L L NN+L T
Sbjct: 126 NLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTT 185

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTE----IITLKC 269
           LPTEI  L    + L+ L L NN+L     E    ++ LKC
Sbjct: 186 LPTEIGQL----QNLQWLYLQNNQLSLKEQERIRKLLPLKC 222


>gi|410941458|ref|ZP_11373255.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
 gi|410783407|gb|EKR72401.1| leucine rich repeat protein [Leptospira noguchii str. 2006001870]
          Length = 425

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 92/247 (37%), Positives = 128/247 (51%), Gaps = 22/247 (8%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L  N L+  P+   +  NL+ L+L +N++T LP+ I     L  L    N 
Sbjct: 69  KLQNLQVLNLGFNQLTTLPNEVGQLQNLQVLNLYSNKLTILPKEIGKLRNLQVLNLGFNR 128

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT   LP ++  L+NL+  NL  N+L   P +I  +  L+ L L  N L   P+EI KL 
Sbjct: 129 LTI--LPDEVGQLQNLQELNLDLNKLTILPEEIGQLQKLQILDLEGNQLTTFPKEIGKLQ 186

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL VL+LG N LT + +    L  L+ L L  N L +LP  I  L+ L+ L L++ +L+T
Sbjct: 187 KLQVLNLGFNQLTTLREEVVQLQNLQILNLISNPLTTLPKEIGQLQKLQELNLYDIQLKT 246

Query: 233 LPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           LP  II L+ L                     KL+ L L+ N+L TLP EI  LK L EL
Sbjct: 247 LPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQEL 306

Query: 274 SLRDNPL 280
            L +NPL
Sbjct: 307 YLGNNPL 313



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 92/251 (36%), Positives = 128/251 (50%), Gaps = 30/251 (11%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K  N+  L L  N L+  PD   +  NL+ L+L  N++T LP+ I     L  L    N 
Sbjct: 115 KLRNLQVLNLGFNRLTILPDEVGQLQNLQELNLDLNKLTILPEEIGQLQKLQILDLEGNQ 174

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  + PK++  L+ L+V NL  NQL     +++ +  L+ L L +N L  +P+EI +L 
Sbjct: 175 LT--TFPKEIGKLQKLQVLNLGFNQLTTLREEVVQLQNLQILNLISNPLTTLPKEIGQLQ 232

Query: 173 KLHVLSL-------------------GGN----SLTDIPDTFGDLYQLEALILSDNQLES 209
           KL  L+L                   G N     LT +P   G L +L+ L L  NQL +
Sbjct: 233 KLQELNLYDIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLSKLQKLYLYGNQLTT 292

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           LP  I  LK L+ L L NN LRTLP EI  L    +KL++L L +N++ T P EI  L+ 
Sbjct: 293 LPEEIGQLKKLQELYLGNNPLRTLPKEIEQL----QKLQTLHLESNQITTFPKEIGQLQN 348

Query: 270 LSELSLRDNPL 280
           L EL+L  N L
Sbjct: 349 LQELNLGFNQL 359



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 85/229 (37%), Positives = 125/229 (54%), Gaps = 11/229 (4%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT---NFPLSTLIARNNL 112
           + +  L L  N L+ FP    K   L+ L+L  N++T L + +    N  +  LI+  N 
Sbjct: 163 QKLQILDLEGNQLTTFPKEIGKLQKLQVLNLGFNQLTTLREEVVQLQNLQILNLIS--NP 220

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LPK++  L+ L+  NL   QL+  P  I+ +  L+ L L    L  +P+EI +L 
Sbjct: 221 LT--TLPKEIGQLQKLQELNLYDIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEIGQLS 278

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  L L GN LT +P+  G L +L+ L L +N L +LP  I  L+ L++L L +N++ T
Sbjct: 279 KLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKLQTLHLESNQITT 338

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            P EI  L+ L E    L L  N+L TLP EI  L+ L EL+L+ N L 
Sbjct: 339 FPKEIGQLQNLQE----LNLGFNQLTTLPKEIGQLQNLQELNLKFNQLA 383



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/222 (37%), Positives = 121/222 (54%), Gaps = 7/222 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P+++  L L  + L+       K  NL+ L+L  N++T LP  +     L  L   +N L
Sbjct: 47  PKDVRILNLNGSKLATLSKEIGKLQNLQVLNLGFNQLTTLPNEVGQLQNLQVLNLYSNKL 106

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++  L+NL+V NL  N+L   P ++  +  L+ L L  N L  +P EI +L K
Sbjct: 107 TI--LPKEIGKLRNLQVLNLGFNRLTILPDEVGQLQNLQELNLDLNKLTILPEEIGQLQK 164

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L GN LT  P   G L +L+ L L  NQL +L   +  L+ L+ L L +N L TL
Sbjct: 165 LQILDLEGNQLTTFPKEIGKLQKLQVLNLGFNQLTTLREEVVQLQNLQILNLISNPLTTL 224

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
           P EI  L    +KL+ L L++ +L+TLP  II L+ L  L+L
Sbjct: 225 PKEIGQL----QKLQELNLYDIQLKTLPQGIIQLQNLRGLNL 262



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/201 (37%), Positives = 103/201 (51%), Gaps = 7/201 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN-NLLT 114
           +N+  L L  N L+  P    +   L+ L+L + ++  LPQ I    L  L   N N   
Sbjct: 209 QNLQILNLISNPLTTLPKEIGQLQKLQELNLYDIQLKTLPQGI--IQLQNLRGLNLNYTH 266

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L  L+   L GNQL   P +I  +  L+ LYLGNN L  +P+EI +L KL
Sbjct: 267 LTILPKEIGQLSKLQKLYLYGNQLTTLPEEIGQLKKLQELYLGNNPLRTLPKEIEQLQKL 326

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N +T  P   G L  L+ L L  NQL +LP  I  L+ L+ L L  N+L TLP
Sbjct: 327 QTLHLESNQITTFPKEIGQLQNLQELNLGFNQLTTLPKEIGQLQNLQELNLKFNQLATLP 386

Query: 235 TEIITLKCLSEKLKSLLLHNN 255
            EI       +KL+ L L+NN
Sbjct: 387 KEI----GQQQKLRKLNLYNN 403



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/230 (36%), Positives = 118/230 (51%), Gaps = 26/230 (11%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +L K++  L+NL+V NL  NQL   P ++  +  L+ L L +N L  +P+EI KL  L V
Sbjct: 62  TLSKEIGKLQNLQVLNLGFNQLTTLPNEVGQLQNLQVLNLYSNKLTILPKEIGKLRNLQV 121

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+LG N LT +PD  G L  L+ L L  N+L  LP  I  L+ L+ L L  N+L T P E
Sbjct: 122 LNLGFNRLTILPDEVGQLQNLQELNLDLNKLTILPEEIGQLQKLQILDLEGNQLTTFPKE 181

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
           I  L    +KL+ L L  N+L TL  E++ L+ L  L+L  NPL        T  P  + 
Sbjct: 182 IGKL----QKLQVLNLGFNQLTTLREEVVQLQNLQILNLISNPL--------TTLPKEIG 229

Query: 297 ELASRTLKVHEI---DYSQEHLPQNLVQY-------LESAHHCVNPKCKG 336
           +L     K+ E+   D   + LPQ ++Q        L   H  + PK  G
Sbjct: 230 QLQ----KLQELNLYDIQLKTLPQGIIQLQNLRGLNLNYTHLTILPKEIG 275


>gi|418726507|ref|ZP_13285118.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409960417|gb|EKO24171.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 595

 Score =  112 bits (279), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 122/249 (48%), Gaps = 24/249 (9%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLL 113
           +N+  L L  N L+  P    +  NL+ LDL +N++   P  I     L +L ++ N L+
Sbjct: 71  KNLQELNLKWNLLTVLPKEIEQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLI 130

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L+NL+   L  N+L  FP +I  +  L+ L+L  N L  +P+EI +L  
Sbjct: 131 I---LPNEIGRLQNLQDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKN 187

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N  T +P   G L  L+ L L DNQL +LP  I  L+ L+ L L NN+L   
Sbjct: 188 LQTLDLQDNQFTTLPKEIGQLQNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTVF 247

Query: 234 PTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           P EI  L+ L                    + L++L L NN+L   P EI  L+ L +L 
Sbjct: 248 PKEIGQLQNLQMLCSPENRLTALPKEMGQLQNLQTLNLVNNRLTVFPKEIGQLQNLQDLE 307

Query: 275 LRDNPLVIR 283
           L  NP  ++
Sbjct: 308 LLMNPFSLK 316



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/213 (38%), Positives = 116/213 (54%), Gaps = 5/213 (2%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKV 130
           FP    KF NLR L+L +   + LP+ I+       +A   L   +++P ++  LKNL+ 
Sbjct: 368 FPKVILKFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALG-LNGLKNIPSEIGQLKNLEA 426

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NL  N+LE+ P +I  +  L+ L L  N+L   P EI +L KL  L L  N  T     
Sbjct: 427 LNLEANELERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFLKE 486

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
            G L  L+ L L  NQL +L A I  L+ L+ L L++N+   LP EI  LK    KL++L
Sbjct: 487 IGKLENLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLK----KLQTL 542

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
            L NN+L TLPTEI  L+ L  L L++N L ++
Sbjct: 543 DLRNNQLTTLPTEIGQLQNLQWLYLQNNQLSLK 575



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 117/228 (51%), Gaps = 28/228 (12%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLT 114
           P ++  L L    L+  P    +  NL+ L+L                      + NLLT
Sbjct: 47  PLDVRVLNLSGEKLTALPKEIGQLKNLQELNL----------------------KWNLLT 84

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+  +L  NQL  FP  I+++  L+ L L  N L  +P EI +L  L
Sbjct: 85  V--LPKEIEQLENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNL 142

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT  P   G L  L+ L LS+N+L +LP  I  LK L++L L +N+  TLP
Sbjct: 143 QDLGLYKNKLTTFPKEIGQLQNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDNQFTTLP 202

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            EI  L    + L++L L +N+L TLP EI  L+ L EL LR+N L +
Sbjct: 203 KEIGQL----QNLQTLNLQDNQLATLPVEIGQLQNLQELYLRNNRLTV 246



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 82/221 (37%), Positives = 111/221 (50%), Gaps = 11/221 (4%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N+  L LY    S  P   S+  NL+ L L  N + ++P  I     L  L    N 
Sbjct: 374 KFRNLRGLNLYDCGFSTLPKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANE 433

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L  E LPK++  L+NL+  +L  N L+ FP +I  +  L+ L L  N      +EI KL 
Sbjct: 434 L--ERLPKEIGQLRNLQKLSLHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFLKEIGKLE 491

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L+L  N LT++    G L  L+ L L+DNQ   LP  I  LK L++L L NN+L T
Sbjct: 492 NLQTLNLQRNQLTNLTAEIGQLQNLQELDLNDNQFTVLPKEIGKLKKLQTLDLRNNQLTT 551

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTE----IITLKC 269
           LPTEI  L    + L+ L L NN+L     E    ++ LKC
Sbjct: 552 LPTEIGQL----QNLQWLYLQNNQLSLKEQERIRKLLPLKC 588



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 115/261 (44%), Gaps = 44/261 (16%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNN--------RITHLPQAITNFPLSTL- 106
           +N+ TL L +N L+ FP    +  NL+ L+L  N        RI  L      FP S L 
Sbjct: 278 QNLQTLNLVNNRLTVFPKEIGQLQNLQDLELLMNPFSLKERKRIQKL------FPDSNLD 331

Query: 107 ---IARNNLLT----------------------AESLPKDMSNLKNLKVFNLSGNQLEQF 141
              +A N +                        ++S PK +   +NL+  NL        
Sbjct: 332 LREVAENGVYRNLNLAQEEPLKVFELSLEYKDFSQSFPKVILKFRNLRGLNLYDCGFSTL 391

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P +I  +  LKYL LG N L ++P EI +L  L  L+L  N L  +P   G L  L+ L 
Sbjct: 392 PKEISRLKNLKYLALGLNGLKNIPSEIGQLKNLEALNLEANELERLPKEIGQLRNLQKLS 451

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           L  N L+  PA I  LK L+ L L  N+  T   EI  L    E L++L L  N+L  L 
Sbjct: 452 LHQNTLKIFPAEIEQLKKLQKLDLSVNQFTTFLKEIGKL----ENLQTLNLQRNQLTNLT 507

Query: 262 TEIITLKCLSELSLRDNPLVI 282
            EI  L+ L EL L DN   +
Sbjct: 508 AEIGQLQNLQELDLNDNQFTV 528



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 89/165 (53%), Gaps = 4/165 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLSG +L   P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 36  TYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIEQLEN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L   P    +L +LE+L LS+N+L  LP  I  L+ L+ L L+ NKL T 
Sbjct: 96  LQELDLRDNQLATFPAVIVELQKLESLDLSENRLIILPNEIGRLQNLQDLGLYKNKLTTF 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P EI  L    + L+ L L  N+L  LP EI  LK L  L L+DN
Sbjct: 156 PKEIGQL----QNLQKLWLSENRLTALPKEIGQLKNLQTLDLQDN 196



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 39/102 (38%), Positives = 52/102 (50%), Gaps = 11/102 (10%)

Query: 188 PDTFGDLYQ-------LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           P T+ DL +       +  L LS  +L +LP  I  LK L+ L L  N L  LP EI  L
Sbjct: 34  PGTYRDLTKALQNPLDVRVLNLSGEKLTALPKEIGQLKNLQELNLKWNLLTVLPKEIEQL 93

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
               E L+ L L +N+L T P  I+ L+ L  L L +N L+I
Sbjct: 94  ----ENLQELDLRDNQLATFPAVIVELQKLESLDLSENRLII 131


>gi|332023058|gb|EGI63323.1| Protein lap4 [Acromyrmex echinatior]
          Length = 2051

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 121/224 (54%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLT 114
           +++ LLL  N++   P N  +   LR L LS+N I  LP  I NF   +   ++RN++  
Sbjct: 38  SLEELLLDANHIRDLPKNFFRLQRLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDI-- 95

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+++ NL+ L+V + S N + + P   + +  L  L L + SL ++P +   L  L
Sbjct: 96  -PDIPENIKNLQALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPSDFGSLEAL 154

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P++   L +LE L L DN++E LPA I  L  L+ L L +N+L+ LP
Sbjct: 155 QSLELRENLLKSLPESLSQLLKLERLDLGDNEIEELPAHIGQLPALQELWLDHNQLQHLP 214

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK L+     L +  N+L  LP EI  L+ L++L L  N
Sbjct: 215 PEIGELKTLA----CLDVSENRLEDLPDEIGGLESLTDLHLSQN 254



 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 90/268 (33%), Positives = 124/268 (46%), Gaps = 45/268 (16%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQA----------------IT 99
           EN+  L +  N++   P+N      L+  D S+N I  LP                  +T
Sbjct: 83  ENLVELDVSRNDIPDIPENIKNLQALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLT 142

Query: 100 NFP--------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
           N P        L +L  R NLL  +SLP+ +S L  L+  +L  N++E+ P  I  +P L
Sbjct: 143 NLPSDFGSLEALQSLELRENLL--KSLPESLSQLLKLERLDLGDNEIEELPAHIGQLPAL 200

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           + L+L +N L H+P EI +L  L  L +  N L D+PD  G L  L  L LS N +E LP
Sbjct: 201 QELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPDEIGGLESLTDLHLSQNVIEKLP 260

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE-------------------KLKSLLL 252
             +  LK L  L +  N+L TL   I   + L E                    L +L +
Sbjct: 261 DGLGELKKLTILKIDQNRLSTLNPNIGRCENLQELILTENFLLELPLSIGKLYNLNNLNV 320

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDNPL 280
             N L++LP EI  LK L  LSLRDN L
Sbjct: 321 DRNSLQSLPIEIGNLKKLGVLSLRDNKL 348



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 115/226 (50%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E + +L L  N L   P++ S+   L  LDL +N I  LP  I   P L  L   +N L 
Sbjct: 152 EALQSLELRENLLKSLPESLSQLLKLERLDLGDNEIEELPAHIGQLPALQELWLDHNQL- 210

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            + LP ++  LK L   ++S N+LE  P +I  + +L  L+L  N +  +P  + +L KL
Sbjct: 211 -QHLPPEIGELKTLACLDVSENRLEDLPDEIGGLESLTDLHLSQNVIEKLPDGLGELKKL 269

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L +  N L+ +    G    L+ LIL++N L  LP SI  L  L +L +  N L++LP
Sbjct: 270 TILKIDQNRLSTLNPNIGRCENLQELILTENFLLELPLSIGKLYNLNNLNVDRNSLQSLP 329

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  LK    KL  L L +NKL+ LP E+     L  L +  N L
Sbjct: 330 IEIGNLK----KLGVLSLRDNKLQYLPIEVGQCSALHVLDVSGNRL 371



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 96/186 (51%), Gaps = 27/186 (14%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFP--IQ--------------ILDIPT----LKYLYLG 157
           LPK+   L+ L+   LS N++ + P  IQ              I DIP     L+ L + 
Sbjct: 52  LPKNFFRLQRLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDIPENIKNLQALQVA 111

Query: 158 NNSLNHVPR---EINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASI 214
           + S N +PR      +L  L VL L   SLT++P  FG L  L++L L +N L+SLP S+
Sbjct: 112 DFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPSDFGSLEALQSLELRENLLKSLPESL 171

Query: 215 SNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           S L  L+ L L +N++  LP  I  L  L E    L L +N+L+ LP EI  LK L+ L 
Sbjct: 172 SQLLKLERLDLGDNEIEELPAHIGQLPALQE----LWLDHNQLQHLPPEIGELKTLACLD 227

Query: 275 LRDNPL 280
           + +N L
Sbjct: 228 VSENRL 233



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 61/197 (30%), Positives = 85/197 (43%), Gaps = 27/197 (13%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L HN L   P    +   L  LD+S NR+  LP  I     L+ L    N++  E LP
Sbjct: 203 LWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPDEIGGLESLTDLHLSQNVI--EKLP 260

Query: 120 KDMSNLKNLKVFNLSGNQLE-----------------------QFPIQILDIPTLKYLYL 156
             +  LK L +  +  N+L                        + P+ I  +  L  L +
Sbjct: 261 DGLGELKKLTILKIDQNRLSTLNPNIGRCENLQELILTENFLLELPLSIGKLYNLNNLNV 320

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
             NSL  +P EI  L KL VLSL  N L  +P   G    L  L +S N+L  LP S+ N
Sbjct: 321 DRNSLQSLPIEIGNLKKLGVLSLRDNKLQYLPIEVGQCSALHVLDVSGNRLHYLPYSLIN 380

Query: 217 LKMLKSLLLHNNKLRTL 233
           L  LK++ L  N+ + +
Sbjct: 381 LN-LKAVWLSENQAQPM 396



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 46/153 (30%), Positives = 73/153 (47%), Gaps = 4/153 (2%)

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           ++L+   L  N +   P     +  L+ L L +N ++ +P +I     L  L +  N + 
Sbjct: 37  RSLEELLLDANHIRDLPKNFFRLQRLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIP 96

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           DIP+   +L  L+    S N +  LPA    L+ L  L L++  L  LP++  +L    E
Sbjct: 97  DIPENIKNLQALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPSDFGSL----E 152

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+SL L  N L++LP  +  L  L  L L DN
Sbjct: 153 ALQSLELRENLLKSLPESLSQLLKLERLDLGDN 185


>gi|255071327|ref|XP_002507745.1| predicted protein [Micromonas sp. RCC299]
 gi|226523020|gb|ACO69003.1| predicted protein [Micromonas sp. RCC299]
          Length = 419

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/245 (35%), Positives = 121/245 (49%), Gaps = 22/245 (8%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           +++ L+L +N L+  P    + T+L+ L L + ++T LP  I     L  +    N LT 
Sbjct: 121 SLERLILDNNQLTSLPAEIGQLTSLKELGLHHIQLTSLPAEIGQLTSLREVHLYGNQLT- 179

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLP ++  L +L+   L GNQL   P ++  + +L+ L L +N L ++P EI +L  L 
Sbjct: 180 -SLPAEIGQLTSLEKLYLYGNQLTSVPAELWQLTSLEELDLKDNQLTNLPAEIGQLTSLW 238

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L GN LT +P   G L  L  L L+ NQL SLPA I  L  LK L L+ N+L +LP 
Sbjct: 239 QLHLSGNQLTSVPAEIGQLASLTELELNGNQLTSLPAEIGQLTSLKELELNGNQLTSLPA 298

Query: 236 EIITLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           EI  L  L                      L  L LH N+L ++P EI  L  L  L  +
Sbjct: 299 EIGQLTSLRLLSLRDNLLTSVPAEIGQLTSLTELELHGNQLTSVPAEIGLLTSLRGLGFK 358

Query: 277 DNPLV 281
           DN L 
Sbjct: 359 DNQLT 363



 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 113/227 (49%), Gaps = 12/227 (5%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           LY N L+  P    + T+L  L L  N++T +P  +     L  L  ++N LT  +LP +
Sbjct: 173 LYGNQLTSLPAEIGQLTSLEKLYLYGNQLTSVPAELWQLTSLEELDLKDNQLT--NLPAE 230

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L +L   +LSGNQL   P +I  + +L  L L  N L  +P EI +L  L  L L G
Sbjct: 231 IGQLTSLWQLHLSGNQLTSVPAEIGQLASLTELELNGNQLTSLPAEIGQLTSLKELELNG 290

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N LT +P   G L  L  L L DN L S+PA I  L  L  L LH N+L ++P EI  L 
Sbjct: 291 NQLTSLPAEIGQLTSLRLLSLRDNLLTSVPAEIGQLTSLTELELHGNQLTSVPAEIGLLT 350

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN-----PLVIR 283
                L+ L   +N+L +LP EI  L  L  L L  N     P  IR
Sbjct: 351 ----SLRGLGFKDNQLTSLPAEIGQLTSLRGLGLECNLLTSVPAAIR 393



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/207 (35%), Positives = 98/207 (47%), Gaps = 42/207 (20%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++P ++  L  L+  NL GNQL   P +I  + +L  L LG N L  VP EI +L  L  
Sbjct: 19  AVPAELGRLSALRKLNLEGNQLTSMPAEIGQLTSLTELSLGENQLRSVPAEIGQLTSLTE 78

Query: 177 LSLGGNSLTDIPDTFG--------------------DLYQ---LEALILSDNQLESLPAS 213
           L+L  N LT +P   G                    +L+Q   LE LIL +NQL SLPA 
Sbjct: 79  LNLFDNQLTSVPAEIGQLTSLVQLDLEYNHLTSVPAELWQLTSLERLILDNNQLTSLPAE 138

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE-------------------KLKSLLLHN 254
           I  L  LK L LH+ +L +LP EI  L  L E                    L+ L L+ 
Sbjct: 139 IGQLTSLKELGLHHIQLTSLPAEIGQLTSLREVHLYGNQLTSLPAEIGQLTSLEKLYLYG 198

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPLV 281
           N+L ++P E+  L  L EL L+DN L 
Sbjct: 199 NQLTSVPAELWQLTSLEELDLKDNQLT 225



 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 116/241 (48%), Gaps = 15/241 (6%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L  N L+  P    + T+L  L L  N++  +P  I     L+ L   +N LT  S+P +
Sbjct: 35  LEGNQLTSMPAEIGQLTSLTELSLGENQLRSVPAEIGQLTSLTELNLFDNQLT--SVPAE 92

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L +L   +L  N L   P ++  + +L+ L L NN L  +P EI +L  L  L L  
Sbjct: 93  IGQLTSLVQLDLEYNHLTSVPAELWQLTSLERLILDNNQLTSLPAEIGQLTSLKELGLHH 152

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
             LT +P   G L  L  + L  NQL SLPA I  L  L+ L L+ N+L ++P E+  L 
Sbjct: 153 IQLTSLPAEIGQLTSLREVHLYGNQLTSLPAEIGQLTSLEKLYLYGNQLTSVPAELWQLT 212

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASR 301
            L E    L L +N+L  LP EI  L  L +L L  N         +T  P  + +LAS 
Sbjct: 213 SLEE----LDLKDNQLTNLPAEIGQLTSLWQLHLSGN--------QLTSVPAEIGQLASL 260

Query: 302 T 302
           T
Sbjct: 261 T 261



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 73/210 (34%), Positives = 97/210 (46%), Gaps = 26/210 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           +++ L LY N L+  P    + T+L  LDL +N++T+LP  I     L  L    N LT 
Sbjct: 190 SLEKLYLYGNQLTSVPAELWQLTSLEELDLKDNQLTNLPAEIGQLTSLWQLHLSGNQLT- 248

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNH------------ 163
            S+P ++  L +L    L+GNQL   P +I  + +LK L L  N L              
Sbjct: 249 -SVPAEIGQLASLTELELNGNQLTSLPAEIGQLTSLKELELNGNQLTSLPAEIGQLTSLR 307

Query: 164 -----------VPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
                      VP EI +L  L  L L GN LT +P   G L  L  L   DNQL SLPA
Sbjct: 308 LLSLRDNLLTSVPAEIGQLTSLTELELHGNQLTSVPAEIGLLTSLRGLGFKDNQLTSLPA 367

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            I  L  L+ L L  N L ++P  I  L+ 
Sbjct: 368 EIGQLTSLRGLGLECNLLTSVPAAIRELRA 397


>gi|47223557|emb|CAF99166.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 972

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 88/259 (33%), Positives = 127/259 (49%), Gaps = 33/259 (12%)

Query: 55  PENI---DTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN 110
           PE+I   + L L +N+L   PD   S   NLR L L  NR T +P+A+    L  L    
Sbjct: 50  PEDIAEVELLNLGNNSLQELPDGLGSTLNNLRILVLRRNRFTAVPRAV--LELGQLTGAL 107

Query: 111 NLLTA--------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLN 162
            LL            +P+  S L NL+  ++  N+L QFP +IL + +L+ L    N   
Sbjct: 108 QLLEELDISFNELHEIPRSFSGLTNLRTLDVDHNKLNQFPPEILSLGSLEELDCSGNKFE 167

Query: 163 HVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKS 222
           ++P +I KL  L +L L    +  +PDTF  L+ LE+L+L  N L SLPA+ S L+ LK 
Sbjct: 168 NLPADIMKLKFLKILWLSSLHIPSLPDTFCQLHNLESLMLDGNNLTSLPANFSQLQRLKM 227

Query: 223 LLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTE 263
           + L +NK  + P  I ++  L                    EKL +L L NN +  LP  
Sbjct: 228 INLSSNKFESFPEVIFSITGLEELYLSRNKLTHIPEEIGHLEKLDNLWLDNNNITYLPDS 287

Query: 264 IITLKCLSELSLRDNPLVI 282
           I+ L+ L EL L+ N + I
Sbjct: 288 IVDLEMLEELVLQGNQIAI 306



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/205 (34%), Positives = 96/205 (46%), Gaps = 26/205 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-------------- 102
           N+ TL + HN L+ FP       +L  LD S N+  +LP  I                  
Sbjct: 132 NLRTLDVDHNKLNQFPPEILSLGSLEELDCSGNKFENLPADIMKLKFLKILWLSSLHIPS 191

Query: 103 ----------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                     L +L+   N LT  SLP + S L+ LK+ NLS N+ E FP  I  I  L+
Sbjct: 192 LPDTFCQLHNLESLMLDGNNLT--SLPANFSQLQRLKMINLSSNKFESFPEVIFSITGLE 249

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYL  N L H+P EI  L KL  L L  N++T +PD+  DL  LE L+L  NQ+  LP 
Sbjct: 250 ELYLSRNKLTHIPEEIGHLEKLDNLWLDNNNITYLPDSIVDLEMLEELVLQGNQIAILPD 309

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEI 237
           +   L  +    + +N L   P E+
Sbjct: 310 NFGKLSKVNIWKVKDNPLIQPPYEV 334



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 112/225 (49%), Gaps = 7/225 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           ++ L +  N L   P + S  TNLR+LD+ +N++   P  I +   L  L    N    E
Sbjct: 110 LEELDISFNELHEIPRSFSGLTNLRTLDVDHNKLNQFPPEILSLGSLEELDCSGNKF--E 167

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LP D+  LK LK+  LS   +   P     +  L+ L L  N+L  +P   ++L +L +
Sbjct: 168 NLPADIMKLKFLKILWLSSLHIPSLPDTFCQLHNLESLMLDGNNLTSLPANFSQLQRLKM 227

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           ++L  N     P+    +  LE L LS N+L  +P  I +L+ L +L L NN +  LP  
Sbjct: 228 INLSSNKFESFPEVIFSITGLEELYLSRNKLTHIPEEIGHLEKLDNLWLDNNNITYLPDS 287

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I+ L+ L E    L+L  N++  LP     L  ++   ++DNPL+
Sbjct: 288 IVDLEMLEE----LVLQGNQIAILPDNFGKLSKVNIWKVKDNPLI 328


>gi|326916406|ref|XP_003204498.1| PREDICTED: hypothetical protein LOC100543557 [Meleagris gallopavo]
          Length = 1033

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 89/248 (35%), Positives = 128/248 (51%), Gaps = 15/248 (6%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTA 115
           N+ +L L  N L++ P++ ++   L  LDL NN + HLP+ I   F L  L    N L  
Sbjct: 661 NLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLA- 719

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+++ NLKNL   ++S N+LE  P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 720 -EIPQEVGNLKNLLCLDVSENKLECLPEEINGLTSLTDLLVSQNLLQVLPDGIGKLRKLS 778

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N L  + D+ GD   L  L+L++NQL+ LP SI  LK L +L    NKL +LP 
Sbjct: 779 ILKVDQNKLIQLTDSIGDCESLTELVLTENQLQILPKSIGKLKKLNNLNADRNKLISLPK 838

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
           EI    C S  L    + +N+L  +P+EI     L  L +  N L        TY P SL
Sbjct: 839 EIGG--CCS--LNVFSVRDNRLSRIPSEISQATELHVLDVAGNRL--------TYLPFSL 886

Query: 296 LELASRTL 303
             L  + L
Sbjct: 887 TTLKLKAL 894



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/261 (32%), Positives = 125/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      L  N++   P++ S    L+  D S N +T LP++  
Sbjct: 575 LSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFP 634

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + ++LP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 635 ELQNLTCLSVNDI-SLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLEELDLGNN 693

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L H+P  I  L  L  L L GN L +IP   G+L  L  L +S+N+LE LP  I+ L  
Sbjct: 694 ELYHLPETIGALFNLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECLPEEINGLTS 753

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTL 260
           L  LL+  N L+ LP  I  L+ LS                   E L  L+L  N+L+ L
Sbjct: 754 LTDLLVSQNLLQVLPDGIGKLRKLSILKVDQNKLIQLTDSIGDCESLTELVLTENQLQIL 813

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK L+ L+   N L+
Sbjct: 814 PKSIGKLKKLNNLNADRNKLI 834



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 86/246 (34%), Positives = 120/246 (48%), Gaps = 37/246 (15%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTAESL 118
           LLL  ++  FF     +   LR L LS+N I  LP  I NF  L  L ++RN++     +
Sbjct: 555 LLLVEDDQPFF-----QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDI---PEI 606

Query: 119 PKDMSNLKNLKVFNLSGNQL----EQFP------------IQILDIPT-------LKYLY 155
           P+ +S  K L+V + SGN L    E FP            I +  +P        L  L 
Sbjct: 607 PESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLE 666

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           L  N L ++P  + +L +L  L LG N L  +P+T G L+ L+ L L  NQL  +P  + 
Sbjct: 667 LRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLAEIPQEVG 726

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
           NLK L  L +  NKL  LP EI  L  L++    LL+  N L+ LP  I  L+ LS L +
Sbjct: 727 NLKNLLCLDVSENKLECLPEEINGLTSLTD----LLVSQNLLQVLPDGIGKLRKLSILKV 782

Query: 276 RDNPLV 281
             N L+
Sbjct: 783 DQNKLI 788



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 61/203 (30%), Positives = 91/203 (44%), Gaps = 27/203 (13%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+  L L  N L+  P       NL  LD+S N++  LP+ I     L+ L+   NLL  
Sbjct: 707 NLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECLPEEINGLTSLTDLLVSQNLL-- 764

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLN------------- 162
           + LP  +  L+ L +  +  N+L Q    I D  +L  L L  N L              
Sbjct: 765 QVLPDGIGKLRKLSILKVDQNKLIQLTDSIGDCESLTELVLTENQLQILPKSIGKLKKLN 824

Query: 163 ----------HVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
                      +P+EI   C L+V S+  N L+ IP       +L  L ++ N+L  LP 
Sbjct: 825 NLNADRNKLISLPKEIGGCCSLNVFSVRDNRLSRIPSEISQATELHVLDVAGNRLTYLPF 884

Query: 213 SISNLKMLKSLLLHNNKLRTLPT 235
           S++ LK LK+L L +N+ + L T
Sbjct: 885 SLTTLK-LKALWLSDNQSQPLLT 906



 Score = 39.7 bits (91), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 64/151 (42%), Gaps = 34/151 (22%)

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS------ 244
           F  L +L  L LSDN+++ LP  I+N   L  L L  N +  +P  I   K L       
Sbjct: 564 FFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVADFSG 623

Query: 245 -------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYK 291
                        + L  L +++  L+ LP  I  L  L+ L LR+N L        TY 
Sbjct: 624 NPLTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLL--------TYL 675

Query: 292 PPSLLELASRTLKVHEIDYSQE---HLPQNL 319
           P SL +L     ++ E+D       HLP+ +
Sbjct: 676 PESLAQLQ----RLEELDLGNNELYHLPETI 702


>gi|432111692|gb|ELK34766.1| Leucine-rich repeat-containing protein 1, partial [Myotis davidii]
          Length = 510

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 119/222 (53%), Gaps = 16/222 (7%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 34  NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALVHLKDLWLDGNQLS- 92

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 93  -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLS 151

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+T GD   L  L+L++N+L +LP SI  LK L +L    NKL +LP 
Sbjct: 152 ILKVDQNRLTQLPETIGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPK 211

Query: 236 EIITLKCLSE-------------KLKSLLLHNNKLRTLPTEI 264
           E+  +  L+               L    + +N+L  LP E+
Sbjct: 212 EVKIVMTLNAPHLSYLRQIGGCCSLTVFCVRDNRLTRLPAEV 253



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/208 (35%), Positives = 103/208 (49%), Gaps = 20/208 (9%)

Query: 93  HLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
            LP++       T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+
Sbjct: 1   RLPESFPELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLE 59

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            L LGNN + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP 
Sbjct: 60  ELDLGNNEIYNLPESIGALVHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPE 119

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLH 253
            IS L  L  L++  N L T+P  I  LK LS                   E L  L+L 
Sbjct: 120 EISGLTSLTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPETIGDCESLTELVLT 179

Query: 254 NNKLRTLPTEIITLKCLSELSLRDNPLV 281
            N+L TLP  I  LK LS L+   N LV
Sbjct: 180 ENRLLTLPKSIGKLKKLSNLNADRNKLV 207



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 100/237 (42%), Gaps = 50/237 (21%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN+    PE+I  L+      L  N LS  P       NL  LD+S NR+  LP+ I+
Sbjct: 63  LGNNEIYNLPESIGALVHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS 122

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L+ L+   NLL  E++P  +  LK L +  +  N+L Q P  I D  +L  L L  
Sbjct: 123 GLTSLTDLVISQNLL--ETIPDGIGKLKKLSILKVDQNRLTQLPETIGDCESLTELVLTE 180

Query: 159 NSLNHVPREINKL----------------------------------------CKLHVLS 178
           N L  +P+ I KL                                        C L V  
Sbjct: 181 NRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEVKIVMTLNAPHLSYLRQIGGCCSLTVFC 240

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +  N LT +P       +L  L ++ N+L  LP S++ LK LK+L L +N+ + L T
Sbjct: 241 VRDNRLTRLPAEVSQAAELHVLDVAGNRLSHLPLSLTALK-LKALWLSDNQSQPLLT 296


>gi|390940126|ref|YP_006403863.1| hypothetical protein Sulba_0989 [Sulfurospirillum barnesii SES-3]
 gi|390193233|gb|AFL68288.1| leucine-rich repeat (LRR) protein [Sulfurospirillum barnesii SES-3]
          Length = 331

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 91/245 (37%), Positives = 127/245 (51%), Gaps = 21/245 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E I TL L    L+F P++     NL  L ++ NR+  LP++I+    L      NNLL 
Sbjct: 29  EAITTLDLSRKKLTFLPESIGALQNLSVLKITGNRLKVLPKSISLLTNLRNFQCENNLL- 87

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            E LP+D  NL +L + NL+GNQL   P    D+  L  L L  N L+H+      L KL
Sbjct: 88  -EHLPEDFGNLHSLVILNLNGNQLTALPSSFYDLTNLTRLTLAVNRLSHLDIAFKNLKKL 146

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             +SL  N    +PD+FG +  L  L LS N+L +LP+S+S +K L++L+L  N L+ LP
Sbjct: 147 LHVSLDTNYFETLPDSFGSMKSLYFLDLSFNKLTTLPSSLSEIKELETLILEGNALQNLP 206

Query: 235 T-----EIITLKCLSEKLKS-------------LLLHNNKLRTLPTEIITLKCLSELSLR 276
           +      +I L   S +L S             L L NN L+TLP  + TLK L+ L+L 
Sbjct: 207 SLESHDMLIKLNLASNQLHSIDCNLSKLEDLHILCLENNLLQTLPQSLCTLKKLTSLNLS 266

Query: 277 DNPLV 281
            N L 
Sbjct: 267 ANHLT 271



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/165 (32%), Positives = 79/165 (47%), Gaps = 4/165 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LP++++ L+ +   +LS  +L   P  I  +  L  L +  N L  +P+ I+ L  L  
Sbjct: 20  TLPRNLTQLEAITTLDLSRKKLTFLPESIGALQNLSVLKITGNRLKVLPKSISLLTNLRN 79

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
                N L  +P+ FG+L+ L  L L+ NQL +LP+S  +L  L  L L  N+L  L   
Sbjct: 80  FQCENNLLEHLPEDFGNLHSLVILNLNGNQLTALPSSFYDLTNLTRLTLAVNRLSHLDIA 139

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
              LK    KL  + L  N   TLP    ++K L  L L  N L 
Sbjct: 140 FKNLK----KLLHVSLDTNYFETLPDSFGSMKSLYFLDLSFNKLT 180



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 7/101 (6%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K E++  L L +N L   P +      L SL+LS N +THLP+ I     L  L   +N 
Sbjct: 233 KLEDLHILCLENNLLQTLPQSLCTLKKLTSLNLSANHLTHLPECIGQLTQLYELDVEDNA 292

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKY 153
           LT  SLP  + NL  LK   ++ N   + P    +IP+L+Y
Sbjct: 293 LT--SLPNSLENLPLLKNLYIANNHDLKRP----NIPSLEY 327


>gi|255078974|ref|XP_002503067.1| predicted protein [Micromonas sp. RCC299]
 gi|226518333|gb|ACO64325.1| predicted protein [Micromonas sp. RCC299]
          Length = 252

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/220 (36%), Positives = 112/220 (50%), Gaps = 13/220 (5%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN-NLLTAESLPKDMSNLKNLK 129
            P    + + +R L L  N++T +P  I       ++  N N LT  SLP ++  L  LK
Sbjct: 20  VPAEVWRLSAMRKLSLPKNQLTCVPAEIGQLTSLEMLNLNYNQLT--SLPAEVGQLTALK 77

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNN-SLNHVPREINKLCKLHVLSLGGNSLTDIP 188
             +L GNQL   P +I  + +L  L LG    L  VP E+ +L  L  L L  N LT +P
Sbjct: 78  ELSLYGNQLTSVPAEIGQLASLTELNLGGGKQLTSVPAEVGQLTSLERLWLHDNRLTSVP 137

Query: 189 DTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLK 248
              G L  L  L L+ NQL S+PA I  L+ L+ L L++N+L ++P +I  L      L+
Sbjct: 138 AEIGQLASLRELWLNYNQLTSVPAEIGQLRSLRWLFLNDNRLTSVPADIGQLT----SLE 193

Query: 249 SLLLHNNKLRTLPTEIITLKCLSELSLRDN-----PLVIR 283
            L LH N+L ++P EI  L  L +L L DN     P  IR
Sbjct: 194 GLWLHANQLTSVPAEIGQLTSLEKLYLGDNRLTSVPAAIR 233



 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 117/225 (52%), Gaps = 14/225 (6%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L  N L+  P    + T+L  L+L+ N++T LP  +     L  L    N LT  S+P +
Sbjct: 35  LPKNQLTCVPAEIGQLTSLEMLNLNYNQLTSLPAEVGQLTALKELSLYGNQLT--SVPAE 92

Query: 122 MSNLKNLKVFNLSGN-QLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
           +  L +L   NL G  QL   P ++  + +L+ L+L +N L  VP EI +L  L  L L 
Sbjct: 93  IGQLASLTELNLGGGKQLTSVPAEVGQLTSLERLWLHDNRLTSVPAEIGQLASLRELWLN 152

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
            N LT +P   G L  L  L L+DN+L S+PA I  L  L+ L LH N+L ++P EI  L
Sbjct: 153 YNQLTSVPAEIGQLRSLRWLFLNDNRLTSVPADIGQLTSLEGLWLHANQLTSVPAEIGQL 212

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLK---CLSELSLRDNPLVI 282
                 L+ L L +N+L ++P  I  L+   C +EL   DN + +
Sbjct: 213 T----SLEKLYLGDNRLTSVPAAIRELRAAGCHAEL---DNGVTV 250



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/203 (33%), Positives = 95/203 (46%), Gaps = 6/203 (2%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           LP N     P  I  L       L +N L+  P    + T L+ L L  N++T +P  I 
Sbjct: 35  LPKNQLTCVPAEIGQLTSLEMLNLNYNQLTSLPAEVGQLTALKELSLYGNQLTSVPAEIG 94

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T +         S+P ++  L +L+   L  N+L   P +I  + +L+ L+L  N
Sbjct: 95  QLASLTELNLGGGKQLTSVPAEVGQLTSLERLWLHDNRLTSVPAEIGQLASLRELWLNYN 154

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L  VP EI +L  L  L L  N LT +P   G L  LE L L  NQL S+PA I  L  
Sbjct: 155 QLTSVPAEIGQLRSLRWLFLNDNRLTSVPADIGQLTSLEGLWLHANQLTSVPAEIGQLTS 214

Query: 220 LKSLLLHNNKLRTLPTEIITLKC 242
           L+ L L +N+L ++P  I  L+ 
Sbjct: 215 LEKLYLGDNRLTSVPAAIRELRA 237



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 89/165 (53%), Gaps = 5/165 (3%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++P ++  L  ++  +L  NQL   P +I  + +L+ L L  N L  +P E+ +L  L  
Sbjct: 19  AVPAEVWRLSAMRKLSLPKNQLTCVPAEIGQLTSLEMLNLNYNQLTSLPAEVGQLTALKE 78

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDN-QLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           LSL GN LT +P   G L  L  L L    QL S+PA +  L  L+ L LH+N+L ++P 
Sbjct: 79  LSLYGNQLTSVPAEIGQLASLTELNLGGGKQLTSVPAEVGQLTSLERLWLHDNRLTSVPA 138

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI  L  L E    L L+ N+L ++P EI  L+ L  L L DN L
Sbjct: 139 EIGQLASLRE----LWLNYNQLTSVPAEIGQLRSLRWLFLNDNRL 179


>gi|428181668|gb|EKX50531.1| hypothetical protein GUITHDRAFT_66992 [Guillardia theta CCMP2712]
          Length = 614

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 96/274 (35%), Positives = 134/274 (48%), Gaps = 44/274 (16%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTL----IARNN 111
           E +  L L  N L+  P     FT +  L L  NRI  LP+ I    L++L    +A N 
Sbjct: 249 EKLKELWLSDNRLTSMPVVIEAFTQIEVLKLVGNRIEELPKQIGT--LTSLKELHLAWNQ 306

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREIN-- 169
           L T   LP ++ NL NL+   LS N+L++ P++I ++ +L YL +G N L  +P EI   
Sbjct: 307 LTT---LPVEIGNLANLEKMLLSHNRLQRIPVEIQNLTSLTYLNVGKNRLPSLPNEIGDL 363

Query: 170 ---------------------KLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLE 208
                                +L KL +L    N LT +PD+ G+L  L  L L+ N LE
Sbjct: 364 DNLEEFRTHHNQIQAIPSSIGRLLKLKILDASENQLTTLPDSIGELTSLAHLDLAVNNLE 423

Query: 209 SLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLK 268
           +LP +I NL  LK LLL+ NKL  LP  +  L      L++L L  N+L +LP  +  LK
Sbjct: 424 ALPGTIGNLTALKKLLLYRNKLTILPLTVGKLT----NLETLDLQTNRLTSLPPGVGNLK 479

Query: 269 CLSELSLRDNPLVIRFVSDMTYKPPSLLELASRT 302
            L + +L  N LV          PPS+  L S T
Sbjct: 480 NLMKFNLIQNALV--------KLPPSIGSLESLT 505



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/192 (35%), Positives = 87/192 (45%), Gaps = 39/192 (20%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPK 120
           LLLY N L+  P    K TNL +LDL  NR+T                        SLP 
Sbjct: 438 LLLYRNKLTILPLTVGKLTNLETLDLQTNRLT------------------------SLPP 473

Query: 121 DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
            + NLKNL  FNL  N L + P  I  + +L  L L  N L  +P  +N L  L +LSL 
Sbjct: 474 GVGNLKNLMKFNLIQNALVKLPPSIGSLESLTQLSLRENQLAILPASMNMLFNLQILSLS 533

Query: 181 GNSLTDIPDTFGDLY---------------QLEALILSDNQLESLPASISNLKMLKSLLL 225
            N L ++P    DL                 L+ L +SDN LE+LP  I N + L  L +
Sbjct: 534 ANRLYELPPLIEDLTTLQVCQDLPQKSLTPSLQVLTISDNALETLPVKIGNFRALTQLAV 593

Query: 226 HNNKLRTLPTEI 237
            NN+L+ LP  I
Sbjct: 594 SNNQLKELPATI 605



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 115/242 (47%), Gaps = 16/242 (6%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ +LL HN L   P      T+L  L++  NR+  LP  I +   L      +N + A
Sbjct: 319 NLEKMLLSHNRLQRIPVEIQNLTSLTYLNVGKNRLPSLPNEIGDLDNLEEFRTHHNQIQA 378

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P  +  L  LK+ + S NQL   P  I ++ +L +L L  N+L  +P  I  L  L 
Sbjct: 379 --IPSSIGRLLKLKILDASENQLTTLPDSIGELTSLAHLDLAVNNLEALPGTIGNLTALK 436

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +P T G L  LE L L  N+L SLP  + NLK L    L  N L  LP 
Sbjct: 437 KLLLYRNKLTILPLTVGKLTNLETLDLQTNRLTSLPPGVGNLKNLMKFNLIQNALVKLPP 496

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
            I +L+ L++    L L  N+L  LP  +  L  L  LSL  N L         Y+ P L
Sbjct: 497 SIGSLESLTQ----LSLRENQLAILPASMNMLFNLQILSLSANRL---------YELPPL 543

Query: 296 LE 297
           +E
Sbjct: 544 IE 545



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 90/282 (31%), Positives = 124/282 (43%), Gaps = 52/282 (18%)

Query: 57  NIDTLLLYHNNL-----------------------SFFPDNASKFTNLRSLDLSNNRITH 93
           N+  L L+ NNL                       S  P    K  NLR L +S N  T 
Sbjct: 68  NLTQLKLFKNNLTNLPSAIGGLLKLTSLSVIDNKISVLPPEMGKLLNLRKLRISYNDFTK 127

Query: 94  LPQAITNF-PLSTLIARNNLLT-----------------AESLPKDMSNLKNLKVFNLSG 135
           L   I     L +L A NN +T                  ESLP +M ++ +L    L  
Sbjct: 128 LTPVIGQMTKLESLKADNNSITHLIPEFGKLDLRLSNNQLESLPTEMGSMTSLTQLKLPF 187

Query: 136 NQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS--LTDIPDTFGD 193
           N L+  P +I D+  L  L L NNSL  +P E+ KL +L  L L  N   +  +P   G 
Sbjct: 188 NLLKTVPKEIGDLENLIELTLQNNSLERIPMELGKLSQLEALMLDHNKDLINSLPANIGR 247

Query: 194 LYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLH 253
             +L+ L LSDN+L S+P  I     ++ L L  N++  LP +I TL  L E    L L 
Sbjct: 248 CEKLKELWLSDNRLTSMPVVIEAFTQIEVLKLVGNRIEELPKQIGTLTSLKE----LHLA 303

Query: 254 NNKLRTLPTEIITLKCLSELSLRDN-----PLVIRFVSDMTY 290
            N+L TLP EI  L  L ++ L  N     P+ I+ ++ +TY
Sbjct: 304 WNQLTTLPVEIGNLANLEKMLLSHNRLQRIPVEIQNLTSLTY 345



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 85/279 (30%), Positives = 125/279 (44%), Gaps = 15/279 (5%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           SI  L   +  LD      Q+E LP    +    ++  L L  N L   P       NL 
Sbjct: 147 SITHLIPEFGKLDLRLSNNQLESLPTEMGSMT--SLTQLKLPFNLLKTVPKEIGDLENLI 204

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
            L L NN +  +P  +     L  L+  +N     SLP ++   + LK   LS N+L   
Sbjct: 205 ELTLQNNSLERIPMELGKLSQLEALMLDHNKDLINSLPANIGRCEKLKELWLSDNRLTSM 264

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P+ I     ++ L L  N +  +P++I  L  L  L L  N LT +P   G+L  LE ++
Sbjct: 265 PVVIEAFTQIEVLKLVGNRIEELPKQIGTLTSLKELHLAWNQLTTLPVEIGNLANLEKML 324

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           LS N+L+ +P  I NL  L  L +  N+L +LP EI  L  L E       H+N+++ +P
Sbjct: 325 LSHNRLQRIPVEIQNLTSLTYLNVGKNRLPSLPNEIGDLDNLEE----FRTHHNQIQAIP 380

Query: 262 TEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELAS 300
           + I  L  L  L   +N         +T  P S+ EL S
Sbjct: 381 SSIGRLLKLKILDASEN--------QLTTLPDSIGELTS 411



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 105/217 (48%), Gaps = 15/217 (6%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMS 123
            N L+  PD+  + T+L  LDL+ N +  LP  I N   L  L+   N LT   LP  + 
Sbjct: 396 ENQLTTLPDSIGELTSLAHLDLAVNNLEALPGTIGNLTALKKLLLYRNKLTI--LPLTVG 453

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            L NL+  +L  N+L   P  + ++  L    L  N+L  +P  I  L  L  LSL  N 
Sbjct: 454 KLTNLETLDLQTNRLTSLPPGVGNLKNLMKFNLIQNALVKLPPSIGSLESLTQLSLRENQ 513

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           L  +P +   L+ L+ L LS N+L  LP  I +L  L+         + LP      K L
Sbjct: 514 LAILPASMNMLFNLQILSLSANRLYELPPLIEDLTTLQV-------CQDLPQ-----KSL 561

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +  L+ L + +N L TLP +I   + L++L++ +N L
Sbjct: 562 TPSLQVLTISDNALETLPVKIGNFRALTQLAVSNNQL 598



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/169 (31%), Positives = 82/169 (48%), Gaps = 23/169 (13%)

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            +LS N L   PI+++ +  L  L L  N+L ++P  I  L KL  LS+  N ++ +P  
Sbjct: 49  LDLSCNGLTFVPIEVVRMTNLTQLKLFKNNLTNLPSAIGGLLKLTSLSVIDNKISVLPPE 108

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLL-------------------HNNKLR 231
            G L  L  L +S N    L   I  +  L+SL                      NN+L 
Sbjct: 109 MGKLLNLRKLRISYNDFTKLTPVIGQMTKLESLKADNNSITHLIPEFGKLDLRLSNNQLE 168

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +LPTE+ ++  L++    L L  N L+T+P EI  L+ L EL+L++N L
Sbjct: 169 SLPTEMGSMTSLTQ----LKLPFNLLKTVPKEIGDLENLIELTLQNNSL 213


>gi|456874712|gb|EMF89984.1| leucine rich repeat protein [Leptospira santarosai str. ST188]
          Length = 269

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 83/205 (40%), Positives = 115/205 (56%), Gaps = 9/205 (4%)

Query: 80  NLRSLDLSNNRITHLPQAI--TNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++R L LS   +  LP+ I          +++N L T   LPK++  LK L+  +LS NQ
Sbjct: 51  DVRILGLSGRELATLPKEIGQLQNLQLLDLSKNQLAT---LPKEIGQLKKLQTLHLSENQ 107

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           L   P +I  +  L+ L L +N L  +P+EI +L  L  L+L GN LT +P   G L  L
Sbjct: 108 LTTLPKEIEQLKKLQTLDLNHNKLTTLPKEIGQLQNLQELNLNGNQLTTLPKEIGQLKNL 167

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
             L L+ NQL +LP  I  L+ L+SL L++N+L TLP EI  L+ L E    L L  N+L
Sbjct: 168 YRLELNSNQLATLPKEIGQLQKLQSLGLYSNQLTTLPKEIGKLQNLQE----LDLSENQL 223

Query: 258 RTLPTEIITLKCLSELSLRDNPLVI 282
            TLP EI  LK L  LSL++N  +I
Sbjct: 224 TTLPKEIEQLKNLRWLSLKNNTALI 248


>gi|456972990|gb|EMG13268.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 379

 Score =  111 bits (278), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 87/226 (38%), Positives = 123/226 (54%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L +N L+  P+   +  NL++L+L+NN++  LP+ I     L TL   NN L 
Sbjct: 140 KNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLMTLPEEIGQLKNLQTLNLWNNQLM 199

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +L K +  LKNL+   L+ NQL   P +I  +  L+ L L NN L  + +EI +L  L
Sbjct: 200 --TLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNL 257

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L LG N    IP+    L  L+ L L++NQL +L   I  L+ L+ L L  N+  TLP
Sbjct: 258 KRLDLGYNQFKIIPNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQFTTLP 317

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  LK     L+ L L+NN+L+TL  EI  LK L  L L +N L
Sbjct: 318 EEIGQLK----NLQVLELNNNQLKTLSKEIGQLKNLKRLELDNNQL 359



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 92/255 (36%), Positives = 126/255 (49%), Gaps = 11/255 (4%)

Query: 27  LDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           LD  +  L+ + L T    LP      K  N+  L L  N L  FP    +  NLR L+L
Sbjct: 48  LDVRFLYLNGQKLTT----LPKEIGQLK--NLHDLNLDENPLGAFPKEIGQLENLRVLEL 101

Query: 87  SNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQIL 146
           +NN++   P+ I        +  NN     +L K +  LKNL+   L+ NQL   P +I 
Sbjct: 102 NNNQLKTFPKEIGQLKNLLALYLNNNQLM-TLSKGIGQLKNLQELYLNYNQLTILPNEIG 160

Query: 147 DIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQ 206
            +  L+ L L NN L  +P EI +L  L  L+L  N L  +    G L  L+ L L+ NQ
Sbjct: 161 QLKNLQALELNNNQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYNQ 220

Query: 207 LESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIIT 266
           L  LP  I  LK L++L L+NN+L+TL  EI  LK     LK L L  N+ + +P EI  
Sbjct: 221 LTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLK----NLKRLDLGYNQFKIIPNEIEQ 276

Query: 267 LKCLSELSLRDNPLV 281
           L+ L  L L +N L 
Sbjct: 277 LQNLQVLELNNNQLT 291



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 111/227 (48%), Gaps = 30/227 (13%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           ++R L L+  ++T LP+ I     L  L    N L A   PK++  L+NL+V  L+ NQL
Sbjct: 49  DVRFLYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGA--FPKEIGQLENLRVLELNNNQL 106

Query: 139 EQFPIQILD-----------------------IPTLKYLYLGNNSLNHVPREINKLCKLH 175
           + FP +I                         +  L+ LYL  N L  +P EI +L  L 
Sbjct: 107 KTFPKEIGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQ 166

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L  +P+  G L  L+ L L +NQL +L   I  LK L+ L L+ N+L  LP 
Sbjct: 167 ALELNNNQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYNQLTILPN 226

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           EI  LK     L++L L+NN+L+TL  EI  LK L  L L  N   I
Sbjct: 227 EIGQLK----NLQALELNNNQLKTLSKEIGQLKNLKRLDLGYNQFKI 269



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 4/97 (4%)

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           IN  CK+    +   +  D+ +   +   +  L L+  +L +LP  I  LK L  L L  
Sbjct: 21  INLFCKIQTEKVEPKTYRDLTEAIQNPLDVRFLYLNGQKLTTLPKEIGQLKNLHDLNLDE 80

Query: 228 NKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           N L   P EI  L    E L+ L L+NN+L+T P EI
Sbjct: 81  NPLGAFPKEIGQL----ENLRVLELNNNQLKTFPKEI 113


>gi|323453411|gb|EGB09283.1| hypothetical protein AURANDRAFT_24947, partial [Aureococcus
           anophagefferens]
          Length = 318

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 116/225 (51%), Gaps = 7/225 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           ++ L+LY+N L+  P++    ++L  L L  N +  LP++  +   L TL   NN L   
Sbjct: 80  LEYLMLYNNALASLPESFGGLSSLVELRLGGNALASLPESFGDLASLVTLYLHNNALA-- 137

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           SLP+    L++L   NL  N L+  P    D+  L  LYL  N+L  +P     L +L  
Sbjct: 138 SLPESFGELESLVTLNLHTNALKSLPESFGDLAILVTLYLHENALASLPESFGDLERLTT 197

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+L  N+L  +P++FGDL  L  L L+DN L SLP S   L+ L+ L L++N L +LP  
Sbjct: 198 LNLYNNALASLPESFGDLASLVTLYLNDNALASLPESFGGLESLEHLDLNDNALASLPES 257

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
              L      L +L L NN L +LP     L  L  L LR+N L 
Sbjct: 258 FGGLA----SLVTLYLRNNALASLPESFGDLSSLVTLELRNNTLT 298



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 79/220 (35%), Positives = 114/220 (51%), Gaps = 7/220 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           LY+N L+  P++     +L +L L++N +  LP++      L  L+  NN L   SLP+ 
Sbjct: 39  LYNNALASLPESFGDLASLVTLFLNDNALASLPESFGGLASLEYLMLYNNALA--SLPES 96

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
              L +L    L GN L   P    D+ +L  LYL NN+L  +P    +L  L  L+L  
Sbjct: 97  FGGLSSLVELRLGGNALASLPESFGDLASLVTLYLHNNALASLPESFGELESLVTLNLHT 156

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N+L  +P++FGDL  L  L L +N L SLP S  +L+ L +L L+NN L +LP     L 
Sbjct: 157 NALKSLPESFGDLAILVTLYLHENALASLPESFGDLERLTTLNLYNNALASLPESFGDLA 216

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                L +L L++N L +LP     L+ L  L L DN L 
Sbjct: 217 ----SLVTLYLNDNALASLPESFGGLESLEHLDLNDNALA 252



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 76/211 (36%), Positives = 108/211 (51%), Gaps = 7/211 (3%)

Query: 72  PDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKV 130
           P++      L +L+L N+ +T LP++      L  L   NN L   SLP+   +L +L  
Sbjct: 2   PESFGGLERLTTLNLGNHALTSLPESFGGLASLVELNLYNNALA--SLPESFGDLASLVT 59

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
             L+ N L   P     + +L+YL L NN+L  +P     L  L  L LGGN+L  +P++
Sbjct: 60  LFLNDNALASLPESFGGLASLEYLMLYNNALASLPESFGGLSSLVELRLGGNALASLPES 119

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
           FGDL  L  L L +N L SLP S   L+ L +L LH N L++LP     L      L +L
Sbjct: 120 FGDLASLVTLYLHNNALASLPESFGELESLVTLNLHTNALKSLPESFGDLAI----LVTL 175

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            LH N L +LP     L+ L+ L+L +N L 
Sbjct: 176 YLHENALASLPESFGDLERLTTLNLYNNALA 206



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 113/227 (49%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E + TL L ++ L+  P++     +L  L+L NN +  LP++  +   L TL   +N L 
Sbjct: 9   ERLTTLNLGNHALTSLPESFGGLASLVELNLYNNALASLPESFGDLASLVTLFLNDNALA 68

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLP+    L +L+   L  N L   P     + +L  L LG N+L  +P     L  L
Sbjct: 69  --SLPESFGGLASLEYLMLYNNALASLPESFGGLSSLVELRLGGNALASLPESFGDLASL 126

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N+L  +P++FG+L  L  L L  N L+SLP S  +L +L +L LH N L +LP
Sbjct: 127 VTLYLHNNALASLPESFGELESLVTLNLHTNALKSLPESFGDLAILVTLYLHENALASLP 186

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                L    E+L +L L+NN L +LP     L  L  L L DN L 
Sbjct: 187 ESFGDL----ERLTTLNLYNNALASLPESFGDLASLVTLYLNDNALA 229



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 106/213 (49%), Gaps = 10/213 (4%)

Query: 39  LATQIEL-LPNNDYNKKPENID------TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRI 91
           L++ +EL L  N     PE+        TL L++N L+  P++  +  +L +L+L  N +
Sbjct: 100 LSSLVELRLGGNALASLPESFGDLASLVTLYLHNNALASLPESFGELESLVTLNLHTNAL 159

Query: 92  THLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPT 150
             LP++  +   L TL    N L   SLP+   +L+ L   NL  N L   P    D+ +
Sbjct: 160 KSLPESFGDLAILVTLYLHENALA--SLPESFGDLERLTTLNLYNNALASLPESFGDLAS 217

Query: 151 LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           L  LYL +N+L  +P     L  L  L L  N+L  +P++FG L  L  L L +N L SL
Sbjct: 218 LVTLYLNDNALASLPESFGGLESLEHLDLNDNALASLPESFGGLASLVTLYLRNNALASL 277

Query: 211 PASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           P S  +L  L +L L NN L +LP     L+ L
Sbjct: 278 PESFGDLSSLVTLELRNNTLTSLPESFGGLESL 310



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 59/163 (36%), Positives = 77/163 (47%), Gaps = 4/163 (2%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LP+    L+ L   NL  + L   P     + +L  L L NN+L  +P     L  L  L
Sbjct: 1   LPESFGGLERLTTLNLGNHALTSLPESFGGLASLVELNLYNNALASLPESFGDLASLVTL 60

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            L  N+L  +P++FG L  LE L+L +N L SLP S   L  L  L L  N L +LP   
Sbjct: 61  FLNDNALASLPESFGGLASLEYLMLYNNALASLPESFGGLSSLVELRLGGNALASLPESF 120

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             L      L +L LHNN L +LP     L+ L  L+L  N L
Sbjct: 121 GDLA----SLVTLYLHNNALASLPESFGELESLVTLNLHTNAL 159



 Score = 59.3 bits (142), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 45/150 (30%), Positives = 70/150 (46%), Gaps = 24/150 (16%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           E + TL LY+N L+  P++     +L +L L++N +                        
Sbjct: 193 ERLTTLNLYNNALASLPESFGDLASLVTLYLNDNALA----------------------- 229

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLP+    L++L+  +L+ N L   P     + +L  LYL NN+L  +P     L  L 
Sbjct: 230 -SLPESFGGLESLEHLDLNDNALASLPESFGGLASLVTLYLRNNALASLPESFGDLSSLV 288

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDN 205
            L L  N+LT +P++FG L  L  L L+DN
Sbjct: 289 TLELRNNTLTSLPESFGGLESLVTLYLNDN 318


>gi|418707285|ref|ZP_13268113.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|421128256|ref|ZP_15588473.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421133246|ref|ZP_15593395.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410022575|gb|EKO89351.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410434268|gb|EKP83407.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|410772424|gb|EKR47610.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 374

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 87/226 (38%), Positives = 123/226 (54%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L +N L+  P+   +  NL++L+L+NN++  LP+ I     L TL   NN L 
Sbjct: 135 KNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLMTLPEEIGQLKNLQTLNLWNNQLM 194

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +L K +  LKNL+   L+ NQL   P +I  +  L+ L L NN L  + +EI +L  L
Sbjct: 195 --TLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNL 252

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L LG N    IP+    L  L+ L L++NQL +L   I  L+ L+ L L  N+  TLP
Sbjct: 253 KRLDLGYNQFKIIPNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQFTTLP 312

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  LK     L+ L L+NN+L+TL  EI  LK L  L L +N L
Sbjct: 313 EEIGQLK----NLQVLELNNNQLKTLSKEIGQLKNLKRLELDNNQL 354



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 92/255 (36%), Positives = 126/255 (49%), Gaps = 11/255 (4%)

Query: 27  LDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           LD  +  L+ + L T    LP      K  N+  L L  N L  FP    +  NLR L+L
Sbjct: 43  LDVRFLYLNGQKLTT----LPKEIGQLK--NLHDLNLDENPLGAFPKEIGQLENLRVLEL 96

Query: 87  SNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQIL 146
           +NN++   P+ I        +  NN     +L K +  LKNL+   L+ NQL   P +I 
Sbjct: 97  NNNQLKTFPKEIGQLKNLLALYLNNNQLM-TLSKGIGQLKNLQELYLNYNQLTILPNEIG 155

Query: 147 DIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQ 206
            +  L+ L L NN L  +P EI +L  L  L+L  N L  +    G L  L+ L L+ NQ
Sbjct: 156 QLKNLQALELNNNQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYNQ 215

Query: 207 LESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIIT 266
           L  LP  I  LK L++L L+NN+L+TL  EI  LK     LK L L  N+ + +P EI  
Sbjct: 216 LTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLK----NLKRLDLGYNQFKIIPNEIEQ 271

Query: 267 LKCLSELSLRDNPLV 281
           L+ L  L L +N L 
Sbjct: 272 LQNLQVLELNNNQLT 286



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 81/227 (35%), Positives = 111/227 (48%), Gaps = 30/227 (13%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           ++R L L+  ++T LP+ I     L  L    N L A   PK++  L+NL+V  L+ NQL
Sbjct: 44  DVRFLYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGA--FPKEIGQLENLRVLELNNNQL 101

Query: 139 EQFPIQILD-----------------------IPTLKYLYLGNNSLNHVPREINKLCKLH 175
           + FP +I                         +  L+ LYL  N L  +P EI +L  L 
Sbjct: 102 KTFPKEIGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQ 161

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L  +P+  G L  L+ L L +NQL +L   I  LK L+ L L+ N+L  LP 
Sbjct: 162 ALELNNNQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYNQLTILPN 221

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           EI  LK     L++L L+NN+L+TL  EI  LK L  L L  N   I
Sbjct: 222 EIGQLK----NLQALELNNNQLKTLSKEIGQLKNLKRLDLGYNQFKI 264



 Score = 43.1 bits (100), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 4/97 (4%)

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           IN  CK+    +   +  D+ +   +   +  L L+  +L +LP  I  LK L  L L  
Sbjct: 16  INLFCKIQTEKVEPKTYRDLTEAIQNPLDVRFLYLNGQKLTTLPKEIGQLKNLHDLNLDE 75

Query: 228 NKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           N L   P EI  L    E L+ L L+NN+L+T P EI
Sbjct: 76  NPLGAFPKEIGQL----ENLRVLELNNNQLKTFPKEI 108


>gi|432117302|gb|ELK37689.1| Malignant fibrous histiocytoma-amplified sequence 1 [Myotis
           davidii]
          Length = 968

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 117/241 (48%), Gaps = 26/241 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA------ 115
           L HN L   P       +L  LD+S NR+ HLP +++    L TL   +N LTA      
Sbjct: 55  LSHNQLPALPAQLGSLAHLEELDVSFNRLAHLPDSLSCLCRLRTLDVDHNQLTAFPGQLL 114

Query: 116 ---------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                            LP+ +S L+ LK+  LSG +L   P    ++ +L+ L L NN 
Sbjct: 115 QLAALEELDVSSNRLRGLPEGISALRALKILWLSGAELGTLPEGFCELASLESLMLDNNR 174

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P + + L +L +L+L  N   + P     L  LE L LS NQL ++P+ IS L  L
Sbjct: 175 LQALPTQFSHLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTAVPSLISGLGRL 234

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DNPL
Sbjct: 235 LTLWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDNFGQLSRVGLWKIKDNPL 290

Query: 281 V 281
           +
Sbjct: 291 I 291



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 86/173 (49%), Gaps = 3/173 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L   P+  S    L+ L LS   +  LP+       L +L+  NN L A  LP   S+
Sbjct: 127 NRLRGLPEGISALRALKILWLSGAELGTLPEGFCELASLESLMLDNNRLQA--LPTQFSH 184

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ LK+ NLS N  E+FP  +L +  L+ LYL  N L  VP  I+ L +L  L L  N +
Sbjct: 185 LQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTAVPSLISGLGRLLTLWLDNNRI 244

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
             +PD+  +L  LE L+L  NQ+  LP +   L  +    + +N L   P E+
Sbjct: 245 RYLPDSIVELTGLEELVLQGNQIAVLPDNFGQLSRVGLWKIKDNPLIQPPYEV 297



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 61/157 (38%), Positives = 83/157 (52%), Gaps = 4/157 (2%)

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +S L  L+  NLS NQL   P Q+  +  L+ L +  N L H+P  ++ LC+L  L +  
Sbjct: 44  VSALHELRKLNLSHNQLPALPAQLGSLAHLEELDVSFNRLAHLPDSLSCLCRLRTLDVDH 103

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N LT  P     L  LE L +S N+L  LP  IS L+ LK L L   +L TLP       
Sbjct: 104 NQLTAFPGQLLQLAALEELDVSSNRLRGLPEGISALRALKILWLSGAELGTLPEGF---- 159

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           C    L+SL+L NN+L+ LPT+   L+ L  L+L  N
Sbjct: 160 CELASLESLMLDNNRLQALPTQFSHLQRLKMLNLSSN 196



 Score = 39.3 bits (90), Expect = 3.6,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 42/73 (57%), Gaps = 4/73 (5%)

Query: 189 DTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLK 248
           D    L++L  L LS NQL +LPA + +L  L+ L +  N+L  LP    +L CL  +L+
Sbjct: 42  DVVSALHELRKLNLSHNQLPALPAQLGSLAHLEELDVSFNRLAHLPD---SLSCLC-RLR 97

Query: 249 SLLLHNNKLRTLP 261
           +L + +N+L   P
Sbjct: 98  TLDVDHNQLTAFP 110


>gi|45656982|ref|YP_001068.1| hypothetical protein LIC11098 [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|421087184|ref|ZP_15548025.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421104950|ref|ZP_15565543.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45600219|gb|AAS69705.1| conserved hypothetical protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|410365260|gb|EKP20655.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410430293|gb|EKP74663.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|456983450|gb|EMG19759.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 426

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 92/256 (35%), Positives = 129/256 (50%), Gaps = 36/256 (14%)

Query: 55  PENID------TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLI 107
           PE+I+      TL L HN  +       +  NL SL L +N++  LP+ I     L +L 
Sbjct: 157 PEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPKEIGQLRNLESLG 216

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF-----------------------PIQ 144
             +N L    LPK++  L+NL++ +L  NQL                          P +
Sbjct: 217 LDHNQLNV--LPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTTLPKE 274

Query: 145 ILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD 204
           I  +  L+ L L  N L  +P+EI +L  L  L L GN LT +P+  G L +L+ L L +
Sbjct: 275 IGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQTLYLGN 334

Query: 205 NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           NQL  LP  I  L+ L+SL L +N+L  LP EI  L    +KL++L L  N+L TLP EI
Sbjct: 335 NQLNFLPKEIGQLRNLESLDLEHNQLNALPKEIGKL----QKLQTLNLKYNQLATLPEEI 390

Query: 265 ITLKCLSELSLRDNPL 280
             LK L +L L +NPL
Sbjct: 391 KQLKNLKKLYLHNNPL 406



 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 88/231 (38%), Positives = 115/231 (49%), Gaps = 22/231 (9%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLK 129
            P    K  NL+ L LS N++  LP+ I     L  L    N LTA  +PK++  L+NL+
Sbjct: 87  LPKEIGKLQNLQQLHLSKNQLMALPEEIGQLQNLQKLKLYENQLTA--IPKEIGQLQNLQ 144

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
             NL+ NQL   P  I  +  L+ LYLG+N  N + +EI +L  L  L L  N L  +P 
Sbjct: 145 ELNLAHNQLATLPEDIEQLQRLQTLYLGHNQFNSILKEIGQLQNLESLGLDHNQLNVLPK 204

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS----- 244
             G L  LE+L L  NQL  LP  I  L+ L+ L L NN+L TLP EI  L+ L      
Sbjct: 205 EIGQLRNLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLN 264

Query: 245 --------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                         + L+ L L+ N+L TLP EI  L+ L EL L  N L 
Sbjct: 265 KNKLTTLPKEIGQLQNLQKLKLYENQLTTLPKEIGQLQNLQELDLDGNQLT 315



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 78/207 (37%), Positives = 103/207 (49%), Gaps = 29/207 (14%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-------------- 102
           N+++L L HN L+  P    +  NL+ L L NN++T LP+ I                  
Sbjct: 211 NLESLGLDHNQLNVLPKEIGQLQNLQILHLRNNQLTTLPKEIGQLQNLQKLLLNKNKLTT 270

Query: 103 ----------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                     L  L    N LT  +LPK++  L+NL+  +L GNQL   P  I  +  L+
Sbjct: 271 LPKEIGQLQNLQKLKLYENQLT--TLPKEIGQLQNLQELDLDGNQLTTLPENIGQLQRLQ 328

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LYLGNN LN +P+EI +L  L  L L  N L  +P   G L +L+ L L  NQL +LP 
Sbjct: 329 TLYLGNNQLNFLPKEIGQLRNLESLDLEHNQLNALPKEIGKLQKLQTLNLKYNQLATLPE 388

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIIT 239
            I  LK LK L LHNN    LP+E I 
Sbjct: 389 EIKQLKNLKKLYLHNN---PLPSEKIA 412



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 62/182 (34%), Positives = 91/182 (50%), Gaps = 27/182 (14%)

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQI----------------LDIP-------TLKYLYLGN 158
           + N +N+++ NLSG++L   P +I                + +P        L+ L+L  
Sbjct: 45  LKNPQNVRILNLSGSKLTTLPGEIGKLQNLQLLNLDDNQLIALPKEIGKLQNLQQLHLSK 104

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P EI +L  L  L L  N LT IP   G L  L+ L L+ NQL +LP  I  L+
Sbjct: 105 NQLMALPEEIGQLQNLQKLKLYENQLTAIPKEIGQLQNLQELNLAHNQLATLPEDIEQLQ 164

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L++L L +N+  ++  EI  L    + L+SL L +N+L  LP EI  L+ L  L L  N
Sbjct: 165 RLQTLYLGHNQFNSILKEIGQL----QNLESLGLDHNQLNVLPKEIGQLRNLESLGLDHN 220

Query: 279 PL 280
            L
Sbjct: 221 QL 222


>gi|380015498|ref|XP_003691738.1| PREDICTED: LOW QUALITY PROTEIN: protein lap4-like [Apis florea]
          Length = 2046

 Score =  111 bits (278), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 79/224 (35%), Positives = 120/224 (53%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLT 114
           +++ LLL  N++   P N  +   LR L LS+N I  LP  I NF   +   ++RN++  
Sbjct: 38  SLEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDI-- 95

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+++ NL+ L+V + S N + + P   + +  L  L L + SL ++P +   L  L
Sbjct: 96  -PDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEAL 154

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P++   LY+LE L L DN +E LPA I  L  L+ L L +N+L+ LP
Sbjct: 155 QSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGELPALQELWLDHNQLQHLP 214

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK L      L +  N+L  LP EI  L+ L++L L  N
Sbjct: 215 PEIGELKTLV----CLDVSENRLEDLPEEIGGLESLTDLHLSQN 254



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 90/272 (33%), Positives = 124/272 (45%), Gaps = 53/272 (19%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQA----------------IT 99
           EN+  L +  N++   P+N      L+  D S+N I  LP                  +T
Sbjct: 83  ENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLT 142

Query: 100 NFP--------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
           N P        L +L  R NLL  +SLP+ +S L  L+  +L  N +E  P  I ++P L
Sbjct: 143 NLPPDFGSLEALQSLELRENLL--KSLPESLSQLYKLERLDLGDNDIEVLPAHIGELPAL 200

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           + L+L +N L H+P EI +L  L  L +  N L D+P+  G L  L  L LS N +E LP
Sbjct: 201 QELWLDHNQLQHLPPEIGELKTLVCLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLP 260

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLL------------------- 252
             +  LK L  L +  N+L TL   I   +C  E L+ L+L                   
Sbjct: 261 DGLGELKKLTILKVDQNRLSTLNPNI--GRC--ENLQELILTENFLLELPVSIGKLLNLN 316

Query: 253 ----HNNKLRTLPTEIITLKCLSELSLRDNPL 280
                 N L++LPTE   LK L  LSLRDN L
Sbjct: 317 NLNVDRNSLQSLPTETGNLKQLGVLSLRDNKL 348



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 115/226 (50%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E + +L L  N L   P++ S+   L  LDL +N I  LP  I   P L  L   +N L 
Sbjct: 152 EALQSLELRENLLKSLPESLSQLYKLERLDLGDNDIEVLPAHIGELPALQELWLDHNQL- 210

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            + LP ++  LK L   ++S N+LE  P +I  + +L  L+L  N +  +P  + +L KL
Sbjct: 211 -QHLPPEIGELKTLVCLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELKKL 269

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L +  N L+ +    G    L+ LIL++N L  LP SI  L  L +L +  N L++LP
Sbjct: 270 TILKVDQNRLSTLNPNIGRCENLQELILTENFLLELPVSIGKLLNLNNLNVDRNSLQSLP 329

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           TE   LK    +L  L L +NKL+ LP E+     L  L +  N L
Sbjct: 330 TETGNLK----QLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRL 371



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 94/186 (50%), Gaps = 27/186 (14%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFP--IQ--------------ILDIPT----LKYLYLG 157
           LPK+   L+ L+   LS N++ + P  IQ              I DIP     L+ L + 
Sbjct: 52  LPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDIPENIKNLRALQVA 111

Query: 158 NNSLNHVPR---EINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASI 214
           + S N +PR      +L  L VL L   SLT++P  FG L  L++L L +N L+SLP S+
Sbjct: 112 DFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENLLKSLPESL 171

Query: 215 SNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           S L  L+ L L +N +  LP  I  L  L E    L L +N+L+ LP EI  LK L  L 
Sbjct: 172 SQLYKLERLDLGDNDIEVLPAHIGELPALQE----LWLDHNQLQHLPPEIGELKTLVCLD 227

Query: 275 LRDNPL 280
           + +N L
Sbjct: 228 VSENRL 233



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 86/197 (43%), Gaps = 27/197 (13%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L HN L   P    +   L  LD+S NR+  LP+ I     L+ L    N++  E LP
Sbjct: 203 LWLDHNQLQHLPPEIGELKTLVCLDVSENRLEDLPEEIGGLESLTDLHLSQNVI--EKLP 260

Query: 120 KDMSNLKNLKVFNLSGNQLE-----------------------QFPIQILDIPTLKYLYL 156
             +  LK L +  +  N+L                        + P+ I  +  L  L +
Sbjct: 261 DGLGELKKLTILKVDQNRLSTLNPNIGRCENLQELILTENFLLELPVSIGKLLNLNNLNV 320

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
             NSL  +P E   L +L VLSL  N L  +P   G    L  L +S N+L+ LP S+ N
Sbjct: 321 DRNSLQSLPTETGNLKQLGVLSLRDNKLQYLPIEVGQCTALHVLDVSGNRLQYLPYSLIN 380

Query: 217 LKMLKSLLLHNNKLRTL 233
           L  LK++ L  N+ + +
Sbjct: 381 LN-LKAVWLSKNQAQPM 396



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 15/192 (7%)

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           ++L+   L  N +   P     +  L+ L L +N ++ +P +I     L  L +  N + 
Sbjct: 37  RSLEELLLDANHIRDLPKNFFRLQKLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIP 96

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           DIP+   +L  L+    S N +  LPA    L+ L  L L++  L  LP +  +L    E
Sbjct: 97  DIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSL----E 152

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKV 305
            L+SL L  N L++LP  +  L  L  L L DN        D+   P  + EL +  L+ 
Sbjct: 153 ALQSLELRENLLKSLPESLSQLYKLERLDLGDN--------DIEVLPAHIGELPA--LQE 202

Query: 306 HEIDYSQ-EHLP 316
             +D++Q +HLP
Sbjct: 203 LWLDHNQLQHLP 214


>gi|20091139|ref|NP_617214.1| hypothetical protein MA2301 [Methanosarcina acetivorans C2A]
 gi|19916243|gb|AAM05694.1| hypothetical protein MA_2301 [Methanosarcina acetivorans C2A]
          Length = 631

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 90/228 (39%), Positives = 124/228 (54%), Gaps = 9/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTL--IARNNLL 113
           +N+ TL L  N L+  P    +  +L S DLS N++T LP  I      T+  + RN L+
Sbjct: 39  KNLTTLNLSGNQLTQLPSEIGELKSLTSFDLSVNQLTQLPPEIGELKNLTILNVYRNQLI 98

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
             + LP +++ LKNL   +LS N+L Q P +I ++  LK LY  +N L  +P EI KL  
Sbjct: 99  --QLLP-EITELKNLTTLDLSLNKLTQLPPEIGELNNLKTLYSSSNQLTQLPLEITKLKN 155

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N +  +P    +L  L  L +  NQL  LP+ I+ LK LK L L  N+L  L
Sbjct: 156 LTELYLSSNLMIRLPLEITELKNLTTLNVYRNQLIQLPSKITELKNLKKLDLSRNQLAQL 215

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  LK L+    +L L  N+L  LP EI  LK L+ L L +NPL+
Sbjct: 216 PPEIAELKNLT----TLDLSRNQLAQLPPEIAELKNLTTLDLFENPLI 259



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/239 (38%), Positives = 124/239 (51%), Gaps = 19/239 (7%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           NL +LDLS N++T LP  IT    L+TL    N LT   LP ++  LK+L  F+LS NQL
Sbjct: 17  NLTTLDLSENQLTQLPSEITELKNLTTLNLSGNQLT--QLPSEIGELKSLTSFDLSVNQL 74

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
            Q P +I ++  L  L +  N L  +  EI +L  L  L L  N LT +P   G+L  L+
Sbjct: 75  TQLPPEIGELKNLTILNVYRNQLIQLLPEITELKNLTTLDLSLNKLTQLPPEIGELNNLK 134

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L  S NQL  LP  I+ LK L  L L +N +  LP EI  LK L+    +L ++ N+L 
Sbjct: 135 TLYSSSNQLTQLPLEITKLKNLTELYLSSNLMIRLPLEITELKNLT----TLNVYRNQLI 190

Query: 259 TLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQ 317
            LP++I  LK L +L L  N L           PP + EL + T     +D S+  L Q
Sbjct: 191 QLPSKITELKNLKKLDLSRNQLA--------QLPPEIAELKNLT----TLDLSRNQLAQ 237


>gi|124006408|ref|ZP_01691242.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123988065|gb|EAY27736.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 399

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 90/249 (36%), Positives = 133/249 (53%), Gaps = 24/249 (9%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNN 111
           K + +  L L HN+L+  P++  +  +L  L L +N++T LP++I     L  L +  N+
Sbjct: 90  KLKKLHELWLNHNHLTKLPESIGELDHLEDLWLDHNQLTVLPESIGKLEHLGILNLGHND 149

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
           L+    LP+ +S L+NLK   L+ N+L   P  I  +  L+YL   +N L  +P EI +L
Sbjct: 150 LI---ELPESISKLQNLKSLYLNKNKLAVLPESIGLLQNLQYLDAQSNRLQSIPEEIGQL 206

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  LS+ GN L  +P++ G+L  L+ L LS N+L  LPASI+ LK LK L L  NKL 
Sbjct: 207 KNLKYLSVDGNHLAVVPESIGELEHLKELHLSHNRLTFLPASIAQLKTLKDLYLLYNKLT 266

Query: 232 TLPTEIITLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSE 272
            LP     L+ L +                   +LKSL L +N+L +LP  +  L+ L  
Sbjct: 267 GLPPGFGKLQHLKDINLSHNRITTFPIAITKLTQLKSLALDSNQLTSLPANVGNLEQLEV 326

Query: 273 LSLRDNPLV 281
           LSL DN L+
Sbjct: 327 LSLNDNQLI 335



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/251 (37%), Positives = 133/251 (52%), Gaps = 30/251 (11%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K E++  L L HN+L   P++ SK  NL+SL L+ N++  LP++I     L  L A++N 
Sbjct: 136 KLEHLGILNLGHNDLIELPESISKLQNLKSLYLNKNKLAVLPESIGLLQNLQYLDAQSNR 195

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L  +S+P+++  LKNLK  ++ GN L   P  I ++  LK L+L +N L  +P  I +L 
Sbjct: 196 L--QSIPEEIGQLKNLKYLSVDGNHLAVVPESIGELEHLKELHLSHNRLTFLPASIAQLK 253

Query: 173 KLHVLSLGGNSLTDIPDTFGDLY-----------------------QLEALILSDNQLES 209
            L  L L  N LT +P  FG L                        QL++L L  NQL S
Sbjct: 254 TLKDLYLLYNKLTGLPPGFGKLQHLKDINLSHNRITTFPIAITKLTQLKSLALDSNQLTS 313

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           LPA++ NL+ L+ L L++N+L  LP  I  L  L+    +L L NNKL  +P EI  L  
Sbjct: 314 LPANVGNLEQLEVLSLNDNQLIKLPKSIGKLTNLT----TLSLINNKLTDVPIEIQNLPN 369

Query: 270 LSELSLRDNPL 280
           L  L L  NP+
Sbjct: 370 LEYLVLEGNPI 380



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/256 (33%), Positives = 129/256 (50%), Gaps = 17/256 (6%)

Query: 50  DYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIA 108
           D  K PE +  L + +  L+  P    +   L  L +S N+I  LP  I     L  L  
Sbjct: 17  DALKNPEAVHKLNISNQQLTSLPKGIDRLPGLLVLGVSGNKIEVLPSTIDKLQQLEELWF 76

Query: 109 RNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREI 168
            +N L   +LP+ +  LK L    L+ N L + P  I ++  L+ L+L +N L  +P  I
Sbjct: 77  NHNHL--HTLPESIGKLKKLHELWLNHNHLTKLPESIGELDHLEDLWLDHNQLTVLPESI 134

Query: 169 NKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
            KL  L +L+LG N L ++P++   L  L++L L+ N+L  LP SI  L+ L+ L   +N
Sbjct: 135 GKLEHLGILNLGHNDLIELPESISKLQNLKSLYLNKNKLAVLPESIGLLQNLQYLDAQSN 194

Query: 229 KLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDM 288
           +L+++P EI  LK     LK L +  N L  +P  I  L+ L EL L  N L        
Sbjct: 195 RLQSIPEEIGQLK----NLKYLSVDGNHLAVVPESIGELEHLKELHLSHNRL-------- 242

Query: 289 TYKPPSLLELASRTLK 304
           T+ P S+ +L  +TLK
Sbjct: 243 TFLPASIAQL--KTLK 256



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 91/264 (34%), Positives = 129/264 (48%), Gaps = 23/264 (8%)

Query: 70  FFPDNASKFTNLRSL-DLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNL 128
            F   A K+   +S+ D   N     P+A+    +S     N  LT  SLPK +  L  L
Sbjct: 1   MFAAQAQKYKGYKSMKDALKN-----PEAVHKLNIS-----NQQLT--SLPKGIDRLPGL 48

Query: 129 KVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
            V  +SGN++E  P  I  +  L+ L+  +N L+ +P  I KL KLH L L  N LT +P
Sbjct: 49  LVLGVSGNKIEVLPSTIDKLQQLEELWFNHNHLHTLPESIGKLKKLHELWLNHNHLTKLP 108

Query: 189 DTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLK 248
           ++ G+L  LE L L  NQL  LP SI  L+ L  L L +N L  LP  I  L    + LK
Sbjct: 109 ESIGELDHLEDLWLDHNQLTVLPESIGKLEHLGILNLGHNDLIELPESISKL----QNLK 164

Query: 249 SLLLHNNKLRTLPTEIITLKCLSELSLRDN-----PLVIRFVSDMTYKPPSLLELASRTL 303
           SL L+ NKL  LP  I  L+ L  L  + N     P  I  + ++ Y       LA    
Sbjct: 165 SLYLNKNKLAVLPESIGLLQNLQYLDAQSNRLQSIPEEIGQLKNLKYLSVDGNHLAVVPE 224

Query: 304 KVHEIDYSQE-HLPQNLVQYLESA 326
            + E+++ +E HL  N + +L ++
Sbjct: 225 SIGELEHLKELHLSHNRLTFLPAS 248



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 53/128 (41%), Positives = 71/128 (55%), Gaps = 4/128 (3%)

Query: 59  DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAES 117
           D  LLY N L+  P    K  +L+ ++LS+NRIT  P AIT    L +L   +N LT  S
Sbjct: 257 DLYLLY-NKLTGLPPGFGKLQHLKDINLSHNRITTFPIAITKLTQLKSLALDSNQLT--S 313

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LP ++ NL+ L+V +L+ NQL + P  I  +  L  L L NN L  VP EI  L  L  L
Sbjct: 314 LPANVGNLEQLEVLSLNDNQLIKLPKSIGKLTNLTTLSLINNKLTDVPIEIQNLPNLEYL 373

Query: 178 SLGGNSLT 185
            L GN ++
Sbjct: 374 VLEGNPIS 381


>gi|418688970|ref|ZP_13250097.1| leucine rich repeat protein, partial [Leptospira interrogans str.
           FPW2026]
 gi|400361861|gb|EJP17822.1| leucine rich repeat protein, partial [Leptospira interrogans str.
           FPW2026]
          Length = 336

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 87/226 (38%), Positives = 123/226 (54%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L +N L+  P+   +  NL++L+L+NN++  LP+ I     L TL   NN L 
Sbjct: 97  KNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLMTLPEEIGQLKNLQTLNLWNNQLM 156

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +L K +  LKNL+   L+ NQL   P +I  +  L+ L L NN L  + +EI +L  L
Sbjct: 157 --TLSKGIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNL 214

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L LG N    IP+    L  L+ L L++NQL +L   I  L+ L+ L L  N+L  LP
Sbjct: 215 KRLDLGYNQFKIIPNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQLTILP 274

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  LK     L+ L L+NN+L+TL  EI  LK L  L L +N L
Sbjct: 275 NEIGQLK----NLQVLELNNNQLKTLSKEIGQLKNLKRLELNNNQL 316



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 104/305 (34%), Positives = 141/305 (46%), Gaps = 26/305 (8%)

Query: 27  LDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           LD  +  L+ + L T    LP      K  N+  L L  N L  FP    +  NLR L+L
Sbjct: 5   LDVRFLYLNGQKLTT----LPKEIGQLK--NLHDLNLDENPLGAFPKEIGQLENLRVLEL 58

Query: 87  SNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQIL 146
           +NN++   P+ I        +  NN     +L K +  LKNL+   L+ NQL   P +I 
Sbjct: 59  NNNQLKTFPKEIGQLKNLLALYLNNNQLM-TLSKGIGQLKNLQELYLNYNQLTILPNEIG 117

Query: 147 DIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQ 206
            +  L+ L L NN L  +P EI +L  L  L+L  N L  +    G L  L+ L L+ NQ
Sbjct: 118 QLKNLQALELNNNQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKGIGQLKNLQELYLNYNQ 177

Query: 207 LESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS-------------------EKL 247
           L  LP  I  LK L++L L+NN+L+TL  EI  LK L                    + L
Sbjct: 178 LTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLKRLDLGYNQFKIIPNEIEQLQNL 237

Query: 248 KSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHE 307
           + L L+NN+L TL  EI  L+ L EL L  N L I        K   +LEL +  LK   
Sbjct: 238 QVLELNNNQLTTLSKEIGRLQNLQELYLSYNQLTILPNEIGQLKNLQVLELNNNQLKTLS 297

Query: 308 IDYSQ 312
            +  Q
Sbjct: 298 KEIGQ 302


>gi|124007624|ref|ZP_01692328.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
 gi|123986922|gb|EAY26687.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
          Length = 440

 Score =  111 bits (277), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 100/291 (34%), Positives = 136/291 (46%), Gaps = 18/291 (6%)

Query: 1   MSYNYGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPE---- 56
           + YNY +       +    K + +   D          L + I+L  N  YN+  E    
Sbjct: 140 LGYNYLTQLPGSVGNLTQLKVLEVHNNDLFRLPSTIGKLTSLIKL--NLSYNQLSELSKM 197

Query: 57  -----NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARN 110
                N+  L L HN LS  P    + T L+ L LS N +  LP  I     L  L    
Sbjct: 198 TENLVNLQQLNLQHNQLSQLPMAIGQLTALQKLVLSGNNMNVLPANIEQLTSLKHLSLGG 257

Query: 111 NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
           N  T E LP  +  LK+L    L  N L+Q PI+I  +  L+ L L  N L  +P EI +
Sbjct: 258 N--TLEQLPPTICKLKSLTELFLDYNYLQQLPIEIKYLKHLQKLELSYNELKELPAEIGQ 315

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L +L  L+LG N LT +P   G L  LE L +  N+L ++P ++  L  L+  +L NN+L
Sbjct: 316 LTQLKQLNLGQNLLTKLPPEIGQLNCLENLWVYQNKLTNIPPTVGQLTALQRFMLSNNQL 375

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            +LP EI  L  LS    +L L NN+L TLP EI  L  L  L L  NP+ 
Sbjct: 376 TSLPIEIGHLSHLS----TLSLENNQLATLPLEIKQLSKLKSLQLTGNPMA 422



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 85/238 (35%), Positives = 106/238 (44%), Gaps = 30/238 (12%)

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP------------------------ 102
           NL   PD  ++   L+ LDLSNN I HL Q I                            
Sbjct: 75  NLDRLPDEVTQLVTLQQLDLSNNNIEHLSQKIRQLKQLKKLDLQGNELAQLPPIVEQLTG 134

Query: 103 LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLN 162
           L  LI   N LT   LP  + NL  LKV  +  N L + P  I  + +L  L L  N L+
Sbjct: 135 LEELILGYNYLT--QLPGSVGNLTQLKVLEVHNNDLFRLPSTIGKLTSLIKLNLSYNQLS 192

Query: 163 HVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKS 222
            + +    L  L  L+L  N L+ +P   G L  L+ L+LS N +  LPA+I  L  LK 
Sbjct: 193 ELSKMTENLVNLQQLNLQHNQLSQLPMAIGQLTALQKLVLSGNNMNVLPANIEQLTSLKH 252

Query: 223 LLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L L  N L  LP  I  LK L+E    L L  N L+ LP EI  LK L +L L  N L
Sbjct: 253 LSLGGNTLEQLPPTICKLKSLTE----LFLDYNYLQQLPIEIKYLKHLQKLELSYNEL 306



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 142/318 (44%), Gaps = 49/318 (15%)

Query: 7   SSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHN 66
           S  + D    +  + V+++ LD S +++  E L+ +I  L      K+ + +D   L  N
Sbjct: 72  SDKNLDRLPDEVTQLVTLQQLDLSNNNI--EHLSQKIRQL------KQLKKLD---LQGN 120

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNL 125
            L+  P    + T L  L L  N +T LP ++ N   L  L   NN L    LP  +  L
Sbjct: 121 ELAQLPPIVEQLTGLEELILGYNYLTQLPGSVGNLTQLKVLEVHNNDLF--RLPSTIGKL 178

Query: 126 KNLKVFNLSGN-----------------------QLEQFPIQILDIPTLKYLYLGNNSLN 162
            +L   NLS N                       QL Q P+ I  +  L+ L L  N++N
Sbjct: 179 TSLIKLNLSYNQLSELSKMTENLVNLQQLNLQHNQLSQLPMAIGQLTALQKLVLSGNNMN 238

Query: 163 HVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKS 222
            +P  I +L  L  LSLGGN+L  +P T   L  L  L L  N L+ LP  I  LK L+ 
Sbjct: 239 VLPANIEQLTSLKHLSLGGNTLEQLPPTICKLKSLTELFLDYNYLQQLPIEIKYLKHLQK 298

Query: 223 LLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           L L  N+L+ LP EI  L     +LK L L  N L  LP EI  L CL  L +  N L  
Sbjct: 299 LELSYNELKELPAEIGQLT----QLKQLNLGQNLLTKLPPEIGQLNCLENLWVYQNKL-- 352

Query: 283 RFVSDMTYKPPSLLELAS 300
                 T  PP++ +L +
Sbjct: 353 ------TNIPPTVGQLTA 364



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/172 (34%), Positives = 83/172 (48%), Gaps = 19/172 (11%)

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           + L   +LS   L++ P ++  + TL+ L L NN++ H+ ++I +L +L  L L GN L 
Sbjct: 64  QTLIACDLSDKNLDRLPDEVTQLVTLQQLDLSNNNIEHLSQKIRQLKQLKKLDLQGNELA 123

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
            +P     L  LE LIL  N L  LP S+ NL  LK L +HNN L  LP+ I  L  L +
Sbjct: 124 QLPPIVEQLTGLEELILGYNYLTQLPGSVGNLTQLKVLEVHNNDLFRLPSTIGKLTSLIK 183

Query: 246 -------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
                               L+ L L +N+L  LP  I  L  L +L L  N
Sbjct: 184 LNLSYNQLSELSKMTENLVNLQQLNLQHNQLSQLPMAIGQLTALQKLVLSGN 235



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 3/88 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           ++ L +Y N L+  P    + T L+   LSNN++T LP  I +   LSTL   NN L   
Sbjct: 342 LENLWVYQNKLTNIPPTVGQLTALQRFMLSNNQLTSLPIEIGHLSHLSTLSLENNQLA-- 399

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQ 144
           +LP ++  L  LK   L+GN + Q  I+
Sbjct: 400 TLPLEIKQLSKLKSLQLTGNPMAQSEIE 427


>gi|436836854|ref|YP_007322070.1| Protein LAP2 Erbb2-interacting protein [Fibrella aestuarina BUZ 2]
 gi|384068267|emb|CCH01477.1| Protein LAP2 Erbb2-interacting protein [Fibrella aestuarina BUZ 2]
          Length = 801

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 84/252 (33%), Positives = 121/252 (48%), Gaps = 39/252 (15%)

Query: 55  PENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLI 107
           PE++D L       L  N L   P    + T LR L L    +T LP  +     L+ L 
Sbjct: 358 PESLDNLTRLEELHLDRNPLQTLPALVGRLTRLRQLSLDRCELTELPATLGQLGQLTYLT 417

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLS-----------------------GNQLEQFPIQ 144
           A  N LT   LP+ +  L+ L+  N+S                        NQL +FP++
Sbjct: 418 ATQNHLT--RLPESLGQLRQLRDLNVSMNDLTDLPGSLRQLPALERLAAFTNQLTRFPVE 475

Query: 145 ILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD 204
           +  +   ++LYL +N L +VP  + +L +L  L+L GN LT +P+T G L  LE L L D
Sbjct: 476 LAQV---RHLYLSDNQLTNVPDAVGELRRLRSLTLAGNPLTSLPETIGQLDSLEMLTLGD 532

Query: 205 NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           NQL +LP  I  L  L  L L NN+LR LP  I +L  L+    ++++ NN L  LP  +
Sbjct: 533 NQLTALPQRIGQLSRLSWLELGNNRLRELPESIGSLTSLT----AVVIGNNPLEILPASV 588

Query: 265 ITLKCLSELSLR 276
              + L   SL+
Sbjct: 589 GGWQRLRTASLQ 600



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/236 (30%), Positives = 120/236 (50%), Gaps = 23/236 (9%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA-------- 115
            N+L+  P++  +   LR L++S N +T LP ++   P L  L A  N LT         
Sbjct: 420 QNHLTRLPESLGQLRQLRDLNVSMNDLTDLPGSLRQLPALERLAAFTNQLTRFPVELAQV 479

Query: 116 ----------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                      ++P  +  L+ L+   L+GN L   P  I  + +L+ L LG+N L  +P
Sbjct: 480 RHLYLSDNQLTNVPDAVGELRRLRSLTLAGNPLTSLPETIGQLDSLEMLTLGDNQLTALP 539

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
           + I +L +L  L LG N L ++P++ G L  L A+++ +N LE LPAS+   + L++  L
Sbjct: 540 QRIGQLSRLSWLELGNNRLRELPESIGSLTSLTAVVIGNNPLEILPASVGGWQRLRTASL 599

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
               LR LP +I       ++L+ L + +++L  LP  +   + L+ L+L  N L+
Sbjct: 600 QLPYLRRLPDQIGNW----QQLEDLTIESDQLVLLPDALTDCRSLTVLTLSGNKLI 651



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 107/225 (47%), Gaps = 9/225 (4%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L  N L+  PD   +   LRSL L+ N +T LP+ I     L  L   +N LTA  LP
Sbjct: 482 LYLSDNQLTNVPDAVGELRRLRSLTLAGNPLTSLPETIGQLDSLEMLTLGDNQLTA--LP 539

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
           + +  L  L    L  N+L + P  I  + +L  + +GNN L  +P  +    +L   SL
Sbjct: 540 QRIGQLSRLSWLELGNNRLRELPESIGSLTSLTAVVIGNNPLEILPASVGGWQRLRTASL 599

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
               L  +PD  G+  QLE L +  +QL  LP ++++ + L  L L  NKL  LP  +  
Sbjct: 600 QLPYLRRLPDQIGNWQQLEDLTIESDQLVLLPDALTDCRSLTVLTLSGNKLIGLPERMGK 659

Query: 240 LKCLSEKLKSLLLHN------NKLRTLPTEIITLKCLSELSLRDN 278
           L  L + + S    +       +L  LP +++    L++L+++  
Sbjct: 660 LTRLRQLVVSARSDSTTGSGLGRLTNLPADLVNCPALTDLTVQQQ 704



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 102/207 (49%), Gaps = 10/207 (4%)

Query: 76  SKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLS 134
           +  T LR L L   R+  LP+++   P L TL   +  LTA  LP+ + NL  L+  +L 
Sbjct: 316 AGVTTLRHLTLDGIRLAALPRSLLANPQLVTLSLVDCELTA--LPESLDNLTRLEELHLD 373

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
            N L+  P  +  +  L+ L L    L  +P  + +L +L  L+   N LT +P++ G L
Sbjct: 374 RNPLQTLPALVGRLTRLRQLSLDRCELTELPATLGQLGQLTYLTATQNHLTRLPESLGQL 433

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
            QL  L +S N L  LP S+  L  L+ L    N+L   P E+        +++ L L +
Sbjct: 434 RQLRDLNVSMNDLTDLPGSLRQLPALERLAAFTNQLTRFPVEL-------AQVRHLYLSD 486

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPLV 281
           N+L  +P  +  L+ L  L+L  NPL 
Sbjct: 487 NQLTNVPDAVGELRRLRSLTLAGNPLT 513



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 123/281 (43%), Gaps = 44/281 (15%)

Query: 46  LPNNDYNKKPENI------DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L  N     PE I      + L L  N L+  P    + + L  L+L NNR+  LP++I 
Sbjct: 507 LAGNPLTSLPETIGQLDSLEMLTLGDNQLTALPQRIGQLSRLSWLELGNNRLRELPESIG 566

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
           +   L+ ++  NN L  E LP  +   + L+  +L    L + P QI +   L+ L + +
Sbjct: 567 SLTSLTAVVIGNNPL--EILPASVGGWQRLRTASLQLPYLRRLPDQIGNWQQLEDLTIES 624

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD----------NQLE 208
           + L  +P  +     L VL+L GN L  +P+  G L +L  L++S            +L 
Sbjct: 625 DQLVLLPDALTDCRSLTVLTLSGNKLIGLPERMGKLTRLRQLVVSARSDSTTGSGLGRLT 684

Query: 209 SLPASISNLKMLKSLLLHNN----------------KLRTLP------TEIITLKCLSEK 246
           +LPA + N   L  L +                   +L+TL       T++  +      
Sbjct: 685 NLPADLVNCPALTDLTVQQQQAFDGGDALRLSAALPRLQTLSFINCGITDLSGIVWSKLS 744

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDN---PLVIRF 284
           L +L L  N+L  LP  ++ +  L++++L DN   P + RF
Sbjct: 745 LVNLNLMQNRLSQLPNSLLDMPNLTQINLADNNLPPQLNRF 785



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 63/230 (27%), Positives = 107/230 (46%), Gaps = 17/230 (7%)

Query: 76  SKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPK-DMSNLKNLKVFNLS 134
            + TNLR L  S+ ++  +    T+      +  + +  A+ LP+  ++ L  L+  +LS
Sbjct: 241 GRLTNLRKLTFSSGQLADMNALFTSLQRLETLDLDYVGPADRLPRLRLAALPALQSLHLS 300

Query: 135 GNQLEQFPIQI----LDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
               E+  + +      + TL++L L    L  +PR +    +L  LSL    LT +P++
Sbjct: 301 RYGKEEKAVDLDSTLAGVTTLRHLTLDGIRLAALPRSLLANPQLVTLSLVDCELTALPES 360

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
             +L +LE L L  N L++LPA +  L  L+ L L   +L  LP  +  L     +L  L
Sbjct: 361 LDNLTRLEELHLDRNPLQTLPALVGRLTRLRQLSLDRCELTELPATLGQLG----QLTYL 416

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELAS 300
               N L  LP  +  L+ L +L++  N        D+T  P SL +L +
Sbjct: 417 TATQNHLTRLPESLGQLRQLRDLNVSMN--------DLTDLPGSLRQLPA 458


>gi|307180798|gb|EFN68662.1| Protein lap4 [Camponotus floridanus]
          Length = 2056

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 77/224 (34%), Positives = 122/224 (54%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLT 114
           +++ LLL  N++   P N  +   LR L LS+N I  LP  I NF   +   ++RN++  
Sbjct: 38  SLEELLLDANHIRDLPKNFFRLQRLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDI-- 95

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+++ NL+ L+V + S N + + P   + +  L  L L + SL ++P +   L  L
Sbjct: 96  -PDIPENIKNLQALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEAL 154

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P++   L++LE L L DN++E LP+ I  L  L+ L L +N+L+ LP
Sbjct: 155 QSLELRENLLKSLPESLSQLFKLERLDLGDNEIEELPSHIGKLPALQELWLDHNQLQHLP 214

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK L+     L +  N+L  LP EI  L+ L++L L  N
Sbjct: 215 PEIGELKTLA----CLDVSENRLEDLPDEIGGLESLTDLHLSQN 254



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/268 (33%), Positives = 123/268 (45%), Gaps = 45/268 (16%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQA----------------IT 99
           EN+  L +  N++   P+N      L+  D S+N I  LP                  +T
Sbjct: 83  ENLVELDVSRNDIPDIPENIKNLQALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLT 142

Query: 100 NFP--------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
           N P        L +L  R NLL  +SLP+ +S L  L+  +L  N++E+ P  I  +P L
Sbjct: 143 NLPPDFGSLEALQSLELRENLL--KSLPESLSQLFKLERLDLGDNEIEELPSHIGKLPAL 200

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           + L+L +N L H+P EI +L  L  L +  N L D+PD  G L  L  L LS N +E LP
Sbjct: 201 QELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPDEIGGLESLTDLHLSQNVIEKLP 260

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE-------------------KLKSLLL 252
             +  LK L  L +  N+L TL   I   + L E                    L +L +
Sbjct: 261 DGLGELKKLTILKVDQNRLSTLNPSIGKCENLQELILTENFLLELPVSIGKLCNLNNLNV 320

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDNPL 280
             N L+ LP EI  LK L  LSLRDN L
Sbjct: 321 DRNSLQFLPIEIGNLKKLGVLSLRDNKL 348



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 115/226 (50%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E + +L L  N L   P++ S+   L  LDL +N I  LP  I   P L  L   +N L 
Sbjct: 152 EALQSLELRENLLKSLPESLSQLFKLERLDLGDNEIEELPSHIGKLPALQELWLDHNQL- 210

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            + LP ++  LK L   ++S N+LE  P +I  + +L  L+L  N +  +P  + +L KL
Sbjct: 211 -QHLPPEIGELKTLACLDVSENRLEDLPDEIGGLESLTDLHLSQNVIEKLPDGLGELKKL 269

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L +  N L+ +  + G    L+ LIL++N L  LP SI  L  L +L +  N L+ LP
Sbjct: 270 TILKVDQNRLSTLNPSIGKCENLQELILTENFLLELPVSIGKLCNLNNLNVDRNSLQFLP 329

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  LK    KL  L L +NKL+ LP E+     L  L +  N L
Sbjct: 330 IEIGNLK----KLGVLSLRDNKLQYLPAEVGQCSALHVLDVSGNRL 371



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 105/220 (47%), Gaps = 10/220 (4%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           +IE LP++   K P  +  L L HN L   P    +   L  LD+S NR+  LP  I   
Sbjct: 186 EIEELPSH-IGKLPA-LQELWLDHNQLQHLPPEIGELKTLACLDVSENRLEDLPDEIGGL 243

Query: 102 P-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
             L+ L    N++  E LP  +  LK L +  +  N+L      I     L+ L L  N 
Sbjct: 244 ESLTDLHLSQNVI--EKLPDGLGELKKLTILKVDQNRLSTLNPSIGKCENLQELILTENF 301

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P  I KLC L+ L++  NSL  +P   G+L +L  L L DN+L+ LPA +     L
Sbjct: 302 LLELPVSIGKLCNLNNLNVDRNSLQFLPIEIGNLKKLGVLSLRDNKLQYLPAEVGQCSAL 361

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
             L +  N+L  LP  +I L      LK++ L  N+ + +
Sbjct: 362 HVLDVSGNRLHYLPYSLINL-----NLKAVWLSENQAQPM 396



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/186 (36%), Positives = 97/186 (52%), Gaps = 27/186 (14%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFP--IQ--------------ILDIPT----LKYLYLG 157
           LPK+   L+ L+   LS N++ + P  IQ              I DIP     L+ L + 
Sbjct: 52  LPKNFFRLQRLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIPDIPENIKNLQALQVA 111

Query: 158 NNSLNHVPR---EINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASI 214
           + S N +PR      +L  L VL L   SLT++P  FG L  L++L L +N L+SLP S+
Sbjct: 112 DFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENLLKSLPESL 171

Query: 215 SNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           S L  L+ L L +N++  LP+ I  L  L E    L L +N+L+ LP EI  LK L+ L 
Sbjct: 172 SQLFKLERLDLGDNEIEELPSHIGKLPALQE----LWLDHNQLQHLPPEIGELKTLACLD 227

Query: 275 LRDNPL 280
           + +N L
Sbjct: 228 VSENRL 233



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 57/195 (29%), Positives = 90/195 (46%), Gaps = 15/195 (7%)

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           ++L+   L  N +   P     +  L+ L L +N ++ +P +I     L  L +  N + 
Sbjct: 37  RSLEELLLDANHIRDLPKNFFRLQRLRKLGLSDNEIHRLPPDIQNFENLVELDVSRNDIP 96

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           DIP+   +L  L+    S N +  LPA    L+ L  L L++  L  LP +  +L    E
Sbjct: 97  DIPENIKNLQALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSL----E 152

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKV 305
            L+SL L  N L++LP  +  L  L  L L DN   I  +     K P+L EL       
Sbjct: 153 ALQSLELRENLLKSLPESLSQLFKLERLDLGDN--EIEELPSHIGKLPALQELW------ 204

Query: 306 HEIDYSQ-EHLPQNL 319
             +D++Q +HLP  +
Sbjct: 205 --LDHNQLQHLPPEI 217


>gi|260802102|ref|XP_002595932.1| hypothetical protein BRAFLDRAFT_235470 [Branchiostoma floridae]
 gi|229281184|gb|EEN51944.1| hypothetical protein BRAFLDRAFT_235470 [Branchiostoma floridae]
          Length = 467

 Score =  111 bits (277), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 87/242 (35%), Positives = 125/242 (51%), Gaps = 12/242 (4%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNN-RITHLPQAITNF 101
           +E +P   +  K   I+ LLL  N+L   P       NLR L++SNN R+  LP  + N 
Sbjct: 6   LETIPQEVFEIK--EIEGLLLQDNDLESLPGEIGTLPNLRYLNVSNNHRLEDLPDEVGN- 62

Query: 102 PLSTLIARNNLL--TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
             +  +A  +L+  + + +P  + +LK L + +L  N+L+  P  I ++  L+ L+L  N
Sbjct: 63  --AQKLAHISLIHCSLQQIPAVVLSLKGLDILDLDRNKLQSIPDDISNLQVLRELWLTGN 120

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L  +P  I  L  L  L L  N LT +PD  G+L  L  L L DN+L +LPASI  +  
Sbjct: 121 QLESLPDSIGLLMNLQKLGLSRNKLTSLPDELGNLLFLRELWLRDNKLMTLPASIGEMVN 180

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L  L L  NKL  LP E+  +    E L  L L  N LR++P +I  L  L EL L +N 
Sbjct: 181 LLRLNLEENKLTYLPEEMGKM----ESLLVLRLEGNNLRSIPAQIGQLSNLEELGLSENK 236

Query: 280 LV 281
           LV
Sbjct: 237 LV 238



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 64/184 (34%), Positives = 103/184 (55%), Gaps = 7/184 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L L  N L   P++     NL+ L +  NRI   P+ ++    L +L A  N +  
Sbjct: 226 NLEELGLSENKLVKLPEDVCNLENLKELAMGKNRIEEFPEGLSRLSNLESLFANQNRIAF 285

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG----NNSLNHVPREINKL 171
             LP+D+  L+ L+  +++ N+ E FP ++LD+ +L+ LYLG          +P EI  L
Sbjct: 286 --LPRDIGKLRYLRELSIASNEFEDFPEEVLDLTSLEKLYLGQWGGGEKFTVIPEEIGTL 343

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
            +L VL L  N+  ++PD+  +L  L  L L  N+LE+LP +IS L+ L+SL +  N+L+
Sbjct: 344 VRLRVLGLDSNAFRNVPDSIENLRHLRELYLDHNKLEALPDNISFLRNLRSLDVGTNRLK 403

Query: 232 TLPT 235
            LPT
Sbjct: 404 RLPT 407



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 104/223 (46%), Gaps = 3/223 (1%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L  N L+  PD       LR L L +N++  LP +I     L  L    N LT 
Sbjct: 134 NLQKLGLSRNKLTSLPDELGNLLFLRELWLRDNKLMTLPASIGEMVNLLRLNLEENKLTY 193

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP++M  +++L V  L GN L   P QI  +  L+ L L  N L  +P ++  L  L 
Sbjct: 194 --LPEEMGKMESLLVLRLEGNNLRSIPAQIGQLSNLEELGLSENKLVKLPEDVCNLENLK 251

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L++G N + + P+    L  LE+L  + N++  LP  I  L+ L+ L + +N+    P 
Sbjct: 252 ELAMGKNRIEEFPEGLSRLSNLESLFANQNRIAFLPRDIGKLRYLRELSIASNEFEDFPE 311

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           E++ L  L +          K   +P EI TL  L  L L  N
Sbjct: 312 EVLDLTSLEKLYLGQWGGGEKFTVIPEEIGTLVRLRVLGLDSN 354



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 75/229 (32%), Positives = 107/229 (46%), Gaps = 11/229 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L  N L++ P+   K  +L  L L  N +  +P  I     L  L    N L  
Sbjct: 180 NLLRLNLEENKLTYLPEEMGKMESLLVLRLEGNNLRSIPAQIGQLSNLEELGLSENKLV- 238

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+D+ NL+NLK   +  N++E+FP  +  +  L+ L+   N +  +PR+I KL  L 
Sbjct: 239 -KLPEDVCNLENLKELAMGKNRIEEFPEGLSRLSNLESLFANQNRIAFLPRDIGKLRYLR 297

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSD----NQLESLPASISNLKMLKSLLLHNNKLR 231
            LS+  N   D P+   DL  LE L L       +   +P  I  L  L+ L L +N  R
Sbjct: 298 ELSIASNEFEDFPEEVLDLTSLEKLYLGQWGGGEKFTVIPEEIGTLVRLRVLGLDSNAFR 357

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +P  I  L+ L E    L L +NKL  LP  I  L+ L  L +  N L
Sbjct: 358 NVPDSIENLRHLRE----LYLDHNKLEALPDNISFLRNLRSLDVGTNRL 402



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 111/238 (46%), Gaps = 26/238 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA---ESLP 119
           L H +L   P        L  LDL  N++  +P  I+N      + R   LT    ESLP
Sbjct: 71  LIHCSLQQIPAVVLSLKGLDILDLDRNKLQSIPDDISNLQ----VLRELWLTGNQLESLP 126

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             +  L NL+   LS N+L   P ++ ++  L+ L+L +N L  +P  I ++  L  L+L
Sbjct: 127 DSIGLLMNLQKLGLSRNKLTSLPDELGNLLFLRELWLRDNKLMTLPASIGEMVNLLRLNL 186

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N LT +P+  G +  L  L L  N L S+PA I  L  L+ L L  NKL  LP ++  
Sbjct: 187 EENKLTYLPEEMGKMESLLVLRLEGNNLRSIPAQIGQLSNLEELGLSENKLVKLPEDVCN 246

Query: 240 LKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           L+ L E                    L+SL  + N++  LP +I  L+ L ELS+  N
Sbjct: 247 LENLKELAMGKNRIEEFPEGLSRLSNLESLFANQNRIAFLPRDIGKLRYLRELSIASN 304


>gi|418667221|ref|ZP_13228634.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Pyrogenes str. 2006006960]
 gi|410757064|gb|EKR18681.1| leucine rich repeat protein, partial [Leptospira interrogans
           serovar Pyrogenes str. 2006006960]
          Length = 259

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 77/224 (34%), Positives = 119/224 (53%), Gaps = 28/224 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           ++  L+L    L+  P    +  NL+ LDL  N+                         +
Sbjct: 51  DVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQF------------------------K 86

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++PK++  LKNL++ +L  NQ +  P +I  +  L+ L L +N L  +P+EI KL  L V
Sbjct: 87  TVPKEIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQV 146

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+L  N L  +P   G L  L+ L L  N+L++LP  I  LK L++L L+ N+L TLP+E
Sbjct: 147 LNLSSNQLITLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPSE 206

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L  L+E    L L  N+++TLP EI  L+ L +L+L +NP+
Sbjct: 207 IGQLHNLTE----LYLQYNRIKTLPEEIARLQNLRKLTLYENPI 246



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 4/108 (3%)

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           + +L L    LT +P     L  L+ L L  NQ +++P  I  LK L+ L L  N+ +T+
Sbjct: 52  VRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQFKTV 111

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P +I  LK     L+ L L +N+L TLP EI  L+ L  L+L  N L+
Sbjct: 112 PKKIGQLK----NLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLI 155


>gi|126330778|ref|XP_001373365.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           [Monodelphis domestica]
          Length = 1069

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 80/241 (33%), Positives = 116/241 (48%), Gaps = 26/241 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA------ 115
           L HN L+  P       +L  LD+S NR+ HLP A+     L TL   +N LTA      
Sbjct: 157 LSHNQLADLPAQLGSLGHLEELDVSFNRLPHLPDALGCLRALRTLDLDHNQLTAFPPQLL 216

Query: 116 ---------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                            LP+++  L+ LK+  LSG +L   P     + +L+ L L +N 
Sbjct: 217 QLGTLEELDLSGNRLRGLPEEIGALRALKILWLSGAELGTLPSGFCQLASLESLMLDSNG 276

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P + + L +L +L+L  N   D P     L  LE L LS N+L +LPA +S L  L
Sbjct: 277 LQALPAQFSCLQQLRMLNLSSNCFEDFPGALLPLASLEELYLSRNRLTALPALVSRLSRL 336

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DNPL
Sbjct: 337 LTLWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDNFGQLSRVGLWKVKDNPL 392

Query: 281 V 281
           +
Sbjct: 393 I 393



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 77/228 (33%), Positives = 107/228 (46%), Gaps = 11/228 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTN----LRSLDLSNNRITHLPQAITNFP--LSTLIARN 110
           +++ L L +N L   P   +        LR L L  NR+  LP  +      L+ L   +
Sbjct: 76  DVEVLNLGNNALDELPAGLATALGSLPLLRGLVLRRNRLPRLPPLLGQLGARLTELDVSH 135

Query: 111 NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
           N L A +  + +S L  L+  NLS NQL   P Q+  +  L+ L +  N L H+P  +  
Sbjct: 136 NRLGAVAA-EVLSALPQLRKLNLSHNQLADLPAQLGSLGHLEELDVSFNRLPHLPDALGC 194

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L  L L  N LT  P     L  LE L LS N+L  LP  I  L+ LK L L   +L
Sbjct: 195 LRALRTLDLDHNQLTAFPPQLLQLGTLEELDLSGNRLRGLPEEIGALRALKILWLSGAEL 254

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            TLP+      C    L+SL+L +N L+ LP +   L+ L  L+L  N
Sbjct: 255 GTLPSGF----CQLASLESLMLDSNGLQALPAQFSCLQQLRMLNLSSN 298



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 74/181 (40%), Gaps = 56/181 (30%)

Query: 147 DIPTLKYLYLGNNSLNHVPREI-------------------------------------- 168
           DI  ++ L LGNN+L+ +P  +                                      
Sbjct: 73  DIADVEVLNLGNNALDELPAGLATALGSLPLLRGLVLRRNRLPRLPPLLGQLGARLTELD 132

Query: 169 --------------NKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASI 214
                         + L +L  L+L  N L D+P   G L  LE L +S N+L  LP ++
Sbjct: 133 VSHNRLGAVAAEVLSALPQLRKLNLSHNQLADLPAQLGSLGHLEELDVSFNRLPHLPDAL 192

Query: 215 SNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
             L+ L++L L +N+L   P +++ L  L E    L L  N+LR LP EI  L+ L  L 
Sbjct: 193 GCLRALRTLDLDHNQLTAFPPQLLQLGTLEE----LDLSGNRLRGLPEEIGALRALKILW 248

Query: 275 L 275
           L
Sbjct: 249 L 249



 Score = 40.4 bits (93), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 36/157 (22%), Positives = 68/157 (43%), Gaps = 4/157 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           +++ L L  N L+  P   S+ + L +L L NNRI +LP +I     L  L+ + N +  
Sbjct: 312 SLEELYLSRNRLTALPALVSRLSRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAV 371

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP +   L  + ++ +  N L Q P ++  +  + Y+      L H    +    KL 
Sbjct: 372 --LPDNFGQLSRVGLWKVKDNPLIQPPYEVC-MKGIPYIAAYQKELAHSQPAVQPRLKLL 428

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
           +L    +  T +     +  Q E + +  ++ +  P 
Sbjct: 429 LLGQKASGKTSLRRCLTEGDQEEGMRVGRSREKDHPG 465


>gi|255074191|ref|XP_002500770.1| predicted protein [Micromonas sp. RCC299]
 gi|226516033|gb|ACO62028.1| predicted protein [Micromonas sp. RCC299]
          Length = 256

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 113/214 (52%), Gaps = 7/214 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           +++ L L HN L+  P      T+LR+L LS+N++T +P  I     L+ L   +NLLT 
Sbjct: 34  SLERLELNHNELTRVPAEIGLLTSLRALSLSSNKLTSVPVEIGQLTSLTALFLGDNLLT- 92

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P ++  L +L+   L  N+L     +I  + +L  L LGNN L  +P EI +L  L 
Sbjct: 93  -RVPAEVGQLASLEGLFLGDNRLTSVLAEIGQLTSLTELSLGNNQLTSLPAEIGRLTSLT 151

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +P   G L  L  L L++NQL SLPA I  L  L  L L+ N+L ++P 
Sbjct: 152 ALLLYDNQLTSVPAEIGQLTSLVKLSLTENQLTSLPAEIGQLTSLTELYLYGNQLTSVPA 211

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           EI  L  L      L L +N+L ++P  I  L+ 
Sbjct: 212 EIGQLTSLVR----LYLGDNRLTSVPAAIRELRA 241



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/200 (38%), Positives = 111/200 (55%), Gaps = 7/200 (3%)

Query: 82  RSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           R+  L+ N++T +P  I +   L  L   +N LT   +P ++  L +L+  +LS N+L  
Sbjct: 13  RAAHLAENQLTSVPAEIGHLTSLERLELNHNELT--RVPAEIGLLTSLRALSLSSNKLTS 70

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P++I  + +L  L+LG+N L  VP E+ +L  L  L LG N LT +    G L  L  L
Sbjct: 71  VPVEIGQLTSLTALFLGDNLLTRVPAEVGQLASLEGLFLGDNRLTSVLAEIGQLTSLTEL 130

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L +NQL SLPA I  L  L +LLL++N+L ++P EI  L  L +    L L  N+L +L
Sbjct: 131 SLGNNQLTSLPAEIGRLTSLTALLLYDNQLTSVPAEIGQLTSLVK----LSLTENQLTSL 186

Query: 261 PTEIITLKCLSELSLRDNPL 280
           P EI  L  L+EL L  N L
Sbjct: 187 PAEIGQLTSLTELYLYGNQL 206


>gi|418697258|ref|ZP_13258252.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|409955033|gb|EKO13980.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
          Length = 315

 Score =  110 bits (276), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 88/250 (35%), Positives = 134/250 (53%), Gaps = 17/250 (6%)

Query: 16  SDSFKTVS-IKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDN 74
           SD+ KT + ++ LD S + L   TL  +IE L N         +++L L  N L+  P+ 
Sbjct: 39  SDALKTPNEVQILDLSRNQLT--TLPKEIEQLVN---------LESLYLRDNELTTLPEE 87

Query: 75  ASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLS 134
             K  NL+ LD+S NRI++ P+         ++  N      +LP+++  L+N+K  ++S
Sbjct: 88  IGKLKNLKYLDISRNRISNFPKEFWKLKNLEVLLLN-ENNLSNLPEEIGELENIKDLDIS 146

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
            N++  FP +   +  LK L+L  N+L+++P EI +L  L VL L  N LT +P   G+L
Sbjct: 147 RNRISNFPKEFWKLKNLKILFLNENNLSNLPEEIGELENLSVLILSDNQLTTLPVEIGEL 206

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
             +  L +S N++ + P  I  L+ LK+L L  N L TLP EI  L    E L  L L  
Sbjct: 207 KNIHTLDISRNRISNFPKGIQKLQNLKALFLSINNLSTLPKEIGKL----ENLLFLHLSG 262

Query: 255 NKLRTLPTEI 264
           NKL +LP EI
Sbjct: 263 NKLTSLPKEI 272



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 93/200 (46%), Gaps = 37/200 (18%)

Query: 112 LLTAESLPKDMSNLKNL----------KVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
           LL  +S PK +   KNL          ++ +LS NQL   P +I  +  L+ LYL +N L
Sbjct: 22  LLELQSQPKKVIIHKNLSDALKTPNEVQILDLSRNQLTTLPKEIEQLVNLESLYLRDNEL 81

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTF-----------------------GDLYQLE 198
             +P EI KL  L  L +  N +++ P  F                       G+L  ++
Sbjct: 82  TTLPEEIGKLKNLKYLDISRNRISNFPKEFWKLKNLEVLLLNENNLSNLPEEIGELENIK 141

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L +S N++ + P     LK LK L L+ N L  LP EI  L+ LS     L+L +N+L 
Sbjct: 142 DLDISRNRISNFPKEFWKLKNLKILFLNENNLSNLPEEIGELENLS----VLILSDNQLT 197

Query: 259 TLPTEIITLKCLSELSLRDN 278
           TLP EI  LK +  L +  N
Sbjct: 198 TLPVEIGELKNIHTLDISRN 217


>gi|383856855|ref|XP_003703922.1| PREDICTED: LOW QUALITY PROTEIN: protein lap4-like [Megachile
           rotundata]
          Length = 2047

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 122/224 (54%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLT 114
           +++ LLL  N++S  P N  +   LR L LS+N I  LP  I NF   +   ++RN++  
Sbjct: 38  SLEELLLDANHISDLPKNFFRLQRLRKLGLSDNDIHRLPPDIQNFENLVELDVSRNDI-- 95

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+++ NL+ L+V + S N + + P   + +  L  L L + SL ++P +   L  L
Sbjct: 96  -PDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEAL 154

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P++   LY+LE L L DN ++ LPA I  L  L+ L L +N+L+ LP
Sbjct: 155 QSLELRENLLKTLPESLSKLYKLERLDLGDNDIDVLPAHIGKLPALQELWLDHNQLQHLP 214

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            E+  LK L+     L +  N+L  LP EI  L+ L++L L  N
Sbjct: 215 PELGQLKTLA----CLDVSENRLEDLPEEIGGLESLTDLHLSQN 254



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 91/284 (32%), Positives = 132/284 (46%), Gaps = 51/284 (17%)

Query: 46  LPNNDYNKKP------ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQA-- 97
           L +ND ++ P      EN+  L +  N++   P+N      L+  D S+N I  LP    
Sbjct: 67  LSDNDIHRLPPDIQNFENLVELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFV 126

Query: 98  --------------ITNFP--------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSG 135
                         +TN P        L +L  R NLL  ++LP+ +S L  L+  +L  
Sbjct: 127 QLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENLL--KTLPESLSKLYKLERLDLGD 184

Query: 136 NQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLY 195
           N ++  P  I  +P L+ L+L +N L H+P E+ +L  L  L +  N L D+P+  G L 
Sbjct: 185 NDIDVLPAHIGKLPALQELWLDHNQLQHLPPELGQLKTLACLDVSENRLEDLPEEIGGLE 244

Query: 196 QLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE---------K 246
            L  L LS N +E LP  +  LK L  L +  N+L TL   I + + L E         +
Sbjct: 245 SLTDLHLSQNVIEKLPDGLGELKKLTILKVDQNRLSTLNPNIGSCENLQELILTENFLFE 304

Query: 247 LKSLL----------LHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L S +          +  N L++LPTEI  LK L  LSLRDN L
Sbjct: 305 LPSTIGKLLNLNNLNVDRNSLQSLPTEIGNLKQLGVLSLRDNKL 348



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 117/226 (51%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E + +L L  N L   P++ SK   L  LDL +N I  LP  I   P L  L   +N L 
Sbjct: 152 EALQSLELRENLLKTLPESLSKLYKLERLDLGDNDIDVLPAHIGKLPALQELWLDHNQL- 210

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            + LP ++  LK L   ++S N+LE  P +I  + +L  L+L  N +  +P  + +L KL
Sbjct: 211 -QHLPPELGQLKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVIEKLPDGLGELKKL 269

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L +  N L+ +    G    L+ LIL++N L  LP++I  L  L +L +  N L++LP
Sbjct: 270 TILKVDQNRLSTLNPNIGSCENLQELILTENFLFELPSTIGKLLNLNNLNVDRNSLQSLP 329

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           TEI  LK    +L  L L +NKL+ LP E+     L  L +  N L
Sbjct: 330 TEIGNLK----QLGVLSLRDNKLQYLPVEVGQCTALHVLDVSGNRL 371



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 64/203 (31%), Positives = 94/203 (46%), Gaps = 15/203 (7%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LPK+   L+ L+   LS N + + P  I +   L  L +  N +  +P  I  L  L V 
Sbjct: 52  LPKNFFRLQRLRKLGLSDNDIHRLPPDIQNFENLVELDVSRNDIPDIPENIKNLRALQVA 111

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
               N +  +P  F  L  L  L L+D  L +LP    +L+ L+SL L  N L+TLP  +
Sbjct: 112 DFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPPDFGSLEALQSLELRENLLKTLPESL 171

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLE 297
             L     KL+ L L +N +  LP  I  L  L EL L  N L         + PP L +
Sbjct: 172 SKLY----KLERLDLGDNDIDVLPAHIGKLPALQELWLDHNQL--------QHLPPELGQ 219

Query: 298 LASRTLKVHEIDYSQ-EHLPQNL 319
           L  +TL   ++  ++ E LP+ +
Sbjct: 220 L--KTLACLDVSENRLEDLPEEI 240



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/197 (30%), Positives = 86/197 (43%), Gaps = 27/197 (13%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L HN L   P    +   L  LD+S NR+  LP+ I     L+ L    N++  E LP
Sbjct: 203 LWLDHNQLQHLPPELGQLKTLACLDVSENRLEDLPEEIGGLESLTDLHLSQNVI--EKLP 260

Query: 120 KDMSNLKNLKVFNLSGNQLE-----------------------QFPIQILDIPTLKYLYL 156
             +  LK L +  +  N+L                        + P  I  +  L  L +
Sbjct: 261 DGLGELKKLTILKVDQNRLSTLNPNIGSCENLQELILTENFLFELPSTIGKLLNLNNLNV 320

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
             NSL  +P EI  L +L VLSL  N L  +P   G    L  L +S N+L+ LP S+ N
Sbjct: 321 DRNSLQSLPTEIGNLKQLGVLSLRDNKLQYLPVEVGQCTALHVLDVSGNRLQYLPYSLIN 380

Query: 217 LKMLKSLLLHNNKLRTL 233
           L  LK++ L  N+ + +
Sbjct: 381 LN-LKAVWLSENQAQPM 396



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 96/207 (46%), Gaps = 16/207 (7%)

Query: 117 SLPKDMSNL-KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           S+P D+    ++L+   L  N +   P     +  L+ L L +N ++ +P +I     L 
Sbjct: 27  SVPDDILRYSRSLEELLLDANHISDLPKNFFRLQRLRKLGLSDNDIHRLPPDIQNFENLV 86

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L +  N + DIP+   +L  L+    S N +  LPA    L+ L  L L++  L  LP 
Sbjct: 87  ELDVSRNDIPDIPENIKNLRALQVADFSSNPIPRLPAGFVQLRNLTVLGLNDMSLTNLPP 146

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
           +  +L    E L+SL L  N L+TLP  +  L  L  L L DN   I  +     K P+L
Sbjct: 147 DFGSL----EALQSLELRENLLKTLPESLSKLYKLERLDLGDND--IDVLPAHIGKLPAL 200

Query: 296 LELASRTLKVHEIDYSQ-EHLPQNLVQ 321
            EL         +D++Q +HLP  L Q
Sbjct: 201 QELW--------LDHNQLQHLPPELGQ 219


>gi|410449672|ref|ZP_11303725.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410016429|gb|EKO78508.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 355

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 91/230 (39%), Positives = 122/230 (53%), Gaps = 9/230 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITH--LPQAITNFP-LSTLIARNNL 112
           +N+  L L++N L   P+N  +  NL  LDLSNNR T   L + I +   L  L    N 
Sbjct: 114 KNLKKLDLHYNLLITLPENIGRLQNLEVLDLSNNRRTFFFLSEKIGDLQSLEKLDLSENS 173

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L+  +LPK++  L+ L+  +LS N L   P +I  +  L+ L L  N L  +P+EI KL 
Sbjct: 174 LS--TLPKEIGKLQCLQSLDLSENSLAILPKEIGKLQCLRELSLKGNRLKTLPKEIGKLQ 231

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            LH L L  NSLT +P   G L  L +L LS+N L +LP  I  L+ L +L L  N L T
Sbjct: 232 CLHSLDLSENSLTTLPKEIGKLQCLHSLDLSENSLTTLPKEIGKLQNLSNLDLSENSLTT 291

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           LP EI  L    + L  L L  N L TLP EI   + LS L L++N   +
Sbjct: 292 LPKEIAKL----QNLYDLDLRKNSLTTLPKEIGKPQNLSNLDLKENSFSV 337



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 93/255 (36%), Positives = 126/255 (49%), Gaps = 32/255 (12%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP---------- 102
           +KP ++  L L    +   P   +   NLR LDL +N++T LP+ I              
Sbjct: 42  QKPSDVHILDLSGQQIKNLPRQIANLKNLRELDLRDNQLTTLPKEIGQLHNLQSLDLSSN 101

Query: 103 --------------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPI--QIL 146
                         L  L    NLL   +LP+++  L+NL+V +LS N+   F +  +I 
Sbjct: 102 SLSTLPEEIGHLKNLKKLDLHYNLLI--TLPENIGRLQNLEVLDLSNNRRTFFFLSEKIG 159

Query: 147 DIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQ 206
           D+ +L+ L L  NSL+ +P+EI KL  L  L L  NSL  +P   G L  L  L L  N+
Sbjct: 160 DLQSLEKLDLSENSLSTLPKEIGKLQCLQSLDLSENSLAILPKEIGKLQCLRELSLKGNR 219

Query: 207 LESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIIT 266
           L++LP  I  L+ L SL L  N L TLP EI  L+CL     SL L  N L TLP EI  
Sbjct: 220 LKTLPKEIGKLQCLHSLDLSENSLTTLPKEIGKLQCLH----SLDLSENSLTTLPKEIGK 275

Query: 267 LKCLSELSLRDNPLV 281
           L+ LS L L +N L 
Sbjct: 276 LQNLSNLDLSENSLT 290



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 106/309 (34%), Positives = 142/309 (45%), Gaps = 34/309 (11%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASK---------------------- 77
             QI+ LP    N K  N+  L L  N L+  P    +                      
Sbjct: 54  GQQIKNLPRQIANLK--NLRELDLRDNQLTTLPKEIGQLHNLQSLDLSSNSLSTLPEEIG 111

Query: 78  -FTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSG 135
              NL+ LDL  N +  LP+ I     L  L   NN  T   L + + +L++L+  +LS 
Sbjct: 112 HLKNLKKLDLHYNLLITLPENIGRLQNLEVLDLSNNRRTFFFLSEKIGDLQSLEKLDLSE 171

Query: 136 NQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLY 195
           N L   P +I  +  L+ L L  NSL  +P+EI KL  L  LSL GN L  +P   G L 
Sbjct: 172 NSLSTLPKEIGKLQCLQSLDLSENSLAILPKEIGKLQCLRELSLKGNRLKTLPKEIGKLQ 231

Query: 196 QLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNN 255
            L +L LS+N L +LP  I  L+ L SL L  N L TLP EI  L+ LS    +L L  N
Sbjct: 232 CLHSLDLSENSLTTLPKEIGKLQCLHSLDLSENSLTTLPKEIGKLQNLS----NLDLSEN 287

Query: 256 KLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL--LELASRTLKVHEIDYSQE 313
            L TLP EI  L+ L +L LR N L    +     KP +L  L+L   +  V+E    ++
Sbjct: 288 SLTTLPKEIAKLQNLYDLDLRKNSLTT--LPKEIGKPQNLSNLDLKENSFSVYEKKRIRK 345

Query: 314 HLPQNLVQY 322
            LP   V +
Sbjct: 346 LLPNCFVDF 354



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 69/186 (37%), Positives = 99/186 (53%), Gaps = 12/186 (6%)

Query: 104 STLIARNNLLTAESLPKDMSNL----KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
           ST +   N    E + +D+        ++ + +LSG Q++  P QI ++  L+ L L +N
Sbjct: 19  STEVKSQNEKAEEKIYRDLREAFQKPSDVHILDLSGQQIKNLPRQIANLKNLRELDLRDN 78

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L  +P+EI +L  L  L L  NSL+ +P+  G L  L+ L L  N L +LP +I  L+ 
Sbjct: 79  QLTTLPKEIGQLHNLQSLDLSSNSLSTLPEEIGHLKNLKKLDLHYNLLITLPENIGRLQN 138

Query: 220 LKSLLLHNNKLRT---LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           L+ L L NN+ RT   L  +I  L+ L EKL    L  N L TLP EI  L+CL  L L 
Sbjct: 139 LEVLDLSNNR-RTFFFLSEKIGDLQSL-EKLD---LSENSLSTLPKEIGKLQCLQSLDLS 193

Query: 277 DNPLVI 282
           +N L I
Sbjct: 194 ENSLAI 199



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 48/114 (42%), Positives = 61/114 (53%), Gaps = 4/114 (3%)

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           +H+L L G  + ++P    +L  L  L L DNQL +LP  I  L  L+SL L +N L TL
Sbjct: 47  VHILDLSGQQIKNLPRQIANLKNLRELDLRDNQLTTLPKEIGQLHNLQSLDLSSNSLSTL 106

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSD 287
           P EI  LK     LK L LH N L TLP  I  L+ L  L L +N     F+S+
Sbjct: 107 PEEIGHLK----NLKKLDLHYNLLITLPENIGRLQNLEVLDLSNNRRTFFFLSE 156


>gi|417785421|ref|ZP_12433125.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409951286|gb|EKO05801.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 408

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/190 (42%), Positives = 103/190 (54%), Gaps = 7/190 (3%)

Query: 69  SFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKN 127
           +  P   ++  NL+ L L  NR+T LP+ I     L  L    N LT   LPK++  LKN
Sbjct: 205 TILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTI--LPKEIGQLKN 262

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           L V +LSGNQL   P +I  +  L+ L L  N     P+EI +   L VL L  N LT +
Sbjct: 263 LLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTIL 322

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
           P+  G L  L+ L LS NQL +LP  I  L+ L+SL L +N+L TLP EI  LK     L
Sbjct: 323 PEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLK----NL 378

Query: 248 KSLLLHNNKL 257
           K L LHNN L
Sbjct: 379 KKLYLHNNPL 388



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 129/250 (51%), Gaps = 24/250 (9%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP---LSTLIARN 110
           K +N+  L L+ N L+  P    +  NL+ L LS NR+T LP+ I         +L  +N
Sbjct: 142 KLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKN 201

Query: 111 NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
              T   LPK+++ L+NL+  +L  N+L   P +I  +  L+ L L  N L  +P+EI +
Sbjct: 202 KPFTI--LPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQ 259

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L VL L GN LT +P     L  L+ L L  N+ E+ P  I+  + L+ L L+ N+L
Sbjct: 260 LKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRL 319

Query: 231 RTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLS 271
             LP EI  L+ L                    +KL+SL L +N+L TLP EI  LK L 
Sbjct: 320 TILPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLK 379

Query: 272 ELSLRDNPLV 281
           +L L +NPL+
Sbjct: 380 KLYLHNNPLL 389



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 98/279 (35%), Positives = 139/279 (49%), Gaps = 21/279 (7%)

Query: 4   NYGSSSSSDSSDSDSFKTV-SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLL 62
           NY +     ++ +++ K    ++ LD S S L  + L  +I  L         +N+  L 
Sbjct: 33  NYTTKEGLYTNLTEALKNPNEVRILDLSRSKL--KILPKEIGQL---------QNLQILN 81

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
             +N L+  P    K  NL+ L L NN++T LP+ I     L  L   NN LT  +LP++
Sbjct: 82  SENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLT--TLPEE 139

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L+NL+  NL  N+L   P +I  +  L+ LYL  N L  +P EI +L  L  LSLGG
Sbjct: 140 IGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGG 199

Query: 182 NS--LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
            +   T +P     L  L+ L L  N+L  LP  I  L+ L+ L L+ N+L  LP EI  
Sbjct: 200 KNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQ 259

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           LK L      L L  N+L  LP EI  L+ L EL+L  N
Sbjct: 260 LKNLL----VLDLSGNQLTILPKEITQLQNLQELNLEYN 294



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/233 (37%), Positives = 120/233 (51%), Gaps = 9/233 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K P  +  L L  + L   P    +  NL+ L+  NN++T LP+ I     L  L  +NN
Sbjct: 49  KNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNN 108

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  +LP+++  L+NLKV +L+ NQL   P +I  +  L+ L L  N LN +P+EI +L
Sbjct: 109 QLT--TLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRL 166

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILS--DNQLESLPASISNLKMLKSLLLHNNK 229
             L  L L  N LT +P+  G L  L  L L   +     LP  I+ L+ L+ L L  N+
Sbjct: 167 QNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNR 226

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           L  LP EI  L    + L+ L L+ N+L  LP EI  LK L  L L  N L I
Sbjct: 227 LTVLPKEIGQL----QNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTI 275


>gi|254390720|ref|ZP_05005933.1| leucine-rich repeat-containing protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|294812695|ref|ZP_06771338.1| Small GTP-binding protein [Streptomyces clavuligerus ATCC 27064]
 gi|197704420|gb|EDY50232.1| leucine-rich repeat-containing protein [Streptomyces clavuligerus
           ATCC 27064]
 gi|294325294|gb|EFG06937.1| Small GTP-binding protein [Streptomyces clavuligerus ATCC 27064]
          Length = 395

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 137/294 (46%), Gaps = 39/294 (13%)

Query: 24  IKTLDFSYSSLDS-----ETLATQIEL-LPNNDYNKKPE------NIDTLLLYHNNLSFF 71
           +  LD S++ LD        L    EL L +N +++ P+       +  L LY N LS  
Sbjct: 87  LAALDLSFNLLDDLPADLGRLHRLTELRLDSNQFSRFPDAVLGLTGLQVLSLYRNGLSNV 146

Query: 72  PDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT---------------- 114
           P        +R L+L+ NR++ +P  I     L TL   +N LT                
Sbjct: 147 PSGLGGLREIRVLNLAGNRLSSVPAEIGALSRLHTLDLGHNELTDIPPSLGDVTGLSRYL 206

Query: 115 ------AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREI 168
                   S+P  +  L +L+  N++ N+L   P +  D+ +L+ L L +N L  +PR I
Sbjct: 207 YLSDNKITSVPDSLCRLGHLRYLNITDNRLTALPERFGDLASLRELRLYHNRLTGLPRSI 266

Query: 169 NKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
             L +L    L GN LT +P+  G L  L  L L DN++ +LP +I  L  L  L L NN
Sbjct: 267 GALRELREAHLMGNRLTGLPEEIGGLADLRELRLMDNRVTALPDTIGGLVRLTRLDLRNN 326

Query: 229 KLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           +LR +P  I  L    ++L  L L NN+L  LP  +  L  L +L LR NPL +
Sbjct: 327 ELRAVPDAIGRL----DRLTHLDLRNNRLHELPPTLAALPRLEKLDLRWNPLAL 376



 Score = 81.6 bits (200), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 11/204 (5%)

Query: 83  SLDLSNNRITHLPQAITNFP----LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           SL      +  LP+A+        L+ L    NLL  + LP D+  L  L    L  NQ 
Sbjct: 63  SLSAREQGMRSLPEALPEIARLEDLAALDLSFNLL--DDLPADLGRLHRLTELRLDSNQF 120

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
            +FP  +L +  L+ L L  N L++VP  +  L ++ VL+L GN L+ +P   G L +L 
Sbjct: 121 SRFPDAVLGLTGLQVLSLYRNGLSNVPSGLGGLREIRVLNLAGNRLSSVPAEIGALSRLH 180

Query: 199 ALILSDNQLESLPASISNLKML-KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
            L L  N+L  +P S+ ++  L + L L +NK+ ++P  +    C    L+ L + +N+L
Sbjct: 181 TLDLGHNELTDIPPSLGDVTGLSRYLYLSDNKITSVPDSL----CRLGHLRYLNITDNRL 236

Query: 258 RTLPTEIITLKCLSELSLRDNPLV 281
             LP     L  L EL L  N L 
Sbjct: 237 TALPERFGDLASLRELRLYHNRLT 260



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 97/184 (52%), Gaps = 5/184 (2%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N ++  PD+  +  +LR L++++NR+T LP+   +   L  L   +N LT   LP
Sbjct: 206 LYLSDNKITSVPDSLCRLGHLRYLNITDNRLTALPERFGDLASLRELRLYHNRLTG--LP 263

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
           + +  L+ L+  +L GN+L   P +I  +  L+ L L +N +  +P  I  L +L  L L
Sbjct: 264 RSIGALRELREAHLMGNRLTGLPEEIGGLADLRELRLMDNRVTALPDTIGGLVRLTRLDL 323

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN--KLRTLPTEI 237
             N L  +PD  G L +L  L L +N+L  LP +++ L  L+ L L  N   L  LP  +
Sbjct: 324 RNNELRAVPDAIGRLDRLTHLDLRNNRLHELPPTLAALPRLEKLDLRWNPLALDPLPAWV 383

Query: 238 ITLK 241
            +L+
Sbjct: 384 SSLE 387


>gi|118088954|ref|XP_419907.2| PREDICTED: leucine-rich repeat-containing protein 1 [Gallus gallus]
          Length = 473

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 89/252 (35%), Positives = 130/252 (51%), Gaps = 15/252 (5%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTA 115
           N+ +L L  N L++ P++ ++   L  LDL NN + HLP+ I   F L  L    N L  
Sbjct: 101 NLASLELRENLLTYLPESLAQLQRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLA- 159

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+++ NLKNL   ++S N+LE  P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 160 -EIPQEVGNLKNLLCLDVSENKLECLPEEINGLTSLTDLLVSQNLLQVLPDGIGKLRKLS 218

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N L  + D+ GD   L  L+L++NQL+ LP SI  LK L +L    NKL +LP 
Sbjct: 219 ILKVDQNKLIQLTDSIGDCESLTELVLTENQLQILPKSIGKLKKLNNLNADRNKLTSLPK 278

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
           EI    C S  L    + +N+L  +P+EI     L  L +  N L        TY P SL
Sbjct: 279 EIG--GCCS--LNVFSVRDNRLSRIPSEISQATELHVLDVAGNRL--------TYLPISL 326

Query: 296 LELASRTLKVHE 307
             L  + L + +
Sbjct: 327 TTLKLKALWLSD 338



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/243 (33%), Positives = 121/243 (49%), Gaps = 11/243 (4%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      L  N++   P++ S    L+  D S N +T LP++  
Sbjct: 15  LSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFP 74

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + ++LP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 75  ELQNLTCLSVNDI-SLQALPENIGNLYNLASLELRENLLTYLPESLAQLQRLEELDLGNN 133

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L H+P  I  L  L  L L GN L +IP   G+L  L  L +S+N+LE LP  I+ L  
Sbjct: 134 ELYHLPETIGALFNLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECLPEEINGLTS 193

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L  LL+  N L+ LP  I  L+    KL  L +  NKL  L   I   + L+EL L +N 
Sbjct: 194 LTDLLVSQNLLQVLPDGIGKLR----KLSILKVDQNKLIQLTDSIGDCESLTELVLTENQ 249

Query: 280 LVI 282
           L I
Sbjct: 250 LQI 252



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/230 (35%), Positives = 113/230 (49%), Gaps = 32/230 (13%)

Query: 77  KFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTAESLPKDMSNLKNLKVFNLS 134
           +   LR L LS+N I  LP  I NF  L  L ++RN++     +P+ +S  K L+V + S
Sbjct: 6   QLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDI---PEIPESISFCKALQVADFS 62

Query: 135 GNQL----EQFP------------IQILDIP-------TLKYLYLGNNSLNHVPREINKL 171
           GN L    E FP            I +  +P        L  L L  N L ++P  + +L
Sbjct: 63  GNPLTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLLTYLPESLAQL 122

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
            +L  L LG N L  +P+T G L+ L+ L L  NQL  +P  + NLK L  L +  NKL 
Sbjct: 123 QRLEELDLGNNELYHLPETIGALFNLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLE 182

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            LP EI  L  L++    LL+  N L+ LP  I  L+ LS L +  N L+
Sbjct: 183 CLPEEINGLTSLTD----LLVSQNLLQVLPDGIGKLRKLSILKVDQNKLI 228



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 66/220 (30%), Positives = 97/220 (44%), Gaps = 33/220 (15%)

Query: 46  LPNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN+    PE      N+  L L  N L+  P       NL  LD+S N++  LP+ I 
Sbjct: 130 LGNNELYHLPETIGALFNLKDLWLDGNQLAEIPQEVGNLKNLLCLDVSENKLECLPEEIN 189

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFN-----------------------LSG 135
               L+ L+   NLL  + LP  +  L+ L +                         L+ 
Sbjct: 190 GLTSLTDLLVSQNLL--QVLPDGIGKLRKLSILKVDQNKLIQLTDSIGDCESLTELVLTE 247

Query: 136 NQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLY 195
           NQL+  P  I  +  L  L    N L  +P+EI   C L+V S+  N L+ IP       
Sbjct: 248 NQLQILPKSIGKLKKLNNLNADRNKLTSLPKEIGGCCSLNVFSVRDNRLSRIPSEISQAT 307

Query: 196 QLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L  L ++ N+L  LP S++ LK LK+L L +N+ + L T
Sbjct: 308 ELHVLDVAGNRLTYLPISLTTLK-LKALWLSDNQSQPLLT 346



 Score = 40.0 bits (92), Expect = 1.9,   Method: Compositional matrix adjust.
 Identities = 44/151 (29%), Positives = 64/151 (42%), Gaps = 34/151 (22%)

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS------ 244
           F  L +L  L LSDN+++ LP  I+N   L  L L  N +  +P  I   K L       
Sbjct: 4   FFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKALQVADFSG 63

Query: 245 -------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYK 291
                        + L  L +++  L+ LP  I  L  L+ L LR+N L        TY 
Sbjct: 64  NPLTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLASLELRENLL--------TYL 115

Query: 292 PPSLLELASRTLKVHEIDYSQE---HLPQNL 319
           P SL +L     ++ E+D       HLP+ +
Sbjct: 116 PESLAQLQ----RLEELDLGNNELYHLPETI 142


>gi|434385707|ref|YP_007096318.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
 gi|428016697|gb|AFY92791.1| leucine-rich repeat (LRR) protein [Chamaesiphon minutus PCC 6605]
          Length = 400

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/229 (36%), Positives = 118/229 (51%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  + + H NL   P +  + T+L  L L NN +  LP++I     L +L  R+N 
Sbjct: 14  KDKNLQRISIEHGNLGALPSSIGQVTSLLRLTLVNNMLKTLPESIGQLTNLKSLEIRDNR 73

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP+ +  L NL+   L  N+L   P  I  +  L  L L  N L  +P  + +L 
Sbjct: 74  LT--TLPESIELLTNLESLELWNNRLINLPESIGRLTNLTLLDLQQNQLTTLPESVGQLT 131

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L+ + LG N LT +PD+F +L  L++L LSDNQ  S+P SI  L  LK L L  N+L  
Sbjct: 132 SLNYIELGNNQLTSLPDSFKNLIDLQSLQLSDNQFTSVPESIGELTNLKWLDLDGNQLTN 191

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP  I         LK L + +N L +LP     L+ L  L L +NPL 
Sbjct: 192 LPEFIGEFS----NLKRLKIQDNHLTSLPLWFTKLEKLERLELSNNPLT 236



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 95/178 (53%), Gaps = 3/178 (1%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ +L +  N L+  P++    TNL SL+L NNR+ +LP++I     L+ L  + N LT 
Sbjct: 63  NLKSLEIRDNRLTTLPESIELLTNLESLELWNNRLINLPESIGRLTNLTLLDLQQNQLT- 121

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LP+ +  L +L    L  NQL   P    ++  L+ L L +N    VP  I +L  L 
Sbjct: 122 -TLPESVGQLTSLNYIELGNNQLTSLPDSFKNLIDLQSLQLSDNQFTSVPESIGELTNLK 180

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
            L L GN LT++P+  G+   L+ L + DN L SLP   + L+ L+ L L NN L  L
Sbjct: 181 WLDLDGNQLTNLPEFIGEFSNLKRLKIQDNHLTSLPLWFTKLEKLERLELSNNPLTDL 238


>gi|198429521|ref|XP_002125267.1| PREDICTED: similar to Suppressor Of Clr family member (soc-2)
           [Ciona intestinalis]
          Length = 733

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 97/294 (32%), Positives = 143/294 (48%), Gaps = 10/294 (3%)

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNL 125
           NL+  P      T L+ L  +NN++  +P  +     L  +  R N LT  SLP+ + +L
Sbjct: 25  NLNEVPKEVFDITELQCLVANNNKLKEIPSDVRKLSCLQAISLRGNALT--SLPESLCDL 82

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           K L+    S NQ++  P +I ++  L  LY   N L  +P  I+ L +L VL L GN +T
Sbjct: 83  KYLEYLECSDNQIKSLPHRIGNLKNLIQLYANRNCLTELPVGISYLWQLEVLGLNGNRIT 142

Query: 186 DIPDTFGD-LYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
            +P   G  L Q+  L LS+N L +LP +I  ++ L  L L  NK+ +LP+ I  L    
Sbjct: 143 HLPIEMGQFLEQIRILGLSNNCLNALPTAICRMRKLVKLGLSGNKISSLPSTIRRL---- 198

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLK 304
           E L  L L +N+LR LP+++ TLK L EL+L  N   +R V     + PSL  L     +
Sbjct: 199 ESLIDLRLDDNRLRFLPSQLFTLKSLEELALSRN--FLRRVHSHVSRLPSLRCLGMNHNQ 256

Query: 305 VHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIP 358
           +  + +      +  +  LES H    P   G  F  R  +I    F G   IP
Sbjct: 257 ISFVPHQIGDCSKLEILGLESNHLTQLPPELGKLFTLRELYIGKNRFSGARCIP 310



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 67/218 (30%), Positives = 110/218 (50%), Gaps = 6/218 (2%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTL-IARNNLLTAESLPKDM 122
           HN +SF P      + L  L L +N +T LP  +   F L  L I +N    A  +P+ +
Sbjct: 254 HNQISFVPHQIGDCSKLEILGLESNHLTQLPPELGKLFTLRELYIGKNRFSGARCIPESL 313

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
           S L+NL V +++GNQ++  P+++    +L  + L  N LNH+P  +  L  + +L +  N
Sbjct: 314 SRLRNLTVLDVAGNQVKDLPLELKTASSLNEVKLSKNVLNHLPVALCSLVDVILLDVSDN 373

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            L  IP    +L  L  +ILS N  +  P  + ++  L+ +   NN + T+P EI  LK 
Sbjct: 374 KLKCIPRDIRNLSSLRKIILSRNNFKQFPTELCHVTQLEEINFSNNLISTIPREISFLKR 433

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L+E    + + +NK +  P E+  +  L  L +  N L
Sbjct: 434 LTE----IDISHNKFQQFPRELCGVVGLRALDVSGNQL 467



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 112/219 (51%), Gaps = 12/219 (5%)

Query: 83  SLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           +LD+ N  +  +P+ + +   L  L+A NN L  + +P D+  L  L+  +L GN L   
Sbjct: 20  TLDIRN--LNEVPKEVFDITELQCLVANNNKL--KEIPSDVRKLSCLQAISLRGNALTSL 75

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P  + D+  L+YL   +N +  +P  I  L  L  L    N LT++P     L+QLE L 
Sbjct: 76  PESLCDLKYLEYLECSDNQIKSLPHRIGNLKNLIQLYANRNCLTELPVGISYLWQLEVLG 135

Query: 202 LSDNQLESLPASISN-LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
           L+ N++  LP  +   L+ ++ L L NN L  LPT I    C   KL  L L  NK+ +L
Sbjct: 136 LNGNRITHLPIEMGQFLEQIRILGLSNNCLNALPTAI----CRMRKLVKLGLSGNKISSL 191

Query: 261 PTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELA 299
           P+ I  L+ L +L L DN L  RF+    +   SL ELA
Sbjct: 192 PSTIRRLESLIDLRLDDNRL--RFLPSQLFTLKSLEELA 228



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 92/281 (32%), Positives = 133/281 (47%), Gaps = 30/281 (10%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           +K   +  + L  N L+  P++      L  L+ S+N+I  LP  I N   L  L A  N
Sbjct: 57  RKLSCLQAISLRGNALTSLPESLCDLKYLEYLECSDNQIKSLPHRIGNLKNLIQLYANRN 116

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILD-IPTLKYLYLGNNSLNHVPREINK 170
            LT   LP  +S L  L+V  L+GN++   PI++   +  ++ L L NN LN +P  I +
Sbjct: 117 CLT--ELPVGISYLWQLEVLGLNGNRITHLPIEMGQFLEQIRILGLSNNCLNALPTAICR 174

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           + KL  L L GN ++ +P T   L  L  L L DN+L  LP+ +  LK L+ L L  N L
Sbjct: 175 MRKLVKLGLSGNKISSLPSTIRRLESLIDLRLDDNRLRFLPSQLFTLKSLEELALSRNFL 234

Query: 231 RTLPTEII---TLKCLS----------------EKLKSLLLHNNKLRTLPTEIITLKCLS 271
           R + + +    +L+CL                  KL+ L L +N L  LP E+  L  L 
Sbjct: 235 RRVHSHVSRLPSLRCLGMNHNQISFVPHQIGDCSKLEILGLESNHLTQLPPELGKLFTLR 294

Query: 272 ELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQ 312
           EL +  N    RF S     P SL  L  R L V ++  +Q
Sbjct: 295 ELYIGKN----RF-SGARCIPESLSRL--RNLTVLDVAGNQ 328



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 117/253 (46%), Gaps = 35/253 (13%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTL--IARNNLL 113
            N+  L +  N +   P      ++L  + LS N + HLP A+ +     L  ++ N L 
Sbjct: 317 RNLTVLDVAGNQVKDLPLELKTASSLNEVKLSKNVLNHLPVALCSLVDVILLDVSDNKL- 375

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREIN---- 169
             + +P+D+ NL +L+   LS N  +QFP ++  +  L+ +   NN ++ +PREI+    
Sbjct: 376 --KCIPRDIRNLSSLRKIILSRNNFKQFPTELCHVTQLEEINFSNNLISTIPREISFLKR 433

Query: 170 ----------------KLC---KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
                           +LC    L  L + GN LTDIP  F     LE L LSDNQ +  
Sbjct: 434 LTEIDISHNKFQQFPRELCGVVGLRALDVSGNQLTDIPYEFKFFENLERLNLSDNQFDEF 493

Query: 211 PASISNLKMLKSLLLH---NNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITL 267
           P  +  +  LK L        KL  +P  I    C  E L+++ L +N+++ LP  I   
Sbjct: 494 PIRVCFVTTLKELHFDQKCGRKLELVPEHI----CELEHLENISLDHNQIQNLPESISNC 549

Query: 268 KCLSELSLRDNPL 280
           + L +LS+  N L
Sbjct: 550 RSLRKLSVVGNVL 562



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 78/265 (29%), Positives = 114/265 (43%), Gaps = 32/265 (12%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           QI+ LP+   N K  N+  L    N L+  P   S    L  L L+ NRITHLP  +  F
Sbjct: 94  QIKSLPHRIGNLK--NLIQLYANRNCLTELPVGISYLWQLEVLGLNGNRITHLPIEMGQF 151

Query: 102 ---------------PLSTLIARNNLLTA--------ESLPKDMSNLKNLKVFNLSGNQL 138
                           L T I R   L           SLP  +  L++L    L  N+L
Sbjct: 152 LEQIRILGLSNNCLNALPTAICRMRKLVKLGLSGNKISSLPSTIRRLESLIDLRLDDNRL 211

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
              P Q+  + +L+ L L  N L  V   +++L  L  L +  N ++ +P   GD  +LE
Sbjct: 212 RFLPSQLFTLKSLEELALSRNFLRRVHSHVSRLPSLRCLGMNHNQISFVPHQIGDCSKLE 271

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKL---RTLPTEIITLKCLSEKLKSLLLHNN 255
            L L  N L  LP  +  L  L+ L +  N+    R +P  +  L+     L  L +  N
Sbjct: 272 ILGLESNHLTQLPPELGKLFTLRELYIGKNRFSGARCIPESLSRLR----NLTVLDVAGN 327

Query: 256 KLRTLPTEIITLKCLSELSLRDNPL 280
           +++ LP E+ T   L+E+ L  N L
Sbjct: 328 QVKDLPLELKTASSLNEVKLSKNVL 352



 Score = 46.2 bits (108), Expect = 0.025,   Method: Compositional matrix adjust.
 Identities = 40/149 (26%), Positives = 75/149 (50%), Gaps = 13/149 (8%)

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           ++L   +L ++P    D+ +L+ L+ ++N+L+ +P+ +  L  L+++ L  N L +LP  
Sbjct: 19  VTLDIRNLNEVPKEVFDITELQCLVANNNKLKEIPSDVRKLSCLQAISLRGNALTSLPES 78

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
           +  LK     L+ L   +N++++LP  I  LK L +L    N L     +++      L 
Sbjct: 79  LCDLK----YLEYLECSDNQIKSLPHRIGNLKNLIQLYANRNCL-----TELPVGISYLW 129

Query: 297 ELASRTLKVHEIDYSQEHLPQNLVQYLES 325
           +L    L  + I     HLP  + Q+LE 
Sbjct: 130 QLEVLGLNGNRIT----HLPIEMGQFLEQ 154



 Score = 41.6 bits (96), Expect = 0.65,   Method: Compositional matrix adjust.
 Identities = 33/123 (26%), Positives = 56/123 (45%), Gaps = 27/123 (21%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
             ++EL+P  ++  + E+++ + L HN +   P++ S   +LR L +  N +  LP++I 
Sbjct: 513 GRKLELVP--EHICELEHLENISLDHNQIQNLPESISNCRSLRKLSVVGNVLEKLPESIC 570

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIP-TLKYLYLGN 158
             P                        NLK  +L GNQL + P QI  +   L ++ LG 
Sbjct: 571 ELP------------------------NLKSLDLKGNQLTELPTQIHRLEKQLSHISLGE 606

Query: 159 NSL 161
           N L
Sbjct: 607 NPL 609


>gi|344264787|ref|XP_003404471.1| PREDICTED: leucine-rich repeat-containing protein 1 [Loxodonta
           africana]
          Length = 524

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 102/316 (32%), Positives = 158/316 (50%), Gaps = 29/316 (9%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I  LP++I     L  L    N L+ 
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALVHLKDLWLDGNQLS- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLK+L   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 211 -ELPQEIGNLKSLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +P+  GD   L  L+L++N+L +LP SI  LK L +L    NKL +LP 
Sbjct: 270 ILKVDQNRLTQLPEATGDCESLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPK 329

Query: 236 EI-----ITLKCLSE--------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           EI     +T+ C+ +              +L  L +  N+L  LP  + TLK L  L L 
Sbjct: 330 EIGGCCSLTVFCVRDNRLTRIPAELSQATELHVLDVAGNRLLHLPLSLTTLK-LKALWLS 388

Query: 277 DN---PLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPK 333
           DN   PL+  F +D  +     +       ++      QE+LP+     LES  + V+ +
Sbjct: 389 DNQSQPLLT-FQTDTDHTTGEKILTCVLLPQLPSEPTCQENLPR--CGALESLVNDVSDE 445

Query: 334 CKGVFFDNRIEHIKFV 349
                  NR+  I+F+
Sbjct: 446 AWNERAVNRVSAIRFL 461



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/224 (36%), Positives = 116/224 (51%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN++  
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVRLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDI-- 94

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+ +S  K L++ + SGN L + P    ++  L  L + + SL  +P  I  L  L
Sbjct: 95  -PEIPESISFCKALQIADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNL 153

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +PD+   L +LE L L +N++ SLP SI  L  LK L L  N+L  LP
Sbjct: 154 ASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALVHLKDLWLDGNQLSELP 213

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK     L  L +  N+L  LP EI  L  L++L +  N
Sbjct: 214 QEIGNLK----SLLCLDVSENRLERLPEEISGLTSLTDLVISQN 253



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 125/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N++   P++ S    L+  D S N +T LP++  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 126 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            +  +P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 185 EIYSLPESIGALVHLKDLWLDGNQLSELPQEIGNLKSLLCLDVSENRLERLPEEISGLTS 244

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTL 260
           L  L++  N L T+P  I  LK LS                   E L  L+L  N+L TL
Sbjct: 245 LTDLVISQNLLETIPDGIGKLKKLSILKVDQNRLTQLPEATGDCESLTELVLTENRLLTL 304

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK LS L+   N LV
Sbjct: 305 PKSIGKLKKLSNLNADRNKLV 325



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 8/203 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ S+D  +  + ++P+ I  +   L  L+   N L    LP+    L  L+   LS N+
Sbjct: 13  HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQL--RELPEQFFQLVRLRKLGLSDNE 70

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           +++ P +I +   L  L +  N +  +P  I+    L +    GN LT +P++F +L  L
Sbjct: 71  IQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQIADFSGNPLTRLPESFPELQNL 130

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
             L ++D  L+SLP +I NL  L SL L  N L  LP  +  L+    +L+ L L NN++
Sbjct: 131 TCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLR----RLEELDLGNNEI 186

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
            +LP  I  L  L +L L  N L
Sbjct: 187 YSLPESIGALVHLKDLWLDGNQL 209


>gi|398341376|ref|ZP_10526079.1| leucine-rich repeat protein [Leptospira kirschneri serovar Bim str.
           1051]
          Length = 310

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 93/217 (42%), Positives = 117/217 (53%), Gaps = 7/217 (3%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
            N L  FP    +  NLR+L L+NN++T L + I     L TL   NN LT  +LPK + 
Sbjct: 80  ENPLGAFPKVIGQLQNLRALYLNNNQLTTLSKEIGQLQNLRTLYLNNNQLT--TLPKVIG 137

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            L+NL+   L  NQL   P +I  +  L+ LYL NN L  V +EI KL  L  L L  N 
Sbjct: 138 QLQNLRTLYLFNNQLTTLPKEIGQLQNLRALYLNNNQLTTVSKEIGKLKNLEWLELSYNQ 197

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT +P+    L  L+ L L +N+   LP  I  LK LK L L+ N+L TLP EI  LK L
Sbjct: 198 LTALPEEIEQLQNLQELDLYNNKFTILPQEIGQLKNLKKLNLNANQLTTLPNEIGQLKNL 257

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            E    L L NN+L TLP EI  L+ L  L L +N L
Sbjct: 258 RE----LSLSNNQLTTLPKEIEQLQNLQWLYLNNNQL 290



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 77/189 (40%), Positives = 99/189 (52%), Gaps = 5/189 (2%)

Query: 94  LPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKY 153
           L +AI N PL   +   N      LPK++  LKNL   NL  N L  FP  I  +  L+ 
Sbjct: 40  LTKAIQN-PLDVRVLDLNGQKLTILPKEIGQLKNLYDLNLDENPLGAFPKVIGQLQNLRA 98

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           LYL NN L  + +EI +L  L  L L  N LT +P   G L  L  L L +NQL +LP  
Sbjct: 99  LYLNNNQLTTLSKEIGQLQNLRTLYLNNNQLTTLPKVIGQLQNLRTLYLFNNQLTTLPKE 158

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           I  L+ L++L L+NN+L T+  EI  LK     L+ L L  N+L  LP EI  L+ L EL
Sbjct: 159 IGQLQNLRALYLNNNQLTTVSKEIGKLK----NLEWLELSYNQLTALPEEIEQLQNLQEL 214

Query: 274 SLRDNPLVI 282
            L +N   I
Sbjct: 215 DLYNNKFTI 223



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 88/226 (38%), Positives = 114/226 (50%), Gaps = 30/226 (13%)

Query: 80  NLRSLDLSNNRITHLPQAITN----------------FP--------LSTLIARNNLLTA 115
           ++R LDL+  ++T LP+ I                  FP        L  L   NN LT 
Sbjct: 49  DVRVLDLNGQKLTILPKEIGQLKNLYDLNLDENPLGAFPKVIGQLQNLRALYLNNNQLT- 107

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +L K++  L+NL+   L+ NQL   P  I  +  L+ LYL NN L  +P+EI +L  L 
Sbjct: 108 -TLSKEIGQLQNLRTLYLNNNQLTTLPKVIGQLQNLRTLYLFNNQLTTLPKEIGQLQNLR 166

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +    G L  LE L LS NQL +LP  I  L+ L+ L L+NNK   LP 
Sbjct: 167 ALYLNNNQLTTVSKEIGKLKNLEWLELSYNQLTALPEEIEQLQNLQELDLYNNKFTILPQ 226

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           EI       + LK L L+ N+L TLP EI  LK L ELSL +N L 
Sbjct: 227 EI----GQLKNLKKLNLNANQLTTLPNEIGQLKNLRELSLSNNQLT 268



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 74/184 (40%), Positives = 102/184 (55%), Gaps = 3/184 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L +N L+  P    +  NLR+L L NN++T LP+ I     L  L   NN LT
Sbjct: 117 QNLRTLYLNNNQLTTLPKVIGQLQNLRTLYLFNNQLTTLPKEIGQLQNLRALYLNNNQLT 176

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             S  K++  LKNL+   LS NQL   P +I  +  L+ L L NN    +P+EI +L  L
Sbjct: 177 TVS--KEIGKLKNLEWLELSYNQLTALPEEIEQLQNLQELDLYNNKFTILPQEIGQLKNL 234

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+L  N LT +P+  G L  L  L LS+NQL +LP  I  L+ L+ L L+NN+L +  
Sbjct: 235 KKLNLNANQLTTLPNEIGQLKNLRELSLSNNQLTTLPKEIEQLQNLQWLYLNNNQLSSEE 294

Query: 235 TEII 238
            E I
Sbjct: 295 KERI 298



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 64/168 (38%), Positives = 89/168 (52%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V +L+G +L   P +I  +  L  L L  N L   P+ I +L  
Sbjct: 36  TYMDLTKAIQNPLDVRVLDLNGQKLTILPKEIGQLKNLYDLNLDENPLGAFPKVIGQLQN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT +    G L  L  L L++NQL +LP  I  L+ L++L L NN+L TL
Sbjct: 96  LRALYLNNNQLTTLSKEIGQLQNLRTLYLNNNQLTTLPKVIGQLQNLRTLYLFNNQLTTL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L    + L++L L+NN+L T+  EI  LK L  L L  N L 
Sbjct: 156 PKEIGQL----QNLRALYLNNNQLTTVSKEIGKLKNLEWLELSYNQLT 199



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/127 (37%), Positives = 72/127 (56%), Gaps = 7/127 (5%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN-NL 112
           K +N++ L L +N L+  P+   +  NL+ LDL NN+ T LPQ I        +  N N 
Sbjct: 184 KLKNLEWLELSYNQLTALPEEIEQLQNLQELDLYNNKFTILPQEIGQLKNLKKLNLNANQ 243

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INKL 171
           LT  +LP ++  LKNL+  +LS NQL   P +I  +  L++LYL NN L+   +E I KL
Sbjct: 244 LT--TLPNEIGQLKNLRELSLSNNQLTTLPKEIEQLQNLQWLYLNNNQLSSEEKERIRKL 301

Query: 172 ---CKLH 175
              C+++
Sbjct: 302 LPKCQIY 308


>gi|392966514|ref|ZP_10331933.1| putative serine/threonine-protein kinase pats1 [Fibrisoma limi BUZ
           3]
 gi|387845578|emb|CCH53979.1| putative serine/threonine-protein kinase pats1 [Fibrisoma limi BUZ
           3]
          Length = 925

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/202 (39%), Positives = 107/202 (52%), Gaps = 7/202 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L LY N L+  P++  + T L  L L +N++  LP++I+    L++L   +N L    LP
Sbjct: 46  LYLYDNQLTILPESIGQLTQLTRLSLHDNQLAVLPESISQLTQLTSLSLHDNQLAV--LP 103

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
           + +S L  L   +LS NQL   P  I  +  L  L L  N L  +P  I +L +L  L L
Sbjct: 104 ESISQLTQLTELDLSTNQLTVLPESIGQLNQLTRLDLHTNQLTVLPESIGQLTQLTRLDL 163

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N LTD+P++ G L QL  L L +NQL  LP SI  L  L  L L NN+L TLP  I  
Sbjct: 164 SNNQLTDLPESIGQLTQLTELDLPNNQLTDLPESIGQLTQLTELDLRNNELTTLPESIGQ 223

Query: 240 LKCLSEKLKSLLLHNNKLRTLP 261
           L     +L+ L LH N+L  LP
Sbjct: 224 LT----QLRELSLHTNELTVLP 241



 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 87/217 (40%), Positives = 112/217 (51%), Gaps = 7/217 (3%)

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNL 125
           NLS  P++  + T L  L L +N++T LP++I     L+ L   +N L    LP+ +S L
Sbjct: 29  NLSSLPESIGQLTQLTRLYLYDNQLTILPESIGQLTQLTRLSLHDNQLAV--LPESISQL 86

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
             L   +L  NQL   P  I  +  L  L L  N L  +P  I +L +L  L L  N LT
Sbjct: 87  TQLTSLSLHDNQLAVLPESISQLTQLTELDLSTNQLTVLPESIGQLNQLTRLDLHTNQLT 146

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
            +P++ G L QL  L LS+NQL  LP SI  L  L  L L NN+L  LP  I  L  L+E
Sbjct: 147 VLPESIGQLTQLTRLDLSNNQLTDLPESIGQLTQLTELDLPNNQLTDLPESIGQLTQLTE 206

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
               L L NN+L TLP  I  L  L ELSL  N L +
Sbjct: 207 ----LDLRNNELTTLPESIGQLTQLRELSLHTNELTV 239



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 69/189 (36%), Positives = 101/189 (53%), Gaps = 3/189 (1%)

Query: 60  TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESL 118
           +L L+ N L+  P++ S+ T L  LDLS N++T LP++I     L+ L    N LT   L
Sbjct: 91  SLSLHDNQLAVLPESISQLTQLTELDLSTNQLTVLPESIGQLNQLTRLDLHTNQLTV--L 148

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P+ +  L  L   +LS NQL   P  I  +  L  L L NN L  +P  I +L +L  L 
Sbjct: 149 PESIGQLTQLTRLDLSNNQLTDLPESIGQLTQLTELDLPNNQLTDLPESIGQLTQLTELD 208

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           L  N LT +P++ G L QL  L L  N+L  LP S+ +L +L+ L L  N    +P E+I
Sbjct: 209 LRNNELTTLPESIGQLTQLRELSLHTNELTVLPKSLQHLTLLRLLDLRGNTDLGIPPEVI 268

Query: 239 TLKCLSEKL 247
             +  S+++
Sbjct: 269 EDRFDSDRI 277



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 64/171 (37%), Positives = 86/171 (50%), Gaps = 9/171 (5%)

Query: 116 ESLPKDMSNLKNLK-----VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
           +S+ + +  +KN +     + +LSG  L   P  I  +  L  LYL +N L  +P  I +
Sbjct: 3   DSMREALRRIKNTRSKLSEILDLSGLNLSSLPESIGQLTQLTRLYLYDNQLTILPESIGQ 62

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L +L  LSL  N L  +P++   L QL +L L DNQL  LP SIS L  L  L L  N+L
Sbjct: 63  LTQLTRLSLHDNQLAVLPESISQLTQLTSLSLHDNQLAVLPESISQLTQLTELDLSTNQL 122

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             LP  I  L     +L  L LH N+L  LP  I  L  L+ L L +N L 
Sbjct: 123 TVLPESIGQLN----QLTRLDLHTNQLTVLPESIGQLTQLTRLDLSNNQLT 169


>gi|456825485|gb|EMF73881.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 405

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 81/190 (42%), Positives = 103/190 (54%), Gaps = 7/190 (3%)

Query: 69  SFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKN 127
           +  P   ++  NL+ L L  NR+T LP+ I     L  L    N LT   LPK++  LKN
Sbjct: 202 TILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTI--LPKEIGQLKN 259

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           L V +LSGNQL   P +I  +  L+ L L  N     P+EI +   L VL L  N LT +
Sbjct: 260 LLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRLTIL 319

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
           P+  G L  L+ L LS NQL +LP  I  L+ L+SL L +N+L TLP EI  LK     L
Sbjct: 320 PEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLK----NL 375

Query: 248 KSLLLHNNKL 257
           K L LHNN L
Sbjct: 376 KKLYLHNNPL 385



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/250 (35%), Positives = 129/250 (51%), Gaps = 24/250 (9%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP---LSTLIARN 110
           K +N+  L L+ N L+  P    +  NL+ L LS NR+T LP+ I         +L  +N
Sbjct: 139 KLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKN 198

Query: 111 NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
              T   LPK+++ L+NL+  +L  N+L   P +I  +  L+ L L  N L  +P+EI +
Sbjct: 199 KPFTI--LPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTILPKEIGQ 256

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L VL L GN LT +P     L  L+ L L  N+ E+ P  I+  + L+ L L+ N+L
Sbjct: 257 LKNLLVLDLSGNQLTILPKEITQLQNLQELNLEYNRFEAFPKEITQFQNLQVLDLYQNRL 316

Query: 231 RTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLS 271
             LP EI  L+ L                    +KL+SL L +N+L TLP EI  LK L 
Sbjct: 317 TILPEEIGQLQNLQKLHLSRNQLTTLPKEIGRLQKLESLGLDHNQLATLPEEIKQLKNLK 376

Query: 272 ELSLRDNPLV 281
           +L L +NPL+
Sbjct: 377 KLYLHNNPLL 386



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 87/226 (38%), Positives = 118/226 (52%), Gaps = 9/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L   +N L+  P    K  NL+ L L NN++T LP+ I     L  L   NN LT
Sbjct: 72  QNLQILNSENNQLTTLPKEIGKLQNLQELHLQNNQLTTLPEEIGQLQNLKVLHLNNNQLT 131

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+++  L+NL+  NL  N+L   P +I  +  L+ LYL  N L  +P EI +L  L
Sbjct: 132 --TLPEEIGKLQNLQELNLFVNRLNILPKEIGRLQNLQELYLSLNRLTILPEEIGQLESL 189

Query: 175 HVLSLGGNS--LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
             LSLGG +   T +P     L  L+ L L  N+L  LP  I  L+ L+ L L+ N+L  
Sbjct: 190 RKLSLGGKNKPFTILPKEITQLQNLQELHLKFNRLTVLPKEIGQLQNLRILDLYQNRLTI 249

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           LP EI  LK L      L L  N+L  LP EI  L+ L EL+L  N
Sbjct: 250 LPKEIGQLKNLL----VLDLSGNQLTILPKEITQLQNLQELNLEYN 291



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/233 (37%), Positives = 120/233 (51%), Gaps = 9/233 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K P  +  L L  + L   P    +  NL+ L+  NN++T LP+ I     L  L  +NN
Sbjct: 46  KNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQLTTLPKEIGKLQNLQELHLQNN 105

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  +LP+++  L+NLKV +L+ NQL   P +I  +  L+ L L  N LN +P+EI +L
Sbjct: 106 QLT--TLPEEIGQLQNLKVLHLNNNQLTTLPEEIGKLQNLQELNLFVNRLNILPKEIGRL 163

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILS--DNQLESLPASISNLKMLKSLLLHNNK 229
             L  L L  N LT +P+  G L  L  L L   +     LP  I+ L+ L+ L L  N+
Sbjct: 164 QNLQELYLSLNRLTILPEEIGQLESLRKLSLGGKNKPFTILPKEITQLQNLQELHLKFNR 223

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           L  LP EI  L    + L+ L L+ N+L  LP EI  LK L  L L  N L I
Sbjct: 224 LTVLPKEIGQL----QNLRILDLYQNRLTILPKEIGQLKNLLVLDLSGNQLTI 272



 Score = 47.4 bits (111), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 4/110 (3%)

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L + H       S T++ +   +  ++  L LS ++L+ LP  I  L+ L+ L   NN+L
Sbjct: 25  LTQFHAEENHKGSYTNLTEALKNPNEVRILDLSRSKLKILPKEIGQLQNLQILNSENNQL 84

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            TLP EI  L+ L E    L L NN+L TLP EI  L+ L  L L +N L
Sbjct: 85  TTLPKEIGKLQNLQE----LHLQNNQLTTLPEEIGQLQNLKVLHLNNNQL 130


>gi|421090274|ref|ZP_15551069.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
 gi|410000955|gb|EKO51580.1| leucine rich repeat protein [Leptospira kirschneri str. 200802841]
          Length = 313

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/229 (36%), Positives = 121/229 (52%), Gaps = 7/229 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N L+  P    +   LR L+L++N++T LP+ +     L  L   +N  T
Sbjct: 68  QNLEKLNLVGNQLTSLPKEIGRLQKLRVLNLAHNQLTSLPKEMELLQNLEILNLDDNEFT 127

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             S PK+   L+ L++ NL+GNQL   P ++  +  L+ L L  N    +P+E+  L  L
Sbjct: 128 --SFPKETRQLQKLRILNLAGNQLTSLPKEMELLQNLERLDLAGNRFKILPKEMELLQNL 185

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+LG N  T  P        L+ L LS NQL++L   I  L+ L+SL L  N+L ++P
Sbjct: 186 EALNLGHNQFTSFPKEIRRQQNLKWLYLSRNQLKTLSKEIVELQNLQSLHLDGNQLSSIP 245

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
            EI  L+ L E    L L NNKL+TLP EI  L+ L  L L  NP   +
Sbjct: 246 KEIGQLQNLFE----LNLQNNKLKTLPKEIGLLQNLQVLRLYSNPFSFK 290



 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/214 (38%), Positives = 112/214 (52%), Gaps = 7/214 (3%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLK 126
           L   P     F NL  L+L  N++T LP+ I     L  L   +N LT  SLPK+M  L+
Sbjct: 57  LDSLPRVIGLFQNLEKLNLVGNQLTSLPKEIGRLQKLRVLNLAHNQLT--SLPKEMELLQ 114

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL++ NL  N+   FP +   +  L+ L L  N L  +P+E+  L  L  L L GN    
Sbjct: 115 NLEILNLDDNEFTSFPKETRQLQKLRILNLAGNQLTSLPKEMELLQNLERLDLAGNRFKI 174

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P     L  LEAL L  NQ  S P  I   + LK L L  N+L+TL  EI+ L    + 
Sbjct: 175 LPKEMELLQNLEALNLGHNQFTSFPKEIRRQQNLKWLYLSRNQLKTLSKEIVEL----QN 230

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L+SL L  N+L ++P EI  L+ L EL+L++N L
Sbjct: 231 LQSLHLDGNQLSSIPKEIGQLQNLFELNLQNNKL 264



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 4/138 (2%)

Query: 145 ILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD 204
           IL++     + +G + L+ +PR I     L  L+L GN LT +P   G L +L  L L+ 
Sbjct: 41  ILEMSMSTGVSMGLHELDSLPRVIGLFQNLEKLNLVGNQLTSLPKEIGRLQKLRVLNLAH 100

Query: 205 NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           NQL SLP  +  L+ L+ L L +N+  + P E   L    +KL+ L L  N+L +LP E+
Sbjct: 101 NQLTSLPKEMELLQNLEILNLDDNEFTSFPKETRQL----QKLRILNLAGNQLTSLPKEM 156

Query: 265 ITLKCLSELSLRDNPLVI 282
             L+ L  L L  N   I
Sbjct: 157 ELLQNLERLDLAGNRFKI 174


>gi|395540076|ref|XP_003771986.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Sarcophilus harrisii]
          Length = 908

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 84/238 (35%), Positives = 125/238 (52%), Gaps = 19/238 (7%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L  NNLSFF D   +  NL  L+LS N+I+ +P +I+N   L  LI   N    E  P
Sbjct: 563 LELSQNNLSFFSDYICRLFNLDYLNLSKNKISQVPPSISNMTSLRVLILNGN--NFEIFP 620

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
           K++  L+NL++ +LS NQ++  P +I ++  ++ L   +N     P E+  L  L  L L
Sbjct: 621 KELCTLENLQILDLSENQIQYVPSEIRNLQAIQNLDFSSNRFGSFPIELCHLSTLKELQL 680

Query: 180 ---GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
               G+ LT +PD   +L QLE L +S N ++ LP +I  LK L +   +NN +  LP  
Sbjct: 681 CQKNGSKLTQVPDELSNLTQLEILDISHNTIKELPKNIGELKNLVTFKANNNLIGLLPLS 740

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPS 294
             +L     KL+ L +  N+L TLP  +  L  L E++  +NPLV         KPP+
Sbjct: 741 FESLN----KLQHLNMSGNRLTTLPNSLNNLSSLREINFDENPLV---------KPPA 785



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 66/222 (29%), Positives = 116/222 (52%), Gaps = 7/222 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           ++ L L  N L   P N  +  NLR+L ++ N+I  +   I++   L  L    N +   
Sbjct: 445 LECLSLSDNALEIIPGNIHRLRNLRALYINRNKIMAINVNISHMKYLKVLEFSGNAIKG- 503

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            +P ++ N   ++  +LS N+++ FP+ +  +  L+YL L  N L+ +P +++   +L  
Sbjct: 504 -IPIEIKNCNQIRKMDLSFNKIQDFPVGLCALSFLEYLNLNGNDLSEIPLDLSFSRQLIH 562

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N+L+   D    L+ L+ L LS N++  +P SISN+  L+ L+L+ N     P E
Sbjct: 563 LELSQNNLSFFSDYICRLFNLDYLNLSKNKISQVPPSISNMTSLRVLILNGNNFEIFPKE 622

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           + TL    E L+ L L  N+++ +P+EI  L+ +  L    N
Sbjct: 623 LCTL----ENLQILDLSENQIQYVPSEIRNLQAIQNLDFSSN 660



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 84/249 (33%), Positives = 125/249 (50%), Gaps = 7/249 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L + HN+++  P   S+   LR L L NN+    P  + +   L TL    N L  
Sbjct: 260 NLCVLNVCHNHIASLPTEISQLVWLRQLFLDNNKFLEFPTILGSLEKLETLSLSGNGL-- 317

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           + LP+ M+N+KNL V +L+ NQ   FP  +  +  L  L +  N ++ +P+EI +L  L 
Sbjct: 318 KRLPEMMANMKNLMVLDLNSNQFSIFPNIVCYLTKLIKLSVSKNLISSLPKEIKQLKNLE 377

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +P     L +L+ L L DN+LESL  +I N K LK L L  N L+ L  
Sbjct: 378 ELFLNHNKLTFLPVQIFRLLKLKRLHLLDNKLESLSHNIENFKELKVLQLDKNLLKQLNK 437

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
           EI +      KL+ L L +N L  +P  I  L+ L  L +  N ++   V+    K   +
Sbjct: 438 EIYS----CAKLECLSLSDNALEIIPGNIHRLRNLRALYINRNKIMAINVNISHMKYLKV 493

Query: 296 LELASRTLK 304
           LE +   +K
Sbjct: 494 LEFSGNAIK 502



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 115/249 (46%), Gaps = 30/249 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           E ++TL L  N L   P+  +   NL  LDL++N+ +  P  +     L  L    NL++
Sbjct: 305 EKLETLSLSGNGLKRLPEMMANMKNLMVLDLNSNQFSIFPNIVCYLTKLIKLSVSKNLIS 364

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQIL-----------------------DIPTL 151
             SLPK++  LKNL+   L+ N+L   P+QI                        +   L
Sbjct: 365 --SLPKEIKQLKNLEELFLNHNKLTFLPVQIFRLLKLKRLHLLDNKLESLSHNIENFKEL 422

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           K L L  N L  + +EI    KL  LSL  N+L  IP     L  L AL ++ N++ ++ 
Sbjct: 423 KVLQLDKNLLKQLNKEIYSCAKLECLSLSDNALEIIPGNIHRLRNLRALYINRNKIMAIN 482

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
            +IS++K LK L    N ++ +P EI        +++ + L  NK++  P  +  L  L 
Sbjct: 483 VNISHMKYLKVLEFSGNAIKGIPIEIKN----CNQIRKMDLSFNKIQDFPVGLCALSFLE 538

Query: 272 ELSLRDNPL 280
            L+L  N L
Sbjct: 539 YLNLNGNDL 547



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 63/215 (29%), Positives = 100/215 (46%), Gaps = 2/215 (0%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNL 125
           N +   P        +R +DLS N+I   P  +        +  N    +E +P D+S  
Sbjct: 499 NAIKGIPIEIKNCNQIRKMDLSFNKIQDFPVGLCALSFLEYLNLNGNDLSE-IPLDLSFS 557

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           + L    LS N L  F   I  +  L YL L  N ++ VP  I+ +  L VL L GN+  
Sbjct: 558 RQLIHLELSQNNLSFFSDYICRLFNLDYLNLSKNKISQVPPSISNMTSLRVLILNGNNFE 617

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
             P     L  L+ L LS+NQ++ +P+ I NL+ +++L   +N+  + P E+  L  L E
Sbjct: 618 IFPKELCTLENLQILDLSENQIQYVPSEIRNLQAIQNLDFSSNRFGSFPIELCHLSTLKE 677

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            L+    + +KL  +P E+  L  L  L +  N +
Sbjct: 678 -LQLCQKNGSKLTQVPDELSNLTQLEILDISHNTI 711



 Score = 64.7 bits (156), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 55/157 (35%), Positives = 77/157 (49%), Gaps = 6/157 (3%)

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           +N +V  +S N L++FP  +     +KYLYL  N +     E N +  L +LS+  N L 
Sbjct: 192 ENFRVRLISKN-LQKFPKGLFKTQDVKYLYLDKNKIKTFEVEPN-MASLELLSMKENELI 249

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
            +P     L  L  L +  N + SLP  IS L  L+ L L NNK    PT + +L    E
Sbjct: 250 ALPPEIKLLSNLCVLNVCHNHIASLPTEISQLVWLRQLFLDNNKFLEFPTILGSL----E 305

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           KL++L L  N L+ LP  +  +K L  L L  N   I
Sbjct: 306 KLETLSLSGNGLKRLPEMMANMKNLMVLDLNSNQFSI 342



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 67/139 (48%), Gaps = 6/139 (4%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           L+  PD  S  T L  LD+S+N I  LP+ I     L T  A NNL+    LP    +L 
Sbjct: 688 LTQVPDELSNLTQLEILDISHNTIKELPKNIGELKNLVTFKANNNLIGL--LPLSFESLN 745

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
            L+  N+SGN+L   P  + ++ +L+ +    N L   P EI   CK  VL++ G+ L  
Sbjct: 746 KLQHLNMSGNRLTTLPNSLNNLSSLREINFDENPLVKPPAEI---CKGKVLNVIGHYLQK 802

Query: 187 IPDTFGDLYQLEALILSDN 205
             D    + Q    I+S N
Sbjct: 803 AEDRDEKILQKLFRIVSRN 821


>gi|260788660|ref|XP_002589367.1| hypothetical protein BRAFLDRAFT_77813 [Branchiostoma floridae]
 gi|229274544|gb|EEN45378.1| hypothetical protein BRAFLDRAFT_77813 [Branchiostoma floridae]
          Length = 762

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 127/253 (50%), Gaps = 23/253 (9%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L + +N L  FP    K   LR L +  N++T +P  + + P L  L   NN L+ 
Sbjct: 266 NLEVLDVGNNKLFTFPPGVEKLQKLRELYIYGNQLTEVPSGVRSLPNLEVLSVVNNKLS- 324

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            + P  +  L+ L    ++ NQL + P  +  +P L+ L +GNN L+  P  + KL KL 
Sbjct: 325 -TFPPGVEKLQKLTKLGINDNQLTEVPSGVCSLPNLELLVVGNNMLSTFPPGVEKLQKLR 383

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L + GN LT++P     L  LE L + +N+L + P  +  L+ L+ L +H+N+L  +P+
Sbjct: 384 ELRIYGNQLTEVPPGVCSLPNLEVLHVYNNKLSTFPPGVEKLQKLRELRIHDNQLTEVPS 443

Query: 236 EIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
            + +L  L                     KL+ L ++ N+L  +P+ + +L  L +LS+ 
Sbjct: 444 RVCSLPNLEVLTVGNNKVSTFPPGVEKLTKLRELYINGNQLTEVPSGVCSLPNLEKLSVG 503

Query: 277 DNPLVIRFVSDMT 289
            NP + R   D+T
Sbjct: 504 GNP-IRRLPDDVT 515



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 118/226 (52%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI-TNFPLSTLIARNNLLT 114
           + +  L ++ NNLS  PD      NL  L + +N++  LP  I +   L    A NN L+
Sbjct: 81  QGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKKLPTKIFSCLNLVNFDASNNNLS 140

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + P  +  L+ ++   + GNQL + P  +  +P L+ L +GNN L+  P  + KL KL
Sbjct: 141 --TFPPGVEKLQKVRELRIYGNQLTEVPSGVCSLPNLELLSVGNNKLSTFPPGVEKLQKL 198

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L + GN LT++P     L  LE+L  + N+  + P  +  L+ L  LL+H+N+L  +P
Sbjct: 199 RILYIYGNQLTEVPRGVCSLSNLESLEANGNKFSTFPLGVEKLQKLTRLLIHDNQLTEVP 258

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           + + +L      L+ L + NNKL T P  +  L+ L EL +  N L
Sbjct: 259 SGVCSLP----NLEVLDVGNNKLFTFPPGVEKLQKLRELYIYGNQL 300



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 113/223 (50%), Gaps = 7/223 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L++ +N LS FP    K   LR L +  N++T +P  + + P L  L   NN L+ 
Sbjct: 358 NLELLVVGNNMLSTFPPGVEKLQKLRELRIYGNQLTEVPPGVCSLPNLEVLHVYNNKLS- 416

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            + P  +  L+ L+   +  NQL + P ++  +P L+ L +GNN ++  P  + KL KL 
Sbjct: 417 -TFPPGVEKLQKLRELRIHDNQLTEVPSRVCSLPNLEVLTVGNNKVSTFPPGVEKLTKLR 475

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L + GN LT++P     L  LE L +  N +  LP  ++ L  LK+L + N +    P 
Sbjct: 476 ELYINGNQLTEVPSGVCSLPNLEKLSVGGNPIRRLPDDVTRLARLKALSVPNCQFDEFPR 535

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           +++ LK     L+ L     K   +P E+  L+ L  LSL  N
Sbjct: 536 QVLQLKT----LEVLYAGGCKFDMVPDEVGNLQHLCYLSLEYN 574



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 120/249 (48%), Gaps = 30/249 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L +Y+N LS FP    K   LR L + +N++T +P  + + P L  L   NN ++ 
Sbjct: 404 NLEVLHVYNNKLSTFPPGVEKLQKLRELRIHDNQLTEVPSRVCSLPNLEVLTVGNNKVS- 462

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            + P  +  L  L+   ++GNQL + P  +  +P L+ L +G N +  +P ++ +L +L 
Sbjct: 463 -TFPPGVEKLTKLRELYINGNQLTEVPSGVCSLPNLEKLSVGGNPIRRLPDDVTRLARLK 521

Query: 176 VLSL-----------------------GGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LS+                       GG     +PD  G+L  L  L L  N L +LP+
Sbjct: 522 ALSVPNCQFDEFPRQVLQLKTLEVLYAGGCKFDMVPDEVGNLQHLCYLSLEYNLLRTLPS 581

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSE 272
           ++S+L  L+ + L+ NK  T P  +  L  + EKL    + NN +  LPT +     L +
Sbjct: 582 TMSHLHNLRVVRLNKNKFDTFPEVLCELPAM-EKLD---ISNNNITRLPTALHRADKLRD 637

Query: 273 LSLRDNPLV 281
           L +  NPL 
Sbjct: 638 LDVSGNPLA 646



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/248 (30%), Positives = 121/248 (48%), Gaps = 22/248 (8%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNN 111
           +K + +  L +Y N L+  P      +NL SL+ + N+ +  P  +     L+ L+  +N
Sbjct: 193 EKLQKLRILYIYGNQLTEVPRGVCSLSNLESLEANGNKFSTFPLGVEKLQKLTRLLIHDN 252

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT   +P  + +L NL+V ++  N+L  FP  +  +  L+ LY+  N L  VP  +  L
Sbjct: 253 QLT--EVPSGVCSLPNLEVLDVGNNKLFTFPPGVEKLQKLRELYIYGNQLTEVPSGVRSL 310

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L VLS+  N L+  P     L +L  L ++DNQL  +P+ + +L  L+ L++ NN L 
Sbjct: 311 PNLEVLSVVNNKLSTFPPGVEKLQKLTKLGINDNQLTEVPSGVCSLPNLELLVVGNNMLS 370

Query: 232 TLPTEIITLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSE 272
           T P  +  L+ L E                    L+ L ++NNKL T P  +  L+ L E
Sbjct: 371 TFPPGVEKLQKLRELRIYGNQLTEVPPGVCSLPNLEVLHVYNNKLSTFPPGVEKLQKLRE 430

Query: 273 LSLRDNPL 280
           L + DN L
Sbjct: 431 LRIHDNQL 438



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 112/217 (51%), Gaps = 7/217 (3%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
           +NNLS FP    K   +R L +  N++T +P  + + P L  L   NN L+  + P  + 
Sbjct: 136 NNNLSTFPPGVEKLQKVRELRIYGNQLTEVPSGVCSLPNLELLSVGNNKLS--TFPPGVE 193

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            L+ L++  + GNQL + P  +  +  L+ L    N  +  P  + KL KL  L +  N 
Sbjct: 194 KLQKLRILYIYGNQLTEVPRGVCSLSNLESLEANGNKFSTFPLGVEKLQKLTRLLIHDNQ 253

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT++P     L  LE L + +N+L + P  +  L+ L+ L ++ N+L  +P+ + +L   
Sbjct: 254 LTEVPSGVCSLPNLEVLDVGNNKLFTFPPGVEKLQKLRELYIYGNQLTEVPSGVRSLP-- 311

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
              L+ L + NNKL T P  +  L+ L++L + DN L
Sbjct: 312 --NLEVLSVVNNKLSTFPPGVEKLQKLTKLGINDNQL 346



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 107/209 (51%), Gaps = 7/209 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L + +N +S FP    K T LR L ++ N++T +P  + + P L  L    N +  
Sbjct: 450 NLEVLTVGNNKVSTFPPGVEKLTKLRELYINGNQLTEVPSGVCSLPNLEKLSVGGNPI-- 507

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP D++ L  LK  ++   Q ++FP Q+L + TL+ LY G    + VP E+  L  L 
Sbjct: 508 RRLPDDVTRLARLKALSVPNCQFDEFPRQVLQLKTLEVLYAGGCKFDMVPDEVGNLQHLC 567

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            LSL  N L  +P T   L+ L  + L+ N+ ++ P  +  L  ++ L + NN +  LPT
Sbjct: 568 YLSLEYNLLRTLPSTMSHLHNLRVVRLNKNKFDTFPEVLCELPAMEKLDISNNNITRLPT 627

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
            +      ++KL+ L +  N L   P ++
Sbjct: 628 ALHR----ADKLRDLDVSGNPLAYPPQDV 652



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/217 (30%), Positives = 113/217 (52%), Gaps = 7/217 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L +  L+  P+     T+L +LD+SNN++T +P+AI     L  L A  N+LT  SLP+ 
Sbjct: 19  LSNQGLTSIPEEVFDITDLEALDVSNNKLTSIPEAIGRLQKLYRLDANGNMLT--SLPQA 76

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +S+L+ LK   +  N L + P  + D+  L++L++ +N L  +P +I     L       
Sbjct: 77  ISSLQGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKKLPTKIFSCLNLVNFDASN 136

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N+L+  P     L ++  L +  NQL  +P+ + +L  L+ L + NNKL T P  +  L 
Sbjct: 137 NNLSTFPPGVEKLQKVRELRIYGNQLTEVPSGVCSLPNLELLSVGNNKLSTFPPGVEKL- 195

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
              +KL+ L ++ N+L  +P  + +L  L  L    N
Sbjct: 196 ---QKLRILYIYGNQLTEVPRGVCSLSNLESLEANGN 229



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 70/252 (27%), Positives = 116/252 (46%), Gaps = 30/252 (11%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNN 111
           +K + +  L +Y N L+  P       NL  L + NN+++  P  +     L  L    N
Sbjct: 147 EKLQKVRELRIYGNQLTEVPSGVCSLPNLELLSVGNNKLSTFPPGVEKLQKLRILYIYGN 206

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPI-----------------------QILDI 148
            LT   +P+ + +L NL+    +GN+   FP+                        +  +
Sbjct: 207 QLT--EVPRGVCSLSNLESLEANGNKFSTFPLGVEKLQKLTRLLIHDNQLTEVPSGVCSL 264

Query: 149 PTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLE 208
           P L+ L +GNN L   P  + KL KL  L + GN LT++P     L  LE L + +N+L 
Sbjct: 265 PNLEVLDVGNNKLFTFPPGVEKLQKLRELYIYGNQLTEVPSGVRSLPNLEVLSVVNNKLS 324

Query: 209 SLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLK 268
           + P  +  L+ L  L +++N+L  +P+ + +L      L+ L++ NN L T P  +  L+
Sbjct: 325 TFPPGVEKLQKLTKLGINDNQLTEVPSGVCSLP----NLELLVVGNNMLSTFPPGVEKLQ 380

Query: 269 CLSELSLRDNPL 280
            L EL +  N L
Sbjct: 381 KLRELRIYGNQL 392



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 112/244 (45%), Gaps = 53/244 (21%)

Query: 84  LDLSNNRITHLPQAI----------------TNFP--------LSTLIARNNLLTAESLP 119
           LDLSN  +T +P+ +                T+ P        L  L A  N+LT  SLP
Sbjct: 17  LDLSNQGLTSIPEEVFDITDLEALDVSNNKLTSIPEAIGRLQKLYRLDANGNMLT--SLP 74

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREI----------- 168
           + +S+L+ LK   +  N L + P  + D+  L++L++ +N L  +P +I           
Sbjct: 75  QAISSLQGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKKLPTKIFSCLNLVNFDA 134

Query: 169 ------------NKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
                        KL K+  L + GN LT++P     L  LE L + +N+L + P  +  
Sbjct: 135 SNNNLSTFPPGVEKLQKVRELRIYGNQLTEVPSGVCSLPNLELLSVGNNKLSTFPPGVEK 194

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           L+ L+ L ++ N+L  +P  + +L      L+SL  + NK  T P  +  L+ L+ L + 
Sbjct: 195 LQKLRILYIYGNQLTEVPRGVCSLS----NLESLEANGNKFSTFPLGVEKLQKLTRLLIH 250

Query: 277 DNPL 280
           DN L
Sbjct: 251 DNQL 254



 Score = 71.2 bits (173), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 46/118 (38%), Positives = 66/118 (55%), Gaps = 6/118 (5%)

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
           YL L N  L  +P E+  +  L  L +  N LT IP+  G L +L  L  + N L SLP 
Sbjct: 16  YLDLSNQGLTSIPEEVFDITDLEALDVSNNKLTSIPEAIGRLQKLYRLDANGNMLTSLPQ 75

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
           +IS+L+ LK L +H+N L  LP  +  L    + L+ L + +NKL+ LPT+I +  CL
Sbjct: 76  AISSLQGLKQLYVHSNNLSELPDGLEDL----QNLEWLWVKDNKLKKLPTKIFS--CL 127


>gi|62646782|ref|XP_216085.3| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Rattus norvegicus]
 gi|109473061|ref|XP_001068373.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Rattus norvegicus]
          Length = 855

 Score =  110 bits (275), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/228 (33%), Positives = 124/228 (54%), Gaps = 16/228 (7%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L  N ++ F ++    TNL  LDL+ N+I  +P  I+    L  LI  +N    E  P
Sbjct: 511 LELNKNKITIFSEHLCSLTNLEYLDLAKNQIRKIPHCISAMLSLHVLILSDNKF--EIFP 568

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS- 178
           K++ +LKNL++ ++S NQL + P +I  +  ++ L L NN+  H P E   LC+L  L  
Sbjct: 569 KELCSLKNLQLLDISENQLHKIPSEISKLKKIQKLNLSNNNFTHFPAE---LCQLQTLED 625

Query: 179 -----LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
                + G  LT +P+    + QL+AL +S+N ++ +P +I  L+ L +    NN++ +L
Sbjct: 626 LNISQISGKKLTRLPEEVSRMTQLKALNISNNAIKEIPRNIGELRNLITFHASNNQINSL 685

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P+  ++L  L    +SL L  N L  LP+ I  L  L E++  DNPL+
Sbjct: 686 PSSFLSLNVL----QSLDLGGNNLTDLPSAIYKLSSLKEINFDDNPLL 729



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 78/223 (34%), Positives = 113/223 (50%), Gaps = 8/223 (3%)

Query: 60  TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN--FPLSTLIARNNLLTAES 117
           T+ L    L  FP +  K   ++ L L  N+I     A       L TL  + N L+  S
Sbjct: 141 TVHLDAKGLQEFPVDIVKVKYVKYLYLDKNQIKTFQGADPGDLLGLETLSLQENGLS--S 198

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           +P+++    NLKV N S N++   P ++L +  ++ L+L +N +  +P  +  L  L  L
Sbjct: 199 IPQEIQLFHNLKVLNASYNEISHIPKELLQLGNMRQLFLNSNHIESLPSGLENLRYLETL 258

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
           SLG N LT IPD+   L  L+ L L  NQL     S+  L  L SL L  N + +LP E+
Sbjct: 259 SLGKNRLTHIPDSLCGLKNLKTLNLEYNQLTIFSKSLCFLPKLVSLNLTGNMIGSLPKEV 318

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             LK     L++LL+++NKL  L  EI  L  + EL L DN L
Sbjct: 319 RELK----NLENLLMNHNKLTFLAVEIFQLLKIKELHLADNKL 357



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 78/269 (28%), Positives = 113/269 (42%), Gaps = 46/269 (17%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLR-----------------------SLDLSNNRITH 93
           N+++L L  NNL   P    K  NLR                       SL+ S N+ITH
Sbjct: 392 NLESLTLSDNNLEELPKKIRKLKNLRQLHANRNKMIKMAEEISHLSKIHSLEFSGNQITH 451

Query: 94  LPQAITNFPLSTLIARN---------NLLTAESL-------------PKDMSNLKNLKVF 131
           +P  I N    T +  N          L   +SL             P D+S  K L   
Sbjct: 452 VPIEIKNCKEITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISEIPVDLSFSKQLLHL 511

Query: 132 NLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTF 191
            L+ N++  F   +  +  L+YL L  N +  +P  I+ +  LHVL L  N     P   
Sbjct: 512 ELNKNKITIFSEHLCSLTNLEYLDLAKNQIRKIPHCISAMLSLHVLILSDNKFEIFPKEL 571

Query: 192 GDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLL 251
             L  L+ L +S+NQL  +P+ IS LK ++ L L NN     P E+  L+ L E L    
Sbjct: 572 CSLKNLQLLDISENQLHKIPSEISKLKKIQKLNLSNNNFTHFPAELCQLQTL-EDLNISQ 630

Query: 252 LHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +   KL  LP E+  +  L  L++ +N +
Sbjct: 631 ISGKKLTRLPEEVSRMTQLKALNISNNAI 659



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 84/256 (32%), Positives = 127/256 (49%), Gaps = 19/256 (7%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L   +N +S  P    +  N+R L L++N I  LP  + N   L TL    N LT 
Sbjct: 208 NLKVLNASYNEISHIPKELLQLGNMRQLFLNSNHIESLPSGLENLRYLETLSLGKNRLT- 266

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P  +  LKNLK  NL  NQL  F   +  +P L  L L  N +  +P+E+ +L  L 
Sbjct: 267 -HIPDSLCGLKNLKTLNLEYNQLTIFSKSLCFLPKLVSLNLTGNMIGSLPKEVRELKNLE 325

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L +  N LT +      L +++ L L+DN+LE++   I N K L+ L L NN L++LP 
Sbjct: 326 NLLMNHNKLTFLAVEIFQLLKIKELHLADNKLEAISPKIENFKELRLLNLDNNLLQSLPK 385

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
           +I    C++  L+SL L +N L  LP +I  LK L +L    N ++             +
Sbjct: 386 KIS--HCVN--LESLTLSDNNLEELPKKIRKLKNLRQLHANRNKMI------------KM 429

Query: 296 LELASRTLKVHEIDYS 311
            E  S   K+H +++S
Sbjct: 430 AEEISHLSKIHSLEFS 445



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 131/262 (50%), Gaps = 17/262 (6%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           +  IE LP+   N +   ++TL L  N L+  PD+     NL++L+L  N++T   +++ 
Sbjct: 239 SNHIESLPSGLENLR--YLETLSLGKNRLTHIPDSLCGLKNLKTLNLEYNQLTIFSKSLC 296

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
             P L +L    N++   SLPK++  LKNL+   ++ N+L    ++I  +  +K L+L +
Sbjct: 297 FLPKLVSLNLTGNMIG--SLPKEVRELKNLENLLMNHNKLTFLAVEIFQLLKIKELHLAD 354

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +  +I    +L +L+L  N L  +P        LE+L LSDN LE LP  I  LK
Sbjct: 355 NKLEAISPKIENFKELRLLNLDNNLLQSLPKKISHCVNLESLTLSDNNLEELPKKIRKLK 414

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+ L  + NK+  +  EI  L     K+ SL    N++  +P EI   K ++ + L  N
Sbjct: 415 NLRQLHANRNKMIKMAEEISHLS----KIHSLEFSGNQITHVPIEIKNCKEITRVELNYN 470

Query: 279 PLVIRFVSDMTYKPPSLLELAS 300
                   ++ Y P  L  L S
Sbjct: 471 --------NIMYFPVGLCALQS 484



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 109/225 (48%), Gaps = 5/225 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           +N++ LL+ HN L+F      +   ++ L L++N++  +   I NF     +   +    
Sbjct: 322 KNLENLLMNHNKLTFLAVEIFQLLKIKELHLADNKLEAISPKIENFK-ELRLLNLDNNLL 380

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           +SLPK +S+  NL+   LS N LE+ P +I  +  L+ L+   N +  +  EI+ L K+H
Sbjct: 381 QSLPKKISHCVNLESLTLSDNNLEELPKKIRKLKNLRQLHANRNKMIKMAEEISHLSKIH 440

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L   GN +T +P    +  ++  + L+ N +   P  +  L+ L  L  + N +  +P 
Sbjct: 441 SLEFSGNQITHVPIEIKNCKEITRVELNYNNIMYFPVGLCALQSLDYLSFNGNYISEIPV 500

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           ++      S++L  L L+ NK+      + +L  L  L L  N +
Sbjct: 501 DL----SFSKQLLHLELNKNKITIFSEHLCSLTNLEYLDLAKNQI 541



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 92/202 (45%), Gaps = 12/202 (5%)

Query: 46  LPNNDYNKKPENIDTLLLYH------NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L  N   K P  I  +L  H      N    FP       NL+ LD+S N++  +P  I+
Sbjct: 536 LAKNQIRKIPHCISAMLSLHVLILSDNKFEIFPKELCSLKNLQLLDISENQLHKIPSEIS 595

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLS---GNQLEQFPIQILDIPTLKYLY 155
               +  L   NN  T    P ++  L+ L+  N+S   G +L + P ++  +  LK L 
Sbjct: 596 KLKKIQKLNLSNNNFT--HFPAELCQLQTLEDLNISQISGKKLTRLPEEVSRMTQLKALN 653

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           + NN++  +PR I +L  L       N +  +P +F  L  L++L L  N L  LP++I 
Sbjct: 654 ISNNAIKEIPRNIGELRNLITFHASNNQINSLPSSFLSLNVLQSLDLGGNNLTDLPSAIY 713

Query: 216 NLKMLKSLLLHNNKLRTLPTEI 237
            L  LK +   +N L   P EI
Sbjct: 714 KLSSLKEINFDDNPLLRPPMEI 735



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/200 (29%), Positives = 94/200 (47%), Gaps = 16/200 (8%)

Query: 36  SETLATQIELLPNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNN 89
           S  L+  + +L +N +   P+      N+  L +  N L   P   SK   ++ L+LSNN
Sbjct: 549 SAMLSLHVLILSDNKFEIFPKELCSLKNLQLLDISENQLHKIPSEISKLKKIQKLNLSNN 608

Query: 90  RITHLP------QAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPI 143
             TH P      Q + +  +S +  +   LT   LP+++S +  LK  N+S N +++ P 
Sbjct: 609 NFTHFPAELCQLQTLEDLNISQISGKK--LT--RLPEEVSRMTQLKALNISNNAIKEIPR 664

Query: 144 QILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILS 203
            I ++  L   +  NN +N +P     L  L  L LGGN+LTD+P     L  L+ +   
Sbjct: 665 NIGELRNLITFHASNNQINSLPSSFLSLNVLQSLDLGGNNLTDLPSAIYKLSSLKEINFD 724

Query: 204 DNQLESLPASISNLKMLKSL 223
           DN L   P  I   K + ++
Sbjct: 725 DNPLLRPPMEICKGKQMHTI 744



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 3/112 (2%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           L+  P+  S+ T L++L++SNN I  +P+ I     L T  A NN +   SLP    +L 
Sbjct: 636 LTRLPEEVSRMTQLKALNISNNAIKEIPRNIGELRNLITFHASNNQIN--SLPSSFLSLN 693

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
            L+  +L GN L   P  I  + +LK +   +N L   P EI K  ++H ++
Sbjct: 694 VLQSLDLGGNNLTDLPSAIYKLSSLKEINFDDNPLLRPPMEICKGKQMHTIT 745


>gi|417783638|ref|ZP_12431356.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409953262|gb|EKO07763.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 289

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/224 (34%), Positives = 119/224 (53%), Gaps = 28/224 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           ++  L+L    L+  P    +  NL+ LDL  N+                         +
Sbjct: 75  DVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQF------------------------K 110

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++PK++  LKNL++ +L  NQ +  P +I  +  L+ L L +N L  +P+EI KL  L V
Sbjct: 111 TVPKEIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQV 170

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+L  N L  +P   G    L+ L L  N+L++LP  I  LK L++L L+ N+L TLP E
Sbjct: 171 LNLSSNQLITLPKEIGKPENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPRE 230

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L+ L+E    L L +N++ TLP EII L+ L +L+L +NP+
Sbjct: 231 IGRLQSLTE----LHLQHNQIATLPDEIIQLQNLRKLTLYENPI 270



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 4/108 (3%)

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           + +L L    LT +P     L  L+ L L  NQ +++P  I  LK L+ L L  N+ +T+
Sbjct: 76  VRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQFKTV 135

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P +I  LK     L+ L L +N+L TLP EI  L+ L  L+L  N L+
Sbjct: 136 PKKIGQLK----NLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLI 179


>gi|421131325|ref|ZP_15591507.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410357108|gb|EKP04375.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 300

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/229 (36%), Positives = 121/229 (52%), Gaps = 7/229 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N L+  P    +   LR L+L++N++T LP+ +     L  L   +N  T
Sbjct: 55  QNLEKLNLVGNQLTTLPKEIGRLQKLRVLNLAHNQLTSLPKEMELLQNLEILNLDDNEFT 114

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             S PK+   L+ L++ NL+GNQL   P ++  +  L+ L L  N    +P+E+  L  L
Sbjct: 115 --SFPKETRQLQKLRILNLAGNQLTSLPKEMELLQNLERLDLAGNRFKILPKEMELLQNL 172

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+LG N  T  P        L+ L LS NQL++L   I  L+ L+SL L  N+L ++P
Sbjct: 173 EALNLGHNQFTSFPKEIRRQQNLKWLYLSRNQLKTLSKEIVELQNLQSLHLDGNQLSSIP 232

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
            EI  L+ L E    L L NNKL+TLP EI  L+ L  L L  NP   +
Sbjct: 233 KEIGQLQNLFE----LNLQNNKLKTLPKEIGLLQNLQVLRLYSNPFSFK 277



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/214 (38%), Positives = 112/214 (52%), Gaps = 7/214 (3%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLK 126
           L   P     F NL  L+L  N++T LP+ I     L  L   +N LT  SLPK+M  L+
Sbjct: 44  LDSLPRVIGLFQNLEKLNLVGNQLTTLPKEIGRLQKLRVLNLAHNQLT--SLPKEMELLQ 101

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL++ NL  N+   FP +   +  L+ L L  N L  +P+E+  L  L  L L GN    
Sbjct: 102 NLEILNLDDNEFTSFPKETRQLQKLRILNLAGNQLTSLPKEMELLQNLERLDLAGNRFKI 161

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P     L  LEAL L  NQ  S P  I   + LK L L  N+L+TL  EI+ L    + 
Sbjct: 162 LPKEMELLQNLEALNLGHNQFTSFPKEIRRQQNLKWLYLSRNQLKTLSKEIVEL----QN 217

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L+SL L  N+L ++P EI  L+ L EL+L++N L
Sbjct: 218 LQSLHLDGNQLSSIPKEIGQLQNLFELNLQNNKL 251



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 4/138 (2%)

Query: 145 ILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD 204
           IL++     + +G + L+ +PR I     L  L+L GN LT +P   G L +L  L L+ 
Sbjct: 28  ILEMSMSTGVSMGLHELDSLPRVIGLFQNLEKLNLVGNQLTTLPKEIGRLQKLRVLNLAH 87

Query: 205 NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           NQL SLP  +  L+ L+ L L +N+  + P E   L    +KL+ L L  N+L +LP E+
Sbjct: 88  NQLTSLPKEMELLQNLEILNLDDNEFTSFPKETRQL----QKLRILNLAGNQLTSLPKEM 143

Query: 265 ITLKCLSELSLRDNPLVI 282
             L+ L  L L  N   I
Sbjct: 144 ELLQNLERLDLAGNRFKI 161


>gi|418730457|ref|ZP_13288951.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|410774666|gb|EKR54670.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 265

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/224 (34%), Positives = 119/224 (53%), Gaps = 28/224 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           ++  L+L    L+  P    +  NL+ LDL  N+                         +
Sbjct: 51  DVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQF------------------------K 86

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++PK++  LKNL++ +L  NQ +  P +I  +  L+ L L +N L  +P+EI K   L V
Sbjct: 87  TVPKEIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKQENLQV 146

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+L  N L  +P   G L  L+ L L  N+L++LP  I  LK L++L L+ N+L TLP E
Sbjct: 147 LNLSSNQLITLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPRE 206

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L+ L+E    L L +N++ TLP EII L+ L +L+L +NP+
Sbjct: 207 IGRLQSLTE----LHLQHNQIATLPDEIIQLQNLRKLTLYENPI 246



 Score = 47.8 bits (112), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 39/108 (36%), Positives = 57/108 (52%), Gaps = 4/108 (3%)

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           + +L L    LT +P     L  L+ L L  NQ +++P  I  LK L+ L L  N+ +T+
Sbjct: 52  VRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQFKTV 111

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P +I  LK     L+ L L +N+L TLP EI   + L  L+L  N L+
Sbjct: 112 PKKIGQLK----NLQVLNLSSNQLTTLPKEIGKQENLQVLNLSSNQLI 155


>gi|444525409|gb|ELV14016.1| Protein flightless-1 like protein [Tupaia chinensis]
          Length = 1236

 Score =  110 bits (274), Expect = 1e-21,   Method: Composition-based stats.
 Identities = 93/315 (29%), Positives = 148/315 (46%), Gaps = 32/315 (10%)

Query: 17  DSFKTVSIKTLDFSYSSL-----DSETLATQIEL-LPNNDYNKKPE----NIDTLL---L 63
           D FK   +  LD SY+ L     + E     + L L +N  +  P     N+  LL   L
Sbjct: 65  DIFKLDDLSVLDLSYNQLTECPRELENAKNMLVLNLSHNSIDNIPNQLFINLTDLLYLDL 124

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITH--LPQAITNFPLSTLIARNNLLTAESLPKD 121
             N L   P    +  +L++L L+ N + H  L Q      L TL  RN   T  +LP  
Sbjct: 125 SENRLESLPPQMRRLVHLQTLVLNGNPLLHAQLRQLPAMTALQTLHLRNTQRTQSNLPTS 184

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L NL   +LS N L + P  +  +P+L+ L L +N ++ +   I++   +  L+L  
Sbjct: 185 LEGLSNLADVDLSWNDLTRVPECLYTLPSLRRLNLSSNQISELSLCIDQWVHVETLNLSR 244

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQL--ESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
           N LT +P     L +L+ L L+ N+L  + LP+ I  L  L+  +  NN L  +P  +  
Sbjct: 245 NQLTSLPSAICKLTKLKRLYLNSNKLDFDGLPSGIGKLTSLEEFMAANNNLELIPESL-- 302

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELA 299
             C   KL+ L+L+ N+L TLP  +  L  +  L +R+NP ++     M  KP      A
Sbjct: 303 --CRCPKLRKLVLNQNRLVTLPEAVHFLTEIEVLDVRENPSLV-----MPPKP------A 349

Query: 300 SRTLKVHEIDYSQEH 314
            R  + + ID+S ++
Sbjct: 350 DRAAEWYNIDFSLQN 364



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 67/220 (30%), Positives = 109/220 (49%), Gaps = 13/220 (5%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           L + P+  +    L  L +S+N +T L   +++ P L  ++AR N L    +P D+  L 
Sbjct: 11  LCYLPEELAALQKLEHLSVSHNHLTTLHGELSSLPSLRAIVARANSLKNSGVPDDIFKLD 70

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREIN-KLCKLHVLSLGGNSLT 185
           +L V +LS NQL + P ++ +   +  L L +NS++++P ++   L  L  L L  N L 
Sbjct: 71  DLSVLDLSYNQLTECPRELENAKNMLVLNLSHNSIDNIPNQLFINLTDLLYLDLSENRLE 130

Query: 186 DIPDTFGDLYQLEALILSDN-----QLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
            +P     L  L+ L+L+ N     QL  LPA    +  L++L L N + RT      +L
Sbjct: 131 SLPPQMRRLVHLQTLVLNGNPLLHAQLRQLPA----MTALQTLHLRNTQ-RTQSNLPTSL 185

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           + LS  L  + L  N L  +P  + TL  L  L+L  N +
Sbjct: 186 EGLS-NLADVDLSWNDLTRVPECLYTLPSLRRLNLSSNQI 224


>gi|418755269|ref|ZP_13311476.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
 gi|409964280|gb|EKO32170.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
          Length = 199

 Score =  110 bits (274), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 73/169 (43%), Positives = 100/169 (59%), Gaps = 3/169 (1%)

Query: 78  FTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGN 136
             NL+ L L+ N++T LP+ I     L  L+   N LT  +LP ++ NL+NL+  NL  N
Sbjct: 5   LQNLQELYLNENQLTALPKEIGKLQNLQKLVLNRNQLT--TLPIEIGNLQNLQGLNLDKN 62

Query: 137 QLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQ 196
           QL   P +I  +  L+ L+LGNN L  +P EI  L KL  L L  N LT IP   G+L  
Sbjct: 63  QLTTLPKEIRKLQNLQGLHLGNNKLTALPIEIENLQKLQWLGLNKNQLTTIPKEIGNLQN 122

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           L+ L LS NQL ++P  I NL+ L++L L+NN+L TLP EI  L+ L +
Sbjct: 123 LKELNLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPKEIGKLQNLQD 171



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/174 (38%), Positives = 95/174 (54%), Gaps = 3/174 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    K  NL+ L L+ N++T LP  I N   L  L    N LT
Sbjct: 6   QNLQELYLNENQLTALPKEIGKLQNLQKLVLNRNQLTTLPIEIGNLQNLQGLNLDKNQLT 65

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL+  +L  N+L   PI+I ++  L++L L  N L  +P+EI  L  L
Sbjct: 66  --TLPKEIRKLQNLQGLHLGNNKLTALPIEIENLQKLQWLGLNKNQLTTIPKEIGNLQNL 123

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
             L+L  N LT IP    +L +LE L L +NQL +LP  I  L+ L+ L L  N
Sbjct: 124 KELNLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPKEIGKLQNLQDLYLGGN 177



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/181 (37%), Positives = 96/181 (53%), Gaps = 19/181 (10%)

Query: 121 DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
           ++ NL+NL+   L+ NQL   P +I  +  L+ L L  N L  +P EI  L  L  L+L 
Sbjct: 1   EIGNLQNLQELYLNENQLTALPKEIGKLQNLQKLVLNRNQLTTLPIEIGNLQNLQGLNLD 60

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
            N LT +P     L  L+ L L +N+L +LP  I NL+ L+ L L+ N+L T+P EI  L
Sbjct: 61  KNQLTTLPKEIRKLQNLQGLHLGNNKLTALPIEIENLQKLQWLGLNKNQLTTIPKEIGNL 120

Query: 241 KCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           + L E                   KL++L L+NN+L TLP EI  L+ L +L L  NP +
Sbjct: 121 QNLKELNLSSNQLTTIPKEIENLQKLETLDLYNNQLTTLPKEIGKLQNLQDLYLGGNPSL 180

Query: 282 I 282
           I
Sbjct: 181 I 181


>gi|429961970|gb|ELA41514.1| hypothetical protein VICG_01498 [Vittaforma corneae ATCC 50505]
          Length = 1394

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 125/239 (52%), Gaps = 13/239 (5%)

Query: 43  IELLPNNDYNKKP------ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQ 96
           I  + NN  N+ P      E++  L+   N +   PD+  K  NL  L L++N+IT LP 
Sbjct: 764 ILWMQNNKINRLPGSFGELESLMELVADCNKIPLLPDSFGKLKNLSVLRLNSNQITSLPD 823

Query: 97  AITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLY 155
                  LS  +   N+LT   LP+   NLK+L+V  L  N+LE  P   +D+ +L++L+
Sbjct: 824 NFGKLTNLSECMINFNMLT--RLPESFGNLKSLRVLWLKANRLESLPDNFIDLASLEHLF 881

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           L  N L  +P +I  L  L   SL  NSL  IPD+   LY+LE L +++N ++ LP  + 
Sbjct: 882 LDFNRLKKIPEKIGLLKNLTKFSLAQNSLKIIPDSVTKLYELEELNMANNAIKRLPYCMG 941

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           NL+ L  L L++NKL  LP  +  L    E+L  L +H N+ R L   +  +  L E+ 
Sbjct: 942 NLRKLMELNLNSNKLDNLPDSMKNL----ERLSILKIHTNQFRRLSDCVYEMTNLKEIG 996



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/240 (32%), Positives = 119/240 (49%), Gaps = 10/240 (4%)

Query: 78  FTNLRSLDLSNNR-ITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSG 135
             NL  L LS N+ +  LP+   N   L  L+ +N+ +TA  LP+++ NLK+L +  +  
Sbjct: 712 LVNLEFLRLSGNKNLETLPENFDNLINLKQLVIQNSKITA--LPENIGNLKSLAILWMQN 769

Query: 136 NQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLY 195
           N++ + P    ++ +L  L    N +  +P    KL  L VL L  N +T +PD FG L 
Sbjct: 770 NKINRLPGSFGELESLMELVADCNKIPLLPDSFGKLKNLSVLRLNSNQITSLPDNFGKLT 829

Query: 196 QLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNN 255
            L   +++ N L  LP S  NLK L+ L L  N+L +LP   I L      L+ L L  N
Sbjct: 830 NLSECMINFNMLTRLPESFGNLKSLRVLWLKANRLESLPDNFIDL----ASLEHLFLDFN 885

Query: 256 KLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHL 315
           +L+ +P +I  LK L++ SL  N L  + + D   K   L EL      +  + Y   +L
Sbjct: 886 RLKKIPEKIGLLKNLTKFSLAQNSL--KIIPDSVTKLYELEELNMANNAIKRLPYCMGNL 943



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 106/223 (47%), Gaps = 32/223 (14%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ- 137
           NL  LDLSNN+IT +P+ IT    L  L  R+N +    L      +K LKV  LS NQ 
Sbjct: 278 NLTVLDLSNNKITQIPKYITELVNLKVLNLRSNKIAL--LRGSFKKMKGLKVLKLSLNQQ 335

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           L  FP QIL++ +LK L      +  +PREI++L  L VL L GN +  +P +   L +L
Sbjct: 336 LGHFPSQILNLKSLKILLASFCKIESIPREISELTNLEVLILNGNKIPALPKSIKHLAKL 395

Query: 198 EALILS------------------------DNQLESLPASISNLKMLKSLLLHNNKLRTL 233
             L L                          N+++ LP +I+ L+ L+ L L   ++  L
Sbjct: 396 RILGLGRFGPENISDCEEYSRNESKKISDDRNRIKRLPDTITELQNLEILNLDGVEIEIL 455

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           P  I  L    +K+K L+L+    + LP  I  +  L  LS +
Sbjct: 456 PENIGRL----QKMKKLILNCGNFKQLPESICQIASLRILSCK 494



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 137/294 (46%), Gaps = 34/294 (11%)

Query: 24   IKTLDFSYSSLDS--ETLA--TQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFT 79
            I  L  S+  L+S  E +A   +I LLP  D   K +N+  L L  N ++  PDN  K T
Sbjct: 772  INRLPGSFGELESLMELVADCNKIPLLP--DSFGKLKNLSVLRLNSNQITSLPDNFGKLT 829

Query: 80   NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA---------------------ES 117
            NL    ++ N +T LP++  N   L  L  + N L +                     + 
Sbjct: 830  NLSECMINFNMLTRLPESFGNLKSLRVLWLKANRLESLPDNFIDLASLEHLFLDFNRLKK 889

Query: 118  LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
            +P+ +  LKNL  F+L+ N L+  P  +  +  L+ L + NN++  +P  +  L KL  L
Sbjct: 890  IPEKIGLLKNLTKFSLAQNSLKIIPDSVTKLYELEELNMANNAIKRLPYCMGNLRKLMEL 949

Query: 178  SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            +L  N L ++PD+  +L +L  L +  NQ   L   +  +  LK +    N +  +  +I
Sbjct: 950  NLNSNKLDNLPDSMKNLERLSILKIHTNQFRRLSDCVYEMTNLKEIGASFNSISAIYRDI 1009

Query: 238  ITLKCLSEKLKSLLLHNNKLRTLPTEIITLK-CLSELSLRDNPLVIRFVSDMTY 290
              LK    KL+ L L+ N ++ LP  I  L   L  L LR N  +  F S++T+
Sbjct: 1010 SKLK----KLRRLNLYKNNIKKLPCTIAELNDTLVLLDLRRNQ-IEDFGSEVTF 1058



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 71/232 (30%), Positives = 118/232 (50%), Gaps = 32/232 (13%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLK 129
            P    KF NL  L LS+N++  LP++I     L  L  + N+L  E++P+   +++ L 
Sbjct: 35  LPIGILKFKNLIVLSLSSNQLNKLPKSIAELSHLKCLNLQCNML--EAVPEFPPSIRTL- 91

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
             NL+ N ++  P  I ++ +++ LYL NN ++ +P  I +L  L +LS+ GN L ++PD
Sbjct: 92  --NLNKNLIKAIPKSIFNLKSIEKLYLNNNLIDFLPDSIAELSTLKLLSMQGNQLIELPD 149

Query: 190 TFGDLYQLEALILSDNQLESLPA-------------SIS--------NLKMLKSLLLHNN 228
             G L  L  L ++ N+++ LP              SI+        +L  LK L L  N
Sbjct: 150 LSG-LPDLRHLDVAFNRIKELPRLSPKLATLTARFNSIAKIDSMCSPSLSYLKKLDLLGN 208

Query: 229 KLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +++T+P EI  L      ++ L L  N +  +P  I +LK L +L L  N +
Sbjct: 209 QIKTIPAEIGNL----NSVEMLYLQFNNIVEVPRSIFSLKNLKQLHLGSNKI 256



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 84/293 (28%), Positives = 132/293 (45%), Gaps = 63/293 (21%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQ------ 96
           I+ +P + +N K  +I+ L L +N + F PD+ ++ + L+ L +  N++  LP       
Sbjct: 98  IKAIPKSIFNLK--SIEKLYLNNNLIDFLPDSIAELSTLKLLSMQGNQLIELPDLSGLPD 155

Query: 97  ---------AITNFP-----LSTLIAR-NNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
                     I   P     L+TL AR N++   +S+     +L  LK  +L GNQ++  
Sbjct: 156 LRHLDVAFNRIKELPRLSPKLATLTARFNSIAKIDSMCS--PSLSYLKKLDLLGNQIKTI 213

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREI-------------NKLCK--------------- 173
           P +I ++ +++ LYL  N++  VPR I             NK+ K               
Sbjct: 214 PAEIGNLNSVEMLYLQFNNIVEVPRSIFSLKNLKQLHLGSNKISKLPARLTGKAKKSYLI 273

Query: 174 -----LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLH-N 227
                L VL L  N +T IP    +L  L+ L L  N++  L  S   +K LK L L  N
Sbjct: 274 HFQKNLTVLDLSNNKITQIPKYITELVNLKVLNLRSNKIALLRGSFKKMKGLKVLKLSLN 333

Query: 228 NKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L   P++I+ LK     LK LL    K+ ++P EI  L  L  L L  N +
Sbjct: 334 QQLGHFPSQILNLK----SLKILLASFCKIESIPREISELTNLEVLILNGNKI 382



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/233 (29%), Positives = 110/233 (47%), Gaps = 26/233 (11%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKN 127
           L+  P +    TNLR LDL++N ++ LP ++ N   S  I  NN++  +S       L +
Sbjct: 546 LTELPSSFENLTNLRVLDLASNELSVLPDSLGNVVYSRDIKNNNVIECKS------GLVS 599

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYL-GNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           L+  NL  N +      + ++ +L+ L L G  +L  +P     L  L  L +   ++  
Sbjct: 600 LRTLNLYHNPIVSIADNVGNLESLEALNLIGWGNLTSLPDTFVNLANLKKLDICDANIQQ 659

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL-------PTEII- 238
           +P+ FG L  LE L +   +LE  P S  N+  LK L + N K+ TL         E + 
Sbjct: 660 LPEDFGKLQSLEQLQIKSVKLEKFPESCKNMANLKRLEVRNTKVATLFGFENLVNLEFLR 719

Query: 239 -----TLKCLSE------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
                 L+ L E       LK L++ N+K+  LP  I  LK L+ L +++N +
Sbjct: 720 LSGNKNLETLPENFDNLINLKQLVIQNSKITALPENIGNLKSLAILWMQNNKI 772



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 109/255 (42%), Gaps = 52/255 (20%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLT 114
           P +I TL L  N +   P +     ++  L L+NN I  LP +I                
Sbjct: 85  PPSIRTLNLNKNLIKAIPKSIFNLKSIEKLYLNNNLIDFLPDSI---------------- 128

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPR-------- 166
                   + L  LK+ ++ GNQL + P  +  +P L++L +  N +  +PR        
Sbjct: 129 --------AELSTLKLLSMQGNQLIELP-DLSGLPDLRHLDVAFNRIKELPRLSPKLATL 179

Query: 167 --------EINKLCK-----LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
                   +I+ +C      L  L L GN +  IP   G+L  +E L L  N +  +P S
Sbjct: 180 TARFNSIAKIDSMCSPSLSYLKKLDLLGNQIKTIPAEIGNLNSVEMLYLQFNNIVEVPRS 239

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIIT------LKCLSEKLKSLLLHNNKLRTLPTEIITL 267
           I +LK LK L L +NK+  LP  +        L    + L  L L NNK+  +P  I  L
Sbjct: 240 IFSLKNLKQLHLGSNKISKLPARLTGKAKKSYLIHFQKNLTVLDLSNNKITQIPKYITEL 299

Query: 268 KCLSELSLRDNPLVI 282
             L  L+LR N + +
Sbjct: 300 VNLKVLNLRSNKIAL 314



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 107/241 (44%), Gaps = 24/241 (9%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           +N++ L L    +   P+N  +   ++ L L+      LP++I       +++  +    
Sbjct: 440 QNLEILNLDGVEIEILPENIGRLQKMKKLILNCGNFKQLPESICQIASLRILSCKSCRNL 499

Query: 116 ESLPKDMSNLKNLKVFNLSG-NQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            SLP  +S LKNLKV  L+    L      + DI +L+ L + N  L  +P     L  L
Sbjct: 500 SSLPSGLSILKNLKVLVLNKCYSLLGLGRNVGDIKSLRVLRVRNIRLTELPSSFENLTNL 559

Query: 175 HVLSLGGNSLTDIPDTFGD------------------LYQLEALILSDNQLESLPASISN 216
            VL L  N L+ +PD+ G+                  L  L  L L  N + S+  ++ N
Sbjct: 560 RVLDLASNELSVLPDSLGNVVYSRDIKNNNVIECKSGLVSLRTLNLYHNPIVSIADNVGN 619

Query: 217 LKMLKSL-LLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
           L+ L++L L+    L +LP   + L      LK L + +  ++ LP +   L+ L +L +
Sbjct: 620 LESLEALNLIGWGNLTSLPDTFVNL----ANLKKLDICDANIQQLPEDFGKLQSLEQLQI 675

Query: 276 R 276
           +
Sbjct: 676 K 676



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 45/122 (36%), Positives = 64/122 (52%), Gaps = 3/122 (2%)

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L+  SLP  +   KNL V +LS NQL + P  I ++  LK L L  N L  VP       
Sbjct: 30  LSLHSLPIGILKFKNLIVLSLSSNQLNKLPKSIAELSHLKCLNLQCNMLEAVPEFPP--- 86

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            +  L+L  N +  IP +  +L  +E L L++N ++ LP SI+ L  LK L +  N+L  
Sbjct: 87  SIRTLNLNKNLIKAIPKSIFNLKSIEKLYLNNNLIDFLPDSIAELSTLKLLSMQGNQLIE 146

Query: 233 LP 234
           LP
Sbjct: 147 LP 148



 Score = 42.7 bits (99), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 44/136 (32%), Positives = 66/136 (48%), Gaps = 17/136 (12%)

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           +S+ G SL  +P        L  L LS NQL  LP SI+ L  LK L L  N L  +P  
Sbjct: 25  ISVCGLSLHSLPIGILKFKNLIVLSLSSNQLNKLPKSIAELSHLKCLNLQCNMLEAVPE- 83

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
                     +++L L+ N ++ +P  I  LK + +L L +N  +I F+      P S+ 
Sbjct: 84  ------FPPSIRTLNLNKNLIKAIPKSIFNLKSIEKLYLNNN--LIDFL------PDSIA 129

Query: 297 ELASRTLKVHEIDYSQ 312
           EL+  TLK+  +  +Q
Sbjct: 130 ELS--TLKLLSMQGNQ 143


>gi|443477390|ref|ZP_21067241.1| small GTP-binding protein [Pseudanabaena biceps PCC 7429]
 gi|443017486|gb|ELS31914.1| small GTP-binding protein [Pseudanabaena biceps PCC 7429]
          Length = 945

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/244 (35%), Positives = 133/244 (54%), Gaps = 10/244 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L +  N ++  PD+     NL  LDLS+N+IT +P  I N   L+ L    N +T 
Sbjct: 22  NLKELHIPFNQITQIPDSICNLANLTLLDLSSNQITQIPDVICNLVNLTQLYFGCNQIT- 80

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P  ++NL NL + +LS N +     ++  +  L+ L L  N ++ +P EI++L  L 
Sbjct: 81  -QIPDAIANLANLTLLHLSNNHISNITDKLFKLSKLQKLNLSLNKISTIPEEISQLYNLE 139

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDN-QLESLPASISNLKMLKSLLLHNNKLRTLP 234
            + L  N +  IPDT GDLY L+ L L+ N Q+ ++P +IS L  L ++ L  N++ T+P
Sbjct: 140 EIHLNSNRINIIPDTIGDLYNLQVLNLAYNKQICTIPDTISKLFNLVTIYLEGNQIATIP 199

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPS 294
             I  L     KL++L+L+ N++  +P EI  L  L ELSL  N   IR + D   K  +
Sbjct: 200 HGISQLS----KLQTLMLNENQISIIPNEISNLSNLQELSLYKNQ--IRLIPDSITKLSN 253

Query: 295 LLEL 298
           L EL
Sbjct: 254 LNEL 257



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 77/228 (33%), Positives = 121/228 (53%), Gaps = 8/228 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN-NLLTA 115
           N+  L    N ++  PD  +   NL  L LSNN I+++   +  F LS L   N +L   
Sbjct: 68  NLTQLYFGCNQITQIPDAIANLANLTLLHLSNNHISNITDKL--FKLSKLQKLNLSLNKI 125

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG-NNSLNHVPREINKLCKL 174
            ++P+++S L NL+  +L+ N++   P  I D+  L+ L L  N  +  +P  I+KL  L
Sbjct: 126 STIPEEISQLYNLEEIHLNSNRINIIPDTIGDLYNLQVLNLAYNKQICTIPDTISKLFNL 185

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             + L GN +  IP     L +L+ L+L++NQ+  +P  ISNL  L+ L L+ N++R +P
Sbjct: 186 VTIYLEGNQIATIPHGISQLSKLQTLMLNENQISIIPNEISNLSNLQELSLYKNQIRLIP 245

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
             I  L  L+E    L L  N++  +P  +  +  L  L LRDNPL I
Sbjct: 246 DSITKLSNLNE----LYLSRNQISMIPDSLSDMTKLKALGLRDNPLPI 289



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 62/175 (35%), Positives = 94/175 (53%), Gaps = 5/175 (2%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTL-IARNNLLTAESLPKDMS 123
           N +S  P+  S+  NL  + L++NRI  +P  I + + L  L +A N  +   ++P  +S
Sbjct: 123 NKISTIPEEISQLYNLEEIHLNSNRINIIPDTIGDLYNLQVLNLAYNKQIC--TIPDTIS 180

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            L NL    L GNQ+   P  I  +  L+ L L  N ++ +P EI+ L  L  LSL  N 
Sbjct: 181 KLFNLVTIYLEGNQIATIPHGISQLSKLQTLMLNENQISIIPNEISNLSNLQELSLYKNQ 240

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           +  IPD+   L  L  L LS NQ+  +P S+S++  LK+L L +N L  +P EI+
Sbjct: 241 IRLIPDSITKLSNLNELYLSRNQISMIPDSLSDMTKLKALGLRDNPL-PIPEEIL 294


>gi|417767302|ref|ZP_12415246.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400350239|gb|EJP02507.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 244

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/227 (37%), Positives = 116/227 (51%), Gaps = 7/227 (3%)

Query: 91  ITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIP 149
           +  LP+ I  F  L  L    N LT  SLPK++  L+ L+V NL+GNQ    P +I  + 
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLT--SLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQ 63

Query: 150 TLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            L+ L L  N    +P+EI +L  L  L L GN  T +P   G L +LEAL L  N+   
Sbjct: 64  NLERLDLAGNQFTFLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTI 123

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
            P  I   + LK L L  ++L+ LP EI+ L    + L+SL L  N+L +LP EI  L+ 
Sbjct: 124 FPKEIRQQQSLKWLRLSGDQLKILPKEILLL----QNLQSLHLDGNQLTSLPKEIGQLQN 179

Query: 270 LSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLP 316
           L EL+L+DN L          +   +L L S +  + E    QE LP
Sbjct: 180 LFELNLQDNKLKTLPKEIEQLQNLQVLRLYSNSFSLKEKQKIQELLP 226



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 86/167 (51%), Gaps = 3/167 (1%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L  N  +  P    +  NL  LDL+ N+ T LP+ I     L  L    N  T  SLPK+
Sbjct: 47  LAGNQFTSLPKEIGQLQNLERLDLAGNQFTFLPKEIGQLQNLERLDLAGNQFT--SLPKE 104

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L+ L+  NL  N+   FP +I    +LK+L L  + L  +P+EI  L  L  L L G
Sbjct: 105 IGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKILPKEILLLQNLQSLHLDG 164

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
           N LT +P   G L  L  L L DN+L++LP  I  L+ L+ L L++N
Sbjct: 165 NQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIEQLQNLQVLRLYSN 211



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 81/174 (46%), Gaps = 15/174 (8%)

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           +G + L  +PR I     L  L+L GN LT +P   G L +L  L L+ NQ  SLP  I 
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIG 60

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            L+ L+ L L  N+   LP EI  L    + L+ L L  N+  +LP EI  L+ L  L+L
Sbjct: 61  QLQNLERLDLAGNQFTFLPKEIGQL----QNLERLDLAGNQFTSLPKEIGQLQKLEALNL 116

Query: 276 RDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQN--LVQYLESAH 327
             N   I        +    L L+   LK+         LP+   L+Q L+S H
Sbjct: 117 DHNRFTIFPKEIRQQQSLKWLRLSGDQLKI---------LPKEILLLQNLQSLH 161


>gi|449268295|gb|EMC79165.1| Leucine-rich repeat-containing protein 40 [Columba livia]
          Length = 559

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 123/224 (54%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSF-FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           N+DT    + NLSF   D   + T+L  L L++N++  L + +     L+ L   +N LT
Sbjct: 16  NLDTPEEAYQNLSFGAADRWWEQTDLTKLILASNKLQSLSEDVKLLAALTVLDVHDNQLT 75

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLP  +  L+NL+  ++S N+L   P ++  +P LK L L +N L H+P    +L  L
Sbjct: 76  --SLPSALGQLENLQKLDVSHNKLRSIPEELTQLPHLKSLLLHHNELTHLPAGFGQLVNL 133

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LTDIP +F  L  L  L L+ N+LESLPA IS +K L+ L    N L T+P
Sbjct: 134 EELDLSNNHLTDIPTSFALLINLVRLNLAGNKLESLPADISAMKSLRQLDCSKNYLETVP 193

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           ++I T+  L +    L L  NKLR+LP E  + K L EL   +N
Sbjct: 194 SKIATMASLEQ----LYLRKNKLRSLP-EFSSCKLLKELHAGEN 232



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 83/229 (36%), Positives = 117/229 (51%), Gaps = 13/229 (5%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           EN+  L + HN L   P+  ++  +L+SL L +N +THLP        L  L   NN LT
Sbjct: 85  ENLQKLDVSHNKLRSIPEELTQLPHLKSLLLHHNELTHLPAGFGQLVNLEELDLSNNHLT 144

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P   + L NL   NL+GN+LE  P  I  + +L+ L    N L  VP +I  +  L
Sbjct: 145 --DIPTSFALLINLVRLNLAGNKLESLPADISAMKSLRQLDCSKNYLETVPSKIATMASL 202

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKS---LLLHNNKLR 231
             L L  N L  +P+ F     L+ L   +NQ+E+L A   NLK L S   L L +NK++
Sbjct: 203 EQLYLRKNKLRSLPE-FSSCKLLKELHAGENQIETLNA--ENLKQLNSLSVLELRDNKIK 259

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           ++P EI  L    +KL+ L L NN +  LP  +  L  L  L+L  NPL
Sbjct: 260 SVPDEITLL----QKLERLDLANNDISRLPYTLGNLSQLKFLALEGNPL 304



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 55/192 (28%), Positives = 96/192 (50%), Gaps = 12/192 (6%)

Query: 74  NASKFTNLRSLDLSNNRITHLPQ----AITNFPLSTLIARNNLLTAESLPKDMSNLKN-L 128
           N    T+L+ L+ S  +   +P     A+ + P++T     N L+   +P  +  LK+ +
Sbjct: 351 NMHAITSLKLLEYSEKQAAVIPDEMFDAVRSHPVATANFSKNQLS--EVPPRIVELKDSV 408

Query: 129 KVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
              NL  N++    +++  +  L +L + NN L  +P E+  L +L +++L  N     P
Sbjct: 409 CDVNLGFNRISSISLELCVLHKLTHLDIRNNFLTSLPEEMEALARLQIINLSFNRFKVFP 468

Query: 189 DTFGDLYQLEALILSDNQLESL-PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
                +  LE ++LS+NQ+ S+ P  + N+  L +L L NN L  +P E+    C  E L
Sbjct: 469 SVLYRMGALETILLSNNQVGSIDPLQLKNMDKLGTLDLQNNDLLQVPPELGN--C--ETL 524

Query: 248 KSLLLHNNKLRT 259
           ++LLL  N  RT
Sbjct: 525 RTLLLEGNPFRT 536



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 87/344 (25%), Positives = 147/344 (42%), Gaps = 87/344 (25%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           QIE L N +  K+  ++  L L  N +   PD  +    L  LDL+NN I+ LP  + N 
Sbjct: 233 QIETL-NAENLKQLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANNDISRLPYTLGNL 291

Query: 102 -----------PLSTLIARNNLL---------------------------TAESLPKD-- 121
                      PL T+  R +LL                           TA +LP +  
Sbjct: 292 SQLKFLALEGNPLRTI--RRDLLQKGTQELLKYLRSKIQDEPSPTGEPPVTAMTLPSESR 349

Query: 122 --MSNLKNLKVF--------------------------NLSGNQLEQFPIQILDIP-TLK 152
             M  + +LK+                           N S NQL + P +I+++  ++ 
Sbjct: 350 VNMHAITSLKLLEYSEKQAAVIPDEMFDAVRSHPVATANFSKNQLSEVPPRIVELKDSVC 409

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            + LG N ++ +  E+  L KL  L +  N LT +P+    L +L+ + LS N+ +  P+
Sbjct: 410 DVNLGFNRISSISLELCVLHKLTHLDIRNNFLTSLPEEMEALARLQIINLSFNRFKVFPS 469

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSE 272
            +  +  L+++LL NN++ ++  + + LK + +KL +L L NN L  +P E+   + L  
Sbjct: 470 VLYRMGALETILLSNNQVGSI--DPLQLKNM-DKLGTLDLQNNDLLQVPPELGNCETLRT 526

Query: 273 LSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLP 316
           L L  NP          ++ P    LA  T  V  ++Y +  +P
Sbjct: 527 LLLEGNP----------FRTPRAAILAKGTAAV--LEYLRSRIP 558



 Score = 44.7 bits (104), Expect = 0.089,   Method: Compositional matrix adjust.
 Identities = 44/155 (28%), Positives = 65/155 (41%), Gaps = 26/155 (16%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L  N L   P + S   +LR LD S N +  +P  I     L  L  R N L  
Sbjct: 155 NLVRLNLAGNKLESLPADISAMKSLRQLDCSKNYLETVPSKIATMASLEQLYLRKNKL-- 212

Query: 116 ESLPK-----------------------DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
            SLP+                       ++  L +L V  L  N+++  P +I  +  L+
Sbjct: 213 RSLPEFSSCKLLKELHAGENQIETLNAENLKQLNSLSVLELRDNKIKSVPDEITLLQKLE 272

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
            L L NN ++ +P  +  L +L  L+L GN L  I
Sbjct: 273 RLDLANNDISRLPYTLGNLSQLKFLALEGNPLRTI 307


>gi|428164461|gb|EKX33486.1| hypothetical protein GUITHDRAFT_81410 [Guillardia theta CCMP2712]
          Length = 493

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/237 (36%), Positives = 121/237 (51%), Gaps = 9/237 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           + + TL++  N L   P        LR L L +NRI +LP +I +   L+TLI  +N L 
Sbjct: 203 QKLKTLVVDVNQLRTLPATIGALGQLRELQLGDNRIENLPASIGSLTSLNTLILTDNNL- 261

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P ++  L NL   +LSGN +   P++I  +  L+ L L  NSL  +P  I  L  L
Sbjct: 262 -PEIPAEIGYLTNLTFLSLSGNPITSLPLEIGGLSALRALNLAKNSLISLPVSIGDLALL 320

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N L  +P++ GDL  L  L L  N L SLP  +  +  L  LLL  N+L TLP
Sbjct: 321 QVLHLHENELEALPESIGDLSALTDLRLDHNNLTSLPPEVGVMSSLTELLLDGNQLNTLP 380

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL--VIRFVSDMT 289
             I  L     +L+ L L  N+L  LP E+  +  L EL + DN L  V   ++D+T
Sbjct: 381 LSIGRLT----ELQVLNLDGNRLSLLPPEVAGMTALRELWVHDNKLSVVPEGIADLT 433



 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 84/225 (37%), Positives = 119/225 (52%), Gaps = 13/225 (5%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTL----IARNNLL 113
           ++TL+L  NNL   P      TNL  L LS N IT LP  I    LS L    +A+N+L+
Sbjct: 251 LNTLILTDNNLPEIPAEIGYLTNLTFLSLSGNPITSLPLEIGG--LSALRALNLAKNSLI 308

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
              SLP  + +L  L+V +L  N+LE  P  I D+  L  L L +N+L  +P E+  +  
Sbjct: 309 ---SLPVSIGDLALLQVLHLHENELEALPESIGDLSALTDLRLDHNNLTSLPPEVGVMSS 365

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L GN L  +P + G L +L+ L L  N+L  LP  ++ +  L+ L +H+NKL  +
Sbjct: 366 LTELLLDGNQLNTLPLSIGRLTELQVLNLDGNRLSLLPPEVAGMTALRELWVHDNKLSVV 425

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P  I  L      L  L L NN+L  LP  +  L  L+EL ++DN
Sbjct: 426 PEGIADLT----NLNVLTLSNNELTVLPANMTRLVSLNELWIKDN 466



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 78/222 (35%), Positives = 123/222 (55%), Gaps = 7/222 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAE 116
           + TL + HN +S  P +  +  N++SL L  N++  LP    +   L TL   +NLL  +
Sbjct: 21  LATLWVDHNQISELPPSIGQLNNVQSLALDFNQLNSLPNQFGDMTALVTLTISHNLL--K 78

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            LP  + NL NL++ +L+ N L   P  +  +  +  L    N L  VP  I +   L  
Sbjct: 79  YLPTSIGNLPNLRILDLNHNMLRSLPQTVGFLRLMSELKCNANQLTTVPTTIGECTALRQ 138

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N+++ +P   G L +++ L+L++N+L+S+PASI  + +L+ L L  N L+ LPTE
Sbjct: 139 LDLSFNAISALPLEIGRLTKMKQLLLNNNRLDSIPASIGTMTLLQELNLFENPLKGLPTE 198

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           +  +    +KLK+L++  N+LRTLP  I  L  L EL L DN
Sbjct: 199 LGNI----QKLKTLVVDVNQLRTLPATIGALGQLRELQLGDN 236



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 80/240 (33%), Positives = 130/240 (54%), Gaps = 12/240 (5%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ +L L  N L+  P+     T L +L +S+N + +LP +I N P L  L   +N+L  
Sbjct: 43  NVQSLALDFNQLNSLPNQFGDMTALVTLTISHNLLKYLPTSIGNLPNLRILDLNHNML-- 100

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLP+ +  L+ +     + NQL   P  I +   L+ L L  N+++ +P EI +L K+ 
Sbjct: 101 RSLPQTVGFLRLMSELKCNANQLTTVPTTIGECTALRQLDLSFNAISALPLEIGRLTKMK 160

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L  IP + G +  L+ L L +N L+ LP  + N++ LK+L++  N+LRTLP 
Sbjct: 161 QLLLNNNRLDSIPASIGTMTLLQELNLFENPLKGLPTELGNIQKLKTLVVDVNQLRTLPA 220

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN-----PLVIRFVSDMTY 290
            I  L     +L+ L L +N++  LP  I +L  L+ L L DN     P  I +++++T+
Sbjct: 221 TIGALG----QLRELQLGDNRIENLPASIGSLTSLNTLILTDNNLPEIPAEIGYLTNLTF 276



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/222 (34%), Positives = 119/222 (53%), Gaps = 7/222 (3%)

Query: 60  TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPL-STLIARNNLLTAESL 118
           TL + HN L + P +     NLR LDL++N +  LPQ +    L S L    N LT  ++
Sbjct: 69  TLTISHNLLKYLPTSIGNLPNLRILDLNHNMLRSLPQTVGFLRLMSELKCNANQLT--TV 126

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P  +     L+  +LS N +   P++I  +  +K L L NN L+ +P  I  +  L  L+
Sbjct: 127 PTTIGECTALRQLDLSFNAISALPLEIGRLTKMKQLLLNNNRLDSIPASIGTMTLLQELN 186

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           L  N L  +P   G++ +L+ L++  NQL +LPA+I  L  L+ L L +N++  LP  I 
Sbjct: 187 LFENPLKGLPTELGNIQKLKTLVVDVNQLRTLPATIGALGQLRELQLGDNRIENLPASIG 246

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +L  L+    +L+L +N L  +P EI  L  L+ LSL  NP+
Sbjct: 247 SLTSLN----TLILTDNNLPEIPAEIGYLTNLTFLSLSGNPI 284



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 95/299 (31%), Positives = 148/299 (49%), Gaps = 28/299 (9%)

Query: 23  SIKTLDFSYSSLDSETLA----TQIE--LLPNNDYNKKPENIDTLLL------YHNNLSF 70
           +++ LD S++++ +  L     T+++  LL NN  +  P +I T+ L      + N L  
Sbjct: 135 ALRQLDLSFNAISALPLEIGRLTKMKQLLLNNNRLDSIPASIGTMTLLQELNLFENPLKG 194

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLK 129
            P        L++L +  N++  LP  I     L  L   +N +  E+LP  + +L +L 
Sbjct: 195 LPTELGNIQKLKTLVVDVNQLRTLPATIGALGQLRELQLGDNRI--ENLPASIGSLTSLN 252

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
              L+ N L + P +I  +  L +L L  N +  +P EI  L  L  L+L  NSL  +P 
Sbjct: 253 TLILTDNNLPEIPAEIGYLTNLTFLSLSGNPITSLPLEIGGLSALRALNLAKNSLISLPV 312

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
           + GDL  L+ L L +N+LE+LP SI +L  L  L L +N L +LP E+  +  L+E    
Sbjct: 313 SIGDLALLQVLHLHENELEALPESIGDLSALTDLRLDHNNLTSLPPEVGVMSSLTE---- 368

Query: 250 LLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLEL-ASRTLKVHE 307
           LLL  N+L TLP  I  L  L  L+L  N         ++  PP +  + A R L VH+
Sbjct: 369 LLLDGNQLNTLPLSIGRLTELQVLNLDGN--------RLSLLPPEVAGMTALRELWVHD 419



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/192 (30%), Positives = 93/192 (48%), Gaps = 42/192 (21%)

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            +++ NQ+   P  I  + +L  L++ +N ++ +P  I +L  +  L+L  N L  +P+ 
Sbjct: 1   MSIADNQIVHLPASIGMLSSLATLWVDHNQISELPPSIGQLNNVQSLALDFNQLNSLPNQ 60

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE----- 245
           FGD+  L  L +S N L+ LP SI NL  L+ L L++N LR+LP  +  L+ +SE     
Sbjct: 61  FGDMTALVTLTISHNLLKYLPTSIGNLPNLRILDLNHNMLRSLPQTVGFLRLMSELKCNA 120

Query: 246 -------------------------------------KLKSLLLHNNKLRTLPTEIITLK 268
                                                K+K LLL+NN+L ++P  I T+ 
Sbjct: 121 NQLTTVPTTIGECTALRQLDLSFNAISALPLEIGRLTKMKQLLLNNNRLDSIPASIGTMT 180

Query: 269 CLSELSLRDNPL 280
            L EL+L +NPL
Sbjct: 181 LLQELNLFENPL 192



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/150 (33%), Positives = 76/150 (50%), Gaps = 3/150 (2%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L+ N L   P++    + L  L L +N +T LP  +     L+ L+   N L   +LP  
Sbjct: 325 LHENELEALPESIGDLSALTDLRLDHNNLTSLPPEVGVMSSLTELLLDGNQL--NTLPLS 382

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L  L+V NL GN+L   P ++  +  L+ L++ +N L+ VP  I  L  L+VL+L  
Sbjct: 383 IGRLTELQVLNLDGNRLSLLPPEVAGMTALRELWVHDNKLSVVPEGIADLTNLNVLTLSN 442

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           N LT +P     L  L  L + DN L+S P
Sbjct: 443 NELTVLPANMTRLVSLNELWIKDNNLKSHP 472


>gi|456864237|gb|EMF82646.1| leucine rich repeat protein [Leptospira weilii serovar Topaz str.
           LT2116]
          Length = 348

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 83/235 (35%), Positives = 116/235 (49%), Gaps = 45/235 (19%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLL 113
           +N+ TL LY N L   P+   K  NL+ L+LS N++T LP +I     L  L + RN L 
Sbjct: 86  QNLGTLDLYENELKALPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELLRNQLA 145

Query: 114 T--------------------AESLPKDMSNL-----------------------KNLKV 130
           T                     +SLPK++S L                       +NLK 
Sbjct: 146 TLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKS 205

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NL  N+LE FP  I+ + +L++L L  N    +P EI +L  L VL L GN LT +P+ 
Sbjct: 206 LNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPEG 265

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
            G L +LE+L L  N+L +LP  I +L+ LK L L  N+L  +P EI +L+ L E
Sbjct: 266 IGRLEKLESLFLEGNRLTTLPKGIGHLRGLKILRLEQNRLTAIPEEIGSLQNLKE 320



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 88/247 (35%), Positives = 124/247 (50%), Gaps = 22/247 (8%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N++TL+L  N L   P+   +  NL +LDL  N +  LP  I     L  L    N 
Sbjct: 61  KLRNLETLILAENILKTIPNEIEQLQNLGTLDLYENELKALPNEIGKLENLKELNLSGNQ 120

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT   LP  +  L+NL++  L  NQL   P +I+ + +L+ L L  N +  +P+EI++L 
Sbjct: 121 LTV--LPPSIGQLQNLEILELLRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQLS 178

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L LG N +  +   F  L  L++L L DN+LE+ PA I  LK L+ L L+ N+ + 
Sbjct: 179 NLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKI 238

Query: 233 LPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           LP EI+ L+ L                    EKL+SL L  N+L TLP  I  L+ L  L
Sbjct: 239 LPEEILQLENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIGHLRGLKIL 298

Query: 274 SLRDNPL 280
            L  N L
Sbjct: 299 RLEQNRL 305



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 106/300 (35%), Positives = 147/300 (49%), Gaps = 43/300 (14%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
           H+NL     N S+   +R LD+S+  +  LP+ I  F  L  LI   N LTA  +PK++ 
Sbjct: 6   HSNLEKSLQNPSE---VRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTA--IPKEIG 60

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            L+NL+   L+ N L+  P +I  +  L  L L  N L  +P EI KL  L  L+L GN 
Sbjct: 61  KLRNLETLILAENILKTIPNEIEQLQNLGTLDLYENELKALPNEIGKLENLKELNLSGNQ 120

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL--- 240
           LT +P + G L  LE L L  NQL +LP  I  LK L+ L L  N++++LP EI  L   
Sbjct: 121 LTVLPPSIGQLQNLEILELLRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNL 180

Query: 241 ----------KCLS------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRF 284
                     K LS      + LKSL L +NKL   P +I+ LK L  L+L  N    RF
Sbjct: 181 IWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYN----RF 236

Query: 285 VSDMTYKPPSLLELASRTLKVHEIDYSQ-EHLPQNLVQ-------YLESAHHCVNPKCKG 336
                  P  +L+L +  L+V E+  +Q   LP+ + +       +LE       PK  G
Sbjct: 237 ----KILPEEILQLEN--LQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIG 290



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 66/192 (34%), Positives = 96/192 (50%), Gaps = 5/192 (2%)

Query: 37  ETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQ 96
           E L  Q+  LP      K  ++  L L+ N +   P   S+ +NL  LDL  N+I  L  
Sbjct: 138 ELLRNQLATLPEEIVGLK--SLQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSL 195

Query: 97  AITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLY 155
                  L +L   +N L  E+ P D+  LK+L+  NL+ N+ +  P +IL +  L+ L 
Sbjct: 196 DFKRLQNLKSLNLLDNKL--ENFPADIVQLKSLEFLNLNYNRFKILPEEILQLENLQVLE 253

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           L  N L  +P  I +L KL  L L GN LT +P   G L  L+ L L  N+L ++P  I 
Sbjct: 254 LTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIGHLRGLKILRLEQNRLTAIPEEIG 313

Query: 216 NLKMLKSLLLHN 227
           +L+ LK L L +
Sbjct: 314 SLQNLKELYLQD 325


>gi|392396973|ref|YP_006433574.1| hypothetical protein Fleli_1349 [Flexibacter litoralis DSM 6794]
 gi|390528051|gb|AFM03781.1| leucine-rich repeat (LRR) protein [Flexibacter litoralis DSM 6794]
          Length = 682

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 99/301 (32%), Positives = 149/301 (49%), Gaps = 19/301 (6%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           QI  +PN   N K   +  L L  N +S  P   S+  NL  L LS+N+ T  P  ITN 
Sbjct: 320 QITTIPNEIGNLK--KLTRLYLEENKISELPSQISELQNLERLRLSDNKFTSFPMQITNL 377

Query: 102 P-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
             L  L    N +    LP  +SNLK L+   L+ N+ E+ P +IL++  LK L + +N 
Sbjct: 378 ENLKELKLSKNKINK--LPSQISNLKKLEDLYLNHNKFEELPTEILELNELKVLQINHNK 435

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P  I+ L KL  L LG N LT  P        L  L L  ++L++LP  I+ LK +
Sbjct: 436 LESLPNTISILDKLEELDLGYNRLTSFPLVILKFENLGRLSLEKSELKTLPKGITKLKKI 495

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           + L L +N+    P EI+      +K+  L L +NK+ ++P EI  LK +  LSL  N L
Sbjct: 496 RMLNLDSNRFEVFPIEILEF----QKISYLSLDDNKISSIPNEISKLKRMYVLSLSRNKL 551

Query: 281 VIRFVSDMT--YKPPSL--LELASRTLKVHEIDYSQEHLP-QNLVQYLESAHHCVNPKCK 335
                S+++  YK P L  + L    +   EI+  ++ LP  +L  + + A+     + +
Sbjct: 552 -----SELSFLYKFPRLSSVYLDYNRISFEEIEKVKKALPFSHLSFWKQKAYKVEKNEIE 606

Query: 336 G 336
           G
Sbjct: 607 G 607



 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/236 (36%), Positives = 120/236 (50%), Gaps = 27/236 (11%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-------------------PLSTLIA 108
           L+ FP      T LRSL++S N++  +PQ I                       +S L  
Sbjct: 205 LTEFPLEIVGLTKLRSLNVSQNQLKTIPQDIEKLTELEELDIGFNDYSNGSLDAISKLTK 264

Query: 109 RNNLLTAESLPKDMS----NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHV 164
            + L    S  KD+S    NLK L+  + S N+L +FP QI  + +LK L L +N +  +
Sbjct: 265 LSFLSVVSSELKDISFQLENLKKLEWLSFSYNELIEFPNQISKLDSLKELMLDDNQITTI 324

Query: 165 PREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLL 224
           P EI  L KL  L L  N ++++P    +L  LE L LSDN+  S P  I+NL+ LK L 
Sbjct: 325 PNEIGNLKKLTRLYLEENKISELPSQISELQNLERLRLSDNKFTSFPMQITNLENLKELK 384

Query: 225 LHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L  NK+  LP++I  LK    KL+ L L++NK   LPTEI+ L  L  L +  N L
Sbjct: 385 LSKNKINKLPSQISNLK----KLEDLYLNHNKFEELPTEILELNELKVLQINHNKL 436



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 79/228 (34%), Positives = 120/228 (52%), Gaps = 7/228 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +++  L+L  N ++  P+       L  L L  N+I+ LP  I+    L  L   +N 
Sbjct: 307 KLDSLKELMLDDNQITTIPNEIGNLKKLTRLYLEENKISELPSQISELQNLERLRLSDNK 366

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
            T  S P  ++NL+NLK   LS N++ + P QI ++  L+ LYL +N    +P EI +L 
Sbjct: 367 FT--SFPMQITNLENLKELKLSKNKINKLPSQISNLKKLEDLYLNHNKFEELPTEILELN 424

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           +L VL +  N L  +P+T   L +LE L L  N+L S P  I   + L  L L  ++L+T
Sbjct: 425 ELKVLQINHNKLESLPNTISILDKLEELDLGYNRLTSFPLVILKFENLGRLSLEKSELKT 484

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           LP  I  LK    K++ L L +N+    P EI+  + +S LSL DN +
Sbjct: 485 LPKGITKLK----KIRMLNLDSNRFEVFPIEILEFQKISYLSLDDNKI 528



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/290 (31%), Positives = 136/290 (46%), Gaps = 56/290 (19%)

Query: 41  TQIELLPNNDYNKKPENI------DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHL 94
           T++    NN   K P  I      DTL L  ++    P   +K TNL+ L L++N++ H 
Sbjct: 80  TKLYFFGNNLTGKIPSEIGNLIHLDTLYLAVSDFKTIPLEIAKLTNLKYLHLASNKLEHF 139

Query: 95  -PQAITNFPLSTLIARNN--------LLTAESLPK-------------DMSNLKNLKVFN 132
            PQ +T   L++L  RNN        +   +SL K              ++NL  L+  +
Sbjct: 140 PPQLLTLKNLTSLSLRNNKFDVFPVGVTNIKSLKKLDIDTNPIKKIHESIANLIELEELD 199

Query: 133 LSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN---------- 182
           +SG +L +FP++I+ +  L+ L +  N L  +P++I KL +L  L +G N          
Sbjct: 200 ISGMELTEFPLEIVGLTKLRSLNVSQNQLKTIPQDIEKLTELEELDIGFNDYSNGSLDAI 259

Query: 183 --------------SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
                          L DI     +L +LE L  S N+L   P  IS L  LK L+L +N
Sbjct: 260 SKLTKLSFLSVVSSELKDISFQLENLKKLEWLSFSYNELIEFPNQISKLDSLKELMLDDN 319

Query: 229 KLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           ++ T+P EI  LK    KL  L L  NK+  LP++I  L+ L  L L DN
Sbjct: 320 QITTIPNEIGNLK----KLTRLYLEENKISELPSQISELQNLERLRLSDN 365



 Score = 43.5 bits (101), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 35/99 (35%), Positives = 53/99 (53%), Gaps = 5/99 (5%)

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           +P+ I NL  L +L L  +  +T+P EI  L      LK L L +NKL   P +++TLK 
Sbjct: 93  IPSEIGNLIHLDTLYLAVSDFKTIPLEIAKLT----NLKYLHLASNKLEHFPPQLLTLKN 148

Query: 270 LSELSLRDNPLVIRFVSDMTYKPPSLLELASRTL-KVHE 307
           L+ LSLR+N   +  V     K    L++ +  + K+HE
Sbjct: 149 LTSLSLRNNKFDVFPVGVTNIKSLKKLDIDTNPIKKIHE 187


>gi|332711880|ref|ZP_08431810.1| Leucine Rich Repeat family protein [Moorea producens 3L]
 gi|332349208|gb|EGJ28818.1| Leucine Rich Repeat family protein [Moorea producens 3L]
          Length = 948

 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/226 (38%), Positives = 119/226 (52%), Gaps = 10/226 (4%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQA-ITNFP--LSTLIARNNL 112
           + I  L L  N +   P+  S  TNL  LDLS N+IT LPQ    NF   +   +++NNL
Sbjct: 47  KQIRVLNLSGNRIYQIPEYISNITNLVRLDLSRNQITKLPQKNFGNFINLIELDLSKNNL 106

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           +   +LP+ +  L NLK   LS NQL++ P+ + ++  L  L L  N LN  P  +  L 
Sbjct: 107 I---NLPESLGELPNLKKLYLSRNQLKKLPVSLGNLYNLTELDLSLNKLNTFPESLGNLS 163

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L GN+L  +PD  G+ Y+L  L L +NQL  LP S+ N+  L  L L NN+L  
Sbjct: 164 NLSRLDLVGNNLNKLPDFLGNFYKLTELYLWNNQLTHLPESLGNILNLSKLHLWNNQLTY 223

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           LP  I  L  L+    SL L  N+L  LP  I+ L  L+ L L  N
Sbjct: 224 LPKSIGNLSNLT----SLDLSYNQLSKLPENIVNLSNLTHLDLSGN 265



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 113/225 (50%), Gaps = 31/225 (13%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INKLCKLH 175
           ++P+++  LK ++V NLSGN++ Q P  I +I  L  L L  N +  +P++       L 
Sbjct: 38  NIPEEVFELKQIRVLNLSGNRIYQIPEYISNITNLVRLDLSRNQITKLPQKNFGNFINLI 97

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N+L ++P++ G+L  L+ L LS NQL+ LP S+ NL  L  L L  NKL T P 
Sbjct: 98  ELDLSKNNLINLPESLGELPNLKKLYLSRNQLKKLPVSLGNLYNLTELDLSLNKLNTFPE 157

Query: 236 EIITLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
            +  L  LS                    KL  L L NN+L  LP  +  +  LS+L L 
Sbjct: 158 SLGNLSNLSRLDLVGNNLNKLPDFLGNFYKLTELYLWNNQLTHLPESLGNILNLSKLHLW 217

Query: 277 DNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQ-EHLPQNLV 320
           +N L        TY P S+  L++  L   ++ Y+Q   LP+N+V
Sbjct: 218 NNQL--------TYLPKSIGNLSN--LTSLDLSYNQLSKLPENIV 252



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 96/188 (51%), Gaps = 4/188 (2%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN- 100
           QI  LP  ++     N+  L L  NNL   P++  +  NL+ L LS N++  LP ++ N 
Sbjct: 81  QITKLPQKNFGNFI-NLIELDLSKNNLINLPESLGELPNLKKLYLSRNQLKKLPVSLGNL 139

Query: 101 FPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
           + L+ L    N L   + P+ + NL NL   +L GN L + P  + +   L  LYL NN 
Sbjct: 140 YNLTELDLSLNKLN--TFPESLGNLSNLSRLDLVGNNLNKLPDFLGNFYKLTELYLWNNQ 197

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L H+P  +  +  L  L L  N LT +P + G+L  L +L LS NQL  LP +I NL  L
Sbjct: 198 LTHLPESLGNILNLSKLHLWNNQLTYLPKSIGNLSNLTSLDLSYNQLSKLPENIVNLSNL 257

Query: 221 KSLLLHNN 228
             L L  N
Sbjct: 258 THLDLSGN 265



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 65/144 (45%), Gaps = 28/144 (19%)

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPD------------------------TFGDLYQ 196
           L ++P E+ +L ++ VL+L GN +  IP+                         FG+   
Sbjct: 36  LTNIPEEVFELKQIRVLNLSGNRIYQIPEYISNITNLVRLDLSRNQITKLPQKNFGNFIN 95

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
           L  L LS N L +LP S+  L  LK L L  N+L+ LP  +  L  L+E    L L  NK
Sbjct: 96  LIELDLSKNNLINLPESLGELPNLKKLYLSRNQLKKLPVSLGNLYNLTE----LDLSLNK 151

Query: 257 LRTLPTEIITLKCLSELSLRDNPL 280
           L T P  +  L  LS L L  N L
Sbjct: 152 LNTFPESLGNLSNLSRLDLVGNNL 175


>gi|260788642|ref|XP_002589358.1| hypothetical protein BRAFLDRAFT_77807 [Branchiostoma floridae]
 gi|229274535|gb|EEN45369.1| hypothetical protein BRAFLDRAFT_77807 [Branchiostoma floridae]
          Length = 931

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/220 (31%), Positives = 115/220 (52%), Gaps = 7/220 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           +++ L +  N LS FP    K   LR L + +N++T +P  + + P L  L   NN L+ 
Sbjct: 129 SLEELDVSKNKLSTFPPGVEKLQKLRKLYIYDNQLTEVPSGVCSLPNLEVLGVGNNKLS- 187

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            + P  +  L+ L+  N+ GNQL + P  +  +P L+ L  GNN L+  P  + KL KL 
Sbjct: 188 -TFPPGVEKLQKLRELNIYGNQLTEVPPGVCSLPNLEVLNFGNNKLSTFPPGVEKLQKLR 246

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L +  N LT++P     L  LE L + +N+L + P  +  L+ L+ L +HNN+L  +P+
Sbjct: 247 DLYIYDNQLTEVPSGVCSLPNLEGLSVYNNKLSTFPPGVEKLQKLRELYIHNNQLTEVPS 306

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            + +L      L+ L +  N +R LP ++  L  L  L +
Sbjct: 307 GVCSLP----NLEVLSVGMNPIRRLPDDVTRLTRLKTLGV 342



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 73/249 (29%), Positives = 123/249 (49%), Gaps = 23/249 (9%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L +Y N L+  P    K   L  L + +N++T +P  +   P L  L    N L+  + P
Sbjct: 87  LYVYRNKLANLPPGIEKLQKLTLLSIFDNQLTKVPPGVCMLPSLEELDVSKNKLS--TFP 144

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             +  L+ L+   +  NQL + P  +  +P L+ L +GNN L+  P  + KL KL  L++
Sbjct: 145 PGVEKLQKLRKLYIYDNQLTEVPSGVCSLPNLEVLGVGNNKLSTFPPGVEKLQKLRELNI 204

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
            GN LT++P     L  LE L   +N+L + P  +  L+ L+ L +++N+L  +P+ + +
Sbjct: 205 YGNQLTEVPPGVCSLPNLEVLNFGNNKLSTFPPGVEKLQKLRDLYIYDNQLTEVPSGVCS 264

Query: 240 LKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L  L                    +KL+ L +HNN+L  +P+ + +L  L  LS+  NP 
Sbjct: 265 LPNLEGLSVYNNKLSTFPPGVEKLQKLRELYIHNNQLTEVPSGVCSLPNLEVLSVGMNP- 323

Query: 281 VIRFVSDMT 289
           + R   D+T
Sbjct: 324 IRRLPDDVT 332



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/247 (27%), Positives = 123/247 (49%), Gaps = 13/247 (5%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L +Y+N LS FP    K   LR L + NN++T +P  + + P L  L    N +  
Sbjct: 267 NLEGLSVYNNKLSTFPPGVEKLQKLRELYIHNNQLTEVPSGVCSLPNLEVLSVGMNPI-- 324

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP D++ L  LK   +   Q ++FP Q+L + TL+ LY G    + VP E+  L  L 
Sbjct: 325 RRLPDDVTRLTRLKTLGVPNCQFDEFPRQMLQLKTLQKLYAGGCKFDMVPDEVGNLQHLW 384

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L++  N L  +P T   L+ L  + L +N+ +++P  +  L  ++ L++ NN +  LPT
Sbjct: 385 FLAVENNLLRTLPSTMSHLHNLRVIQLWNNKFDTVPEVLCELPAMEKLVIRNNNITRLPT 444

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
            +      ++KL+ L +  N L   P ++      + ++       ++  ++   + P +
Sbjct: 445 VLHR----ADKLRDLDISGNPLTYPPQDVCKQGTGAIMAF------LKQEAEKASRQPDI 494

Query: 296 LELASRT 302
           +E A+ T
Sbjct: 495 MEPAAET 501



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/254 (29%), Positives = 125/254 (49%), Gaps = 29/254 (11%)

Query: 52  NKKPENID---TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLI 107
           N +P+ +D   TL L +  L+  P+     T+L +LDLSNN++T +P+AI     L  L 
Sbjct: 6   NLQPQTVDGRLTLDLTNQGLTSIPEEVFDITDLEALDLSNNKLTSIPEAIGRLQKLYRLE 65

Query: 108 ARNNLLTA---------------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQIL 146
              N+LT+                      +LP  +  L+ L + ++  NQL + P  + 
Sbjct: 66  VHANMLTSLPQAIVTLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIFDNQLTKVPPGVC 125

Query: 147 DIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQ 206
            +P+L+ L +  N L+  P  + KL KL  L +  N LT++P     L  LE L + +N+
Sbjct: 126 MLPSLEELDVSKNKLSTFPPGVEKLQKLRKLYIYDNQLTEVPSGVCSLPNLEVLGVGNNK 185

Query: 207 LESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIIT 266
           L + P  +  L+ L+ L ++ N+L  +P  + +L      L+ L   NNKL T P  +  
Sbjct: 186 LSTFPPGVEKLQKLRELNIYGNQLTEVPPGVCSLP----NLEVLNFGNNKLSTFPPGVEK 241

Query: 267 LKCLSELSLRDNPL 280
           L+ L +L + DN L
Sbjct: 242 LQKLRDLYIYDNQL 255



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 120/248 (48%), Gaps = 30/248 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L   +N LS FP    K   LR L + +N++T +P  + + P L  L   NN L+ 
Sbjct: 221 NLEVLNFGNNKLSTFPPGVEKLQKLRDLYIYDNQLTEVPSGVCSLPNLEGLSVYNNKLS- 279

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            + P  +  L+ L+   +  NQL + P  +  +P L+ L +G N +  +P ++ +L +L 
Sbjct: 280 -TFPPGVEKLQKLRELYIHNNQLTEVPSGVCSLPNLEVLSVGMNPIRRLPDDVTRLTRLK 338

Query: 176 VLSL-----------------------GGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            L +                       GG     +PD  G+L  L  L + +N L +LP+
Sbjct: 339 TLGVPNCQFDEFPRQMLQLKTLQKLYAGGCKFDMVPDEVGNLQHLWFLAVENNLLRTLPS 398

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSE 272
           ++S+L  L+ + L NNK  T+P E++   C    ++ L++ NN +  LPT +     L +
Sbjct: 399 TMSHLHNLRVIQLWNNKFDTVP-EVL---CELPAMEKLVIRNNNITRLPTVLHRADKLRD 454

Query: 273 LSLRDNPL 280
           L +  NPL
Sbjct: 455 LDISGNPL 462



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 115/242 (47%), Gaps = 22/242 (9%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L + +N LS FP    K   LR L++  N++T +P  + + P L  L   NN L+ 
Sbjct: 175 NLEVLGVGNNKLSTFPPGVEKLQKLRELNIYGNQLTEVPPGVCSLPNLEVLNFGNNKLS- 233

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            + P  +  L+ L+   +  NQL + P  +  +P L+ L + NN L+  P  + KL KL 
Sbjct: 234 -TFPPGVEKLQKLRDLYIYDNQLTEVPSGVCSLPNLEGLSVYNNKLSTFPPGVEKLQKLR 292

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L +  N LT++P     L  LE L +  N +  LP  ++ L  LK+L + N +    P 
Sbjct: 293 ELYIHNNQLTEVPSGVCSLPNLEVLSVGMNPIRRLPDDVTRLTRLKTLGVPNCQFDEFPR 352

Query: 236 EIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           +++ LK L                    + L  L + NN LRTLP+ +  L  L  + L 
Sbjct: 353 QMLQLKTLQKLYAGGCKFDMVPDEVGNLQHLWFLAVENNLLRTLPSTMSHLHNLRVIQLW 412

Query: 277 DN 278
           +N
Sbjct: 413 NN 414


>gi|417766182|ref|ZP_12414136.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
 gi|400351636|gb|EJP03855.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bulgarica str. Mallika]
          Length = 423

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/244 (39%), Positives = 130/244 (53%), Gaps = 16/244 (6%)

Query: 38  TLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQA 97
           +L T+IE L      K  +N+D   L HN L+           L +LDL +N++  +P+ 
Sbjct: 170 SLPTEIEQL------KSLKNLD---LNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKE 220

Query: 98  ITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL 156
           I     L  L+   N LT  SLPK++  L+NLK  NL  N+ + FP++IL++  L  L L
Sbjct: 221 IRQLKSLKVLMLTGNQLT--SLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNL 278

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
             N L   P+E+ +L  L  LSL  N +T +P     L  L+ L LS N++  LP  I  
Sbjct: 279 YYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQ 338

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           LK L+ L L NNKL  LP EI  LK    KL+ L L NN+L TLP EI  LK L  L L 
Sbjct: 339 LKNLEWLSLSNNKLNALPKEIGQLK----KLQRLELGNNQLTTLPKEIEQLKNLQRLELD 394

Query: 277 DNPL 280
            NP+
Sbjct: 395 SNPI 398



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 83/229 (36%), Positives = 119/229 (51%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L L    L   P+   +  NL+ LDL  N  T L + I     L  L   NN L
Sbjct: 40  PADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKL 99

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++  L+NL+  +L  N+L   P +I     L+ L L NN L  +P+EI +L  
Sbjct: 100 TV--LPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQN 157

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  LSL  N L  +P     L  L+ L L+ N+L ++   +  L+ L++L L +NKL+T+
Sbjct: 158 LQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSNKLKTI 217

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK     LK L+L  N+L +LP EI  L+ L  L+L +N   I
Sbjct: 218 PKEIRQLKS----LKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQI 262



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 124/247 (50%), Gaps = 22/247 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +++  L L +N L+  P    +  NL+ L L +N + +LP+ I  F  L  L   NN LT
Sbjct: 87  KDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLT 146

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+  +L  N+L   P +I  + +LK L L +N L  V +E+  L  L
Sbjct: 147 V--LPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETL 204

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  IP     L  L+ L+L+ NQL SLP  I  L+ LK+L L  N+ +  P
Sbjct: 205 ENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFP 264

Query: 235 TEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            EI+ LK L                    + LK L L++N++ TLP E+  L  L EL L
Sbjct: 265 VEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHL 324

Query: 276 RDNPLVI 282
             N + I
Sbjct: 325 SGNKITI 331



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 96/190 (50%), Gaps = 4/190 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++L K + N  +++  +LS   L+  P +I  +  L+ L LG N    + +EI +L  L 
Sbjct: 31  KNLAKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQ 90

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L+L  N LT +P   G L  L+ L L  N+L +LP  I   K L+ L L NNKL  LP 
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPK 150

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
           EI  L+ L E    L L +NKL +LPTEI  LK L  L L  N L       M  +    
Sbjct: 151 EIGQLQNLQE----LSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLEN 206

Query: 296 LELASRTLKV 305
           L+L S  LK 
Sbjct: 207 LDLRSNKLKT 216



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 3/123 (2%)

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDM 122
           Y+N L  FP    +  +L+ L L +N+IT LP  +T  P L  L    N +T   LPK++
Sbjct: 279 YYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITI--LPKEI 336

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             LKNL+  +LS N+L   P +I  +  L+ L LGNN L  +P+EI +L  L  L L  N
Sbjct: 337 LQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSN 396

Query: 183 SLT 185
            ++
Sbjct: 397 PIS 399



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 5/113 (4%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           LYHN ++  P   ++  +L+ L LS N+IT LP+ I     L  L   NN L A  LPK+
Sbjct: 301 LYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNA--LPKE 358

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           +  LK L+   L  NQL   P +I  +  L+ L L +N ++  P+E  ++ KL
Sbjct: 359 IGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS--PKEKERIRKL 409


>gi|294828114|ref|NP_712633.2| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386074469|ref|YP_005988786.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|293385961|gb|AAN49651.2| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353458258|gb|AER02803.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 265

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/224 (34%), Positives = 119/224 (53%), Gaps = 28/224 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           ++  L+L    L+  P    +  NL+ LDL  N+                         +
Sbjct: 51  DVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQF------------------------K 86

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++PK++  LKNL++ +L  NQ +  P +I  +  L+ L L +N L  +P+EI KL  L V
Sbjct: 87  TVPKEIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQV 146

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+L  N L   P   G L  L+ L L  N+L++LP  I  LK L++L L+ N+L TLP E
Sbjct: 147 LNLSSNQLITFPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPRE 206

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L+ L++    L L +N++ TLP EII L+ L +L+L +NP+
Sbjct: 207 IGRLQSLTK----LHLQHNQIATLPDEIIQLQNLRKLTLYENPI 246



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 40/108 (37%), Positives = 58/108 (53%), Gaps = 4/108 (3%)

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           + +L L    LT +P     L  L+ L L  NQ +++P  I  LK L+ L L  N+ +T+
Sbjct: 52  VRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQFKTV 111

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P +I  LK     L+ L L +N+L TLP EI  L+ L  L+L  N L+
Sbjct: 112 PKKIGQLK----NLQVLNLSSNQLTTLPKEIGKLENLQVLNLSSNQLI 155


>gi|260825680|ref|XP_002607794.1| hypothetical protein BRAFLDRAFT_275098 [Branchiostoma floridae]
 gi|229293143|gb|EEN63804.1| hypothetical protein BRAFLDRAFT_275098 [Branchiostoma floridae]
          Length = 553

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 120/242 (49%), Gaps = 25/242 (10%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           NI  L L+ N++   P +  +   LR ++ SNN+I  LP+ +     L  L A++N L  
Sbjct: 233 NIAVLELHGNHVKEIPPDICRLAKLREVNFSNNKIEKLPKEVGALVNLEVLYAKSNFL-- 290

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           +SLPK    L+ L+  + + N+ E+ P+ +  +  L  L + +N+L H+P+E+  L KL 
Sbjct: 291 KSLPKAFGRLQRLRFVDFAQNRFEEMPVSLCMLGNLAVLAMDDNNLYHIPKEVANLRKLK 350

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDN---QLESLPASISNLKMLKSLLLHNNKLRT 232
            L L GN     P+   +L  LE L L  +   QL S+P++IS L  L+ L L  N L T
Sbjct: 351 ELGLSGNVFEKFPEAICNLPSLEKLFLGQDHGQQLTSVPSTISKLTSLQDLCLEYNALTT 410

Query: 233 LPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           LP  I  L  LS                   + LK L LHNN L  LP++   L  L EL
Sbjct: 411 LPDSISQLPALSRLSCHDNYLQKLPDSICELKALKYLYLHNNLLTALPSDFDFLTTLKEL 470

Query: 274 SL 275
            +
Sbjct: 471 RI 472



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 77/208 (37%), Positives = 107/208 (51%), Gaps = 12/208 (5%)

Query: 48  NNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           NN   K P+      N++ L    N L   P    +   LR +D + NR   +P ++   
Sbjct: 264 NNKIEKLPKEVGALVNLEVLYAKSNFLKSLPKAFGRLQRLRFVDFAQNRFEEMPVSLCML 323

Query: 102 P-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN- 159
             L+ L   +N L    +PK+++NL+ LK   LSGN  E+FP  I ++P+L+ L+LG + 
Sbjct: 324 GNLAVLAMDDNNLY--HIPKEVANLRKLKELGLSGNVFEKFPEAICNLPSLEKLFLGQDH 381

Query: 160 --SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
              L  VP  I+KL  L  L L  N+LT +PD+   L  L  L   DN L+ LP SI  L
Sbjct: 382 GQQLTSVPSTISKLTSLQDLCLEYNALTTLPDSISQLPALSRLSCHDNYLQKLPDSICEL 441

Query: 218 KMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           K LK L LHNN L  LP++   L  L E
Sbjct: 442 KALKYLYLHNNLLTALPSDFDFLTTLKE 469



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 96/301 (31%), Positives = 143/301 (47%), Gaps = 36/301 (11%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
            + L   PD   + T+L  L L  N +  LP  I     L+TL    N L  E+LP ++ 
Sbjct: 32  QHGLEGLPDRLWELTDLEELHLEKNHLKELPDNIKLLKNLTTLYLHGNDL--ETLPPEVG 89

Query: 124 NLKNLKVFNLSGNQLEQFPIQ-ILDIPTLKYLYLGNNSLNHVPREINK-LCKLHVLSLGG 181
            L +L+  ++S N   + P++ +L +  LK L L N  L  VP +I K L  L +L L G
Sbjct: 90  QLGHLESLDVSNNPEFKIPLEHLLQLRQLKVLRLHNLHLGQVPEDILKWLLNLEILGLNG 149

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L D+P     L +L+ L L +N   +LP  + +L  L +L L  NKL  LP EI+ L 
Sbjct: 150 NQLVDLPIYTVRLNKLKELHLRNNNFSTLPVHVCSLSALTTLDLEGNKLHDLPNEIVQLV 209

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASR 301
            L E    + L NN    LP ++  L  ++ L L  N      V ++   PP +  LA  
Sbjct: 210 NLQE----VYLQNNFFHHLPVQLCALGNIAVLELHGN-----HVKEI---PPDICRLA-- 255

Query: 302 TLKVHEIDYSQ---EHLPQNL-------VQYLESAHHCVNPKCKGVFFDNRIEHIKFVDF 351
             K+ E+++S    E LP+ +       V Y +S      PK  G     R++ ++FVDF
Sbjct: 256 --KLREVNFSNNKIEKLPKEVGALVNLEVLYAKSNFLKSLPKAFG-----RLQRLRFVDF 308

Query: 352 C 352
            
Sbjct: 309 A 309



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/226 (30%), Positives = 103/226 (45%), Gaps = 7/226 (3%)

Query: 51  YNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIAR 109
           Y  +   +  L L +NN S  P +    + L +LDL  N++  LP  I     L  +  +
Sbjct: 158 YTVRLNKLKELHLRNNNFSTLPVHVCSLSALTTLDLEGNKLHDLPNEIVQLVNLQEVYLQ 217

Query: 110 NNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREIN 169
           NN      LP  +  L N+ V  L GN +++ P  I  +  L+ +   NN +  +P+E+ 
Sbjct: 218 NNFF--HHLPVQLCALGNIAVLELHGNHVKEIPPDICRLAKLREVNFSNNKIEKLPKEVG 275

Query: 170 KLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
            L  L VL    N L  +P  FG L +L  +  + N+ E +P S+  L  L  L + +N 
Sbjct: 276 ALVNLEVLYAKSNFLKSLPKAFGRLQRLRFVDFAQNRFEEMPVSLCMLGNLAVLAMDDNN 335

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
           L  +P E+  L+    KLK L L  N     P  I  L  L +L L
Sbjct: 336 LYHIPKEVANLR----KLKELGLSGNVFEKFPEAICNLPSLEKLFL 377



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 114/225 (50%), Gaps = 7/225 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLP-QAITNFPLSTLIARNNLLT 114
           +N+ TL L+ N+L   P    +  +L SLD+SNN    +P + +       ++  +NL  
Sbjct: 69  KNLTTLYLHGNDLETLPPEVGQLGHLESLDVSNNPEFKIPLEHLLQLRQLKVLRLHNLHL 128

Query: 115 AESLPKD-MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
            + +P+D +  L NL++  L+GNQL   PI  + +  LK L+L NN+ + +P  +  L  
Sbjct: 129 GQ-VPEDILKWLLNLEILGLNGNQLVDLPIYTVRLNKLKELHLRNNNFSTLPVHVCSLSA 187

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L GN L D+P+    L  L+ + L +N    LP  +  L  +  L LH N ++ +
Sbjct: 188 LTTLDLEGNKLHDLPNEIVQLVNLQEVYLQNNFFHHLPVQLCALGNIAVLELHGNHVKEI 247

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P +I    C   KL+ +   NNK+  LP E+  L  L  L  + N
Sbjct: 248 PPDI----CRLAKLREVNFSNNKIEKLPKEVGALVNLEVLYAKSN 288


>gi|307178161|gb|EFN66969.1| Leucine-rich repeat protein SHOC-2 [Camponotus floridanus]
          Length = 624

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/244 (36%), Positives = 133/244 (54%), Gaps = 11/244 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNA-SKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           ++ T+ L  NN + +P    S+FTN+ S++L +N+I  +P AI +    L+ L  + N L
Sbjct: 375 DLTTITLSRNNFTAYPSGGPSQFTNVYSINLEHNKIDKIPYAIFSRAKNLTKLNMKENQL 434

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA  LP D+    N+   NL  NQL + P  I  + +L+ L L NN L  +P  I  L K
Sbjct: 435 TA--LPLDIGTWVNMVELNLGTNQLMKIPDDIQYLKSLEILILSNNLLKRIPATIANLRK 492

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L VL L  N +  +P+  G L +L+ LIL  NQ+ SLP +I +L  L  L +  N L  L
Sbjct: 493 LRVLDLEENRIDSLPNEIGFLRELQKLILQSNQVVSLPRAIGHLTNLTYLSVGENNLNYL 552

Query: 234 PTEIITLKCLSEKLKSLLLHNNK-LRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKP 292
           P EI TL    E L+SL +++N  L  LP E+     LS +S+ + PL  +  +++    
Sbjct: 553 PEEIGTL----ENLESLYINDNANLHNLPFELALCTNLSIMSIENCPLS-QIPAEIVAGG 607

Query: 293 PSLL 296
           PSL+
Sbjct: 608 PSLV 611



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 110/226 (48%), Gaps = 7/226 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           + E +  L L   +++  P +  + T+LR   +  N++  LP  I     L TL    N 
Sbjct: 141 REECVKRLDLSKASITNLPSSVRELTHLREFYIYGNKLATLPPEIGCLANLETLALSENS 200

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  SLP  + NLK+L+V +L  N+L + P  +  + +L  L+L  N + +V   I  L 
Sbjct: 201 LT--SLPNTLENLKSLRVLDLRHNKLNEIPDVVYKLTSLTTLFLRFNRVKYVNDNIRYLT 258

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L +LSL  N + ++P   G+L  L    +S N LE LP  I N   L +L L +N+L  
Sbjct: 259 NLTMLSLRENKIKELPAGVGELVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLD 318

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           +P  I  L  L+     L L  N+L  +P  +   K + E S+  N
Sbjct: 319 IPDTIGNLVSLTR----LGLRYNRLSNIPKSLANCKMMDEFSVEGN 360



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 79/266 (29%), Positives = 126/266 (47%), Gaps = 38/266 (14%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ T  + HN+L   P+       L +LDL +N +  +P  I N   L+ L  R N L+ 
Sbjct: 282 NLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIGNLVSLTRLGLRYNRLS- 340

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQIL----DIPTLKY------------------ 153
            ++PK ++N K +  F++ GNQ+   P  +L    D+ T+                    
Sbjct: 341 -NIPKSLANCKMMDEFSVEGNQVSHLPDGLLSSLSDLTTITLSRNNFTAYPSGGPSQFTN 399

Query: 154 ---LYLGNNSLNHVPREINKLCK-LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
              + L +N ++ +P  I    K L  L++  N LT +P   G    +  L L  NQL  
Sbjct: 400 VYSINLEHNKIDKIPYAIFSRAKNLTKLNMKENQLTALPLDIGTWVNMVELNLGTNQLMK 459

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           +P  I  LK L+ L+L NN L+ +P  I  L+    KL+ L L  N++ +LP EI  L+ 
Sbjct: 460 IPDDIQYLKSLEILILSNNLLKRIPATIANLR----KLRVLDLEENRIDSLPNEIGFLRE 515

Query: 270 LSELSLRDN-----PLVIRFVSDMTY 290
           L +L L+ N     P  I  ++++TY
Sbjct: 516 LQKLILQSNQVVSLPRAIGHLTNLTY 541



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 11/164 (6%)

Query: 34  LDSETLATQIEL-LPNNDYNKKPENI------DTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           LD  T    +EL L  N   K P++I      + L+L +N L   P   +    LR LDL
Sbjct: 439 LDIGTWVNMVELNLGTNQLMKIPDDIQYLKSLEILILSNNLLKRIPATIANLRKLRVLDL 498

Query: 87  SNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI 145
             NRI  LP  I     L  LI ++N +   SLP+ + +L NL   ++  N L   P +I
Sbjct: 499 EENRIDSLPNEIGFLRELQKLILQSNQVV--SLPRAIGHLTNLTYLSVGENNLNYLPEEI 556

Query: 146 LDIPTLKYLYLGNNS-LNHVPREINKLCKLHVLSLGGNSLTDIP 188
             +  L+ LY+ +N+ L+++P E+     L ++S+    L+ IP
Sbjct: 557 GTLENLESLYINDNANLHNLPFELALCTNLSIMSIENCPLSQIP 600


>gi|348506994|ref|XP_003441042.1| PREDICTED: leucine-rich repeat-containing protein 1 [Oreochromis
           niloticus]
          Length = 524

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 90/266 (33%), Positives = 140/266 (52%), Gaps = 17/266 (6%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF- 101
           ++LLP N  N    N+ +L L  N L+F P++ S+   L  LDL NN +  LPQ+I +  
Sbjct: 140 LQLLPGNIGNLS--NLVSLELRENVLTFLPESLSQLHKLEELDLGNNELYSLPQSIGHLV 197

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L  L    N LT   +P ++ N+K+L   ++S N+LE+ P ++  + +L  L +  N++
Sbjct: 198 SLKDLWLDGNHLT--EIPAELGNIKSLLCLDVSENKLEKLPEEMGGLVSLTDLLVSQNNI 255

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
           + +P  I KL KL +L +  N L  +P++ G+   L  L+L++NQL+SLP SI  LK L 
Sbjct: 256 DSLPESIGKLRKLSILKVDQNQLAYLPESIGNCESLSELVLTENQLQSLPRSIGKLKRLF 315

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L    N+L +LP EI    C S  L    +  N+L  +P+E+     L  L +  N L 
Sbjct: 316 HLNCDRNQLLSLPKEIG--GCSS--LNVFCVRENRLTRIPSELSQATELHVLDVSGNRL- 370

Query: 282 IRFVSDMTYKPPSLLELASRTLKVHE 307
                  T+ P SL  L  + L + E
Sbjct: 371 -------THLPLSLTTLQLKALWLSE 389



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 89/265 (33%), Positives = 137/265 (51%), Gaps = 20/265 (7%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTA 115
           ++ LLL  N L   P    +   LR L LS+N I  +P  I NF  L  L ++RN++L  
Sbjct: 38  LEELLLDANQLRDLPKQFFQLVKLRKLGLSDNEIQIIPAEIANFMQLVELDVSRNDIL-- 95

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P  +S+ K L+V + SGN L + P    ++  L  L + + SL  +P  I  L  L 
Sbjct: 96  -GIPDSISHCKALQVADFSGNPLTKLPESFTELRNLTCLSINDISLQLLPGNIGNLSNLV 154

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +P++   L++LE L L +N+L SLP SI +L  LK L L  N L  +P 
Sbjct: 155 SLELRENVLTFLPESLSQLHKLEELDLGNNELYSLPQSIGHLVSLKDLWLDGNHLTEIPA 214

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
           E+  +K     L  L +  NKL  LP E+  L  L++L +  N        ++   P S+
Sbjct: 215 ELGNIK----SLLCLDVSENKLEKLPEEMGGLVSLTDLLVSQN--------NIDSLPESI 262

Query: 296 LELASRTLKVHEIDYSQ-EHLPQNL 319
            +L  R L + ++D +Q  +LP+++
Sbjct: 263 GKL--RKLSILKVDQNQLAYLPESI 285



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 111/216 (51%), Gaps = 5/216 (2%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSN 124
            N++   PD+ S    L+  D S N +T LP++ T     T ++ N++ + + LP ++ N
Sbjct: 91  RNDILGIPDSISHCKALQVADFSGNPLTKLPESFTELRNLTCLSINDI-SLQLLPGNIGN 149

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L NL    L  N L   P  +  +  L+ L LGNN L  +P+ I  L  L  L L GN L
Sbjct: 150 LSNLVSLELRENVLTFLPESLSQLHKLEELDLGNNELYSLPQSIGHLVSLKDLWLDGNHL 209

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T+IP   G++  L  L +S+N+LE LP  +  L  L  LL+  N + +LP  I  L+   
Sbjct: 210 TEIPAELGNIKSLLCLDVSENKLEKLPEEMGGLVSLTDLLVSQNNIDSLPESIGKLR--- 266

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            KL  L +  N+L  LP  I   + LSEL L +N L
Sbjct: 267 -KLSILKVDQNQLAYLPESIGNCESLSELVLTENQL 301



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 104/221 (47%), Gaps = 35/221 (15%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN+    P++I  L+      L  N+L+  P       +L  LD+S N++  LP+ + 
Sbjct: 181 LGNNELYSLPQSIGHLVSLKDLWLDGNHLTEIPAELGNIKSLLCLDVSENKLEKLPEEMG 240

Query: 100 NFPLST--LIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
                T  L+++NN+   +SLP+ +  L+ L +  +  NQL   P  I +  +L  L L 
Sbjct: 241 GLVSLTDLLVSQNNI---DSLPESIGKLRKLSILKVDQNQLAYLPESIGNCESLSELVLT 297

Query: 158 NNSLNHVPREINKLCKL--------HVLSL----GG-----------NSLTDIPDTFGDL 194
            N L  +PR I KL +L         +LSL    GG           N LT IP      
Sbjct: 298 ENQLQSLPRSIGKLKRLFHLNCDRNQLLSLPKEIGGCSSLNVFCVRENRLTRIPSELSQA 357

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            +L  L +S N+L  LP S++ L+ LK+L L  N+ + L T
Sbjct: 358 TELHVLDVSGNRLTHLPLSLTTLQ-LKALWLSENQSQPLLT 397


>gi|345319947|ref|XP_001520433.2| PREDICTED: malignant fibrous histiocytoma-amplified sequence
           1-like, partial [Ornithorhynchus anatinus]
          Length = 461

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/247 (32%), Positives = 117/247 (47%), Gaps = 26/247 (10%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
            +  L L HN L+  P       +L  LDLS NR+  LP ++     L TL   +N LTA
Sbjct: 109 QLRKLCLGHNQLAALPARLGALVHLEELDLSFNRLAGLPDSLACLRRLRTLDVDHNQLTA 168

Query: 116 ---------------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYL 154
                                  LP+++  L+ LK+  LSG +L + P    ++  L+ L
Sbjct: 169 FPRPLLALAALEELDVSGNRLGRLPEEIGALRALKILWLSGAELAELPGGFCELAGLESL 228

Query: 155 YLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASI 214
            L NN L  +P   + L +L  L L  N L + P     L  LE L LS N+L ++PA I
Sbjct: 229 MLDNNRLRALPPRFSLLHRLKTLDLSSNLLEEFPGALLPLAGLEELYLSRNRLSAVPALI 288

Query: 215 SNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           + L  L +L L +N+LR LP  I+ L  L E    L+L  N++  LP +   L  +    
Sbjct: 289 AGLGRLLALWLDHNRLRYLPDAIVELAGLEE----LVLQGNQIAVLPEDFGQLTRVGLWK 344

Query: 275 LRDNPLV 281
           +RDNPL+
Sbjct: 345 IRDNPLI 351



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 79/241 (32%), Positives = 115/241 (47%), Gaps = 23/241 (9%)

Query: 63  LYHNNLSFFPDNA-SKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPK 120
           L HN LS   D A      LR L L +N++  LP  +     L  L    N L    LP 
Sbjct: 91  LSHNRLSGLGDEAVGALGQLRKLCLGHNQLAALPARLGALVHLEELDLSFNRLA--GLPD 148

Query: 121 DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
            ++ L+ L+  ++  NQL  FP  +L +  L+ L +  N L  +P EI  L  L +L L 
Sbjct: 149 SLACLRRLRTLDVDHNQLTAFPRPLLALAALEELDVSGNRLGRLPEEIGALRALKILWLS 208

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           G  L ++P  F +L  LE+L+L +N+L +LP   S L  LK+L L +N L   P  ++ L
Sbjct: 209 GAELAELPGGFCELAGLESLMLDNNRLRALPPRFSLLHRLKTLDLSSNLLEEFPGALLPL 268

Query: 241 KCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             L E                   +L +L L +N+LR LP  I+ L  L EL L+ N + 
Sbjct: 269 AGLEELYLSRNRLSAVPALIAGLGRLLALWLDHNRLRYLPDAIVELAGLEELVLQGNQIA 328

Query: 282 I 282
           +
Sbjct: 329 V 329



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/173 (34%), Positives = 80/173 (46%), Gaps = 3/173 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L   P+       L+ L LS   +  LP        L +L+  NN L A  LP   S 
Sbjct: 187 NRLGRLPEEIGALRALKILWLSGAELAELPGGFCELAGLESLMLDNNRLRA--LPPRFSL 244

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L  LK  +LS N LE+FP  +L +  L+ LYL  N L+ VP  I  L +L  L L  N L
Sbjct: 245 LHRLKTLDLSSNLLEEFPGALLPLAGLEELYLSRNRLSAVPALIAGLGRLLALWLDHNRL 304

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
             +PD   +L  LE L+L  NQ+  LP     L  +    + +N L   P E+
Sbjct: 305 RYLPDAIVELAGLEELVLQGNQIAVLPEDFGQLTRVGLWKIRDNPLIQPPYEV 357


>gi|456824532|gb|EMF72958.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 423

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 97/244 (39%), Positives = 130/244 (53%), Gaps = 16/244 (6%)

Query: 38  TLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQA 97
           +L T+IE L      K  +N+D   L HN L+           L +LDL +N++  +P+ 
Sbjct: 170 SLPTEIEQL------KSLKNLD---LNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKE 220

Query: 98  ITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL 156
           I     L  L+   N LT  SLPK++  L+NLK  NL  N+ + FP++IL++  L  L L
Sbjct: 221 IRQLKSLKVLMLTGNQLT--SLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNL 278

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
             N L   P+E+ +L  L  LSL  N +T +P     L  L+ L LS N++  LP  I  
Sbjct: 279 YYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQ 338

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           LK L+ L L NNKL  LP EI  LK    KL+ L L NN+L TLP EI  LK L  L L 
Sbjct: 339 LKNLEWLSLSNNKLNALPKEIGQLK----KLQRLELGNNQLTTLPKEIEQLKNLQRLELD 394

Query: 277 DNPL 280
            NP+
Sbjct: 395 SNPI 398



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 84/229 (36%), Positives = 119/229 (51%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P +I  L L    L   P+   +  NL+ LDL  N  T L + I     L  L   NN L
Sbjct: 40  PADIRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKL 99

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++  L+NL+  +L  N+L   P +I     L+ L L NN L  +P+EI +L  
Sbjct: 100 TV--LPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQN 157

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  LSL  N L  +P     L  L+ L L+ N+L ++   +  L+ L++L L +NKL+T+
Sbjct: 158 LQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSNKLKTI 217

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK     LK L+L  N+L +LP EI  L+ L  L+L +N   I
Sbjct: 218 PKEIRQLKS----LKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQI 262



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 124/247 (50%), Gaps = 22/247 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +++  L L +N L+  P    +  NL+ L L +N + +LP+ I  F  L  L   NN LT
Sbjct: 87  KDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLT 146

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+  +L  N+L   P +I  + +LK L L +N L  V +E+  L  L
Sbjct: 147 V--LPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETL 204

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  IP     L  L+ L+L+ NQL SLP  I  L+ LK+L L  N+ +  P
Sbjct: 205 ENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFP 264

Query: 235 TEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            EI+ LK L                    + LK L L++N++ TLP E+  L  L EL L
Sbjct: 265 VEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHL 324

Query: 276 RDNPLVI 282
             N + I
Sbjct: 325 SGNKITI 331



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 96/190 (50%), Gaps = 4/190 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++L K + N  +++  +LS   L+  P +I  +  L+ L LG N    + +EI +L  L 
Sbjct: 31  KNLAKALQNPADIRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQ 90

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L+L  N LT +P   G L  L+ L L  N+L +LP  I   K L+ L L NNKL  LP 
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPK 150

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
           EI  L+ L E    L L +NKL +LPTEI  LK L  L L  N L       M  +    
Sbjct: 151 EIGQLQNLQE----LSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLEN 206

Query: 296 LELASRTLKV 305
           L+L S  LK 
Sbjct: 207 LDLRSNKLKT 216



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 3/123 (2%)

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDM 122
           Y+N L  FP    +  +L+ L L +N+IT LP  +T  P L  L    N +T   LPK++
Sbjct: 279 YYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITI--LPKEI 336

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             LKNL+  +LS N+L   P +I  +  L+ L LGNN L  +P+EI +L  L  L L  N
Sbjct: 337 LQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSN 396

Query: 183 SLT 185
            ++
Sbjct: 397 PIS 399



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 5/113 (4%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           LYHN ++  P   ++  +L+ L LS N+IT LP+ I     L  L   NN L A  LPK+
Sbjct: 301 LYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNA--LPKE 358

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           +  LK L+   L  NQL   P +I  +  L+ L L +N ++  P+E  ++ KL
Sbjct: 359 IGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS--PKEKERIRKL 409


>gi|386766567|ref|NP_001247318.1| scribbled, isoform K [Drosophila melanogaster]
 gi|383292966|gb|AFH06635.1| scribbled, isoform K [Drosophila melanogaster]
          Length = 2331

 Score =  109 bits (273), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 85/251 (33%), Positives = 127/251 (50%), Gaps = 15/251 (5%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           +++L L  N L   P+  S+ T L+ LDL +N I  LP  +   P L  L   +N L  +
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQL--Q 211

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            LP ++  L  L   ++S N+LE+ P +I  + +L  L L  N L  +P  I KL +L +
Sbjct: 212 RLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTI 271

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L  + DT G+   ++ LIL++N L  LPASI  +  L +L +  N L  LP E
Sbjct: 272 LKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLE 331

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
           I   +C +  L  L L +NKL+ LP E+     L  L +  N L+        Y P SL+
Sbjct: 332 I--GQCAN--LGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLL--------YLPYSLV 379

Query: 297 ELASRTLKVHE 307
            L  + + + E
Sbjct: 380 NLQLKAVWLSE 390



 Score =  106 bits (265), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 75/225 (33%), Positives = 115/225 (51%), Gaps = 9/225 (4%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTA 115
           ++ L L  N++   P N  +   LR L LS+N I  LP  I NF   +   ++RN++   
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDI--- 95

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P D+ +L++L+V + S N + + P     +  L  L L + SL  +P +   L +L 
Sbjct: 96  PDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLE 155

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L  +P+T   L +L+ L L DN++E LP  +  L  L  L L +N+L+ LP 
Sbjct: 156 SLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPP 215

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           E+  L     KL  L +  N+L  LP EI  L  L++L L  N L
Sbjct: 216 ELGLLT----KLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLL 256



 Score =  102 bits (253), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 83/241 (34%), Positives = 108/241 (44%), Gaps = 7/241 (2%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A  I  LP N +  +   +  L L  N +   P +   F NL  LD+S N I  +P  I 
Sbjct: 46  ANHIRDLPKNFF--RLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIK 103

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
           +   S  +A  +      LP   S LKNL V  L+   L   P     +  L+ L L  N
Sbjct: 104 HLQ-SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELREN 162

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L H+P  I++L KL  L LG N + D+P   G L  L  L L  NQL+ LP  +  L  
Sbjct: 163 LLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTK 222

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L  L +  N+L  LP EI  L  L++    L L  N L  LP  I  L  L+ L L  N 
Sbjct: 223 LTYLDVSENRLEELPNEISGLVSLTD----LDLAQNLLEALPDGIAKLSRLTILKLDQNR 278

Query: 280 L 280
           L
Sbjct: 279 L 279



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 90/199 (45%), Gaps = 27/199 (13%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L HN L   P      T L  LD+S NR+  LP  I+    L+ L    NLL  E+LP
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLL--EALP 260

Query: 120 KDMSNLKNLKVFNLSGNQLE-----------------------QFPIQILDIPTLKYLYL 156
             ++ L  L +  L  N+L+                       + P  I  +  L  L +
Sbjct: 261 DGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNV 320

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
             N+L ++P EI +   L VLSL  N L  +P   G+   L  L +S NQL  LP S+ N
Sbjct: 321 DRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVN 380

Query: 217 LKMLKSLLLHNNKLRTLPT 235
           L+ LK++ L  N+ + L T
Sbjct: 381 LQ-LKAVWLSENQSQPLLT 398



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 4/155 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           ++  L L  N L   PD  +K + L  L L  NR+  L   + N   +  LI   N L+ 
Sbjct: 245 SLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLS- 303

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP  +  +  L   N+  N LE  P++I     L  L L +N L  +P E+     LH
Sbjct: 304 -ELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLH 362

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           VL + GN L  +P +  +L QL+A+ LS+NQ + L
Sbjct: 363 VLDVSGNQLLYLPYSLVNL-QLKAVWLSENQSQPL 396



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 4/155 (2%)

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           + L+   L  N +   P     +  L+ L L +N +  +P +I     L  L +  N + 
Sbjct: 37  RTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIP 96

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           DIPD    L  L+    S N +  LP+  S LK L  L L++  L TLP +  +L     
Sbjct: 97  DIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLT---- 152

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +L+SL L  N L+ LP  I  L  L  L L DN +
Sbjct: 153 QLESLELRENLLKHLPETISQLTKLKRLDLGDNEI 187



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 4/112 (3%)

Query: 49  NDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLI 107
           ND     EN+  L+L  N LS  P +  + T L +L++  N + +LP  I     L  L 
Sbjct: 283 NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLS 342

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
            R+N L  + LP ++ N   L V ++SGNQL   P  ++++  LK ++L  N
Sbjct: 343 LRDNKL--KKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSEN 391


>gi|255081118|ref|XP_002504125.1| predicted protein [Micromonas sp. RCC299]
 gi|226519392|gb|ACO65383.1| predicted protein [Micromonas sp. RCC299]
          Length = 248

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 77/205 (37%), Positives = 108/205 (52%), Gaps = 7/205 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L+   N L+  P    K T+L  LDL +N++T +P AI     L  L   +N LT  SLP
Sbjct: 3   LVFCDNQLTSVPAEIGKLTSLERLDLRSNKLTTVPAAIWQLTSLERLELDDNKLT--SLP 60

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            ++  L +LK   L  N+L   P +I  + +L+ LYLG+N L  VP  I  L  L  L L
Sbjct: 61  AEIGQLTSLKSLWLERNRLMSLPAEIGQLASLEKLYLGDNQLKSVPAAIGHLTSLENLYL 120

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N LT +P     L  L+ L L+DNQL S+PA I  +  L+ L L NN+L ++  EI  
Sbjct: 121 NDNKLTSVPAAIWQLTSLKVLYLNDNQLTSVPADIGQVTSLRELYLWNNQLTSVRAEIGR 180

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEI 264
              L+     L L+ N+L ++P EI
Sbjct: 181 FTSLT----LLYLNGNQLASVPEEI 201



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 61/163 (37%), Positives = 88/163 (53%), Gaps = 3/163 (1%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           ++ +L L  N L   P    +  +L  L L +N++  +P AI +   L  L   +N LT 
Sbjct: 68  SLKSLWLERNRLMSLPAEIGQLASLEKLYLGDNQLKSVPAAIGHLTSLENLYLNDNKLT- 126

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            S+P  +  L +LKV  L+ NQL   P  I  + +L+ LYL NN L  V  EI +   L 
Sbjct: 127 -SVPAAIWQLTSLKVLYLNDNQLTSVPADIGQVTSLRELYLWNNQLTSVRAEIGRFTSLT 185

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           +L L GN L  +P+  G L  L  L+L+DNQL SLPA+I +L+
Sbjct: 186 LLYLNGNQLASVPEEIGRLTSLSRLLLNDNQLTSLPAAIRDLR 228



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/187 (34%), Positives = 96/187 (51%), Gaps = 3/187 (1%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           +++ L L  N L+  P    + T+L+SL L  NR+  LP  I     L  L   +N L  
Sbjct: 45  SLERLELDDNKLTSLPAEIGQLTSLKSLWLERNRLMSLPAEIGQLASLEKLYLGDNQL-- 102

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           +S+P  + +L +L+   L+ N+L   P  I  + +LK LYL +N L  VP +I ++  L 
Sbjct: 103 KSVPAAIGHLTSLENLYLNDNKLTSVPAAIWQLTSLKVLYLNDNQLTSVPADIGQVTSLR 162

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +    G    L  L L+ NQL S+P  I  L  L  LLL++N+L +LP 
Sbjct: 163 ELYLWNNQLTSVRAEIGRFTSLTLLYLNGNQLASVPEEIGRLTSLSRLLLNDNQLTSLPA 222

Query: 236 EIITLKC 242
            I  L+ 
Sbjct: 223 AIRDLRA 229



 Score = 53.1 bits (126), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 47/82 (57%), Gaps = 4/82 (4%)

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRT 259
           L+  DNQL S+PA I  L  L+ L L +NKL T+P  I  L  L E+L+   L +NKL +
Sbjct: 3   LVFCDNQLTSVPAEIGKLTSLERLDLRSNKLTTVPAAIWQLTSL-ERLE---LDDNKLTS 58

Query: 260 LPTEIITLKCLSELSLRDNPLV 281
           LP EI  L  L  L L  N L+
Sbjct: 59  LPAEIGQLTSLKSLWLERNRLM 80


>gi|386766577|ref|NP_001247321.1| scribbled, isoform Q [Drosophila melanogaster]
 gi|383292970|gb|AFH06638.1| scribbled, isoform Q [Drosophila melanogaster]
          Length = 2577

 Score =  109 bits (273), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 85/251 (33%), Positives = 127/251 (50%), Gaps = 15/251 (5%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           +++L L  N L   P+  S+ T L+ LDL +N I  LP  +   P L  L   +N L  +
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQL--Q 211

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            LP ++  L  L   ++S N+LE+ P +I  + +L  L L  N L  +P  I KL +L +
Sbjct: 212 RLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTI 271

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L  + DT G+   ++ LIL++N L  LPASI  +  L +L +  N L  LP E
Sbjct: 272 LKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLE 331

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
           I   +C +  L  L L +NKL+ LP E+     L  L +  N L+        Y P SL+
Sbjct: 332 I--GQCAN--LGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLL--------YLPYSLV 379

Query: 297 ELASRTLKVHE 307
            L  + + + E
Sbjct: 380 NLQLKAVWLSE 390



 Score =  106 bits (265), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 75/225 (33%), Positives = 115/225 (51%), Gaps = 9/225 (4%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTA 115
           ++ L L  N++   P N  +   LR L LS+N I  LP  I NF   +   ++RN++   
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDI--- 95

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P D+ +L++L+V + S N + + P     +  L  L L + SL  +P +   L +L 
Sbjct: 96  PDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLE 155

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L  +P+T   L +L+ L L DN++E LP  +  L  L  L L +N+L+ LP 
Sbjct: 156 SLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPP 215

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           E+  L     KL  L +  N+L  LP EI  L  L++L L  N L
Sbjct: 216 ELGLLT----KLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLL 256



 Score =  102 bits (253), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 83/241 (34%), Positives = 108/241 (44%), Gaps = 7/241 (2%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A  I  LP N +  +   +  L L  N +   P +   F NL  LD+S N I  +P  I 
Sbjct: 46  ANHIRDLPKNFF--RLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIK 103

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
           +   S  +A  +      LP   S LKNL V  L+   L   P     +  L+ L L  N
Sbjct: 104 HLQ-SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELREN 162

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L H+P  I++L KL  L LG N + D+P   G L  L  L L  NQL+ LP  +  L  
Sbjct: 163 LLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTK 222

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L  L +  N+L  LP EI  L  L++    L L  N L  LP  I  L  L+ L L  N 
Sbjct: 223 LTYLDVSENRLEELPNEISGLVSLTD----LDLAQNLLEALPDGIAKLSRLTILKLDQNR 278

Query: 280 L 280
           L
Sbjct: 279 L 279



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 90/199 (45%), Gaps = 27/199 (13%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L HN L   P      T L  LD+S NR+  LP  I+    L+ L    NLL  E+LP
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLL--EALP 260

Query: 120 KDMSNLKNLKVFNLSGNQLE-----------------------QFPIQILDIPTLKYLYL 156
             ++ L  L +  L  N+L+                       + P  I  +  L  L +
Sbjct: 261 DGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNV 320

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
             N+L ++P EI +   L VLSL  N L  +P   G+   L  L +S NQL  LP S+ N
Sbjct: 321 DRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVN 380

Query: 217 LKMLKSLLLHNNKLRTLPT 235
           L+ LK++ L  N+ + L T
Sbjct: 381 LQ-LKAVWLSENQSQPLLT 398



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 4/155 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           ++  L L  N L   PD  +K + L  L L  NR+  L   + N   +  LI   N L+ 
Sbjct: 245 SLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLS- 303

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP  +  +  L   N+  N LE  P++I     L  L L +N L  +P E+     LH
Sbjct: 304 -ELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLH 362

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           VL + GN L  +P +  +L QL+A+ LS+NQ + L
Sbjct: 363 VLDVSGNQLLYLPYSLVNL-QLKAVWLSENQSQPL 396



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 4/155 (2%)

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           + L+   L  N +   P     +  L+ L L +N +  +P +I     L  L +  N + 
Sbjct: 37  RTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIP 96

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           DIPD    L  L+    S N +  LP+  S LK L  L L++  L TLP +  +L     
Sbjct: 97  DIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLT---- 152

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +L+SL L  N L+ LP  I  L  L  L L DN +
Sbjct: 153 QLESLELRENLLKHLPETISQLTKLKRLDLGDNEI 187



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 4/112 (3%)

Query: 49  NDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLI 107
           ND     EN+  L+L  N LS  P +  + T L +L++  N + +LP  I     L  L 
Sbjct: 283 NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLS 342

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
            R+N L  + LP ++ N   L V ++SGNQL   P  ++++  LK ++L  N
Sbjct: 343 LRDNKL--KKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSEN 391


>gi|281362651|ref|NP_001163745.1| scribbled, isoform J [Drosophila melanogaster]
 gi|272477194|gb|ACZ95039.1| scribbled, isoform J [Drosophila melanogaster]
          Length = 2426

 Score =  109 bits (273), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 85/251 (33%), Positives = 127/251 (50%), Gaps = 15/251 (5%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           +++L L  N L   P+  S+ T L+ LDL +N I  LP  +   P L  L   +N L  +
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQL--Q 211

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            LP ++  L  L   ++S N+LE+ P +I  + +L  L L  N L  +P  I KL +L +
Sbjct: 212 RLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTI 271

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L  + DT G+   ++ LIL++N L  LPASI  +  L +L +  N L  LP E
Sbjct: 272 LKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLE 331

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
           I   +C +  L  L L +NKL+ LP E+     L  L +  N L+        Y P SL+
Sbjct: 332 I--GQCAN--LGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLL--------YLPYSLV 379

Query: 297 ELASRTLKVHE 307
            L  + + + E
Sbjct: 380 NLQLKAVWLSE 390



 Score =  106 bits (265), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 75/225 (33%), Positives = 115/225 (51%), Gaps = 9/225 (4%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTA 115
           ++ L L  N++   P N  +   LR L LS+N I  LP  I NF   +   ++RN++   
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDI--- 95

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P D+ +L++L+V + S N + + P     +  L  L L + SL  +P +   L +L 
Sbjct: 96  PDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLE 155

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L  +P+T   L +L+ L L DN++E LP  +  L  L  L L +N+L+ LP 
Sbjct: 156 SLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPP 215

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           E+  L     KL  L +  N+L  LP EI  L  L++L L  N L
Sbjct: 216 ELGLLT----KLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLL 256



 Score =  102 bits (253), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 83/241 (34%), Positives = 108/241 (44%), Gaps = 7/241 (2%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A  I  LP N +  +   +  L L  N +   P +   F NL  LD+S N I  +P  I 
Sbjct: 46  ANHIRDLPKNFF--RLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIK 103

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
           +   S  +A  +      LP   S LKNL V  L+   L   P     +  L+ L L  N
Sbjct: 104 HLQ-SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELREN 162

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L H+P  I++L KL  L LG N + D+P   G L  L  L L  NQL+ LP  +  L  
Sbjct: 163 LLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTK 222

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L  L +  N+L  LP EI  L  L++    L L  N L  LP  I  L  L+ L L  N 
Sbjct: 223 LTYLDVSENRLEELPNEISGLVSLTD----LDLAQNLLEALPDGIAKLSRLTILKLDQNR 278

Query: 280 L 280
           L
Sbjct: 279 L 279



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 90/199 (45%), Gaps = 27/199 (13%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L HN L   P      T L  LD+S NR+  LP  I+    L+ L    NLL  E+LP
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLL--EALP 260

Query: 120 KDMSNLKNLKVFNLSGNQLE-----------------------QFPIQILDIPTLKYLYL 156
             ++ L  L +  L  N+L+                       + P  I  +  L  L +
Sbjct: 261 DGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNV 320

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
             N+L ++P EI +   L VLSL  N L  +P   G+   L  L +S NQL  LP S+ N
Sbjct: 321 DRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVN 380

Query: 217 LKMLKSLLLHNNKLRTLPT 235
           L+ LK++ L  N+ + L T
Sbjct: 381 LQ-LKAVWLSENQSQPLLT 398



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 4/155 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           ++  L L  N L   PD  +K + L  L L  NR+  L   + N   +  LI   N L+ 
Sbjct: 245 SLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLS- 303

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP  +  +  L   N+  N LE  P++I     L  L L +N L  +P E+     LH
Sbjct: 304 -ELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLH 362

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           VL + GN L  +P +  +L QL+A+ LS+NQ + L
Sbjct: 363 VLDVSGNQLLYLPYSLVNL-QLKAVWLSENQSQPL 396



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 4/155 (2%)

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           + L+   L  N +   P     +  L+ L L +N +  +P +I     L  L +  N + 
Sbjct: 37  RTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIP 96

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           DIPD    L  L+    S N +  LP+  S LK L  L L++  L TLP +  +L     
Sbjct: 97  DIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLT---- 152

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +L+SL L  N L+ LP  I  L  L  L L DN +
Sbjct: 153 QLESLELRENLLKHLPETISQLTKLKRLDLGDNEI 187



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 4/112 (3%)

Query: 49  NDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLI 107
           ND     EN+  L+L  N LS  P +  + T L +L++  N + +LP  I     L  L 
Sbjct: 283 NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLS 342

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
            R+N L  + LP ++ N   L V ++SGNQL   P  ++++  LK ++L  N
Sbjct: 343 LRDNKL--KKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSEN 391


>gi|338212089|ref|YP_004656144.1| adenylate cyclase [Runella slithyformis DSM 19594]
 gi|336305910|gb|AEI49012.1| Adenylate cyclase [Runella slithyformis DSM 19594]
          Length = 983

 Score =  109 bits (273), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/211 (35%), Positives = 117/211 (55%), Gaps = 6/211 (2%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKV 130
            P    + T L +L L+ N++T LP       L  ++  NN L  + LPK ++  + L+ 
Sbjct: 351 LPKGLDQLTELETLHLAGNQLTQLPDLGRMTKLRMIVVNNNQL--KELPKGIAKAQKLRG 408

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            N + NQL + P  + +   L++++L NN L  +P + +KL KL  L++ GN LT++P  
Sbjct: 409 LNAANNQLSELPPGLFNASELEFVFLANNHLEKLPADFSKLQKLKDLNISGNQLTELPKN 468

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
            G    L+ L LS+N+L +LP SI  LK LKSL + +N L  LP  +    C  + L+ L
Sbjct: 469 IGSGGNLQNLQLSNNELTALPNSIGQLKRLKSLDVSHNPLTQLPESLSD--C--DSLERL 524

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +L N +L TLP  +  L+ L+ L+L D  +V
Sbjct: 525 VLSNCRLETLPNSLGKLQHLNFLNLADADMV 555



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 117/225 (52%), Gaps = 14/225 (6%)

Query: 66  NNLSFFPDNAS---KFTNLRSL---DLSNNRITHLPQA-ITNFPLSTLIARNNL--LTAE 116
            NL+  P +A+   +  NL+ L   DL  + +   P A + +F  ST +   +L  +  E
Sbjct: 290 QNLTLSPFSAAAKLELPNLKELFFSDLYEDSLRKKPIAGVPDFSASTQLKVLHLERVLGE 349

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           SLPK +  L  L+  +L+GNQL Q P  +  +  L+ + + NN L  +P+ I K  KL  
Sbjct: 350 SLPKGLDQLTELETLHLAGNQLTQLP-DLGRMTKLRMIVVNNNQLKELPKGIAKAQKLRG 408

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+   N L+++P    +  +LE + L++N LE LPA  S L+ LK L +  N+L  LP  
Sbjct: 409 LNAANNQLSELPPGLFNASELEFVFLANNHLEKLPADFSKLQKLKDLNISGNQLTELPKN 468

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I +       L++L L NN+L  LP  I  LK L  L +  NPL 
Sbjct: 469 IGS----GGNLQNLQLSNNELTALPNSIGQLKRLKSLDVSHNPLT 509



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 73/220 (33%), Positives = 113/220 (51%), Gaps = 9/220 (4%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           +++ +N L   P   +K   LR L+ +NN+++ LP  + N   L  +   NN L  E LP
Sbjct: 386 IVVNNNQLKELPKGIAKAQKLRGLNAANNQLSELPPGLFNASELEFVFLANNHL--EKLP 443

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            D S L+ LK  N+SGNQL + P  I     L+ L L NN L  +P  I +L +L  L +
Sbjct: 444 ADFSKLQKLKDLNISGNQLTELPKNIGSGGNLQNLQLSNNELTALPNSIGQLKRLKSLDV 503

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N LT +P++  D   LE L+LS+ +LE+LP S+  L+ L  L L +  +       + 
Sbjct: 504 SHNPLTQLPESLSDCDSLERLVLSNCRLETLPNSLGKLQHLNFLNLADADMV-----YVN 558

Query: 240 LKCLSEKLKSLLLHN-NKLRTLPTEIITLKCLSELSLRDN 278
              +  +++ L   N N+LR+LP  +   + L  L L  N
Sbjct: 559 RTSMEGRVEQLPAKNHNQLRSLPASLAHCRKLVNLELSRN 598



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 113/275 (41%), Gaps = 59/275 (21%)

Query: 40  ATQIEL--LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRI 91
           A+++E   L NN   K P +   L       +  N L+  P N     NL++L LSNN +
Sbjct: 426 ASELEFVFLANNHLEKLPADFSKLQKLKDLNISGNQLTELPKNIGSGGNLQNLQLSNNEL 485

Query: 92  THLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
           T LP +I                          LK LK  ++S N L Q P  + D  +L
Sbjct: 486 TALPNSI------------------------GQLKRLKSLDVSHNPLTQLPESLSDCDSL 521

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTF--GDLYQLEALILSDNQLES 209
           + L L N  L  +P  + KL  L+ L+L    +  +  T   G + QL A   + NQL S
Sbjct: 522 ERLVLSNCRLETLPNSLGKLQHLNFLNLADADMVYVNRTSMEGRVEQLPA--KNHNQLRS 579

Query: 210 LPASISNLKMLKSLLLHNNKLRT------------LPTEIITLK-----------CLSEK 246
           LPAS+++ + L +L L  NK               +P   + L             L  +
Sbjct: 580 LPASLAHCRKLVNLELSRNKYWEEKDLWPVIQQLRIPQGTVNLAECNLSAVPMTGWLDTQ 639

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +++L L  N+L   PTE    K +  + L  N L 
Sbjct: 640 IQNLYLVKNELTQFPTEWYKAKGIKSIVLFQNKLT 674


>gi|281362657|ref|NP_001163747.1| scribbled, isoform M [Drosophila melanogaster]
 gi|272477197|gb|ACZ95041.1| scribbled, isoform M [Drosophila melanogaster]
          Length = 2490

 Score =  109 bits (273), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 85/251 (33%), Positives = 127/251 (50%), Gaps = 15/251 (5%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           +++L L  N L   P+  S+ T L+ LDL +N I  LP  +   P L  L   +N L  +
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQL--Q 211

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            LP ++  L  L   ++S N+LE+ P +I  + +L  L L  N L  +P  I KL +L +
Sbjct: 212 RLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTI 271

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L  + DT G+   ++ LIL++N L  LPASI  +  L +L +  N L  LP E
Sbjct: 272 LKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLE 331

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
           I   +C +  L  L L +NKL+ LP E+     L  L +  N L+        Y P SL+
Sbjct: 332 I--GQCAN--LGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLL--------YLPYSLV 379

Query: 297 ELASRTLKVHE 307
            L  + + + E
Sbjct: 380 NLQLKAVWLSE 390



 Score =  106 bits (265), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 75/225 (33%), Positives = 115/225 (51%), Gaps = 9/225 (4%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTA 115
           ++ L L  N++   P N  +   LR L LS+N I  LP  I NF   +   ++RN++   
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDI--- 95

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P D+ +L++L+V + S N + + P     +  L  L L + SL  +P +   L +L 
Sbjct: 96  PDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLE 155

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L  +P+T   L +L+ L L DN++E LP  +  L  L  L L +N+L+ LP 
Sbjct: 156 SLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPP 215

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           E+  L     KL  L +  N+L  LP EI  L  L++L L  N L
Sbjct: 216 ELGLLT----KLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLL 256



 Score =  102 bits (253), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 83/241 (34%), Positives = 108/241 (44%), Gaps = 7/241 (2%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A  I  LP N +  +   +  L L  N +   P +   F NL  LD+S N I  +P  I 
Sbjct: 46  ANHIRDLPKNFF--RLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIK 103

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
           +   S  +A  +      LP   S LKNL V  L+   L   P     +  L+ L L  N
Sbjct: 104 HLQ-SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELREN 162

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L H+P  I++L KL  L LG N + D+P   G L  L  L L  NQL+ LP  +  L  
Sbjct: 163 LLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTK 222

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L  L +  N+L  LP EI  L  L++    L L  N L  LP  I  L  L+ L L  N 
Sbjct: 223 LTYLDVSENRLEELPNEISGLVSLTD----LDLAQNLLEALPDGIAKLSRLTILKLDQNR 278

Query: 280 L 280
           L
Sbjct: 279 L 279



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 90/199 (45%), Gaps = 27/199 (13%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L HN L   P      T L  LD+S NR+  LP  I+    L+ L    NLL  E+LP
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLL--EALP 260

Query: 120 KDMSNLKNLKVFNLSGNQLE-----------------------QFPIQILDIPTLKYLYL 156
             ++ L  L +  L  N+L+                       + P  I  +  L  L +
Sbjct: 261 DGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNV 320

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
             N+L ++P EI +   L VLSL  N L  +P   G+   L  L +S NQL  LP S+ N
Sbjct: 321 DRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVN 380

Query: 217 LKMLKSLLLHNNKLRTLPT 235
           L+ LK++ L  N+ + L T
Sbjct: 381 LQ-LKAVWLSENQSQPLLT 398



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 4/155 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           ++  L L  N L   PD  +K + L  L L  NR+  L   + N   +  LI   N L+ 
Sbjct: 245 SLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLS- 303

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP  +  +  L   N+  N LE  P++I     L  L L +N L  +P E+     LH
Sbjct: 304 -ELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLH 362

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           VL + GN L  +P +  +L QL+A+ LS+NQ + L
Sbjct: 363 VLDVSGNQLLYLPYSLVNL-QLKAVWLSENQSQPL 396



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 4/155 (2%)

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           + L+   L  N +   P     +  L+ L L +N +  +P +I     L  L +  N + 
Sbjct: 37  RTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIP 96

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           DIPD    L  L+    S N +  LP+  S LK L  L L++  L TLP +  +L     
Sbjct: 97  DIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLT---- 152

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +L+SL L  N L+ LP  I  L  L  L L DN +
Sbjct: 153 QLESLELRENLLKHLPETISQLTKLKRLDLGDNEI 187



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Composition-based stats.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 4/112 (3%)

Query: 49  NDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLI 107
           ND     EN+  L+L  N LS  P +  + T L +L++  N + +LP  I     L  L 
Sbjct: 283 NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLS 342

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
            R+N L  + LP ++ N   L V ++SGNQL   P  ++++  LK ++L  N
Sbjct: 343 LRDNKL--KKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSEN 391


>gi|255089471|ref|XP_002506657.1| predicted protein [Micromonas sp. RCC299]
 gi|226521930|gb|ACO67915.1| predicted protein [Micromonas sp. RCC299]
          Length = 205

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/199 (36%), Positives = 97/199 (48%), Gaps = 28/199 (14%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKV 130
            P    + T LR L+L +N +T                        S+P ++  L +L  
Sbjct: 20  VPAEVGRLTALRDLNLQHNELT------------------------SVPAEIGQLTSLTS 55

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
             L+ NQL   P +I  + +L+ LYL +N L  VP EI +L  L  LSLGGN LT +P  
Sbjct: 56  LWLNNNQLTSVPAEIGQLTSLEGLYLWDNKLTSVPTEIGQLTSLTDLSLGGNQLTSVPAE 115

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
            G L  L  L L DNQL SLPA I  L  L +L L +N+L  +P EI  L      L  L
Sbjct: 116 IGQLTSLRELELYDNQLTSLPAEIGQLTSLTALFLDDNRLTRVPAEIGQLA----SLVGL 171

Query: 251 LLHNNKLRTLPTEIITLKC 269
            L +NKL ++P EI  L+ 
Sbjct: 172 DLQHNKLTSVPAEIAQLRA 190



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/164 (39%), Positives = 88/164 (53%), Gaps = 4/164 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++P ++  L  L+  NL  N+L   P +I  + +L  L+L NN L  VP EI +L  L  
Sbjct: 19  AVPAEVGRLTALRDLNLQHNELTSVPAEIGQLTSLTSLWLNNNQLTSVPAEIGQLTSLEG 78

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N LT +P   G L  L  L L  NQL S+PA I  L  L+ L L++N+L +LP E
Sbjct: 79  LYLWDNKLTSVPTEIGQLTSLTDLSLGGNQLTSVPAEIGQLTSLRELELYDNQLTSLPAE 138

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L  L+    +L L +N+L  +P EI  L  L  L L+ N L
Sbjct: 139 IGQLTSLT----ALFLDDNRLTRVPAEIGQLASLVGLDLQHNKL 178



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/180 (35%), Positives = 86/180 (47%), Gaps = 24/180 (13%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM 122
           L HN L+  P    + T+L SL L+NN++T                        S+P ++
Sbjct: 35  LQHNELTSVPAEIGQLTSLTSLWLNNNQLT------------------------SVPAEI 70

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             L +L+   L  N+L   P +I  + +L  L LG N L  VP EI +L  L  L L  N
Sbjct: 71  GQLTSLEGLYLWDNKLTSVPTEIGQLTSLTDLSLGGNQLTSVPAEIGQLTSLRELELYDN 130

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            LT +P   G L  L AL L DN+L  +PA I  L  L  L L +NKL ++P EI  L+ 
Sbjct: 131 QLTSLPAEIGQLTSLTALFLDDNRLTRVPAEIGQLASLVGLDLQHNKLTSVPAEIAQLRA 190


>gi|71896833|ref|NP_001026466.1| leucine-rich repeat-containing protein 40 [Gallus gallus]
 gi|82233906|sp|Q5ZLN0.1|LRC40_CHICK RecName: Full=Leucine-rich repeat-containing protein 40
 gi|53129131|emb|CAG31363.1| hypothetical protein RCJMB04_5h5 [Gallus gallus]
          Length = 603

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 86/228 (37%), Positives = 128/228 (56%), Gaps = 9/228 (3%)

Query: 57  NIDTLLLYHNNLSF-FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           N+DT    H NLSF   D   + T+L  L L++N++  L + +   P L+ L   +N LT
Sbjct: 59  NLDTPEEAHQNLSFGAADRWWEQTDLTKLILASNQLRCLSEDVRLLPALTVLDVHDNQLT 118

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLP  +  L+NL+  ++S N+L+  P ++L +  LK L L +N L+H+P    +L  L
Sbjct: 119 --SLPSALGQLENLQKLDVSHNKLKSIPEELLQLSHLKGLLLQHNELSHLPDGFGQLVSL 176

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LTDIP +F  L  L  L L+ NQL+ LPA IS +K L+ L    N L ++P
Sbjct: 177 EELDLSNNHLTDIPKSFALLINLVRLNLACNQLKDLPADISAMKSLRQLDCTKNYLESVP 236

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           +E+ ++  L +    L L  NKLR+LP E+ + K L EL   +N + I
Sbjct: 237 SELASMASLEQ----LYLRKNKLRSLP-ELPSCKLLKELHAGENQIEI 279



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 113/227 (49%), Gaps = 9/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           EN+  L + HN L   P+   + ++L+ L L +N ++HLP        L  L   NN LT
Sbjct: 128 ENLQKLDVSHNKLKSIPEELLQLSHLKGLLLQHNELSHLPDGFGQLVSLEELDLSNNHLT 187

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +PK  + L NL   NL+ NQL+  P  I  + +L+ L    N L  VP E+  +  L
Sbjct: 188 --DIPKSFALLINLVRLNLACNQLKDLPADISAMKSLRQLDCTKNYLESVPSELASMASL 245

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS-ISNLKMLKSLLLHNNKLRTL 233
             L L  N L  +P+       L+ L   +NQ+E L A  + +L  L  L L +NK++++
Sbjct: 246 EQLYLRKNKLRSLPE-LPSCKLLKELHAGENQIEILNAENLKHLNSLSVLELRDNKIKSV 304

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P EI  L    +KL+ L L NN +  LP  +  L  L  L+L  NPL
Sbjct: 305 PDEITLL----QKLERLDLANNDISRLPYTLGNLSQLKFLALEGNPL 347



 Score = 64.7 bits (156), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 12/199 (6%)

Query: 74  NASKFTNLRSLDLSNNRITHLP----QAITNFPLSTLIARNNLLTAESLPKDMSNLKN-L 128
           N    T L+ LD S  ++  +P     A+ + P++++    N LTA  +P  +  LK+ +
Sbjct: 395 NMHAITTLKLLDYSEKQVAVIPDDVFSAVRSNPVTSVNFSKNQLTA--IPPRIVELKDSV 452

Query: 129 KVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
              N   N++    +++  +  L +L + NN L  +P E+  L +L V++L  N     P
Sbjct: 453 CDVNFGFNKISSVSLELCTLHKLTHLDIRNNVLTSLPEEMEALTRLQVINLSFNRFKVFP 512

Query: 189 DTFGDLYQLEALILSDNQLESL-PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
                +  LE ++LS+NQ+ S+ P  +  ++ L +L L NN L  +P E+    C  E L
Sbjct: 513 SVLYRMLALETILLSNNQVGSIDPLQLKKMEQLGTLDLQNNDLLQVPPELGN--C--ETL 568

Query: 248 KSLLLHNNKLRTLPTEIIT 266
           ++LLL  N  RT    I+ 
Sbjct: 569 RTLLLEGNPFRTPRAAILA 587



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 60/125 (48%), Gaps = 7/125 (5%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNN---LLTAESLPKDM 122
           N L   P   +   +L  L L  N++  LP+  +   L  L A  N   +L AE+L    
Sbjct: 230 NYLESVPSELASMASLEQLYLRKNKLRSLPELPSCKLLKELHAGENQIEILNAENL---- 285

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
            +L +L V  L  N+++  P +I  +  L+ L L NN ++ +P  +  L +L  L+L GN
Sbjct: 286 KHLNSLSVLELRDNKIKSVPDEITLLQKLERLDLANNDISRLPYTLGNLSQLKFLALEGN 345

Query: 183 SLTDI 187
            L  I
Sbjct: 346 PLRTI 350


>gi|417782158|ref|ZP_12429891.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410777751|gb|EKR62396.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 447

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 127/226 (56%), Gaps = 9/226 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L+  P    K  NL+ L+L+ N++T LP+ I     L  L    N LT  +LPK++  
Sbjct: 61  NELTVLPKEIGKLQNLQELNLNYNKLTTLPEEIGQLQNLQILHLCENQLT--TLPKEIGQ 118

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ L++ +L+ N+L   P +I  +  L+ L L    L+ +P+EI KL KL VLSL  N  
Sbjct: 119 LQRLQILHLAHNKLTTLPEEIGQLQNLQELNLNGWQLSTLPKEIGKLQKLQVLSLDLNER 178

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T +P   G L  L+ L L  NQL +LP  I +L+ L+ L L++N+L TLP EI  L+   
Sbjct: 179 TTLPKEIGQLQNLQILYLRANQLTNLPKEIIHLQKLQELNLNHNQLITLPKEIGKLR--- 235

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL--VIRFVSDM 288
             LK L L +N+L  +P EI  L+ L +L+L  N L  + + + D+
Sbjct: 236 -NLKILNLEDNQLMIIPKEIEQLENLQKLNLGRNQLTTLTKGIGDL 280



 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/265 (36%), Positives = 137/265 (51%), Gaps = 7/265 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P        L+ L+L++N++  LP+ I     L  L   +N L 
Sbjct: 189 QNLQILYLRANQLTNLPKEIIHLQKLQELNLNHNQLITLPKEIGKLRNLKILNLEDNQLM 248

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +PK++  L+NL+  NL  NQL      I D+  LK L+L  N L  +P+EI KL  L
Sbjct: 249 I--IPKEIEQLENLQKLNLGRNQLTTLTKGIGDLQNLKELHLEINQLTTLPKEIGKLQNL 306

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L+L  N LT + +  G L  L+ L L  NQL +LP  I  L+ LK L L+NN+L TLP
Sbjct: 307 KILNLCNNELTTLSNGIGRLQNLQKLDLRFNQLTTLPKEIGKLQNLKVLDLYNNQLTTLP 366

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPS 294
            +I  L    + LK L L  N+L TLP EI  L+ L +L+L  N L I        K  +
Sbjct: 367 KKIGKL----QNLKVLDLDYNQLTTLPKEIGQLQNLRQLNLNHNQLTILPKDIEQLKKLN 422

Query: 295 LLELASRTLKVHEIDYSQEHLPQNL 319
            L L +  +   EI   Q+ LP+ +
Sbjct: 423 TLSLRNNPIASKEIKRIQKLLPKQM 447



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 91/272 (33%), Positives = 140/272 (51%), Gaps = 22/272 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           + +  L L HN L+  P+   +  NL+ L+L+  +++ LP+ I       +++ + L   
Sbjct: 120 QRLQILHLAHNKLTTLPEEIGQLQNLQELNLNGWQLSTLPKEIGKLQKLQVLSLD-LNER 178

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LPK++  L+NL++  L  NQL   P +I+ +  L+ L L +N L  +P+EI KL  L 
Sbjct: 179 TTLPKEIGQLQNLQILYLRANQLTNLPKEIIHLQKLQELNLNHNQLITLPKEIGKLRNLK 238

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L+L  N L  IP     L  L+ L L  NQL +L   I +L+ LK L L  N+L TLP 
Sbjct: 239 ILNLEDNQLMIIPKEIEQLENLQKLNLGRNQLTTLTKGIGDLQNLKELHLEINQLTTLPK 298

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI------------- 282
           EI  L    + LK L L NN+L TL   I  L+ L +L LR N L               
Sbjct: 299 EIGKL----QNLKILNLCNNELTTLSNGIGRLQNLQKLDLRFNQLTTLPKEIGKLQNLKV 354

Query: 283 --RFVSDMTYKPPSLLELASRTLKVHEIDYSQ 312
              + + +T  P  + +L +  LKV ++DY+Q
Sbjct: 355 LDLYNNQLTTLPKKIGKLQN--LKVLDLDYNQ 384



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 98/173 (56%), Gaps = 4/173 (2%)

Query: 109 RNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREI 168
           RNN      LPK++  L+NL+  NL+ N+L   P +I  +  L+ L+L  N L  +P+EI
Sbjct: 57  RNNDNELTVLPKEIGKLQNLQELNLNYNKLTTLPEEIGQLQNLQILHLCENQLTTLPKEI 116

Query: 169 NKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
            +L +L +L L  N LT +P+  G L  L+ L L+  QL +LP  I  L+ L+ L L  N
Sbjct: 117 GQLQRLQILHLAHNKLTTLPEEIGQLQNLQELNLNGWQLSTLPKEIGKLQKLQVLSLDLN 176

Query: 229 KLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +  TLP EI  L    + L+ L L  N+L  LP EII L+ L EL+L  N L+
Sbjct: 177 ERTTLPKEIGQL----QNLQILYLRANQLTNLPKEIIHLQKLQELNLNHNQLI 225



 Score = 38.5 bits (88), Expect = 6.3,   Method: Compositional matrix adjust.
 Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 8/77 (10%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K +N+  L L +N L+  P    +  NLR L+L++N++T LP+ I     L+TL  RNN 
Sbjct: 371 KLQNLKVLDLDYNQLTTLPKEIGQLQNLRQLNLNHNQLTILPKDIEQLKKLNTLSLRNNP 430

Query: 113 LTAES-------LPKDM 122
           + ++        LPK M
Sbjct: 431 IASKEIKRIQKLLPKQM 447


>gi|363731180|ref|XP_427026.3| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog [Gallus
           gallus]
          Length = 1894

 Score =  109 bits (272), Expect = 2e-21,   Method: Composition-based stats.
 Identities = 88/263 (33%), Positives = 125/263 (47%), Gaps = 33/263 (12%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF- 101
           ++ +P   Y +   +++ LLL  N L   P    +  NLR L LS+N I  LP  + NF 
Sbjct: 25  LQAVPEEIY-RYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 83

Query: 102 PLSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
            L  L I+RN++     +P+ +   K+L++ + SGN L + P     + +L +L L + S
Sbjct: 84  QLVELDISRNDI---PEIPESIKFCKSLEIADFSGNPLSRLPEGFTQLRSLGHLALNDVS 140

Query: 161 LNHVPREINKLC-----------------------KLHVLSLGGNSLTDIPDTFGDLYQL 197
           L  +P +I  L                        KL  L LGGN L  +PDT G L  L
Sbjct: 141 LQSLPNDIGNLANLVTLELRENLLKTLPTSLSFLVKLEQLDLGGNDLEVLPDTLGALPNL 200

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
             L L  NQL +LP  + NL+ L  L +  NKL  LP E+  L  L++    LLL  N L
Sbjct: 201 RELWLDRNQLSALPPELGNLRRLVCLDVSENKLEQLPNEVSGLVALTD----LLLSQNLL 256

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
             +P  I  LK LS L +  N L
Sbjct: 257 ECIPDGIGQLKQLSILKVDQNRL 279



 Score =  108 bits (269), Expect = 6e-21,   Method: Composition-based stats.
 Identities = 81/239 (33%), Positives = 119/239 (49%), Gaps = 9/239 (3%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP 102
           ++ LPN+  N    N+ TL L  N L   P + S    L  LDL  N +  LP  +   P
Sbjct: 141 LQSLPNDIGNLA--NLVTLELRENLLKTLPTSLSFLVKLEQLDLGGNDLEVLPDTLGALP 198

Query: 103 -LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L  L    N L+A  LP ++ NL+ L   ++S N+LEQ P ++  +  L  L L  N L
Sbjct: 199 NLRELWLDRNQLSA--LPPELGNLRRLVCLDVSENKLEQLPNEVSGLVALTDLLLSQNLL 256

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +P  I +L +L +L +  N LT++ ++ GD   L  LIL++N L +LP S+  L  L 
Sbjct: 257 ECIPDGIGQLKQLSILKVDQNRLTEVTESIGDCENLSELILTENMLTALPKSLGKLTKLT 316

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +L +  N+L +LP EI         L  L L +N+L  LP E+     L  L +  N L
Sbjct: 317 NLNVDRNRLTSLPAEIGG----CANLNVLSLRDNRLALLPAELANTTELHVLDVAGNRL 371



 Score =  102 bits (254), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 80/237 (33%), Positives = 115/237 (48%), Gaps = 22/237 (9%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N LS  P+  ++  +L  L L++  +  LP  I N   L TL  R NLL  ++LP  +S 
Sbjct: 116 NPLSRLPEGFTQLRSLGHLALNDVSLQSLPNDIGNLANLVTLELRENLL--KTLPTSLSF 173

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L  L+  +L GN LE  P  +  +P L+ L+L  N L+ +P E+  L +L  L +  N L
Sbjct: 174 LVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENKL 233

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
             +P+    L  L  L+LS N LE +P  I  LK L  L +  N+L  +   I   + LS
Sbjct: 234 EQLPNEVSGLVALTDLLLSQNLLECIPDGIGQLKQLSILKVDQNRLTEVTESIGDCENLS 293

Query: 245 E-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           E                   KL +L +  N+L +LP EI     L+ LSLRDN L +
Sbjct: 294 ELILTENMLTALPKSLGKLTKLTNLNVDRNRLTSLPAEIGGCANLNVLSLRDNRLAL 350



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Composition-based stats.
 Identities = 91/296 (30%), Positives = 129/296 (43%), Gaps = 47/296 (15%)

Query: 29  FSYSSLDSETL--ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           + YS    E L  A Q+  LP   +  +  N+  L L  N +   P   + F  L  LD+
Sbjct: 33  YRYSRSLEELLLDANQLRELPKPFF--RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDI 90

Query: 87  SNNRITHLPQAI-----------TNFPLSTL------------IARNNLLTAESLPKDMS 123
           S N I  +P++I           +  PLS L            +A N++ + +SLP D+ 
Sbjct: 91  SRNDIPEIPESIKFCKSLEIADFSGNPLSRLPEGFTQLRSLGHLALNDV-SLQSLPNDIG 149

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           NL NL    L  N L+  P  +  +  L+ L LG N L  +P  +  L  L  L L  N 
Sbjct: 150 NLANLVTLELRENLLKTLPTSLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQ 209

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           L+ +P   G+L +L  L +S+N+LE LP  +S L  L  LLL  N L  +P  I  LK L
Sbjct: 210 LSALPPELGNLRRLVCLDVSENKLEQLPNEVSGLVALTDLLLSQNLLECIPDGIGQLKQL 269

Query: 244 S-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           S                   E L  L+L  N L  LP  +  L  L+ L++  N L
Sbjct: 270 SILKVDQNRLTEVTESIGDCENLSELILTENMLTALPKSLGKLTKLTNLNVDRNRL 325



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Composition-based stats.
 Identities = 70/215 (32%), Positives = 101/215 (46%), Gaps = 10/215 (4%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF- 101
           +E+LP  D      N+  L L  N LS  P        L  LD+S N++  LP  ++   
Sbjct: 187 LEVLP--DTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENKLEQLPNEVSGLV 244

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L+ L+   NLL  E +P  +  LK L +  +  N+L +    I D   L  L L  N L
Sbjct: 245 ALTDLLLSQNLL--ECIPDGIGQLKQLSILKVDQNRLTEVTESIGDCENLSELILTENML 302

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +P+ + KL KL  L++  N LT +P   G    L  L L DN+L  LPA ++N   L 
Sbjct: 303 TALPKSLGKLTKLTNLNVDRNRLTSLPAEIGGCANLNVLSLRDNRLALLPAELANTTELH 362

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
            L +  N+L+ LP  +  L      LK+L L  N+
Sbjct: 363 VLDVAGNRLQNLPFALTNL-----NLKALWLAENQ 392



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 69/204 (33%), Positives = 100/204 (49%), Gaps = 10/204 (4%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ +LD  +  +  +P+ I  +   L  L+   N L    LPK    L NL+   LS N+
Sbjct: 14  HVEALDRRHCSLQAVPEEIYRYSRSLEELLLDANQL--RELPKPFFRLLNLRKLGLSDNE 71

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK-LHVLSLGGNSLTDIPDTFGDLYQ 196
           +++ P ++ +   L  L +  N +  +P  I K CK L +    GN L+ +P+ F  L  
Sbjct: 72  IQRLPPEVANFMQLVELDISRNDIPEIPESI-KFCKSLEIADFSGNPLSRLPEGFTQLRS 130

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
           L  L L+D  L+SLP  I NL  L +L L  N L+TLPT +  L     KL+ L L  N 
Sbjct: 131 LGHLALNDVSLQSLPNDIGNLANLVTLELRENLLKTLPTSLSFLV----KLEQLDLGGND 186

Query: 257 LRTLPTEIITLKCLSELSLRDNPL 280
           L  LP  +  L  L EL L  N L
Sbjct: 187 LEVLPDTLGALPNLRELWLDRNQL 210


>gi|301610186|ref|XP_002934640.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           LOC401387 homolog [Xenopus (Silurana) tropicalis]
          Length = 813

 Score =  109 bits (272), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 120/225 (53%), Gaps = 7/225 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAE 116
           I ++ L    L+  P +  + TNL+ L LSNN +THLP ++ +   L  L    N L   
Sbjct: 97  ITSINLNSKELTEIPPDVFRCTNLQCLLLSNNFMTHLPTSLCHLSKLEILSLEGNALV-- 154

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           SLP ++ +L  L   N++ NQ+   P +I  +  +K L+  NN L+ +P  +  L  L V
Sbjct: 155 SLPPEICSLSQLTALNVNHNQIAVLPHEISGLKNIKQLFANNNKLSQLPPCLGDLTTLQV 214

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L + GNS+  +PD+   L  L  L L  NQ+ +LP ++  L  L  L L  N++++LP E
Sbjct: 215 LCISGNSMKTLPDSTASLKNLHVLNLDGNQISALPKAVFRLSQLVKLCLSGNQIKSLPKE 274

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I  LK     L+ L L +N+L  LP ++  L  L EL+L DN L 
Sbjct: 275 IGDLK----NLRELSLSSNQLTFLPVQLYNLTSLEELTLDDNKLT 315



 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 141/263 (53%), Gaps = 19/263 (7%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI----ARNNLL 113
           +  L +  N++   PD+ +   NL  L+L  N+I+ LP+A+  F LS L+    + N + 
Sbjct: 212 LQVLCISGNSMKTLPDSTASLKNLHVLNLDGNQISALPKAV--FRLSQLVKLCLSGNQI- 268

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
             +SLPK++ +LKNL+  +LS NQL   P+Q+ ++ +L+ L L +N L  +  ++  L +
Sbjct: 269 --KSLPKEIGDLKNLRELSLSSNQLTFLPVQLYNLTSLEELTLDDNKLTAISDKLQNLKQ 326

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L VLS+  N LTDI +       +E L L+ NQ+  LP  I NL+ LK L +  N L  L
Sbjct: 327 LKVLSIANNLLTDITEKVCWCPAIECLKLNGNQMYRLPTKIHNLRNLKELHIERNALEML 386

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL--VIRFVSDMTYK 291
           P ++  L  LS     ++  NN L  +P E+     +++L L  N L  V + +S MT  
Sbjct: 387 PDQLAHLNNLS----VIVCANNNLLWIPIELKNCNQITKLDLSGNKLSEVPQALSSMT-- 440

Query: 292 PPSLLELASRTLKVHEIDYSQEH 314
             SLL L     ++HEI  S  H
Sbjct: 441 --SLLYLNLNQNEIHEIANSIIH 461



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 99/312 (31%), Positives = 146/312 (46%), Gaps = 36/312 (11%)

Query: 51  YNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN 110
           +N+K E+++   L  N L+ F  +     NL  LDLS N I  +P AI+N   S      
Sbjct: 461 HNRKLEHLE---LSGNKLTVFSVHFCGLHNLAYLDLSRNEINSVPSAISNL-ESLSELLL 516

Query: 111 NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
           +       P ++  LK+L+  +LSGNQ+E  P  I  +  L+Y+ L NNS    PRE+  
Sbjct: 517 HSNKFRRFPIELCALKSLQKIDLSGNQIETVPSGISLLEGLRYVNLSNNSFKVFPRELFS 576

Query: 171 LCKLHVLSLG---GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           +  L  L +    G  L  +PD    L  L+ L +SDN +++LP SI  +K L  L   +
Sbjct: 577 VSSLETLKISQKDGRKLISLPDELSKLKNLKELEISDNNIKTLPGSIGEMKNLVQLTATS 636

Query: 228 NKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSD 287
           N+L  LP  I +L  L +    L L  N+L +LP++I  L+ L E++L  NP++      
Sbjct: 637 NQLYHLPASISSLAALQQ----LSLKGNQLTSLPSDISGLQKLREINLDSNPML------ 686

Query: 288 MTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVF--FDNRIEH 345
              +PPSLL    R   +               +YL+SA        +  F    N I  
Sbjct: 687 ---RPPSLLCDGKRLYPIG--------------RYLQSADLRDEKILQKTFKLISNNIPA 729

Query: 346 IKFVDFCGKYRI 357
             F  FC K RI
Sbjct: 730 EDFSFFCKKLRI 741



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/236 (35%), Positives = 124/236 (52%), Gaps = 12/236 (5%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN-NLLTA 115
           N+  LLL +N ++  P +    + L  L L  N +  LP  I +  LS L A N N    
Sbjct: 119 NLQCLLLSNNFMTHLPTSLCHLSKLEILSLEGNALVSLPPEICS--LSQLTALNVNHNQI 176

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP ++S LKN+K    + N+L Q P  + D+ TL+ L +  NS+  +P     L  LH
Sbjct: 177 AVLPHEISGLKNIKQLFANNNKLSQLPPCLGDLTTLQVLCISGNSMKTLPDSTASLKNLH 236

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           VL+L GN ++ +P     L QL  L LS NQ++SLP  I +LK L+ L L +N+L  LP 
Sbjct: 237 VLNLDGNQISALPKAVFRLSQLVKLCLSGNQIKSLPKEIGDLKNLRELSLSSNQLTFLPV 296

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYK 291
           ++  L  L E    L L +NKL  +  ++  LK L  LS+ +N      ++D+T K
Sbjct: 297 QLYNLTSLEE----LTLDDNKLTAISDKLQNLKQLKVLSIANN-----LLTDITEK 343



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 120/237 (50%), Gaps = 6/237 (2%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP 102
           +E+LP  D      N+  ++  +NNL + P        +  LDLS N+++ +PQA+++  
Sbjct: 383 LEMLP--DQLAHLNNLSVIVCANNNLLWIPIELKNCNQITKLDLSGNKLSEVPQALSS-- 438

Query: 103 LSTLIARN-NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
           +++L+  N N      +   + + + L+   LSGN+L  F +    +  L YL L  N +
Sbjct: 439 MTSLLYLNLNQNEIHEIANSIIHNRKLEHLELSGNKLTVFSVHFCGLHNLAYLDLSRNEI 498

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
           N VP  I+ L  L  L L  N     P     L  L+ + LS NQ+E++P+ IS L+ L+
Sbjct: 499 NSVPSAISNLESLSELLLHSNKFRRFPIELCALKSLQKIDLSGNQIETVPSGISLLEGLR 558

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            + L NN  +  P E+ ++  L E LK       KL +LP E+  LK L EL + DN
Sbjct: 559 YVNLSNNSFKVFPRELFSVSSL-ETLKISQKDGRKLISLPDELSKLKNLKELEISDN 614



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/173 (35%), Positives = 92/173 (53%), Gaps = 11/173 (6%)

Query: 111 NLLTAES--LPKDM-SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE 167
           NL+ ++S  +P+ + S   ++   NL+  +L + P  +     L+ L L NN + H+P  
Sbjct: 77  NLVPSDSNNMPRTVPSGTGSITSINLNSKELTEIPPDVFRCTNLQCLLLSNNFMTHLPTS 136

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           +  L KL +LSL GN+L  +P     L QL AL ++ NQ+  LP  IS LK +K L  +N
Sbjct: 137 LCHLSKLEILSLEGNALVSLPPEICSLSQLTALNVNHNQIAVLPHEISGLKNIKQLFANN 196

Query: 228 NKLRTLPTEIITLKCLSE--KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           NKL  LP       CL +   L+ L +  N ++TLP    +LK L  L+L  N
Sbjct: 197 NKLSQLPP------CLGDLTTLQVLCISGNSMKTLPDSTASLKNLHVLNLDGN 243



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLI-ARNNLLTA 115
           I+ L L  N +   P       NL+ L +  N +  LP  + +   LS ++ A NNLL  
Sbjct: 350 IECLKLNGNQMYRLPTKIHNLRNLKELHIERNALEMLPDQLAHLNNLSVIVCANNNLLW- 408

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P ++ N   +   +LSGN+L + P  +  + +L YL L  N ++ +   I    KL 
Sbjct: 409 --IPIELKNCNQITKLDLSGNKLSEVPQALSSMTSLLYLNLNQNEIHEIANSIIHNRKLE 466

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L GN LT     F  L+ L  L LS N++ S+P++ISNL+ L  LLLH+NK R  P 
Sbjct: 467 HLELSGNKLTVFSVHFCGLHNLAYLDLSRNEINSVPSAISNLESLSELLLHSNKFRRFPI 526

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           E+  LK     L+ + L  N++ T+P+ I  L+ L  ++L +N
Sbjct: 527 ELCALK----SLQKIDLSGNQIETVPSGISLLEGLRYVNLSNN 565



 Score = 45.1 bits (105), Expect = 0.060,   Method: Compositional matrix adjust.
 Identities = 41/133 (30%), Positives = 69/133 (51%), Gaps = 9/133 (6%)

Query: 29  FSYSSLDSETLATQ--IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           FS SSL++  ++ +   +L+   D   K +N+  L +  NN+   P +  +  NL  L  
Sbjct: 575 FSVSSLETLKISQKDGRKLISLPDELSKLKNLKELEISDNNIKTLPGSIGEMKNLVQLTA 634

Query: 87  SNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI 145
           ++N++ HLP +I++   L  L  + N LT  SLP D+S L+ L+  NL  N + + P  +
Sbjct: 635 TSNQLYHLPASISSLAALQQLSLKGNQLT--SLPSDISGLQKLREINLDSNPMLRPPSLL 692

Query: 146 LD----IPTLKYL 154
            D     P  +YL
Sbjct: 693 CDGKRLYPIGRYL 705


>gi|359726824|ref|ZP_09265520.1| leucine-rich repeat-containing protein [Leptospira weilii str.
           2006001855]
          Length = 348

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 87/247 (35%), Positives = 125/247 (50%), Gaps = 22/247 (8%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N++TL+L  N L   P+   +  NL +LDL  N++  LP  I     L  L    N 
Sbjct: 61  KLRNLETLILAENRLKTIPNEIEQLQNLATLDLYENKLKVLPNEIGKLENLKELNLSGNQ 120

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT   LP  +  L+NL++  L  NQL   P +I+ + +L+ L L  N +  +P+EI++L 
Sbjct: 121 LTV--LPPSIGQLQNLEILELFRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQLS 178

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L LG N +  +   F  L  L++L L DN+LE+ PA I  LK L+ L L+ N+ + 
Sbjct: 179 NLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKI 238

Query: 233 LPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           LP EI+ L+ L                    EKL+SL L  N+L TLP  I  L+ L  +
Sbjct: 239 LPEEILQLENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIEHLRSLKIV 298

Query: 274 SLRDNPL 280
            L  N L
Sbjct: 299 HLEQNRL 305



 Score =  108 bits (269), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 109/194 (56%), Gaps = 9/194 (4%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI----ARNN 111
           +N++ L L+ N L+  P+      +L+ L+L  N I  LP+ I+   LS LI     +N 
Sbjct: 132 QNLEILELFRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQ--LSNLIWLDLGKNK 189

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
           +   + L  D   L+NLK  NL  N+LE FP  I+ + +L++L L  N    +P EI +L
Sbjct: 190 I---KRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEILQL 246

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L VL L GN LT +P+  G L +LE+L L  N+L +LP  I +L+ LK + L  N+L 
Sbjct: 247 ENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIEHLRSLKIVHLEQNRLT 306

Query: 232 TLPTEIITLKCLSE 245
            +P EI +L+ L E
Sbjct: 307 AIPEEIGSLQNLKE 320



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 92/238 (38%), Positives = 123/238 (51%), Gaps = 25/238 (10%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
           HNNL     N S+   +R LD+S+  +  LP+ I  F  L  LI   N LTA  +PK++ 
Sbjct: 6   HNNLEKSLQNPSE---VRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTA--IPKEIG 60

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            L+NL+   L+ N+L+  P +I  +  L  L L  N L  +P EI KL  L  L+L GN 
Sbjct: 61  KLRNLETLILAENRLKTIPNEIEQLQNLATLDLYENKLKVLPNEIGKLENLKELNLSGNQ 120

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL--- 240
           LT +P + G L  LE L L  NQL +LP  I  LK L+ L L  N++++LP EI  L   
Sbjct: 121 LTVLPPSIGQLQNLEILELFRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNL 180

Query: 241 ----------KCLS------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
                     K LS      + LKSL L +NKL   P +I+ LK L  L+L  N   I
Sbjct: 181 IWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKI 238



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/166 (34%), Positives = 85/166 (51%), Gaps = 3/166 (1%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L+ N +   P   S+ +NL  LDL  N+I  L         L +L   +N L  E+ P D
Sbjct: 162 LFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKL--ENFPAD 219

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  LK+L+  NL+ N+ +  P +IL +  L+ L L  N L  +P  I +L KL  L L G
Sbjct: 220 IVQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPEGIGRLEKLESLFLEG 279

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           N LT +P     L  L+ + L  N+L ++P  I +L+ LK L L +
Sbjct: 280 NRLTTLPKGIEHLRSLKIVHLEQNRLTAIPEEIGSLQNLKELYLQD 325


>gi|417776852|ref|ZP_12424684.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410573348|gb|EKQ36398.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
          Length = 265

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/224 (34%), Positives = 118/224 (52%), Gaps = 28/224 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           ++  L+L    L+  P    +  NL+ LDL  N+                         +
Sbjct: 51  DVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQF------------------------K 86

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++PK +  LKNL++ +L  NQ +  P +I  +  L+ L L  N    VP++I +L  L V
Sbjct: 87  TVPKKIEQLKNLQMLDLCYNQFKTVPKKIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQV 146

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+L  N LT +P   G L  L+ L L  N+L++LP  I  LK L++L L+ N+L TLP E
Sbjct: 147 LNLSSNQLTTLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPRE 206

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L+ L+E    L L +N++ TLP EII L+ L +L+L +NP+
Sbjct: 207 IGRLQSLTE----LHLQHNQIATLPDEIIQLQNLRKLTLYENPI 246


>gi|455669294|gb|EMF34440.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 221

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 77/201 (38%), Positives = 106/201 (52%), Gaps = 4/201 (1%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ESLP+ +   +NL+  NL GNQL   P +I  +  L+ L L  N L  +P+EI +L  L 
Sbjct: 7   ESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLE 66

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L GN  T +P   G L +LEAL L  N+    P  I   + LK L L  ++L+TLP 
Sbjct: 67  RLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPK 126

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
           EI+ L    + L+SL L  N+L +LP EI  L+ L EL+L+DN L          +   +
Sbjct: 127 EILLL----QNLQSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQKLEV 182

Query: 296 LELASRTLKVHEIDYSQEHLP 316
           L L S +  + E    QE LP
Sbjct: 183 LRLYSNSFSLKEKQKIQELLP 203



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/216 (36%), Positives = 107/216 (49%), Gaps = 28/216 (12%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKN 127
           L   P     F NL  L+L  N++T                        SLPK++  L+N
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLT------------------------SLPKEIGQLQN 41

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           L+V NL+GNQL   P +I  +  L+ L L  N    +P+EI +L KL  L+L  N  T  
Sbjct: 42  LRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIF 101

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
           P        L+ L LS +QL++LP  I  L+ L+SL L  N+L +LP EI  L+ L E  
Sbjct: 102 PKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQSLHLDGNQLTSLPKEIGQLQNLFE-- 159

Query: 248 KSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
             L L +NKL+TLP EI  L+ L  L L  N   ++
Sbjct: 160 --LNLQDNKLKTLPKEIGQLQKLEVLRLYSNSFSLK 193



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/174 (37%), Positives = 94/174 (54%), Gaps = 3/174 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N L+  P    +  NLR L+L+ N++T LP+ I     L  L    N  T
Sbjct: 17  QNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFT 76

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLPK++  L+ L+  NL  N+   FP +I    +LK+L L  + L  +P+EI  L  L
Sbjct: 77  --SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNL 134

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
             L L GN LT +P   G L  L  L L DN+L++LP  I  L+ L+ L L++N
Sbjct: 135 QSLHLDGNQLTSLPKEIGQLQNLFELNLQDNKLKTLPKEIGQLQKLEVLRLYSN 188



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/145 (35%), Positives = 69/145 (47%), Gaps = 19/145 (13%)

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           +G + L  +PR I     L  L+L GN LT +P   G L  L  L L+ NQL SLP  I 
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIG 60

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKCL-------------------SEKLKSLLLHNNK 256
            L+ L+ L L  N+  +LP EI  L+ L                    + LK L L  ++
Sbjct: 61  QLQNLERLDLAGNQFTSLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQ 120

Query: 257 LRTLPTEIITLKCLSELSLRDNPLV 281
           L+TLP EI+ L+ L  L L  N L 
Sbjct: 121 LKTLPKEILLLQNLQSLHLDGNQLT 145


>gi|421083712|ref|ZP_15544583.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421101927|ref|ZP_15562537.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410368072|gb|EKP23450.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410433629|gb|EKP77969.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|456983304|gb|EMG19635.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 221

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 75/194 (38%), Positives = 104/194 (53%), Gaps = 7/194 (3%)

Query: 91  ITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIP 149
           +  LP+ I  F  L  L    N LT  SLPK++  L+ L+V NL+GNQ    P +I  + 
Sbjct: 6   LESLPRVIGLFQNLEKLNLDGNQLT--SLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQ 63

Query: 150 TLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            L+ L L  N    +P+EI +L  L VL+L GN LT +P   G L  LE L L+ NQ  S
Sbjct: 64  NLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTS 123

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           LP  I  L+ L++L L +N+    P EI       + LK L L  ++L+TLP EI+ L+ 
Sbjct: 124 LPKEIGQLQKLEALNLDHNRFTIFPKEIRQ----QQSLKWLRLSGDQLKTLPKEILLLQN 179

Query: 270 LSELSLRDNPLVIR 283
           L  L L  N   ++
Sbjct: 180 LQVLRLYSNSFSLK 193



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 81/173 (46%), Gaps = 24/173 (13%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           + +  L L  N  +  P    +  NL  LDL  N+ T                       
Sbjct: 40  QKLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFT----------------------- 76

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLPK++  L+NL+V NL+GNQL   P +I  +  L+ L L  N    +P+EI +L KL 
Sbjct: 77  -SLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLE 135

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
            L+L  N  T  P        L+ L LS +QL++LP  I  L+ L+ L L++N
Sbjct: 136 ALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQVLRLYSN 188



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 48/123 (39%), Positives = 64/123 (52%), Gaps = 4/123 (3%)

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           +G + L  +PR I     L  L+L GN LT +P   G L +L  L L+ NQ  SLP  I 
Sbjct: 1   MGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAGNQFTSLPKEIG 60

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            L+ L+ L L  N+  +LP EI  L    + L+ L L  N+L +LP EI  L+ L  L L
Sbjct: 61  QLQNLERLDLDGNQFTSLPKEIGQL----QNLRVLNLAGNQLTSLPKEIGQLQNLERLDL 116

Query: 276 RDN 278
             N
Sbjct: 117 AGN 119



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 3/131 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N  +  P    +  NLR L+L+ N++T LP+ I     L  L    N  T
Sbjct: 63  QNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFT 122

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLPK++  L+ L+  NL  N+   FP +I    +LK+L L  + L  +P+EI  L  L
Sbjct: 123 --SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNL 180

Query: 175 HVLSLGGNSLT 185
            VL L  NS +
Sbjct: 181 QVLRLYSNSFS 191


>gi|429962037|gb|ELA41581.1| hypothetical protein VICG_01329 [Vittaforma corneae ATCC 50505]
          Length = 425

 Score =  109 bits (272), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/213 (38%), Positives = 116/213 (54%), Gaps = 7/213 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNN 111
           K+   +  L L++NNL   P       NL++L L NN +  LP  I     L  L   +N
Sbjct: 117 KRLVKLKKLYLWNNNLKSLPPEIGDLVNLKTLHLDNNNLKTLPSEIRRLVSLRKLYLSDN 176

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
               ++LP ++  LKNL+  +LSGN+L+    +I  +  L+ L L  N    +P EI KL
Sbjct: 177 --NFKTLPVEIGELKNLQELSLSGNKLKALSAEIGKLVNLQDLNLNGNEFELLPAEIGKL 234

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L+VL    N LT +P    +L  L+ L L  N+LE+LP+ I  LK L+ L  + NKL+
Sbjct: 235 ENLNVLYFRSNKLTTLPAEIRELKNLQYLYLDYNKLETLPSDIGELKNLQYLHFNCNKLK 294

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           +LP+EI  LK     L+ L L NNKL+ LP+EI
Sbjct: 295 SLPSEIGELK----NLQYLDLRNNKLKILPSEI 323



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/233 (36%), Positives = 120/233 (51%), Gaps = 7/233 (3%)

Query: 51  YNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIAR 109
           + + PEN   + +    ++    N  +   L+ L L NN +  LP  I +   L TL   
Sbjct: 92  FERYPENETKVSIPFQGITSIDSNIKRLVKLKKLYLWNNNLKSLPPEIGDLVNLKTLHLD 151

Query: 110 NNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREIN 169
           NN L  ++LP ++  L +L+   LS N  +  P++I ++  L+ L L  N L  +  EI 
Sbjct: 152 NNNL--KTLPSEIRRLVSLRKLYLSDNNFKTLPVEIGELKNLQELSLSGNKLKALSAEIG 209

Query: 170 KLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           KL  L  L+L GN    +P   G L  L  L    N+L +LPA I  LK L+ L L  NK
Sbjct: 210 KLVNLQDLNLNGNEFELLPAEIGKLENLNVLYFRSNKLTTLPAEIRELKNLQYLYLDYNK 269

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           L TLP++I  LK     L+ L  + NKL++LP+EI  LK L  L LR+N L I
Sbjct: 270 LETLPSDIGELK----NLQYLHFNCNKLKSLPSEIGELKNLQYLDLRNNKLKI 318



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 91/185 (49%), Gaps = 27/185 (14%)

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            +  +   I +L KL  L L  N+L  +P   GDL  L+ L L +N L++LP+ I  L  
Sbjct: 108 GITSIDSNIKRLVKLKKLYLWNNNLKSLPPEIGDLVNLKTLHLDNNNLKTLPSEIRRLVS 167

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L+ L L +N  +TLP EI  LK L E    L L  NKL+ L  EI  L  L +L+L  N 
Sbjct: 168 LRKLYLSDNNFKTLPVEIGELKNLQE----LSLSGNKLKALSAEIGKLVNLQDLNLNGNE 223

Query: 280 L--------------VIRFVSD-MTYKPPSLLELASRTLKVHEIDYSQ-EHLPQNL---- 319
                          V+ F S+ +T  P  + EL  + L+   +DY++ E LP ++    
Sbjct: 224 FELLPAEIGKLENLNVLYFRSNKLTTLPAEIREL--KNLQYLYLDYNKLETLPSDIGELK 281

Query: 320 -VQYL 323
            +QYL
Sbjct: 282 NLQYL 286


>gi|326441151|ref|ZP_08215885.1| hypothetical protein SclaA2_08794 [Streptomyces clavuligerus ATCC
           27064]
          Length = 309

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 137/294 (46%), Gaps = 39/294 (13%)

Query: 24  IKTLDFSYSSLDS-----ETLATQIEL-LPNNDYNKKPE------NIDTLLLYHNNLSFF 71
           +  LD S++ LD        L    EL L +N +++ P+       +  L LY N LS  
Sbjct: 1   MAALDLSFNLLDDLPADLGRLHRLTELRLDSNQFSRFPDAVLGLTGLQVLSLYRNGLSNV 60

Query: 72  PDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT---------------- 114
           P        +R L+L+ NR++ +P  I     L TL   +N LT                
Sbjct: 61  PSGLGGLREIRVLNLAGNRLSSVPAEIGALSRLHTLDLGHNELTDIPPSLGDVTGLSRYL 120

Query: 115 ------AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREI 168
                   S+P  +  L +L+  N++ N+L   P +  D+ +L+ L L +N L  +PR I
Sbjct: 121 YLSDNKITSVPDSLCRLGHLRYLNITDNRLTALPERFGDLASLRELRLYHNRLTGLPRSI 180

Query: 169 NKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
             L +L    L GN LT +P+  G L  L  L L DN++ +LP +I  L  L  L L NN
Sbjct: 181 GALRELREAHLMGNRLTGLPEEIGGLADLRELRLMDNRVTALPDTIGGLVRLTRLDLRNN 240

Query: 229 KLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           +LR +P  I  L    ++L  L L NN+L  LP  +  L  L +L LR NPL +
Sbjct: 241 ELRAVPDAIGRL----DRLTHLDLRNNRLHELPPTLAALPRLEKLDLRWNPLAL 290



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 60/184 (32%), Positives = 97/184 (52%), Gaps = 5/184 (2%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N ++  PD+  +  +LR L++++NR+T LP+   +   L  L   +N LT   LP
Sbjct: 120 LYLSDNKITSVPDSLCRLGHLRYLNITDNRLTALPERFGDLASLRELRLYHNRLTG--LP 177

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
           + +  L+ L+  +L GN+L   P +I  +  L+ L L +N +  +P  I  L +L  L L
Sbjct: 178 RSIGALRELREAHLMGNRLTGLPEEIGGLADLRELRLMDNRVTALPDTIGGLVRLTRLDL 237

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN--KLRTLPTEI 237
             N L  +PD  G L +L  L L +N+L  LP +++ L  L+ L L  N   L  LP  +
Sbjct: 238 RNNELRAVPDAIGRLDRLTHLDLRNNRLHELPPTLAALPRLEKLDLRWNPLALDPLPAWV 297

Query: 238 ITLK 241
            +L+
Sbjct: 298 SSLE 301


>gi|281362655|ref|NP_001163746.1| scribbled, isoform L [Drosophila melanogaster]
 gi|272477196|gb|ACZ95040.1| scribbled, isoform L [Drosophila melanogaster]
          Length = 2585

 Score =  108 bits (271), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 85/251 (33%), Positives = 127/251 (50%), Gaps = 15/251 (5%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           +++L L  N L   P+  S+ T L+ LDL +N I  LP  +   P L  L   +N L  +
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQL--Q 211

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            LP ++  L  L   ++S N+LE+ P +I  + +L  L L  N L  +P  I KL +L +
Sbjct: 212 RLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTI 271

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L  + DT G+   ++ LIL++N L  LPASI  +  L +L +  N L  LP E
Sbjct: 272 LKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLE 331

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
           I   +C +  L  L L +NKL+ LP E+     L  L +  N L+        Y P SL+
Sbjct: 332 I--GQCAN--LGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLL--------YLPYSLV 379

Query: 297 ELASRTLKVHE 307
            L  + + + E
Sbjct: 380 NLQLKAVWLSE 390



 Score =  106 bits (264), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 75/225 (33%), Positives = 115/225 (51%), Gaps = 9/225 (4%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTA 115
           ++ L L  N++   P N  +   LR L LS+N I  LP  I NF   +   ++RN++   
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDI--- 95

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P D+ +L++L+V + S N + + P     +  L  L L + SL  +P +   L +L 
Sbjct: 96  PDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLE 155

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L  +P+T   L +L+ L L DN++E LP  +  L  L  L L +N+L+ LP 
Sbjct: 156 SLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPP 215

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           E+  L     KL  L +  N+L  LP EI  L  L++L L  N L
Sbjct: 216 ELGLLT----KLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLL 256



 Score =  101 bits (252), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 83/241 (34%), Positives = 108/241 (44%), Gaps = 7/241 (2%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A  I  LP N +  +   +  L L  N +   P +   F NL  LD+S N I  +P  I 
Sbjct: 46  ANHIRDLPKNFF--RLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIK 103

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
           +   S  +A  +      LP   S LKNL V  L+   L   P     +  L+ L L  N
Sbjct: 104 HLQ-SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELREN 162

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L H+P  I++L KL  L LG N + D+P   G L  L  L L  NQL+ LP  +  L  
Sbjct: 163 LLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTK 222

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L  L +  N+L  LP EI  L  L++    L L  N L  LP  I  L  L+ L L  N 
Sbjct: 223 LTYLDVSENRLEELPNEISGLVSLTD----LDLAQNLLEALPDGIAKLSRLTILKLDQNR 278

Query: 280 L 280
           L
Sbjct: 279 L 279



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 90/199 (45%), Gaps = 27/199 (13%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L HN L   P      T L  LD+S NR+  LP  I+    L+ L    NLL  E+LP
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLL--EALP 260

Query: 120 KDMSNLKNLKVFNLSGNQLE-----------------------QFPIQILDIPTLKYLYL 156
             ++ L  L +  L  N+L+                       + P  I  +  L  L +
Sbjct: 261 DGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNV 320

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
             N+L ++P EI +   L VLSL  N L  +P   G+   L  L +S NQL  LP S+ N
Sbjct: 321 DRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVN 380

Query: 217 LKMLKSLLLHNNKLRTLPT 235
           L+ LK++ L  N+ + L T
Sbjct: 381 LQ-LKAVWLSENQSQPLLT 398



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 4/155 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           ++  L L  N L   PD  +K + L  L L  NR+  L   + N   +  LI   N L+ 
Sbjct: 245 SLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLS- 303

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP  +  +  L   N+  N LE  P++I     L  L L +N L  +P E+     LH
Sbjct: 304 -ELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLH 362

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           VL + GN L  +P +  +L QL+A+ LS+NQ + L
Sbjct: 363 VLDVSGNQLLYLPYSLVNL-QLKAVWLSENQSQPL 396



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 4/155 (2%)

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           + L+   L  N +   P     +  L+ L L +N +  +P +I     L  L +  N + 
Sbjct: 37  RTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIP 96

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           DIPD    L  L+    S N +  LP+  S LK L  L L++  L TLP +  +L     
Sbjct: 97  DIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLT---- 152

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +L+SL L  N L+ LP  I  L  L  L L DN +
Sbjct: 153 QLESLELRENLLKHLPETISQLTKLKRLDLGDNEI 187



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 4/112 (3%)

Query: 49  NDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLI 107
           ND     EN+  L+L  N LS  P +  + T L +L++  N + +LP  I     L  L 
Sbjct: 283 NDTLGNCENMQELILTENFLSELPASIGQMTKLNNLNVDRNALEYLPLEIGQCANLGVLS 342

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
            R+N L  + LP ++ N   L V ++SGNQL   P  ++++  LK ++L  N
Sbjct: 343 LRDNKL--KKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSEN 391


>gi|455790935|gb|EMF42777.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 423

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 96/244 (39%), Positives = 129/244 (52%), Gaps = 16/244 (6%)

Query: 38  TLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQA 97
           +L T+IE L      K  +N+D   L HN  +           L +LDL +N++  +P+ 
Sbjct: 170 SLPTEIEQL------KSLKNLD---LNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKE 220

Query: 98  ITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL 156
           I     L  L+   N LT  SLPK++  L+NLK  NL  N+ + FP++IL++  L  L L
Sbjct: 221 IRQLKSLKVLMLTGNQLT--SLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNL 278

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
             N L   P+E+ +L  L  LSL  N +T +P     L  L+ L LS N++  LP  I  
Sbjct: 279 YYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQ 338

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           LK L+ L L NNKL  LP EI  LK    KL+ L L NN+L TLP EI  LK L  L L 
Sbjct: 339 LKNLEWLSLSNNKLNALPKEIGQLK----KLQRLELGNNQLTTLPKEIEQLKNLQRLELD 394

Query: 277 DNPL 280
            NP+
Sbjct: 395 SNPI 398



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 118/229 (51%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L L    L   P+   +  NL+ LDL  N  T L + I     L  L   NN L
Sbjct: 40  PADVRNLDLSFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKL 99

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++  L+NL+  +L  N+L   P +I     L+ L L NN L  +P+EI +L  
Sbjct: 100 TV--LPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQN 157

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  LSL  N L  +P     L  L+ L L+ N+  ++   +  L+ L++L L +NKL+T+
Sbjct: 158 LQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTI 217

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK     LK L+L  N+L +LP EI  L+ L  L+L +N   I
Sbjct: 218 PKEIRQLKS----LKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQI 262



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 123/247 (49%), Gaps = 22/247 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +++  L L +N L+  P    +  NL+ L L +N + +LP+ I  F  L  L   NN LT
Sbjct: 87  KDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLT 146

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+  +L  N+L   P +I  + +LK L L +N    V +E+  L  L
Sbjct: 147 V--LPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETL 204

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  IP     L  L+ L+L+ NQL SLP  I  L+ LK+L L  N+ +  P
Sbjct: 205 ENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFP 264

Query: 235 TEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            EI+ LK L                    + LK L L++N++ TLP E+  L  L EL L
Sbjct: 265 VEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHL 324

Query: 276 RDNPLVI 282
             N + I
Sbjct: 325 SGNKITI 331



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 119/244 (48%), Gaps = 18/244 (7%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
             ++ LD S+  L +         LPN     K  N+  L L  N  +       +  +L
Sbjct: 41  ADVRNLDLSFLGLKT---------LPNKIGQLK--NLQKLDLGGNEPTILSKEIWQLKDL 89

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           + L+L+NN++T LP+ I     L  L   +N L   +LPK++   KNL+  NL  N+L  
Sbjct: 90  QKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELV--NLPKEIGQFKNLQKLNLDNNKLTV 147

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +I  +  L+ L L +N L  +P EI +L  L  L L  N  T +      L  LE L
Sbjct: 148 LPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENL 207

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L  N+L+++P  I  LK LK L+L  N+L +LP EI  L    + LK+L L  N+ +  
Sbjct: 208 DLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQL----QNLKTLNLGENRFQIF 263

Query: 261 PTEI 264
           P EI
Sbjct: 264 PVEI 267



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 64/163 (39%), Positives = 87/163 (53%), Gaps = 4/163 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++L K + N  +++  +LS   L+  P +I  +  L+ L LG N    + +EI +L  L 
Sbjct: 31  KNLEKALQNPADVRNLDLSFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQ 90

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L+L  N LT +P   G L  L+ L L  N+L +LP  I   K L+ L L NNKL  LP 
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPK 150

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           EI  L+ L E    L L +NKL +LPTEI  LK L  L L  N
Sbjct: 151 EIGQLQNLQE----LSLLSNKLISLPTEIEQLKSLKNLDLNHN 189



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 3/123 (2%)

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDM 122
           Y+N L  FP    +  +L+ L L +N+IT LP  +T  P L  L    N +T   LPK++
Sbjct: 279 YYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITI--LPKEI 336

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             LKNL+  +LS N+L   P +I  +  L+ L LGNN L  +P+EI +L  L  L L  N
Sbjct: 337 LQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSN 396

Query: 183 SLT 185
            ++
Sbjct: 397 PIS 399



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 5/113 (4%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           LYHN ++  P   ++  +L+ L LS N+IT LP+ I     L  L   NN L A  LPK+
Sbjct: 301 LYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNA--LPKE 358

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           +  LK L+   L  NQL   P +I  +  L+ L L +N ++  P+E  ++ KL
Sbjct: 359 IGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS--PKEKERIRKL 409


>gi|424840764|ref|ZP_18265389.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
 gi|395318962|gb|EJF51883.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
          Length = 485

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 84/239 (35%), Positives = 120/239 (50%), Gaps = 20/239 (8%)

Query: 62  LLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKD 121
           L     L   P+   +  NL  L L++  I  LP +I       ++   N    E LP++
Sbjct: 88  LWGQEALEELPEEIGQLQNLEVLILNSTGIKRLPASIGQLQNLQILDLGNCQLQE-LPEE 146

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L+NL+  NLS NQLE+ P  I  +  LK   L +N L  +P E ++L +L  L+L  
Sbjct: 147 LGQLQNLEALNLSANQLEELPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELALAN 206

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L+ +P  FG L  L+ L LS+NQL+ LPAS+  LK L+ L L +N L  +P +I  L+
Sbjct: 207 NLLSFLPSNFGQLQALKTLQLSENQLDQLPASLGQLKQLELLELQDNDLGQIPAQIGQLQ 266

Query: 242 CLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L E                    LKSL +  N+L  LP E   LK L EL L++N L+
Sbjct: 267 SLVELDLSDNFIQQLPPEIGQLQALKSLFITENELSQLPPEFAQLKNLQELQLQENKLI 325



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/267 (34%), Positives = 137/267 (51%), Gaps = 20/267 (7%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIAR--NNLLTA 115
           ++ L L +N LSF P N  +   L++L LS N++  LP ++       L+    N+L   
Sbjct: 199 LEELALANNLLSFLPSNFGQLQALKTLQLSENQLDQLPASLGQLKQLELLELQDNDL--- 255

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P  +  L++L   +LS N ++Q P +I  +  LK L++  N L+ +P E  +L  L 
Sbjct: 256 GQIPAQIGQLQSLVELDLSDNFIQQLPPEIGQLQALKSLFITENELSQLPPEFAQLKNLQ 315

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L  +P  FG L QLE L LS+N+LE+LP SI  LK L SL L NN++   P 
Sbjct: 316 ELQLQENKLIALPINFGKLSQLEELQLSENKLEALPKSIKRLKKLSSLNLGNNEIYLFPK 375

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
               +K     L +L L  N +  LP EI  L+ L  L L DN        ++   PP L
Sbjct: 376 NACNIK----NLLALDLEGNYIEELPEEISQLQNLEFLILYDN--------ELRNLPPYL 423

Query: 296 LEL-ASRTLKVHEIDYSQEHLPQNLVQ 321
            +L A R L++ + ++  E  P+ L Q
Sbjct: 424 QDLTALRRLEISDNEF--ETFPEVLYQ 448



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 113/224 (50%), Gaps = 7/224 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N++ L L  N L   P +  +   L+  DLS+NR+  LP   +    L  L   NNLL+
Sbjct: 151 QNLEALNLSANQLEELPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELALANNLLS 210

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP +   L+ LK   LS NQL+Q P  +  +  L+ L L +N L  +P +I +L  L
Sbjct: 211 F--LPSNFGQLQALKTLQLSENQLDQLPASLGQLKQLELLELQDNDLGQIPAQIGQLQSL 268

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N +  +P   G L  L++L +++N+L  LP   + LK L+ L L  NKL  LP
Sbjct: 269 VELDLSDNFIQQLPPEIGQLQALKSLFITENELSQLPPEFAQLKNLQELQLQENKLIALP 328

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
                L  L E    L L  NKL  LP  I  LK LS L+L +N
Sbjct: 329 INFGKLSQLEE----LQLSENKLEALPKSIKRLKKLSSLNLGNN 368



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/227 (30%), Positives = 107/227 (47%), Gaps = 32/227 (14%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSN 124
           N+L   P    +  +L  LDLS+N I  LP  I     L +L    N L+   LP + + 
Sbjct: 253 NDLGQIPAQIGQLQSLVELDLSDNFIQQLPPEIGQLQALKSLFITENELS--QLPPEFAQ 310

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG---- 180
           LKNL+   L  N+L   PI    +  L+ L L  N L  +P+ I +L KL  L+LG    
Sbjct: 311 LKNLQELQLQENKLIALPINFGKLSQLEELQLSENKLEALPKSIKRLKKLSSLNLGNNEI 370

Query: 181 -------------------GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
                              GN + ++P+    L  LE LIL DN+L +LP  + +L  L+
Sbjct: 371 YLFPKNACNIKNLLALDLEGNYIEELPEEISQLQNLEFLILYDNELRNLPPYLQDLTALR 430

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLK 268
            L + +N+  T P  +  ++    +L  L+L+ ++    PT+I TLK
Sbjct: 431 RLEISDNEFETFPEVLYQMR----QLNDLILNVDQFD--PTKIQTLK 471



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 60/163 (36%), Positives = 75/163 (46%), Gaps = 28/163 (17%)

Query: 142 PIQILDIPTLKYLYL-GNNSLNHVPREINKLCKLHV-----------------------L 177
           P +I     L+YL L G  +L  +P EI +L  L V                       L
Sbjct: 74  PAKIGQYSELRYLSLWGQEALEELPEEIGQLQNLEVLILNSTGIKRLPASIGQLQNLQIL 133

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            LG   L ++P+  G L  LEAL LS NQLE LP SI  L+ LK   L +N+L+ LP E 
Sbjct: 134 DLGNCQLQELPEELGQLQNLEALNLSANQLEELPPSIGQLQALKMADLSSNRLQELPNEF 193

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             L  L E    L L NN L  LP+    L+ L  L L +N L
Sbjct: 194 SQLTQLEE----LALANNLLSFLPSNFGQLQALKTLQLSENQL 232


>gi|301771802|ref|XP_002921342.1| PREDICTED: LOW QUALITY PROTEIN: malignant fibrous
           histiocytoma-amplified sequence 1-like [Ailuropoda
           melanoleuca]
          Length = 1042

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 81/241 (33%), Positives = 115/241 (47%), Gaps = 31/241 (12%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTA------ 115
           L HN L   P       +L  LD+S NR+ HLP +++  F L TL   +N LTA      
Sbjct: 137 LSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLFRLRTLDVDHNQLTAFPRQLL 196

Query: 116 ---------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                            LP+D+S L+ LK+  LSG +L   P    ++  L      NN 
Sbjct: 197 QLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTLPSGFCELAXLD-----NNG 251

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P + + L +L +L+L  N   + P     L  LE L LS NQL S+P+ IS L  L
Sbjct: 252 LQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQLTSVPSLISGLSRL 311

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +L L NN++R LP  I+ L  L E    L+L  N++  LP     L  +    ++DNPL
Sbjct: 312 LTLWLDNNRIRYLPDSIVELTGLEE----LVLQGNQIAVLPDNFGQLSRVGLWKIKDNPL 367

Query: 281 V 281
           +
Sbjct: 368 I 368



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 91/282 (32%), Positives = 128/282 (45%), Gaps = 27/282 (9%)

Query: 57  NIDTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +I+ L L +N L   PD   S   +LR L L  NR   LP A+      L+ L   +N L
Sbjct: 59  DIEVLNLGNNGLEEVPDGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLTELDVSHNRL 118

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA    + +S L+ L+  NLS NQL   P Q+  +  L+ L +  N L H+P  ++ L +
Sbjct: 119 TALGA-EVVSALRELRKLNLSHNQLPALPAQLGALAHLEELDVSFNRLAHLPDSLSCLFR 177

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L +  N LT  P     L  LE L +S N+L  LP  IS L+ LK L L   +L TL
Sbjct: 178 LRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGTL 237

Query: 234 PTEIITLKCLS--------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           P+    L  L               ++LK L L +N     P  ++ L  L EL L  N 
Sbjct: 238 PSGFCELAXLDNNGLQALPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLSRNQ 297

Query: 280 LVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQ 321
           L            PSL+   SR L +   +    +LP ++V+
Sbjct: 298 LT---------SVPSLISGLSRLLTLWLDNNRIRYLPDSIVE 330



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 96/200 (48%), Gaps = 21/200 (10%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT-----------NFPLST 105
            + TL + HN L+ FP    +   L  LD+S+NR+  LP+ I+              L T
Sbjct: 177 RLRTLDVDHNQLTAFPRQLLQLAALEELDVSSNRLRGLPEDISALRALKILWLSGAELGT 236

Query: 106 LIAR--------NNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           L +         NN L A  LP   S L+ LK+ NLS N  E+FP  +L +  L+ LYL 
Sbjct: 237 LPSGFCELAXLDNNGLQA--LPAQFSCLQRLKMLNLSSNLFEEFPAALLPLAGLEELYLS 294

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
            N L  VP  I+ L +L  L L  N +  +PD+  +L  LE L+L  NQ+  LP +   L
Sbjct: 295 RNQLTSVPSLISGLSRLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPDNFGQL 354

Query: 218 KMLKSLLLHNNKLRTLPTEI 237
             +    + +N L   P E+
Sbjct: 355 SRVGLWKIKDNPLIQPPYEV 374



 Score = 46.6 bits (109), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 49/140 (35%), Positives = 66/140 (47%), Gaps = 13/140 (9%)

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREIN-KLCKLHVLSLGGNSLTDIPDTFGDL-YQLE 198
            P  I DI  L    LGNN L  VP  +   L  L VL L  N    +P    +L + L 
Sbjct: 53  LPANIGDIEVLN---LGNNGLEEVPDGLGSALGSLRVLVLRRNRFARLPPAVAELGHHLT 109

Query: 199 ALILSDNQLESLPAS-ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
            L +S N+L +L A  +S L+ L+ L L +N+L  LP ++  L  L E    L +  N+L
Sbjct: 110 ELDVSHNRLTALGAEVVSALRELRKLNLSHNQLPALPAQLGALAHLEE----LDVSFNRL 165

Query: 258 RTLPTEIITLKCLSELSLRD 277
             LP    +L CL  L   D
Sbjct: 166 AHLPD---SLSCLFRLRTLD 182


>gi|255089725|ref|XP_002506784.1| predicted protein [Micromonas sp. RCC299]
 gi|226522057|gb|ACO68042.1| predicted protein [Micromonas sp. RCC299]
          Length = 210

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 70/170 (41%), Positives = 91/170 (53%), Gaps = 3/170 (1%)

Query: 75  ASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNL 133
           A+  +  R L L++N++  +P  I     L  L    N LT  S+P ++  L +LK  NL
Sbjct: 37  AANRSEHRVLHLTDNQLRSVPAEIGQLASLRELYLYGNQLT--SVPVEIGQLTSLKKLNL 94

Query: 134 SGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGD 193
            GNQL   P +I    +L +L L NN L  VP EI +L  L  L L GN LT +P   G 
Sbjct: 95  GGNQLTTVPAEIGQFTSLLWLSLDNNKLTSVPAEIEQLKSLMRLWLAGNQLTSVPAEIGQ 154

Query: 194 LYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           L  L  L+L  NQL S+PA I  L ML+ L L  N+LR+LP EI  L  L
Sbjct: 155 LTSLRELLLKGNQLTSVPAEIGQLTMLRELRLEGNQLRSLPAEIGQLTSL 204



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 66/159 (41%), Positives = 88/159 (55%), Gaps = 4/159 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           S+P ++  L +L+   L GNQL   P++I  + +LK L LG N L  VP EI +   L  
Sbjct: 55  SVPAEIGQLASLRELYLYGNQLTSVPVEIGQLTSLKKLNLGGNQLTTVPAEIGQFTSLLW 114

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           LSL  N LT +P     L  L  L L+ NQL S+PA I  L  L+ LLL  N+L ++P E
Sbjct: 115 LSLDNNKLTSVPAEIEQLKSLMRLWLAGNQLTSVPAEIGQLTSLRELLLKGNQLTSVPAE 174

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
           I  L  L E    L L  N+LR+LP EI  L  L +L++
Sbjct: 175 IGQLTMLRE----LRLEGNQLRSLPAEIGQLTSLKKLTI 209



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/152 (42%), Positives = 84/152 (55%), Gaps = 4/152 (2%)

Query: 129 KVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
           +V +L+ NQL   P +I  + +L+ LYL  N L  VP EI +L  L  L+LGGN LT +P
Sbjct: 44  RVLHLTDNQLRSVPAEIGQLASLRELYLYGNQLTSVPVEIGQLTSLKKLNLGGNQLTTVP 103

Query: 189 DTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLK 248
              G    L  L L +N+L S+PA I  LK L  L L  N+L ++P EI  L  L E   
Sbjct: 104 AEIGQFTSLLWLSLDNNKLTSVPAEIEQLKSLMRLWLAGNQLTSVPAEIGQLTSLRE--- 160

Query: 249 SLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            LLL  N+L ++P EI  L  L EL L  N L
Sbjct: 161 -LLLKGNQLTSVPAEIGQLTMLRELRLEGNQL 191



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 59/162 (36%), Positives = 77/162 (47%), Gaps = 3/162 (1%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L  N L   P    +  +LR L L  N++T +P  I     L  L    N LT  ++P +
Sbjct: 48  LTDNQLRSVPAEIGQLASLRELYLYGNQLTSVPVEIGQLTSLKKLNLGGNQLT--TVPAE 105

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +    +L   +L  N+L   P +I  + +L  L+L  N L  VP EI +L  L  L L G
Sbjct: 106 IGQFTSLLWLSLDNNKLTSVPAEIEQLKSLMRLWLAGNQLTSVPAEIGQLTSLRELLLKG 165

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL 223
           N LT +P   G L  L  L L  NQL SLPA I  L  LK L
Sbjct: 166 NQLTSVPAEIGQLTMLRELRLEGNQLRSLPAEIGQLTSLKKL 207



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 59/165 (35%), Positives = 81/165 (49%), Gaps = 9/165 (5%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N     P  I  L       LY N L+  P    + T+L+ L+L  N++T +P  I 
Sbjct: 48  LTDNQLRSVPAEIGQLASLRELYLYGNQLTSVPVEIGQLTSLKKLNLGGNQLTTVPAEIG 107

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
            F  L  L   NN LT  S+P ++  LK+L    L+GNQL   P +I  + +L+ L L  
Sbjct: 108 QFTSLLWLSLDNNKLT--SVPAEIEQLKSLMRLWLAGNQLTSVPAEIGQLTSLRELLLKG 165

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILS 203
           N L  VP EI +L  L  L L GN L  +P   G L  L+ L +S
Sbjct: 166 NQLTSVPAEIGQLTMLRELRLEGNQLRSLPAEIGQLTSLKKLTIS 210


>gi|418676212|ref|ZP_13237496.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|400323358|gb|EJO71208.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
          Length = 313

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 82/214 (38%), Positives = 113/214 (52%), Gaps = 7/214 (3%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLK 126
           L   P     F NL  L+L  N++T LP+ I     L  L   +N LT  SLPK+M  L+
Sbjct: 57  LDSLPRVIGLFQNLEKLNLVGNQLTTLPKEIGRLQKLRVLNLAHNQLT--SLPKEMELLQ 114

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL++ NL  N+   FP +   +  L+ L L +N L  +P+E+  L  L  L L GN    
Sbjct: 115 NLEILNLDDNEFTSFPKETRQLQKLRILNLADNQLTSLPKEMELLQNLERLDLAGNRFKI 174

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P     L  LEAL L  NQ  S P  I   + LK L L  N+L+TL  EI+ L    + 
Sbjct: 175 LPKEMELLQNLEALNLGHNQFTSFPKEIRRQQNLKWLYLSRNQLKTLSKEIVEL----QN 230

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L+SL L  N+L ++P EI  L+ L EL+L++N L
Sbjct: 231 LQSLHLDGNQLSSIPKEIGQLQNLFELNLQNNKL 264



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/213 (33%), Positives = 108/213 (50%), Gaps = 26/213 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI----------------T 99
           +N++ L L  N L+  P    +   LR L+L++N++T LP+ +                T
Sbjct: 68  QNLEKLNLVGNQLTTLPKEIGRLQKLRVLNLAHNQLTSLPKEMELLQNLEILNLDDNEFT 127

Query: 100 NFP--------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
           +FP        L  L   +N LT  SLPK+M  L+NL+  +L+GN+ +  P ++  +  L
Sbjct: 128 SFPKETRQLQKLRILNLADNQLT--SLPKEMELLQNLERLDLAGNRFKILPKEMELLQNL 185

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           + L LG+N     P+EI +   L  L L  N L  +     +L  L++L L  NQL S+P
Sbjct: 186 EALNLGHNQFTSFPKEIRRQQNLKWLYLSRNQLKTLSKEIVELQNLQSLHLDGNQLSSIP 245

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
             I  L+ L  L L NNKL+TLP EI  L+ L 
Sbjct: 246 KEIGQLQNLFELNLQNNKLKTLPKEIGLLQNLQ 278



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 73/138 (52%), Gaps = 4/138 (2%)

Query: 145 ILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD 204
           IL++     + +G + L+ +PR I     L  L+L GN LT +P   G L +L  L L+ 
Sbjct: 41  ILEMSMSTGVSMGLHELDSLPRVIGLFQNLEKLNLVGNQLTTLPKEIGRLQKLRVLNLAH 100

Query: 205 NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           NQL SLP  +  L+ L+ L L +N+  + P E   L    +KL+ L L +N+L +LP E+
Sbjct: 101 NQLTSLPKEMELLQNLEILNLDDNEFTSFPKETRQL----QKLRILNLADNQLTSLPKEM 156

Query: 265 ITLKCLSELSLRDNPLVI 282
             L+ L  L L  N   I
Sbjct: 157 ELLQNLERLDLAGNRFKI 174


>gi|195349707|ref|XP_002041384.1| GM10328 [Drosophila sechellia]
 gi|194123079|gb|EDW45122.1| GM10328 [Drosophila sechellia]
          Length = 1851

 Score =  108 bits (271), Expect = 3e-21,   Method: Composition-based stats.
 Identities = 85/251 (33%), Positives = 127/251 (50%), Gaps = 15/251 (5%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           +++L L  N L   P+  S+ T L+ LDL +N I  LP  +   P L  L   +N L  +
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQL--Q 211

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            LP ++  L  L   ++S N+LE+ P +I  + +L  L L  N L  +P  I KL +L +
Sbjct: 212 RLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLEALPDGIAKLSRLTI 271

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L  + DT G+   ++ LIL++N L  LPASI  +  L +L +  N L  LP E
Sbjct: 272 LKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLE 331

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
           I   +C +  L  L L +NKL+ LP E+     L  L +  N L+        Y P SL+
Sbjct: 332 I--GQCAN--LGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLL--------YLPYSLV 379

Query: 297 ELASRTLKVHE 307
            L  + + + E
Sbjct: 380 NLQLKAVWLSE 390



 Score =  105 bits (263), Expect = 3e-20,   Method: Composition-based stats.
 Identities = 75/225 (33%), Positives = 115/225 (51%), Gaps = 9/225 (4%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTA 115
           ++ L L  N++   P N  +   LR L LS+N I  LP  I NF   +   ++RN++   
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDI--- 95

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P D+ +L++L+V + S N + + P     +  L  L L + SL  +P +   L +L 
Sbjct: 96  PDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLE 155

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L  +P+T   L +L+ L L DN++E LP  +  L  L  L L +N+L+ LP 
Sbjct: 156 SLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPP 215

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           E+  L     KL  L +  N+L  LP EI  L  L++L L  N L
Sbjct: 216 ELGLLT----KLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLL 256



 Score =  101 bits (252), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 83/241 (34%), Positives = 108/241 (44%), Gaps = 7/241 (2%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A  I  LP N +  +   +  L L  N +   P +   F NL  LD+S N I  +P  I 
Sbjct: 46  ANHIRDLPKNFF--RLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIK 103

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
           +   S  +A  +      LP   S LKNL V  L+   L   P     +  L+ L L  N
Sbjct: 104 HLQ-SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELREN 162

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L H+P  I++L KL  L LG N + D+P   G L  L  L L  NQL+ LP  +  L  
Sbjct: 163 LLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTK 222

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L  L +  N+L  LP EI  L  L++    L L  N L  LP  I  L  L+ L L  N 
Sbjct: 223 LTYLDVSENRLEELPNEISGLVSLTD----LDLAQNLLEALPDGIAKLSRLTILKLDQNR 278

Query: 280 L 280
           L
Sbjct: 279 L 279



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 90/199 (45%), Gaps = 27/199 (13%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L HN L   P      T L  LD+S NR+  LP  I+    L+ L    NLL  E+LP
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLL--EALP 260

Query: 120 KDMSNLKNLKVFNLSGNQLE-----------------------QFPIQILDIPTLKYLYL 156
             ++ L  L +  L  N+L+                       + P  I  +  L  L +
Sbjct: 261 DGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLSELPASIGQMTKLSNLNV 320

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
             N+L ++P EI +   L VLSL  N L  +P   G+   L  L +S NQL  LP S+ N
Sbjct: 321 DRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVN 380

Query: 217 LKMLKSLLLHNNKLRTLPT 235
           L+ LK++ L  N+ + L T
Sbjct: 381 LQ-LKAVWLSENQSQPLLT 398



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 4/155 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           ++  L L  N L   PD  +K + L  L L  NR+  L   + N   +  LI   N L+ 
Sbjct: 245 SLTDLDLAQNLLEALPDGIAKLSRLTILKLDQNRLQRLNDTLGNCENMQELILTENFLS- 303

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP  +  +  L   N+  N LE  P++I     L  L L +N L  +P E+     LH
Sbjct: 304 -ELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLH 362

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           VL + GN L  +P +  +L QL+A+ LS+NQ + L
Sbjct: 363 VLDVSGNQLLYLPYSLVNL-QLKAVWLSENQSQPL 396



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Composition-based stats.
 Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 4/155 (2%)

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           + L+   L  N +   P     +  L+ L L +N +  +P +I     L  L +  N + 
Sbjct: 37  RTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIP 96

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           DIPD    L  L+    S N +  LP+  S LK L  L L++  L TLP +  +L     
Sbjct: 97  DIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLT---- 152

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +L+SL L  N L+ LP  I  L  L  L L DN +
Sbjct: 153 QLESLELRENLLKHLPETISQLTKLKRLDLGDNEI 187



 Score = 50.8 bits (120), Expect = 0.001,   Method: Composition-based stats.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 4/112 (3%)

Query: 49  NDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLI 107
           ND     EN+  L+L  N LS  P +  + T L +L++  N + +LP  I     L  L 
Sbjct: 283 NDTLGNCENMQELILTENFLSELPASIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLS 342

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
            R+N L  + LP ++ N   L V ++SGNQL   P  ++++  LK ++L  N
Sbjct: 343 LRDNKL--KKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSEN 391


>gi|186681684|ref|YP_001864880.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
 gi|186464136|gb|ACC79937.1| small GTP-binding protein [Nostoc punctiforme PCC 73102]
          Length = 1185

 Score =  108 bits (271), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/223 (34%), Positives = 118/223 (52%), Gaps = 7/223 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           +++ L+L    L+  PD  +  TNL  L LS N+IT +P+AI     L+ LI  +N +T 
Sbjct: 104 HLEELILIRVELTEIPDAIANLTNLTQLILSYNQITQIPEAIAKLSNLTVLIFSDNKIT- 162

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+ ++NL NL   NLS NQ+ Q P  I  +  L  LYL  N +  +P  I +L  L 
Sbjct: 163 -QIPEAIANLTNLTRLNLSSNQITQIPEVIAKLTNLTLLYLSGNQITEIPEAIAQLTNLT 221

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L L  N +T+IP+       L  L LS NQ+  +P +I+ L  LK L L +N++  +P 
Sbjct: 222 LLDLSDNKITEIPEAITQSTNLTVLDLSSNQITKIPEAIAQLTNLKLLYLSDNQITEIPE 281

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            +  L  L +    L L +N++  +P  +  L  L++L L  N
Sbjct: 282 ALANLTNLMQ----LHLSSNQITEIPEALANLTNLTQLYLSGN 320



 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 120/223 (53%), Gaps = 7/223 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L+L +N ++  P+  +K +NL  L  S+N+IT +P+AI N   L+ L   +N +T 
Sbjct: 127 NLTQLILSYNQITQIPEAIAKLSNLTVLIFSDNKITQIPEAIANLTNLTRLNLSSNQIT- 185

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+ ++ L NL +  LSGNQ+ + P  I  +  L  L L +N +  +P  I +   L 
Sbjct: 186 -QIPEVIAKLTNLTLLYLSGNQITEIPEAIAQLTNLTLLDLSDNKITEIPEAITQSTNLT 244

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           VL L  N +T IP+    L  L+ L LSDNQ+  +P +++NL  L  L L +N++  +P 
Sbjct: 245 VLDLSSNQITKIPEAIAQLTNLKLLYLSDNQITEIPEALANLTNLMQLHLSSNQITEIPE 304

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            +  L  L++    L L  N++  +P  +  L  L+ L L  N
Sbjct: 305 ALANLTNLTQ----LYLSGNQITEIPEALANLPNLTRLYLYSN 343



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 80/244 (32%), Positives = 126/244 (51%), Gaps = 13/244 (5%)

Query: 46  LPNNDYNKKPE---NIDTLLLYH---NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N   + PE   N+  L+  H   N ++  P+  +  TNL  L LS N+IT +P+A+ 
Sbjct: 271 LSDNQITEIPEALANLTNLMQLHLSSNQITEIPEALANLTNLTQLYLSGNQITEIPEALA 330

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
           N P L+ L   +N +T   +P+ ++NL NL    L  NQ+ + P  + ++  L  L L +
Sbjct: 331 NLPNLTRLYLYSNQIT--EIPEALANLTNLIQLVLFSNQIAEIPETLANLTNLIQLVLFS 388

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N +  +P  + KL  L  L L  N +T IP    +L  L  L LS NQ+  +P +++NL 
Sbjct: 389 NQIAEIPETLAKLTNLTRLDLRFNQITQIPKVIANLTNLTELHLSSNQITQIPEALANLT 448

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L  L   +N++  +P  I  L  L++    L L  N++  +P  I +L  L +L LR N
Sbjct: 449 NLTQLYFSSNQITQIPGAIAKLTNLTQ----LDLSGNQITEIPEAIESLSKLEKLDLRGN 504

Query: 279 PLVI 282
           PL I
Sbjct: 505 PLPI 508



 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 72/223 (32%), Positives = 120/223 (53%), Gaps = 7/223 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L  N ++  P+  ++ TNL+ L LS+N+IT +P+A+ N   L  L   +N +T 
Sbjct: 242 NLTVLDLSSNQITKIPEAIAQLTNLKLLYLSDNQITEIPEALANLTNLMQLHLSSNQIT- 300

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+ ++NL NL    LSGNQ+ + P  + ++P L  LYL +N +  +P  +  L  L 
Sbjct: 301 -EIPEALANLTNLTQLYLSGNQITEIPEALANLPNLTRLYLYSNQITEIPEALANLTNLI 359

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N + +IP+T  +L  L  L+L  NQ+  +P +++ L  L  L L  N++  +P 
Sbjct: 360 QLVLFSNQIAEIPETLANLTNLIQLVLFSNQIAEIPETLAKLTNLTRLDLRFNQITQIPK 419

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            I  L  L+E    L L +N++  +P  +  L  L++L    N
Sbjct: 420 VIANLTNLTE----LHLSSNQITQIPEALANLTNLTQLYFSSN 458



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/214 (34%), Positives = 99/214 (46%), Gaps = 7/214 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTAESLPKDMSN 124
           NNL   P       NLR LD+S N +  +P  +T    L  LI     LT   +P  ++N
Sbjct: 67  NNLKTLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVELT--EIPDAIAN 124

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L NL    LS NQ+ Q P  I  +  L  L   +N +  +P  I  L  L  L+L  N +
Sbjct: 125 LTNLTQLILSYNQITQIPEAIAKLSNLTVLIFSDNKITQIPEAIANLTNLTRLNLSSNQI 184

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T IP+    L  L  L LS NQ+  +P +I+ L  L  L L +NK+  +P  I      S
Sbjct: 185 TQIPEVIAKLTNLTLLYLSGNQITEIPEAIAQLTNLTLLDLSDNKITEIPEAITQ----S 240

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             L  L L +N++  +P  I  L  L  L L DN
Sbjct: 241 TNLTVLDLSSNQITKIPEAIAQLTNLKLLYLSDN 274



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/179 (31%), Positives = 88/179 (49%), Gaps = 3/179 (1%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L LY N ++  P+  +  TNL  L L +N+I  +P+ + N   L  L+  +N +  
Sbjct: 334 NLTRLYLYSNQITEIPEALANLTNLIQLVLFSNQIAEIPETLANLTNLIQLVLFSNQIA- 392

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+ ++ L NL   +L  NQ+ Q P  I ++  L  L+L +N +  +P  +  L  L 
Sbjct: 393 -EIPETLAKLTNLTRLDLRFNQITQIPKVIANLTNLTELHLSSNQITQIPEALANLTNLT 451

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            L    N +T IP     L  L  L LS NQ+  +P +I +L  L+ L L  N L   P
Sbjct: 452 QLYFSSNQITQIPGAIAKLTNLTQLDLSGNQITEIPEAIESLSKLEKLDLRGNPLPISP 510



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 100/221 (45%), Gaps = 27/221 (12%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLI-------------------ARNNLLTAESLP 119
             R LDLS   +T LP  I     L +LI                   + NNL T   LP
Sbjct: 17  GWRELDLSGQELTELPVEIGKLQQLESLILGKKVEGYERVGDHFLEKVSGNNLKT---LP 73

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            ++  L NL+  ++SGN LE  P  +  I  L+ L L    L  +P  I  L  L  L L
Sbjct: 74  LELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPDAIANLTNLTQLIL 133

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N +T IP+    L  L  LI SDN++  +P +I+NL  L  L L +N++  +P  I  
Sbjct: 134 SYNQITQIPEAIAKLSNLTVLIFSDNKITQIPEAIANLTNLTRLNLSSNQITQIPEVIAK 193

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L  L+     L L  N++  +P  I  L  L+ L L DN +
Sbjct: 194 LTNLT----LLYLSGNQITEIPEAIAQLTNLTLLDLSDNKI 230



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 49/137 (35%), Positives = 71/137 (51%), Gaps = 3/137 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L+L+ N ++  P+  +K TNL  LDL  N+IT +P+ I N   L+ L   +N +T 
Sbjct: 380 NLIQLVLFSNQIAEIPETLAKLTNLTRLDLRFNQITQIPKVIANLTNLTELHLSSNQIT- 438

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+ ++NL NL     S NQ+ Q P  I  +  L  L L  N +  +P  I  L KL 
Sbjct: 439 -QIPEALANLTNLTQLYFSSNQITQIPGAIAKLTNLTQLDLSGNQITEIPEAIESLSKLE 497

Query: 176 VLSLGGNSLTDIPDTFG 192
            L L GN L   P+  G
Sbjct: 498 KLDLRGNPLPISPEILG 514



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 56/192 (29%), Positives = 90/192 (46%), Gaps = 27/192 (14%)

Query: 121 DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG------------------NNSLN 162
           D +  +  +  +LSG +L + P++I  +  L+ L LG                   N+L 
Sbjct: 11  DRAVAEGWRELDLSGQELTELPVEIGKLQQLESLILGKKVEGYERVGDHFLEKVSGNNLK 70

Query: 163 HVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKS 222
            +P E+  L  L  L + GN L  IPD    +  LE LIL   +L  +P +I+NL  L  
Sbjct: 71  TLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPDAIANLTNLTQ 130

Query: 223 LLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN---- 278
           L+L  N++  +P  I  L  L+     L+  +NK+  +P  I  L  L+ L+L  N    
Sbjct: 131 LILSYNQITQIPEAIAKLSNLT----VLIFSDNKITQIPEAIANLTNLTRLNLSSNQITQ 186

Query: 279 -PLVIRFVSDMT 289
            P VI  ++++T
Sbjct: 187 IPEVIAKLTNLT 198


>gi|260788632|ref|XP_002589353.1| hypothetical protein BRAFLDRAFT_218172 [Branchiostoma floridae]
 gi|229274530|gb|EEN45364.1| hypothetical protein BRAFLDRAFT_218172 [Branchiostoma floridae]
          Length = 343

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 68/222 (30%), Positives = 121/222 (54%), Gaps = 7/222 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L + +NNLS FP    K   LR L +++N++T +P  + + P L  L  RNN L+ 
Sbjct: 50  NLEVLDVSNNNLSTFPPGVEKLQKLRELHINDNQLTEVPSGVCSLPNLEVLNVRNNKLS- 108

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            + P  +  L+ L+   +  NQL + P  +  +P L+ L + NN+L+  P  + KL KL 
Sbjct: 109 -TFPPGVEKLQKLRDLGIHDNQLTEVPPGVCSLPNLEALNVSNNNLSTFPPGVEKLQKLT 167

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L + GN LT++P     L  LE L + +N+L + P  +  L+ L+ L +++N+L  +P+
Sbjct: 168 KLGIYGNQLTEVPSGVCSLPNLELLRVDNNKLSTFPPGVEKLQKLRELHINSNQLTEVPS 227

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRD 277
            +++L       + L +  N +R LP+++  L  +  L + D
Sbjct: 228 GVLSLP----NHEVLNVAKNPIRRLPSDVTRLARVKTLGIND 265



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 116/225 (51%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L + +N LS FP    K   LR L + +N++T +P  + + P L  L   NN L+ 
Sbjct: 96  NLEVLNVRNNKLSTFPPGVEKLQKLRDLGIHDNQLTEVPPGVCSLPNLEALNVSNNNLS- 154

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            + P  +  L+ L    + GNQL + P  +  +P L+ L + NN L+  P  + KL KL 
Sbjct: 155 -TFPPGVEKLQKLTKLGIYGNQLTEVPSGVCSLPNLELLRVDNNKLSTFPPGVEKLQKLR 213

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L +  N LT++P     L   E L ++ N +  LP+ ++ L  +K+L +++ +    P 
Sbjct: 214 ELHINSNQLTEVPSGVLSLPNHEVLNVAKNPIRRLPSDVTRLARVKTLGINDCQFDEFPR 273

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +++ LK L EKL +      K   +P E+  L+ L +L +  NPL
Sbjct: 274 QVLQLKTL-EKLYA---GGCKFDIVPDEVGNLQHLWDLDVSGNPL 314



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 71/235 (30%), Positives = 120/235 (51%), Gaps = 8/235 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           + +  L +Y N L+  P       NL  LD+SNN ++  P  +     L  L   +N LT
Sbjct: 26  QKLSRLYIYGNQLTEVPPGVCSLPNLEVLDVSNNNLSTFPPGVEKLQKLRELHINDNQLT 85

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P  + +L NL+V N+  N+L  FP  +  +  L+ L + +N L  VP  +  L  L
Sbjct: 86  --EVPSGVCSLPNLEVLNVRNNKLSTFPPGVEKLQKLRDLGIHDNQLTEVPPGVCSLPNL 143

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L++  N+L+  P     L +L  L +  NQL  +P+ + +L  L+ L + NNKL T P
Sbjct: 144 EALNVSNNNLSTFPPGVEKLQKLTKLGIYGNQLTEVPSGVCSLPNLELLRVDNNKLSTFP 203

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMT 289
             +  L    +KL+ L +++N+L  +P+ +++L     L++  NP + R  SD+T
Sbjct: 204 PGVEKL----QKLRELHINSNQLTEVPSGVLSLPNHEVLNVAKNP-IRRLPSDVT 253



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/203 (29%), Positives = 100/203 (49%), Gaps = 28/203 (13%)

Query: 78  FTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
            T+L  L++S N++T +P+AI                          L+ L    + GNQ
Sbjct: 2   ITDLEFLNVSKNKLTSIPEAI------------------------GRLQKLSRLYIYGNQ 37

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           L + P  +  +P L+ L + NN+L+  P  + KL KL  L +  N LT++P     L  L
Sbjct: 38  LTEVPPGVCSLPNLEVLDVSNNNLSTFPPGVEKLQKLRELHINDNQLTEVPSGVCSLPNL 97

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
           E L + +N+L + P  +  L+ L+ L +H+N+L  +P  + +L      L++L + NN L
Sbjct: 98  EVLNVRNNKLSTFPPGVEKLQKLRDLGIHDNQLTEVPPGVCSLP----NLEALNVSNNNL 153

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
            T P  +  L+ L++L +  N L
Sbjct: 154 STFPPGVEKLQKLTKLGIYGNQL 176



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 83/155 (53%), Gaps = 4/155 (2%)

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           ++ +L+  N+S N+L   P  I  +  L  LY+  N L  VP  +  L  L VL +  N+
Sbjct: 1   DITDLEFLNVSKNKLTSIPEAIGRLQKLSRLYIYGNQLTEVPPGVCSLPNLEVLDVSNNN 60

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           L+  P     L +L  L ++DNQL  +P+ + +L  L+ L + NNKL T P  +  L   
Sbjct: 61  LSTFPPGVEKLQKLRELHINDNQLTEVPSGVCSLPNLEVLNVRNNKLSTFPPGVEKL--- 117

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            +KL+ L +H+N+L  +P  + +L  L  L++ +N
Sbjct: 118 -QKLRDLGIHDNQLTEVPPGVCSLPNLEALNVSNN 151



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 43/134 (32%), Positives = 72/134 (53%), Gaps = 5/134 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTL--IARNNLLT 114
           N++ L + +N LS FP    K   LR L +++N++T +P  + + P   +  +A+N +  
Sbjct: 188 NLELLRVDNNKLSTFPPGVEKLQKLRELHINSNQLTEVPSGVLSLPNHEVLNVAKNPI-- 245

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP D++ L  +K   ++  Q ++FP Q+L + TL+ LY G    + VP E+  L  L
Sbjct: 246 -RRLPSDVTRLARVKTLGINDCQFDEFPRQVLQLKTLEKLYAGGCKFDIVPDEVGNLQHL 304

Query: 175 HVLSLGGNSLTDIP 188
             L + GN LT  P
Sbjct: 305 WDLDVSGNPLTYPP 318



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 81/182 (44%), Gaps = 26/182 (14%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L + +NNLS FP    K   L  L +  N++T +P  + + P L  L   NN L+ 
Sbjct: 142 NLEALNVSNNNLSTFPPGVEKLQKLTKLGIYGNQLTEVPSGVCSLPNLELLRVDNNKLS- 200

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            + P  +  L+ L+  +++ NQL + P  +L +P  + L +  N +  +P ++ +L ++ 
Sbjct: 201 -TFPPGVEKLQKLRELHINSNQLTEVPSGVLSLPNHEVLNVAKNPIRRLPSDVTRLARVK 259

Query: 176 VLSL-----------------------GGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            L +                       GG     +PD  G+L  L  L +S N L   P 
Sbjct: 260 TLGINDCQFDEFPRQVLQLKTLEKLYAGGCKFDIVPDEVGNLQHLWDLDVSGNPLTYPPQ 319

Query: 213 SI 214
            +
Sbjct: 320 DV 321


>gi|45658593|ref|YP_002679.1| hypothetical protein [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|418694153|ref|ZP_13255197.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|418713547|ref|ZP_13274273.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|421085480|ref|ZP_15546333.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421103545|ref|ZP_15564142.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|45601837|gb|AAS71316.1| cytoplasmic membrane protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
 gi|409958164|gb|EKO17061.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|410366508|gb|EKP21899.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410432116|gb|EKP76474.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|410790022|gb|EKR83717.1| leucine rich repeat protein [Leptospira interrogans str. UI 08452]
 gi|456986299|gb|EMG21899.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 423

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 96/244 (39%), Positives = 129/244 (52%), Gaps = 16/244 (6%)

Query: 38  TLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQA 97
           +L T+IE L      K  +N+D   L HN  +           L +LDL +N++  +P+ 
Sbjct: 170 SLPTEIEQL------KSLKNLD---LNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKE 220

Query: 98  ITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL 156
           I     L  L+   N LT  SLPK++  L+NLK  NL  N+ + FP++IL++  L  L L
Sbjct: 221 IRQLKSLKVLMLTGNQLT--SLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNL 278

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
             N L   P+E+ +L  L  LSL  N +T +P     L  L+ L LS N++  LP  I  
Sbjct: 279 YYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQ 338

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           LK L+ L L NNKL  LP EI  LK    KL+ L L NN+L TLP EI  LK L  L L 
Sbjct: 339 LKNLEWLSLSNNKLNALPKEIGQLK----KLQRLELGNNQLTTLPKEIEQLKNLQRLELD 394

Query: 277 DNPL 280
            NP+
Sbjct: 395 SNPI 398



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 118/229 (51%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L L    L   P+   +  NL+ LDL  N  T L + I     L  L   NN L
Sbjct: 40  PADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKL 99

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++  L+NL+  +L  N+L   P +I     L+ L L NN L  +P+EI +L  
Sbjct: 100 TV--LPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQN 157

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  LSL  N L  +P     L  L+ L L+ N+  ++   +  L+ L++L L +NKL+T+
Sbjct: 158 LQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTI 217

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK     LK L+L  N+L +LP EI  L+ L  L+L +N   I
Sbjct: 218 PKEIRQLKS----LKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQI 262



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 123/247 (49%), Gaps = 22/247 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +++  L L +N L+  P    +  NL+ L L +N + +LP+ I  F  L  L   NN LT
Sbjct: 87  KDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLT 146

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+  +L  N+L   P +I  + +LK L L +N    V +E+  L  L
Sbjct: 147 V--LPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETL 204

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  IP     L  L+ L+L+ NQL SLP  I  L+ LK+L L  N+ +  P
Sbjct: 205 ENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFP 264

Query: 235 TEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            EI+ LK L                    + LK L L++N++ TLP E+  L  L EL L
Sbjct: 265 VEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHL 324

Query: 276 RDNPLVI 282
             N + I
Sbjct: 325 SGNKITI 331



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/163 (39%), Positives = 87/163 (53%), Gaps = 4/163 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++L K + N  +++  +LS   L+  P +I  +  L+ L LG N    + +EI +L  L 
Sbjct: 31  KNLAKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQ 90

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L+L  N LT +P   G L  L+ L L  N+L +LP  I   K L+ L L NNKL  LP 
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPK 150

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           EI  L+ L E    L L +NKL +LPTEI  LK L  L L  N
Sbjct: 151 EIGQLQNLQE----LSLLSNKLISLPTEIEQLKSLKNLDLNHN 189



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 3/123 (2%)

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDM 122
           Y+N L  FP    +  +L+ L L +N+IT LP  +T  P L  L    N +T   LPK++
Sbjct: 279 YYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITI--LPKEI 336

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             LKNL+  +LS N+L   P +I  +  L+ L LGNN L  +P+EI +L  L  L L  N
Sbjct: 337 LQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSN 396

Query: 183 SLT 185
            ++
Sbjct: 397 PIS 399



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 5/113 (4%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           LYHN ++  P   ++  +L+ L LS N+IT LP+ I     L  L   NN L A  LPK+
Sbjct: 301 LYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNA--LPKE 358

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           +  LK L+   L  NQL   P +I  +  L+ L L +N ++  P+E  ++ KL
Sbjct: 359 IGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS--PKEKERIRKL 409


>gi|195451908|ref|XP_002073128.1| GK13318 [Drosophila willistoni]
 gi|194169213|gb|EDW84114.1| GK13318 [Drosophila willistoni]
          Length = 1874

 Score =  108 bits (271), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 85/251 (33%), Positives = 126/251 (50%), Gaps = 15/251 (5%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           +++L L  N L   P+  S+ T L+ LDL +N I  LP  +   P L  L   +N L  +
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQL--Q 211

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            LP ++  L  L   ++S N+LE+ P +I  + +L  L L  N L  +P  I KL +L +
Sbjct: 212 RLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDGIAKLSRLTI 271

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L  + DT G    ++ LIL++N L  LPASI  +  L +L +  N L  LP E
Sbjct: 272 LKLDQNRLQRLNDTLGSCENMQELILTENFLSELPASIGRMTKLSNLNVDRNALEYLPLE 331

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
           I   +C +  L  L L +NKL+ LP E+     L  L +  N L+        Y P SL+
Sbjct: 332 I--GQCAN--LGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLL--------YLPYSLV 379

Query: 297 ELASRTLKVHE 307
            L  + + + E
Sbjct: 380 NLQLKAVWLSE 390



 Score =  107 bits (266), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 75/225 (33%), Positives = 115/225 (51%), Gaps = 9/225 (4%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTA 115
           ++ L L  N++   P N  +   LR L LS+N I  LP  I NF   +   ++RN++   
Sbjct: 39  LEELFLDANHIRDLPKNFFRLQRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDI--- 95

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P D+ +L++L+V + S N + + P     +  L  L L + SL  +P +   L +L 
Sbjct: 96  PDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLE 155

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L  +P+T   L +L+ L L DN++E LP  +  L  L  L L +N+L+ LP 
Sbjct: 156 SLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPP 215

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           E+  L     KL  L +  N+L  LP EI  L  L++L L  N L
Sbjct: 216 ELGLLT----KLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLL 256



 Score =  104 bits (260), Expect = 7e-20,   Method: Composition-based stats.
 Identities = 84/241 (34%), Positives = 110/241 (45%), Gaps = 7/241 (2%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A  I  LP N +  + + +  L L  N +   P +   F NL  LD+S N I  +P  I 
Sbjct: 46  ANHIRDLPKNFF--RLQRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIPDIPDDIK 103

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
           +   S  +A  +      LP   S LKNL V  L+   L   P     +  L+ L L  N
Sbjct: 104 HLQ-SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELREN 162

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L H+P  I++L KL  L LG N + D+P   G L  L  L L  NQL+ LP  +  L  
Sbjct: 163 LLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTK 222

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L  L +  N+L  LP EI  L  L++    L L  N L TLP  I  L  L+ L L  N 
Sbjct: 223 LTYLDVSENRLEELPNEISGLVSLTD----LDLAQNLLETLPDGIAKLSRLTILKLDQNR 278

Query: 280 L 280
           L
Sbjct: 279 L 279



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 90/199 (45%), Gaps = 27/199 (13%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L HN L   P      T L  LD+S NR+  LP  I+    L+ L    NLL  E+LP
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLL--ETLP 260

Query: 120 KDMSNLKNLKVFNLSGNQLE-----------------------QFPIQILDIPTLKYLYL 156
             ++ L  L +  L  N+L+                       + P  I  +  L  L +
Sbjct: 261 DGIAKLSRLTILKLDQNRLQRLNDTLGSCENMQELILTENFLSELPASIGRMTKLSNLNV 320

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
             N+L ++P EI +   L VLSL  N L  +P   G+   L  L +S NQL  LP S+ N
Sbjct: 321 DRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLHVLDVSGNQLLYLPYSLVN 380

Query: 217 LKMLKSLLLHNNKLRTLPT 235
           L+ LK++ L  N+ + L T
Sbjct: 381 LQ-LKAVWLSENQSQPLLT 398



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 49/155 (31%), Positives = 71/155 (45%), Gaps = 4/155 (2%)

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           + L+   L  N +   P     +  L+ L L +N +  +P +I     L  L +  N + 
Sbjct: 37  RTLEELFLDANHIRDLPKNFFRLQRLRKLGLSDNEIGRLPPDIQNFENLVELDVSRNDIP 96

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           DIPD    L  L+    S N +  LP+  S LK L  L L++  L TLP +  +L     
Sbjct: 97  DIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLT---- 152

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +L+SL L  N L+ LP  I  L  L  L L DN +
Sbjct: 153 QLESLELRENLLKHLPETISQLTKLKRLDLGDNEI 187



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Composition-based stats.
 Identities = 50/155 (32%), Positives = 75/155 (48%), Gaps = 4/155 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           ++  L L  N L   PD  +K + L  L L  NR+  L   + +   +  LI   N L+ 
Sbjct: 245 SLTDLDLAQNLLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGSCENMQELILTENFLS- 303

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP  +  +  L   N+  N LE  P++I     L  L L +N L  +P E+     LH
Sbjct: 304 -ELPASIGRMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKKLPPELGNCTVLH 362

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           VL + GN L  +P +  +L QL+A+ LS+NQ + L
Sbjct: 363 VLDVSGNQLLYLPYSLVNL-QLKAVWLSENQSQPL 396



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 4/112 (3%)

Query: 49  NDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLI 107
           ND     EN+  L+L  N LS  P +  + T L +L++  N + +LP  I     L  L 
Sbjct: 283 NDTLGSCENMQELILTENFLSELPASIGRMTKLSNLNVDRNALEYLPLEIGQCANLGVLS 342

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
            R+N L  + LP ++ N   L V ++SGNQL   P  ++++  LK ++L  N
Sbjct: 343 LRDNKL--KKLPPELGNCTVLHVLDVSGNQLLYLPYSLVNL-QLKAVWLSEN 391


>gi|319954347|ref|YP_004165614.1| adenylate cyclase [Cellulophaga algicola DSM 14237]
 gi|319423007|gb|ADV50116.1| Adenylate cyclase [Cellulophaga algicola DSM 14237]
          Length = 606

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 148/313 (47%), Gaps = 42/313 (13%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           PE I+ L L   NL+  P +     +L++LD+SNN +T LP+ I N   L  L+A  N L
Sbjct: 34  PERIEYLDLSSKNLTEIPSSIGALIHLKTLDISNNLLTQLPEEIGNLKHLEKLVANKNKL 93

Query: 114 TA---------------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
           T                       +LPK +  L  L+   L  N+L   P    ++  LK
Sbjct: 94  TQLPEFILNLKELKDLRLDKNQISTLPKKIDKLAKLEKLTLRDNRLSVLPKSFYNLLNLK 153

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            L L +N++  + ++I+KL  L VL L  N L ++P+  G+L  LE L L+  +L SLP 
Sbjct: 154 ELDLTSNTITQISKDISKLQSLTVLQLQFNPLKELPEKVGNLASLETLWLNKTELSSLPH 213

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSE 272
           SI  L  LK L    N L+++P  I  LK     L+SL L  N + +LP +I  L  L  
Sbjct: 214 SIGKLSNLKDLSAGYNHLKSIPATITALK----NLESLSLEKNLISSLPADIGNLTKLKR 269

Query: 273 LSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVN- 331
           L+L  N L        T  P SL  L    L + E D ++  LP+ ++     A  C + 
Sbjct: 270 LNLNTNKL--------TSIPASLGNLKLSALYLKENDITE--LPEAVI-----AMGCYDV 314

Query: 332 PKCKGVFFDNRIE 344
            K   V++ +R E
Sbjct: 315 EKDPQVYYPSRAE 327



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 81/164 (49%), Gaps = 4/164 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           SL + +   + ++  +LS   L + P  I  +  LK L + NN L  +P EI  L  L  
Sbjct: 26  SLEEALQTPERIEYLDLSSKNLTEIPSSIGALIHLKTLDISNNLLTQLPEEIGNLKHLEK 85

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L    N LT +P+   +L +L+ L L  NQ+ +LP  I  L  L+ L L +N+L  LP  
Sbjct: 86  LVANKNKLTQLPEFILNLKELKDLRLDKNQISTLPKKIDKLAKLEKLTLRDNRLSVLPKS 145

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
              L  L E    L L +N +  +  +I  L+ L+ L L+ NPL
Sbjct: 146 FYNLLNLKE----LDLTSNTITQISKDISKLQSLTVLQLQFNPL 185


>gi|418710297|ref|ZP_13271068.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410769233|gb|EKR44475.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 423

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 96/244 (39%), Positives = 129/244 (52%), Gaps = 16/244 (6%)

Query: 38  TLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQA 97
           +L T+IE L      K  +N+D   L HN  +           L +LDL +N++  +P+ 
Sbjct: 170 SLPTEIEQL------KSLKNLD---LNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKE 220

Query: 98  ITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL 156
           I     L  L+   N LT  SLPK++  L+NLK  NL  N+ + FP++IL++  L  L L
Sbjct: 221 IRQLKSLKVLMLTGNQLT--SLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNL 278

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
             N L   P+E+ +L  L  LSL  N +T +P     L  L+ L LS N++  LP  I  
Sbjct: 279 YYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQ 338

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           LK L+ L L NNKL  LP EI  LK    KL+ L L NN+L TLP EI  LK L  L L 
Sbjct: 339 LKNLEWLSLSNNKLNALPKEIGQLK----KLQRLELGNNQLTTLPKEIEQLKNLQRLELD 394

Query: 277 DNPL 280
            NP+
Sbjct: 395 SNPI 398



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 118/229 (51%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L L    L   P+   +  NL+ LDL  N  T L + I     L  L   NN L
Sbjct: 40  PADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKL 99

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++  L+NL+  +L  N+L   P +I     L+ L L NN L  +P+EI +L  
Sbjct: 100 TV--LPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQN 157

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  LSL  N L  +P     L  L+ L L+ N+  ++   +  L+ L++L L +NKL+T+
Sbjct: 158 LQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTI 217

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK     LK L+L  N+L +LP EI  L+ L  L+L +N   I
Sbjct: 218 PKEIRQLKS----LKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQI 262



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 123/247 (49%), Gaps = 22/247 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +++  L L +N L+  P    +  NL+ L L +N + +LP+ I  F  L  L   NN LT
Sbjct: 87  KDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLT 146

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+  +L  N+L   P +I  + +LK L L +N    V +E+  L  L
Sbjct: 147 V--LPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETL 204

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  IP     L  L+ L+L+ NQL SLP  I  L+ LK+L L  N+ +  P
Sbjct: 205 ENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFP 264

Query: 235 TEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            EI+ LK L                    + LK L L++N++ TLP E+  L  L EL L
Sbjct: 265 VEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHL 324

Query: 276 RDNPLVI 282
             N + I
Sbjct: 325 SGNKITI 331



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 64/163 (39%), Positives = 87/163 (53%), Gaps = 4/163 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++L K + N  +++  +LS   L+  P +I  +  L+ L LG N    + +EI +L  L 
Sbjct: 31  KNLEKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQ 90

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L+L  N LT +P   G L  L+ L L  N+L +LP  I   K L+ L L NNKL  LP 
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPK 150

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           EI  L+ L E    L L +NKL +LPTEI  LK L  L L  N
Sbjct: 151 EIGQLQNLQE----LSLLSNKLISLPTEIEQLKSLKNLDLNHN 189



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 3/123 (2%)

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDM 122
           Y+N L  FP    +  +L+ L L +N+IT LP  +T  P L  L    N +T   LPK++
Sbjct: 279 YYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITI--LPKEI 336

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             LKNL+  +LS N+L   P +I  +  L+ L LGNN L  +P+EI +L  L  L L  N
Sbjct: 337 LQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSN 396

Query: 183 SLT 185
            ++
Sbjct: 397 PIS 399



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/126 (33%), Positives = 64/126 (50%), Gaps = 11/126 (8%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           LYHN ++  P   ++  +L+ L LS N+IT LP+ I     L  L   NN L A  LPK+
Sbjct: 301 LYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNA--LPKE 358

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL------CKLH 175
           +  LK L+   L  NQL   P +I  +  L+ L L +N ++  P+E  ++      C++ 
Sbjct: 359 IGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS--PKEKERIRTLLPKCEID 416

Query: 176 VLSLGG 181
               GG
Sbjct: 417 FEGGGG 422


>gi|298250400|ref|ZP_06974204.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
 gi|297548404|gb|EFH82271.1| leucine-rich repeat protein [Ktedonobacter racemifer DSM 44963]
          Length = 384

 Score =  108 bits (271), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 87/254 (34%), Positives = 125/254 (49%), Gaps = 36/254 (14%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E +  L L  N ++  P    K  NLR+L +  NR++ LP ++ + P L TL    N LT
Sbjct: 52  EQLQELYLDDNQITTLPHVLGKLVNLRALHVDMNRLSVLPSSLYHLPRLETLRLYKNRLT 111

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP D+  L+ L+ F++  NQL   P  + ++  L+ L L  N L+ +   I +L +L
Sbjct: 112 --NLPADIGRLQGLRDFSVGKNQLTSLPESLWELGRLQALNLAENQLSSLSERIGQLTQL 169

Query: 175 HVLSLGGNSLTDIPDTFGD-------------------------LYQLEALILSDNQLES 209
            +L  G N LT +P++ G                          L QL  L ++DNQL  
Sbjct: 170 QMLDAGHNQLTTLPESLGQLTNLTHYLYLSNNRLTTLSESLFAHLTQLAYLNITDNQLTE 229

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLH--NNKLRTLPTEIITL 267
           LP S+  L  LK L ++NN+L TLP E+  L  L E      LH  NN+L TLP  +  L
Sbjct: 230 LPRSLGCLTNLKELRIYNNQLATLPEELGNLAALRE------LHAMNNRLETLPDSLGKL 283

Query: 268 KCLSELSLRDNPLV 281
           K L EL L +N L 
Sbjct: 284 KQLRELRLANNRLA 297



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/218 (35%), Positives = 113/218 (51%), Gaps = 11/218 (5%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI---TNFPLSTLIARNNLLT-AESL 118
           L  N LS   +   + T L+ LD  +N++T LP+++   TN      ++ N L T +ESL
Sbjct: 151 LAENQLSSLSERIGQLTQLQMLDAGHNQLTTLPESLGQLTNLTHYLYLSNNRLTTLSESL 210

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
               ++L  L   N++ NQL + P  +  +  LK L + NN L  +P E+  L  L  L 
Sbjct: 211 ---FAHLTQLAYLNITDNQLTELPRSLGCLTNLKELRIYNNQLATLPEELGNLAALRELH 267

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
              N L  +PD+ G L QL  L L++N+L  LP  +  L  L SL L NN L +LP  + 
Sbjct: 268 AMNNRLETLPDSLGKLKQLRELRLANNRLARLPTYLGELANLTSLDLRNNLLASLPASLD 327

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
            L     KL++L L  N+L TLP  +  L+ L +L LR
Sbjct: 328 NLA----KLRALDLRANRLTTLPPGLQRLQHLEKLDLR 361



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 77/203 (37%), Positives = 110/203 (54%), Gaps = 9/203 (4%)

Query: 65  HNNLSFFPDNASKFTNLRS-LDLSNNRITHLPQAITNF--PLSTLIARNNLLTAESLPKD 121
           HN L+  P++  + TNL   L LSNNR+T L +++      L+ L   +N LT   LP+ 
Sbjct: 176 HNQLTTLPESLGQLTNLTHYLYLSNNRLTTLSESLFAHLTQLAYLNITDNQLT--ELPRS 233

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L NLK   +  NQL   P ++ ++  L+ L+  NN L  +P  + KL +L  L L  
Sbjct: 234 LGCLTNLKELRIYNNQLATLPEELGNLAALRELHAMNNRLETLPDSLGKLKQLRELRLAN 293

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P   G+L  L +L L +N L SLPAS+ NL  L++L L  N+L TLP  +  L+
Sbjct: 294 NRLARLPTYLGELANLTSLDLRNNLLASLPASLDNLAKLRALDLRANRLTTLPPGLQRLQ 353

Query: 242 CLSEKLKSLLLHNNKLRTLPTEI 264
            L EKL    L   KL  LPT +
Sbjct: 354 HL-EKLD---LRWLKLSPLPTWL 372



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 71/202 (35%), Positives = 110/202 (54%), Gaps = 7/202 (3%)

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           R LDL+ NR+T LP+ + +   L  L   +N +T  +LP  +  L NL+  ++  N+L  
Sbjct: 32  RVLDLTGNRLTALPEELGSLEQLQELYLDDNQIT--TLPHVLGKLVNLRALHVDMNRLSV 89

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P  +  +P L+ L L  N L ++P +I +L  L   S+G N LT +P++  +L +L+AL
Sbjct: 90  LPSSLYHLPRLETLRLYKNRLTNLPADIGRLQGLRDFSVGKNQLTSLPESLWELGRLQAL 149

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L++NQL SL   I  L  L+ L   +N+L TLP  +  L  L+  L    L NN+L TL
Sbjct: 150 NLAENQLSSLSERIGQLTQLQMLDAGHNQLTTLPESLGQLTNLTHYLY---LSNNRLTTL 206

Query: 261 PTEIIT-LKCLSELSLRDNPLV 281
              +   L  L+ L++ DN L 
Sbjct: 207 SESLFAHLTQLAYLNITDNQLT 228



 Score = 71.2 bits (173), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 77/154 (50%), Gaps = 3/154 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L+  P +    TNL+ L + NN++  LP+ + N   L  L A NN L  E+LP  +  
Sbjct: 225 NQLTELPRSLGCLTNLKELRIYNNQLATLPEELGNLAALRELHAMNNRL--ETLPDSLGK 282

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           LK L+   L+ N+L + P  + ++  L  L L NN L  +P  ++ L KL  L L  N L
Sbjct: 283 LKQLRELRLANNRLARLPTYLGELANLTSLDLRNNLLASLPASLDNLAKLRALDLRANRL 342

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           T +P     L  LE L L   +L  LP  +  L+
Sbjct: 343 TTLPPGLQRLQHLEKLDLRWLKLSPLPTWLDQLE 376


>gi|395534350|ref|XP_003769205.1| PREDICTED: leucine-rich repeat-containing protein 1 [Sarcophilus
           harrisii]
          Length = 524

 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 116/209 (55%), Gaps = 7/209 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ P++ ++   L+ LDL NN I HLP+ I     L  L    N L  
Sbjct: 152 NLASLELRENLLTYLPESLTQLQRLKELDLGNNEIYHLPETIGALLHLEDLWLDGNQLA- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L + +N L+ +P  I KL KL 
Sbjct: 211 -ELPQEIGNLKNLLCLDVSENKLERLPEEISGLASLTDLVISHNLLDVLPDGIGKLKKLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L    N L  + +  G+   L  L+L++NQL +LP SI  LK L +L    NKL +LP 
Sbjct: 270 ILKTDQNRLVQLTEAIGECESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPK 329

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           EI    C S  L    + +N+L  +P+E+
Sbjct: 330 EIG--GCCS--LTVFSVRDNRLTRIPSEV 354



 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 87/261 (33%), Positives = 125/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N++   P++ S    L+  D S N +T LP++  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQRADFSGNPLTRLPESFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  LK L LGNN
Sbjct: 126 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPESLTQLQRLKELDLGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + H+P  I  L  L  L L GN L ++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 185 EIYHLPETIGALLHLEDLWLDGNQLAELPQEIGNLKNLLCLDVSENKLERLPEEISGLAS 244

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTL 260
           L  L++ +N L  LP  I  LK LS                   E L  L+L  N+L TL
Sbjct: 245 LTDLVISHNLLDVLPDGIGKLKKLSILKTDQNRLVQLTEAIGECESLTELVLTENQLLTL 304

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK LS L+   N LV
Sbjct: 305 PKSIGKLKKLSNLNADRNKLV 325



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 104/224 (46%), Gaps = 14/224 (6%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN+    PE I  LL      L  N L+  P       NL  LD+S N++  LP+ I+
Sbjct: 181 LGNNEIYHLPETIGALLHLEDLWLDGNQLAELPQEIGNLKNLLCLDVSENKLERLPEEIS 240

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L+ L+  +NLL  + LP  +  LK L +     N+L Q    I +  +L  L L  
Sbjct: 241 GLASLTDLVISHNLL--DVLPDGIGKLKKLSILKTDQNRLVQLTEAIGECESLTELVLTE 298

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P+ I KL KL  L+   N L  +P   G    L    + DN+L  +P+ +S   
Sbjct: 299 NQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFSVRDNRLTRIPSEVSQAS 358

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
            L  L +  N+L  LP  +  L     KLK+L L +N+ + L T
Sbjct: 359 ELHVLDVAGNRLLHLPLSLTNL-----KLKALWLSDNQSQPLLT 397



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 100/204 (49%), Gaps = 8/204 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNF--PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ ++D  +  + ++P+ I  +   L  L+   N L    LP+    L  L+   LS N+
Sbjct: 13  HVETIDKRHCSLVYVPEEIYRYTRSLEELLLDANQL--RELPEQFFQLVKLRKLGLSDNE 70

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           +++ P +I +   L  L +  N +  +P  I+    L      GN LT +P++F +L  L
Sbjct: 71  IQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQRADFSGNPLTRLPESFPELQNL 130

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
             L ++D  L+SLP +I NL  L SL L  N L  LP  +  L    ++LK L L NN++
Sbjct: 131 TCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPESLTQL----QRLKELDLGNNEI 186

Query: 258 RTLPTEIITLKCLSELSLRDNPLV 281
             LP  I  L  L +L L  N L 
Sbjct: 187 YHLPETIGALLHLEDLWLDGNQLA 210


>gi|320103236|ref|YP_004178827.1| adenylate cyclase [Isosphaera pallida ATCC 43644]
 gi|319750518|gb|ADV62278.1| Adenylate cyclase [Isosphaera pallida ATCC 43644]
          Length = 278

 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 89/243 (36%), Positives = 123/243 (50%), Gaps = 22/243 (9%)

Query: 83  SLDLSNNRITHLPQAITN-FPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           SLDL  NR++ +P  I     L+ LI R N L    LP +++ L  L   +LS NQL Q 
Sbjct: 20  SLDLGRNRLSRIPAEIGRCVKLTRLILRGNRLA--ELPSELAKLTKLSELDLSSNQLTQL 77

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P  +  +  L  L L +N L  +P E  +L KL  L+L GN L  +P   G L +L  L 
Sbjct: 78  PAVVTRLHGLTVLDLHSNRLTQLPAEFGQLTKLIRLNLQGNQLRRLPAEIGKLTKLMELN 137

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           L  N+LE+LP  I  L  +  L L  N+LR+LP EI  +  L      L L+NN+L +LP
Sbjct: 138 LHHNKLEALPPEIGKLTAVVKLYLRQNRLRSLPPEIGKMVALC----WLNLYNNELTSLP 193

Query: 262 TEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQ---EHLPQN 318
            EI  L+ L +L+L  N         +T  PP + +L     ++  +D S    EHLP  
Sbjct: 194 PEIGKLRQLVKLNLAAN--------RLTTLPPEIGQLT----RLGTLDLSHNPLEHLPPQ 241

Query: 319 LVQ 321
           L Q
Sbjct: 242 LSQ 244



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 87/239 (36%), Positives = 112/239 (46%), Gaps = 15/239 (6%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L  N LS  P    +   L  L L  NR+  LP  +     LS L   +N LT   LP  
Sbjct: 23  LGRNRLSRIPAEIGRCVKLTRLILRGNRLAELPSELAKLTKLSELDLSSNQLT--QLPAV 80

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           ++ L  L V +L  N+L Q P +   +  L  L L  N L  +P EI KL KL  L+L  
Sbjct: 81  VTRLHGLTVLDLHSNRLTQLPAEFGQLTKLIRLNLQGNQLRRLPAEIGKLTKLMELNLHH 140

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P   G L  +  L L  N+L SLP  I  +  L  L L+NN+L +LP EI  L+
Sbjct: 141 NKLEALPPEIGKLTAVVKLYLRQNRLRSLPPEIGKMVALCWLNLYNNELTSLPPEIGKLR 200

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELAS 300
               +L  L L  N+L TLP EI  L  L  L L  NPL         + PP L +L+ 
Sbjct: 201 ----QLVKLNLAANRLTTLPPEIGQLTRLGTLDLSHNPL--------EHLPPQLSQLSG 247



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 81/262 (30%), Positives = 117/262 (44%), Gaps = 39/262 (14%)

Query: 14  SDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDT------LLLYHNN 67
           +D+D+ K + ++      +SLD          L  N  ++ P  I        L+L  N 
Sbjct: 2   TDADALKLI-LRAESLGSTSLD----------LGRNRLSRIPAEIGRCVKLTRLILRGNR 50

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA----------- 115
           L+  P   +K T L  LDLS+N++T LP  +T    L+ L   +N LT            
Sbjct: 51  LAELPSELAKLTKLSELDLSSNQLTQLPAVVTRLHGLTVLDLHSNRLTQLPAEFGQLTKL 110

Query: 116 ----------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                       LP ++  L  L   NL  N+LE  P +I  +  +  LYL  N L  +P
Sbjct: 111 IRLNLQGNQLRRLPAEIGKLTKLMELNLHHNKLEALPPEIGKLTAVVKLYLRQNRLRSLP 170

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
            EI K+  L  L+L  N LT +P   G L QL  L L+ N+L +LP  I  L  L +L L
Sbjct: 171 PEIGKMVALCWLNLYNNELTSLPPEIGKLRQLVKLNLAANRLTTLPPEIGQLTRLGTLDL 230

Query: 226 HNNKLRTLPTEIITLKCLSEKL 247
            +N L  LP ++  L  L + L
Sbjct: 231 SHNPLEHLPPQLSQLSGLRQIL 252



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 9/159 (5%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L  N   + P  I  L       L+HN L   P    K T +  L L  NR+  LP  I 
Sbjct: 115 LQGNQLRRLPAEIGKLTKLMELNLHHNKLEALPPEIGKLTAVVKLYLRQNRLRSLPPEIG 174

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L  L   NN LT  SLP ++  L+ L   NL+ N+L   P +I  +  L  L L +
Sbjct: 175 KMVALCWLNLYNNELT--SLPPEIGKLRQLVKLNLAANRLTTLPPEIGQLTRLGTLDLSH 232

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           N L H+P ++++L  L  +   G     +P +  +L ++
Sbjct: 233 NPLEHLPPQLSQLSGLRQILADGLDPAILPGSLSELVRV 271


>gi|254410565|ref|ZP_05024344.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
 gi|196182771|gb|EDX77756.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1117

 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 76/232 (32%), Positives = 124/232 (53%), Gaps = 13/232 (5%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L  N ++  P+  S+ TNL++L L +N+IT +P+ I     L  L+   N +T 
Sbjct: 133 NLQLLGLSRNQITEIPECISQLTNLQNLYLHDNKITEIPECIGQLTNLQNLVLIGNQIT- 191

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+ +  L NL+   L+GNQ+ + P  I  +  L+ LY G N +  +P  I +L  L 
Sbjct: 192 -EIPEFIGKLTNLQNLGLTGNQITEIPEFIGKLTNLQLLYFGGNQITEMPECIGQLNNLQ 250

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L+L  N +T++P+  G L  L+ L L  NQ+  +P  I  L  L+ L L +NK+  +P 
Sbjct: 251 ILNLWKNQITEMPECIGQLNNLQILNLWKNQITEIPECIGQLNNLQELDLDDNKITEIP- 309

Query: 236 EIITLKCLSE--KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL--VIR 283
                +C+ +   L+ L L  N++  +P  I  L  L +L L +NPL  V+R
Sbjct: 310 -----ECIGQLINLQELSLTENQITEIPECIGQLTNLQKLILDNNPLNPVVR 356



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 118/244 (48%), Gaps = 22/244 (9%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L++  N ++  P   S+ TNLR L L  N+IT +P+ I     L  L    N +T 
Sbjct: 64  NLKKLIIGKNKITEIPGCISQLTNLRFLGLWENQITEIPEFIGQLTNLKKLSLSANQIT- 122

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +PK +  L NL++  LS NQ+ + P  I  +  L+ LYL +N +  +P  I +L  L 
Sbjct: 123 -EIPKFIGYLNNLQLLGLSRNQITEIPECISQLTNLQNLYLHDNKITEIPECIGQLTNLQ 181

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L GN +T+IP+  G L  L+ L L+ NQ+  +P  I  L  L+ L    N++  +P 
Sbjct: 182 NLVLIGNQITEIPEFIGKLTNLQNLGLTGNQITEIPEFIGKLTNLQLLYFGGNQITEMPE 241

Query: 236 EIITL-----------------KCLSE--KLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
            I  L                 +C+ +   L+ L L  N++  +P  I  L  L EL L 
Sbjct: 242 CIGQLNNLQILNLWKNQITEMPECIGQLNNLQILNLWKNQITEIPECIGQLNNLQELDLD 301

Query: 277 DNPL 280
           DN +
Sbjct: 302 DNKI 305



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 110/226 (48%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E +  L L    ++  P+   + TNL+ LDL  N+IT +P+ I     L  LI   N +T
Sbjct: 17  EGVTELDLSGKGITEIPECIGQLTNLQELDLRENQITEIPECIGQLTNLKKLIIGKNKIT 76

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P  +S L NL+   L  NQ+ + P  I  +  LK L L  N +  +P+ I  L  L
Sbjct: 77  --EIPGCISQLTNLRFLGLWENQITEIPEFIGQLTNLKKLSLSANQITEIPKFIGYLNNL 134

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  N +T+IP+    L  L+ L L DN++  +P  I  L  L++L+L  N++  +P
Sbjct: 135 QLLGLSRNQITEIPECISQLTNLQNLYLHDNKITEIPECIGQLTNLQNLVLIGNQITEIP 194

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             I  L      L++L L  N++  +P  I  L  L  L    N +
Sbjct: 195 EFIGKLT----NLQNLGLTGNQITEIPEFIGKLTNLQLLYFGGNQI 236



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/215 (32%), Positives = 109/215 (50%), Gaps = 13/215 (6%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
            +  LDLS   IT +P+ I     L  L  R N +T   +P+ +  L NLK   +  N++
Sbjct: 18  GVTELDLSGKGITEIPECIGQLTNLQELDLRENQIT--EIPECIGQLTNLKKLIIGKNKI 75

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
            + P  I  +  L++L L  N +  +P  I +L  L  LSL  N +T+IP   G L  L+
Sbjct: 76  TEIPGCISQLTNLRFLGLWENQITEIPEFIGQLTNLKKLSLSANQITEIPKFIGYLNNLQ 135

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE--KLKSLLLHNNK 256
            L LS NQ+  +P  IS L  L++L LH+NK+  +P      +C+ +   L++L+L  N+
Sbjct: 136 LLGLSRNQITEIPECISQLTNLQNLYLHDNKITEIP------ECIGQLTNLQNLVLIGNQ 189

Query: 257 LRTLPTEIITLKCLSELSLRDNPL--VIRFVSDMT 289
           +  +P  I  L  L  L L  N +  +  F+  +T
Sbjct: 190 ITEIPEFIGKLTNLQNLGLTGNQITEIPEFIGKLT 224



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 95/189 (50%), Gaps = 7/189 (3%)

Query: 39  LATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI 98
           +  QI  +P  ++  K  N+  L L  N ++  P+   K TNL+ L    N+IT +P+ I
Sbjct: 186 IGNQITEIP--EFIGKLTNLQNLGLTGNQITEIPEFIGKLTNLQLLYFGGNQITEMPECI 243

Query: 99  TNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
                L  L    N +T   +P+ +  L NL++ NL  NQ+ + P  I  +  L+ L L 
Sbjct: 244 GQLNNLQILNLWKNQIT--EMPECIGQLNNLQILNLWKNQITEIPECIGQLNNLQELDLD 301

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASI--S 215
           +N +  +P  I +L  L  LSL  N +T+IP+  G L  L+ LIL +N L  +  S   S
Sbjct: 302 DNKITEIPECIGQLINLQELSLTENQITEIPECIGQLTNLQKLILDNNPLNPVVRSAYQS 361

Query: 216 NLKMLKSLL 224
            L  LK+ L
Sbjct: 362 GLDELKAYL 370


>gi|45658729|ref|YP_002815.1| hypothetical protein [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|45601973|gb|AAS71452.1| cytoplasmic membrane protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 272

 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 75/191 (39%), Positives = 103/191 (53%), Gaps = 7/191 (3%)

Query: 94  LPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
           LP+ I  F  L  L    N LT  SLPK++  L+ L+V NL+GNQ    P +I  +  L+
Sbjct: 60  LPRVIGLFQNLEKLNLDGNQLT--SLPKEIGQLQKLRVLNLAGNQFTSLPKEIGQLQNLE 117

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            L L  N    +P+EI +L  L VL+L GN LT +P   G L  LE L L+ NQ  SLP 
Sbjct: 118 RLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPK 177

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSE 272
            I  L+ L++L L +N+    P EI       + LK L L  ++L+TLP EI+ L+ L  
Sbjct: 178 EIGQLQKLEALNLDHNRFTIFPKEIRQ----QQSLKWLRLSGDQLKTLPKEILLLQNLQV 233

Query: 273 LSLRDNPLVIR 283
           L L  N   ++
Sbjct: 234 LRLYSNSFSLK 244



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/173 (32%), Positives = 81/173 (46%), Gaps = 24/173 (13%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           + +  L L  N  +  P    +  NL  LDL  N+ T                       
Sbjct: 91  QKLRVLNLAGNQFTSLPKEIGQLQNLERLDLDGNQFT----------------------- 127

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLPK++  L+NL+V NL+GNQL   P +I  +  L+ L L  N    +P+EI +L KL 
Sbjct: 128 -SLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFTSLPKEIGQLQKLE 186

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
            L+L  N  T  P        L+ L LS +QL++LP  I  L+ L+ L L++N
Sbjct: 187 ALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNLQVLRLYSN 239



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 69/134 (51%), Gaps = 4/134 (2%)

Query: 145 ILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD 204
           IL++     + +G + L  +PR I     L  L+L GN LT +P   G L +L  L L+ 
Sbjct: 41  ILEMSMNTRISMGLHELESLPRVIGLFQNLEKLNLDGNQLTSLPKEIGQLQKLRVLNLAG 100

Query: 205 NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           NQ  SLP  I  L+ L+ L L  N+  +LP EI  L    + L+ L L  N+L +LP EI
Sbjct: 101 NQFTSLPKEIGQLQNLERLDLDGNQFTSLPKEIGQL----QNLRVLNLAGNQLTSLPKEI 156

Query: 265 ITLKCLSELSLRDN 278
             L+ L  L L  N
Sbjct: 157 GQLQNLERLDLAGN 170



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 3/131 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N  +  P    +  NLR L+L+ N++T LP+ I     L  L    N  T
Sbjct: 114 QNLERLDLDGNQFTSLPKEIGQLQNLRVLNLAGNQLTSLPKEIGQLQNLERLDLAGNQFT 173

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLPK++  L+ L+  NL  N+   FP +I    +LK+L L  + L  +P+EI  L  L
Sbjct: 174 --SLPKEIGQLQKLEALNLDHNRFTIFPKEIRQQQSLKWLRLSGDQLKTLPKEILLLQNL 231

Query: 175 HVLSLGGNSLT 185
            VL L  NS +
Sbjct: 232 QVLRLYSNSFS 242


>gi|429961278|gb|ELA40823.1| hypothetical protein VICG_02141, partial [Vittaforma corneae ATCC
           50505]
          Length = 235

 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 83/232 (35%), Positives = 124/232 (53%), Gaps = 9/232 (3%)

Query: 51  YNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTL-IA 108
           + + PE+  ++ +  + ++    N  +   L+ L+L +NR+  LP  I   + L  L ++
Sbjct: 8   FEEHPEHETSISMPSHGITSIDSNVKRLVGLQCLNLRSNRLRILPIEIGELWNLQELDLS 67

Query: 109 RNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREI 168
            N L     LP D+  LK+L+   +S N+L   P +I+++  L+ LY   N L  +P EI
Sbjct: 68  WNKL---RQLPADIKRLKSLQRLYISFNKLRVLPCEIVELWNLQELYASYNRLESLPAEI 124

Query: 169 NKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
             L  L  L L  N L  +PD  G+L  ++ L LS N+L SL A I  LK L+ L    N
Sbjct: 125 GNLKNLTKLYLRSNVLRSLPDGIGELISIQGLDLSWNKLRSLSAEIGKLKSLQELYASYN 184

Query: 229 KLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +L +LP EI  LK L++    L L +N LR+LP EI TL  L +L L DN L
Sbjct: 185 RLESLPVEIGNLKNLTK----LFLRSNVLRSLPDEIETLNKLQQLILSDNKL 232



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 74/205 (36%), Positives = 97/205 (47%), Gaps = 30/205 (14%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTA 115
           N+  L L  N L   P +  +  +L+ L +S N++  LP  I   + L  L A  N L  
Sbjct: 60  NLQELDLSWNKLRQLPADIKRLKSLQRLYISFNKLRVLPCEIVELWNLQELYASYNRL-- 117

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ESLP ++ NLKN                       L  LYL +N L  +P  I +L  + 
Sbjct: 118 ESLPAEIGNLKN-----------------------LTKLYLRSNVLRSLPDGIGELISIQ 154

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L  +    G L  L+ L  S N+LESLP  I NLK L  L L +N LR+LP 
Sbjct: 155 GLDLSWNKLRSLSAEIGKLKSLQELYASYNRLESLPVEIGNLKNLTKLFLRSNVLRSLPD 214

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTL 260
           EI TL     KL+ L+L +NKL  L
Sbjct: 215 EIETLN----KLQQLILSDNKLDAL 235


>gi|395541885|ref|XP_003772867.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           homolog [Sarcophilus harrisii]
          Length = 1047

 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 131/277 (47%), Gaps = 36/277 (12%)

Query: 27  LDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           LD S++ L + T A  +  LP          +  L L HN L   P       +L  LD+
Sbjct: 200 LDVSHNRLGAVT-AEVLSALPQ---------LRKLNLSHNQLVDLPAQLGTLGHLEELDV 249

Query: 87  SNNRITHLPQAITNF-PLSTLIARNNLLTA---------------------ESLPKDMSN 124
           S N++  LP+A+ +   L TL   +N LTA                       LP+++  
Sbjct: 250 SFNKLPQLPEALGHLRALRTLDLDHNQLTAFPPQLLQLATLEELDVSGNRLRGLPEEIGT 309

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ LK+  LSG +L   P     + +L+ L L +N L  +P + ++L +L +L+L  N  
Sbjct: 310 LRALKILWLSGAELGTLPSGFCQLASLESLMLDSNGLQALPAQFSRLQQLRMLNLSSNLF 369

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
            D P     L  LE L LS N+L ++PA +S L  L +L L NN++R LP  I+ L  L 
Sbjct: 370 EDFPGALLPLASLEELYLSRNRLTAVPALVSGLSKLLTLWLDNNRIRYLPDSIVELTGLE 429

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           E    L+L  N++  LP     L  +    ++DNPL+
Sbjct: 430 E----LVLQGNQIAVLPDNFGQLSRVGLWKVKDNPLI 462



 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 114/239 (47%), Gaps = 23/239 (9%)

Query: 65  HNNLSFFPDNA-SKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDM 122
           HN L        S    LR L+LS+N++  LP  +     L  L    N L    LP+ +
Sbjct: 204 HNRLGAVTAEVLSALPQLRKLNLSHNQLVDLPAQLGTLGHLEELDVSFNKLP--QLPEAL 261

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
            +L+ L+  +L  NQL  FP Q+L + TL+ L +  N L  +P EI  L  L +L L G 
Sbjct: 262 GHLRALRTLDLDHNQLTAFPPQLLQLATLEELDVSGNRLRGLPEEIGTLRALKILWLSGA 321

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            L  +P  F  L  LE+L+L  N L++LPA  S L+ L+ L L +N     P  ++ L  
Sbjct: 322 ELGTLPSGFCQLASLESLMLDSNGLQALPAQFSRLQQLRMLNLSSNLFEDFPGALLPLAS 381

Query: 243 LSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           L E                   KL +L L NN++R LP  I+ L  L EL L+ N + +
Sbjct: 382 LEELYLSRNRLTAVPALVSGLSKLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAV 440



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/204 (31%), Positives = 94/204 (46%), Gaps = 26/204 (12%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF---------------- 101
           + TL L HN L+ FP    +   L  LD+S NR+  LP+ I                   
Sbjct: 267 LRTLDLDHNQLTAFPPQLLQLATLEELDVSGNRLRGLPEEIGTLRALKILWLSGAELGTL 326

Query: 102 --------PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKY 153
                    L +L+  +N L A  LP   S L+ L++ NLS N  E FP  +L + +L+ 
Sbjct: 327 PSGFCQLASLESLMLDSNGLQA--LPAQFSRLQQLRMLNLSSNLFEDFPGALLPLASLEE 384

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           LYL  N L  VP  ++ L KL  L L  N +  +PD+  +L  LE L+L  NQ+  LP +
Sbjct: 385 LYLSRNRLTAVPALVSGLSKLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAVLPDN 444

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEI 237
              L  +    + +N L   P E+
Sbjct: 445 FGQLSRVGLWKVKDNPLIQPPYEV 468



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 48/177 (27%), Positives = 74/177 (41%), Gaps = 56/177 (31%)

Query: 151 LKYLYLGNNSLNHVPREI------------------------------------------ 168
           ++ L LGNN+L+ +P  +                                          
Sbjct: 146 VEVLNLGNNALDELPTGLATALGSLPLLRGLVLRRNRLPRLPPLLGQLGARLTELDVSHN 205

Query: 169 ----------NKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
                     + L +L  L+L  N L D+P   G L  LE L +S N+L  LP ++ +L+
Sbjct: 206 RLGAVTAEVLSALPQLRKLNLSHNQLVDLPAQLGTLGHLEELDVSFNKLPQLPEALGHLR 265

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            L++L L +N+L   P +++ L  L E    L +  N+LR LP EI TL+ L  L L
Sbjct: 266 ALRTLDLDHNQLTAFPPQLLQLATLEE----LDVSGNRLRGLPEEIGTLRALKILWL 318



 Score = 38.9 bits (89), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 32/123 (26%), Positives = 55/123 (44%), Gaps = 4/123 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           +++ L L  N L+  P   S  + L +L L NNRI +LP +I     L  L+ + N +  
Sbjct: 381 SLEELYLSRNRLTAVPALVSGLSKLLTLWLDNNRIRYLPDSIVELTGLEELVLQGNQIAV 440

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP +   L  + ++ +  N L Q P ++  +  + Y+      L H    +    KL 
Sbjct: 441 --LPDNFGQLSRVGLWKVKDNPLIQPPYEVC-MKGIPYIAAYQKELAHSQPAVQPRLKLL 497

Query: 176 VLS 178
           +L 
Sbjct: 498 LLG 500


>gi|348678832|gb|EGZ18649.1| hypothetical protein PHYSODRAFT_360673 [Phytophthora sojae]
          Length = 1247

 Score =  108 bits (270), Expect = 4e-21,   Method: Composition-based stats.
 Identities = 92/268 (34%), Positives = 136/268 (50%), Gaps = 32/268 (11%)

Query: 32  SSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRI 91
           S LD+  L+++I    N  + KK      L+L HN L+  P       +L  LD+S+N++
Sbjct: 284 SGLDAWKLSSRIW---NLQFLKK------LVLSHNCLTRIPSGIQDLIHLEELDVSHNQL 334

Query: 92  THLPQAI-TNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPT 150
           T LP  + T   L+ + A +N + A S PK +  L+ ++  +LS N+L++ P    D+  
Sbjct: 335 TRLPSCLQTTTTLTEIRASHNFIQAFS-PK-LWKLREIRYLDLSHNRLKELPYVEGDLKL 392

Query: 151 LK----------------YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
           L+                 L L +N L  VP+ I K  +L +L L  N LT + D    L
Sbjct: 393 LRETREWQVGVGLLARLEVLLLNDNRLVEVPKSIEKCSELTLLDLSNNQLTALRDEIPAL 452

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
             L+ L+L  N L SLP +I NL  L+   L +N+L TLP  I  L     KL+ LLL +
Sbjct: 453 ASLKRLVLHHNALRSLPEAIGNLSCLEEFDLAHNRLLTLPESIGAL----HKLEMLLLFS 508

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPLVI 282
           N+LR LP E   L  L  L+L +NP +I
Sbjct: 509 NQLRLLPKEFGALSQLRHLNLDNNPKLI 536



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 97/329 (29%), Positives = 139/329 (42%), Gaps = 65/329 (19%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L   P +  K + L  LDLSNN++T L   I     L  L+  +N L   SLP+ + N
Sbjct: 417 NRLVEVPKSIEKCSELTLLDLSNNQLTALRDEIPALASLKRLVLHHNAL--RSLPEAIGN 474

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN-S 183
           L  L+ F+L+ N+L   P  I  +  L+ L L +N L  +P+E   L +L  L+L  N  
Sbjct: 475 LSCLEEFDLAHNRLLTLPESIGALHKLEMLLLFSNQLRLLPKEFGALSQLRHLNLDNNPK 534

Query: 184 LTDIPDTFGDLYQ----------------------------------------------- 196
           L ++ D FG L                                                 
Sbjct: 535 LINLKDFFGHLSSVSFFSASSCGIVTFESLDFLKDSPVRTLRLRQNALLEFPLLIGHAAM 594

Query: 197 ---LEALILSDNQLESLP-ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLL 252
              L+ L+L+ N L  +P A +     L+ L L NN LR LPTEI  L+    +LK L L
Sbjct: 595 QDTLQELVLAGNHLSQVPLAVLLYCSHLQHLDLSNNSLRVLPTEIAHLR----RLKVLYL 650

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDN-----PLVIRFVSDMTYKPPSLLELASRTLKVHE 307
             N+L+ LP E+  L  L EL+   N     PL +  +S +     S  +L S    V E
Sbjct: 651 STNELQELPDELTQLPRLRELTCDHNQLEKLPLRVGNLSQLIKLNVSFNQLRSLPTSVME 710

Query: 308 IDYSQE-HLPQNLVQYLESAHHCVNPKCK 335
           + + Q  +   NL+  L  A   VN  C+
Sbjct: 711 LTHLQSLYASDNLLSGLPPAISRVNCFCE 739



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 63/195 (32%), Positives = 91/195 (46%), Gaps = 26/195 (13%)

Query: 54  KPENIDTLLLYHNNLSFFP---DNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN 110
           K   + TL L  N L  FP    +A+    L+ L L+ N ++ +P A+  +         
Sbjct: 568 KDSPVRTLRLRQNALLEFPLLIGHAAMQDTLQELVLAGNHLSQVPLAVLLY--------- 618

Query: 111 NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
                       S+L++L   +LS N L   P +I  +  LK LYL  N L  +P E+ +
Sbjct: 619 -----------CSHLQHL---DLSNNSLRVLPTEIAHLRRLKVLYLSTNELQELPDELTQ 664

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L +L  L+   N L  +P   G+L QL  L +S NQL SLP S+  L  L+SL   +N L
Sbjct: 665 LPRLRELTCDHNQLEKLPLRVGNLSQLIKLNVSFNQLRSLPTSVMELTHLQSLYASDNLL 724

Query: 231 RTLPTEIITLKCLSE 245
             LP  I  + C  E
Sbjct: 725 SGLPPAISRVNCFCE 739


>gi|410451628|ref|ZP_11305630.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
 gi|410014394|gb|EKO76524.1| leucine rich repeat protein [Leptospira sp. Fiocruz LV3954]
          Length = 350

 Score =  108 bits (270), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 95/280 (33%), Positives = 130/280 (46%), Gaps = 56/280 (20%)

Query: 50  DYNKKPEN-IDTLLLY--HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LST 105
           D+N+  +N +D  +LY   N L+  P    +   L  L+L NN+ T LPQ I     L +
Sbjct: 29  DFNEALKNAMDVRILYLESNQLTTLPQEIGRLQKLEELNLRNNQFTALPQEIGTLQNLQS 88

Query: 106 LIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
           L   +N L  ESLPK++  L+NL+  +L  N+LE  P +I  +  LK LYL +N L  +P
Sbjct: 89  LSLESNRL--ESLPKEIGRLQNLQNLDLIYNRLESLPKEIGQLQNLKRLYLVDNHLTTLP 146

Query: 166 -----------------------REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI- 201
                                  +EI  L  L  LSL    LT  P   G L +LE L  
Sbjct: 147 QEIGTLQNLKGLYLSNSRLTTFLQEIGTLQNLKELSLSSTQLTTFPKEIGQLQKLEELYL 206

Query: 202 ----------------------LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
                                 LSDNQ  + P  I  L+ L+ L L +N+L TL  EI+ 
Sbjct: 207 PSTQLVTLSKEIGQLQNLKLLDLSDNQFTTFPKEIGKLRKLEYLFLEHNRLTTLSEEIVG 266

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L    +K+  L L NN+LRTLP  I  L+ L +L+L  NP
Sbjct: 267 L----QKIVKLNLANNQLRTLPQGIGQLQSLKDLNLSGNP 302



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 66/160 (41%), Positives = 85/160 (53%), Gaps = 4/160 (2%)

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           + N  ++++  L  NQL   P +I  +  L+ L L NN    +P+EI  L  L  LSL  
Sbjct: 34  LKNAMDVRILYLESNQLTTLPQEIGRLQKLEELNLRNNQFTALPQEIGTLQNLQSLSLES 93

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L  +P   G L  L+ L L  N+LESLP  I  L+ LK L L +N L TLP EI TL 
Sbjct: 94  NRLESLPKEIGRLQNLQNLDLIYNRLESLPKEIGQLQNLKRLYLVDNHLTTLPQEIGTL- 152

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
              + LK L L N++L T   EI TL+ L ELSL    L 
Sbjct: 153 ---QNLKGLYLSNSRLTTFLQEIGTLQNLKELSLSSTQLT 189



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/165 (38%), Positives = 87/165 (52%), Gaps = 4/165 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LP+++  L+ L+  NL  NQ    P +I  +  L+ L L +N L  +P+EI +L  L  
Sbjct: 52  TLPQEIGRLQKLEELNLRNNQFTALPQEIGTLQNLQSLSLESNRLESLPKEIGRLQNLQN 111

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L  +P   G L  L+ L L DN L +LP  I  L+ LK L L N++L T   E
Sbjct: 112 LDLIYNRLESLPKEIGQLQNLKRLYLVDNHLTTLPQEIGTLQNLKGLYLSNSRLTTFLQE 171

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I TL    + LK L L + +L T P EI  L+ L EL L    LV
Sbjct: 172 IGTL----QNLKELSLSSTQLTTFPKEIGQLQKLEELYLPSTQLV 212



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/95 (38%), Positives = 50/95 (52%), Gaps = 4/95 (4%)

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           D  +   +   +  L L  NQL +LP  I  L+ L+ L L NN+   LP EI TL    +
Sbjct: 29  DFNEALKNAMDVRILYLESNQLTTLPQEIGRLQKLEELNLRNNQFTALPQEIGTL----Q 84

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            L+SL L +N+L +LP EI  L+ L  L L  N L
Sbjct: 85  NLQSLSLESNRLESLPKEIGRLQNLQNLDLIYNRL 119



 Score = 39.3 bits (90), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 33/119 (27%), Positives = 49/119 (41%), Gaps = 30/119 (25%)

Query: 46  LPNNDYNKKPENI------DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N +   P+ I      + L L HN L+   +       +  L+L+NN++  LPQ I 
Sbjct: 229 LSDNQFTTFPKEIGKLRKLEYLFLEHNRLTTLSEEIVGLQKIVKLNLANNQLRTLPQGI- 287

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
                                    L++LK  NLSGN    FP +I+ +  LK L L N
Sbjct: 288 -----------------------GQLQSLKDLNLSGNPFTTFPQEIVGLKHLKRLVLEN 323


>gi|28302239|gb|AAH46591.1| Lrrc1 protein, partial [Mus musculus]
          Length = 596

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 118/209 (56%), Gaps = 7/209 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 224 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS- 282

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L YL +  N L  +P  I KL KL 
Sbjct: 283 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLS 341

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L L  N LT +P+  GD   L  L+L++N+L +LP SI  LK L +L    NKL +LP 
Sbjct: 342 ILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPK 401

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           EI    C S  L    + +N+L  LP E+
Sbjct: 402 EIG--GCCS--LTMFCIRDNRLTRLPAEV 426



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 115/224 (51%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN++  
Sbjct: 109 SLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDI-- 166

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+ ++  K L+V + SGN L + P    ++  L  L + + SL  +P  I  L  L
Sbjct: 167 -PEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNL 225

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +PD+   L +LE L L +N++ +LP SI  L  LK L L  N+L  LP
Sbjct: 226 ASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELP 285

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK     L  L +  N+L  LP EI  L  L+ L +  N
Sbjct: 286 QEIGNLK----NLLCLDVSENRLERLPEEISGLTSLTYLVISQN 325



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 124/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N++   P++ +    L+  D S N +T LP++  
Sbjct: 138 LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFP 197

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 198 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 256

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 257 EIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 316

Query: 220 LKSLLLHNNKLRTLP-------------------TEIITLKCLSEKLKSLLLHNNKLRTL 260
           L  L++  N L T+P                   T++       E L  L+L  N+L TL
Sbjct: 317 LTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTL 376

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK LS L+   N LV
Sbjct: 377 PKSIGKLKKLSNLNADRNKLV 397



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 110/238 (46%), Gaps = 30/238 (12%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ ++D  +  + ++P+ I  +   L  L+   N L    LP+    L  L+   LS N+
Sbjct: 85  HVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQL--RELPEQFFQLVKLRKLGLSDNE 142

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK-LHVLSLGGNSLTDIPDTFGDLYQ 196
           +++ P +I +   L  L +  N +  +P  I   CK L V    GN LT +P++F +L  
Sbjct: 143 IQRLPPEIANFMQLVELDVSRNDIPEIPESI-AFCKALQVADFSGNPLTRLPESFPELQN 201

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE----------- 245
           L  L ++D  L+SLP +I NL  L SL L  N L  LP  +  L+ L E           
Sbjct: 202 LTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNL 261

Query: 246 --------KLKSLLLHNNKLRTLPTEIITLK---CL--SELSLRDNPLVIRFVSDMTY 290
                    LK L L  N+L  LP EI  LK   CL  SE  L   P  I  ++ +TY
Sbjct: 262 PESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTY 319



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 96/218 (44%), Gaps = 29/218 (13%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN+    PE+I  LL      L  N LS  P       NL  LD+S NR+  LP+ I+
Sbjct: 253 LGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS 312

Query: 100 NF-PLSTLIARNNLLTA---------------------ESLPKDMSNLKNLKVFNLSGNQ 137
               L+ L+   NLL                         LP+ + + +NL    L+ N+
Sbjct: 313 GLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENR 372

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           L   P  I  +  L  L    N L  +P+EI   C L +  +  N LT +P       +L
Sbjct: 373 LLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTMFCIRDNRLTRLPAEVSQAVEL 432

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
             L ++ N+L  LP S++ LK LK+L L +N+ + L T
Sbjct: 433 HVLDVAGNRLHHLPLSLTTLK-LKALWLSDNQSQPLLT 469


>gi|60360214|dbj|BAD90351.1| mKIAA4018 protein [Mus musculus]
          Length = 606

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 118/209 (56%), Gaps = 7/209 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 234 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS- 292

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L YL +  N L  +P  I KL KL 
Sbjct: 293 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLS 351

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L L  N LT +P+  GD   L  L+L++N+L +LP SI  LK L +L    NKL +LP 
Sbjct: 352 ILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPK 411

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           EI    C S  L    + +N+L  LP E+
Sbjct: 412 EIG--GCCS--LTMFCIRDNRLTRLPAEV 436



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 115/224 (51%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN++  
Sbjct: 119 SLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDI-- 176

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+ ++  K L+V + SGN L + P    ++  L  L + + SL  +P  I  L  L
Sbjct: 177 -PEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNL 235

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +PD+   L +LE L L +N++ +LP SI  L  LK L L  N+L  LP
Sbjct: 236 ASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELP 295

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK     L  L +  N+L  LP EI  L  L+ L +  N
Sbjct: 296 QEIGNLK----NLLCLDVSENRLERLPEEISGLTSLTYLVISQN 335



 Score = 92.8 bits (229), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 124/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N++   P++ +    L+  D S N +T LP++  
Sbjct: 148 LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFP 207

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 208 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 266

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 267 EIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 326

Query: 220 LKSLLLHNNKLRTLP-------------------TEIITLKCLSEKLKSLLLHNNKLRTL 260
           L  L++  N L T+P                   T++       E L  L+L  N+L TL
Sbjct: 327 LTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTL 386

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK LS L+   N LV
Sbjct: 387 PKSIGKLKKLSNLNADRNKLV 407



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 110/238 (46%), Gaps = 30/238 (12%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ ++D  +  + ++P+ I  +   L  L+   N L    LP+    L  L+   LS N+
Sbjct: 95  HVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQL--RELPEQFFQLVKLRKLGLSDNE 152

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK-LHVLSLGGNSLTDIPDTFGDLYQ 196
           +++ P +I +   L  L +  N +  +P  I   CK L V    GN LT +P++F +L  
Sbjct: 153 IQRLPPEIANFMQLVELDVSRNDIPEIPESI-AFCKALQVADFSGNPLTRLPESFPELQN 211

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE----------- 245
           L  L ++D  L+SLP +I NL  L SL L  N L  LP  +  L+ L E           
Sbjct: 212 LTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNL 271

Query: 246 --------KLKSLLLHNNKLRTLPTEIITLK---CL--SELSLRDNPLVIRFVSDMTY 290
                    LK L L  N+L  LP EI  LK   CL  SE  L   P  I  ++ +TY
Sbjct: 272 PESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTY 329



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 96/218 (44%), Gaps = 29/218 (13%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN+    PE+I  LL      L  N LS  P       NL  LD+S NR+  LP+ I+
Sbjct: 263 LGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS 322

Query: 100 NF-PLSTLIARNNLLTA---------------------ESLPKDMSNLKNLKVFNLSGNQ 137
               L+ L+   NLL                         LP+ + + +NL    L+ N+
Sbjct: 323 GLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENR 382

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           L   P  I  +  L  L    N L  +P+EI   C L +  +  N LT +P       +L
Sbjct: 383 LLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTMFCIRDNRLTRLPAEVSQAVEL 442

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
             L ++ N+L  LP S++ LK LK+L L +N+ + L T
Sbjct: 443 HVLDVAGNRLHHLPLSLTTLK-LKALWLSDNQSQPLLT 479


>gi|320164112|gb|EFW41011.1| leucine-rich repeat-containing protein [Capsaspora owczarzaki ATCC
            30864]
          Length = 1524

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 112/364 (30%), Positives = 169/364 (46%), Gaps = 44/364 (12%)

Query: 50   DYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIA 108
            DY     ++  L L++N L   P    +   L++L L +N+IT +P        L  L  
Sbjct: 1168 DYVHSLPDLAKLWLHNNWLESIPFGLCQLKGLKTLLLHSNQITTIPPEFGELAELEVLSL 1227

Query: 109  RNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREI 168
             +NLLT+   P  +  L  +   NL+ NQL   P  I ++  LK L L +N L+ +P   
Sbjct: 1228 DHNLLTSIP-PHSLGRLTRMVKLNLNNNQLTGLPADIGNLTRLKTLSLHDNCLSSLPTSF 1286

Query: 169  NKLCKLHVLSLGG-----------------------NSLTDIPDTFGDLYQ-LEALILSD 204
            + L  +  LSL G                       N++T IP   G+L Q L  L L+ 
Sbjct: 1287 SALANVKRLSLAGNRFATIPVEVCRLASLVELNMDNNAITAIPPALGELGQELHTLSLAH 1346

Query: 205  NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP--T 262
            N L  LP  +S L  L+SL +  NKL  L  EI  +     +L  LLL++N+L TLP   
Sbjct: 1347 NFLTQLPG-LSKLAGLRSLDVSFNKLTKLSPEIGRMT----RLNILLLNDNQLVTLPPTI 1401

Query: 263  EIITLKCLSELSLRDNPLVIRFVS-DMTYKPPSLLELASRTLKVHEIDYSQE--HLPQNL 319
             I+  + L  L L +NPL     S   TY+ PSL  L ++  K+ E D  ++   L   +
Sbjct: 1402 RIMAKRSLKALRLANNPLYSGVESLTQTYEIPSLFALCAQ--KIFECDRQEDLASLTPGV 1459

Query: 320  VQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCSSRCITNSPNVMYGD 379
            + YL++   C    C   +F++    + FV+  G  R+PL   LCS RC+     V  G 
Sbjct: 1460 LAYLKNPRRCF--ICARHYFESPARFVSFVNI-GGMRVPLDYELCSIRCVG---RVQRGF 1513

Query: 380  VKNE 383
            V+++
Sbjct: 1514 VRSD 1517



 Score = 49.7 bits (117), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 66/140 (47%), Gaps = 30/140 (21%)

Query: 165  PREINKLCKL----HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
            P  I++L +L      L L  ++L+ +    G   +L  L LS+N L++LP  I+  K L
Sbjct: 1095 PTHISQLAELAELVRALGLSSDALSSLISLTGLPEKLTVLPLSNNHLKTLPREIAQFKSL 1154

Query: 221  KSLL----------------------LHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            + LL                      LHNN L ++P  +  LK     LK+LLLH+N++ 
Sbjct: 1155 EMLLLDHNQLSRVDYVHSLPDLAKLWLHNNWLESIPFGLCQLK----GLKTLLLHSNQIT 1210

Query: 259  TLPTEIITLKCLSELSLRDN 278
            T+P E   L  L  LSL  N
Sbjct: 1211 TIPPEFGELAELEVLSLDHN 1230



 Score = 38.1 bits (87), Expect = 7.2,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 9/89 (10%)

Query: 197  LEALILSDNQLESL-PASISNL----KMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLL 251
            L+A I + + L S  P  IS L    +++++L L ++ L +L    I+L  L EKL  L 
Sbjct: 1080 LQATISASSDLTSSNPTHISQLAELAELVRALGLSSDALSSL----ISLTGLPEKLTVLP 1135

Query: 252  LHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            L NN L+TLP EI   K L  L L  N L
Sbjct: 1136 LSNNHLKTLPREIAQFKSLEMLLLDHNQL 1164


>gi|398341179|ref|ZP_10525882.1| hypothetical protein LkirsB1_18573 [Leptospira kirschneri serovar
           Bim str. 1051]
          Length = 285

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 80/204 (39%), Positives = 110/204 (53%), Gaps = 7/204 (3%)

Query: 78  FTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGN 136
           F NL  L+L  N++T LP+ I     L  L   +N LT  SLPK+M  L+NL++ NL  N
Sbjct: 39  FQNLEKLNLVGNQLTSLPKEIGRLQKLRVLNLAHNQLT--SLPKEMELLQNLEILNLDDN 96

Query: 137 QLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQ 196
           +   FP +   +  L+ L L  N L  +P+E+  L  L  L L GN    +P     L  
Sbjct: 97  EFTSFPKETRQLQKLRILNLAGNQLTSLPKEMELLQNLERLDLAGNRFKILPKEMELLQN 156

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
           LEAL LS NQ  S P  I   + LK L L  N+L+TL  EI+ L    + L+SL L  N+
Sbjct: 157 LEALNLSHNQFTSFPKEIRRQQNLKWLYLSRNQLKTLSKEIVEL----QNLQSLHLDGNQ 212

Query: 257 LRTLPTEIITLKCLSELSLRDNPL 280
           L ++P EI   + L EL+L++N L
Sbjct: 213 LSSIPKEIGQFQNLFELNLQNNKL 236



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 71/206 (34%), Positives = 107/206 (51%), Gaps = 14/206 (6%)

Query: 24  IKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRS 83
           ++ L+ +++ L S  L  ++ELL         +N++ L L  N  + FP    +   LR 
Sbjct: 65  LRVLNLAHNQLTS--LPKEMELL---------QNLEILNLDDNEFTSFPKETRQLQKLRI 113

Query: 84  LDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
           L+L+ N++T LP+ +     L  L    N      LPK+M  L+NL+  NLS NQ   FP
Sbjct: 114 LNLAGNQLTSLPKEMELLQNLERLDLAGNRFKI--LPKEMELLQNLEALNLSHNQFTSFP 171

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
            +I     LK+LYL  N L  + +EI +L  L  L L GN L+ IP   G    L  L L
Sbjct: 172 KEIRRQQNLKWLYLSRNQLKTLSKEIVELQNLQSLHLDGNQLSSIPKEIGQFQNLFELNL 231

Query: 203 SDNQLESLPASISNLKMLKSLLLHNN 228
            +N+L++LP  I  L+ L+ L L++N
Sbjct: 232 QNNKLKTLPKEIGLLQNLQVLRLYSN 257



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 105/213 (49%), Gaps = 26/213 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI----------------T 99
           +N++ L L  N L+  P    +   LR L+L++N++T LP+ +                T
Sbjct: 40  QNLEKLNLVGNQLTSLPKEIGRLQKLRVLNLAHNQLTSLPKEMELLQNLEILNLDDNEFT 99

Query: 100 NFP--------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
           +FP        L  L    N LT  SLPK+M  L+NL+  +L+GN+ +  P ++  +  L
Sbjct: 100 SFPKETRQLQKLRILNLAGNQLT--SLPKEMELLQNLERLDLAGNRFKILPKEMELLQNL 157

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           + L L +N     P+EI +   L  L L  N L  +     +L  L++L L  NQL S+P
Sbjct: 158 EALNLSHNQFTSFPKEIRRQQNLKWLYLSRNQLKTLSKEIVELQNLQSLHLDGNQLSSIP 217

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
             I   + L  L L NNKL+TLP EI  L+ L 
Sbjct: 218 KEIGQFQNLFELNLQNNKLKTLPKEIGLLQNLQ 250



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 72/138 (52%), Gaps = 4/138 (2%)

Query: 145 ILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD 204
           IL++     + +G + L+ +PR I     L  L+L GN LT +P   G L +L  L L+ 
Sbjct: 13  ILEMSMSTGVSMGLHELDSLPRVIGLFQNLEKLNLVGNQLTSLPKEIGRLQKLRVLNLAH 72

Query: 205 NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           NQL SLP  +  L+ L+ L L +N+  + P E   L    +KL+ L L  N+L +LP E+
Sbjct: 73  NQLTSLPKEMELLQNLEILNLDDNEFTSFPKETRQL----QKLRILNLAGNQLTSLPKEM 128

Query: 265 ITLKCLSELSLRDNPLVI 282
             L+ L  L L  N   I
Sbjct: 129 ELLQNLERLDLAGNRFKI 146


>gi|359728059|ref|ZP_09266755.1| hypothetical protein Lwei2_14517 [Leptospira weilii str.
           2006001855]
          Length = 576

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 91/267 (34%), Positives = 128/267 (47%), Gaps = 49/267 (18%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLT 114
           N+  L L  N LS  P+   +   L+SLDL  NR+  LP  I     LS L +++N L T
Sbjct: 73  NLQELNLAFNELSTIPEEIKRLQKLQSLDLYGNRLEALPPEIGQLQNLSWLSLSKNQLAT 132

Query: 115 AES--------------------LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYL 154
             +                    LPK +  L NLK+ N+S N++  FP +I  +  LK L
Sbjct: 133 LPAEIKLLQNLQYLNLSKDRLTILPKGIGELSNLKILNVSYNKVSVFPEEIGKLQNLKDL 192

Query: 155 YLGNNSLNHV-----------------------PREINKLCKLHVLSLGGNSLTDIPDTF 191
            L NN +  V                       P+EI +L  L  L+LG N L +IP   
Sbjct: 193 DLSNNRIQVVSEKVGKLRNLERLNLIENRLTVLPKEIGQLQNLQTLNLGYNKLANIPKEI 252

Query: 192 GDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLL 251
           G+L  L+ L LSDN+L+ LP  +  +  L+SL L++N++  LP EI  L    + L+SL 
Sbjct: 253 GELRSLKELDLSDNELKVLPKELGTIANLQSLKLNDNRIVNLPKEIELL----QNLRSLD 308

Query: 252 LHNNKLRTLPTEIITLKCLSELSLRDN 278
           L  N+ + LP EI  L+ L  L L DN
Sbjct: 309 LSGNQFKVLPKEIGRLQNLQSLDLSDN 335



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/190 (36%), Positives = 105/190 (55%), Gaps = 3/190 (1%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L + +N +S FP+   K  NL+ LDLSNNRI  + + +     L  L    N LT 
Sbjct: 165 NLKILNVSYNKVSVFPEEIGKLQNLKDLDLSNNRIQVVSEKVGKLRNLERLNLIENRLTV 224

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LPK++  L+NL+  NL  N+L   P +I ++ +LK L L +N L  +P+E+  +  L 
Sbjct: 225 --LPKEIGQLQNLQTLNLGYNKLANIPKEIGELRSLKELDLSDNELKVLPKELGTIANLQ 282

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N + ++P     L  L +L LS NQ + LP  I  L+ L+SL L +N+  TLP+
Sbjct: 283 SLKLNDNRIVNLPKEIELLQNLRSLDLSGNQFKVLPKEIGRLQNLQSLDLSDNQFTTLPS 342

Query: 236 EIITLKCLSE 245
           E+  L+ L +
Sbjct: 343 EVGELRNLKK 352



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 89/279 (31%), Positives = 120/279 (43%), Gaps = 54/279 (19%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ +L L  N +   P       NLRSLDLS N+   LP+ I     L +L   +N  T 
Sbjct: 280 NLQSLKLNDNRIVNLPKEIELLQNLRSLDLSGNQFKVLPKEIGRLQNLQSLDLSDNQFT- 338

Query: 116 ESLPKDMSNLKNLKVFNLSGNQL---EQFPIQ---------------------------- 144
            +LP ++  L+NLK  N+  N L   E+  IQ                            
Sbjct: 339 -TLPSEVGELRNLKKLNIDSNPLLPGEKDKIQNLLPNCEIDSSYAGKDDQIYYDLNIASE 397

Query: 145 -ILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILS 203
             L +  L   Y    S  + P++I +   L  L L    L  IP     L  LE L L 
Sbjct: 398 NPLKVLNLSLEYKEYESFYNFPKKILEFRNLRGLGLYDVGLEIIPKEIRRLQNLETLRLG 457

Query: 204 DNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS------------------- 244
            N+L++LP  I  LK L+ L L  N+L+TLP EI  L+ L                    
Sbjct: 458 LNRLKTLPKEIGQLKNLRGLSLEANELKTLPKEIEQLQNLRGLNLHQNRFKIFPKEIGQL 517

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
            KL+ L L  N+L TLP EI  L+ L EL+L DNPL ++
Sbjct: 518 RKLQKLDLSVNQLTTLPAEIGQLQNLQELNLSDNPLSLK 556



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 114/253 (45%), Gaps = 51/253 (20%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNL 112
           + P++   L+L    L+  P       NL+ L+L+ N ++                    
Sbjct: 46  RNPKDAQILVLSSQELTVLPWEVGNLGNLQELNLAFNELS-------------------- 85

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE----- 167
               ++P+++  L+ L+  +L GN+LE  P +I  +  L +L L  N L  +P E     
Sbjct: 86  ----TIPEEIKRLQKLQSLDLYGNRLEALPPEIGQLQNLSWLSLSKNQLATLPAEIKLLQ 141

Query: 168 ------------------INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
                             I +L  L +L++  N ++  P+  G L  L+ L LS+N+++ 
Sbjct: 142 NLQYLNLSKDRLTILPKGIGELSNLKILNVSYNKVSVFPEEIGKLQNLKDLDLSNNRIQV 201

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           +   +  L+ L+ L L  N+L  LP EI  L    + L++L L  NKL  +P EI  L+ 
Sbjct: 202 VSEKVGKLRNLERLNLIENRLTVLPKEIGQL----QNLQTLNLGYNKLANIPKEIGELRS 257

Query: 270 LSELSLRDNPLVI 282
           L EL L DN L +
Sbjct: 258 LKELDLSDNELKV 270



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 63/172 (36%), Positives = 89/172 (51%), Gaps = 6/172 (3%)

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
           K + N K+ ++  LS  +L   P ++ ++  L+ L L  N L+ +P EI +L KL  L L
Sbjct: 43  KALRNPKDAQILVLSSQELTVLPWEVGNLGNLQELNLAFNELSTIPEEIKRLQKLQSLDL 102

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
            GN L  +P   G L  L  L LS NQL +LPA I  L+ L+ L L  ++L  LP  I  
Sbjct: 103 YGNRLEALPPEIGQLQNLSWLSLSKNQLATLPAEIKLLQNLQYLNLSKDRLTILPKGIGE 162

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYK 291
           L      LK L +  NK+   P EI  L+ L +L L +N   I+ VS+   K
Sbjct: 163 L----SNLKILNVSYNKVSVFPEEIGKLQNLKDLDLSNN--RIQVVSEKVGK 208



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/110 (37%), Positives = 54/110 (49%), Gaps = 4/110 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           CK     L      D      +    + L+LS  +L  LP  + NL  L+ L L  N+L 
Sbjct: 26  CKEQTERLDKGIYVDFKKALRNPKDAQILVLSSQELTVLPWEVGNLGNLQELNLAFNELS 85

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           T+P EI  L    +KL+SL L+ N+L  LP EI  L+ LS LSL  N L 
Sbjct: 86  TIPEEIKRL----QKLQSLDLYGNRLEALPPEIGQLQNLSWLSLSKNQLA 131



 Score = 47.8 bits (112), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 61/127 (48%), Gaps = 7/127 (5%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           ++ +N++TL L  N L   P    +  NLR L L  N +  LP+ I     L  L    N
Sbjct: 446 RRLQNLETLRLGLNRLKTLPKEIGQLKNLRGLSLEANELKTLPKEIEQLQNLRGLNLHQN 505

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INK 170
                  PK++  L+ L+  +LS NQL   P +I  +  L+ L L +N L+   +E I K
Sbjct: 506 RFKI--FPKEIGQLRKLQKLDLSVNQLTTLPAEIGQLQNLQELNLSDNPLSLKEKERIRK 563

Query: 171 L---CKL 174
           L   CK+
Sbjct: 564 LLPNCKI 570


>gi|449495404|ref|XP_004174702.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog
           [Taeniopygia guttata]
          Length = 1780

 Score =  108 bits (270), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 79/225 (35%), Positives = 112/225 (49%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ TL L  N L   P + S    L  LDL  N +  LP  +   P L  L    N L+A
Sbjct: 103 NLVTLELRENLLKTLPTSLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSA 162

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP ++ NL+ L   ++S N+LEQ P ++  +  L  L L  N L  +P  I +L +L 
Sbjct: 163 --LPPELGNLRRLVCLDVSENKLEQLPNEVSGLVALTDLLLSQNLLECIPDGIGQLKQLS 220

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LTD+ ++ GD   L  LIL++N L +LP S+  L  L +L +  N+L  LP 
Sbjct: 221 ILKVDQNRLTDMTESIGDCENLSELILTENMLTALPKSLGKLAKLTNLNVDRNRLTALPA 280

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI     LS     L L +N+L  LP E+     L  L +  N L
Sbjct: 281 EIGGCANLS----VLSLRDNRLALLPPELANTTELHVLDVAGNRL 321



 Score =  108 bits (269), Expect = 5e-21,   Method: Composition-based stats.
 Identities = 83/233 (35%), Positives = 113/233 (48%), Gaps = 10/233 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           N+  L L  N +   P   + F  L  LD+S N I  +P++I  F  S  IA  +     
Sbjct: 11  NLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESI-KFCKSLEIADFSGNPLS 69

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            LP+  + L++L    L+   L+  P  I ++  L  L L  N L  +P  ++ L KL  
Sbjct: 70  RLPEGFTQLRSLVHLALNDVSLQSLPTDIGNLANLVTLELRENLLKTLPTSLSFLVKLEQ 129

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L LGGN L  +PDT G L  L  L L  NQL +LP  + NL+ L  L +  NKL  LP E
Sbjct: 130 LDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENKLEQLPNE 189

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMT 289
           +  L  L++    LLL  N L  +P  I  LK LS L +  N L     +DMT
Sbjct: 190 VSGLVALTD----LLLSQNLLECIPDGIGQLKQLSILKVDQNRL-----TDMT 233



 Score =  107 bits (266), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 91/274 (33%), Positives = 129/274 (47%), Gaps = 35/274 (12%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N LS  P+  ++  +L  L L++  +  LP  I N   L TL  R NLL  ++LP  +S 
Sbjct: 66  NPLSRLPEGFTQLRSLVHLALNDVSLQSLPTDIGNLANLVTLELRENLL--KTLPTSLSF 123

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L  L+  +L GN LE  P  +  +P L+ L+L  N L+ +P E+  L +L  L +  N L
Sbjct: 124 LVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENKL 183

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
             +P+    L  L  L+LS N LE +P  I  LK L  L +  N+L  +   I   + LS
Sbjct: 184 EQLPNEVSGLVALTDLLLSQNLLECIPDGIGQLKQLSILKVDQNRLTDMTESIGDCENLS 243

Query: 245 E-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFV 285
           E                   KL +L +  N+L  LP EI     LS LSLRDN L +   
Sbjct: 244 ELILTENMLTALPKSLGKLAKLTNLNVDRNRLTALPAEIGGCANLSVLSLRDNRLALL-- 301

Query: 286 SDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNL 319
                 PP L    + T ++H +D +   L QNL
Sbjct: 302 ------PPEL----ANTTELHVLDVAGNRL-QNL 324



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Composition-based stats.
 Identities = 69/215 (32%), Positives = 99/215 (46%), Gaps = 10/215 (4%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF- 101
           +E+LP  D      N+  L L  N LS  P        L  LD+S N++  LP  ++   
Sbjct: 137 LEVLP--DTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENKLEQLPNEVSGLV 194

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L+ L+   NLL  E +P  +  LK L +  +  N+L      I D   L  L L  N L
Sbjct: 195 ALTDLLLSQNLL--ECIPDGIGQLKQLSILKVDQNRLTDMTESIGDCENLSELILTENML 252

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +P+ + KL KL  L++  N LT +P   G    L  L L DN+L  LP  ++N   L 
Sbjct: 253 TALPKSLGKLAKLTNLNVDRNRLTALPAEIGGCANLSVLSLRDNRLALLPPELANTTELH 312

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
            L +  N+L+ LP  +  L      LK+L L  N+
Sbjct: 313 VLDVAGNRLQNLPFALTNL-----NLKALWLAENQ 342



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Composition-based stats.
 Identities = 58/157 (36%), Positives = 80/157 (50%), Gaps = 6/157 (3%)

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK-LHVLSLGGNS 183
           L NL+   LS N++++ P ++ +   L  L +  N +  +P  I K CK L +    GN 
Sbjct: 9   LLNLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESI-KFCKSLEIADFSGNP 67

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           L+ +P+ F  L  L  L L+D  L+SLP  I NL  L +L L  N L+TLPT +  L   
Sbjct: 68  LSRLPEGFTQLRSLVHLALNDVSLQSLPTDIGNLANLVTLELRENLLKTLPTSLSFLV-- 125

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             KL+ L L  N L  LP  +  L  L EL L  N L
Sbjct: 126 --KLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 160


>gi|429961197|gb|ELA40743.1| hypothetical protein VICG_02221, partial [Vittaforma corneae ATCC
           50505]
          Length = 209

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 83/198 (41%), Positives = 105/198 (53%), Gaps = 10/198 (5%)

Query: 81  LRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
           ++ LDLS N +  LP  I     L  L    N L    LP ++ NL NL+  NLS N+LE
Sbjct: 1   IKELDLSGNNLETLPLVIGELENLKALFLNANRLKL--LPDEIGNLVNLQYLNLSVNELE 58

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
             P  I ++  LK LYLG+N L  +P EI KL  L  L+L  N     P+  G+L  L  
Sbjct: 59  SLPAIIGNLINLKILYLGDNKLESLPAEIEKLKSLQKLNLLKNRFEIFPNVVGELKDLRG 118

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRT 259
           L L  N+LE+LP  I  L+ LK L L NNKL TLP  I  L    E L+ L L  NKL T
Sbjct: 119 LSLDGNKLETLPPEIGELENLKILNLSNNKLETLPDTIGEL----ENLQELYLGGNKLET 174

Query: 260 LPTEIITLK---CLSELS 274
           +P  I  LK   C+S ++
Sbjct: 175 IPVAIGNLKNQICISMIT 192



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/196 (38%), Positives = 103/196 (52%), Gaps = 14/196 (7%)

Query: 24  IKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRS 83
           IK LD S ++L  ETL   I  L         EN+  L L  N L   PD      NL+ 
Sbjct: 1   IKELDLSGNNL--ETLPLVIGEL---------ENLKALFLNANRLKLLPDEIGNLVNLQY 49

Query: 84  LDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
           L+LS N +  LP  I N   L  L   +N L  ESLP ++  LK+L+  NL  N+ E FP
Sbjct: 50  LNLSVNELESLPAIIGNLINLKILYLGDNKL--ESLPAEIEKLKSLQKLNLLKNRFEIFP 107

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
             + ++  L+ L L  N L  +P EI +L  L +L+L  N L  +PDT G+L  L+ L L
Sbjct: 108 NVVGELKDLRGLSLDGNKLETLPPEIGELENLKILNLSNNKLETLPDTIGELENLQELYL 167

Query: 203 SDNQLESLPASISNLK 218
             N+LE++P +I NLK
Sbjct: 168 GGNKLETIPVAIGNLK 183



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/176 (41%), Positives = 87/176 (49%), Gaps = 27/176 (15%)

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           +K  +LSGN LE  P+ I ++  LK L+L  N L  +P EI  L  L  L+L  N L  +
Sbjct: 1   IKELDLSGNNLETLPLVIGELENLKALFLNANRLKLLPDEIGNLVNLQYLNLSVNELESL 60

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKML-----------------------KSLL 224
           P   G+L  L+ L L DN+LESLPA I  LK L                       + L 
Sbjct: 61  PAIIGNLINLKILYLGDNKLESLPAEIEKLKSLQKLNLLKNRFEIFPNVVGELKDLRGLS 120

Query: 225 LHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L  NKL TLP EI  L    E LK L L NNKL TLP  I  L+ L EL L  N L
Sbjct: 121 LDGNKLETLPPEIGEL----ENLKILNLSNNKLETLPDTIGELENLQELYLGGNKL 172


>gi|418670524|ref|ZP_13231895.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|418725048|ref|ZP_13283724.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|418729740|ref|ZP_13288287.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
 gi|421121420|ref|ZP_15581717.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|409961430|gb|EKO25175.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|410345854|gb|EKO96924.1| leucine rich repeat protein [Leptospira interrogans str. Brem 329]
 gi|410753906|gb|EKR15564.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410775918|gb|EKR55909.1| leucine rich repeat protein [Leptospira interrogans str. UI 12758]
          Length = 423

 Score =  108 bits (270), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 96/244 (39%), Positives = 129/244 (52%), Gaps = 16/244 (6%)

Query: 38  TLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQA 97
           +L T+IE L      K  +N+D   L HN  +           L +LDL +N++  +P+ 
Sbjct: 170 SLPTEIEQL------KSLKNLD---LNHNEFTTVSKEVMLLETLENLDLRSNKLKTIPKE 220

Query: 98  ITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL 156
           I     L  L+   N LT  SLPK++  L+NLK  NL  N+ + FP++IL++  L  L L
Sbjct: 221 IRQLKSLKVLMLTGNQLT--SLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNLLELNL 278

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
             N L   P+E+ +L  L  LSL  N +T +P     L  L+ L LS N++  LP  I  
Sbjct: 279 YYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQ 338

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           LK L+ L L NNKL  LP EI  LK    KL+ L L NN+L TLP EI  LK L  L L 
Sbjct: 339 LKNLEWLSLSNNKLNALPKEIGQLK----KLQRLELGNNQLTTLPKEIEQLKNLQRLELD 394

Query: 277 DNPL 280
            NP+
Sbjct: 395 SNPI 398



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 85/247 (34%), Positives = 123/247 (49%), Gaps = 22/247 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +++  L L +N L+  P    +  NL+ L L +N + +LP+ I  F  L  L   NN LT
Sbjct: 87  KDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLT 146

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+  +L  N+L   P +I  + +LK L L +N    V +E+  L  L
Sbjct: 147 V--LPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETL 204

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  IP     L  L+ L+L+ NQL SLP  I  L+ LK+L L  N+ +  P
Sbjct: 205 ENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFP 264

Query: 235 TEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            EI+ LK L                    + LK L L++N++ TLP E+  L  L EL L
Sbjct: 265 VEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHL 324

Query: 276 RDNPLVI 282
             N + I
Sbjct: 325 SGNKITI 331



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 81/229 (35%), Positives = 117/229 (51%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L L    L    +   +  NL+ LDL  N  T L + I     L  L   NN L
Sbjct: 40  PADVRNLDLSFLGLKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKL 99

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++  L+NL+  +L  N+L   P +I     L+ L L NN L  +P+EI +L  
Sbjct: 100 TV--LPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQN 157

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  LSL  N L  +P     L  L+ L L+ N+  ++   +  L+ L++L L +NKL+T+
Sbjct: 158 LQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENLDLRSNKLKTI 217

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK     LK L+L  N+L +LP EI  L+ L  L+L +N   I
Sbjct: 218 PKEIRQLKS----LKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQI 262



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 121/244 (49%), Gaps = 18/244 (7%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
             ++ LD S+  L  +TL  +I  L         +N+  L L  N  +       +  +L
Sbjct: 41  ADVRNLDLSFLGL--KTLTNKIGQL---------KNLQKLDLGGNEPTILSKEIWQLKDL 89

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           + L+L+NN++T LP+ I     L  L   +N L   +LPK++   KNL+  NL  N+L  
Sbjct: 90  QKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELV--NLPKEIGQFKNLQKLNLDNNKLTV 147

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P +I  +  L+ L L +N L  +P EI +L  L  L L  N  T +      L  LE L
Sbjct: 148 LPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNEFTTVSKEVMLLETLENL 207

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L  N+L+++P  I  LK LK L+L  N+L +LP EI  L    + LK+L L  N+ +  
Sbjct: 208 DLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQL----QNLKTLNLGENRFQIF 263

Query: 261 PTEI 264
           P EI
Sbjct: 264 PVEI 267



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 63/163 (38%), Positives = 86/163 (52%), Gaps = 4/163 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++L K + N  +++  +LS   L+    +I  +  L+ L LG N    + +EI +L  L 
Sbjct: 31  KNLEKALQNPADVRNLDLSFLGLKTLTNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQ 90

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L+L  N LT +P   G L  L+ L L  N+L +LP  I   K L+ L L NNKL  LP 
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPK 150

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           EI  L+ L E    L L +NKL +LPTEI  LK L  L L  N
Sbjct: 151 EIGQLQNLQE----LSLLSNKLISLPTEIEQLKSLKNLDLNHN 189



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 3/123 (2%)

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDM 122
           Y+N L  FP    +  +L+ L L +N+IT LP  +T  P L  L    N +T   LPK++
Sbjct: 279 YYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITI--LPKEI 336

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             LKNL+  +LS N+L   P +I  +  L+ L LGNN L  +P+EI +L  L  L L  N
Sbjct: 337 LQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSN 396

Query: 183 SLT 185
            ++
Sbjct: 397 PIS 399



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 5/113 (4%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           LYHN ++  P   ++  +L+ L LS N+IT LP+ I     L  L   NN L A  LPK+
Sbjct: 301 LYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNA--LPKE 358

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           +  LK L+   L  NQL   P +I  +  L+ L L +N ++  P+E  ++ KL
Sbjct: 359 IGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS--PKEKERIRKL 409


>gi|392968303|ref|ZP_10333719.1| Leucine-rich repeat-containing protein 40 [Fibrisoma limi BUZ 3]
 gi|387842665|emb|CCH55773.1| Leucine-rich repeat-containing protein 40 [Fibrisoma limi BUZ 3]
          Length = 840

 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 78/221 (35%), Positives = 117/221 (52%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           +LLY N +   P    K  NL++LDLS N++T +P  +     L +L+  +N L  ESLP
Sbjct: 607 VLLYSNEIQQLPPQIGKLVNLQTLDLSFNKLTSVPDELGELSDLQSLVLNSNQL--ESLP 664

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
           + +  L NL+   L  N+L+     +  +  LK LY+ +N L  +P E++KL  L  LSL
Sbjct: 665 ERLGELSNLRELYLGDNKLKSLSAGLGQLTNLKRLYIYHNQLTRLPAELSKLINLEELSL 724

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
           GGN L ++      L  L  L LS NQL   P  +S L  L+ L L +N+L++LP E+  
Sbjct: 725 GGNKLKNLSVELDQLTNLRILDLSANQLTGWPTKLSKLSNLRELYLGDNQLKSLPAELGQ 784

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L      L+ L L  N+L   P E+  L  ++ L+L+   L
Sbjct: 785 LT----NLQILDLSGNQLTGWPDELSNLSNMTYLNLKGTKL 821



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 80/153 (52%), Gaps = 4/153 (2%)

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           LK+  L  N+++Q P QI  +  L+ L L  N L  VP E+ +L  L  L L  N L  +
Sbjct: 604 LKIVLLYSNEIQQLPPQIGKLVNLQTLDLSFNKLTSVPDELGELSDLQSLVLNSNQLESL 663

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
           P+  G+L  L  L L DN+L+SL A +  L  LK L +++N+L  LP E+  L  L E  
Sbjct: 664 PERLGELSNLRELYLGDNKLKSLSAGLGQLTNLKRLYIYHNQLTRLPAELSKLINLEE-- 721

Query: 248 KSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             L L  NKL+ L  E+  L  L  L L  N L
Sbjct: 722 --LSLGGNKLKNLSVELDQLTNLRILDLSANQL 752



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 67/154 (43%), Gaps = 30/154 (19%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLP---QAITNFPLSTLIARNNLL 113
           N+  L +YHN L+  P   SK  NL  L L  N++ +L      +TN  +  L A  N L
Sbjct: 695 NLKRLYIYHNQLTRLPAELSKLINLEELSLGGNKLKNLSVELDQLTNLRILDLSA--NQL 752

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T    P  +S L NL+                        LYLG+N L  +P E+ +L  
Sbjct: 753 TG--WPTKLSKLSNLRE-----------------------LYLGDNQLKSLPAELGQLTN 787

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQL 207
           L +L L GN LT  PD   +L  +  L L   +L
Sbjct: 788 LQILDLSGNQLTGWPDELSNLSNMTYLNLKGTKL 821


>gi|291232979|ref|XP_002736431.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
          Length = 1196

 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/241 (34%), Positives = 126/241 (52%), Gaps = 15/241 (6%)

Query: 46  LPNNDYNKKPENI----DTLLLY--HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN+    P +I    D  +LY   NNL+  P +  K   L  +D+S+N+I   P  + 
Sbjct: 196 LSNNEIQSLPASIGDMSDLTVLYLDKNNLTTLPSDIKKLHQLERIDVSSNQIEIFPPGLC 255

Query: 100 --NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
             N   S  +A NN+     +P D++NL  L V +L  NQ+   P  + D+  L  L L 
Sbjct: 256 ELNEVTSLRLANNNI---SLIPPDIANLSELLVLDLEYNQIANIPPALCDLKQLVELTLN 312

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
            N L  +P +I KL +L  L L  N L +IP    D+ +L  L L  N L ++P++I NL
Sbjct: 313 INKLTCIPSDIKKLVRLQTLGLSDNQLNEIPPALCDMPKLTKLTLDGNGLSAIPSAIRNL 372

Query: 218 KMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRD 277
           + L+ L L NN +  +P+E++ +  L E    L L +N+L+ +P+EI  L+ L +L L  
Sbjct: 373 RNLQKLDLSNNNISVIPSELLHMNQLIE----LRLGSNQLKCIPSEIGNLQQLEKLDLSH 428

Query: 278 N 278
           N
Sbjct: 429 N 429



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 117/216 (54%), Gaps = 8/216 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L+  P +  K   L++L LS+N++  +P A+ + P L+ L    N L+A  +P  + N
Sbjct: 314 NKLTCIPSDIKKLVRLQTLGLSDNQLNEIPPALCDMPKLTKLTLDGNGLSA--IPSAIRN 371

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+NL+  +LS N +   P ++L +  L  L LG+N L  +P EI  L +L  L L  N  
Sbjct: 372 LRNLQKLDLSNNNISVIPSELLHMNQLIELRLGSNQLKCIPSEIGNLQQLEKLDLSHNEG 431

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
               D+   L +L  L L+ N L S+P ++  LK L+ L +++N ++ +P EI  L  L 
Sbjct: 432 ISGADSLSSLDELSELKLNKNNLRSVP-NMFKLKKLQVLHMNDNLIKEIPEEIQNLYSLK 490

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           E    L L  N+L ++P+EI  L  L ELSL  N L
Sbjct: 491 E----LWLDYNQLTSIPSEIGELTNLRELSLLMNKL 522



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 81/242 (33%), Positives = 124/242 (51%), Gaps = 14/242 (5%)

Query: 40  ATQIELLPNN--DYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQA 97
           + QIE+ P    + N+    + +L L +NN+S  P + +  + L  LDL  N+I ++P A
Sbjct: 244 SNQIEIFPPGLCELNE----VTSLRLANNNISLIPPDIANLSELLVLDLEYNQIANIPPA 299

Query: 98  ITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL 156
           + +   L  L    N LT   +P D+  L  L+   LS NQL + P  + D+P L  L L
Sbjct: 300 LCDLKQLVELTLNINKLTC--IPSDIKKLVRLQTLGLSDNQLNEIPPALCDMPKLTKLTL 357

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
             N L+ +P  I  L  L  L L  N+++ IP     + QL  L L  NQL+ +P+ I N
Sbjct: 358 DGNGLSAIPSAIRNLRNLQKLDLSNNNISVIPSELLHMNQLIELRLGSNQLKCIPSEIGN 417

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           L+ L+ L L +N+  +    + +L  LSE    L L+ N LR++P  +  LK L  L + 
Sbjct: 418 LQQLEKLDLSHNEGISGADSLSSLDELSE----LKLNKNNLRSVPN-MFKLKKLQVLHMN 472

Query: 277 DN 278
           DN
Sbjct: 473 DN 474



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 121/250 (48%), Gaps = 39/250 (15%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM 122
           L   +L   P + S F NLR   L+NN +T                         LP ++
Sbjct: 82  LNKRSLRKLPTSISGFPNLRKCKLANNYLTF------------------------LPTEL 117

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
           S LK LK   L  N+ +Q P+ I  +  L  L + +N L  + + I  L +L  L+L GN
Sbjct: 118 SELKRLKKIELQSNKFDQMPVPIFKLHKLHKLNMADNHLTSINQSITNLKQLRKLNLSGN 177

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            L +I D    L +LE L LS+N+++SLPASI ++  L  L L  N L TLP++I  L  
Sbjct: 178 KLINI-DYITTLLKLEELHLSNNEIQSLPASIGDMSDLTVLYLDKNNLTTLPSDIKKL-- 234

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRT 302
              +L+ + + +N++   P  +  L  ++ L L +N        +++  PP +  L+   
Sbjct: 235 --HQLERIDVSSNQIEIFPPGLCELNEVTSLRLANN--------NISLIPPDIANLSE-- 282

Query: 303 LKVHEIDYSQ 312
           L V +++Y+Q
Sbjct: 283 LLVLDLEYNQ 292



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 73/241 (30%), Positives = 116/241 (48%), Gaps = 29/241 (12%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L +N L+F P   S+   L+ ++L +N+   +P  I     L  L   +N LT  S+ + 
Sbjct: 105 LANNYLTFLPTELSELKRLKKIELQSNKFDQMPVPIFKLHKLHKLNMADNHLT--SINQS 162

Query: 122 MSNLKNLKVFNLSGN----------------------QLEQFPIQILDIPTLKYLYLGNN 159
           ++NLK L+  NLSGN                      +++  P  I D+  L  LYL  N
Sbjct: 163 ITNLKQLRKLNLSGNKLINIDYITTLLKLEELHLSNNEIQSLPASIGDMSDLTVLYLDKN 222

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
           +L  +P +I KL +L  + +  N +   P    +L ++ +L L++N +  +P  I+NL  
Sbjct: 223 NLTTLPSDIKKLHQLERIDVSSNQIEIFPPGLCELNEVTSLRLANNNISLIPPDIANLSE 282

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L  L L  N++  +P  +  LK L E    L L+ NKL  +P++I  L  L  L L DN 
Sbjct: 283 LLVLDLEYNQIANIPPALCDLKQLVE----LTLNINKLTCIPSDIKKLVRLQTLGLSDNQ 338

Query: 280 L 280
           L
Sbjct: 339 L 339



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 56/159 (35%), Positives = 85/159 (53%), Gaps = 6/159 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTAESL 118
           L L  N L   P        L  LDLS+N       ++++   LS L + +NNL    S+
Sbjct: 401 LRLGSNQLKCIPSEIGNLQQLEKLDLSHNEGISGADSLSSLDELSELKLNKNNL---RSV 457

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P +M  LK L+V +++ N +++ P +I ++ +LK L+L  N L  +P EI +L  L  LS
Sbjct: 458 P-NMFKLKKLQVLHMNDNLIKEIPEEIQNLYSLKELWLDYNQLTSIPSEIGELTNLRELS 516

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           L  N LT+I    G L  L  L L  N+L++LP  ++NL
Sbjct: 517 LLMNKLTEITPAIGKLSMLRHLNLEYNKLKTLPEEVNNL 555



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 53/150 (35%), Positives = 78/150 (52%), Gaps = 5/150 (3%)

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NL+   L + P  I   P L+   L NN L  +P E+++L +L  + L  N    +P  
Sbjct: 80  INLNKRSLRKLPTSISGFPNLRKCKLANNYLTFLPTELSELKRLKKIELQSNKFDQMPVP 139

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
              L++L  L ++DN L S+  SI+NLK L+ L L  NKL  +   I TL     KL+ L
Sbjct: 140 IFKLHKLHKLNMADNHLTSINQSITNLKQLRKLNLSGNKLINIDY-ITTLL----KLEEL 194

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            L NN++++LP  I  +  L+ L L  N L
Sbjct: 195 HLSNNEIQSLPASIGDMSDLTVLYLDKNNL 224



 Score = 46.2 bits (108), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 5/131 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLT 114
           + +  L L  NNL   P N  K   L+ L +++N I  +P+ I N + L  L    N LT
Sbjct: 442 DELSELKLNKNNLRSVP-NMFKLKKLQVLHMNDNLIKEIPEEIQNLYSLKELWLDYNQLT 500

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             S+P ++  L NL+  +L  N+L +    I  +  L++L L  N L  +P E+N L   
Sbjct: 501 --SIPSEIGELTNLRELSLLMNKLTEITPAIGKLSMLRHLNLEYNKLKTLPEEVNNLIDC 558

Query: 175 HVLSLGGNSLT 185
            +  L GN ++
Sbjct: 559 DI-RLKGNPMS 568



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 51/105 (48%), Gaps = 4/105 (3%)

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           ++L   SL  +P +      L    L++N L  LP  +S LK LK + L +NK   +P  
Sbjct: 80  INLNKRSLRKLPTSISGFPNLRKCKLANNYLTFLPTELSELKRLKKIELQSNKFDQMPVP 139

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I  L     KL  L + +N L ++   I  LK L +L+L  N L+
Sbjct: 140 IFKL----HKLHKLNMADNHLTSINQSITNLKQLRKLNLSGNKLI 180



 Score = 43.5 bits (101), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 4/83 (4%)

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
           E + L+   L  LP SIS    L+   L NN L  LPTE+  LK    +LK + L +NK 
Sbjct: 78  EEINLNKRSLRKLPTSISGFPNLRKCKLANNYLTFLPTELSELK----RLKKIELQSNKF 133

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
             +P  I  L  L +L++ DN L
Sbjct: 134 DQMPVPIFKLHKLHKLNMADNHL 156


>gi|271962539|ref|YP_003336735.1| hypothetical protein [Streptosporangium roseum DSM 43021]
 gi|270505714|gb|ACZ83992.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 354

 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 84/243 (34%), Positives = 114/243 (46%), Gaps = 30/243 (12%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQ---------------AITNFP----- 102
           L  N L+  P+   +   L  L L  NR+  LP                A+T FP     
Sbjct: 30  LAWNALTELPEWVGRLPRLEDLRLDGNRLRDLPDLHGLTALRALHLDGNALTRFPESVLR 89

Query: 103 ---LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
              L TL    N +    LP+ +  L+ L+   + GN L   P  +  +  L  L L  N
Sbjct: 90  LPELRTLFLYGNAIG--ELPEGIGLLRGLRHLAVGGNALTSVPAGLWRLTGLASLNLAEN 147

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL-EALILSDNQLESLPASISNLK 218
           S+  VP  I +L +L +L LG N+LT IP+  GDL  L + L LSDN+  S+PAS+  L 
Sbjct: 148 SITEVPETIGRLTELRMLDLGHNALTRIPEAIGDLSNLTDYLYLSDNRFTSVPASLGGLT 207

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L  L L +N+L  LP  I  L  L E    L L+ N+LR +P  I  L+ L EL L +N
Sbjct: 208 RLTYLNLTDNRLTDLPAAIGGLTALRE----LRLYGNRLREIPETIGRLRELRELHLMNN 263

Query: 279 PLV 281
            L 
Sbjct: 264 ALT 266



 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 78/215 (36%), Positives = 109/215 (50%), Gaps = 8/215 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSN 124
           N L+ FP++  +   LR+L L  N I  LP+ I     L  L    N LT  S+P  +  
Sbjct: 78  NALTRFPESVLRLPELRTLFLYGNAIGELPEGIGLLRGLRHLAVGGNALT--SVPAGLWR 135

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL-HVLSLGGNS 183
           L  L   NL+ N + + P  I  +  L+ L LG+N+L  +P  I  L  L   L L  N 
Sbjct: 136 LTGLASLNLAENSITEVPETIGRLTELRMLDLGHNALTRIPEAIGDLSNLTDYLYLSDNR 195

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
            T +P + G L +L  L L+DN+L  LPA+I  L  L+ L L+ N+LR +P  I  L+  
Sbjct: 196 FTSVPASLGGLTRLTYLNLTDNRLTDLPAAIGGLTALRELRLYGNRLREIPETIGRLR-- 253

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             +L+ L L NN L  LP  +  L  L  L LR+N
Sbjct: 254 --ELRELHLMNNALTCLPASVGDLSGLRLLDLRNN 286



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/241 (35%), Positives = 119/241 (49%), Gaps = 14/241 (5%)

Query: 48  NNDYNKKPENIDTLL-LYH-----NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
            N   + PE I  L  L H     N L+  P    + T L SL+L+ N IT +P+ I   
Sbjct: 100 GNAIGELPEGIGLLRGLRHLAVGGNALTSVPAGLWRLTGLASLNLAENSITEVPETIGRL 159

Query: 102 -PLSTLIARNNLLTAESLPKDMSNLKNLKVF-NLSGNQLEQFPIQILDIPTLKYLYLGNN 159
             L  L   +N LT   +P+ + +L NL  +  LS N+    P  +  +  L YL L +N
Sbjct: 160 TELRMLDLGHNALT--RIPEAIGDLSNLTDYLYLSDNRFTSVPASLGGLTRLTYLNLTDN 217

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L  +P  I  L  L  L L GN L +IP+T G L +L  L L +N L  LPAS+ +L  
Sbjct: 218 RLTDLPAAIGGLTALRELRLYGNRLREIPETIGRLRELRELHLMNNALTCLPASVGDLSG 277

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L+ L L NN + +LP  +  L     +L  L L NN+LR +P  +  L  L +L LR N 
Sbjct: 278 LRLLDLRNNAITSLPGSLTGLS----RLTHLDLRNNRLREIPGGLADLPALEKLDLRWNK 333

Query: 280 L 280
           L
Sbjct: 334 L 334



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 72/216 (33%), Positives = 111/216 (51%), Gaps = 7/216 (3%)

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNL 125
            L+  P  A     LR +DL+ N +T LP+ +   P L  L    N L    LP D+  L
Sbjct: 11  GLTALPAPAGDPALLRRIDLAWNALTELPEWVGRLPRLEDLRLDGNRL--RDLP-DLHGL 67

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
             L+  +L GN L +FP  +L +P L+ L+L  N++  +P  I  L  L  L++GGN+LT
Sbjct: 68  TALRALHLDGNALTRFPESVLRLPELRTLFLYGNAIGELPEGIGLLRGLRHLAVGGNALT 127

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
            +P     L  L +L L++N +  +P +I  L  L+ L L +N L  +P  I  L  L++
Sbjct: 128 SVPAGLWRLTGLASLNLAENSITEVPETIGRLTELRMLDLGHNALTRIPEAIGDLSNLTD 187

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L    L +N+  ++P  +  L  L+ L+L DN L 
Sbjct: 188 YLY---LSDNRFTSVPASLGGLTRLTYLNLTDNRLT 220



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 70/144 (48%), Gaps = 5/144 (3%)

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
           G  L   P    D   L+ + L  N+L  +P  + +L +L  L L GN L D+PD  G L
Sbjct: 9   GAGLTALPAPAGDPALLRRIDLAWNALTELPEWVGRLPRLEDLRLDGNRLRDLPDLHG-L 67

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
             L AL L  N L   P S+  L  L++L L+ N +  LP  I  L+     L+ L +  
Sbjct: 68  TALRALHLDGNALTRFPESVLRLPELRTLFLYGNAIGELPEGIGLLR----GLRHLAVGG 123

Query: 255 NKLRTLPTEIITLKCLSELSLRDN 278
           N L ++P  +  L  L+ L+L +N
Sbjct: 124 NALTSVPAGLWRLTGLASLNLAEN 147



 Score = 42.7 bits (99), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 36/125 (28%), Positives = 53/125 (42%), Gaps = 18/125 (14%)

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
           H +   G  LT +P   GD   L  + L+ N L  LP  +  L  L+ L L  N+LR LP
Sbjct: 3   HEMKAPGAGLTALPAPAGDPALLRRIDLAWNALTELPEWVGRLPRLEDLRLDGNRLRDLP 62

Query: 235 T--EIITLKCLS----------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
               +  L+ L                  +L++L L+ N +  LP  I  L+ L  L++ 
Sbjct: 63  DLHGLTALRALHLDGNALTRFPESVLRLPELRTLFLYGNAIGELPEGIGLLRGLRHLAVG 122

Query: 277 DNPLV 281
            N L 
Sbjct: 123 GNALT 127


>gi|354483191|ref|XP_003503778.1| PREDICTED: leucine-rich repeat-containing protein 1-like
           [Cricetulus griseus]
          Length = 526

 Score =  108 bits (269), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 119/209 (56%), Gaps = 5/209 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLK+L   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 211 -ELPQEIGNLKSLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETIPDGIGKLKKLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L L  N LT +P+  GD   L  L+L++N+L +LP SI  LK L +L    NKL +LP 
Sbjct: 270 ILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPK 329

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           E+  L C S  L    + NN+L  +P+E+
Sbjct: 330 EVADLGCCS--LTVFCVRNNRLTRIPSEV 356



 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 82/224 (36%), Positives = 116/224 (51%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN++  
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDI-- 94

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+ +S  K L+V + SGN L + P    ++  L  L + + SL  +P  I  L  L
Sbjct: 95  -PEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNL 153

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +PD+   L +LE L L +N++ +LP SI  L  LK L L  N+L  LP
Sbjct: 154 ASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELP 213

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK     L  L +  N+L  LP EI  L  L++L +  N
Sbjct: 214 QEIGNLK----SLLCLDVSENRLERLPEEISGLTSLTDLVISQN 253



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 124/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N++   P++ S    L+  D S N +T LP++  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 126 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 185 EIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKSLLCLDVSENRLERLPEEISGLTS 244

Query: 220 LKSLLLHNNKLRTLP-------------------TEIITLKCLSEKLKSLLLHNNKLRTL 260
           L  L++  N L T+P                   T++       E L  L+L  N+L TL
Sbjct: 245 LTDLVISQNLLETIPDGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTL 304

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK LS L+   N LV
Sbjct: 305 PKSIGKLKKLSNLNADRNKLV 325



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 56/163 (34%), Positives = 83/163 (50%), Gaps = 4/163 (2%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LP+    L  L+   LS N++++ P +I +   L  L +  N +  +P  I+    L V 
Sbjct: 51  LPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQVA 110

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
              GN LT +P++F +L  L  L ++D  L+SLP +I NL  L SL L  N L  LP  +
Sbjct: 111 DFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSL 170

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             L+    +L+ L L NN++  LP  I  L  L +L L  N L
Sbjct: 171 TQLR----RLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQL 209



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 82/259 (31%), Positives = 116/259 (44%), Gaps = 40/259 (15%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN+    PE+I  LL      L  N LS  P       +L  LD+S NR+  LP+ I+
Sbjct: 181 LGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKSLLCLDVSENRLERLPEEIS 240

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L+ L+   NLL  E++P  +  LK L +  L  N+L Q P  I D   L  L L  
Sbjct: 241 GLTSLTDLVISQNLL--ETIPDGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTE 298

Query: 159 NSLNHVPREINKL-------------------------CKLHVLSLGGNSLTDIPDTFGD 193
           N L  +P+ I KL                         C L V  +  N LT IP     
Sbjct: 299 NRLLTLPKSIGKLKKLSNLNADRNKLVSLPKEVADLGCCSLTVFCVRNNRLTRIPSEVSQ 358

Query: 194 LYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT-EIITLKCLSEKLKSLLL 252
             +L  L ++ N+L  LP S++ LK LK+L L +N+ + L T +  T     EK+ + +L
Sbjct: 359 AMELHVLDVAGNRLRHLPLSLTTLK-LKALWLSDNQSQPLLTFQTDTDHTTGEKILTCVL 417

Query: 253 HNNKLRTLPTEIITLKCLS 271
               L  +P+E I  + LS
Sbjct: 418 ----LPQMPSEPICQESLS 432


>gi|26349893|dbj|BAC38586.1| unnamed protein product [Mus musculus]
          Length = 443

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 91/242 (37%), Positives = 132/242 (54%), Gaps = 23/242 (9%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 71  NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS- 129

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L YL +  N L  +P  I KL KL 
Sbjct: 130 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLS 188

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L L  N LT +P+  GD   L  L+L++N+L +LP SI  LK L +L    NKL +LP 
Sbjct: 189 ILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPK 248

Query: 236 EI-----ITLKCL---------SEKLKSLLLH-----NNKLRTLPTEIITLKCLSELSLR 276
           EI     +T+ C+         +E  +++ LH      NKL  LP  + TLK L  L L 
Sbjct: 249 EIGGCCSLTMFCIRDNRLTRLPAEVSQAVELHVLDVAGNKLHHLPLSLTTLK-LKALWLS 307

Query: 277 DN 278
           DN
Sbjct: 308 DN 309



 Score = 90.1 bits (222), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/236 (31%), Positives = 115/236 (48%), Gaps = 20/236 (8%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSN 124
            N++   P++ +    L+  D S + +T LP++       T ++ N++ + +SLP+++ N
Sbjct: 10  RNDIPEIPESIAFCKALQVADFSGDPLTRLPESFPELQNLTCLSVNDI-SLQSLPENIGN 68

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L NL    L  N L   P  +  +  L+ L LGNN + ++P  I  L  L  L L GN L
Sbjct: 69  LYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQL 128

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP---------- 234
           +++P   G+L  L  L +S+N+LE LP  IS L  L  L++  N L T+P          
Sbjct: 129 SELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLS 188

Query: 235 ---------TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                    T++       E L  L+L  N+L TLP  I  LK LS L+   N LV
Sbjct: 189 ILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLV 244



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 96/218 (44%), Gaps = 29/218 (13%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN+    PE+I  LL      L  N LS  P       NL  LD+S NR+  LP+ I+
Sbjct: 100 LGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS 159

Query: 100 NF-PLSTLIARNNLLTA---------------------ESLPKDMSNLKNLKVFNLSGNQ 137
               L+ L+   NLL                         LP+ + + +NL    L+ N+
Sbjct: 160 GLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENR 219

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           L   P  I  +  L  L    N L  +P+EI   C L +  +  N LT +P       +L
Sbjct: 220 LLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTMFCIRDNRLTRLPAEVSQAVEL 279

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
             L ++ N+L  LP S++ LK LK+L L +N+ + L T
Sbjct: 280 HVLDVAGNKLHHLPLSLTTLK-LKALWLSDNQSQPLLT 316



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 80/165 (48%), Gaps = 9/165 (5%)

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            ++S N + + P  I     L+      + L  +P    +L  L  LS+   SL  +P+ 
Sbjct: 6   LDVSRNDIPEIPESIAFCKALQVADFSGDPLTRLPESFPELQNLTCLSVNDISLQSLPEN 65

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
            G+LY L +L L +N L  LP S++ L+ L+ L L NN++  LP  I  L      LK L
Sbjct: 66  IGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALL----HLKDL 121

Query: 251 LLHNNKLRTLPTEIITLK---CL--SELSLRDNPLVIRFVSDMTY 290
            L  N+L  LP EI  LK   CL  SE  L   P  I  ++ +TY
Sbjct: 122 WLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTY 166


>gi|379728469|ref|YP_005320665.1| putative lipoprotein [Saprospira grandis str. Lewin]
 gi|378574080|gb|AFC23081.1| putative lipoprotein [Saprospira grandis str. Lewin]
          Length = 484

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 93/267 (34%), Positives = 136/267 (50%), Gaps = 20/267 (7%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIAR--NNLLTA 115
           ++ L L +N LSF P N      L++L L+ N++  LP ++       L+    N+L   
Sbjct: 199 LEELALENNLLSFLPSNFGGLVALKTLVLAENQLDQLPASLGQLKQLELLELQDNDL--- 255

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP  +  L++L   +LS N L+Q P +I  +  LK L++  N L  +P E  +L  L 
Sbjct: 256 GQLPAQIGQLQSLVELDLSDNFLQQLPPEIGQLQALKSLFITENELQQLPAEFAQLKNLQ 315

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +P  FG L QLE L LS+N+LE+LP SI  LK L SL L NN++   P 
Sbjct: 316 ELQLQENKLTALPRNFGKLSQLEELQLSENKLEALPKSIKRLKKLSSLNLSNNEIYLFPK 375

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
               +K     L +L L  N +  LP EI  L+ L  L L DN        ++   PP L
Sbjct: 376 NASGIK----NLIALDLEGNYIEELPEEIQELQNLEFLILYDN--------ELRNLPPYL 423

Query: 296 LELAS-RTLKVHEIDYSQEHLPQNLVQ 321
            +L++ R L + + ++  E  P+ L Q
Sbjct: 424 QDLSALRRLDISDNEF--EAFPEVLYQ 448



 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 86/229 (37%), Positives = 121/229 (52%), Gaps = 11/229 (4%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           +N++ L+L    +   P +  +  NLR LDL N ++  LP+ +    L  L A N  L+A
Sbjct: 105 QNLEVLILNSTGIKRLPASIGQLQNLRILDLGNCQLQQLPEGLGQ--LQALEALN--LSA 160

Query: 116 ---ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
              E LP  +  L+ LK+ +LS N+L++ P +   +  L+ L L NN L+ +P     L 
Sbjct: 161 NQLEELPPSIGQLQALKMADLSSNRLQELPNEFSQLTQLEELALENNLLSFLPSNFGGLV 220

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N L  +P + G L QLE L L DN L  LPA I  L+ L  L L +N L+ 
Sbjct: 221 ALKTLVLAENQLDQLPASLGQLKQLELLELQDNDLGQLPAQIGQLQSLVELDLSDNFLQQ 280

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP EI  L+     LKSL +  N+L+ LP E   LK L EL L++N L 
Sbjct: 281 LPPEIGQLQA----LKSLFITENELQQLPAEFAQLKNLQELQLQENKLT 325



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 109/228 (47%), Gaps = 15/228 (6%)

Query: 48  NNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           +ND  + P  I  L       L  N L   P    +   L+SL ++ N +  LP      
Sbjct: 252 DNDLGQLPAQIGQLQSLVELDLSDNFLQQLPPEIGQLQALKSLFITENELQQLPAEFAQL 311

Query: 102 P-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
             L  L  + N LTA  LP++   L  L+   LS N+LE  P  I  +  L  L L NN 
Sbjct: 312 KNLQELQLQENKLTA--LPRNFGKLSQLEELQLSENKLEALPKSIKRLKKLSSLNLSNNE 369

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           +   P+  + +  L  L L GN + ++P+   +L  LE LIL DN+L +LP  + +L  L
Sbjct: 370 IYLFPKNASGIKNLIALDLEGNYIEELPEEIQELQNLEFLILYDNELRNLPPYLQDLSAL 429

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLK 268
           + L + +N+    P  +  ++    +LK L+L+ ++    PT+I TLK
Sbjct: 430 RRLDISDNEFEAFPEVLYQMR----QLKDLILNVDQFE--PTKIQTLK 471



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 99/222 (44%), Gaps = 30/222 (13%)

Query: 59  DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESL 118
           +++LL   N+S  P   +K    + LDL + R                     LL AE L
Sbjct: 14  NSILLAQLNMSAAPSGQAKAVKEQYLDLEDGR--------------------RLLQAERL 53

Query: 119 PK-DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL-GNNSLNHVPREINKLCKLHV 176
              D+S     +   L   +L   P  I     L+YL L G  +L  +P EI +L  L V
Sbjct: 54  ADLDIS----YQALVLEEEELSSLPATIGQYSELRYLSLWGQEALEELPEEIGQLQNLEV 109

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L    +  +P + G L  L  L L + QL+ LP  +  L+ L++L L  N+L  LP  
Sbjct: 110 LILNSTGIKRLPASIGQLQNLRILDLGNCQLQQLPEGLGQLQALEALNLSANQLEELPPS 169

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           I  L+     LK   L +N+L+ LP E   L  L EL+L +N
Sbjct: 170 IGQLQA----LKMADLSSNRLQELPNEFSQLTQLEELALENN 207


>gi|417781513|ref|ZP_12429262.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410778244|gb|EKR62873.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 348

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 87/247 (35%), Positives = 125/247 (50%), Gaps = 22/247 (8%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K  N++TL+L  N L   P+   +  NL +LDL  N++  LP  I     L  L    N 
Sbjct: 61  KLRNLETLILAENILKTIPNEIEQLQNLATLDLYENKLKVLPNEIGKLENLKELNLSGNQ 120

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT   LP  +  L+NL++  L  NQL   P +I+ + +L+ L L  N +  +P+EI++L 
Sbjct: 121 LTV--LPPSIGQLQNLEILELFRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQLS 178

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L LG N +  +   F  L  L++L L DN+LE+ PA I  LK L+ L L+ N+ + 
Sbjct: 179 NLIWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKI 238

Query: 233 LPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           LP EI+ L+ L                    EKL+SL L  N+L TLP  I  L+ L  +
Sbjct: 239 LPEEILQLENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIEHLRSLKIV 298

Query: 274 SLRDNPL 280
            L  N L
Sbjct: 299 HLEQNRL 305



 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 73/194 (37%), Positives = 109/194 (56%), Gaps = 9/194 (4%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI----ARNN 111
           +N++ L L+ N L+  P+      +L+ L+L  N I  LP+ I+   LS LI     +N 
Sbjct: 132 QNLEILELFRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQ--LSNLIWLDLGKNK 189

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
           +   + L  D   L+NLK  NL  N+LE FP  I+ + +L++L L  N    +P EI +L
Sbjct: 190 I---KRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEILQL 246

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L VL L GN LT +P+  G L +LE+L L  N+L +LP  I +L+ LK + L  N+L 
Sbjct: 247 ENLQVLELTGNQLTSLPEGIGRLEKLESLFLEGNRLTTLPKGIEHLRSLKIVHLEQNRLT 306

Query: 232 TLPTEIITLKCLSE 245
            +P EI +L+ L E
Sbjct: 307 AIPEEIGSLQNLKE 320



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 126/247 (51%), Gaps = 32/247 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLL 113
           +N+ TL LY N L   P+   K  NL+ L+LS N++T LP +I     L  L + RN L 
Sbjct: 86  QNLATLDLYENKLKVLPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELFRNQLA 145

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG---------------- 157
           T   LP+++  LK+L++ NL  N+++  P +I  +  L +L LG                
Sbjct: 146 T---LPEEIVGLKSLQILNLFENEIKSLPKEISQLSNLIWLDLGKNKIKRLSLDFKRLQN 202

Query: 158 -------NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
                  +N L + P +I +L  L  L+L  N    +P+    L  L+ L L+ NQL SL
Sbjct: 203 LKSLNLLDNKLENFPADIVQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSL 262

Query: 211 PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
           P  I  L+ L+SL L  N+L TLP  I  L+ L    K + L  N+L  +P EI +L+ L
Sbjct: 263 PEGIGRLEKLESLFLEGNRLTTLPKGIEHLRSL----KIVHLEQNRLTAIPEEIGSLQNL 318

Query: 271 SELSLRD 277
            EL L+D
Sbjct: 319 KELYLQD 325



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 91/234 (38%), Positives = 121/234 (51%), Gaps = 25/234 (10%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
           HNNL     N S+   +R LD+S+  +  LP+ I  F  L  LI   N LTA  +PK++ 
Sbjct: 6   HNNLEKSLQNPSE---VRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTA--IPKEIG 60

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            L+NL+   L+ N L+  P +I  +  L  L L  N L  +P EI KL  L  L+L GN 
Sbjct: 61  KLRNLETLILAENILKTIPNEIEQLQNLATLDLYENKLKVLPNEIGKLENLKELNLSGNQ 120

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL--- 240
           LT +P + G L  LE L L  NQL +LP  I  LK L+ L L  N++++LP EI  L   
Sbjct: 121 LTVLPPSIGQLQNLEILELFRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNL 180

Query: 241 ----------KCLS------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
                     K LS      + LKSL L +NKL   P +I+ LK L  L+L  N
Sbjct: 181 IWLDLGKNKIKRLSLDFKRLQNLKSLNLLDNKLENFPADIVQLKSLEFLNLNYN 234



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 90/165 (54%), Gaps = 4/165 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           E+LP+++   +NL+   L GN+L   P +I  +  L+ L L  N L  +P EI +L  L 
Sbjct: 30  ETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKLRNLETLILAENILKTIPNEIEQLQNLA 89

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L  +P+  G L  L+ L LS NQL  LP SI  L+ L+ L L  N+L TLP 
Sbjct: 90  TLDLYENKLKVLPNEIGKLENLKELNLSGNQLTVLPPSIGQLQNLEILELFRNQLATLPE 149

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI+ LK     L+ L L  N++++LP EI  L  L  L L  N +
Sbjct: 150 EIVGLKS----LQILNLFENEIKSLPKEISQLSNLIWLDLGKNKI 190



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 68/201 (33%), Positives = 101/201 (50%), Gaps = 14/201 (6%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +L K + N   +++ ++S  +LE  P +I     L+ L L  N L  +P+EI KL  L  
Sbjct: 8   NLEKSLQNPSEVRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKLRNLET 67

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L  IP+    L  L  L L +N+L+ LP  I  L+ LK L L  N+L  LP  
Sbjct: 68  LILAENILKTIPNEIEQLQNLATLDLYENKLKVLPNEIGKLENLKELNLSGNQLTVLPPS 127

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN-----PLVIRFVSDMTYK 291
           I  L    + L+ L L  N+L TLP EI+ LK L  L+L +N     P  I  +S++ + 
Sbjct: 128 IGQL----QNLEILELFRNQLATLPEEIVGLKSLQILNLFENEIKSLPKEISQLSNLIW- 182

Query: 292 PPSLLELASRTLKVHEIDYSQ 312
               L+L    +K   +D+ +
Sbjct: 183 ----LDLGKNKIKRLSLDFKR 199



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/160 (32%), Positives = 88/160 (55%), Gaps = 15/160 (9%)

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
           N++ + +    ++ +L +    L  +P+  G    LE LIL  N+L ++P  I  L+ L+
Sbjct: 7   NNLEKSLQNPSEVRILDVSSQELETLPEEIGTFQNLEKLILFGNRLTAIPKEIGKLRNLE 66

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +L+L  N L+T+P EI  L+ L+    +L L+ NKL+ LP EI  L+ L EL+L  N   
Sbjct: 67  TLILAENILKTIPNEIEQLQNLA----TLDLYENKLKVLPNEIGKLENLKELNLSGN--- 119

Query: 282 IRFVSDMTYKPPSLLELASRTLKVHEIDYSQ-EHLPQNLV 320
                 +T  PPS+ +L  + L++ E+  +Q   LP+ +V
Sbjct: 120 -----QLTVLPPSIGQL--QNLEILELFRNQLATLPEEIV 152


>gi|46445672|ref|YP_007037.1| hypothetical protein pc0038 [Candidatus Protochlamydia amoebophila
           UWE25]
 gi|46399313|emb|CAF22762.1| conserved hypothetical protein [Candidatus Protochlamydia
           amoebophila UWE25]
          Length = 953

 Score =  108 bits (269), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 77/206 (37%), Positives = 112/206 (54%), Gaps = 7/206 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+  L L +N L   P +  K T L+ L ++ N++  LP+  TN   L TL   NN L  
Sbjct: 363 NLTKLYLNNNKLELLPTSFGKLTQLKKLQIAYNQLQSLPELFTNLINLQTLDLNNNNL-- 420

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LP    NL  L V NLS NQL+  P    ++  L+ L++  N L  +P  +  L  L 
Sbjct: 421 RTLPDSFGNLNRLHVLNLSNNQLQVLPHSFGNLTQLRDLHIAYNQLQSLPGSLTNLVNLQ 480

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N+L  +P++FG+L Q+  L L++NQ  SLP S  NL  L+ L L+NN+++ LP 
Sbjct: 481 TLDLNNNNLQTLPNSFGNLNQINYLNLANNQFHSLPESFGNLTKLQCLYLYNNQIQILPE 540

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLP 261
               L  L+E    L L+ N+L+TLP
Sbjct: 541 TFSNLINLTE----LHLNYNQLQTLP 562



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 77/238 (32%), Positives = 111/238 (46%), Gaps = 26/238 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL-------- 113
           L   N+   P +     NL  L+L NN++  LP +  N   L  L   NN L        
Sbjct: 277 LTEKNIQLLPSSFGNLINLFFLNLINNQLQTLPDSFGNLTNLQFLYLYNNKLELLPTSFG 336

Query: 114 -------------TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                          + LP+   NL NL    L+ N+LE  P     +  LK L +  N 
Sbjct: 337 NLNQLNKLNLANNQLQILPQFFGNLTNLTKLYLNNNKLELLPTSFGKLTQLKKLQIAYNQ 396

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P     L  L  L L  N+L  +PD+FG+L +L  L LS+NQL+ LP S  NL  L
Sbjct: 397 LQSLPELFTNLINLQTLDLNNNNLRTLPDSFGNLNRLHVLNLSNNQLQVLPHSFGNLTQL 456

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           + L +  N+L++LP  +  L      L++L L+NN L+TLP     L  ++ L+L +N
Sbjct: 457 RDLHIAYNQLQSLPGSLTNLV----NLQTLDLNNNNLQTLPNSFGNLNQINYLNLANN 510



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 67/182 (36%), Positives = 99/182 (54%), Gaps = 9/182 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTL----IARNNL 112
           N+ TL L +NNL   PD+      L  L+LSNN++  LP +  N  L+ L    IA N L
Sbjct: 409 NLQTLDLNNNNLRTLPDSFGNLNRLHVLNLSNNQLQVLPHSFGN--LTQLRDLHIAYNQL 466

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
              +SLP  ++NL NL+  +L+ N L+  P    ++  + YL L NN  + +P     L 
Sbjct: 467 ---QSLPGSLTNLVNLQTLDLNNNNLQTLPNSFGNLNQINYLNLANNQFHSLPESFGNLT 523

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  L L  N +  +P+TF +L  L  L L+ NQL++LP + +NL  L++L L  N   T
Sbjct: 524 KLQCLYLYNNQIQILPETFSNLINLTELHLNYNQLQTLPETFTNLTNLRNLNLTGNNFET 583

Query: 233 LP 234
           +P
Sbjct: 584 IP 585



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/186 (34%), Positives = 87/186 (46%), Gaps = 27/186 (14%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL---------------- 161
           LP    NL NL   NL  NQL+  P    ++  L++LYL NN L                
Sbjct: 285 LPSSFGNLINLFFLNLINNQLQTLPDSFGNLTNLQFLYLYNNKLELLPTSFGNLNQLNKL 344

Query: 162 -------NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASI 214
                    +P+    L  L  L L  N L  +P +FG L QL+ L ++ NQL+SLP   
Sbjct: 345 NLANNQLQILPQFFGNLTNLTKLYLNNNKLELLPTSFGKLTQLKKLQIAYNQLQSLPELF 404

Query: 215 SNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           +NL  L++L L+NN LRTLP     L     +L  L L NN+L+ LP     L  L +L 
Sbjct: 405 TNLINLQTLDLNNNNLRTLPDSFGNLN----RLHVLNLSNNQLQVLPHSFGNLTQLRDLH 460

Query: 275 LRDNPL 280
           +  N L
Sbjct: 461 IAYNQL 466



 Score = 61.2 bits (147), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 118/291 (40%), Gaps = 73/291 (25%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI-ARNNLLTAESLPK- 120
           L +N L   P++    TNLRSL+L NN+ + +P  +   P +  I  + N L+ E L + 
Sbjct: 157 LTNNQLQTLPNSFENLTNLRSLNLCNNQFSEIPDCLFRLPSACDINLKENPLSQEILDQL 216

Query: 121 ----DMSNLKNLKVFNLSG-----------------------NQLEQFPIQILDIPTLKY 153
               + +N +  K F +S                        + L QF  +  +I     
Sbjct: 217 NQRVNQTNYQGPK-FQVSSPTPSFCSELMDQIIPRSEPILLDDALAQF-CRFFEIHDTSM 274

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           + L   ++  +P     L  L  L+L  N L  +PD+FG+L  L+ L L +N+LE LP S
Sbjct: 275 ISLTEKNIQLLPSSFGNLINLFFLNLINNQLQTLPDSFGNLTNLQFLYLYNNKLELLPTS 334

Query: 214 -----------------------ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE----- 245
                                    NL  L  L L+NNKL  LPT    L  L +     
Sbjct: 335 FGNLNQLNKLNLANNQLQILPQFFGNLTNLTKLYLNNNKLELLPTSFGKLTQLKKLQIAY 394

Query: 246 --------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
                          L++L L+NN LRTLP     L  L  L+L +N L +
Sbjct: 395 NQLQSLPELFTNLINLQTLDLNNNNLRTLPDSFGNLNRLHVLNLSNNQLQV 445



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 73/294 (24%), Positives = 108/294 (36%), Gaps = 94/294 (31%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           N   + L   NL   P +      L  LDL+NN++                        +
Sbjct: 128 NTRIISLAEKNLHILPSSFGNLNQLNHLDLTNNQL------------------------Q 163

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNH------------- 163
           +LP    NL NL+  NL  NQ  + P  +  +P+   + L  N L+              
Sbjct: 164 TLPNSFENLTNLRSLNLCNNQFSEIPDCLFRLPSACDINLKENPLSQEILDQLNQRVNQT 223

Query: 164 ------------------------VPRE--------INKLCKLH------VLSLGGNSLT 185
                                   +PR         + + C+        ++SL   ++ 
Sbjct: 224 NYQGPKFQVSSPTPSFCSELMDQIIPRSEPILLDDALAQFCRFFEIHDTSMISLTEKNIQ 283

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI-------- 237
            +P +FG+L  L  L L +NQL++LP S  NL  L+ L L+NNKL  LPT          
Sbjct: 284 LLPSSFGNLINLFFLNLINNQLQTLPDSFGNLTNLQFLYLYNNKLELLPTSFGNLNQLNK 343

Query: 238 -----ITLKCLSE------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
                  L+ L +       L  L L+NNKL  LPT    L  L +L +  N L
Sbjct: 344 LNLANNQLQILPQFFGNLTNLTKLYLNNNKLELLPTSFGKLTQLKKLQIAYNQL 397



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 45/74 (60%), Gaps = 6/74 (8%)

Query: 167 EINKLCKL------HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           E+ + CK+       ++SL   +L  +P +FG+L QL  L L++NQL++LP S  NL  L
Sbjct: 116 ELAQFCKIFEIYNTRIISLAEKNLHILPSSFGNLNQLNHLDLTNNQLQTLPNSFENLTNL 175

Query: 221 KSLLLHNNKLRTLP 234
           +SL L NN+   +P
Sbjct: 176 RSLNLCNNQFSEIP 189



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 4/88 (4%)

Query: 193 DLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLL 252
           ++Y    + L++  L  LP+S  NL  L  L L NN+L+TLP     L      L+SL L
Sbjct: 125 EIYNTRIISLAEKNLHILPSSFGNLNQLNHLDLTNNQLQTLPNSFENLT----NLRSLNL 180

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDNPL 280
            NN+   +P  +  L    +++L++NPL
Sbjct: 181 CNNQFSEIPDCLFRLPSACDINLKENPL 208


>gi|225690587|ref|NP_001139520.1| leucine-rich repeat-containing protein 1 isoform 1 [Mus musculus]
 gi|50400985|sp|Q80VQ1.2|LRRC1_MOUSE RecName: Full=Leucine-rich repeat-containing protein 1
 gi|56270287|gb|AAH87542.1| Lrrc1 protein [Mus musculus]
 gi|74151056|dbj|BAE27656.1| unnamed protein product [Mus musculus]
 gi|148694402|gb|EDL26349.1| leucine rich repeat containing 1, isoform CRA_a [Mus musculus]
          Length = 524

 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 118/209 (56%), Gaps = 7/209 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L YL +  N L  +P  I KL KL 
Sbjct: 211 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L L  N LT +P+  GD   L  L+L++N+L +LP SI  LK L +L    NKL +LP 
Sbjct: 270 ILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPK 329

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           EI    C S  L    + +N+L  LP E+
Sbjct: 330 EIG--GCCS--LTMFCIRDNRLTRLPAEV 354



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 115/224 (51%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN++  
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDI-- 94

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+ ++  K L+V + SGN L + P    ++  L  L + + SL  +P  I  L  L
Sbjct: 95  -PEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNL 153

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +PD+   L +LE L L +N++ +LP SI  L  LK L L  N+L  LP
Sbjct: 154 ASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELP 213

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK     L  L +  N+L  LP EI  L  L+ L +  N
Sbjct: 214 QEIGNLK----NLLCLDVSENRLERLPEEISGLTSLTYLVISQN 253



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 124/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N++   P++ +    L+  D S N +T LP++  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 126 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 185 EIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 244

Query: 220 LKSLLLHNNKLRTLP-------------------TEIITLKCLSEKLKSLLLHNNKLRTL 260
           L  L++  N L T+P                   T++       E L  L+L  N+L TL
Sbjct: 245 LTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTL 304

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK LS L+   N LV
Sbjct: 305 PKSIGKLKKLSNLNADRNKLV 325



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 74/238 (31%), Positives = 110/238 (46%), Gaps = 30/238 (12%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ ++D  +  + ++P+ I  +   L  L+   N L    LP+    L  L+   LS N+
Sbjct: 13  HVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQL--RELPEQFFQLVKLRKLGLSDNE 70

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK-LHVLSLGGNSLTDIPDTFGDLYQ 196
           +++ P +I +   L  L +  N +  +P  I   CK L V    GN LT +P++F +L  
Sbjct: 71  IQRLPPEIANFMQLVELDVSRNDIPEIPESI-AFCKALQVADFSGNPLTRLPESFPELQN 129

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE----------- 245
           L  L ++D  L+SLP +I NL  L SL L  N L  LP  +  L+ L E           
Sbjct: 130 LTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNL 189

Query: 246 --------KLKSLLLHNNKLRTLPTEIITLK---CL--SELSLRDNPLVIRFVSDMTY 290
                    LK L L  N+L  LP EI  LK   CL  SE  L   P  I  ++ +TY
Sbjct: 190 PESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTY 247



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 96/218 (44%), Gaps = 29/218 (13%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN+    PE+I  LL      L  N LS  P       NL  LD+S NR+  LP+ I+
Sbjct: 181 LGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS 240

Query: 100 NF-PLSTLIARNNLLTA---------------------ESLPKDMSNLKNLKVFNLSGNQ 137
               L+ L+   NLL                         LP+ + + +NL    L+ N+
Sbjct: 241 GLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENR 300

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           L   P  I  +  L  L    N L  +P+EI   C L +  +  N LT +P       +L
Sbjct: 301 LLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTMFCIRDNRLTRLPAEVSQAVEL 360

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
             L ++ N+L  LP S++ LK LK+L L +N+ + L T
Sbjct: 361 HVLDVAGNRLHHLPLSLTTLK-LKALWLSDNQSQPLLT 397


>gi|455790645|gb|EMF42500.1| leucine rich repeat protein [Leptospira interrogans serovar Lora
           str. TE 1992]
          Length = 230

 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 74/191 (38%), Positives = 108/191 (56%), Gaps = 5/191 (2%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARN 110
           K P  +  L L    L+  P    +  NL  L+L +N++T+LP+ I     L  L I RN
Sbjct: 43  KTPNEVRILDLSRKQLTTLPKEIGQLVNLERLNLRDNKLTNLPEEIGELENLKILDITRN 102

Query: 111 NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
            + T    PK+   LKNL+V  L+GN L   P +I ++  LK L +  N ++  P+E  K
Sbjct: 103 KIST---FPKEFWKLKNLEVLLLNGNSLSNLPEEIGELENLKILDITRNKISTFPKEFWK 159

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L VL L GNSL+++P+  G+L +L  L L++NQL +LP  I  L+ L SL L +NKL
Sbjct: 160 LKNLEVLLLNGNSLSNLPEEIGELEKLGILYLNNNQLTTLPKEIGQLENLVSLSLSSNKL 219

Query: 231 RTLPTEIITLK 241
            ++P E+  LK
Sbjct: 220 TSIPDELGQLK 230



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/189 (39%), Positives = 111/189 (58%), Gaps = 7/189 (3%)

Query: 81  LRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
           +R LDLS  ++T LP+ I     L  L  R+N LT  +LP+++  L+NLK+ +++ N++ 
Sbjct: 48  VRILDLSRKQLTTLPKEIGQLVNLERLNLRDNKLT--NLPEEIGELENLKILDITRNKIS 105

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
            FP +   +  L+ L L  NSL+++P EI +L  L +L +  N ++  P  F  L  LE 
Sbjct: 106 TFPKEFWKLKNLEVLLLNGNSLSNLPEEIGELENLKILDITRNKISTFPKEFWKLKNLEV 165

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRT 259
           L+L+ N L +LP  I  L+ L  L L+NN+L TLP EI  L    E L SL L +NKL +
Sbjct: 166 LLLNGNSLSNLPEEIGELEKLGILYLNNNQLTTLPKEIGQL----ENLVSLSLSSNKLTS 221

Query: 260 LPTEIITLK 268
           +P E+  LK
Sbjct: 222 IPDELGQLK 230



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 62/172 (36%), Positives = 86/172 (50%), Gaps = 19/172 (11%)

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           +++ +LS  QL   P +I  +  L+ L L +N L ++P EI +L  L +L +  N ++  
Sbjct: 48  VRILDLSRKQLTTLPKEIGQLVNLERLNLRDNKLTNLPEEIGELENLKILDITRNKISTF 107

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS--- 244
           P  F  L  LE L+L+ N L +LP  I  L+ LK L +  NK+ T P E   LK L    
Sbjct: 108 PKEFWKLKNLEVLLLNGNSLSNLPEEIGELENLKILDITRNKISTFPKEFWKLKNLEVLL 167

Query: 245 ----------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
                           EKL  L L+NN+L TLP EI  L+ L  LSL  N L
Sbjct: 168 LNGNSLSNLPEEIGELEKLGILYLNNNQLTTLPKEIGQLENLVSLSLSSNKL 219


>gi|418701530|ref|ZP_13262455.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
 gi|410759612|gb|EKR25824.1| leucine rich repeat protein [Leptospira interrogans serovar
           Bataviae str. L1111]
          Length = 423

 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 92/249 (36%), Positives = 124/249 (49%), Gaps = 30/249 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L   P    +  +L++LDL+NN  T + + +     L  L  R+N L 
Sbjct: 156 QNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKL- 214

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN--------------- 159
            +++PK++  LK+LKV  L+GNQL   P +I  +  LK L LG N               
Sbjct: 215 -KTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNL 273

Query: 160 --------SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
                    L   P+E+ +L  L  LSL  N +T +P     L  L+ L LS N++  LP
Sbjct: 274 LELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILP 333

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             I  LK L+ L L NNKL  LP EI  LK    KL+ L L NN+L TLP EI  LK L 
Sbjct: 334 KEILQLKNLEWLSLSNNKLNALPKEIGQLK----KLQRLELGNNQLTTLPKEIEQLKNLQ 389

Query: 272 ELSLRDNPL 280
            L L  NP+
Sbjct: 390 RLELDSNPI 398



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 123/247 (49%), Gaps = 22/247 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +++  L L +N L+  P    +  NL+ L L +N + +LP+ I  F  L  L   NN LT
Sbjct: 87  KDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLT 146

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+  +L  N+L   P +I  + +LK L L NN    V +E+  L  L
Sbjct: 147 V--LPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETL 204

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  IP     L  L+ L+L+ NQL SLP  I  L+ LK+L L  N+ +  P
Sbjct: 205 ENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFP 264

Query: 235 TEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            EI+ LK L                    + LK L L++N++ TLP E+  L  L EL L
Sbjct: 265 VEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHL 324

Query: 276 RDNPLVI 282
             N + I
Sbjct: 325 SGNKITI 331



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 95/164 (57%), Gaps = 4/164 (2%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           L K++  LK+L+  NL+ N+L   P +I  +  L+ L L +N L ++P+EI +   L  L
Sbjct: 79  LSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKL 138

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
           +L  N LT +P   G L  L+ L L  N+L SLP  I  LK LK+L L+NN+  T+  E+
Sbjct: 139 NLDNNKLTVLPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEV 198

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           + L    E L++L L +NKL+T+P EI  LK L  L L  N L 
Sbjct: 199 MLL----ETLENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLT 238



 Score = 73.6 bits (179), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/135 (42%), Positives = 73/135 (54%), Gaps = 4/135 (2%)

Query: 144 QILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILS 203
           +I  +  L+ L LG N    + +EI +L  L  L+L  N LT +P   G L  L+ L L 
Sbjct: 59  KIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKLTVLPKEIGQLQNLQELSLH 118

Query: 204 DNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTE 263
            N+L +LP  I   K L+ L L NNKL  LP EI  L+ L E    L L +NKL +LPTE
Sbjct: 119 SNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQNLQE----LSLLSNKLISLPTE 174

Query: 264 IITLKCLSELSLRDN 278
           I  LK L  L L +N
Sbjct: 175 IEQLKSLKNLDLNNN 189



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 3/123 (2%)

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDM 122
           Y+N L  FP    +  +L+ L L +N+IT LP  +T  P L  L    N +T   LPK++
Sbjct: 279 YYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITI--LPKEI 336

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             LKNL+  +LS N+L   P +I  +  L+ L LGNN L  +P+EI +L  L  L L  N
Sbjct: 337 LQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSN 396

Query: 183 SLT 185
            ++
Sbjct: 397 PIS 399



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 5/113 (4%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           LYHN ++  P   ++  +L+ L LS N+IT LP+ I     L  L   NN L A  LPK+
Sbjct: 301 LYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNA--LPKE 358

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           +  LK L+   L  NQL   P +I  +  L+ L L +N ++  P+E  ++ KL
Sbjct: 359 IGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS--PKEKERIRKL 409


>gi|417772084|ref|ZP_12419974.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|418680513|ref|ZP_13241762.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|418702821|ref|ZP_13263713.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|421115678|ref|ZP_15576078.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|400327871|gb|EJO80111.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Kennewicki LC82-25]
 gi|409946041|gb|EKN96055.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Pomona]
 gi|410012750|gb|EKO70841.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. Fiocruz LV133]
 gi|410767365|gb|EKR38040.1| leucine rich repeat protein [Leptospira interrogans serovar
           Hebdomadis str. R499]
 gi|455669508|gb|EMF34619.1| leucine rich repeat protein [Leptospira interrogans serovar Pomona
           str. Fox 32256]
          Length = 423

 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 92/249 (36%), Positives = 124/249 (49%), Gaps = 30/249 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L   P    +  +L++LDL+NN  T + + +     L  L  R+N L 
Sbjct: 156 QNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKL- 214

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN--------------- 159
            +++PK++  LK+LKV  L+GNQL   P +I  +  LK L LG N               
Sbjct: 215 -KTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNL 273

Query: 160 --------SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
                    L   P+E+ +L  L  LSL  N +T +P     L  L+ L LS N++  LP
Sbjct: 274 LELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILP 333

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             I  LK L+ L L NNKL  LP EI  LK    KL+ L L NN+L TLP EI  LK L 
Sbjct: 334 KEILQLKNLEWLSLSNNKLNALPKEIGQLK----KLQRLELGNNQLTTLPKEIEQLKNLQ 389

Query: 272 ELSLRDNPL 280
            L L  NP+
Sbjct: 390 RLELDSNPI 398



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 119/229 (51%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L L    L   P+   +  NL+ LDL  N  T L + I     L  L   NN L
Sbjct: 40  PADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKL 99

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++  L+NL+  +L  N+L   P +I     L+ L L NN L  +P+EI +L  
Sbjct: 100 TV--LPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQN 157

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  LSL  N L  +P     L  L+ L L++N+  ++   +  L+ L++L L +NKL+T+
Sbjct: 158 LQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTI 217

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK     LK L+L  N+L +LP EI  L+ L  L+L +N   I
Sbjct: 218 PKEIRQLKS----LKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQI 262



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 123/247 (49%), Gaps = 22/247 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +++  L L +N L+  P    +  NL+ L L +N + +LP+ I  F  L  L   NN LT
Sbjct: 87  KDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLT 146

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+  +L  N+L   P +I  + +LK L L NN    V +E+  L  L
Sbjct: 147 V--LPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETL 204

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  IP     L  L+ L+L+ NQL SLP  I  L+ LK+L L  N+ +  P
Sbjct: 205 ENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFP 264

Query: 235 TEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            EI+ LK L                    + LK L L++N++ TLP E+  L  L EL L
Sbjct: 265 VEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHL 324

Query: 276 RDNPLVI 282
             N + I
Sbjct: 325 SGNKITI 331



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 64/163 (39%), Positives = 88/163 (53%), Gaps = 4/163 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++L K + N  +++  +LS   L+  P +I  +  L+ L LG N    + +EI +L  L 
Sbjct: 31  KNLAKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQ 90

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L+L  N LT +P   G L  L+ L L  N+L +LP  I   K L+ L L NNKL  LP 
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPK 150

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           EI  L+ L E    L L +NKL +LPTEI  LK L  L L +N
Sbjct: 151 EIGQLQNLQE----LSLLSNKLISLPTEIEQLKSLKNLDLNNN 189



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 3/123 (2%)

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDM 122
           Y+N L  FP    +  +L+ L L +N+IT LP  +T  P L  L    N +T   LPK++
Sbjct: 279 YYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITI--LPKEI 336

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             LKNL+  +LS N+L   P +I  +  L+ L LGNN L  +P+EI +L  L  L L  N
Sbjct: 337 LQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSN 396

Query: 183 SLT 185
            ++
Sbjct: 397 PIS 399



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 5/113 (4%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           LYHN ++  P   ++  +L+ L LS N+IT LP+ I     L  L   NN L A  LPK+
Sbjct: 301 LYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNA--LPKE 358

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           +  LK L+   L  NQL   P +I  +  L+ L L +N ++  P+E  ++ KL
Sbjct: 359 IGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS--PKEKERIRKL 409


>gi|260789701|ref|XP_002589884.1| hypothetical protein BRAFLDRAFT_235861 [Branchiostoma floridae]
 gi|229275068|gb|EEN45895.1| hypothetical protein BRAFLDRAFT_235861 [Branchiostoma floridae]
          Length = 341

 Score =  107 bits (268), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 118/225 (52%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L+  +N LS  P    +  NL  L +  N++T L   + +   L T++  NN L+ 
Sbjct: 96  NLKMLVASNNELSELPAGFEQLQNLTKLYVGGNKLTELSSGVCSLQHLETVVVSNNKLS- 154

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LP+ +  LKNL    + GNQ  + P+ +  +  L+ L +G N +  +P EI  L +L 
Sbjct: 155 -TLPEGVERLKNLTELYIDGNQFRELPLGVCSLSNLEVLVVGPNPIRFLPDEIKNLIRLK 213

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L++      + P   GDL QL  L LS+N+L +LP ++  LK L+ + L+ NK +T P 
Sbjct: 214 SLTIISCQFEEFPRPIGDLEQLRYLALSNNKLSALPPTMDKLKRLRDVYLYENKFKTFP- 272

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           E++   C   KL  + + NN++  +P+ +  L  L  L +  NPL
Sbjct: 273 EVL---CSLPKLMVVDIRNNRISKIPSSLSHLSRLKRLVVAGNPL 314



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 113/222 (50%), Gaps = 10/222 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           +++ L L  N L+   ++  +   L  LD  +N++T LPQ I +   L  L  + N LT 
Sbjct: 4   DLEYLDLSKNKLTTIHESIGRLQKLYRLDADDNKLTSLPQKIASLQNLEELYLQTNTLT- 62

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP ++  LK L    ++ NQL   P  I  +  LK L   NN L+ +P    +L  L 
Sbjct: 63  -ELPSEVGELKKLGWLYINDNQLVTLPASICSLRNLKMLVASNNELSELPAGFEQLQNLT 121

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L +GGN LT++      L  LE +++S+N+L +LP  +  LK L  L +  N+ R LP 
Sbjct: 122 KLYVGGNKLTELSSGVCSLQHLETVVVSNNKLSTLPEGVERLKNLTELYIDGNQFRELPL 181

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI---ITLKCLSELS 274
            + +L      L+ L++  N +R LP EI   I LK L+ +S
Sbjct: 182 GVCSLS----NLEVLVVGPNPIRFLPDEIKNLIRLKSLTIIS 219



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 96/183 (52%), Gaps = 3/183 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           ++++T+++ +N LS  P+   +  NL  L +  N+   LP  + +   L  L+   N   
Sbjct: 141 QHLETVVVSNNKLSTLPEGVERLKNLTELYIDGNQFRELPLGVCSLSNLEVLVVGPN--P 198

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP ++ NL  LK   +   Q E+FP  I D+  L+YL L NN L+ +P  ++KL +L
Sbjct: 199 IRFLPDEIKNLIRLKSLTIISCQFEEFPRPIGDLEQLRYLALSNNKLSALPPTMDKLKRL 258

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             + L  N     P+    L +L  + + +N++  +P+S+S+L  LK L++  N L+  P
Sbjct: 259 RDVYLYENKFKTFPEVLCSLPKLMVVDIRNNRISKIPSSLSHLSRLKRLVVAGNPLKYPP 318

Query: 235 TEI 237
            ++
Sbjct: 319 ADV 321



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/174 (33%), Positives = 93/174 (53%), Gaps = 19/174 (10%)

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           ++ +L+  +LS N+L      I  +  L  L   +N L  +P++I  L  L  L L  N+
Sbjct: 1   DITDLEYLDLSKNKLTTIHESIGRLQKLYRLDADDNKLTSLPQKIASLQNLEELYLQTNT 60

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP--------- 234
           LT++P   G+L +L  L ++DNQL +LPASI +L+ LK L+  NN+L  LP         
Sbjct: 61  LTELPSEVGELKKLGWLYINDNQLVTLPASICSLRNLKMLVASNNELSELPAGFEQLQNL 120

Query: 235 ----------TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
                     TE+ +  C  + L+++++ NNKL TLP  +  LK L+EL +  N
Sbjct: 121 TKLYVGGNKLTELSSGVCSLQHLETVVVSNNKLSTLPEGVERLKNLTELYIDGN 174



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 69/134 (51%), Gaps = 4/134 (2%)

Query: 147 DIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQ 206
           DI  L+YL L  N L  +   I +L KL+ L    N LT +P     L  LE L L  N 
Sbjct: 1   DITDLEYLDLSKNKLTTIHESIGRLQKLYRLDADDNKLTSLPQKIASLQNLEELYLQTNT 60

Query: 207 LESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIIT 266
           L  LP+ +  LK L  L +++N+L TLP  I +L+     LK L+  NN+L  LP     
Sbjct: 61  LTELPSEVGELKKLGWLYINDNQLVTLPASICSLR----NLKMLVASNNELSELPAGFEQ 116

Query: 267 LKCLSELSLRDNPL 280
           L+ L++L +  N L
Sbjct: 117 LQNLTKLYVGGNKL 130



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 4/89 (4%)

Query: 193 DLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLL 252
           D+  LE L LS N+L ++  SI  L+ L  L   +NKL +LP +I +L+ L E    L L
Sbjct: 1   DITDLEYLDLSKNKLTTIHESIGRLQKLYRLDADDNKLTSLPQKIASLQNLEE----LYL 56

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             N L  LP+E+  LK L  L + DN LV
Sbjct: 57  QTNTLTELPSEVGELKKLGWLYINDNQLV 85


>gi|417760636|ref|ZP_12408653.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417773199|ref|ZP_12421083.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|417784393|ref|ZP_12432099.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|418673942|ref|ZP_13235253.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409943556|gb|EKN89156.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|409952210|gb|EKO06723.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|410577040|gb|EKQ40038.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410579220|gb|EKQ47070.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 423

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 92/249 (36%), Positives = 124/249 (49%), Gaps = 30/249 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L   P    +  +L++LDL+NN  T + + +     L  L  R+N L 
Sbjct: 156 QNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKL- 214

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN--------------- 159
            +++PK++  LK+LKV  L+GNQL   P +I  +  LK L LG N               
Sbjct: 215 -KTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNL 273

Query: 160 --------SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
                    L   P+E+ +L  L  LSL  N +T +P     L  L+ L LS N++  LP
Sbjct: 274 LELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILP 333

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             I  LK L+ L L NNKL  LP EI  LK    KL+ L L NN+L TLP EI  LK L 
Sbjct: 334 KEILQLKNLEWLSLSNNKLNALPKEIGQLK----KLQRLELGNNQLTTLPKEIEQLKNLQ 389

Query: 272 ELSLRDNPL 280
            L L  NP+
Sbjct: 390 RLELDSNPI 398



 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 119/229 (51%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L L    L   P+   +  NL+ LDL  N  T L + I     L  L   NN L
Sbjct: 40  PADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKL 99

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++  L+NL+  +L  N+L   P +I     L+ L L NN L  +P+EI +L  
Sbjct: 100 TV--LPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQN 157

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  LSL  N L  +P     L  L+ L L++N+  ++   +  L+ L++L L +NKL+T+
Sbjct: 158 LQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTI 217

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK     LK L+L  N+L +LP EI  L+ L  L+L +N   I
Sbjct: 218 PKEIRQLKS----LKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQI 262



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 123/247 (49%), Gaps = 22/247 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +++  L L +N L+  P    +  NL+ L L +N + +LP+ I  F  L  L   NN LT
Sbjct: 87  KDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLT 146

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+  +L  N+L   P +I  + +LK L L NN    V +E+  L  L
Sbjct: 147 V--LPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETL 204

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  IP     L  L+ L+L+ NQL SLP  I  L+ LK+L L  N+ +  P
Sbjct: 205 ENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFP 264

Query: 235 TEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            EI+ LK L                    + LK L L++N++ TLP E+  L  L EL L
Sbjct: 265 VEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHL 324

Query: 276 RDNPLVI 282
             N + I
Sbjct: 325 SGNKITI 331



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/163 (39%), Positives = 88/163 (53%), Gaps = 4/163 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++L K + N  +++  +LS   L+  P +I  +  L+ L LG N    + +EI +L  L 
Sbjct: 31  KNLEKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQ 90

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L+L  N LT +P   G L  L+ L L  N+L +LP  I   K L+ L L NNKL  LP 
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPK 150

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           EI  L+ L E    L L +NKL +LPTEI  LK L  L L +N
Sbjct: 151 EIGQLQNLQE----LSLLSNKLISLPTEIEQLKSLKNLDLNNN 189



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 3/123 (2%)

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDM 122
           Y+N L  FP    +  +L+ L L +N+IT LP  +T  P L  L    N +T   LPK++
Sbjct: 279 YYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITI--LPKEI 336

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             LKNL+  +LS N+L   P +I  +  L+ L LGNN L  +P+EI +L  L  L L  N
Sbjct: 337 LQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSN 396

Query: 183 SLT 185
            ++
Sbjct: 397 PIS 399



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 5/113 (4%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           LYHN ++  P   ++  +L+ L LS N+IT LP+ I     L  L   NN L A  LPK+
Sbjct: 301 LYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNA--LPKE 358

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           +  LK L+   L  NQL   P +I  +  L+ L L +N ++  P+E  ++ KL
Sbjct: 359 IGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS--PKEKERIRKL 409


>gi|260788690|ref|XP_002589382.1| hypothetical protein BRAFLDRAFT_77824 [Branchiostoma floridae]
 gi|229274559|gb|EEN45393.1| hypothetical protein BRAFLDRAFT_77824 [Branchiostoma floridae]
          Length = 699

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 118/218 (54%), Gaps = 7/218 (3%)

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDM 122
           ++N LS FP    K   LR L +  N++  +P+ + + P L  L   N+ L+  + P  +
Sbjct: 272 HNNKLSTFPPGVEKLQKLRELRIYGNQLAEVPRGVCSLPNLEVLDVSNSKLS--TFPPGV 329

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             L+ L+  +++GNQL + P  +  +P L+ L + NN L+  P  + KL KL  L + GN
Sbjct: 330 EKLQKLRQLHINGNQLTEVPSGVCSLPNLEELSVYNNKLSTFPPGVEKLQKLRQLYIYGN 389

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            LT++P     L  LE L + +N+L + P  +  L+ L+ L +++N+L  +P+ + +L  
Sbjct: 390 QLTEVPPGVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPSGVCSLP- 448

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
               L+ + ++NNKL T P  +  L+ L EL +  N L
Sbjct: 449 ---NLEVVYVNNNKLSTFPPGVERLQKLRELHVHGNQL 483



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 114/218 (52%), Gaps = 7/218 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L + ++ LS FP    K   LR L ++ N++T +P  + + P L  L   NN L+ 
Sbjct: 311 NLEVLDVSNSKLSTFPPGVEKLQKLRQLHINGNQLTEVPSGVCSLPNLEELSVYNNKLS- 369

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            + P  +  L+ L+   + GNQL + P  +  +P L+ L + NN L+  P  + KL KL 
Sbjct: 370 -TFPPGVEKLQKLRQLYIYGNQLTEVPPGVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLR 428

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L +  N LT++P     L  LE + +++N+L + P  +  L+ L+ L +H N+L    T
Sbjct: 429 ELYIYDNQLTEVPSGVCSLPNLEVVYVNNNKLSTFPPGVERLQKLRELHVHGNQL----T 484

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           EI  + C    L+ L++ +N +R LP  +  L  L  L
Sbjct: 485 EIPPVVCYLTNLEVLIISDNPIRHLPDGVRRLTRLKTL 522



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 74/240 (30%), Positives = 119/240 (49%), Gaps = 9/240 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNN 111
           +K + +  L +Y N L+  P       NL  LD+SN++++  P  +     L  L    N
Sbjct: 284 EKLQKLRELRIYGNQLAEVPRGVCSLPNLEVLDVSNSKLSTFPPGVEKLQKLRQLHINGN 343

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT   +P  + +L NL+  ++  N+L  FP  +  +  L+ LY+  N L  VP  +  L
Sbjct: 344 QLT--EVPSGVCSLPNLEELSVYNNKLSTFPPGVEKLQKLRQLYIYGNQLTEVPPGVCSL 401

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L VLS+  N L+  P     L +L  L + DNQL  +P+ + +L  L+ + ++NNKL 
Sbjct: 402 PNLEVLSVYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPSGVCSLPNLEVVYVNNNKLS 461

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYK 291
           T P  +  L    +KL+ L +H N+L  +P  +  L  L  L + DNP  IR + D   +
Sbjct: 462 TFPPGVERL----QKLRELHVHGNQLTEIPPVVCYLTNLEVLIISDNP--IRHLPDGVRR 515



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 77/265 (29%), Positives = 127/265 (47%), Gaps = 45/265 (16%)

Query: 52  NKKPENIDTLL---LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLI 107
           N +P+ +D LL   L +  L+  P+     T+L  L +SNNR+T +P+AI     LS L 
Sbjct: 6   NLQPQTVDGLLTLDLSNQGLTSIPEEVFDITDLEFLGVSNNRLTSIPEAIGRLQKLSRLD 65

Query: 108 ARNNLLTA---------------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQIL 146
           A  N+LT                       +LP  +  L+ L + ++  N+L + P  + 
Sbjct: 66  AHGNMLTRLPQAIGSLQKLTHLYVYSNKLANLPPGIEKLQKLTLLSIGDNRLTEVPPGVF 125

Query: 147 DIPTLKYLYLGNNSLNHVPREINKLCKLHVLS----------------LGGNSLTDIPDT 190
            +P L+ L + NN L+  P  + KL KL VL                 + GN LT++P  
Sbjct: 126 LLPNLEVLDVSNNKLSTFPPGVEKLQKLRVLGIYDNQLTELQKLRELHINGNQLTEVPSG 185

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
              L  LE L +S+N+L + P  +  L+ L+ L ++ N+L  +P+ + +L      L+ L
Sbjct: 186 VCSLPNLEVLSVSNNKLSTFPPGVEKLQKLRELHINGNQLTEVPSGVCSLP----NLEVL 241

Query: 251 LLHNNKLRTLPTEIITLKCLSELSL 275
            ++NNKL T P  +  L+ L +L +
Sbjct: 242 SVYNNKLSTFPPGVEKLQKLRQLDI 266



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 118/240 (49%), Gaps = 24/240 (10%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT----- 114
           L +Y N L+  P    K   L  L + +NR+T +P  +   P L  L   NN L+     
Sbjct: 87  LYVYSNKLANLPPGIEKLQKLTLLSIGDNRLTEVPPGVFLLPNLEVLDVSNNKLSTFPPG 146

Query: 115 AESLPK---------DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
            E L K          ++ L+ L+  +++GNQL + P  +  +P L+ L + NN L+  P
Sbjct: 147 VEKLQKLRVLGIYDNQLTELQKLRELHINGNQLTEVPSGVCSLPNLEVLSVSNNKLSTFP 206

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + KL KL  L + GN LT++P     L  LE L + +N+L + P  +  L+ L+ L +
Sbjct: 207 PGVEKLQKLRELHINGNQLTEVPSGVCSLPNLEVLSVYNNKLSTFPPGVEKLQKLRQLDI 266

Query: 226 -----HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
                HNNKL T P  +  L    +KL+ L ++ N+L  +P  + +L  L  L + ++ L
Sbjct: 267 YGVKCHNNKLSTFPPGVEKL----QKLRELRIYGNQLAEVPRGVCSLPNLEVLDVSNSKL 322



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/211 (30%), Positives = 104/211 (49%), Gaps = 14/211 (6%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI---TNFPLSTLIARNNLL 113
           N++ + + +N LS FP    +   LR L +  N++T +P  +   TN  L  LI  +N +
Sbjct: 449 NLEVVYVNNNKLSTFPPGVERLQKLRELHVHGNQLTEIPPVVCYLTN--LEVLIISDNPI 506

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP  +  L  LK   +SG Q   FP Q+L + TL+ L+ G    + +P E+  L  
Sbjct: 507 --RHLPDGVRRLTRLKTLYVSGCQ---FPGQVLQLKTLEKLHAGGCKFDMLPDEVGNLQH 561

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  LSL  N L  +P T   L+ L  + L  N+ ++ P  + +L  ++ L + NN +  L
Sbjct: 562 LWFLSLSSNLLRTLPSTMSHLHNLREVHLDKNKFDTFPEVLCDLPAMEKLFISNNNITRL 621

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           PT +      ++KLK L +  N L   P ++
Sbjct: 622 PTALHR----ADKLKDLDVSGNPLTYPPQDV 648



 Score = 81.3 bits (199), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 71/244 (29%), Positives = 110/244 (45%), Gaps = 29/244 (11%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L +Y+N LS FP    K   LR L +  N++T +P  + + P L  L   NN L+ 
Sbjct: 357 NLEELSVYNNKLSTFPPGVEKLQKLRQLYIYGNQLTEVPPGVCSLPNLEVLSVYNNKLST 416

Query: 116 ---------------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYL 154
                                  +P  + +L NL+V  ++ N+L  FP  +  +  L+ L
Sbjct: 417 FPPGVEKLQKLRELYIYDNQLTEVPSGVCSLPNLEVVYVNNNKLSTFPPGVERLQKLREL 476

Query: 155 YLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASI 214
           ++  N L  +P  +  L  L VL +  N +  +PD    L +L+ L +S  Q    P  +
Sbjct: 477 HVHGNQLTEIPPVVCYLTNLEVLIISDNPIRHLPDGVRRLTRLKTLYVSGCQ---FPGQV 533

Query: 215 SNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
             LK L+ L     K   LP E+  L    + L  L L +N LRTLP+ +  L  L E+ 
Sbjct: 534 LQLKTLEKLHAGGCKFDMLPDEVGNL----QHLWFLSLSSNLLRTLPSTMSHLHNLREVH 589

Query: 275 LRDN 278
           L  N
Sbjct: 590 LDKN 593



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 53/154 (34%), Positives = 77/154 (50%), Gaps = 4/154 (2%)

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
            L   +LS   L   P ++ DI  L++L + NN L  +P  I +L KL  L   GN LT 
Sbjct: 14  GLLTLDLSNQGLTSIPEEVFDITDLEFLGVSNNRLTSIPEAIGRLQKLSRLDAHGNMLTR 73

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P   G L +L  L +  N+L +LP  I  L+ L  L + +N+L  +P  +  L      
Sbjct: 74  LPQAIGSLQKLTHLYVYSNKLANLPPGIEKLQKLTLLSIGDNRLTEVPPGVFLLP----N 129

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L+ L + NNKL T P  +  L+ L  L + DN L
Sbjct: 130 LEVLDVSNNKLSTFPPGVEKLQKLRVLGIYDNQL 163


>gi|418707313|ref|ZP_13268139.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772360|gb|EKR47548.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 378

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 87/229 (37%), Positives = 121/229 (52%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L+L    L   P+   +  NL+ LDLS+N++  LP+ I     L  L    N L
Sbjct: 46  PLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQELFLNYNQL 105

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  + PK++  LK+L    LS NQL   P++I  +  L+ L L NN L  + +EI +L  
Sbjct: 106 T--TFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLRELNLWNNQLKTISKEIEQLKN 163

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N LT  P   G L  L++L LS+NQL + P  I  L+ L+ L LH+N+L T 
Sbjct: 164 LQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLHDNQLTTF 223

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
             EI       + L+ LLL+NN+ + LP EI  LK L  L L DN   I
Sbjct: 224 TKEI----GQLKNLRILLLNNNQFKILPEEIGHLKNLQALYLHDNQFKI 268



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 90/247 (36%), Positives = 116/247 (46%), Gaps = 30/247 (12%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L +N L+  P    +  NLR L+L NN++  + + I     L  L   NN LTA   P
Sbjct: 121 LYLSNNQLTILPVEIGQLQNLRELNLWNNQLKTISKEIEQLKNLQKLYLDNNQLTA--FP 178

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNH---------------- 163
           K++  L+NLK   LS NQL  FP +I  +  L+ LYL +N L                  
Sbjct: 179 KEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLHDNQLTTFTKEIGQLKNLRILLL 238

Query: 164 -------VPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
                  +P EI  L  L  L L  N    +P   G L  L+ L LS NQ +++P     
Sbjct: 239 NNNQFKILPEEIGHLKNLQALYLHDNQFKILPKEIGQLQNLQVLFLSYNQFKTIPVEFGQ 298

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           LK LK L L  N+L  LP EI  LK     LK L L  N+L T+P EI  L+ L  L LR
Sbjct: 299 LKNLKMLSLDANQLTALPKEIGKLK----NLKMLNLDANQLTTIPKEIGQLQNLQTLYLR 354

Query: 277 DNPLVIR 283
           +N L I 
Sbjct: 355 NNQLSIE 361



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/203 (39%), Positives = 112/203 (55%), Gaps = 7/203 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L +N L+ FP    K  NL+SL LSNN++T  P+ I     L  L   +N LT
Sbjct: 162 KNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLHDNQLT 221

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +  K++  LKNL++  L+ NQ +  P +I  +  L+ LYL +N    +P+EI +L  L
Sbjct: 222 --TFTKEIGQLKNLRILLLNNNQFKILPEEIGHLKNLQALYLHDNQFKILPKEIGQLQNL 279

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N    IP  FG L  L+ L L  NQL +LP  I  LK LK L L  N+L T+P
Sbjct: 280 QVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLTALPKEIGKLKNLKMLNLDANQLTTIP 339

Query: 235 TEIITLKCLSEKLKSLLLHNNKL 257
            EI  L    + L++L L NN+L
Sbjct: 340 KEIGQL----QNLQTLYLRNNQL 358



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 69/183 (37%), Positives = 90/183 (49%), Gaps = 19/183 (10%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           L K   N  +++V  LS  +L+  P +I  +  L+ L L +N L  +P+EI +L  L  L
Sbjct: 39  LTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQEL 98

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            L  N LT  P     L  L  L LS+NQL  LP  I  L+ L+ L L NN+L+T+  EI
Sbjct: 99  FLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTILPVEIGQLQNLRELNLWNNQLKTISKEI 158

Query: 238 ITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             LK L                    + LKSL L NN+L T P EI  L+ L EL L DN
Sbjct: 159 EQLKNLQKLYLDNNQLTAFPKEIGKLQNLKSLFLSNNQLTTFPKEIGKLQNLQELYLHDN 218

Query: 279 PLV 281
            L 
Sbjct: 219 QLT 221



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 4/97 (4%)

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           D+   F +   +  LILS+ +L++LP  I  LK L+ L L +N+L  LP EI  LK L E
Sbjct: 38  DLTKAFQNPLDVRVLILSEQKLKALPEKIGQLKNLQMLDLSDNQLIILPKEIRQLKNLQE 97

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
               L L+ N+L T P EI  LK L +L L +N L I
Sbjct: 98  ----LFLNYNQLTTFPKEIEQLKSLHKLYLSNNQLTI 130



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 45/125 (36%), Positives = 63/125 (50%), Gaps = 7/125 (5%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L+ N     P    +  NL+ L LS N+   +P        L  L    N LT
Sbjct: 254 KNLQALYLHDNQFKILPKEIGQLQNLQVLFLSYNQFKTIPVEFGQLKNLKMLSLDANQLT 313

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INKL-- 171
           A  LPK++  LKNLK+ NL  NQL   P +I  +  L+ LYL NN L+   +E I KL  
Sbjct: 314 A--LPKEIGKLKNLKMLNLDANQLTTIPKEIGQLQNLQTLYLRNNQLSIEEKERIRKLLP 371

Query: 172 -CKLH 175
            C+++
Sbjct: 372 KCQIY 376


>gi|345489480|ref|XP_001603194.2| PREDICTED: protein lap4-like [Nasonia vitripennis]
          Length = 2178

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 78/224 (34%), Positives = 119/224 (53%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLT 114
           +++ LLL  N++   P N  + T LR L LS+N +  LP  I NF   +   ++RN++  
Sbjct: 38  SLEELLLDANHIRDLPKNFFRLTRLRKLGLSDNELHRLPPDIQNFENLVELDVSRNDI-- 95

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+++ NL++L+V + S N + + P   +++  L  L L + SL  +P     L  L
Sbjct: 96  -PEIPENIKNLRSLQVADFSSNPIPRLPSGFVELRNLTVLGLNDMSLQQLPPNFGGLEAL 154

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +PD+   L +LE L L DN +E LP  I  L  L+ L L +N+L+ LP
Sbjct: 155 QSLELRENLLKTLPDSLSQLKKLERLDLGDNIIEELPPHIGKLPSLQELWLDSNQLQHLP 214

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK L      L +  N+L  LP EI  L+ L++L L  N
Sbjct: 215 PEIGQLKSLV----CLDVSENRLEDLPEEISGLESLTDLHLSQN 254



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 78/210 (37%), Positives = 113/210 (53%), Gaps = 7/210 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E + +L L  N L   PD+ S+   L  LDL +N I  LP  I   P L  L   +N L 
Sbjct: 152 EALQSLELRENLLKTLPDSLSQLKKLERLDLGDNIIEELPPHIGKLPSLQELWLDSNQL- 210

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            + LP ++  LK+L   ++S N+LE  P +I  + +L  L+L  N +  +P  +  L  L
Sbjct: 211 -QHLPPEIGQLKSLVCLDVSENRLEDLPEEISGLESLTDLHLSQNVIEKLPEGLGDLINL 269

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L +  N L+ +    G+   L+ LIL++N L  LP SI NL  L +L +  N L++LP
Sbjct: 270 TILKVDQNRLSVLTHNVGNCVNLQELILTENFLLELPVSIGNLVNLNNLNVDRNSLQSLP 329

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           TEI  LK    KL  L L +NKL+ LPTE+
Sbjct: 330 TEIGNLK----KLGVLSLRDNKLQYLPTEV 355



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 117/267 (43%), Gaps = 43/267 (16%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           EN+  L +  N++   P+N     +L+  D S+N I  LP         T++  N++ + 
Sbjct: 83  ENLVELDVSRNDIPEIPENIKNLRSLQVADFSSNPIPRLPSGFVELRNLTVLGLNDM-SL 141

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           + LP +   L+ L+   L  N L+  P  +  +  L+ L LG+N +  +P  I KL  L 
Sbjct: 142 QQLPPNFGGLEALQSLELRENLLKTLPDSLSQLKKLERLDLGDNIIEELPPHIGKLPSLQ 201

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L  +P   G L  L  L +S+N+LE LP  IS L+ L  L L  N +  LP 
Sbjct: 202 ELWLDSNQLQHLPPEIGQLKSLVCLDVSENRLEDLPEEISGLESLTDLHLSQNVIEKLPE 261

Query: 236 EI-----ITLKCLSEKLKSLLLHN------------------------------------ 254
            +     +T+  + +   S+L HN                                    
Sbjct: 262 GLGDLINLTILKVDQNRLSVLTHNVGNCVNLQELILTENFLLELPVSIGNLVNLNNLNVD 321

Query: 255 -NKLRTLPTEIITLKCLSELSLRDNPL 280
            N L++LPTEI  LK L  LSLRDN L
Sbjct: 322 RNSLQSLPTEIGNLKKLGVLSLRDNKL 348



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 29/215 (13%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP 102
           IE LP +   K P ++  L L  N L   P    +  +L  LD+S NR+  LP+ I+   
Sbjct: 187 IEELPPH-IGKLP-SLQELWLDSNQLQHLPPEIGQLKSLVCLDVSENRLEDLPEEISGLE 244

Query: 103 -LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE---------------------- 139
            L+ L    N++  E LP+ + +L NL +  +  N+L                       
Sbjct: 245 SLTDLHLSQNVI--EKLPEGLGDLINLTILKVDQNRLSVLTHNVGNCVNLQELILTENFL 302

Query: 140 -QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
            + P+ I ++  L  L +  NSL  +P EI  L KL VLSL  N L  +P   G    L 
Sbjct: 303 LELPVSIGNLVNLNNLNVDRNSLQSLPTEIGNLKKLGVLSLRDNKLQYLPTEVGQCTDLH 362

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
            L +S N+L+ LP S+ NL  LK++ L  N+ + +
Sbjct: 363 VLDVSGNRLQYLPYSLINLN-LKAVWLSENQAQPM 396


>gi|291224493|ref|XP_002732238.1| PREDICTED: predicted protein-like, partial [Saccoglossus
           kowalevskii]
          Length = 461

 Score =  107 bits (268), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 122/227 (53%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E +  L + +N L+  PD   K  +++ L L+NN I  +P ++     L+ L  R N LT
Sbjct: 214 EQLTELYMEYNALTAIPDEIGKLKSMKILKLNNNNIEKIPDSLCALEQLTELNVRYNALT 273

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  +P +++ LK++K+ +LS N + + P  +  +  L  LY+G+++L  +P EI KL  +
Sbjct: 274 A--IPDEITKLKSMKILDLSSNNIAKIPDSLCALEQLTELYMGSDALTAIPDEITKLKSM 331

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  +    IPD+   L QL  L +  N L ++P  I+ LK LK L L++N +  +P
Sbjct: 332 KILDLSFSKFAKIPDSLCTLEQLTKLNMHYNALTAIPDEITKLKSLKILNLNHNNIAKIP 391

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             +    C  E+L  L + +N L  +P EI  LK +  L+L  N + 
Sbjct: 392 DSL----CALEQLTELNMVSNALTAIPDEISKLKSMKTLNLSFNKIA 434



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/224 (32%), Positives = 117/224 (52%), Gaps = 7/224 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E +  L + +N L+  PD   K  N+  L+L+ N+I  +P ++     L+ L    N LT
Sbjct: 168 EQLTELYMGYNALTAIPDEIGKLKNMNILNLTFNKIAKIPDSLCALEQLTELYMEYNALT 227

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  +P ++  LK++K+  L+ N +E+ P  +  +  L  L +  N+L  +P EI KL  +
Sbjct: 228 A--IPDEIGKLKSMKILKLNNNNIEKIPDSLCALEQLTELNVRYNALTAIPDEITKLKSM 285

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  N++  IPD+   L QL  L +  + L ++P  I+ LK +K L L  +K   +P
Sbjct: 286 KILDLSSNNIAKIPDSLCALEQLTELYMGSDALTAIPDEITKLKSMKILDLSFSKFAKIP 345

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             + TL    E+L  L +H N L  +P EI  LK L  L+L  N
Sbjct: 346 DSLCTL----EQLTKLNMHYNALTAIPDEITKLKSLKILNLNHN 385



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 122/224 (54%), Gaps = 13/224 (5%)

Query: 46  LPNNDYNKKP------ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN+  K P      E +  L + +N L+  PD  +K  +++ LDLS+N I  +P ++ 
Sbjct: 244 LNNNNIEKIPDSLCALEQLTELNVRYNALTAIPDEITKLKSMKILDLSSNNIAKIPDSLC 303

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L+ L   ++ LTA  +P +++ LK++K+ +LS ++  + P  +  +  L  L +  
Sbjct: 304 ALEQLTELYMGSDALTA--IPDEITKLKSMKILDLSFSKFAKIPDSLCTLEQLTKLNMHY 361

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N+L  +P EI KL  L +L+L  N++  IPD+   L QL  L +  N L ++P  IS LK
Sbjct: 362 NALTAIPDEITKLKSLKILNLNHNNIAKIPDSLCALEQLTELNMVSNALTAIPDEISKLK 421

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
            +K+L L  NK+  +P  +    C  E+L  L + +N L ++P+
Sbjct: 422 SMKTLNLSFNKIAKIPDSL----CALEQLTELDMMSNALTSIPS 461



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 111/212 (52%), Gaps = 7/212 (3%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
           +N L+  P    +   L+ L LS+N+I  +P ++     L+ L    N LTA  +P ++ 
Sbjct: 131 NNGLTIVPRKIGECHELQKLKLSSNKIAKIPDSLCALEQLTELYMGYNALTA--IPDEIG 188

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            LKN+ + NL+ N++ + P  +  +  L  LY+  N+L  +P EI KL  + +L L  N+
Sbjct: 189 KLKNMNILNLTFNKIAKIPDSLCALEQLTELYMEYNALTAIPDEIGKLKSMKILKLNNNN 248

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           +  IPD+   L QL  L +  N L ++P  I+ LK +K L L +N +  +P  +    C 
Sbjct: 249 IEKIPDSLCALEQLTELNVRYNALTAIPDEITKLKSMKILDLSSNNIAKIPDSL----CA 304

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            E+L  L + ++ L  +P EI  LK +  L L
Sbjct: 305 LEQLTELYMGSDALTAIPDEITKLKSMKILDL 336



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/124 (35%), Positives = 61/124 (49%), Gaps = 4/124 (3%)

Query: 155 YLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASI 214
           Y  NN L  VPR+I +  +L  L L  N +  IPD+   L QL  L +  N L ++P  I
Sbjct: 128 YTQNNGLTIVPRKIGECHELQKLKLSSNKIAKIPDSLCALEQLTELYMGYNALTAIPDEI 187

Query: 215 SNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
             LK +  L L  NK+  +P  +    C  E+L  L +  N L  +P EI  LK +  L 
Sbjct: 188 GKLKNMNILNLTFNKIAKIPDSL----CALEQLTELYMEYNALTAIPDEIGKLKSMKILK 243

Query: 275 LRDN 278
           L +N
Sbjct: 244 LNNN 247


>gi|429962306|gb|ELA41850.1| hypothetical protein VICG_01034, partial [Vittaforma corneae ATCC
           50505]
          Length = 235

 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 82/232 (35%), Positives = 124/232 (53%), Gaps = 9/232 (3%)

Query: 51  YNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTL-IA 108
           + + P +  ++ +  + ++    N  +   L+ L+L +NR+  LP  I   + L  L ++
Sbjct: 8   FEEHPAHKTSISIPSHGITSIDSNVKRLVGLQCLNLRSNRLRILPIEIGELWNLQELDLS 67

Query: 109 RNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREI 168
            N L     LP D+  LK+L+   +S N+L   P +I+++  L+ LY   N L  +P EI
Sbjct: 68  WNKL---RQLPADIKKLKSLQRLYISFNKLRALPCEIVELWNLQELYASYNRLESLPVEI 124

Query: 169 NKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
             L  L  L L  N L  +PD  G+L  ++ L LS N+L SL A I  LK L+ L +  N
Sbjct: 125 GNLKNLTKLYLRSNVLRSLPDGIGELISIQGLDLSWNKLRSLSAEIGKLKSLQELYVSYN 184

Query: 229 KLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +L +LP EI  LK L++    L L +N LR+LP EI TL  L +L L DN L
Sbjct: 185 RLESLPVEIGNLKNLTK----LFLRSNVLRSLPDEIETLNKLQQLILSDNKL 232



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/209 (38%), Positives = 108/209 (51%), Gaps = 7/209 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           K+   +  L L  N L   P    +  NL+ LDLS N++  LP  I     L  L    N
Sbjct: 33  KRLVGLQCLNLRSNRLRILPIEIGELWNLQELDLSWNKLRQLPADIKKLKSLQRLYISFN 92

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            L A  LP ++  L NL+    S N+LE  P++I ++  L  LYL +N L  +P  I +L
Sbjct: 93  KLRA--LPCEIVELWNLQELYASYNRLESLPVEIGNLKNLTKLYLRSNVLRSLPDGIGEL 150

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             +  L L  N L  +    G L  L+ L +S N+LESLP  I NLK L  L L +N LR
Sbjct: 151 ISIQGLDLSWNKLRSLSAEIGKLKSLQELYVSYNRLESLPVEIGNLKNLTKLFLRSNVLR 210

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
           +LP EI TL     KL+ L+L +NKL +L
Sbjct: 211 SLPDEIETLN----KLQQLILSDNKLDSL 235


>gi|302540741|ref|ZP_07293083.1| leucine-rich repeAt and death domain-containing protein
           (p53-inducedprotein with a death domain) [Streptomyces
           hygroscopicus ATCC 53653]
 gi|302458359|gb|EFL21452.1| leucine-rich repeAt and death domain-containing protein
           (p53-inducedprotein with a death domain) [Streptomyces
           himastatinicus ATCC 53653]
          Length = 301

 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 113/224 (50%), Gaps = 8/224 (3%)

Query: 59  DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTAES 117
           DTL L+   L+  PD   + T LR L L++N +T LP A+     L TL   +N L    
Sbjct: 62  DTLNLWKAGLAEAPDAIWQHTGLRVLILADNALTRLPPALGRLLRLHTLDLGHNRLA--G 119

Query: 118 LPKDMSNLKNL-KVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +P+++  L  L +   L  N+L + P  +  +  L YL +G N L  +P E+  +  L  
Sbjct: 120 IPEEIGELSGLTRCLYLHDNRLPRLPRSLGRLDRLGYLNVGENPLGGLPEELGGMAGLVE 179

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L      LT +P + G L  L  L L  N++ +LPA +S L+ L+ L L  N L  +P  
Sbjct: 180 LRAQHAELTALPGSIGQLSALRELWLRGNRITALPAGVSALRALRQLELRENALSEVPEP 239

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +  L     +L+ L L  N++RTLP  +  L  L +L LR NPL
Sbjct: 240 LRGLP----RLRHLDLRGNRIRTLPDWVAELPALEKLDLRWNPL 279



 Score = 62.8 bits (151), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 71/149 (47%), Gaps = 3/149 (2%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L+ N L   P +  +   L  L++  N +  LP+ +     L  L A++  LTA  LP
Sbjct: 134 LYLHDNRLPRLPRSLGRLDRLGYLNVGENPLGGLPEELGGMAGLVELRAQHAELTA--LP 191

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             +  L  L+   L GN++   P  +  +  L+ L L  N+L+ VP  +  L +L  L L
Sbjct: 192 GSIGQLSALRELWLRGNRITALPAGVSALRALRQLELRENALSEVPEPLRGLPRLRHLDL 251

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLE 208
            GN +  +PD   +L  LE L L  N L+
Sbjct: 252 RGNRIRTLPDWVAELPALEKLDLRWNPLD 280


>gi|390332707|ref|XP_003723563.1| PREDICTED: leucine-rich repeat-containing protein 69-like isoform 1
           [Strongylocentrotus purpuratus]
          Length = 345

 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 159/337 (47%), Gaps = 27/337 (8%)

Query: 59  DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAES 117
            TL L   NLS  P    K   L +L L NN+I  LP+  T+   L TL   NN +  E 
Sbjct: 15  QTLNLSSKNLSNVPKAVGKLYRLHNLQLKNNKIVKLPKEFTSLTTLVTLNLGNNCI--EE 72

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILD-IPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +P ++S+L +L+V ++  N+++    +IL  +  LK L L NN +  +P  +NKL  L  
Sbjct: 73  IPDELSSLHSLEVLHIFNNKIQNVESKILGCLRHLKILNLNNNQIKSLPISMNKLINLEF 132

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           LS+ GN LT +P     L  +  +  ++NQL SLP  +  L  LK   +  N+++ LP  
Sbjct: 133 LSVDGNQLTTLPGEICALSHMVEIHAANNQLTSLPMELGFLVKLKKFHVQQNRIKELPEG 192

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV--IRFVSDMTYKPPS 294
           +  L+     L+ + +  N+LR  PTE+  L  L EL   +NPL+  I   S    +  +
Sbjct: 193 MGKLR----NLEVIDVAANELRIFPTELHKLP-LKELYCEENPLLDKIPVQSVQEDEVLT 247

Query: 295 LLELASRTL------KVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKF 348
           L EL +R +      +   +  +  H P N+   L  A  C    C   F +  +E + F
Sbjct: 248 LKELTARYVMKQLKDRWSYLRRAIRHYP-NVRDMLAQASKCA--LCGESFLNTWLECVCF 304

Query: 349 VDFCGKY-------RIPLLQYLCSSRCITNSPNVMYG 378
           VD            +IP+   LCS +C     +  YG
Sbjct: 305 VDGHKDLKLGNSPGKIPIRALLCSYKCFNQPGHGFYG 341


>gi|255077272|ref|XP_002502281.1| predicted protein [Micromonas sp. RCC299]
 gi|226517546|gb|ACO63539.1| predicted protein [Micromonas sp. RCC299]
          Length = 228

 Score =  107 bits (267), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 69/164 (42%), Positives = 88/164 (53%), Gaps = 4/164 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++P ++  L +L    L GNQL   P +I  + +L+ LYL  N L  VP EI +L  L  
Sbjct: 19  AVPAEIGQLTSLVRLELDGNQLTSLPAEIGQLTSLEELYLDENQLTSVPEEIWQLTSLVR 78

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L GN LT +P   G L  LE L+L DNQL S+PA I  L  L  L L  N+L +LP E
Sbjct: 79  LDLDGNLLTSVPAEIGQLTSLETLLLYDNQLTSVPAEIGQLTSLTVLGLDGNQLTSLPAE 138

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L      LK L L+ N+L +LP EI  L  +  L L  N L
Sbjct: 139 IGQLV----SLKELYLNGNQLTSLPAEIGQLTSMEGLGLDGNQL 178



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 75/202 (37%), Positives = 103/202 (50%), Gaps = 7/202 (3%)

Query: 69  SFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKN 127
              P    + T+L  L+L  N++T LP  I     L  L    N LT  S+P+++  L +
Sbjct: 18  GAVPAEIGQLTSLVRLELDGNQLTSLPAEIGQLTSLEELYLDENQLT--SVPEEIWQLTS 75

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           L   +L GN L   P +I  + +L+ L L +N L  VP EI +L  L VL L GN LT +
Sbjct: 76  LVRLDLDGNLLTSVPAEIGQLTSLETLLLYDNQLTSVPAEIGQLTSLTVLGLDGNQLTSL 135

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
           P   G L  L+ L L+ NQL SLPA I  L  ++ L L  N+L ++P EI  L  L +  
Sbjct: 136 PAEIGQLVSLKELYLNGNQLTSLPAEIGQLTSMEGLGLDGNQLTSVPAEIGQLTSLVD-- 193

Query: 248 KSLLLHNNKLRTLPTEIITLKC 269
             L L  NKL  +P  I  L+ 
Sbjct: 194 --LDLGRNKLTRVPAAIRELRV 213



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 61/164 (37%), Positives = 88/164 (53%), Gaps = 3/164 (1%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           +++ L L  N L+  P+   + T+L  LDL  N +T +P  I     L TL+  +N LT 
Sbjct: 52  SLEELYLDENQLTSVPEEIWQLTSLVRLDLDGNLLTSVPAEIGQLTSLETLLLYDNQLT- 110

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            S+P ++  L +L V  L GNQL   P +I  + +LK LYL  N L  +P EI +L  + 
Sbjct: 111 -SVPAEIGQLTSLTVLGLDGNQLTSLPAEIGQLVSLKELYLNGNQLTSLPAEIGQLTSME 169

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L L GN LT +P   G L  L  L L  N+L  +PA+I  L++
Sbjct: 170 GLGLDGNQLTSVPAEIGQLTSLVDLDLGRNKLTRVPAAIRELRV 213


>gi|425465644|ref|ZP_18844951.1| Small GTP-binding protein domain protein (fragment) [Microcystis
           aeruginosa PCC 9809]
 gi|389832091|emb|CCI24623.1| Small GTP-binding protein domain protein (fragment) [Microcystis
           aeruginosa PCC 9809]
          Length = 865

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 123/228 (53%), Gaps = 7/228 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K E  + L L + NL+  P    + T+L+ L+L NN+I+ +P+A+     L  L   NN 
Sbjct: 14  KDERAEKLDLSNKNLTEIPPEIPQLTSLQYLNLRNNQISEIPEALAQLTSLQHLRLSNNQ 73

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           ++   +P+ ++ L +L+V NL+ NQ+ +    +  + +L+ L+L NN +  +P  +  L 
Sbjct: 74  IS--EIPEALAQLTSLQVLNLNNNQIREIQEALAHLTSLQGLFLNNNQIREIPEALAHLT 131

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N +++IP     L  L+ L L +NQ+  +P +++ L  L+ L L NN++R 
Sbjct: 132 SLQYLYLNNNQISEIPKALAQLTSLQHLFLYNNQIREIPEALAQLTSLQDLDLSNNQIRE 191

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +P  +  L      L+ L L NN++R +P  +  L  L  L L +NP+
Sbjct: 192 IPEALAHLTS----LQRLYLDNNQIREIPEALAHLVNLKGLVLGNNPI 235



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 84/276 (30%), Positives = 147/276 (53%), Gaps = 22/276 (7%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM 122
           L +N +S  P+  ++ T+L+ L LSNN+I+ +P+A+       ++  NN    E + + +
Sbjct: 46  LRNNQISEIPEALAQLTSLQHLRLSNNQISEIPEALAQLTSLQVLNLNNNQIRE-IQEAL 104

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
           ++L +L+   L+ NQ+ + P  +  + +L+YLYL NN ++ +P+ + +L  L  L L  N
Sbjct: 105 AHLTSLQGLFLNNNQIREIPEALAHLTSLQYLYLNNNQISEIPKALAQLTSLQHLFLYNN 164

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            + +IP+    L  L+ L LS+NQ+  +P ++++L  L+ L L NN++R +P  +  L  
Sbjct: 165 QIREIPEALAQLTSLQDLDLSNNQIREIPEALAHLTSLQRLYLDNNQIREIPEALAHLV- 223

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI-RFVSDMTYKPPSLLELASR 301
               LK L+L NN +  +P EII   C       DNP  I  ++ +   +P  L EL  +
Sbjct: 224 ---NLKGLVLGNNPITNVPPEII---CY------DNPQAIFSYLKNKATRP--LNEL--K 267

Query: 302 TLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGV 337
            L V E D  +  L   L + L +  +   PK  G+
Sbjct: 268 VLLVGEGDVGKTSL---LKRLLHNTFNSEEPKTPGI 300



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 60/200 (30%), Positives = 113/200 (56%), Gaps = 9/200 (4%)

Query: 46  LPNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN  ++ PE      ++  L L +N +S  P+  ++ T+L+ L+L+NN+I  + +A+ 
Sbjct: 46  LRNNQISEIPEALAQLTSLQHLRLSNNQISEIPEALAQLTSLQVLNLNNNQIREIQEALA 105

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
           +   L  L   NN +    +P+ +++L +L+   L+ NQ+ + P  +  + +L++L+L N
Sbjct: 106 HLTSLQGLFLNNNQI--REIPEALAHLTSLQYLYLNNNQISEIPKALAQLTSLQHLFLYN 163

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N +  +P  + +L  L  L L  N + +IP+    L  L+ L L +NQ+  +P ++++L 
Sbjct: 164 NQIREIPEALAQLTSLQDLDLSNNQIREIPEALAHLTSLQRLYLDNNQIREIPEALAHLV 223

Query: 219 MLKSLLLHNNKLRTLPTEII 238
            LK L+L NN +  +P EII
Sbjct: 224 NLKGLVLGNNPITNVPPEII 243



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 106/199 (53%), Gaps = 6/199 (3%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            +P ++  L +L+  NL  NQ+ + P  +  + +L++L L NN ++ +P  + +L  L V
Sbjct: 30  EIPPEIPQLTSLQYLNLRNNQISEIPEALAQLTSLQHLRLSNNQISEIPEALAQLTSLQV 89

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+L  N + +I +    L  L+ L L++NQ+  +P ++++L  L+ L L+NN++  +P  
Sbjct: 90  LNLNNNQIREIQEALAHLTSLQGLFLNNNQIREIPEALAHLTSLQYLYLNNNQISEIPKA 149

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
           +  L      L+ L L+NN++R +P  +  L  L +L L +N   IR + +      SL 
Sbjct: 150 LAQLTS----LQHLFLYNNQIREIPEALAQLTSLQDLDLSNNQ--IREIPEALAHLTSLQ 203

Query: 297 ELASRTLKVHEIDYSQEHL 315
            L     ++ EI  +  HL
Sbjct: 204 RLYLDNNQIREIPEALAHL 222



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 109/220 (49%), Gaps = 17/220 (7%)

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            +LS   L + P +I  + +L+YL L NN ++ +P  + +L  L  L L  N +++IP+ 
Sbjct: 21  LDLSNKNLTEIPPEIPQLTSLQYLNLRNNQISEIPEALAQLTSLQHLRLSNNQISEIPEA 80

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
              L  L+ L L++NQ+  +  ++++L  L+ L L+NN++R +P  +  L      L+ L
Sbjct: 81  LAQLTSLQVLNLNNNQIREIQEALAHLTSLQGLFLNNNQIREIPEALAHLTS----LQYL 136

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDY 310
            L+NN++  +P  +  L  L  L L +N   IR + +   +  SL +L     ++ EI  
Sbjct: 137 YLNNNQISEIPKALAQLTSLQHLFLYNNQ--IREIPEALAQLTSLQDLDLSNNQIREIPE 194

Query: 311 SQEHLPQNLVQYL---------ESAHHCVNPKCKGVFFDN 341
           +  HL      YL         E+  H VN   KG+   N
Sbjct: 195 ALAHLTSLQRLYLDNNQIREIPEALAHLVN--LKGLVLGN 232


>gi|418690500|ref|ZP_13251616.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|421128085|ref|ZP_15588303.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
 gi|421133358|ref|ZP_15593506.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|400360685|gb|EJP16657.1| leucine rich repeat protein [Leptospira interrogans str. FPW2026]
 gi|410022366|gb|EKO89143.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. Andaman]
 gi|410434552|gb|EKP83690.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. 2006006986]
          Length = 423

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/249 (36%), Positives = 124/249 (49%), Gaps = 30/249 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L   P    +  +L++LDL+NN  T + + +     L  L  R+N L 
Sbjct: 156 QNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKL- 214

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN--------------- 159
            +++PK++  LK+LKV  L+GNQL   P +I  +  LK L LG N               
Sbjct: 215 -KTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFPVEILELKNL 273

Query: 160 --------SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
                    L   P+E+ +L  L  LSL  N +T +P     L  L+ L LS N++  LP
Sbjct: 274 LELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILP 333

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             I  LK L+ L L NNKL  LP EI  LK    KL+ L L NN+L TLP EI  LK L 
Sbjct: 334 KEILQLKNLEWLSLSNNKLNALPKEIGQLK----KLQRLELGNNQLTTLPKEIEQLKNLQ 389

Query: 272 ELSLRDNPL 280
            L L  NP+
Sbjct: 390 RLELDSNPI 398



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/247 (34%), Positives = 123/247 (49%), Gaps = 22/247 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +++  L L +N L+  P    +  NL+ L L +N + +LP+ I  F  L  L   NN LT
Sbjct: 87  KDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLT 146

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+  +L  N+L   P +I  + +LK L L NN    V +E+  L  L
Sbjct: 147 V--LPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETL 204

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  IP     L  L+ L+L+ NQL SLP  I  L+ LK+L L  N+ +  P
Sbjct: 205 ENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQIFP 264

Query: 235 TEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            EI+ LK L                    + LK L L++N++ TLP E+  L  L EL L
Sbjct: 265 VEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHL 324

Query: 276 RDNPLVI 282
             N + I
Sbjct: 325 SGNKITI 331



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 119/229 (51%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L L    L   P+   +  NL+ LDL  N  T L + I     L  L   NN L
Sbjct: 40  PADVRNLDLSFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKL 99

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++  L+NL+  +L  N+L   P +I     L+ L L NN L  +P+EI +L  
Sbjct: 100 TV--LPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQN 157

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  LSL  N L  +P     L  L+ L L++N+  ++   +  L+ L++L L +NKL+T+
Sbjct: 158 LQELSLLSNKLISLPTEIEQLKSLKNLDLNNNEFTTVSKEVMLLETLENLDLRSNKLKTI 217

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK     LK L+L  N+L +LP EI  L+ L  L+L +N   I
Sbjct: 218 PKEIRQLKS----LKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQI 262



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 64/163 (39%), Positives = 88/163 (53%), Gaps = 4/163 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++L K + N  +++  +LS   L+  P +I  +  L+ L LG N    + +EI +L  L 
Sbjct: 31  KNLEKALQNPADVRNLDLSFLGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQ 90

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L+L  N LT +P   G L  L+ L L  N+L +LP  I   K L+ L L NNKL  LP 
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPK 150

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           EI  L+ L E    L L +NKL +LPTEI  LK L  L L +N
Sbjct: 151 EIGQLQNLQE----LSLLSNKLISLPTEIEQLKSLKNLDLNNN 189



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 3/123 (2%)

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDM 122
           Y+N L  FP    +  +L+ L L +N+IT LP  +T  P L  L    N +T   LPK++
Sbjct: 279 YYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITI--LPKEI 336

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             LKNL+  +LS N+L   P +I  +  L+ L LGNN L  +P+EI +L  L  L L  N
Sbjct: 337 LQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSN 396

Query: 183 SLT 185
            ++
Sbjct: 397 PIS 399



 Score = 57.0 bits (136), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 5/113 (4%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           LYHN ++  P   ++  +L+ L LS N+IT LP+ I     L  L   NN L A  LPK+
Sbjct: 301 LYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNA--LPKE 358

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           +  LK L+   L  NQL   P +I  +  L+ L L +N ++  P+E  ++ KL
Sbjct: 359 IGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS--PKEKERIRKL 409


>gi|24213573|ref|NP_711054.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|386073187|ref|YP_005987504.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
 gi|24194363|gb|AAN48072.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. 56601]
 gi|353456976|gb|AER01521.1| cytoplasmic membrane protein [Leptospira interrogans serovar Lai
           str. IPAV]
          Length = 423

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/244 (39%), Positives = 129/244 (52%), Gaps = 16/244 (6%)

Query: 38  TLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQA 97
           +L T+IE L      K  +N+D   L HN L+           L +LDL +N++  +P+ 
Sbjct: 170 SLPTEIEQL------KSLKNLD---LNHNELTTVSKEVMLLETLENLDLRSNKLKTIPKE 220

Query: 98  ITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL 156
           I     L  L+   N LT  SLPK++  L+NLK  NL  N+ +  P++IL++  L  L L
Sbjct: 221 IRQLKSLKVLMLTGNQLT--SLPKEIEQLQNLKTLNLGENRFQILPVEILELKNLLELNL 278

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
             N L   P+E+ +L  L  LSL  N +T +P     L  L+ L LS N++  LP  I  
Sbjct: 279 YYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQ 338

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           LK L+ L L NNKL  LP EI  LK    KL+ L L NN+L TLP EI  LK L  L L 
Sbjct: 339 LKNLEWLSLSNNKLNALPKEIGQLK----KLQRLELGNNQLTTLPKEIEQLKNLQRLELD 394

Query: 277 DNPL 280
            NP+
Sbjct: 395 SNPI 398



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 83/229 (36%), Positives = 119/229 (51%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L L    L   P+   +  NL+ LDL  N  T L + I     L  L   NN L
Sbjct: 40  PADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQKLNLNNNKL 99

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LPK++  L+NL+  +L  N+L   P +I     L+ L L NN L  +P+EI +L  
Sbjct: 100 TV--LPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPKEIGQLQN 157

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  LSL  N L  +P     L  L+ L L+ N+L ++   +  L+ L++L L +NKL+T+
Sbjct: 158 LQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLENLDLRSNKLKTI 217

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  LK     LK L+L  N+L +LP EI  L+ L  L+L +N   I
Sbjct: 218 PKEIRQLKS----LKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQI 262



 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 87/247 (35%), Positives = 125/247 (50%), Gaps = 22/247 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +++  L L +N L+  P    +  NL+ L L +N + +LP+ I  F  L  L   NN LT
Sbjct: 87  KDLQKLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLT 146

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LPK++  L+NL+  +L  N+L   P +I  + +LK L L +N L  V +E+  L  L
Sbjct: 147 V--LPKEIGQLQNLQELSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETL 204

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  IP     L  L+ L+L+ NQL SLP  I  L+ LK+L L  N+ + LP
Sbjct: 205 ENLDLRSNKLKTIPKEIRQLKSLKVLMLTGNQLTSLPKEIEQLQNLKTLNLGENRFQILP 264

Query: 235 TEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            EI+ LK L                    + LK L L++N++ TLP E+  L  L EL L
Sbjct: 265 VEILELKNLLELNLYYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHL 324

Query: 276 RDNPLVI 282
             N + I
Sbjct: 325 SGNKITI 331



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 96/190 (50%), Gaps = 4/190 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++L K + N  +++  +LS   L+  P +I  +  L+ L LG N    + +EI +L  L 
Sbjct: 31  KNLAKALQNPADVRNLDLSFQGLKTLPNKIGQLKNLQKLDLGGNEPTILSKEIWQLKDLQ 90

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L+L  N LT +P   G L  L+ L L  N+L +LP  I   K L+ L L NNKL  LP 
Sbjct: 91  KLNLNNNKLTVLPKEIGQLQNLQELSLHSNELVNLPKEIGQFKNLQKLNLDNNKLTVLPK 150

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
           EI  L+ L E    L L +NKL +LPTEI  LK L  L L  N L       M  +    
Sbjct: 151 EIGQLQNLQE----LSLLSNKLISLPTEIEQLKSLKNLDLNHNELTTVSKEVMLLETLEN 206

Query: 296 LELASRTLKV 305
           L+L S  LK 
Sbjct: 207 LDLRSNKLKT 216



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 68/123 (55%), Gaps = 3/123 (2%)

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDM 122
           Y+N L  FP    +  +L+ L L +N+IT LP  +T  P L  L    N +T   LPK++
Sbjct: 279 YYNQLVEFPKEVGQLKSLKYLSLYHNQITTLPVEVTQLPDLQELHLSGNKITI--LPKEI 336

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             LKNL+  +LS N+L   P +I  +  L+ L LGNN L  +P+EI +L  L  L L  N
Sbjct: 337 LQLKNLEWLSLSNNKLNALPKEIGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSN 396

Query: 183 SLT 185
            ++
Sbjct: 397 PIS 399



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/113 (36%), Positives = 61/113 (53%), Gaps = 5/113 (4%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           LYHN ++  P   ++  +L+ L LS N+IT LP+ I     L  L   NN L A  LPK+
Sbjct: 301 LYHNQITTLPVEVTQLPDLQELHLSGNKITILPKEILQLKNLEWLSLSNNKLNA--LPKE 358

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           +  LK L+   L  NQL   P +I  +  L+ L L +N ++  P+E  ++ KL
Sbjct: 359 IGQLKKLQRLELGNNQLTTLPKEIEQLKNLQRLELDSNPIS--PKEKERIRKL 409


>gi|320162772|gb|EFW39671.1| leucine-rich repeat protein SHOC-2 [Capsaspora owczarzaki ATCC
           30864]
          Length = 490

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 120/226 (53%), Gaps = 9/226 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLL--T 114
           N++ L L  NN +  P +    T L   ++ NN +  +P  I  F    L+ + NL   +
Sbjct: 182 NVNNLQLSRNNFTTIPADLGALTKLEIFNMDNNSVREIPAGI--FSSLKLLGKINLNYNS 239

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             S+P D+ +L +L+  NL  N+LE  P  +  +  L+ L LGNN+L+ +P   ++L KL
Sbjct: 240 ITSIPNDIGDLVSLREINLGSNKLELLPETLGQLVNLESLVLGNNNLSALPESASRLVKL 299

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L GN LT +P+  G L  LE L    N+L +LP S+ NL  L+   +  N+L  LP
Sbjct: 300 RVLDLEGNRLTRLPE-IGSLAALEELHAQSNRLTALPQSLGNLHALRLFYVGENQLTELP 358

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             I  LK L+    S  +++N+L  +P E+     L  L+L DNPL
Sbjct: 359 LSIGQLKSLT----SFHVNDNRLSDVPCELANCLKLQLLNLDDNPL 400



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 84/266 (31%), Positives = 123/266 (46%), Gaps = 38/266 (14%)

Query: 48  NNDYNKK---PENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI 98
           N +YNK    PE I  L+      L +N+L   P        L  L++  N++  LP  I
Sbjct: 117 NVEYNKLERLPEEIGNLVKLKHFGLRYNSLVELPLAIKNCVLLEELNVEGNKLVVLPTGI 176

Query: 99  TNFPLSTLIARNNLLTAE----SLPKDMSNLKNLKVFNLSGNQLEQFPIQILD-IPTLKY 153
               LS L+  NNL  +     ++P D+  L  L++FN+  N + + P  I   +  L  
Sbjct: 177 ----LSQLVNVNNLQLSRNNFTTIPADLGALTKLEIFNMDNNSVREIPAGIFSSLKLLGK 232

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           + L  NS+  +P +I  L  L  ++LG N L  +P+T G L  LE+L+L +N L +LP S
Sbjct: 233 INLNYNSITSIPNDIGDLVSLREINLGSNKLELLPETLGQLVNLESLVLGNNNLSALPES 292

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE-------------------KLKSLLLHN 254
            S L  L+ L L  N+L  LP EI +L  L E                    L+   +  
Sbjct: 293 ASRLVKLRVLDLEGNRLTRLP-EIGSLAALEELHAQSNRLTALPQSLGNLHALRLFYVGE 351

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPL 280
           N+L  LP  I  LK L+   + DN L
Sbjct: 352 NQLTELPLSIGQLKSLTSFHVNDNRL 377



 Score = 89.0 bits (219), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/216 (32%), Positives = 108/216 (50%), Gaps = 6/216 (2%)

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDM 122
           YH  L+  PD      NL  LDL +N+ T +P  I     LS L  R N LT  S   D+
Sbjct: 4   YHPQLTSLPDELELLKNLNVLDLRHNKFTEVPPVIYRMKQLSKLYLRYNKLTWIS--HDI 61

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
            NL  L + ++  N++ + P  + ++  L+ L L NN L  +P  I KL +L  L++  N
Sbjct: 62  GNLTGLNILSIRNNKITELPASLGNLAGLQILDLMNNCLTALPSSIGKLSRLSSLNVEYN 121

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            L  +P+  G+L +L+   L  N L  LP +I N  +L+ L +  NKL  LPT I++   
Sbjct: 122 KLERLPEEIGNLVKLKHFGLRYNSLVELPLAIKNCVLLEELNVEGNKLVVLPTGILSQLV 181

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
               + +L L  N   T+P ++  L  L   ++ +N
Sbjct: 182 ---NVNNLQLSRNNFTTIPADLGALTKLEIFNMDNN 214



 Score = 86.3 bits (212), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 64/166 (38%), Positives = 88/166 (53%), Gaps = 4/166 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           SLP ++  LKNL V +L  N+  + P  I  +  L  LYL  N L  +  +I  L  L++
Sbjct: 10  SLPDELELLKNLNVLDLRHNKFTEVPPVIYRMKQLSKLYLRYNKLTWISHDIGNLTGLNI 69

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           LS+  N +T++P + G+L  L+ L L +N L +LP+SI  L  L SL +  NKL  LP E
Sbjct: 70  LSIRNNKITELPASLGNLAGLQILDLMNNCLTALPSSIGKLSRLSSLNVEYNKLERLPEE 129

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           I  L     KLK   L  N L  LP  I     L EL++  N LV+
Sbjct: 130 IGNLV----KLKHFGLRYNSLVELPLAIKNCVLLEELNVEGNKLVV 171



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 86/284 (30%), Positives = 131/284 (46%), Gaps = 40/284 (14%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           + +  L L +N L++   +    T L  L + NN+IT LP ++ N   L  L   NN LT
Sbjct: 42  KQLSKLYLRYNKLTWISHDIGNLTGLNILSIRNNKITELPASLGNLAGLQILDLMNNCLT 101

Query: 115 A---------------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKY 153
           A                     E LP+++ NL  LK F L  N L + P+ I +   L+ 
Sbjct: 102 ALPSSIGKLSRLSSLNVEYNKLERLPEEIGNLVKLKHFGLRYNSLVELPLAIKNCVLLEE 161

Query: 154 LYLGNNSLNHVPREI-NKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
           L +  N L  +P  I ++L  ++ L L  N+ T IP   G L +LE   + +N +  +PA
Sbjct: 162 LNVEGNKLVVLPTGILSQLVNVNNLQLSRNNFTTIPADLGALTKLEIFNMDNNSVREIPA 221

Query: 213 SI-SNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
            I S+LK+L  + L+ N + ++P +I  L  L E    + L +NKL  LP  +  L  L 
Sbjct: 222 GIFSSLKLLGKINLNYNSITSIPNDIGDLVSLRE----INLGSNKLELLPETLGQLVNLE 277

Query: 272 ELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHL 315
            L L +N L             +L E ASR +K+  +D     L
Sbjct: 278 SLVLGNNNL------------SALPESASRLVKLRVLDLEGNRL 309



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 100/178 (56%), Gaps = 4/178 (2%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L +N+++  P++     +LR ++L +N++  LP+ +     L +L+  NN L+A  LP+ 
Sbjct: 235 LNYNSITSIPNDIGDLVSLREINLGSNKLELLPETLGQLVNLESLVLGNNNLSA--LPES 292

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
            S L  L+V +L GN+L + P +I  +  L+ L+  +N L  +P+ +  L  L +  +G 
Sbjct: 293 ASRLVKLRVLDLEGNRLTRLP-EIGSLAALEELHAQSNRLTALPQSLGNLHALRLFYVGE 351

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
           N LT++P + G L  L +  ++DN+L  +P  ++N   L+ L L +N L  +P  + +
Sbjct: 352 NQLTELPLSIGQLKSLTSFHVNDNRLSDVPCELANCLKLQLLNLDDNPLTAIPPNVTS 409


>gi|225690585|ref|NP_766116.3| leucine-rich repeat-containing protein 1 isoform 2 [Mus musculus]
 gi|148694403|gb|EDL26350.1| leucine rich repeat containing 1, isoform CRA_b [Mus musculus]
          Length = 479

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/209 (38%), Positives = 118/209 (56%), Gaps = 7/209 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 107 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS- 165

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L YL +  N L  +P  I KL KL 
Sbjct: 166 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLS 224

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L L  N LT +P+  GD   L  L+L++N+L +LP SI  LK L +L    NKL +LP 
Sbjct: 225 ILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPK 284

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           EI    C S  L    + +N+L  LP E+
Sbjct: 285 EIG--GCCS--LTMFCIRDNRLTRLPAEV 309



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/214 (36%), Positives = 110/214 (51%), Gaps = 12/214 (5%)

Query: 70  FFPDNASKF---TNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTAESLPKDMSN 124
           + P +A +F     LR L LS+N I  LP  I NF  L  L ++RN++     +P+ ++ 
Sbjct: 2   WGPSSAKQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDI---PEIPESIAF 58

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
            K L+V + SGN L + P    ++  L  L + + SL  +P  I  L  L  L L  N L
Sbjct: 59  CKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLL 118

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T +PD+   L +LE L L +N++ +LP SI  L  LK L L  N+L  LP EI  LK   
Sbjct: 119 TYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLK--- 175

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             L  L +  N+L  LP EI  L  L+ L +  N
Sbjct: 176 -NLLCLDVSENRLERLPEEISGLTSLTYLVISQN 208



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 124/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N++   P++ +    L+  D S N +T LP++  
Sbjct: 21  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFP 80

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 81  ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 139

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            + ++P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 140 EIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTS 199

Query: 220 LKSLLLHNNKLRTLP-------------------TEIITLKCLSEKLKSLLLHNNKLRTL 260
           L  L++  N L T+P                   T++       E L  L+L  N+L TL
Sbjct: 200 LTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTL 259

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK LS L+   N LV
Sbjct: 260 PKSIGKLKKLSNLNADRNKLV 280



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 96/218 (44%), Gaps = 29/218 (13%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN+    PE+I  LL      L  N LS  P       NL  LD+S NR+  LP+ I+
Sbjct: 136 LGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEIS 195

Query: 100 NF-PLSTLIARNNLLTA---------------------ESLPKDMSNLKNLKVFNLSGNQ 137
               L+ L+   NLL                         LP+ + + +NL    L+ N+
Sbjct: 196 GLTSLTYLVISQNLLETIPEGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENR 255

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           L   P  I  +  L  L    N L  +P+EI   C L +  +  N LT +P       +L
Sbjct: 256 LLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTMFCIRDNRLTRLPAEVSQAVEL 315

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
             L ++ N+L  LP S++ LK LK+L L +N+ + L T
Sbjct: 316 HVLDVAGNRLHHLPLSLTTLK-LKALWLSDNQSQPLLT 352



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 66/196 (33%), Positives = 90/196 (45%), Gaps = 26/196 (13%)

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK-LHVLS 178
           K    L  L+   LS N++++ P +I +   L  L +  N +  +P  I   CK L V  
Sbjct: 8   KQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESI-AFCKALQVAD 66

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
             GN LT +P++F +L  L  L ++D  L+SLP +I NL  L SL L  N L  LP  + 
Sbjct: 67  FSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLT 126

Query: 239 TLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLK---CL--SELS 274
            L+ L E                    LK L L  N+L  LP EI  LK   CL  SE  
Sbjct: 127 QLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENR 186

Query: 275 LRDNPLVIRFVSDMTY 290
           L   P  I  ++ +TY
Sbjct: 187 LERLPEEISGLTSLTY 202


>gi|254410000|ref|ZP_05023780.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
 gi|196183036|gb|EDX78020.1| Ras family, putative [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1115

 Score =  107 bits (267), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 92/242 (38%), Positives = 123/242 (50%), Gaps = 13/242 (5%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L  N   + PE+I  L+      L  N L+  P++ S+  NL  LDLS+N++T +P++IT
Sbjct: 6   LSGNQLTQVPESISQLVNLTELDLSVNQLTQVPESISQLVNLTQLDLSHNQLTQVPESIT 65

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L+ L    N LT   +P+ +S L NL   NLSGNQL Q    I  +  L  L L  
Sbjct: 66  QLVNLTKLNLSVNQLT--QVPESISQLVNLTKLNLSGNQLTQVSESISQLVNLTQLSLSG 123

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L   P  I++L  L  LSL  N LT +P++   L  L  L LS NQL  +P SIS L 
Sbjct: 124 NQLTQFPESISQLVNLTQLSLSRNQLTQVPESISQLVNLTQLNLSYNQLTQVPESISQLV 183

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L  L L  NKL  +P  I  L  L++    L L  N+L  +   I  L  L++LSL  N
Sbjct: 184 NLTQLDLSVNKLTQVPESISQLVNLTQ----LNLSYNQLTQVSESISQLVNLTQLSLSGN 239

Query: 279 PL 280
            L
Sbjct: 240 KL 241



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 102/303 (33%), Positives = 139/303 (45%), Gaps = 42/303 (13%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L  N   + PE+I  L+      L  N L+  P++ S+  NL  L+LS N++T +P++I+
Sbjct: 121 LSGNQLTQFPESISQLVNLTQLSLSRNQLTQVPESISQLVNLTQLNLSYNQLTQVPESIS 180

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L+ L    N LT   +P+ +S L NL   NLS NQL Q    I  +  L  L L  
Sbjct: 181 QLVNLTQLDLSVNKLT--QVPESISQLVNLTQLNLSYNQLTQVSESISQLVNLTQLSLSG 238

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  V   I++L  L  LSL GN LT +P++   L  L  L LSDNQL  +  SIS L 
Sbjct: 239 NKLTQVSESISQLVNLTQLSLSGNKLTQVPESISQLVNLTQLSLSDNQLTQVSESISQLV 298

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSE-------------------KLKSLLLHNNKLRT 259
            L  L L +N+L  +   I  L  L++                    L  L L  NKL  
Sbjct: 299 NLTQLDLSSNQLTQVSESISQLVNLTQLDLSSNQLTQVSESISQLVNLTQLNLSINKLTQ 358

Query: 260 LPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTL------KVHEIDYSQE 313
           +P  I  L  L+ L+L DN L        T  P S+ +L + T       K+ EI    E
Sbjct: 359 VPESISQLVNLTWLNLSDNQL--------TQVPESISQLVNLTQLDLFGNKITEIPDWLE 410

Query: 314 HLP 316
            LP
Sbjct: 411 ELP 413



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 92/274 (33%), Positives = 136/274 (49%), Gaps = 19/274 (6%)

Query: 22  VSIKTLDFSYSSLDS--ETLATQIEL----LPNNDYNKKPENIDTLL------LYHNNLS 69
           V++  L+ SY+ L    E+++  + L    L  N   + PE+I  L+      L +N L+
Sbjct: 160 VNLTQLNLSYNQLTQVPESISQLVNLTQLDLSVNKLTQVPESISQLVNLTQLNLSYNQLT 219

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNL 128
              ++ S+  NL  L LS N++T + ++I+    L+ L    N LT   +P+ +S L NL
Sbjct: 220 QVSESISQLVNLTQLSLSGNKLTQVSESISQLVNLTQLSLSGNKLT--QVPESISQLVNL 277

Query: 129 KVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
              +LS NQL Q    I  +  L  L L +N L  V   I++L  L  L L  N LT + 
Sbjct: 278 TQLSLSDNQLTQVSESISQLVNLTQLDLSSNQLTQVSESISQLVNLTQLDLSSNQLTQVS 337

Query: 189 DTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLK 248
           ++   L  L  L LS N+L  +P SIS L  L  L L +N+L  +P  I  L  L++   
Sbjct: 338 ESISQLVNLTQLNLSINKLTQVPESISQLVNLTWLNLSDNQLTQVPESISQLVNLTQ--- 394

Query: 249 SLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            L L  NK+  +P  +  L  L EL LR NPL I
Sbjct: 395 -LDLFGNKITEIPDWLEELPNLKELDLRQNPLPI 427



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 74/150 (49%), Gaps = 4/150 (2%)

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NLSGNQL Q P  I  +  L  L L  N L  VP  I++L  L  L L  N LT +P++
Sbjct: 4   LNLSGNQLTQVPESISQLVNLTELDLSVNQLTQVPESISQLVNLTQLDLSHNQLTQVPES 63

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
              L  L  L LS NQL  +P SIS L  L  L L  N+L  +   I  L  L++    L
Sbjct: 64  ITQLVNLTKLNLSVNQLTQVPESISQLVNLTKLNLSGNQLTQVSESISQLVNLTQ----L 119

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            L  N+L   P  I  L  L++LSL  N L
Sbjct: 120 SLSGNQLTQFPESISQLVNLTQLSLSRNQL 149



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 49/143 (34%), Positives = 71/143 (49%), Gaps = 3/143 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L  N L+   ++ S+  NL  LDLS+N++T + ++I+    L+ L    N LT 
Sbjct: 299 NLTQLDLSSNQLTQVSESISQLVNLTQLDLSSNQLTQVSESISQLVNLTQLNLSINKLT- 357

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+ +S L NL   NLS NQL Q P  I  +  L  L L  N +  +P  + +L  L 
Sbjct: 358 -QVPESISQLVNLTWLNLSDNQLTQVPESISQLVNLTQLDLFGNKITEIPDWLEELPNLK 416

Query: 176 VLSLGGNSLTDIPDTFGDLYQLE 198
            L L  N L   P+  G  Y  E
Sbjct: 417 ELDLRQNPLPISPEILGSPYHQE 439



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 48/130 (36%), Positives = 64/130 (49%), Gaps = 4/130 (3%)

Query: 151 LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           +  L L  N L  VP  I++L  L  L L  N LT +P++   L  L  L LS NQL  +
Sbjct: 1   MTQLNLSGNQLTQVPESISQLVNLTELDLSVNQLTQVPESISQLVNLTQLDLSHNQLTQV 60

Query: 211 PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
           P SI+ L  L  L L  N+L  +P  I  L  L++    L L  N+L  +   I  L  L
Sbjct: 61  PESITQLVNLTKLNLSVNQLTQVPESISQLVNLTK----LNLSGNQLTQVSESISQLVNL 116

Query: 271 SELSLRDNPL 280
           ++LSL  N L
Sbjct: 117 TQLSLSGNQL 126


>gi|418694604|ref|ZP_13255639.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|409957543|gb|EKO16449.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
          Length = 262

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 119/229 (51%), Gaps = 7/229 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N L+  P    +   LR L+L+ N++T LP+ +     L  L   +N  T
Sbjct: 17  QNLEKLNLVSNQLTSLPKEIGRLQKLRVLNLAGNQLTSLPKEMELLQNLEILNLDDNEFT 76

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             S PK+   L+ L++ NL+ NQL   P ++  +  L+ L L  N    +P+E+  L  L
Sbjct: 77  --SFPKETRQLQKLRILNLADNQLTSLPKEMELLQNLERLDLAGNRFKILPKEMELLQNL 134

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L+LG N  T  P        L+ L LS NQL++L   I  L+ L+SL L  N+L ++P
Sbjct: 135 EALNLGHNQFTSFPKEIRRQQNLKWLYLSRNQLKTLSKEIVELQNLQSLHLDGNQLSSIP 194

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
            EI  L+ L E    L L NNKL+TLP EI  L+ L  L L  NP   +
Sbjct: 195 KEIGQLQNLFE----LNLQNNKLKTLPKEIGLLQNLQALRLYSNPFSFK 239



 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 79/204 (38%), Positives = 110/204 (53%), Gaps = 7/204 (3%)

Query: 78  FTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGN 136
             NL  L+L +N++T LP+ I     L  L    N LT  SLPK+M  L+NL++ NL  N
Sbjct: 16  LQNLEKLNLVSNQLTSLPKEIGRLQKLRVLNLAGNQLT--SLPKEMELLQNLEILNLDDN 73

Query: 137 QLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQ 196
           +   FP +   +  L+ L L +N L  +P+E+  L  L  L L GN    +P     L  
Sbjct: 74  EFTSFPKETRQLQKLRILNLADNQLTSLPKEMELLQNLERLDLAGNRFKILPKEMELLQN 133

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
           LEAL L  NQ  S P  I   + LK L L  N+L+TL  EI+ L    + L+SL L  N+
Sbjct: 134 LEALNLGHNQFTSFPKEIRRQQNLKWLYLSRNQLKTLSKEIVEL----QNLQSLHLDGNQ 189

Query: 257 LRTLPTEIITLKCLSELSLRDNPL 280
           L ++P EI  L+ L EL+L++N L
Sbjct: 190 LSSIPKEIGQLQNLFELNLQNNKL 213


>gi|398339547|ref|ZP_10524250.1| hypothetical protein LkirsB1_08705 [Leptospira kirschneri serovar
           Bim str. 1051]
          Length = 330

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/210 (38%), Positives = 114/210 (54%), Gaps = 7/210 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           EN+ TL L  NNL+  P+   +  NL SL LS N++  LP+ I     L  L   +N   
Sbjct: 88  ENLLTLYLSGNNLNSLPNEMGQLKNLISLYLSGNKLISLPKEIRQLGNLGILHLFDN--E 145

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+++  L+NLK+ ++S N+   FP +   +  L  L L NN L  +P+EI +L  L
Sbjct: 146 FNTLPEEIGELENLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQLTTLPKEIGQLENL 205

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  N L  +P+  G L  L+ L L+ N L +LP  I  LK L  L L +N+L  LP
Sbjct: 206 FILHLSVNKLNSLPNEMGQLKNLDVLYLNGNNLSNLPEEIGELKKLSILKLDSNQLTILP 265

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
            EI  L    E L +L L NNKL ++P E+
Sbjct: 266 KEIGQL----ENLVTLSLSNNKLISIPNEL 291



 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 95/272 (34%), Positives = 129/272 (47%), Gaps = 47/272 (17%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI--------------- 98
           K EN+ TL +  N +S FP    K  NL  L L+ NR+++LP+ I               
Sbjct: 17  KLENLKTLDITRNRISTFPKEFWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQ 76

Query: 99  -TNFP---------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDI 148
            T  P         L+  ++ NNL    SLP +M  LKNL    LSGN+L   P +I  +
Sbjct: 77  LTTLPKEIGQLENLLTLYLSGNNL---NSLPNEMGQLKNLISLYLSGNKLISLPKEIRQL 133

Query: 149 PTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLE 208
             L  L+L +N  N +P EI +L  L +L +  N  +  P  F  L +L  L LS+NQL 
Sbjct: 134 GNLGILHLFDNEFNTLPEEIGELENLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQLT 193

Query: 209 SLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKS 249
           +LP  I  L+ L  L L  NKL +LP E+  LK L                    +KL  
Sbjct: 194 TLPKEIGQLENLFILHLSVNKLNSLPNEMGQLKNLDVLYLNGNNLSNLPEEIGELKKLSI 253

Query: 250 LLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L L +N+L  LP EI  L+ L  LSL +N L+
Sbjct: 254 LKLDSNQLTILPKEIGQLENLVTLSLSNNKLI 285



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 91/268 (33%), Positives = 122/268 (45%), Gaps = 55/268 (20%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRI-----------------------THLPQAI- 98
           L +N L+  P+   K  NL++LD++ NRI                       ++LP+ I 
Sbjct: 3   LLNNELTTLPEEIGKLENLKTLDITRNRISTFPKEFWKLKNLEVLFLNGNRLSYLPEEIR 62

Query: 99  ---------------TNFP---------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLS 134
                          T  P         L+  ++ NNL    SLP +M  LKNL    LS
Sbjct: 63  ELNRLNVLNLNDNQLTTLPKEIGQLENLLTLYLSGNNL---NSLPNEMGQLKNLISLYLS 119

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
           GN+L   P +I  +  L  L+L +N  N +P EI +L  L +L +  N  +  P  F  L
Sbjct: 120 GNKLISLPKEIRQLGNLGILHLFDNEFNTLPEEIGELENLKILDISRNRFSTFPKEFWKL 179

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
            +L  L LS+NQL +LP  I  L+ L  L L  NKL +LP E+  LK L      L L+ 
Sbjct: 180 KKLNVLNLSNNQLTTLPKEIGQLENLFILHLSVNKLNSLPNEMGQLKNLD----VLYLNG 235

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPLVI 282
           N L  LP EI  LK LS L L  N L I
Sbjct: 236 NNLSNLPEEIGELKKLSILKLDSNQLTI 263



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 89/160 (55%), Gaps = 3/160 (1%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L+ N  +  P+   +  NL+ LD+S NR +  P+       L+ L   NN LT 
Sbjct: 135 NLGILHLFDNEFNTLPEEIGELENLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQLT- 193

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LPK++  L+NL + +LS N+L   P ++  +  L  LYL  N+L+++P EI +L KL 
Sbjct: 194 -TLPKEIGQLENLFILHLSVNKLNSLPNEMGQLKNLDVLYLNGNNLSNLPEEIGELKKLS 252

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           +L L  N LT +P   G L  L  L LS+N+L S+P  + 
Sbjct: 253 ILKLDSNQLTILPKEIGQLENLVTLSLSNNKLISIPNELG 292



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 53/128 (41%), Positives = 67/128 (52%), Gaps = 4/128 (3%)

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           +YL NN L  +P EI KL  L  L +  N ++  P  F  L  LE L L+ N+L  LP  
Sbjct: 1   MYLLNNELTTLPEEIGKLENLKTLDITRNRISTFPKEFWKLKNLEVLFLNGNRLSYLPEE 60

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           I  L  L  L L++N+L TLP EI  L    E L +L L  N L +LP E+  LK L  L
Sbjct: 61  IRELNRLNVLNLNDNQLTTLPKEIGQL----ENLLTLYLSGNNLNSLPNEMGQLKNLISL 116

Query: 274 SLRDNPLV 281
            L  N L+
Sbjct: 117 YLSGNKLI 124


>gi|194745132|ref|XP_001955046.1| GF16442 [Drosophila ananassae]
 gi|190628083|gb|EDV43607.1| GF16442 [Drosophila ananassae]
          Length = 1847

 Score =  107 bits (266), Expect = 1e-20,   Method: Composition-based stats.
 Identities = 84/251 (33%), Positives = 126/251 (50%), Gaps = 15/251 (5%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           +++L L  N L   P+  S+ T L+ LDL +N I  LP  +   P L  L   +N L  +
Sbjct: 154 LESLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQL--Q 211

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            LP ++  L  L   ++S N+LE+ P +I  + +L  L L  N L  +P  I KL +L +
Sbjct: 212 RLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLLETLPDGIAKLSRLTI 271

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L  + DT G+   ++ LIL++N L  LP SI  +  L +L +  N L  LP E
Sbjct: 272 LKLDQNRLQRLNDTLGNCVNMQELILTENFLSELPPSIGQMTKLSNLNVDRNALEYLPLE 331

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
           I   +C +  L  L L +NKL+ LP E+     L  L +  N L+        Y P SL+
Sbjct: 332 I--GQCAN--LGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLL--------YLPYSLV 379

Query: 297 ELASRTLKVHE 307
            L  + + + E
Sbjct: 380 NLQLKAVWLSE 390



 Score =  106 bits (264), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 75/225 (33%), Positives = 115/225 (51%), Gaps = 9/225 (4%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTA 115
           ++ L L  N++   P N  +   LR L LS+N I  LP  I NF   +   ++RN++   
Sbjct: 39  LEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEINRLPPDIQNFENLVELDVSRNDI--- 95

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P D+ +L++L+V + S N + + P     +  L  L L + SL  +P +   L +L 
Sbjct: 96  PDIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLE 155

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L  +P+T   L +L+ L L DN++E LP  +  L  L  L L +N+L+ LP 
Sbjct: 156 SLELRENLLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPP 215

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           E+  L     KL  L +  N+L  LP EI  L  L++L L  N L
Sbjct: 216 ELGLLT----KLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLL 256



 Score =  103 bits (257), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 84/241 (34%), Positives = 110/241 (45%), Gaps = 7/241 (2%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A  I  LP N +  +   +  L L  N ++  P +   F NL  LD+S N I  +P  I 
Sbjct: 46  ANHIRDLPKNFF--RLHRLRKLGLSDNEINRLPPDIQNFENLVELDVSRNDIPDIPDDIK 103

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
           +   S  +A  +      LP   S LKNL V  L+   L   P     +  L+ L L  N
Sbjct: 104 HLQ-SLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLTQLESLELREN 162

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L H+P  I++L KL  L LG N + D+P   G L  L  L L  NQL+ LP  +  L  
Sbjct: 163 LLKHLPETISQLTKLKRLDLGDNEIEDLPPYLGYLPGLHELWLDHNQLQRLPPELGLLTK 222

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L  L +  N+L  LP EI  L  L++    L L  N L TLP  I  L  L+ L L  N 
Sbjct: 223 LTYLDVSENRLEELPNEISGLVSLTD----LDLAQNLLETLPDGIAKLSRLTILKLDQNR 278

Query: 280 L 280
           L
Sbjct: 279 L 279



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Composition-based stats.
 Identities = 64/199 (32%), Positives = 90/199 (45%), Gaps = 27/199 (13%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L HN L   P      T L  LD+S NR+  LP  I+    L+ L    NLL  E+LP
Sbjct: 203 LWLDHNQLQRLPPELGLLTKLTYLDVSENRLEELPNEISGLVSLTDLDLAQNLL--ETLP 260

Query: 120 KDMSNLKNLKVFNLSGNQLE-----------------------QFPIQILDIPTLKYLYL 156
             ++ L  L +  L  N+L+                       + P  I  +  L  L +
Sbjct: 261 DGIAKLSRLTILKLDQNRLQRLNDTLGNCVNMQELILTENFLSELPPSIGQMTKLSNLNV 320

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
             N+L ++P EI +   L VLSL  N L  +P   G+   L  L +S NQL  LP S+ N
Sbjct: 321 DRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNCTVLHVLDVSGNQLLYLPYSLVN 380

Query: 217 LKMLKSLLLHNNKLRTLPT 235
           L+ LK++ L  N+ + L T
Sbjct: 381 LQ-LKAVWLSENQSQPLLT 398



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Composition-based stats.
 Identities = 50/155 (32%), Positives = 72/155 (46%), Gaps = 4/155 (2%)

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           + L+   L  N +   P     +  L+ L L +N +N +P +I     L  L +  N + 
Sbjct: 37  RTLEELFLDANHIRDLPKNFFRLHRLRKLGLSDNEINRLPPDIQNFENLVELDVSRNDIP 96

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           DIPD    L  L+    S N +  LP+  S LK L  L L++  L TLP +  +L     
Sbjct: 97  DIPDDIKHLQSLQVADFSSNPIPKLPSGFSQLKNLTVLGLNDMSLTTLPADFGSLT---- 152

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +L+SL L  N L+ LP  I  L  L  L L DN +
Sbjct: 153 QLESLELRENLLKHLPETISQLTKLKRLDLGDNEI 187



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 51/155 (32%), Positives = 75/155 (48%), Gaps = 4/155 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTA 115
           ++  L L  N L   PD  +K + L  L L  NR+  L   + N   +  LI   N L+ 
Sbjct: 245 SLTDLDLAQNLLETLPDGIAKLSRLTILKLDQNRLQRLNDTLGNCVNMQELILTENFLS- 303

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP  +  +  L   N+  N LE  P++I     L  L L +N L  +P E+     LH
Sbjct: 304 -ELPPSIGQMTKLSNLNVDRNALEYLPLEIGQCANLGVLSLRDNKLKRLPPELGNCTVLH 362

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           VL + GN L  +P +  +L QL+A+ LS+NQ + L
Sbjct: 363 VLDVSGNQLLYLPYSLVNL-QLKAVWLSENQSQPL 396


>gi|359728069|ref|ZP_09266765.1| hypothetical protein Lwei2_14567 [Leptospira weilii str.
           2006001855]
          Length = 262

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/237 (35%), Positives = 118/237 (49%), Gaps = 22/237 (9%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           N+  L L +N L   P    +  NL  L L NN++  LP+ I     S  +   +     
Sbjct: 2   NVSVLNLENNELRILPQEIGQLRNLEVLYLHNNQLRILPKEIGGQLESLELLDLSNNGLR 61

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN------------------ 158
           +LP+++  L+NL+V  L  NQL   P +I  +  L+ L L +                  
Sbjct: 62  TLPQEIGQLRNLEVLYLHNNQLRTLPKEIGQLRNLRILDLSDVIPGYYVAMGLSLKLDSF 121

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P+EI +L  L VL L  N L  +P   G L  L+ L L +N+L +LP  I  L+
Sbjct: 122 NQLRTLPKEIGQLVNLEVLYLHNNQLRTLPKEIGQLRNLKTLHLENNRLRTLPQEIGQLR 181

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            L+ L+L NN+L TLP EI  L+     LK+L L NN+LRTLP EI  L+ L  L L
Sbjct: 182 NLEVLVLENNELTTLPQEIGQLR----NLKTLHLLNNRLRTLPKEIRQLQNLRTLYL 234



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 73/196 (37%), Positives = 90/196 (45%), Gaps = 46/196 (23%)

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYL------------------------GNNSLN 162
           N+ V NL  N+L   P +I  +  L+ LYL                         NN L 
Sbjct: 2   NVSVLNLENNELRILPQEIGQLRNLEVLYLHNNQLRILPKEIGGQLESLELLDLSNNGLR 61

Query: 163 HVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD------------------ 204
            +P+EI +L  L VL L  N L  +P   G L  L  L LSD                  
Sbjct: 62  TLPQEIGQLRNLEVLYLHNNQLRTLPKEIGQLRNLRILDLSDVIPGYYVAMGLSLKLDSF 121

Query: 205 NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           NQL +LP  I  L  L+ L LHNN+LRTLP EI  L+     LK+L L NN+LRTLP EI
Sbjct: 122 NQLRTLPKEIGQLVNLEVLYLHNNQLRTLPKEIGQLR----NLKTLHLENNRLRTLPQEI 177

Query: 265 ITLKCLSELSLRDNPL 280
             L+ L  L L +N L
Sbjct: 178 GQLRNLEVLVLENNEL 193


>gi|418677552|ref|ZP_13238826.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|418687293|ref|ZP_13248452.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|418742391|ref|ZP_13298764.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
 gi|400320742|gb|EJO68602.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. RM52]
 gi|410737617|gb|EKQ82356.1| leucine rich repeat protein [Leptospira kirschneri serovar
           Grippotyphosa str. Moskva]
 gi|410750749|gb|EKR07729.1| leucine rich repeat protein [Leptospira kirschneri serovar Valbuzzi
           str. 200702274]
          Length = 403

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/210 (38%), Positives = 114/210 (54%), Gaps = 7/210 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           EN+ TL L  NNL+  P+   +  NL SL LS N++  LP+ I     L  L   +N   
Sbjct: 161 ENLLTLYLSGNNLNSLPNEMGQLKNLISLYLSGNKLISLPKEIRQLGNLGILHLFDN--E 218

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+++  L+NLK+ ++S N+   FP +   +  L  L L NN L  +P+EI +L  L
Sbjct: 219 FNTLPEEIGELENLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQLTTLPKEIGQLENL 278

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  N L  +P+  G L  L+ L L+ N L +LP  I  LK L  L L +N+L  LP
Sbjct: 279 FILHLSVNKLNSLPNEMGQLKNLDVLYLNGNNLSNLPEEIGELKKLSILKLDSNQLTILP 338

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
            EI  L    E L +L L NNKL ++P E+
Sbjct: 339 KEIGQL----ENLVTLSLSNNKLISIPNEL 364



 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/272 (34%), Positives = 129/272 (47%), Gaps = 47/272 (17%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI--------------- 98
           K EN+ TL +  N +S FP    K  NL  L L+ NR+++LP+ I               
Sbjct: 90  KLENLKTLDITRNRISTFPKEFWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQ 149

Query: 99  -TNFP---------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDI 148
            T  P         L+  ++ NNL    SLP +M  LKNL    LSGN+L   P +I  +
Sbjct: 150 LTTLPKEIGQLENLLTLYLSGNNL---NSLPNEMGQLKNLISLYLSGNKLISLPKEIRQL 206

Query: 149 PTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLE 208
             L  L+L +N  N +P EI +L  L +L +  N  +  P  F  L +L  L LS+NQL 
Sbjct: 207 GNLGILHLFDNEFNTLPEEIGELENLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQLT 266

Query: 209 SLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKS 249
           +LP  I  L+ L  L L  NKL +LP E+  LK L                    +KL  
Sbjct: 267 TLPKEIGQLENLFILHLSVNKLNSLPNEMGQLKNLDVLYLNGNNLSNLPEEIGELKKLSI 326

Query: 250 LLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L L +N+L  LP EI  L+ L  LSL +N L+
Sbjct: 327 LKLDSNQLTILPKEIGQLENLVTLSLSNNKLI 358



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/246 (34%), Positives = 117/246 (47%), Gaps = 26/246 (10%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT- 114
           N++ L L +N L+  P+   K  NL++LD++ NRI+  P+       L  L    N L+ 
Sbjct: 70  NLERLYLLNNELTTLPEEIGKLENLKTLDITRNRISTFPKEFWKLKNLEVLFLNGNRLSY 129

Query: 115 --------------------AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYL 154
                                 +LPK++  L+NL    LSGN L   P ++  +  L  L
Sbjct: 130 LPEEIRELNRLNVLNLNDNQLTTLPKEIGQLENLLTLYLSGNNLNSLPNEMGQLKNLISL 189

Query: 155 YLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASI 214
           YL  N L  +P+EI +L  L +L L  N    +P+  G+L  L+ L +S N+  + P   
Sbjct: 190 YLSGNKLISLPKEIRQLGNLGILHLFDNEFNTLPEEIGELENLKILDISRNRFSTFPKEF 249

Query: 215 SNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
             LK L  L L NN+L TLP EI  L    E L  L L  NKL +LP E+  LK L  L 
Sbjct: 250 WKLKKLNVLNLSNNQLTTLPKEIGQL----ENLFILHLSVNKLNSLPNEMGQLKNLDVLY 305

Query: 275 LRDNPL 280
           L  N L
Sbjct: 306 LNGNNL 311



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/231 (39%), Positives = 120/231 (51%), Gaps = 9/231 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARN 110
           K P  +  L L  N L+  P    +  NL  L L NN +T LP+ I     L TL I RN
Sbjct: 43  KTPNEVRILDLSSNRLTTLPKEIGQLVNLERLYLLNNELTTLPEEIGKLENLKTLDITRN 102

Query: 111 NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
            + T    PK+   LKNL+V  L+GN+L   P +I ++  L  L L +N L  +P+EI +
Sbjct: 103 RIST---FPKEFWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQLTTLPKEIGQ 159

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L  L L GN+L  +P+  G L  L +L LS N+L SLP  I  L  L  L L +N+ 
Sbjct: 160 LENLLTLYLSGNNLNSLPNEMGQLKNLISLYLSGNKLISLPKEIRQLGNLGILHLFDNEF 219

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            TLP EI  L    E LK L +  N+  T P E   LK L+ L+L +N L 
Sbjct: 220 NTLPEEIGEL----ENLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQLT 266



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/160 (36%), Positives = 89/160 (55%), Gaps = 3/160 (1%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L+ N  +  P+   +  NL+ LD+S NR +  P+       L+ L   NN LT 
Sbjct: 208 NLGILHLFDNEFNTLPEEIGELENLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQLT- 266

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LPK++  L+NL + +LS N+L   P ++  +  L  LYL  N+L+++P EI +L KL 
Sbjct: 267 -TLPKEIGQLENLFILHLSVNKLNSLPNEMGQLKNLDVLYLNGNNLSNLPEEIGELKKLS 325

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           +L L  N LT +P   G L  L  L LS+N+L S+P  + 
Sbjct: 326 ILKLDSNQLTILPKEIGQLENLVTLSLSNNKLISIPNELG 365


>gi|421130781|ref|ZP_15590973.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410357884|gb|EKP05089.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 312

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/247 (36%), Positives = 129/247 (52%), Gaps = 10/247 (4%)

Query: 40  ATQIELLPNNDYNKK---PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQ 96
           A ++EL    D  K    P ++  L L    L+  P    +  NL+SL LS+N++T LP+
Sbjct: 29  AEEVELGTYIDLTKALQNPLDVRVLNLSGQKLTSLPKEIGQLKNLQSLYLSDNQLTILPK 88

Query: 97  AITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLY 155
            I     L  L    N L    LP ++  LKNL+  +L  N+L   P +I  +  L+ L+
Sbjct: 89  EIVELQNLEHLDLSENQLVI--LPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLW 146

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
              N L  +P+EI +L  L  L+L  N LT +P   G L  L+ L LS NQL +LP  I 
Sbjct: 147 SPENRLAILPKEIGQLENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIG 206

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            L+ L+ L L  N+L TLP  I  L    + L++L LH N+L  LP E   L+ L +L+L
Sbjct: 207 QLRNLQELNLKWNQLVTLPKGIGRL----QNLQTLDLHENRLTILPREFGQLQSLQKLNL 262

Query: 276 RDNPLVI 282
            +N L+I
Sbjct: 263 VNNRLII 269



 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/210 (38%), Positives = 111/210 (52%), Gaps = 7/210 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ +L L  N L+  P    +  NL  LDLS N++  LP  I     L +L    N LT
Sbjct: 71  KNLQSLYLSDNQLTILPKEIVELQNLEHLDLSENQLVILPNEIGRLKNLQSLDLYKNKLT 130

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL++     N+L   P +I  +  L+ L L  N L  VP+EI +L  L
Sbjct: 131 --TLPKEIGQLQNLQMLWSPENRLAILPKEIGQLENLENLNLSENRLTTVPKEIGQLKNL 188

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L GN L  +P+  G L  L+ L L  NQL +LP  I  L+ L++L LH N+L  LP
Sbjct: 189 QELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVTLPKGIGRLQNLQTLDLHENRLTILP 248

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
            E   L+     L+ L L NN+L  LP EI
Sbjct: 249 REFGQLQS----LQKLNLVNNRLIILPKEI 274



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/109 (36%), Positives = 54/109 (49%), Gaps = 4/109 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           CK+    +   +  D+     +   +  L LS  +L SLP  I  LK L+SL L +N+L 
Sbjct: 25  CKIQAEEVELGTYIDLTKALQNPLDVRVLNLSGQKLTSLPKEIGQLKNLQSLYLSDNQLT 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            LP EI+ L    + L+ L L  N+L  LP EI  LK L  L L  N L
Sbjct: 85  ILPKEIVEL----QNLEHLDLSENQLVILPNEIGRLKNLQSLDLYKNKL 129


>gi|421132053|ref|ZP_15592227.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410356605|gb|EKP03922.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 403

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/210 (38%), Positives = 114/210 (54%), Gaps = 7/210 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           EN+ TL L  NNL+  P+   +  NL SL LS N++  LP+ I     L  L   +N   
Sbjct: 161 ENLLTLYLSGNNLNSLPNEMGQLKNLISLYLSGNKLISLPKEIRQLGNLGILHLFDN--E 218

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+++  L+NLK+ ++S N+   FP +   +  L  L L NN L  +P+EI +L  L
Sbjct: 219 FNTLPEEIGKLENLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQLTTLPKEIGQLENL 278

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  N L  +P+  G L  L+ L L+ N L +LP  I  LK L  L L +N+L  LP
Sbjct: 279 FILHLSVNKLNSLPNEMGQLKNLDVLYLNGNNLSNLPEEIGELKKLSILKLDSNQLTILP 338

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
            EI  L    E L +L L NNKL ++P E+
Sbjct: 339 KEIGQL----ENLVTLSLSNNKLISIPNEL 364



 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/272 (35%), Positives = 129/272 (47%), Gaps = 47/272 (17%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI--------------- 98
           K EN+ TL +  N +S FP    K  NL  L L+ NR+++LP+ I               
Sbjct: 90  KLENLKTLDITRNRISTFPKEFWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQ 149

Query: 99  -TNFP---------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDI 148
            T  P         L+  ++ NNL    SLP +M  LKNL    LSGN+L   P +I  +
Sbjct: 150 LTTLPKEIGQLENLLTLYLSGNNL---NSLPNEMGQLKNLISLYLSGNKLISLPKEIRQL 206

Query: 149 PTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLE 208
             L  L+L +N  N +P EI KL  L +L +  N  +  P  F  L +L  L LS+NQL 
Sbjct: 207 GNLGILHLFDNEFNTLPEEIGKLENLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQLT 266

Query: 209 SLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKS 249
           +LP  I  L+ L  L L  NKL +LP E+  LK L                    +KL  
Sbjct: 267 TLPKEIGQLENLFILHLSVNKLNSLPNEMGQLKNLDVLYLNGNNLSNLPEEIGELKKLSI 326

Query: 250 LLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L L +N+L  LP EI  L+ L  LSL +N L+
Sbjct: 327 LKLDSNQLTILPKEIGQLENLVTLSLSNNKLI 358



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/274 (34%), Positives = 126/274 (45%), Gaps = 55/274 (20%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRI-----------------------TH 93
           N++ L L +N L+  P+   K  NL++LD++ NRI                       ++
Sbjct: 70  NLERLYLLNNELTTLPEEIGKLENLKTLDITRNRISTFPKEFWKLKNLEVLFLNGNRLSY 129

Query: 94  LPQAI----------------TNFP---------LSTLIARNNLLTAESLPKDMSNLKNL 128
           LP+ I                T  P         L+  ++ NNL    SLP +M  LKNL
Sbjct: 130 LPEEIRELNRLNVLNLNDNQLTTLPKEIGQLENLLTLYLSGNNL---NSLPNEMGQLKNL 186

Query: 129 KVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
               LSGN+L   P +I  +  L  L+L +N  N +P EI KL  L +L +  N  +  P
Sbjct: 187 ISLYLSGNKLISLPKEIRQLGNLGILHLFDNEFNTLPEEIGKLENLKILDISRNRFSTFP 246

Query: 189 DTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLK 248
             F  L +L  L LS+NQL +LP  I  L+ L  L L  NKL +LP E+  LK L     
Sbjct: 247 KEFWKLKKLNVLNLSNNQLTTLPKEIGQLENLFILHLSVNKLNSLPNEMGQLKNLD---- 302

Query: 249 SLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            L L+ N L  LP EI  LK LS L L  N L I
Sbjct: 303 VLYLNGNNLSNLPEEIGELKKLSILKLDSNQLTI 336



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 91/231 (39%), Positives = 120/231 (51%), Gaps = 9/231 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARN 110
           K P  +  L L  N L+  P    +  NL  L L NN +T LP+ I     L TL I RN
Sbjct: 43  KTPNEVRILDLSSNRLTTLPKEIGQLVNLERLYLLNNELTTLPEEIGKLENLKTLDITRN 102

Query: 111 NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
            + T    PK+   LKNL+V  L+GN+L   P +I ++  L  L L +N L  +P+EI +
Sbjct: 103 RIST---FPKEFWKLKNLEVLFLNGNRLSYLPEEIRELNRLNVLNLNDNQLTTLPKEIGQ 159

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L  L  L L GN+L  +P+  G L  L +L LS N+L SLP  I  L  L  L L +N+ 
Sbjct: 160 LENLLTLYLSGNNLNSLPNEMGQLKNLISLYLSGNKLISLPKEIRQLGNLGILHLFDNEF 219

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            TLP EI  L    E LK L +  N+  T P E   LK L+ L+L +N L 
Sbjct: 220 NTLPEEIGKL----ENLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQLT 266



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 89/160 (55%), Gaps = 3/160 (1%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L+ N  +  P+   K  NL+ LD+S NR +  P+       L+ L   NN LT 
Sbjct: 208 NLGILHLFDNEFNTLPEEIGKLENLKILDISRNRFSTFPKEFWKLKKLNVLNLSNNQLT- 266

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LPK++  L+NL + +LS N+L   P ++  +  L  LYL  N+L+++P EI +L KL 
Sbjct: 267 -TLPKEIGQLENLFILHLSVNKLNSLPNEMGQLKNLDVLYLNGNNLSNLPEEIGELKKLS 325

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
           +L L  N LT +P   G L  L  L LS+N+L S+P  + 
Sbjct: 326 ILKLDSNQLTILPKEIGQLENLVTLSLSNNKLISIPNELG 365


>gi|405965662|gb|EKC31024.1| Protein lap4 [Crassostrea gigas]
          Length = 1780

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/225 (35%), Positives = 118/225 (52%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ +L L  N + F P + S    L  LDL +N I  LP+ I + P L  L    N L  
Sbjct: 153 NLVSLELRENMIQFLPQSMSLLVKLEILDLGSNNIKELPEIIGSLPSLQELWLDCNEL-- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           + LP ++ NL+ L   ++S NQL   P +I  +  L  L L  N L  +P  I  L KL 
Sbjct: 211 QDLPPEIGNLRKLTQIDVSENQLTYIPDEICGLQNLTDLCLSQNDLEDIPEGIGSLKKLS 270

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L L  N L  +P   G+   L  LIL++N LE LP++I  L++L +L +  N+L+ +P 
Sbjct: 271 ILKLDQNKLGFLPQEIGNCESLTELILTENYLEELPSTIGRLRLLSNLNVDRNQLKEIPV 330

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI   +C+  +L  + L +N+L  LP E+  LK L  L +  N L
Sbjct: 331 EI--GQCV--RLNVVSLRDNRLLRLPQELGNLKELHVLDVSGNKL 371



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 86/239 (35%), Positives = 122/239 (51%), Gaps = 13/239 (5%)

Query: 49  NDYNKKPENI------DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP 102
           ND    PENI        L +  N L+  P+  ++  NL  L L++  +  LP  I +  
Sbjct: 93  NDIGDIPENIKFLKNLQVLDISSNPLTKLPEGFTQLRNLTHLGLNDISLMRLPPDIGSLT 152

Query: 103 -LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L +L  R N++  + LP+ MS L  L++ +L  N +++ P  I  +P+L+ L+L  N L
Sbjct: 153 NLVSLELRENMI--QFLPQSMSLLVKLEILDLGSNNIKELPEIIGSLPSLQELWLDCNEL 210

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +P EI  L KL  + +  N LT IPD    L  L  L LS N LE +P  I +LK L 
Sbjct: 211 QDLPPEIGNLRKLTQIDVSENQLTYIPDEICGLQNLTDLCLSQNDLEDIPEGIGSLKKLS 270

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            L L  NKL  LP EI   + L+E    L+L  N L  LP+ I  L+ LS L++  N L
Sbjct: 271 ILKLDQNKLGFLPQEIGNCESLTE----LILTENYLEELPSTIGRLRLLSNLNVDRNQL 325



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 82/266 (30%), Positives = 124/266 (46%), Gaps = 47/266 (17%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLT 114
           +++ LLL  N L   P    +   LR L LS+N I  LP  + N    +   I+RN++  
Sbjct: 38  SLEELLLDANQLKDLPKGFFRLVQLRKLSLSDNEIARLPPEVANLVNLMEMDISRNDI-- 95

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK---- 170
              +P+++  LKNL+V ++S N L + P     +  L +L L + SL  +P +I      
Sbjct: 96  -GDIPENIKFLKNLQVLDISSNPLTKLPEGFTQLRNLTHLGLNDISLMRLPPDIGSLTNL 154

Query: 171 -------------------LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
                              L KL +L LG N++ ++P+  G L  L+ L L  N+L+ LP
Sbjct: 155 VSLELRENMIQFLPQSMSLLVKLEILDLGSNNIKELPEIIGSLPSLQELWLDCNELQDLP 214

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLK-----CLSE--------------KLKSLLL 252
             I NL+ L  + +  N+L  +P EI  L+     CLS+              KL  L L
Sbjct: 215 PEIGNLRKLTQIDVSENQLTYIPDEICGLQNLTDLCLSQNDLEDIPEGIGSLKKLSILKL 274

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDN 278
             NKL  LP EI   + L+EL L +N
Sbjct: 275 DQNKLGFLPQEIGNCESLTELILTEN 300



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 64/202 (31%), Positives = 98/202 (48%), Gaps = 10/202 (4%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLTAESL 118
           L L  N L   P        L  +D+S N++T++P  I     L+ L +++N+L   E +
Sbjct: 203 LWLDCNELQDLPPEIGNLRKLTQIDVSENQLTYIPDEICGLQNLTDLCLSQNDL---EDI 259

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P+ + +LK L +  L  N+L   P +I +  +L  L L  N L  +P  I +L  L  L+
Sbjct: 260 PEGIGSLKKLSILKLDQNKLGFLPQEIGNCESLTELILTENYLEELPSTIGRLRLLSNLN 319

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           +  N L +IP   G   +L  + L DN+L  LP  + NLK L  L +  NKL  LP  I 
Sbjct: 320 VDRNQLKEIPVEIGQCVRLNVVSLRDNRLLRLPQELGNLKELHVLDVSGNKLEYLPITIT 379

Query: 239 TLKCLSEKLKSLLLHNNKLRTL 260
            L      L +L L  N+ + +
Sbjct: 380 NL-----HLNALWLSENQAKPM 396



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/183 (31%), Positives = 88/183 (48%), Gaps = 19/183 (10%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LPK    L  L+  +LS N++ + P ++ ++  L  + +  N +  +P  I  L  L VL
Sbjct: 52  LPKGFFRLVQLRKLSLSDNEIARLPPEVANLVNLMEMDISRNDIGDIPENIKFLKNLQVL 111

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT-- 235
            +  N LT +P+ F  L  L  L L+D  L  LP  I +L  L SL L  N ++ LP   
Sbjct: 112 DISSNPLTKLPEGFTQLRNLTHLGLNDISLMRLPPDIGSLTNLVSLELRENMIQFLPQSM 171

Query: 236 ------EIITL-----KCLSE------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
                 EI+ L     K L E       L+ L L  N+L+ LP EI  L+ L+++ + +N
Sbjct: 172 SLLVKLEILDLGSNNIKELPEIIGSLPSLQELWLDCNELQDLPPEIGNLRKLTQIDVSEN 231

Query: 279 PLV 281
            L 
Sbjct: 232 QLT 234


>gi|434387880|ref|YP_007098491.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
           PCC 6605]
 gi|428018870|gb|AFY94964.1| Leucine Rich Repeat (LRR)-containing protein [Chamaesiphon minutus
           PCC 6605]
          Length = 709

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/210 (38%), Positives = 111/210 (52%), Gaps = 8/210 (3%)

Query: 73  DNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVF 131
           D       L  L L NN +T LP+ I     LS L   NN +    L K+  NL NL+  
Sbjct: 315 DGIGNLKMLNELHLGNNCLTSLPENIGKLTKLSCLQLINNKIV--DLTKNFGNLVNLRKL 372

Query: 132 NLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTF 191
           NL+GN + + P  I ++  LK LYL  N+L  +P  I  L  L +L LG N ++++PDT 
Sbjct: 373 NLNGNNINRLPDDIGNLKKLKELYLWKNNLEKLPDSIGNLTSLSILDLGRNQISELPDTI 432

Query: 192 GDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLL 251
           G+L+ +E L L  N+L  LP +ISNL+ +  L L  N ++ LP  +  L      LK L 
Sbjct: 433 GNLHNIEKLDLYKNRLTCLPETISNLQSISHLYLQRNYIKLLPEGMGNLT----NLKKLK 488

Query: 252 LHNNKLRTLPTEIITLKC-LSELSLRDNPL 280
           + NN+LR LP  I  L   L  L +R+N L
Sbjct: 489 IWNNRLRCLPESIGNLAANLQSLKIRNNRL 518



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 84/271 (30%), Positives = 131/271 (48%), Gaps = 40/271 (14%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           K E    L L  N L+F PD     T+L  L ++   +T LP++I N   L+ L  RN  
Sbjct: 14  KRERWSILRLGVNQLTFLPDTIGDLTDLTELHITWFSLTSLPESIGNLSKLTRLYVRNTK 73

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS-LNHVPREINKL 171
           +    LP+ + NL NLK  +L+ N +E  P  I D+  L +L L + + L  +P  I  L
Sbjct: 74  IA--RLPESIGNLSNLKELDLTWNLIEILPTSIGDLSNLTHLNLSHATKLAELPDSIGNL 131

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD-NQLESLPASISNLK------------ 218
            KL  L+L    +T +P++ G+L +L+ L LS  +QL+ +P +I +LK            
Sbjct: 132 SKLTYLNLSAGVITTLPESIGNLDRLKHLNLSWCSQLQQIPTAIGSLKNLTHIQLWGSGQ 191

Query: 219 --------------MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
                          L  L ++++ + T+P  I  L     KL  L L +N+L +LP  I
Sbjct: 192 SSIFKTIEQLGAQSNLTHLYINSSSIVTIPESIGNL----SKLTHLDLSHNRLNSLPESI 247

Query: 265 ITLKCLSELSLRDN-----PLVIRFVSDMTY 290
             LK L  L+L+ N     P+ I  + ++TY
Sbjct: 248 GLLKNLVWLNLKCNNIAILPISIEHLVNLTY 278



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 83/264 (31%), Positives = 111/264 (42%), Gaps = 52/264 (19%)

Query: 63  LYHNNLSF--FPDNASKFTNLRSLDLSNNRITHLPQAIT---NFPLSTLIARNNLLTAES 117
           LY N+ S    P++    + L  LDLS+NR+  LP++I    N     L   N       
Sbjct: 210 LYINSSSIVTIPESIGNLSKLTHLDLSHNRLNSLPESIGLLKNLVWLNLKCNN----IAI 265

Query: 118 LPKDMSNLKNLKVFNLSGNQL-------------------EQFPIQIL-----DIPTLKY 153
           LP  + +L NL   NL  N+L                       + IL     ++  L  
Sbjct: 266 LPISIEHLVNLTYLNLYSNKLLRNRSESIGKLINLNYLNLSNNKVDILFDGIGNLKMLNE 325

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           L+LGNN L  +P  I KL KL  L L  N + D+   FG+L  L  L L+ N +  LP  
Sbjct: 326 LHLGNNCLTSLPENIGKLTKLSCLQLINNKIVDLTKNFGNLVNLRKLNLNGNNINRLPDD 385

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHN 254
           I NLK LK L L  N L  LP  I  L  LS                     ++ L L+ 
Sbjct: 386 IGNLKKLKELYLWKNNLEKLPDSIGNLTSLSILDLGRNQISELPDTIGNLHNIEKLDLYK 445

Query: 255 NKLRTLPTEIITLKCLSELSLRDN 278
           N+L  LP  I  L+ +S L L+ N
Sbjct: 446 NRLTCLPETISNLQSISHLYLQRN 469



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/196 (33%), Positives = 99/196 (50%), Gaps = 10/196 (5%)

Query: 46  LPNNDYNKKPENIDTL------LLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L  N+ N+ P++I  L       L+ NNL   PD+    T+L  LDL  N+I+ LP  I 
Sbjct: 374 LNGNNINRLPDDIGNLKKLKELYLWKNNLEKLPDSIGNLTSLSILDLGRNQISELPDTIG 433

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
           N   +  L    N LT   LP+ +SNL+++    L  N ++  P  + ++  LK L + N
Sbjct: 434 NLHNIEKLDLYKNRLTC--LPETISNLQSISHLYLQRNYIKLLPEGMGNLTNLKKLKIWN 491

Query: 159 NSLNHVPREINKLCK-LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           N L  +P  I  L   L  L +  N L  +P++ G+L  L +L  ++N L  +P +I N+
Sbjct: 492 NRLRCLPESIGNLAANLQSLKIRNNRLRCLPESIGNLVNLNSLDCTNNLLTDIPKNIGNI 551

Query: 218 KMLKSLLLHNNKLRTL 233
             LK+L L  N L  L
Sbjct: 552 TNLKTLNLTKNPLTDL 567



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 64/189 (33%), Positives = 94/189 (49%), Gaps = 11/189 (5%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L  N+  K P++I  L       L  N +S  PD      N+  LDL  NR+T LP+ I+
Sbjct: 397 LWKNNLEKLPDSIGNLTSLSILDLGRNQISELPDTIGNLHNIEKLDLYKNRLTCLPETIS 456

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPT-LKYLYLG 157
           N   +S L  + N +  + LP+ M NL NLK   +  N+L   P  I ++   L+ L + 
Sbjct: 457 NLQSISHLYLQRNYI--KLLPEGMGNLTNLKKLKIWNNRLRCLPESIGNLAANLQSLKIR 514

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           NN L  +P  I  L  L+ L    N LTDIP   G++  L+ L L+ N L  L   +S L
Sbjct: 515 NNRLRCLPESIGNLVNLNSLDCTNNLLTDIPKNIGNITNLKTLNLTKNPLTDL-TDLSVL 573

Query: 218 KMLKSLLLH 226
           + + +L +H
Sbjct: 574 QTIPNLTVH 582



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 74/237 (31%), Positives = 109/237 (45%), Gaps = 14/237 (5%)

Query: 55  PENIDTL----LLYHNN--LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIA 108
           PE+I  L     LY  N  ++  P++    +NL+ LDL+ N I  LP +I +    T + 
Sbjct: 55  PESIGNLSKLTRLYVRNTKIARLPESIGNLSNLKELDLTWNLIEILPTSIGDLSNLTHLN 114

Query: 109 RNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS-LNHVPRE 167
            ++      LP  + NL  L   NLS   +   P  I ++  LK+L L   S L  +P  
Sbjct: 115 LSHATKLAELPDSIGNLSKLTYLNLSAGVITTLPESIGNLDRLKHLNLSWCSQLQQIPTA 174

Query: 168 INKLCKLHVLSLGGNSLTDIPDT---FGDLYQLEALILSDNQLESLPASISNLKMLKSLL 224
           I  L  L  + L G+  + I  T    G    L  L ++ + + ++P SI NL  L  L 
Sbjct: 175 IGSLKNLTHIQLWGSGQSSIFKTIEQLGAQSNLTHLYINSSSIVTIPESIGNLSKLTHLD 234

Query: 225 LHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L +N+L +LP  I  LK     L  L L  N +  LP  I  L  L+ L+L  N L+
Sbjct: 235 LSHNRLNSLPESIGLLK----NLVWLNLKCNNIAILPISIEHLVNLTYLNLYSNKLL 287



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 75/245 (30%), Positives = 107/245 (43%), Gaps = 39/245 (15%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKN 127
           L+  PD+    + L  L+LS   IT LP++I N      +  +     + +P  + +LKN
Sbjct: 121 LAELPDSIGNLSKLTYLNLSAGVITTLPESIGNLDRLKHLNLSWCSQLQQIPTAIGSLKN 180

Query: 128 LKVFNLSGN-------QLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
           L    L G+        +EQ   Q      L +LY+ ++S+  +P  I  L KL  L L 
Sbjct: 181 LTHIQLWGSGQSSIFKTIEQLGAQ----SNLTHLYINSSSIVTIPESIGNLSKLTHLDLS 236

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII-- 238
            N L  +P++ G L  L  L L  N +  LP SI +L  L  L L++NKL    +E I  
Sbjct: 237 HNRLNSLPESIGLLKNLVWLNLKCNNIAILPISIEHLVNLTYLNLYSNKLLRNRSESIGK 296

Query: 239 ----------------------TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
                                  LK L+E    L L NN L +LP  I  L  LS L L 
Sbjct: 297 LINLNYLNLSNNKVDILFDGIGNLKMLNE----LHLGNNCLTSLPENIGKLTKLSCLQLI 352

Query: 277 DNPLV 281
           +N +V
Sbjct: 353 NNKIV 357


>gi|365922508|ref|ZP_09446706.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
 gi|364573058|gb|EHM50578.1| leucine Rich repeat-containing domain protein [Cardiobacterium
           valvarum F0432]
          Length = 429

 Score =  107 bits (266), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 91/261 (34%), Positives = 135/261 (51%), Gaps = 20/261 (7%)

Query: 24  IKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRS 83
           +K LD  ++         ++E LPN+  N     +  L   +N L+  P+  + FT +  
Sbjct: 99  LKRLDLKWN---------RLEALPNSLKNLT--RLSKLEFGYNQLTRLPETLAGFTQITE 147

Query: 84  LDLSNNRITHLPQAITNFP-LSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           LD+ +NR+T +P  ++NF  L+ L +ARN L   E LP  +  L +L   NLS N L+Q 
Sbjct: 148 LDIGDNRLTRVPHYLSNFTNLTKLNLARNQL---EELPAFLGKLTHLTHLNLSANPLKQL 204

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P  I ++  L  L L  N L  +P  ++ L +L+ L +GGN LT +P++ G L  L  L 
Sbjct: 205 PDFIGELTNLTELELYGNQLGTLPDSLSNLHQLYHLDIGGNLLTTLPESIGALENLSVLD 264

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
             +N+L SLP SI NL+ L  L L +NKL  LP +   L     +L +L L  N L TLP
Sbjct: 265 AHNNRLTSLPESIGNLQRLSCLSLAHNKLTRLPEQTSHLL----RLSTLDLSYNNLMTLP 320

Query: 262 TEIITLKCLSELSLRDNPLVI 282
             +     L+ L L  N L +
Sbjct: 321 DFVCNFSRLTNLHLAHNELTM 341



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 92/279 (32%), Positives = 125/279 (44%), Gaps = 30/279 (10%)

Query: 10  SSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLL------L 63
             D    D+ +   +  LD S+  L S                  P+NI  L+      L
Sbjct: 39  GEDRIPRDASELAGLGRLDLSFRRLQS-----------------LPDNIGDLIHLTELDL 81

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDM 122
             N L   P++    T L+ LDL  NR+  LP ++ N   LS L    N LT   LP+ +
Sbjct: 82  RGNELETLPESIGNLTLLKRLDLKWNRLEALPNSLKNLTRLSKLEFGYNQLT--RLPETL 139

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
           +    +   ++  N+L + P  + +   L  L L  N L  +P  + KL  L  L+L  N
Sbjct: 140 AGFTQITELDIGDNRLTRVPHYLSNFTNLTKLNLARNQLEELPAFLGKLTHLTHLNLSAN 199

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            L  +PD  G+L  L  L L  NQL +LP S+SNL  L  L +  N L TLP  I  L  
Sbjct: 200 PLKQLPDFIGELTNLTELELYGNQLGTLPDSLSNLHQLYHLDIGGNLLTTLPESIGAL-- 257

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             E L  L  HNN+L +LP  I  L+ LS LSL  N L 
Sbjct: 258 --ENLSVLDAHNNRLTSLPESIGNLQRLSCLSLAHNKLT 294



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 119/237 (50%), Gaps = 9/237 (3%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           Q+E LP   +  K  ++  L L  N L   PD   + TNL  L+L  N++  LP +++N 
Sbjct: 177 QLEELP--AFLGKLTHLTHLNLSANPLKQLPDFIGELTNLTELELYGNQLGTLPDSLSNL 234

Query: 102 -PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
             L  L    NLLT  +LP+ +  L+NL V +   N+L   P  I ++  L  L L +N 
Sbjct: 235 HQLYHLDIGGNLLT--TLPESIGALENLSVLDAHNNRLTSLPESIGNLQRLSCLSLAHNK 292

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P + + L +L  L L  N+L  +PD   +  +L  L L+ N+L  LP  I  L  L
Sbjct: 293 LTRLPEQTSHLLRLSTLDLSYNNLMTLPDFVCNFSRLTNLHLAHNELTMLPMHIGYLGEL 352

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRD 277
           + L + NN L +LP  +  L    +KL +L L  N++  LP  I  L  L  L +R+
Sbjct: 353 EILDVSNNDLGSLPDSVAKL----DKLTTLNLSGNQIPFLPKFIANLTHLCILDVRN 405



 Score = 66.2 bits (160), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 49/130 (37%), Positives = 70/130 (53%), Gaps = 6/130 (4%)

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
           + +PR+ ++L  L  L L    L  +PD  GDL  L  L L  N+LE+LP SI NL +LK
Sbjct: 41  DRIPRDASELAGLGRLDLSFRRLQSLPDNIGDLIHLTELDLRGNELETLPESIGNLTLLK 100

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL- 280
            L L  N+L  LP    +LK L+ +L  L    N+L  LP  +     ++EL + DN L 
Sbjct: 101 RLDLKWNRLEALPN---SLKNLT-RLSKLEFGYNQLTRLPETLAGFTQITELDIGDNRLT 156

Query: 281 -VIRFVSDMT 289
            V  ++S+ T
Sbjct: 157 RVPHYLSNFT 166


>gi|418672956|ref|ZP_13234286.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|410580063|gb|EKQ47894.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 266

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 100/164 (60%), Gaps = 4/164 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK +  LKNL++ +L  NQ +  P +I  +  L+ L L  N    VP++I +L  L V
Sbjct: 88  TLPKKIEQLKNLQMLDLCYNQFKTVPKKIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQV 147

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+L  N LT +P   G L  L+ L L  N+L++LP  I  LK L++L L+ N+L TLP E
Sbjct: 148 LNLSSNQLTTLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPRE 207

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L+ L+E    L L +N++ TLP EII L+ L +L+L +NP+
Sbjct: 208 IGRLQSLTE----LHLQHNQIATLPDEIIQLQNLRKLTLYENPI 247



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 28/199 (14%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           ++  L+L    L+  P    +  NL+ LDL  N+                         +
Sbjct: 75  DVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQF------------------------K 110

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++PK +  LKNL++ +L  NQ +  P +I  +  L+ L L +N L  +P+EI KL  L V
Sbjct: 111 TVPKKIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQV 170

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+LG N L  +P     L  L+ L L+ NQL +LP  I  L+ L  L L +N++ TLP E
Sbjct: 171 LNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPREIGRLQSLTELHLQHNQIATLPDE 230

Query: 237 IITLKCLSEKLKSLLLHNN 255
           II L    + L+ L L+ N
Sbjct: 231 IIQL----QNLRKLTLYEN 245



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 91/168 (54%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L + + N  ++++  LS  +L   P +I  +  L+ L L  N    VP++I +L  
Sbjct: 62  TYRDLTEALQNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKKIEQLKN 121

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N    +P   G L  L+ L LS NQL +LP  I  L+ L+ L L +N+L+TL
Sbjct: 122 LQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLGSNRLKTL 181

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P  I  LK     L++L L+ N+L TLP EI  L+ L+EL L+ N + 
Sbjct: 182 PKGIEQLK----NLQTLYLNYNQLTTLPREIGRLQSLTELHLQHNQIA 225



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 81/173 (46%), Gaps = 24/173 (13%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           +N+  L L +N     P    +  NL+ LDL  N+                         
Sbjct: 97  KNLQMLDLCYNQFKTVPKKIEQLKNLQMLDLCYNQF------------------------ 132

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           +++PK +  LKNL+V NLS NQL   P +I  +  L+ L LG+N L  +P+ I +L  L 
Sbjct: 133 KTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQ 192

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
            L L  N LT +P   G L  L  L L  NQ+ +LP  I  L+ L+ L L+ N
Sbjct: 193 TLYLNYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYEN 245



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 21/167 (12%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPN--------NDYNKKPE------NIDTLLLYHNNL 68
           +++ LD  Y+    +T+  +IE L N        N +   P+      N+  L L  N L
Sbjct: 98  NLQMLDLCYNQF--KTVPKKIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQL 155

Query: 69  SFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKN 127
           +  P    K  NL+ L+L +NR+  LP+ I     L TL    N LT  +LP+++  L++
Sbjct: 156 TTLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLT--TLPREIGRLQS 213

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           L   +L  NQ+   P +I+ +  L+ L L  N +   P+E++K+ KL
Sbjct: 214 LTELHLQHNQIATLPDEIIQLQNLRKLTLYENPIP--PQELDKIRKL 258


>gi|405966144|gb|EKC31462.1| hypothetical protein CGI_10021564 [Crassostrea gigas]
          Length = 717

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/318 (30%), Positives = 152/318 (47%), Gaps = 40/318 (12%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAES 117
           ++ LLL  N   F P        L+ L +S NR+T +   I      T+I  NN L  E 
Sbjct: 249 LEELLLDDNEFEFIPVQVFWMETLQMLTMSGNRLTSIQPDIGRLTQLTVIGLNNNLI-EE 307

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           +P++   L+ L+V  L  N+++  P  I ++  L+ LYLG NS+ HVP  +     L VL
Sbjct: 308 IPEEFFQLEALEVVGLENNKIKAIPDNIANLYELRELYLGRNSIEHVPENLCWCSNLEVL 367

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
           SL  NS++ +P    +L ++  LILS+N+ E LP +I  ++ L+      NKL  +P + 
Sbjct: 368 SLLNNSISVLPVEVENLRRIHTLILSNNKFEFLPEAIGLIRDLEIFFADGNKLSYVPVDF 427

Query: 238 ITLK-------------------CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            TLK                   C  + ++SL L  N++ ++P EI  L  LS L L +N
Sbjct: 428 GTLKRLRQIDLSSNKFSIFPLPICNLKTVESLKLSKNEIESIPAEIANLDRLSSLYLNNN 487

Query: 279 PLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQ---EHLPQNLVQY-----LESAHHCV 330
            +        T+ P    EL S  +++H +D+S    E +P  + Q      L+ +H+  
Sbjct: 488 KI-------HTFAP----ELCS-LIQLHILDFSNNYVEDIPDAISQMENLTDLDLSHNRF 535

Query: 331 NPKCKGVFFDNRIEHIKF 348
               K V    R+E +KF
Sbjct: 536 LEFPKTVVGIPRLERLKF 553



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/197 (38%), Positives = 106/197 (53%), Gaps = 7/197 (3%)

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           ++DL  +R+   PQAI +   ++ L   NN LT   +PK++SNL NL+  +LS N+L   
Sbjct: 67  TVDLRGHRLKECPQAILSMENITYLCLSNNKLT--EIPKEISNLCNLQELDLSHNKLSTL 124

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
              I  +  L +L + NN ++ +  EI+ L  L  L +  N LT +P    DL ++  L+
Sbjct: 125 TRGIYLLTELTFLDVSNNEVSEILSEISGLEHLRELVVSDNRLTAVPPQIRDLLEITHLV 184

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           L+DNQ+  LP SI  L  L+ L L  N L  L  E+    C  E+LK L L  N LR LP
Sbjct: 185 LNDNQITVLPDSIGELTTLQVLGLERNALEFLNPEV----CKIEQLKRLGLSGNSLRNLP 240

Query: 262 TEIITLKCLSELSLRDN 278
            EI    CL EL L DN
Sbjct: 241 REIENFSCLEELLLDDN 257



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 70/237 (29%), Positives = 118/237 (49%), Gaps = 12/237 (5%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHL-PQAITNFPLSTLIARNNLLTAE 116
           I  L+L  N ++  PD+  + T L+ L L  N +  L P+      L  L    N L   
Sbjct: 180 ITHLVLNDNQITVLPDSIGELTTLQVLGLERNALEFLNPEVCKIEQLKRLGLSGNSL--R 237

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LP+++ N   L+   L  N+ E  P+Q+  + TL+ L +  N L  +  +I +L +L V
Sbjct: 238 NLPREIENFSCLEELLLDDNEFEFIPVQVFWMETLQMLTMSGNRLTSIQPDIGRLTQLTV 297

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           + L  N + +IP+ F  L  LE + L +N+++++P +I+NL  L+ L L  N +  +P  
Sbjct: 298 IGLNNNLIEEIPEEFFQLEALEVVGLENNKIKAIPDNIANLYELRELYLGRNSIEHVPEN 357

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN-----PLVIRFVSDM 288
           +    C    L+ L L NN +  LP E+  L+ +  L L +N     P  I  + D+
Sbjct: 358 L----CWCSNLEVLSLLNNSISVLPVEVENLRRIHTLILSNNKFEFLPEAIGLIRDL 410



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 84/283 (29%), Positives = 136/283 (48%), Gaps = 29/283 (10%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           ENI  L L +N L+  P   S   NL+ LDLS+N+++ L + I      T +  +N   +
Sbjct: 86  ENITYLCLSNNKLTEIPKEISNLCNLQELDLSHNKLSTLTRGIYLLTELTFLDVSNNEVS 145

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           E L  ++S L++L+   +S N+L   P QI D+  + +L L +N +  +P  I +L  L 
Sbjct: 146 EIL-SEISGLEHLRELVVSDNRLTAVPPQIRDLLEITHLVLNDNQITVLPDSIGELTTLQ 204

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           VL L  N+L  +      + QL+ L LS N L +LP  I N   L+ LLL +N+   +P 
Sbjct: 205 VLGLERNALEFLNPEVCKIEQLKRLGLSGNSLRNLPREIENFSCLEELLLDDNEFEFIPV 264

Query: 236 EIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           ++  ++ L                     +L  + L+NN +  +P E   L+ L  + L 
Sbjct: 265 QVFWMETLQMLTMSGNRLTSIQPDIGRLTQLTVIGLNNNLIEEIPEEFFQLEALEVVGLE 324

Query: 277 DNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNL 319
           +N   I+ + D      +L EL    L  + I    EH+P+NL
Sbjct: 325 NNK--IKAIPDNI---ANLYELRELYLGRNSI----EHVPENL 358



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 110/235 (46%), Gaps = 26/235 (11%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N++ L L +N++S  P        + +L LSNN+   LP+AI     L    A  N L+ 
Sbjct: 363 NLEVLSLLNNSISVLPVEVENLRRIHTLILSNNKFEFLPEAIGLIRDLEIFFADGNKLSY 422

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P D   LK L+  +LS N+   FP+ I ++ T++ L L  N +  +P EI  L +L 
Sbjct: 423 --VPVDFGTLKRLRQIDLSSNKFSIFPLPICNLKTVESLKLSKNEIESIPAEIANLDRLS 480

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N +         L QL  L  S+N +E +P +IS ++ L  L L +N+    P 
Sbjct: 481 SLYLNNNKIHTFAPELCSLIQLHILDFSNNYVEDIPDAISQMENLTDLDLSHNRFLEFPK 540

Query: 236 EIITLKCLSEKLK----------------------SLLLHNNKLRTLPTEIITLK 268
            ++ +  L E+LK                       L++ NN LRTLP+ +  +K
Sbjct: 541 TVVGIPRL-ERLKFDQAEGHPVPGLPDEIEFSNVSYLIVSNNTLRTLPSTMSGMK 594



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 28/206 (13%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRI-THLPQAITNFPLSTLIARNNLLTAE 116
           +++L L  N +   P   +    L SL L+NN+I T  P+  +   L  L   NN +  E
Sbjct: 456 VESLKLSKNEIESIPAEIANLDRLSSLYLNNNKIHTFAPELCSLIQLHILDFSNNYV--E 513

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK------------------------ 152
            +P  +S ++NL   +LS N+  +FP  ++ IP L+                        
Sbjct: 514 DIPDAISQMENLTDLDLSHNRFLEFPKTVVGIPRLERLKFDQAEGHPVPGLPDEIEFSNV 573

Query: 153 -YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
            YL + NN+L  +P  ++ +  +  +    N + ++PD+F  L +L+ L L+DN+L SLP
Sbjct: 574 SYLIVSNNTLRTLPSTMSGMKNIISIIADHNEIGELPDSFCRLRRLQVLHLNDNKLSSLP 633

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEI 237
            +  +L+ LK L LHNN LRT P ++
Sbjct: 634 ENFDHLRNLKDLRLHNNPLRTPPMDV 659


>gi|148233354|ref|NP_001086369.1| leucine rich repeat containing 1 [Xenopus laevis]
 gi|49523200|gb|AAH75175.1| Scrp1 protein [Xenopus laevis]
 gi|83642783|dbj|BAE54373.1| scribble-related protein 1 [Xenopus laevis]
          Length = 524

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 122/223 (54%), Gaps = 9/223 (4%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-F 101
           +++LP N  N    N+ +L L  N L+F P++ ++   L  LD+ NN + +LP+ I + +
Sbjct: 140 LQVLPENIGNLS--NLVSLELRENLLTFLPESLAQLHRLEELDVGNNELYNLPETIGSLY 197

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L  L    N L    LP ++ NLKNL   +LS N+LE+ P +I  + +L  L + +NS+
Sbjct: 198 KLKDLWLDGNQLA--DLPPEIGNLKNLLCLDLSENKLERLPEEISGLKSLTDLLVSHNSI 255

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +P  I KL  L +L +  N L  + D  G+   L  LIL++NQL  LP SI  LK L 
Sbjct: 256 EVLPDGIGKLKNLSILKVDQNRLMQLTDCIGECESLTELILTENQLLVLPRSIGKLKKLC 315

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           +L +  NKL +LP EI    C S  L    +  N+L  +P+EI
Sbjct: 316 NLNIDRNKLMSLPKEIGG--CCS--LNVFCVRENRLSRIPSEI 354



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/227 (37%), Positives = 119/227 (52%), Gaps = 9/227 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTA 115
           ++ LLL  N L   P    +   LR L LS+N I  LP  I NF  L  L ++RN +   
Sbjct: 38  LEELLLDANQLRELPKQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEI--- 94

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+ +S  K L+V + SGN L + P    D+ +L  L + + SL  +P  I  L  L 
Sbjct: 95  PEIPESISFCKALQVADFSGNPLTRLPDSFPDLASLTCLSINDISLQVLPENIGNLSNLV 154

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +P++   L++LE L + +N+L +LP +I +L  LK L L  N+L  LP 
Sbjct: 155 SLELRENLLTFLPESLAQLHRLEELDVGNNELYNLPETIGSLYKLKDLWLDGNQLADLPP 214

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           EI  LK     L  L L  NKL  LP EI  LK L++L +  N + +
Sbjct: 215 EIGNLK----NLLCLDLSENKLERLPEEISGLKSLTDLLVSHNSIEV 257



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 124/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N +   P++ S    L+  D S N +T LP +  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPDSFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
           +    T ++ N++ + + LP+++ NL NL    L  N L   P  +  +  L+ L +GNN
Sbjct: 126 DLASLTCLSINDI-SLQVLPENIGNLSNLVSLELRENLLTFLPESLAQLHRLEELDVGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L ++P  I  L KL  L L GN L D+P   G+L  L  L LS+N+LE LP  IS LK 
Sbjct: 185 ELYNLPETIGSLYKLKDLWLDGNQLADLPPEIGNLKNLLCLDLSENKLERLPEEISGLKS 244

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTL 260
           L  LL+ +N +  LP  I  LK LS                   E L  L+L  N+L  L
Sbjct: 245 LTDLLVSHNSIEVLPDGIGKLKNLSILKVDQNRLMQLTDCIGECESLTELILTENQLLVL 304

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK L  L++  N L+
Sbjct: 305 PRSIGKLKKLCNLNIDRNKLM 325



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 100/221 (45%), Gaps = 23/221 (10%)

Query: 81  LRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           + S+D  +  +  +P+ I  +   L  L+   N L    LPK    L  L+   LS N++
Sbjct: 14  VESVDKRHRSLLAVPEEIYRYSRSLEELLLDANQL--RELPKQFFQLVKLRKLGLSDNEI 71

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
           ++ P +I +   L  L +  N +  +P  I+    L V    GN LT +PD+F DL  L 
Sbjct: 72  QRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPDSFPDLASLT 131

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE------------- 245
            L ++D  L+ LP +I NL  L SL L  N L  LP  +  L  L E             
Sbjct: 132 CLSINDISLQVLPENIGNLSNLVSLELRENLLTFLPESLAQLHRLEELDVGNNELYNLPE 191

Query: 246 ------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
                 KLK L L  N+L  LP EI  LK L  L L +N L
Sbjct: 192 TIGSLYKLKDLWLDGNQLADLPPEIGNLKNLLCLDLSENKL 232


>gi|418727836|ref|ZP_13286423.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
 gi|409958898|gb|EKO22676.1| leucine rich repeat protein [Leptospira interrogans str. UI 12621]
          Length = 241

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/225 (38%), Positives = 119/225 (52%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L +N L        +  NL+ L+L+NN++  LP+ I     L TL   NN L  
Sbjct: 3   NLQALELNNNQLKTLSKEIGQLKNLQRLELNNNQLMTLPEEIGQLKNLQTLNLWNNQLM- 61

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +L K++  LKNL+   L+ NQL   P +I  +  L+ L L NN L  + +EI +L  L 
Sbjct: 62  -TLSKEIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLQ 120

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L LG N    IP+    L  L+ L L++NQL +L   I  L+ L+ L L  N+  TLP 
Sbjct: 121 RLDLGYNQFKIIPNEIEQLQNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQFTTLPE 180

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI  LK     L+ L L+NN+L+TL  EI  LK L  L L +N L
Sbjct: 181 EIGQLK----NLQVLELNNNQLKTLSKEIGQLKNLQRLELDNNQL 221



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 79/210 (37%), Positives = 109/210 (51%), Gaps = 7/210 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L +N L   P+   +  NL++L+L NN++  L + I     L  L    N LT 
Sbjct: 26  NLQRLELNNNQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKEIGQLKNLQELYLNYNQLTI 85

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP ++  LKNL+   L+ NQL+    +I  +  L+ L LG N    +P EI +L  L 
Sbjct: 86  --LPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLQRLDLGYNQFKIIPNEIEQLQNLQ 143

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           VL L  N LT +    G L  L+ L LS NQ  +LP  I  LK L+ L L+NN+L+TL  
Sbjct: 144 VLELNNNQLTTLSKEIGRLQNLQELYLSYNQFTTLPEEIGQLKNLQVLELNNNQLKTLSK 203

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
           EI  LK     L+ L L NN+L +   E I
Sbjct: 204 EIGQLK----NLQRLELDNNQLSSEEKERI 229



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 71/189 (37%), Positives = 100/189 (52%), Gaps = 4/189 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +L K++  LKNL+   L+ NQL   P +I  +  L+ L L NN L  + +EI +L  L  
Sbjct: 16  TLSKEIGQLKNLQRLELNNNQLMTLPEEIGQLKNLQTLNLWNNQLMTLSKEIGQLKNLQE 75

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N LT +P+  G L  L+AL L++NQL++L   I  LK L+ L L  N+ + +P E
Sbjct: 76  LYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLKNLQRLDLGYNQFKIIPNE 135

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
           I  L    + L+ L L+NN+L TL  EI  L+ L EL L  N            K   +L
Sbjct: 136 IEQL----QNLQVLELNNNQLTTLSKEIGRLQNLQELYLSYNQFTTLPEEIGQLKNLQVL 191

Query: 297 ELASRTLKV 305
           EL +  LK 
Sbjct: 192 ELNNNQLKT 200



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/157 (38%), Positives = 85/157 (54%), Gaps = 4/157 (2%)

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           +KNL+   L+ NQL+    +I  +  L+ L L NN L  +P EI +L  L  L+L  N L
Sbjct: 1   MKNLQALELNNNQLKTLSKEIGQLKNLQRLELNNNQLMTLPEEIGQLKNLQTLNLWNNQL 60

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
             +    G L  L+ L L+ NQL  LP  I  LK L++L L+NN+L+TL  EI  LK   
Sbjct: 61  MTLSKEIGQLKNLQELYLNYNQLTILPNEIGQLKNLQALELNNNQLKTLSKEIGQLK--- 117

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             L+ L L  N+ + +P EI  L+ L  L L +N L 
Sbjct: 118 -NLQRLDLGYNQFKIIPNEIEQLQNLQVLELNNNQLT 153


>gi|359683238|ref|ZP_09253239.1| hypothetical protein Lsan2_00495 [Leptospira santarosai str.
           2000030832]
          Length = 245

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 69/166 (41%), Positives = 97/166 (58%), Gaps = 4/166 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           + PK++  L+NL+V +LS  QL   P ++ ++  L+ L L  N L  +P+EI  L  L  
Sbjct: 63  TFPKEIGQLQNLQVLSLSYGQLTIIPKEVGNLKNLQTLDLAENQLKTLPKEIGNLQNLQW 122

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L LG N LT +P+  G L  L+ L L +NQL++LP  I NL+ L+ L L  N+L TLP E
Sbjct: 123 LDLGYNQLTTLPEEIGKLQNLQELHLYENQLKTLPKEIGNLQNLQWLDLGYNQLTTLPEE 182

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           I  L+ L E    L L+ N+L  LP EI+ LK L  L +  NP +I
Sbjct: 183 IGKLQNLQE----LHLYENQLTKLPNEIVNLKNLQTLDVSGNPALI 224



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 68/192 (35%), Positives = 98/192 (51%), Gaps = 24/192 (12%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNL 112
           + P ++  L L HN L+ FP    +  NL+ L LS  ++T                    
Sbjct: 46  QNPTDVRVLSLVHNQLTTFPKEIGQLQNLQVLSLSYGQLT-------------------- 85

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
                +PK++ NLKNL+  +L+ NQL+  P +I ++  L++L LG N L  +P EI KL 
Sbjct: 86  ----IIPKEVGNLKNLQTLDLAENQLKTLPKEIGNLQNLQWLDLGYNQLTTLPEEIGKLQ 141

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N L  +P   G+L  L+ L L  NQL +LP  I  L+ L+ L L+ N+L  
Sbjct: 142 NLQELHLYENQLKTLPKEIGNLQNLQWLDLGYNQLTTLPEEIGKLQNLQELHLYENQLTK 201

Query: 233 LPTEIITLKCLS 244
           LP EI+ LK L 
Sbjct: 202 LPNEIVNLKNLQ 213


>gi|17227620|ref|NP_484168.1| hypothetical protein alr0124 [Nostoc sp. PCC 7120]
 gi|17135102|dbj|BAB77648.1| leucine-rich-repeat protein [Nostoc sp. PCC 7120]
          Length = 1119

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/240 (32%), Positives = 127/240 (52%), Gaps = 12/240 (5%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           +++ L+L    L+  P+  +K TNL  L LS+N+IT +P+A+     L+ L    N +T 
Sbjct: 104 HLEELILIRVQLTEIPEALAKLTNLTQLILSDNQITEIPEALAKLTNLTQLNLSYNQIT- 162

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+ ++ L NL   NLS NQ+ + P  +  +  L  L L  N    +P  + KL  L 
Sbjct: 163 -EIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLRGNQRTEIPEALAKLTNLT 221

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L+L  N  T+IP+    L  L  LILSDNQ++ +P +I+ L  L  L+L  N+++ +P 
Sbjct: 222 RLNLSYNQRTEIPEALAKLTNLTQLILSDNQIKEIPETIAKLTNLTHLILSGNQIKEIPE 281

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN-----PLVIRFVSDMTY 290
            I  L  L++    L L  N+++ +P  I  L  L++L L  N     P  I  ++++T+
Sbjct: 282 TIAKLTNLTQ----LGLDGNQIKEIPEAIAKLTNLTQLGLDGNQIKEIPEAITKLTNLTH 337



 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/253 (32%), Positives = 130/253 (51%), Gaps = 9/253 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L+L  N ++  P+  +K TNL  L+LS N+IT +P+A+     L+ L    N +T 
Sbjct: 127 NLTQLILSDNQITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLSYNQIT- 185

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+ ++ L NL   NL GNQ  + P  +  +  L  L L  N    +P  + KL  L 
Sbjct: 186 -EIPEALAKLTNLTQLNLRGNQRTEIPEALAKLTNLTRLNLSYNQRTEIPEALAKLTNLT 244

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N + +IP+T   L  L  LILS NQ++ +P +I+ L  L  L L  N+++ +P 
Sbjct: 245 QLILSDNQIKEIPETIAKLTNLTHLILSGNQIKEIPETIAKLTNLTQLGLDGNQIKEIPE 304

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
            I  L  L++    L L  N+++ +P  I  L  L+ L L  N   I+ + +   K  +L
Sbjct: 305 AIAKLTNLTQ----LGLDGNQIKEIPEAITKLTNLTHLILSGNQ--IKEIPETIAKLTNL 358

Query: 296 LELASRTLKVHEI 308
            +LA  + ++ EI
Sbjct: 359 TQLALSSNQITEI 371



 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 74/223 (33%), Positives = 118/223 (52%), Gaps = 7/223 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L  N  +  P+  +K TNL  L+LS N+ T +P+A+     L+ LI  +N +  
Sbjct: 196 NLTQLNLRGNQRTEIPEALAKLTNLTRLNLSYNQRTEIPEALAKLTNLTQLILSDNQI-- 253

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           + +P+ ++ L NL    LSGNQ+++ P  I  +  L  L L  N +  +P  I KL  L 
Sbjct: 254 KEIPETIAKLTNLTHLILSGNQIKEIPETIAKLTNLTQLGLDGNQIKEIPEAIAKLTNLT 313

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L GN + +IP+    L  L  LILS NQ++ +P +I+ L  L  L L +N++  +P 
Sbjct: 314 QLGLDGNQIKEIPEAITKLTNLTHLILSGNQIKEIPETIAKLTNLTQLALSSNQITEIPE 373

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            +  L  L++    L L +N++  +P  +  L  L+ L LR N
Sbjct: 374 VLAQLTNLTQ----LFLSSNQITQIPEALAPLTNLTTLHLRVN 412



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 71/224 (31%), Positives = 110/224 (49%), Gaps = 16/224 (7%)

Query: 48  NNDYNKKPE---------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI 98
           N  YN++ E         N+  L+L  N +   P+  +K TNL  L LS N+I  +P+ I
Sbjct: 224 NLSYNQRTEIPEALAKLTNLTQLILSDNQIKEIPETIAKLTNLTHLILSGNQIKEIPETI 283

Query: 99  TNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
                L+ L    N +  + +P+ ++ L NL    L GNQ+++ P  I  +  L +L L 
Sbjct: 284 AKLTNLTQLGLDGNQI--KEIPEAIAKLTNLTQLGLDGNQIKEIPEAITKLTNLTHLILS 341

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
            N +  +P  I KL  L  L+L  N +T+IP+    L  L  L LS NQ+  +P +++ L
Sbjct: 342 GNQIKEIPETIAKLTNLTQLALSSNQITEIPEVLAQLTNLTQLFLSSNQITQIPEALAPL 401

Query: 218 KMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
             L +L L  N++  +P  I +L     KL+ L L  N L   P
Sbjct: 402 TNLTTLHLRVNQITQIPEAIESLP----KLELLDLRGNPLPISP 441



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/253 (29%), Positives = 126/253 (49%), Gaps = 9/253 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L +  N L   PD   +  +L  L L   ++T +P+A+     L+ LI  +N +T 
Sbjct: 81  NLRKLDISGNPLEGIPDVVMQILHLEELILIRVQLTEIPEALAKLTNLTQLILSDNQIT- 139

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+ ++ L NL   NLS NQ+ + P  +  +  L  L L  N +  +P  + KL  L 
Sbjct: 140 -EIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLT 198

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L+L GN  T+IP+    L  L  L LS NQ   +P +++ L  L  L+L +N+++ +P 
Sbjct: 199 QLNLRGNQRTEIPEALAKLTNLTRLNLSYNQRTEIPEALAKLTNLTQLILSDNQIKEIPE 258

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
            I  L  L+     L+L  N+++ +P  I  L  L++L L  N   I+ + +   K  +L
Sbjct: 259 TIAKLTNLTH----LILSGNQIKEIPETIAKLTNLTQLGLDGNQ--IKEIPEAIAKLTNL 312

Query: 296 LELASRTLKVHEI 308
            +L     ++ EI
Sbjct: 313 TQLGLDGNQIKEI 325



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/196 (30%), Positives = 93/196 (47%), Gaps = 9/196 (4%)

Query: 45  LLPNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI 98
           +L  N   + PE      N+  L L  N +   P+  +K TNL  L L  N+I  +P+AI
Sbjct: 270 ILSGNQIKEIPETIAKLTNLTQLGLDGNQIKEIPEAIAKLTNLTQLGLDGNQIKEIPEAI 329

Query: 99  TNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           T    L+ LI   N +  + +P+ ++ L NL    LS NQ+ + P  +  +  L  L+L 
Sbjct: 330 TKLTNLTHLILSGNQI--KEIPETIAKLTNLTQLALSSNQITEIPEVLAQLTNLTQLFLS 387

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           +N +  +P  +  L  L  L L  N +T IP+    L +LE L L  N L   P  + ++
Sbjct: 388 SNQITQIPEALAPLTNLTTLHLRVNQITQIPEAIESLPKLELLDLRGNPLPISPEILGSV 447

Query: 218 KMLKSLLLHNNKLRTL 233
             + S+    N LR L
Sbjct: 448 YQVGSVEEIFNYLRLL 463



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 21/216 (9%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE----------------SLPKDM 122
             R LDLS   +T LP  I     L +LI    +   E                +LP ++
Sbjct: 17  GWRELDLSGQELTELPGEIGKLQQLESLILGKQVGGYEKVGYRIFQKALGNNLKTLPIEL 76

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
            +L NL+  ++SGN LE  P  ++ I  L+ L L    L  +P  + KL  L  L L  N
Sbjct: 77  LSLPNLRKLDISGNPLEGIPDVVMQILHLEELILIRVQLTEIPEALAKLTNLTQLILSDN 136

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            +T+IP+    L  L  L LS NQ+  +P +++ L  L  L L  N++  +P  +  L  
Sbjct: 137 QITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTNLTQLNLSYNQITEIPEALAKLTN 196

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           L++    L L  N+   +P  +  L  L+ L+L  N
Sbjct: 197 LTQ----LNLRGNQRTEIPEALAKLTNLTRLNLSYN 228


>gi|124003974|ref|ZP_01688821.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123990553|gb|EAY30033.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 389

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 80/228 (35%), Positives = 115/228 (50%), Gaps = 9/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLL 113
           + +  L +  N  S  P    + T L+ L L NN++  LP  I     L++L +++N L 
Sbjct: 72  QRLTQLKMEQNTWSTLPKEILQLTQLQELKLRNNQLQALPHTIHQLGCLTSLNLSKNRL- 130

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
              +LP+ + +L++L+   L GN+L   P     +  LK LYL NN L   P+E+ +L  
Sbjct: 131 --RNLPESIGHLQHLQHLWLWGNRLSALPQSFAQLTALKVLYLDNNLLTTFPQEVTQLIH 188

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L LGGN + D+    G L QL  L L+D  ++ LP  I  LK L+ L   N+KL+ L
Sbjct: 189 LEKLFLGGNDIQDLSPAIGKLVQLNTLSLADTLIKKLPDEIGKLKQLQQLNFENSKLKVL 248

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P     L  LSE    + L  N+L  LP  I  L  L EL L+ N L 
Sbjct: 249 PKTFGQLAQLSE----VFLAYNQLGALPETIGGLSKLKELHLQVNRLT 292



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 137/289 (47%), Gaps = 31/289 (10%)

Query: 20  KTVSIKTLDFSYSSLDSETLA-TQIELLP--NNDYNKKPENI------DTLLLYHNNLSF 70
           +   +K    ++S+L  E L  TQ++ L   NN     P  I       +L L  N L  
Sbjct: 73  RLTQLKMEQNTWSTLPKEILQLTQLQELKLRNNQLQALPHTIHQLGCLTSLNLSKNRLRN 132

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLK 129
            P++     +L+ L L  NR++ LPQ+      L  L   NNLLT  + P++++ L +L+
Sbjct: 133 LPESIGHLQHLQHLWLWGNRLSALPQSFAQLTALKVLYLDNNLLT--TFPQEVTQLIHLE 190

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
              L GN ++     I  +  L  L L +  +  +P EI KL +L  L+   + L  +P 
Sbjct: 191 KLFLGGNDIQDLSPAIGKLVQLNTLSLADTLIKKLPDEIGKLKQLQQLNFENSKLKVLPK 250

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS----- 244
           TFG L QL  + L+ NQL +LP +I  L  LK L L  N+L   P  I  L  L      
Sbjct: 251 TFGQLAQLSEVFLAYNQLGALPETIGGLSKLKELHLQVNRLTGFPKSIGKLNSLEVLVAD 310

Query: 245 --------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
                         + L+SL L  N+L+TLP ++  L+ L +L++ +NP
Sbjct: 311 DNQLEVLPAEINGMKNLRSLSLSGNQLKTLPIKLTQLEHLHKLNVYNNP 359



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 97/228 (42%), Gaps = 45/228 (19%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-------------- 101
           +++  L L+ N LS  P + ++ T L+ L L NN +T  PQ +T                
Sbjct: 141 QHLQHLWLWGNRLSALPQSFAQLTALKVLYLDNNLLTTFPQEVTQLIHLEKLFLGGNDIQ 200

Query: 102 ----PLSTLIARNNLLTAESL----PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKY 153
                +  L+  N L  A++L    P ++  LK L+  N   ++L+  P     +  L  
Sbjct: 201 DLSPAIGKLVQLNTLSLADTLIKKLPDEIGKLKQLQQLNFENSKLKVLPKTFGQLAQLSE 260

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI------------ 201
           ++L  N L  +P  I  L KL  L L  N LT  P + G L  LE L+            
Sbjct: 261 VFLAYNQLGALPETIGGLSKLKELHLQVNRLTGFPKSIGKLNSLEVLVADDNQLEVLPAE 320

Query: 202 -----------LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
                      LS NQL++LP  ++ L+ L  L ++NN    +  E+I
Sbjct: 321 INGMKNLRSLSLSGNQLKTLPIKLTQLEHLHKLNVYNNPFEYIVPEMI 368


>gi|260806243|ref|XP_002597994.1| hypothetical protein BRAFLDRAFT_221597 [Branchiostoma floridae]
 gi|229283264|gb|EEN54006.1| hypothetical protein BRAFLDRAFT_221597 [Branchiostoma floridae]
          Length = 343

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 86/244 (35%), Positives = 121/244 (49%), Gaps = 17/244 (6%)

Query: 46  LPNNDYNKKPENID----------TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLP 95
           L  N + K PE +           T+ L    L+  P       ++  LDLSNNR+T +P
Sbjct: 29  LEKNRFKKIPEEVYLQPKVVNGLLTIDLSGKRLTSVPAEVFDSKDVERLDLSNNRLTSIP 88

Query: 96  QAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYL 154
           + I     L  L   NNLLT   LP+ ++ L NL+  ++S N+LE  P  I  +  L  L
Sbjct: 89  EEIGQLQKLRELKLDNNLLT--QLPQAITTLPNLQHIDVSDNKLETLPDGISRL-QLHEL 145

Query: 155 YLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASI 214
           +L +N    +P E+ KL +L+   L G  LT +P    D   +E L+LS+N+L S+P  I
Sbjct: 146 FLHDNRFKEIPEEVCKLLQLNTFYLSGKGLTSVPAEVFDATDIERLVLSENRLTSIPEEI 205

Query: 215 SNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
             L+ L+ L L NN L  LP  I TL  L     S   HNN L +LP  I  L+ L  L+
Sbjct: 206 GQLQKLRELKLENNLLTELPQAITTLPNLQHIDVS---HNNGLESLPGGIGELEQLGYLN 262

Query: 275 LRDN 278
           +  N
Sbjct: 263 IAGN 266



 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 80/247 (32%), Positives = 123/247 (49%), Gaps = 26/247 (10%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-----------LS 104
           ++++ L L +N L+  P+   +   LR L L NN +T LPQAIT  P           L 
Sbjct: 72  KDVERLDLSNNRLTSIPEEIGQLQKLRELKLDNNLLTQLPQAITTLPNLQHIDVSDNKLE 131

Query: 105 TL---IARNNLLTA-------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYL 154
           TL   I+R  L          + +P+++  L  L  F LSG  L   P ++ D   ++ L
Sbjct: 132 TLPDGISRLQLHELFLHDNRFKEIPEEVCKLLQLNTFYLSGKGLTSVPAEVFDATDIERL 191

Query: 155 YLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILS-DNQLESLPAS 213
            L  N L  +P EI +L KL  L L  N LT++P     L  L+ + +S +N LESLP  
Sbjct: 192 VLSENRLTSIPEEIGQLQKLRELKLENNLLTELPQAITTLPNLQHIDVSHNNGLESLPGG 251

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           I  L+ L  L +  NK  ++P +I+ L  + +    L+L +NK+  LP  +  L  L ++
Sbjct: 252 IGELEQLGYLNIAGNKFTSVPEQIMMLSNIGK----LILSDNKISRLPVTLSRLATLKDM 307

Query: 274 SLRDNPL 280
           ++  NPL
Sbjct: 308 NITGNPL 314



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 111/222 (50%), Gaps = 26/222 (11%)

Query: 80  NLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM----SNLKNLKVFNLSG 135
           NL+ + LS+N++  LP  I+   L  L    N    + +P+++      +  L   +LSG
Sbjct: 1   NLQLIHLSDNKLETLPDGISRLQLHELYLEKNRF--KKIPEEVYLQPKVVNGLLTIDLSG 58

Query: 136 NQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLY 195
            +L   P ++ D   ++ L L NN L  +P EI +L KL  L L  N LT +P     L 
Sbjct: 59  KRLTSVPAEVFDSKDVERLDLSNNRLTSIPEEIGQLQKLRELKLDNNLLTQLPQAITTLP 118

Query: 196 QLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL------------ 243
            L+ + +SDN+LE+LP  IS L+ L  L LH+N+ + +P E+  L  L            
Sbjct: 119 NLQHIDVSDNKLETLPDGISRLQ-LHELFLHDNRFKEIPEEVCKLLQLNTFYLSGKGLTS 177

Query: 244 -------SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
                  +  ++ L+L  N+L ++P EI  L+ L EL L +N
Sbjct: 178 VPAEVFDATDIERLVLSENRLTSIPEEIGQLQKLRELKLENN 219



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 90/179 (50%), Gaps = 4/179 (2%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L+ N     P+   K   L +  LS   +T +P  + +   +  L+   N LT  S+P
Sbjct: 145 LFLHDNRFKEIPEEVCKLLQLNTFYLSGKGLTSVPAEVFDATDIERLVLSENRLT--SIP 202

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG-NNSLNHVPREINKLCKLHVLS 178
           +++  L+ L+   L  N L + P  I  +P L+++ +  NN L  +P  I +L +L  L+
Sbjct: 203 EEIGQLQKLRELKLENNLLTELPQAITTLPNLQHIDVSHNNGLESLPGGIGELEQLGYLN 262

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
           + GN  T +P+    L  +  LILSDN++  LP ++S L  LK + +  N L   P ++
Sbjct: 263 IAGNKFTSVPEQIMMLSNIGKLILSDNKISRLPVTLSRLATLKDMNITGNPLTYPPADV 321



 Score = 54.7 bits (130), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 42/142 (29%), Positives = 67/142 (47%), Gaps = 30/142 (21%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLT 114
           +I+ L+L  N L+  P+   +   LR L L NN +T LPQAIT  P L  + ++ NN L 
Sbjct: 187 DIERLVLSENRLTSIPEEIGQLQKLRELKLENNLLTELPQAITTLPNLQHIDVSHNNGL- 245

Query: 115 AESLPKDMSNLKNLKVFNLSGNQ-----------------------LEQFPIQILDIPTL 151
            ESLP  +  L+ L   N++GN+                       + + P+ +  + TL
Sbjct: 246 -ESLPGGIGELEQLGYLNIAGNKFTSVPEQIMMLSNIGKLILSDNKISRLPVTLSRLATL 304

Query: 152 KYLYLGNNSLNHVPREINKLCK 173
           K + +  N L + P ++   CK
Sbjct: 305 KDMNITGNPLTYPPADV---CK 323



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 15/137 (10%)

Query: 151 LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLY-------QLEALILS 203
           L+ ++L +N L  +P  I++L +LH L L  N    IP+   ++Y        L  + LS
Sbjct: 2   LQLIHLSDNKLETLPDGISRL-QLHELYLEKNRFKKIPE---EVYLQPKVVNGLLTIDLS 57

Query: 204 DNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTE 263
             +L S+PA + + K ++ L L NN+L ++P EI  L    +KL+ L L NN L  LP  
Sbjct: 58  GKRLTSVPAEVFDSKDVERLDLSNNRLTSIPEEIGQL----QKLRELKLDNNLLTQLPQA 113

Query: 264 IITLKCLSELSLRDNPL 280
           I TL  L  + + DN L
Sbjct: 114 ITTLPNLQHIDVSDNKL 130


>gi|417762588|ref|ZP_12410577.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|409941581|gb|EKN87209.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
          Length = 242

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 68/164 (41%), Positives = 100/164 (60%), Gaps = 4/164 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK +  LKNL++ +L  NQ +  P +I  +  L+ L L  N    VP++I +L  L V
Sbjct: 64  TLPKKIEQLKNLQMLDLCYNQFKTVPKKIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQV 123

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+L  N LT +P   G L  L+ L L  N+L++LP  I  LK L++L L+ N+L TLP E
Sbjct: 124 LNLSSNQLTTLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPRE 183

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L+ L+E    L L +N++ TLP EII L+ L +L+L +NP+
Sbjct: 184 IGRLQSLTE----LHLQHNQIATLPDEIIQLQNLRKLTLYENPI 223



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 65/199 (32%), Positives = 98/199 (49%), Gaps = 28/199 (14%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           ++  L+L    L+  P    +  NL+ LDL  N+                         +
Sbjct: 51  DVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQF------------------------K 86

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++PK +  LKNL++ +L  NQ +  P +I  +  L+ L L +N L  +P+EI KL  L V
Sbjct: 87  TVPKKIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQV 146

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+LG N L  +P     L  L+ L L+ NQL +LP  I  L+ L  L L +N++ TLP E
Sbjct: 147 LNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPREIGRLQSLTELHLQHNQIATLPDE 206

Query: 237 IITLKCLSEKLKSLLLHNN 255
           II L    + L+ L L+ N
Sbjct: 207 IIQL----QNLRKLTLYEN 221



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 91/168 (54%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L + + N  ++++  LS  +L   P +I  +  L+ L L  N    VP++I +L  
Sbjct: 38  TYRDLTEALQNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKKIEQLKN 97

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N    +P   G L  L+ L LS NQL +LP  I  L+ L+ L L +N+L+TL
Sbjct: 98  LQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLGSNRLKTL 157

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P  I  LK     L++L L+ N+L TLP EI  L+ L+EL L+ N + 
Sbjct: 158 PKGIEQLK----NLQTLYLNYNQLTTLPREIGRLQSLTELHLQHNQIA 201



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 81/173 (46%), Gaps = 24/173 (13%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           +N+  L L +N     P    +  NL+ LDL  N+                         
Sbjct: 73  KNLQMLDLCYNQFKTVPKKIEQLKNLQMLDLCYNQF------------------------ 108

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           +++PK +  LKNL+V NLS NQL   P +I  +  L+ L LG+N L  +P+ I +L  L 
Sbjct: 109 KTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQ 168

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
            L L  N LT +P   G L  L  L L  NQ+ +LP  I  L+ L+ L L+ N
Sbjct: 169 TLYLNYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYEN 221



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 50/167 (29%), Positives = 83/167 (49%), Gaps = 21/167 (12%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPN--------NDYNKKPE------NIDTLLLYHNNL 68
           +++ LD  Y+    +T+  +IE L N        N +   P+      N+  L L  N L
Sbjct: 74  NLQMLDLCYNQF--KTVPKKIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQL 131

Query: 69  SFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKN 127
           +  P    K  NL+ L+L +NR+  LP+ I     L TL    N LT  +LP+++  L++
Sbjct: 132 TTLPKEIGKLENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLT--TLPREIGRLQS 189

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           L   +L  NQ+   P +I+ +  L+ L L  N +   P+E++K+ KL
Sbjct: 190 LTELHLQHNQIATLPDEIIQLQNLRKLTLYENPIP--PQELDKIRKL 234


>gi|392396972|ref|YP_006433573.1| Leucine Rich Repeat (LRR)-containing protein [Flexibacter litoralis
           DSM 6794]
 gi|390528050|gb|AFM03780.1| Leucine Rich Repeat (LRR)-containing protein [Flexibacter litoralis
           DSM 6794]
          Length = 439

 Score =  106 bits (265), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 131/239 (54%), Gaps = 7/239 (2%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           +IE LP N    K   +++L+L HN  +  P   +  T+L+ L+LS N +  +P  I N+
Sbjct: 185 RIEKLPKNL--SKLNRLESLILNHNEFTSLPKQIATLTSLKELNLSMNELEVIPSFIGNY 242

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
               +++ +     E +P  +SNL  L+  ++  N L +FPI I+ +  LK L +  N +
Sbjct: 243 REMRVLSISATRLIE-IPDTLSNLLKLEELDIGFNHLREFPISIIKLTKLKKLDISANRI 301

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
           +++P +I+ L  +  L++  N L + P+    L +L+ L LS N +  +P SI  LK L+
Sbjct: 302 SNIPSQISALKNVEELNVNSNKLYNFPEEITSLTKLKKLDLSFNTISQIPFSIKKLKGLE 361

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           SL +  N+  + P EI++L     KL+ L L +N ++T+P  I  L  L EL+ R NPL
Sbjct: 362 SLDIAVNQFSSFPKEILSLT----KLEVLYLSSNSIQTIPLSIEKLTNLEELNCRQNPL 416



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 72/255 (28%), Positives = 117/255 (45%), Gaps = 31/255 (12%)

Query: 53  KKPEN----IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIA 108
           K P+N    +  L  Y N L   P   ++  +L+ L   +N I  LP  + N      + 
Sbjct: 74  KSPQNAKFRVVELKFYRNELKIVPVEIAQLIHLKKLSFPHNWIDDLPAELANLDKLEELE 133

Query: 109 RNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREI 168
            +N    +  P  ++ LKNLKV   + + + + P +I ++  L+ L L  N +  +P+ +
Sbjct: 134 IDNNYGLKHFPDVITKLKNLKVLKFTDSFITKIPKEIENLKMLRELDLSQNRIEKLPKNL 193

Query: 169 NKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA---------------- 212
           +KL +L  L L  N  T +P     L  L+ L LS N+LE +P+                
Sbjct: 194 SKLNRLESLILNHNEFTSLPKQIATLTSLKELNLSMNELEVIPSFIGNYREMRVLSISAT 253

Query: 213 -------SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
                  ++SNL  L+ L +  N LR  P  II L     KLK L +  N++  +P++I 
Sbjct: 254 RLIEIPDTLSNLLKLEELDIGFNHLREFPISIIKLT----KLKKLDISANRISNIPSQIS 309

Query: 266 TLKCLSELSLRDNPL 280
            LK + EL++  N L
Sbjct: 310 ALKNVEELNVNSNKL 324



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/156 (33%), Positives = 80/156 (51%), Gaps = 8/156 (5%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N+L  FP +  K T L+ LD+S NRI+++P  I+    +  L   +N L   + P+++++
Sbjct: 276 NHLREFPISIIKLTKLKKLDISANRISNIPSQISALKNVEELNVNSNKLY--NFPEEITS 333

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L  LK  +LS N + Q P  I  +  L+ L +  N  +  P+EI  L KL VL L  NS+
Sbjct: 334 LTKLKKLDLSFNTISQIPFSIKKLKGLESLDIAVNQFSSFPKEILSLTKLEVLYLSSNSI 393

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
             IP +   L  LE L    N     P S   +KM+
Sbjct: 394 QTIPLSIEKLTNLEELNCRQN-----PLSAETIKMI 424


>gi|220907479|ref|YP_002482790.1| hypothetical protein Cyan7425_2066 [Cyanothece sp. PCC 7425]
 gi|219864090|gb|ACL44429.1| leucine-rich repeat protein [Cyanothece sp. PCC 7425]
          Length = 508

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 95/263 (36%), Positives = 130/263 (49%), Gaps = 23/263 (8%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L  N +   PE I+ L       L +N L+  P   S  + L++LDL  N+IT LP+ I 
Sbjct: 186 LSRNHFTDLPEAINGLAHLCKLDLSYNKLTAIPAVISSLSQLQTLDLCANQITELPELIG 245

Query: 100 N-FPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
           +   L  L    NLL   +L   + +L NLKV +LS NQL   P  I  +  L+ LY+  
Sbjct: 246 SCIELQELSLSRNLLI--NLSAAIGSLTNLKVLDLSQNQLSHLPKSIGYLTQLQKLYIER 303

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P  I  L  L    L  N LT +P++ GDL QL  L    NQL +LP +I  L 
Sbjct: 304 NKLITLPESIGGLSNLQTFHLYRNQLTILPESIGDLIQLRELFAYQNQLTNLPGTIRFLT 363

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLL------LHNNKLRTLPTEIITLKCLSE 272
            L+ L L  N+L TLP E +T+ C  E L SLL      L +N++  LP  I  L  L E
Sbjct: 364 RLEKLNLSGNQLATLP-EGLTVLC--EALSSLLQLHYLNLSHNQIAQLPEAIGALTQLKE 420

Query: 273 L-----SLRDNPLVIRFVSDMTY 290
           L      L+D P  I  ++ + +
Sbjct: 421 LVLVCNHLKDLPASIGSLTQLQF 443



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 82/220 (37%), Positives = 112/220 (50%), Gaps = 7/220 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L +N L+  P+  S  T LR LDL +N ++ LP  I +   L  L    N LT  +LP+ 
Sbjct: 48  LSNNYLTTLPEEISALTQLRDLDLFSNSLSALPLGICSLTQLEVLDLIENQLT--NLPEA 105

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +S L  LK  +LS N     P+ I D+  L+ L L  N L  +P EI  L  L  L L  
Sbjct: 106 ISCLTQLKKLDLSNNHFTSLPVVIGDLAQLQVLGLHANKLTKLPAEIGCLVHLKELDLSN 165

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N+ TD+P    +L QL+ L LS N    LP +I+ L  L  L L  NKL  +P  I +L 
Sbjct: 166 NAFTDLPVAIANLNQLQTLDLSRNHFTDLPEAINGLAHLCKLDLSYNKLTAIPAVISSLS 225

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
               +L++L L  N++  LP  I +   L ELSL  N L+
Sbjct: 226 ----QLQTLDLCANQITELPELIGSCIELQELSLSRNLLI 261



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 78/218 (35%), Positives = 109/218 (50%), Gaps = 14/218 (6%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAE 116
           +  L +  N L   P++    +NL++  L  N++T LP++I +   L  L A  N LT  
Sbjct: 296 LQKLYIERNKLITLPESIGGLSNLQTFHLYRNQLTILPESIGDLIQLRELFAYQNQLT-- 353

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFP--IQIL-----DIPTLKYLYLGNNSLNHVPREIN 169
           +LP  +  L  L+  NLSGNQL   P  + +L      +  L YL L +N +  +P  I 
Sbjct: 354 NLPGTIRFLTRLEKLNLSGNQLATLPEGLTVLCEALSSLLQLHYLNLSHNQIAQLPEAIG 413

Query: 170 KLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
            L +L  L L  N L D+P + G L QL+ L +S N L  LP +I+ L  L+ L L +N 
Sbjct: 414 ALTQLKELVLVCNHLKDLPASIGSLTQLQFLYVSHNPLTHLPETINGLSQLQKLNLEHNH 473

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITL 267
           L  LP  I  L      LK L+L  NK   LPT I  L
Sbjct: 474 LSDLPAAIAALTL----LKELILSENKFTVLPTAIGAL 507



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 71/190 (37%), Positives = 95/190 (50%), Gaps = 6/190 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLT 114
           N+ T  LY N L+  P++      LR L    N++T+LP  I     L  L ++ N L T
Sbjct: 318 NLQTFHLYRNQLTILPESIGDLIQLRELFAYQNQLTNLPGTIRFLTRLEKLNLSGNQLAT 377

Query: 115 AES----LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
                  L + +S+L  L   NLS NQ+ Q P  I  +  LK L L  N L  +P  I  
Sbjct: 378 LPEGLTVLCEALSSLLQLHYLNLSHNQIAQLPEAIGALTQLKELVLVCNHLKDLPASIGS 437

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L +L  L +  N LT +P+T   L QL+ L L  N L  LPA+I+ L +LK L+L  NK 
Sbjct: 438 LTQLQFLYVSHNPLTHLPETINGLSQLQKLNLEHNHLSDLPAAIAALTLLKELILSENKF 497

Query: 231 RTLPTEIITL 240
             LPT I  L
Sbjct: 498 TVLPTAIGAL 507



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 80/213 (37%), Positives = 104/213 (48%), Gaps = 7/213 (3%)

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNL 125
            L+  P      T L+ LDLSNN +T LP+ I+    L  L   +N L+A  LP  + +L
Sbjct: 29  GLTELPTTIGTLTQLQKLDLSNNYLTTLPEEISALTQLRDLDLFSNSLSA--LPLGICSL 86

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
             L+V +L  NQL   P  I  +  LK L L NN    +P  I  L +L VL L  N LT
Sbjct: 87  TQLEVLDLIENQLTNLPEAISCLTQLKKLDLSNNHFTSLPVVIGDLAQLQVLGLHANKLT 146

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
            +P   G L  L+ L LS+N    LP +I+NL  L++L L  N    LP  I  L  L +
Sbjct: 147 KLPAEIGCLVHLKELDLSNNAFTDLPVAIANLNQLQTLDLSRNHFTDLPEAINGLAHLCK 206

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
               L L  NKL  +P  I +L  L  L L  N
Sbjct: 207 ----LDLSYNKLTAIPAVISSLSQLQTLDLCAN 235



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 86/249 (34%), Positives = 109/249 (43%), Gaps = 30/249 (12%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           ++ L L  N L+  P+  S  T L+ LDLSNN  T LP  I +   L  L    N LT  
Sbjct: 89  LEVLDLIENQLTNLPEAISCLTQLKKLDLSNNHFTSLPVVIGDLAQLQVLGLHANKLT-- 146

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            LP ++  L +LK  +LS N     P+ I ++  L+ L L  N    +P  IN L  L  
Sbjct: 147 KLPAEIGCLVHLKELDLSNNAFTDLPVAIANLNQLQTLDLSRNHFTDLPEAINGLAHLCK 206

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP-----------------------AS 213
           L L  N LT IP     L QL+ L L  NQ+  LP                       A+
Sbjct: 207 LDLSYNKLTAIPAVISSLSQLQTLDLCANQITELPELIGSCIELQELSLSRNLLINLSAA 266

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           I +L  LK L L  N+L  LP  I  L     +L+ L +  NKL TLP  I  L  L   
Sbjct: 267 IGSLTNLKVLDLSQNQLSHLPKSIGYLT----QLQKLYIERNKLITLPESIGGLSNLQTF 322

Query: 274 SLRDNPLVI 282
            L  N L I
Sbjct: 323 HLYRNQLTI 331



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/175 (33%), Positives = 88/175 (50%), Gaps = 12/175 (6%)

Query: 55  PENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF--PLSTL 106
           PE+I  L+       Y N L+  P      T L  L+LS N++  LP+ +T     LS+L
Sbjct: 333 PESIGDLIQLRELFAYQNQLTNLPGTIRFLTRLEKLNLSGNQLATLPEGLTVLCEALSSL 392

Query: 107 IARNNLLTAE----SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLN 162
           +  + L  +      LP+ +  L  LK   L  N L+  P  I  +  L++LY+ +N L 
Sbjct: 393 LQLHYLNLSHNQIAQLPEAIGALTQLKELVLVCNHLKDLPASIGSLTQLQFLYVSHNPLT 452

Query: 163 HVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           H+P  IN L +L  L+L  N L+D+P     L  L+ LILS+N+   LP +I  L
Sbjct: 453 HLPETINGLSQLQKLNLEHNHLSDLPAAIAALTLLKELILSENKFTVLPTAIGAL 507



 Score = 40.4 bits (93), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 48/97 (49%), Gaps = 6/97 (6%)

Query: 186 DIPDTFGDLYQLEA--LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           D      + +QL+A  L L +  L  LP +I  L  L+ L L NN L TLP EI  L   
Sbjct: 7   DAERRIEEAWQLQATELTLRNLGLTELPTTIGTLTQLQKLDLSNNYLTTLPEEISALT-- 64

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             +L+ L L +N L  LP  I +L  L  L L +N L
Sbjct: 65  --QLRDLDLFSNSLSALPLGICSLTQLEVLDLIENQL 99


>gi|296271631|ref|YP_003654262.1| hypothetical protein [Arcobacter nitrofigilis DSM 7299]
 gi|296095806|gb|ADG91756.1| leucine-rich repeat protein [Arcobacter nitrofigilis DSM 7299]
          Length = 330

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/230 (36%), Positives = 120/230 (52%), Gaps = 21/230 (9%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLK 129
            P++     NL  L LSNNR+  LP  I  F  L  L   NNLL+   +P  +  L  L 
Sbjct: 44  LPESFGVLQNLTVLKLSNNRLKKLPNCIGEFKYLKNLQCENNLLSE--IPSSIGKLSKLL 101

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
           + NL+GN+LE+ P ++ D+ +L  L L  N +  +  E+ KL KL   SL  N L ++PD
Sbjct: 102 ILNLNGNRLEELPKELYDLKSLTRLTLAANKIKRLDVELGKLSKLLYFSLDTNELDELPD 161

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT----EII------- 238
           +F  +  L  L +S N L  LP SIS +  L++LLL  N++  LP+    +++       
Sbjct: 162 SFSKMKSLYYLDVSFNNLTKLPKSISQIDELQTLLLEGNQIDDLPSLESHDMLIKLDLSD 221

Query: 239 -TLKCLS------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            +LK L       E LK L+L NN L  LP E+  L  L+ LS+  N L+
Sbjct: 222 NSLKSLDFNVSKLEDLKILILDNNFLVKLPDEVCDLTNLTNLSVSSNSLI 271



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 72/215 (33%), Positives = 113/215 (52%), Gaps = 8/215 (3%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
           +N LS  P +  K + L  L+L+ NR+  LP+ + +   L+ L    N    + L  ++ 
Sbjct: 84  NNLLSEIPSSIGKLSKLLILNLNGNRLEELPKELYDLKSLTRLTLAAN--KIKRLDVELG 141

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            L  L  F+L  N+L++ P     + +L YL +  N+L  +P+ I+++ +L  L L GN 
Sbjct: 142 KLSKLLYFSLDTNELDELPDSFSKMKSLYYLDVSFNNLTKLPKSISQIDELQTLLLEGNQ 201

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           + D+P +      L  L LSDN L+SL  ++S L+ LK L+L NN L  LP E+    C 
Sbjct: 202 IDDLP-SLESHDMLIKLDLSDNSLKSLDFNVSKLEDLKILILDNNFLVKLPDEV----CD 256

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
              L +L + +N L  LP  I  L+ L EL + DN
Sbjct: 257 LTNLTNLSVSSNSLIELPKNIGKLQNLEELDIEDN 291



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 62/165 (37%), Positives = 88/165 (53%), Gaps = 4/165 (2%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSN 124
           N L   PD+ SK  +L  LD+S N +T LP++I+    L TL+   N    + LP   S+
Sbjct: 154 NELDELPDSFSKMKSLYYLDVSFNNLTKLPKSISQIDELQTLLLEGN--QIDDLPSLESH 211

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
              +K+ +LS N L+     +  +  LK L L NN L  +P E+  L  L  LS+  NSL
Sbjct: 212 DMLIKL-DLSDNSLKSLDFNVSKLEDLKILILDNNFLVKLPDEVCDLTNLTNLSVSSNSL 270

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
            ++P   G L  LE L + DN +E LP S   LK LK+L L +N+
Sbjct: 271 IELPKNIGKLQNLEELDIEDNSVEKLPDSFFELKKLKNLYLADNE 315



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 44/127 (34%), Positives = 68/127 (53%), Gaps = 5/127 (3%)

Query: 155 YLGNNSLN-HVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           ++  N LN ++   I+ +  +  L L    + ++P++FG L  L  L LS+N+L+ LP  
Sbjct: 11  WVNVNGLNSYISTHIDDINGMTHLDLSKKKIRELPESFGVLQNLTVLKLSNNRLKKLPNC 70

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           I   K LK+L   NN L  +P+ I  L     KL  L L+ N+L  LP E+  LK L+ L
Sbjct: 71  IGEFKYLKNLQCENNLLSEIPSSIGKLS----KLLILNLNGNRLEELPKELYDLKSLTRL 126

Query: 274 SLRDNPL 280
           +L  N +
Sbjct: 127 TLAANKI 133


>gi|351712212|gb|EHB15131.1| Leucine-rich repeat-containing protein 58 [Heterocephalus glaber]
          Length = 241

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/214 (38%), Positives = 121/214 (56%), Gaps = 7/214 (3%)

Query: 27  LDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNL-SFFPDNASKFTNLRSLD 85
           L++S+ S+ SET+ ++ E         + E +  LLL HN L S  P   S F +L+ LD
Sbjct: 29  LNWSHLSVSSETVKSEREARSEERRGSQ-EALLWLLLPHNRLVSLTPALGSGFPHLQLLD 87

Query: 86  LSNNRITHL-PQAITNFPLSTLIARNNLLTA-ESLPKDMSNL---KNLKVFNLSGNQLEQ 140
           +S N +T L P+ +T   L TL+ARNN L    + PK +      + L+V NL GN  ++
Sbjct: 88  VSGNSLTALEPELLTLSGLRTLLARNNRLGGLGAQPKGLVQSPLSRRLQVPNLRGNCFQE 147

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P  +L +P L+ L LG N L ++P +I  L  L  L LGGN + +I     +L  L  L
Sbjct: 148 NPASLLGLPALQTLRLGLNQLQNIPAKIENLQSLECLCLGGNFIKEILPELANLPSLNYL 207

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
           +L DN+++S+P  +S L +L+SL LHNN L  LP
Sbjct: 208 VLCDNKIQSVPPQLSQLYLLRSLSLHNNLLTYLP 241



 Score = 58.9 bits (141), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/166 (30%), Positives = 84/166 (50%), Gaps = 10/166 (6%)

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC------ 172
           P   S   +L++ ++SGN L     ++L +  L+ L   NN L  +  +   L       
Sbjct: 74  PALGSGFPHLQLLDVSGNSLTALEPELLTLSGLRTLLARNNRLGGLGAQPKGLVQSPLSR 133

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           +L V +L GN   + P +   L  L+ L L  NQL+++PA I NL+ L+ L L  N ++ 
Sbjct: 134 RLQVPNLRGNCFQENPASLLGLPALQTLRLGLNQLQNIPAKIENLQSLECLCLGGNFIKE 193

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           +  E+  L      L  L+L +NK++++P ++  L  L  LSL +N
Sbjct: 194 ILPELANLP----SLNYLVLCDNKIQSVPPQLSQLYLLRSLSLHNN 235


>gi|330804386|ref|XP_003290176.1| hypothetical protein DICPUDRAFT_36946 [Dictyostelium purpureum]
 gi|325079687|gb|EGC33275.1| hypothetical protein DICPUDRAFT_36946 [Dictyostelium purpureum]
          Length = 343

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 100/294 (34%), Positives = 145/294 (49%), Gaps = 40/294 (13%)

Query: 18  SFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKP-----ENIDTLLLYHNNLSFFP 72
           + K+  +K L    S+L        IE   +N   + P     E +D L+L +N++S F 
Sbjct: 51  TIKSCRLKVLPSEISTLGGNLKKLHIE---DNKIQEIPNLEPLEQLDELILSNNDISKFQ 107

Query: 73  DNASKFTNLRSLDLSNNRITHLP----------------QAITNFP--------LSTLIA 108
            + SK  +LR LDLS N++  +P                   ++FP        L+TL  
Sbjct: 108 VSISKLPSLRVLDLSYNQLGTIPVRLFSLSSLRVLILDHNQFSHFPSHLCELQQLNTLGF 167

Query: 109 RNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREI 168
            +N L  +S+P  +  +  LK   LSGNQLE  P +I  + +L YL L +N L  +P E 
Sbjct: 168 SDNAL--KSIPSQIGQMTGLKKLILSGNQLESVPTEISLLKSLTYLDLSSNCLTSLPSEY 225

Query: 169 NKLCKLHVLSLGGNSLTDIPDTFG-DLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
            KLC L  L L  N L  IPD        L +L +++N L  LP++I  L  +  L L  
Sbjct: 226 GKLCGLEYLLLQHNRLRQIPDEIAVGCTSLVSLRVNNNTLTVLPSTIGQLSHMSELYLQE 285

Query: 228 NKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIIT-LKCLSELSLRDNPL 280
           N+L TLP EI +  C+   LK L L  NK+ +LP E ++ L CL+ L+L DN L
Sbjct: 286 NRLTTLPAEIGS--CV--LLKKLHLEYNKIISLPDEEMSKLNCLNVLTLHDNQL 335



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/227 (36%), Positives = 122/227 (53%), Gaps = 8/227 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFT-NLRSLDLSNNRITHLPQAITNFPLSTLIARNN 111
           K+  +I  L +    L   P   S    NL+ L + +N+I  +P       L  LI  NN
Sbjct: 42  KENSSISNLTIKSCRLKVLPSEISTLGGNLKKLHIEDNKIQEIPNLEPLEQLDELILSNN 101

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            ++   +   +S L +L+V +LS NQL   P+++  + +L+ L L +N  +H P  + +L
Sbjct: 102 DISKFQV--SISKLPSLRVLDLSYNQLGTIPVRLFSLSSLRVLILDHNQFSHFPSHLCEL 159

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
            +L+ L    N+L  IP   G +  L+ LILS NQLES+P  IS LK L  L L +N L 
Sbjct: 160 QQLNTLGFSDNALKSIPSQIGQMTGLKKLILSGNQLESVPTEISLLKSLTYLDLSSNCLT 219

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           +LP+E   L C    L+ LLL +N+LR +P E I + C S +SLR N
Sbjct: 220 SLPSEYGKL-C---GLEYLLLQHNRLRQIPDE-IAVGCTSLVSLRVN 261



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/246 (34%), Positives = 127/246 (51%), Gaps = 20/246 (8%)

Query: 20  KTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFT 79
           K  S++ LD SY+ L   T+  ++  L          ++  L+L HN  S FP +  +  
Sbjct: 112 KLPSLRVLDLSYNQLG--TIPVRLFSL---------SSLRVLILDHNQFSHFPSHLCELQ 160

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
            L +L  S+N +  +P  I     L  LI   N L  ES+P ++S LK+L   +LS N L
Sbjct: 161 QLNTLGFSDNALKSIPSQIGQMTGLKKLILSGNQL--ESVPTEISLLKSLTYLDLSSNCL 218

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC-KLHVLSLGGNSLTDIPDTFGDLYQL 197
              P +   +  L+YL L +N L  +P EI   C  L  L +  N+LT +P T G L  +
Sbjct: 219 TSLPSEYGKLCGLEYLLLQHNRLRQIPDEIAVGCTSLVSLRVNNNTLTVLPSTIGQLSHM 278

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT-LKCLSEKLKSLLLHNNK 256
             L L +N+L +LPA I +  +LK L L  NK+ +LP E ++ L CL+     L LH+N+
Sbjct: 279 SELYLQENRLTTLPAEIGSCVLLKKLHLEYNKIISLPDEEMSKLNCLN----VLTLHDNQ 334

Query: 257 LRTLPT 262
           L  LPT
Sbjct: 335 LEELPT 340


>gi|159487945|ref|XP_001701983.1| peptidyl-prolyl cis-trans isomerase, FKBP-type [Chlamydomonas
            reinhardtii]
 gi|158281202|gb|EDP06958.1| peptidyl-prolyl cis-trans isomerase, FKBP-type [Chlamydomonas
            reinhardtii]
          Length = 1784

 Score =  106 bits (264), Expect = 2e-20,   Method: Composition-based stats.
 Identities = 86/240 (35%), Positives = 116/240 (48%), Gaps = 15/240 (6%)

Query: 58   IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE- 116
            +  L L+ N L   P    + ++L  L L+ NR+T LP  I N    T I R  +   E 
Sbjct: 1555 VKHLSLHFNQLESLPGEIGQCSSLVWLSLNANRLTQLPPEIGNL---TNIVRLAVHINEL 1611

Query: 117  -SLPKDMSNLKNLKVFNLSGNQLEQFPIQILD--IPTLKYLYLGNNSLNHVPREINKLCK 173
             SLP ++  L  L+  +L  N+L   P ++L     T   L L  N L  VP+EI KL  
Sbjct: 1612 HSLPAELGRLP-LEAVSLFKNKLVTLPPELLLGLAGTCCRLGLYENELREVPKEIGKLSL 1670

Query: 174  LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
            L  L L  N LT +P   G+L +L  L L  NQL  LP  IS L  L+ L L NN+L  L
Sbjct: 1671 LQELWLYSNQLTSVPPEIGELTELRRLWLDRNQLTHLPKEISKLTRLQELYLDNNQLVEL 1730

Query: 234  PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELS-LRDNPLVIRFVSDMTYKP 292
            P E+ ++     +L+ L L  N    LP  +  L CL+E +    NP    F S+  YKP
Sbjct: 1731 PEELASMT----QLRKLYLDGNPNLVLPPAVAALPCLTESADYGTNPEA--FKSEAQYKP 1784



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 85/255 (33%), Positives = 120/255 (47%), Gaps = 17/255 (6%)

Query: 68   LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDM-SNL 125
            +S  P    +  +L  L LSNN +  LP+ + N   L +L   +NLL A  LP  + S L
Sbjct: 1425 VSEVPPEFFQLPDLEKLWLSNNGLRTLPEEVANLRSLDSLWLGSNLLRA--LPGGLNSGL 1482

Query: 126  KNLKVFNLSGNQLE-QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
              L+   L  N L    P ++  I +L++L +  N L  V  EI +L  L  L L  N L
Sbjct: 1483 SCLRKLWLPANMLSGTLPAEVCAITSLEWLDVSENKLTEVCPEIGQLQSLTRLDLHTNML 1542

Query: 185  TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
              +P T G L +++ L L  NQLESLP  I     L  L L+ N+L  LP EI  L    
Sbjct: 1543 RGLPATIGLLTRVKHLSLHFNQLESLPGEIGQCSSLVWLSLNANRLTQLPPEIGNLT--- 1599

Query: 245  EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLK 304
              +  L +H N+L +LP E+  L  L  +SL  N LV       T  P  LL LA    +
Sbjct: 1600 -NIVRLAVHINELHSLPAELGRLP-LEAVSLFKNKLV-------TLPPELLLGLAGTCCR 1650

Query: 305  VHEIDYSQEHLPQNL 319
            +   +     +P+ +
Sbjct: 1651 LGLYENELREVPKEI 1665



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Composition-based stats.
 Identities = 85/286 (29%), Positives = 135/286 (47%), Gaps = 34/286 (11%)

Query: 57   NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN--FPLSTLIARNNLLT 114
            +++ L L +N L   P+  +   +L SL L +N +  LP  + +    L  L    N+L+
Sbjct: 1437 DLEKLWLSNNGLRTLPEEVANLRSLDSLWLGSNLLRALPGGLNSGLSCLRKLWLPANMLS 1496

Query: 115  AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +LP ++  + +L+  ++S N+L +   +I  + +L  L L  N L  +P  I  L ++
Sbjct: 1497 G-TLPAEVCAITSLEWLDVSENKLTEVCPEIGQLQSLTRLDLHTNMLRGLPATIGLLTRV 1555

Query: 175  HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
              LSL  N L  +P   G    L  L L+ N+L  LP  I NL  +  L +H N+L +LP
Sbjct: 1556 KHLSLHFNQLESLPGEIGQCSSLVWLSLNANRLTQLPPEIGNLTNIVRLAVHINELHSLP 1615

Query: 235  TEI--ITLKCLS---EKLKSLL---------------LHNNKLRTLPTEIITLKCLSELS 274
             E+  + L+ +S    KL +L                L+ N+LR +P EI  L  L EL 
Sbjct: 1616 AELGRLPLEAVSLFKNKLVTLPPELLLGLAGTCCRLGLYENELREVPKEIGKLSLLQELW 1675

Query: 275  LRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQ-EHLPQNL 319
            L  N L        T  PP + EL    L+   +D +Q  HLP+ +
Sbjct: 1676 LYSNQL--------TSVPPEIGELTE--LRRLWLDRNQLTHLPKEI 1711



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 73/230 (31%), Positives = 109/230 (47%), Gaps = 16/230 (6%)

Query: 56   ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN-NLLT 114
            +++  L L+ N L   P      T ++ L L  N++  LP  I        ++ N N LT
Sbjct: 1530 QSLTRLDLHTNMLRGLPATIGLLTRVKHLSLHFNQLESLPGEIGQCSSLVWLSLNANRLT 1589

Query: 115  AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREI-----N 169
               LP ++ NL N+    +  N+L   P ++  +P L+ + L  N L  +P E+      
Sbjct: 1590 --QLPPEIGNLTNIVRLAVHINELHSLPAELGRLP-LEAVSLFKNKLVTLPPELLLGLAG 1646

Query: 170  KLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
              C+L    L  N L ++P   G L  L+ L L  NQL S+P  I  L  L+ L L  N+
Sbjct: 1647 TCCRL---GLYENELREVPKEIGKLSLLQELWLYSNQLTSVPPEIGELTELRRLWLDRNQ 1703

Query: 230  LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
            L  LP EI  L     +L+ L L NN+L  LP E+ ++  L +L L  NP
Sbjct: 1704 LTHLPKEISKLT----RLQELYLDNNQLVELPEELASMTQLRKLYLDGNP 1749



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Composition-based stats.
 Identities = 86/276 (31%), Positives = 121/276 (43%), Gaps = 34/276 (12%)

Query: 33   SLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLS-FFPDNASKFTNLRSLDLSNNRI 91
            SLDS  L + +        N     +  L L  N LS   P      T+L  LD+S N++
Sbjct: 1460 SLDSLWLGSNLLRALPGGLNSGLSCLRKLWLPANMLSGTLPAEVCAITSLEWLDVSENKL 1519

Query: 92   THLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPT 150
            T +   I     L+ L    N+L    LP  +  L  +K  +L  NQLE  P +I    +
Sbjct: 1520 TEVCPEIGQLQSLTRLDLHTNML--RGLPATIGLLTRVKHLSLHFNQLESLPGEIGQCSS 1577

Query: 151  LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA----------- 199
            L +L L  N L  +P EI  L  +  L++  N L  +P   G L  LEA           
Sbjct: 1578 LVWLSLNANRLTQLPPEIGNLTNIVRLAVHINELHSLPAELGRL-PLEAVSLFKNKLVTL 1636

Query: 200  --------------LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
                          L L +N+L  +P  I  L +L+ L L++N+L ++P EI  L     
Sbjct: 1637 PPELLLGLAGTCCRLGLYENELREVPKEIGKLSLLQELWLYSNQLTSVPPEIGELT---- 1692

Query: 246  KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            +L+ L L  N+L  LP EI  L  L EL L +N LV
Sbjct: 1693 ELRRLWLDRNQLTHLPKEISKLTRLQELYLDNNQLV 1728



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Composition-based stats.
 Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 9/113 (7%)

Query: 170  KLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
            +L +L V + G   ++++P  F  L  LE L LS+N L +LP  ++NL+ L SL L +N 
Sbjct: 1414 RLIELMVDACG---VSEVPPEFFQLPDLEKLWLSNNGLRTLPEEVANLRSLDSLWLGSNL 1470

Query: 230  LRTLPTEIIT-LKCLSEKLKSLLLHNNKLR-TLPTEIITLKCLSELSLRDNPL 280
            LR LP  + + L C    L+ L L  N L  TLP E+  +  L  L + +N L
Sbjct: 1471 LRALPGGLNSGLSC----LRKLWLPANMLSGTLPAEVCAITSLEWLDVSENKL 1519



 Score = 55.5 bits (132), Expect = 4e-05,   Method: Composition-based stats.
 Identities = 49/159 (30%), Positives = 68/159 (42%), Gaps = 21/159 (13%)

Query: 143  IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
            +++ D   L  L +    ++ VP E  +L  L  L L  N L  +P+   +L  L++L L
Sbjct: 1407 VKVSDDGRLIELMVDACGVSEVPPEFFQLPDLEKLWLSNNGLRTLPEEVANLRSLDSLWL 1466

Query: 203  SDNQLESLPASI-SNLKMLKSLLLHNNKLR-TLPTEIITLKCLS---------------- 244
              N L +LP  + S L  L+ L L  N L  TLP E+  +  L                 
Sbjct: 1467 GSNLLRALPGGLNSGLSCLRKLWLPANMLSGTLPAEVCAITSLEWLDVSENKLTEVCPEI 1526

Query: 245  ---EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
               + L  L LH N LR LP  I  L  +  LSL  N L
Sbjct: 1527 GQLQSLTRLDLHTNMLRGLPATIGLLTRVKHLSLHFNQL 1565


>gi|307106925|gb|EFN55169.1| hypothetical protein CHLNCDRAFT_35589, partial [Chlorella
           variabilis]
          Length = 381

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/196 (38%), Positives = 99/196 (50%), Gaps = 8/196 (4%)

Query: 84  LDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
           LDLS+  +  +P A  + P L  L    N L    LP D+S L +L    L+GNQL   P
Sbjct: 117 LDLSDCELQGVPPAAFDLPELEELSLAGNQLP--ELPADISRLASLSRLQLAGNQLAALP 174

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
             I  +  L+ L+L  N L  +P E+ +L  L  LSL GN L  +PD    L  L+ L  
Sbjct: 175 AGICALTALRGLWLHGNLLRELPAELGRLSALTQLSLSGNRLEALPDGLSGLVALQELSC 234

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNN-KLRTLP 261
           + NQL +LP+SI  L  L+ L LH N+LR LP+ I  L  L E    L L  N  L  LP
Sbjct: 235 AGNQLAALPSSIGRLASLQKLSLHGNQLRELPSHIGGLTSLQE----LSLQGNPGLAFLP 290

Query: 262 TEIITLKCLSELSLRD 277
             + TL  L +L   D
Sbjct: 291 DALGTLPALRDLCAAD 306



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/201 (35%), Positives = 100/201 (49%), Gaps = 5/201 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           + +P    +L  L+  +L+GNQL + P  I  + +L  L L  N L  +P  I  L  L 
Sbjct: 125 QGVPPAAFDLPELEELSLAGNQLPELPADISRLASLSRLQLAGNQLAALPAGICALTALR 184

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L GN L ++P   G L  L  L LS N+LE+LP  +S L  L+ L    N+L  LP+
Sbjct: 185 GLWLHGNLLRELPAELGRLSALTQLSLSGNRLEALPDGLSGLVALQELSCAGNQLAALPS 244

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
            I  L      L+ L LH N+LR LP+ I  L  L ELSL+ NP  + F+ D     P+L
Sbjct: 245 SIGRLA----SLQKLSLHGNQLRELPSHIGGLTSLQELSLQGNP-GLAFLPDALGTLPAL 299

Query: 296 LELASRTLKVHEIDYSQEHLP 316
            +L +    +  +  S    P
Sbjct: 300 RDLCAADCGLAAVPSSLRAAP 320



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 94/203 (46%), Gaps = 8/203 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           ++  L L  N L+  P      T LR L L  N +  LP  +     L+ L    N L  
Sbjct: 159 SLSRLQLAGNQLAALPAGICALTALRGLWLHGNLLRELPAELGRLSALTQLSLSGNRL-- 216

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           E+LP  +S L  L+  + +GNQL   P  I  + +L+ L L  N L  +P  I  L  L 
Sbjct: 217 EALPDGLSGLVALQELSCAGNQLAALPSSIGRLASLQKLSLHGNQLRELPSHIGGLTSLQ 276

Query: 176 VLSLGGN-SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            LSL GN  L  +PD  G L  L  L  +D  L ++P+S+    +L SL L+ N L   P
Sbjct: 277 ELSLQGNPGLAFLPDALGTLPALRDLCAADCGLAAVPSSLRAAPVLHSLSLYGNCLHEFP 336

Query: 235 TEIITLKCLSEKLKSLLLHNNKL 257
             ++     +  L++L L  N L
Sbjct: 337 AAVLQ----APSLRTLWLEGNPL 355



 Score = 39.3 bits (90), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 47/185 (25%), Positives = 64/185 (34%), Gaps = 52/185 (28%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAE 116
           +  L L+ N L   P    + + L  L LS NR+  LP  ++    L  L    N L A 
Sbjct: 183 LRGLWLHGNLLRELPAELGRLSALTQLSLSGNRLEALPDGLSGLVALQELSCAGNQLAA- 241

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN----------------- 159
            LP  +  L +L+  +L GNQL + P  I  + +L+ L L  N                 
Sbjct: 242 -LPSSIGRLASLQKLSLHGNQLRELPSHIGGLTSLQELSLQGNPGLAFLPDALGTLPALR 300

Query: 160 -------SLNHVPREINKLCKLHVLSL-----------------------GGNSLTDIPD 189
                   L  VP  +     LH LSL                        GN LT  P+
Sbjct: 301 DLCAADCGLAAVPSSLRAAPVLHSLSLYGNCLHEFPAAVLQAPSLRTLWLEGNPLT--PE 358

Query: 190 TFGDL 194
               L
Sbjct: 359 AVAGL 363


>gi|424842302|ref|ZP_18266927.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
 gi|395320500|gb|EJF53421.1| leucine-rich repeat (LRR) protein [Saprospira grandis DSM 2844]
          Length = 600

 Score =  106 bits (264), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 94/265 (35%), Positives = 132/265 (49%), Gaps = 19/265 (7%)

Query: 37  ETL--ATQIELLP--NNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           ETL  A+ +E+L   +N   K PE       +  L   HN L   P       NL  L +
Sbjct: 204 ETLSGASALEVLAVDDNRLKKLPEALVYLKKLTFLFAAHNQLQELPPQIGSSRNLLKLCV 263

Query: 87  SNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI 145
            +N++  LP++I     L  L   +N L  + LPK+   LK L+   L  NQL   PI  
Sbjct: 264 EHNQLQRLPESIGQLQKLELLRLEHNQL--KQLPKNFGQLKALRKLYLDSNQLTVLPINF 321

Query: 146 LDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDN 205
            ++  L+ LYL +N L  +P  I    +L  L L  N++T +PD+ G LYQLE L ++DN
Sbjct: 322 GELTALENLYLNDNQLTSLPSGIGNCKELRELFLNNNAMTSLPDSMGSLYQLEELYMNDN 381

Query: 206 QLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK-LKSLLLHNNKLRTLPTEI 264
           Q+ +LP+S   LK LK L L NNK+  L  +   L C   K L ++ L NN  + LP  +
Sbjct: 382 QIANLPSSFGGLKNLKLLYLTNNKINRLSKD---LDCSGWKRLSAIYLENNAFQKLPKAL 438

Query: 265 ITLKCLSELSLRDNPLVIRFVSDMT 289
            T   L  L L  N  +I  V+D T
Sbjct: 439 ETAPQLQTLYLDGN--LISEVNDST 461



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 117/246 (47%), Gaps = 26/246 (10%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA- 115
           ++ L L +N L + P+      NLR L +  N +  LP  +     L+ + A NN L + 
Sbjct: 120 LEELRLSNNQLQYLPEKIKGLRNLRRLYIDGNELRMLPNNLAEIRKLAFIAAENNQLQSI 179

Query: 116 --------------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLY 155
                               + LP+ +S    L+V  +  N+L++ P  ++ +  L +L+
Sbjct: 180 PETLGKLKRLRSLLLDKNQLQYLPETLSGASALEVLAVDDNRLKKLPEALVYLKKLTFLF 239

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
             +N L  +P +I     L  L +  N L  +P++ G L +LE L L  NQL+ LP +  
Sbjct: 240 AAHNQLQELPPQIGSSRNLLKLCVEHNQLQRLPESIGQLQKLELLRLEHNQLKQLPKNFG 299

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            LK L+ L L +N+L  LP     L      L++L L++N+L +LP+ I   K L EL L
Sbjct: 300 QLKALRKLYLDSNQLTVLPINFGELTA----LENLYLNDNQLTSLPSGIGNCKELRELFL 355

Query: 276 RDNPLV 281
            +N + 
Sbjct: 356 NNNAMT 361



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 122/247 (49%), Gaps = 22/247 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           + +  L L +++L    D+  +F +L  L+L NN +  LP  + + P L  L   NN L 
Sbjct: 72  DRVHRLDLSNDSLVSLGDSIREFRHLFFLNLENNYLKELPDGLFDLPYLEELRLSNNQL- 130

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            + LP+ +  L+NL+   + GN+L   P  + +I  L ++   NN L  +P  + KL +L
Sbjct: 131 -QYLPEKIKGLRNLRRLYIDGNELRMLPNNLAEIRKLAFIAAENNQLQSIPETLGKLKRL 189

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P+T      LE L + DN+L+ LP ++  LK L  L   +N+L+ LP
Sbjct: 190 RSLLLDKNQLQYLPETLSGASALEVLAVDDNRLKKLPEALVYLKKLTFLFAAHNQLQELP 249

Query: 235 TEIITLK-----CLS--------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            +I + +     C+               +KL+ L L +N+L+ LP     LK L +L L
Sbjct: 250 PQIGSSRNLLKLCVEHNQLQRLPESIGQLQKLELLRLEHNQLKQLPKNFGQLKALRKLYL 309

Query: 276 RDNPLVI 282
             N L +
Sbjct: 310 DSNQLTV 316



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 82/258 (31%), Positives = 134/258 (51%), Gaps = 25/258 (9%)

Query: 84  LDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
           LDLSN+ +  L  +I  F  L  L   NN L  + LP  + +L  L+   LS NQL+  P
Sbjct: 77  LDLSNDSLVSLGDSIREFRHLFFLNLENNYL--KELPDGLFDLPYLEELRLSNNQLQYLP 134

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
            +I  +  L+ LY+  N L  +P  + ++ KL  ++   N L  IP+T G L +L +L+L
Sbjct: 135 EKIKGLRNLRRLYIDGNELRMLPNNLAEIRKLAFIAAENNQLQSIPETLGKLKRLRSLLL 194

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
             NQL+ LP ++S    L+ L + +N+L+ LP  ++ LK    KL  L   +N+L+ LP 
Sbjct: 195 DKNQLQYLPETLSGASALEVLAVDDNRLKKLPEALVYLK----KLTFLFAAHNQLQELPP 250

Query: 263 EIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQ-EHLPQNLVQ 321
           +I + + L +L +  N L           P S+ +L  + L++  ++++Q + LP+N  Q
Sbjct: 251 QIGSSRNLLKLCVEHNQL--------QRLPESIGQL--QKLELLRLEHNQLKQLPKNFGQ 300

Query: 322 -------YLESAHHCVNP 332
                  YL+S    V P
Sbjct: 301 LKALRKLYLDSNQLTVLP 318



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 82/175 (46%), Gaps = 3/175 (1%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           +  L L +N ++  PD+      L  L +++N+I +LP +      L  L   NN +   
Sbjct: 350 LRELFLNNNAMTSLPDSMGSLYQLEELYMNDNQIANLPSSFGGLKNLKLLYLTNNKINRL 409

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHV-PREINKLCKLH 175
           S   D S  K L    L  N  ++ P  +   P L+ LYL  N ++ V    I K+ K+ 
Sbjct: 410 SKDLDCSGWKRLSAIYLENNAFQKLPKALETAPQLQTLYLDGNLISEVNDSTIIKMPKIE 469

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
            +SL  N L+++PD  G  + +  L L  N +  LP SI   K L+ L L  NK+
Sbjct: 470 HISLNDNQLSELPDNMGS-WPIRHLALERNGIMDLPESIRYFKNLELLDLAGNKI 523



 Score = 38.9 bits (89), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 32/111 (28%), Positives = 54/111 (48%), Gaps = 3/111 (2%)

Query: 76  SKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLS 134
           S +  L ++ L NN    LP+A+   P L TL    NL++ E     +  +  ++  +L+
Sbjct: 416 SGWKRLSAIYLENNAFQKLPKALETAPQLQTLYLDGNLIS-EVNDSTIIKMPKIEHISLN 474

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
            NQL + P  +   P +++L L  N +  +P  I     L +L L GN +T
Sbjct: 475 DNQLSELPDNMGSWP-IRHLALERNGIMDLPESIRYFKNLELLDLAGNKIT 524


>gi|124002073|ref|ZP_01686927.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123992539|gb|EAY31884.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 506

 Score =  106 bits (264), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/227 (37%), Positives = 117/227 (51%), Gaps = 9/227 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           N+  L L  N L+  P      T L+ L +++NR++ L   I N   L  L +A N L+ 
Sbjct: 129 NLYKLRLNRNELTILPAEIGNLTKLQELYITDNRLSALSAEIGNLTQLQKLELAVNRLV- 187

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  L  LK   +  NQL   P +I  + +L+ LY+ NN    +P EI  L  L
Sbjct: 188 --ALPAEIGKLTQLKKLEVGSNQLTTLPAEISGLTSLEELYIDNNQFTTLPTEIGTLSNL 245

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L +  N L  +P   G+L  L+ L + +NQL +LPA I  L+ L+ L L +N+L  LP
Sbjct: 246 KFLYVSDNQLATLPSEIGNLTTLQELYIEENQLIALPAEIGTLQSLQLLHLQSNQLSELP 305

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           TEI     L   L+ L L  N L TLP  I  LKCL EL +  N LV
Sbjct: 306 TEI----GLVGDLRILCLEENLLTTLPNTIGQLKCLEELRIWKNDLV 348



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/181 (39%), Positives = 100/181 (55%), Gaps = 5/181 (2%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLTAESLPKDMS 123
           N LS  P       +LR L L  N +T LP  I     L  L I +N+L+   +LP ++ 
Sbjct: 299 NQLSELPTEIGLVGDLRILCLEENLLTTLPNTIGQLKCLEELRIWKNDLV---ALPLEID 355

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           +LKNL   ++S N+L  FP+QI  +  L+ L +  N L  +P EIN+L KL  L+LGGN+
Sbjct: 356 SLKNLHTLDISFNKLSTFPLQITQLEGLQKLNVAENGLTDLPDEINQLVKLEELNLGGNN 415

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT +P     L +L+ L L  N+LE LP+ +  L  L+ L L  N L T+P EI  LK L
Sbjct: 416 LTSLPAGLAKLQKLQNLDLRYNELEVLPSEVFALSNLQELNLMGNYLTTIPVEITKLKKL 475

Query: 244 S 244
            
Sbjct: 476 Q 476



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 66/164 (40%), Positives = 93/164 (56%), Gaps = 4/164 (2%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LP ++  L NL    L+ N+L   P +I ++  L+ LY+ +N L+ +  EI  L +L  L
Sbjct: 120 LPPEVGALTNLYKLRLNRNELTILPAEIGNLTKLQELYITDNRLSALSAEIGNLTQLQKL 179

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            L  N L  +P   G L QL+ L +  NQL +LPA IS L  L+ L + NN+  TLPTEI
Sbjct: 180 ELAVNRLVALPAEIGKLTQLKKLEVGSNQLTTLPAEISGLTSLEELYIDNNQFTTLPTEI 239

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            TL      LK L + +N+L TLP+EI  L  L EL + +N L+
Sbjct: 240 GTLS----NLKFLYVSDNQLATLPSEIGNLTTLQELYIEENQLI 279



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 83/239 (34%), Positives = 114/239 (47%), Gaps = 30/239 (12%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L   P    K T L+ L++ +N++T LP  I+    L  L   NN  T  +LP ++  
Sbjct: 184 NRLVALPAEIGKLTQLKKLEVGSNQLTTLPAEISGLTSLEELYIDNNQFT--TLPTEIGT 241

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL----------------------- 161
           L NLK   +S NQL   P +I ++ TL+ LY+  N L                       
Sbjct: 242 LSNLKFLYVSDNQLATLPSEIGNLTTLQELYIEENQLIALPAEIGTLQSLQLLHLQSNQL 301

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
           + +P EI  +  L +L L  N LT +P+T G L  LE L +  N L +LP  I +LK L 
Sbjct: 302 SELPTEIGLVGDLRILCLEENLLTTLPNTIGQLKCLEELRIWKNDLVALPLEIDSLKNLH 361

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +L +  NKL T P +I  L    E L+ L +  N L  LP EI  L  L EL+L  N L
Sbjct: 362 TLDISFNKLSTFPLQITQL----EGLQKLNVAENGLTDLPDEINQLVKLEELNLGGNNL 416



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 85/259 (32%), Positives = 117/259 (45%), Gaps = 36/259 (13%)

Query: 48  NNDYNKKPENIDTL----LLY--HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI--- 98
           NN +   P  I TL     LY   N L+  P      T L+ L +  N++  LP  I   
Sbjct: 229 NNQFTTLPTEIGTLSNLKFLYVSDNQLATLPSEIGNLTTLQELYIEENQLIALPAEIGTL 288

Query: 99  -------------TNFP--------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
                        +  P        L  L    NLLT  +LP  +  LK L+   +  N 
Sbjct: 289 QSLQLLHLQSNQLSELPTEIGLVGDLRILCLEENLLT--TLPNTIGQLKCLEELRIWKND 346

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           L   P++I  +  L  L +  N L+  P +I +L  L  L++  N LTD+PD    L +L
Sbjct: 347 LVALPLEIDSLKNLHTLDISFNKLSTFPLQITQLEGLQKLNVAENGLTDLPDEINQLVKL 406

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
           E L L  N L SLPA ++ L+ L++L L  N+L  LP+E+  L  L E    L L  N L
Sbjct: 407 EELNLGGNNLTSLPAGLAKLQKLQNLDLRYNELEVLPSEVFALSNLQE----LNLMGNYL 462

Query: 258 RTLPTEIITLKCLSELSLR 276
            T+P EI  LK L  L L+
Sbjct: 463 TTIPVEITKLKKLQYLYLQ 481



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/175 (34%), Positives = 90/175 (51%), Gaps = 14/175 (8%)

Query: 114 TAESLPKDMSNLKNLKV----------FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNH 163
           T E+   D+ +L++L+V           NLS   +   P +I  +  L+ L      L  
Sbjct: 60  TLEAPNTDVKDLESLEVEHIMVFNQAKLNLSYKHISVLPAEIAGLTHLQKLDCMAIGLTI 119

Query: 164 VPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL 223
           +P E+  L  L+ L L  N LT +P   G+L +L+ L ++DN+L +L A I NL  L+ L
Sbjct: 120 LPPEVGALTNLYKLRLNRNELTILPAEIGNLTKLQELYITDNRLSALSAEIGNLTQLQKL 179

Query: 224 LLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L  N+L  LP EI  L     +LK L + +N+L TLP EI  L  L EL + +N
Sbjct: 180 ELAVNRLVALPAEIGKLT----QLKKLEVGSNQLTTLPAEISGLTSLEELYIDNN 230


>gi|429961718|gb|ELA41263.1| hypothetical protein VICG_01752, partial [Vittaforma corneae ATCC
           50505]
          Length = 342

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 102/264 (38%), Positives = 140/264 (53%), Gaps = 18/264 (6%)

Query: 20  KTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFT 79
           + V++KTLD + ++L  ETL ++I  L N         +  L L +NNL   P    K T
Sbjct: 40  RLVNLKTLDLNINNL--ETLPSEIGDLVN---------LQKLYLNNNNLETLPSEIGKLT 88

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           NL+ L L +N +  LP  I     L  L   NN L    LPK +  L NL+   LSGN +
Sbjct: 89  NLQDLHLIDNNLETLPSEIGELKRLRNLHLSNNNLKI-LLPK-IGGLVNLRELYLSGNNI 146

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
           E  P +I D+  L+ L+L NN L   P  I KL  L  L L GN L  +P     L  LE
Sbjct: 147 EALPSEIGDLVNLRNLHLNNNKLKSFPVVIGKLTNLQELHLNGNKLKSLPSEIRTLKNLE 206

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L L+DN+ E L   I  L+ LK L   +NKL++LP +I  LK     L+++ L+NN+L 
Sbjct: 207 ILYLNDNEFEPLSTEIGELENLKMLHFRDNKLKSLPAKIGKLK----NLETIYLNNNELE 262

Query: 259 TLPTEIITLKCLSELSLRDNPLVI 282
           +LP+EI  L+ L  L LR+N L +
Sbjct: 263 SLPSEIGELRNLRYLDLRNNKLKV 286



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 123/224 (54%), Gaps = 7/224 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           ++ L L  N L   P    +  NL++LDL+ N +  LP  I +   L  L   NN L  E
Sbjct: 21  LEKLDLSVNKLESLPPEIGRLVNLKTLDLNINNLETLPSEIGDLVNLQKLYLNNNNL--E 78

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LP ++  L NL+  +L  N LE  P +I ++  L+ L+L NN+L  +  +I  L  L  
Sbjct: 79  TLPSEIGKLTNLQDLHLIDNNLETLPSEIGELKRLRNLHLSNNNLKILLPKIGGLVNLRE 138

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L GN++  +P   GDL  L  L L++N+L+S P  I  L  L+ L L+ NKL++LP+E
Sbjct: 139 LYLSGNNIEALPSEIGDLVNLRNLHLNNNKLKSFPVVIGKLTNLQELHLNGNKLKSLPSE 198

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I TLK     L+ L L++N+   L TEI  L+ L  L  RDN L
Sbjct: 199 IRTLK----NLEILYLNDNEFEPLSTEIGELENLKMLHFRDNKL 238



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/148 (39%), Positives = 79/148 (53%), Gaps = 4/148 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           S+  ++  L  L+  +LS N+LE  P +I  +  LK L L  N+L  +P EI  L  L  
Sbjct: 10  SIDSNIKRLVKLEKLDLSVNKLESLPPEIGRLVNLKTLDLNINNLETLPSEIGDLVNLQK 69

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N+L  +P   G L  L+ L L DN LE+LP+ I  LK L++L L NN L+ L  +
Sbjct: 70  LYLNNNNLETLPSEIGKLTNLQDLHLIDNNLETLPSEIGELKRLRNLHLSNNNLKILLPK 129

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           I  L  L E    L L  N +  LP+EI
Sbjct: 130 IGGLVNLRE----LYLSGNNIEALPSEI 153



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/115 (44%), Positives = 65/115 (56%), Gaps = 4/115 (3%)

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           I +L KL  L L  N L  +P   G L  L+ L L+ N LE+LP+ I +L  L+ L L+N
Sbjct: 15  IKRLVKLEKLDLSVNKLESLPPEIGRLVNLKTLDLNINNLETLPSEIGDLVNLQKLYLNN 74

Query: 228 NKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           N L TLP+EI  L      L+ L L +N L TLP+EI  LK L  L L +N L I
Sbjct: 75  NNLETLPSEIGKLT----NLQDLHLIDNNLETLPSEIGELKRLRNLHLSNNNLKI 125



 Score = 66.2 bits (160), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 80/179 (44%), Gaps = 26/179 (14%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN----------------FP---- 102
           L +NNL           NLR L LS N I  LP  I +                FP    
Sbjct: 118 LSNNNLKILLPKIGGLVNLRELYLSGNNIEALPSEIGDLVNLRNLHLNNNKLKSFPVVIG 177

Query: 103 ----LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L  L    N L  +SLP ++  LKNL++  L+ N+ E    +I ++  LK L+  +
Sbjct: 178 KLTNLQELHLNGNKL--KSLPSEIRTLKNLEILYLNDNEFEPLSTEIGELENLKMLHFRD 235

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           N L  +P +I KL  L  + L  N L  +P   G+L  L  L L +N+L+ LP +I  L
Sbjct: 236 NKLKSLPAKIGKLKNLETIYLNNNELESLPSEIGELRNLRYLDLRNNKLKVLPDTIRKL 294



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 52/144 (36%), Positives = 72/144 (50%), Gaps = 27/144 (18%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNF--------------PLSTLIA-------- 108
           FP    K TNL+ L L+ N++  LP  I                 PLST I         
Sbjct: 172 FPVVIGKLTNLQELHLNGNKLKSLPSEIRTLKNLEILYLNDNEFEPLSTEIGELENLKML 231

Query: 109 --RNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPR 166
             R+N L  +SLP  +  LKNL+   L+ N+LE  P +I ++  L+YL L NN L  +P 
Sbjct: 232 HFRDNKL--KSLPAKIGKLKNLETIYLNNNELESLPSEIGELRNLRYLDLRNNKLKVLPD 289

Query: 167 EINKL-CKLHVLSLGGNSLTDIPD 189
            I KL   LH+L L GNS+++I +
Sbjct: 290 TIRKLFSSLHLLYLTGNSISEIGE 313



 Score = 58.2 bits (139), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/98 (46%), Positives = 56/98 (57%), Gaps = 4/98 (4%)

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            +T I      L +LE L LS N+LESLP  I  L  LK+L L+ N L TLP+EI  L  
Sbjct: 7   GITSIDSNIKRLVKLEKLDLSVNKLESLPPEIGRLVNLKTLDLNINNLETLPSEIGDLV- 65

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
               L+ L L+NN L TLP+EI  L  L +L L DN L
Sbjct: 66  ---NLQKLYLNNNNLETLPSEIGKLTNLQDLHLIDNNL 100


>gi|291240668|ref|XP_002740240.1| PREDICTED: ERBB2 interacting protein-like [Saccoglossus
           kowalevskii]
          Length = 1112

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/236 (36%), Positives = 124/236 (52%), Gaps = 14/236 (5%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LST-LIARNN 111
           K  N+ TL L  N+L   P++      L  L L+NN+I+HLP+ I     L T LI++N+
Sbjct: 96  KLRNLSTLCLERNSLKTLPNSICNLQQLERLYLNNNQISHLPECIGKLRNLETFLISKNS 155

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
           L+   S+P  + +L  L+ F    N+L   P  I  +  L  L++  NSL  +P  I  L
Sbjct: 156 LV---SIPDSIGDLNKLQDFQAHRNKLSSLPESIGKLQNLTKLWVSRNSLTSIPDSICDL 212

Query: 172 CKLHVLSLGGNSLTDIPD-----TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLH 226
            KL  L L  N+L+ +PD     +  DL++L  L L  N ++ LP  I  LK L+ L + 
Sbjct: 213 NKLQDLRLHTNNLSYLPDRIVPESICDLHKLHDLQLHGNNIQFLPKRIGQLKWLRKLRMS 272

Query: 227 NNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           +N L  LP  I    C   KL+ L LH NKL +LP++I  LK +  LS+  N + I
Sbjct: 273 SNSLTRLPHSI----CDLNKLEDLQLHMNKLSSLPSQIGKLKHVKNLSISGNSIKI 324



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/240 (35%), Positives = 115/240 (47%), Gaps = 28/240 (11%)

Query: 68  LSFFPDNA-SKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNL 125
           LS FP    + +T + ++DL  NRI  LP +I+    L  L   +N LT  SLP  +  L
Sbjct: 40  LSTFPGILLTTYTCVHNVDLKKNRIAKLPPSISTLKQLRMLHMNSNRLT--SLPGSICKL 97

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           +NL    L  N L+  P  I ++  L+ LYL NN ++H+P  I KL  L    +  NSL 
Sbjct: 98  RNLSTLCLERNSLKTLPNSICNLQQLERLYLNNNQISHLPECIGKLRNLETFLISKNSLV 157

Query: 186 DIPDTFGDLYQLE-----------------------ALILSDNQLESLPASISNLKMLKS 222
            IPD+ GDL +L+                        L +S N L S+P SI +L  L+ 
Sbjct: 158 SIPDSIGDLNKLQDFQAHRNKLSSLPESIGKLQNLTKLWVSRNSLTSIPDSICDLNKLQD 217

Query: 223 LLLHNNKLRTLPTEIITLK-CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L LH N L  LP  I+    C   KL  L LH N ++ LP  I  LK L +L +  N L 
Sbjct: 218 LRLHTNNLSYLPDRIVPESICDLHKLHDLQLHGNNIQFLPKRIGQLKWLRKLRMSSNSLT 277



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 81/235 (34%), Positives = 120/235 (51%), Gaps = 7/235 (2%)

Query: 48  NNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL 106
           NN   +    I  L L+ N+LS+ P++      L+ L +S N    LP +I +   L+ L
Sbjct: 374 NNGTIRNCSQIQDLQLHKNSLSYLPEDIGSLHGLKKLSVSGNLFKSLPSSIGHLTWLTRL 433

Query: 107 IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPR 166
            A +N +T   LP+ +  L++LK   +  N L   P  I  +  L+ L +  N+L+ +P 
Sbjct: 434 YAHDNQITL--LPESIGGLQDLKTMWVQENSLVSIPHNIGHLHQLEDLRIHKNNLSSLPD 491

Query: 167 EINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLH 226
            +  L  L  L    N LT IPD+  +L++L+ L L  N L  LP +I  +  LK+L ++
Sbjct: 492 SVGDLTNLTTLWASNNKLTSIPDSVCELHELQHLQLDTNSLTFLPTNIGKISWLKTLCVN 551

Query: 227 NNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           NN L TLP  I  L  L EKL    + NN+L  LP  I  LK L+ L +  N LV
Sbjct: 552 NNSLTTLPDRIGNLHTL-EKLH---VANNQLSQLPESIRKLKNLTTLVVSKNALV 602



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 119/229 (51%), Gaps = 5/229 (2%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLL 113
           K +N+  L +  N+L+  PD+      L+ L L  N +++LP  I    +  L   ++L 
Sbjct: 188 KLQNLTKLWVSRNSLTSIPDSICDLNKLQDLRLHTNNLSYLPDRIVPESICDLHKLHDLQ 247

Query: 114 ----TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREIN 169
                 + LPK +  LK L+   +S N L + P  I D+  L+ L L  N L+ +P +I 
Sbjct: 248 LHGNNIQFLPKRIGQLKWLRKLRMSSNSLTRLPHSICDLNKLEDLQLHMNKLSSLPSQIG 307

Query: 170 KLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           KL  +  LS+ GNS+  +PD+ GDL QL  L    NQ+  LP SI  L+ L ++ +  N 
Sbjct: 308 KLKHVKNLSISGNSIKILPDSIGDLQQLTRLYAHGNQISHLPESIWELRNLTTMWISRNS 367

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           L T+     T++  S+ ++ L LH N L  LP +I +L  L +LS+  N
Sbjct: 368 LVTVSINNGTIRNCSQ-IQDLQLHKNSLSYLPEDIGSLHGLKKLSVSGN 415



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 119/253 (47%), Gaps = 29/253 (11%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNN 111
           K +++  L +  N++   PD+      L  L    N+I+HLP++I     L+T+ I+RN+
Sbjct: 308 KLKHVKNLSISGNSIKILPDSIGDLQQLTRLYAHGNQISHLPESIWELRNLTTMWISRNS 367

Query: 112 LLTAE-----------------------SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDI 148
           L+T                          LP+D+ +L  LK  ++SGN  +  P  I  +
Sbjct: 368 LVTVSINNGTIRNCSQIQDLQLHKNSLSYLPEDIGSLHGLKKLSVSGNLFKSLPSSIGHL 427

Query: 149 PTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLE 208
             L  LY  +N +  +P  I  L  L  + +  NSL  IP   G L+QLE L +  N L 
Sbjct: 428 TWLTRLYAHDNQITLLPESIGGLQDLKTMWVQENSLVSIPHNIGHLHQLEDLRIHKNNLS 487

Query: 209 SLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLK 268
           SLP S+ +L  L +L   NNKL ++P  +    C   +L+ L L  N L  LPT I  + 
Sbjct: 488 SLPDSVGDLTNLTTLWASNNKLTSIPDSV----CELHELQHLQLDTNSLTFLPTNIGKIS 543

Query: 269 CLSELSLRDNPLV 281
            L  L + +N L 
Sbjct: 544 WLKTLCVNNNSLT 556



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 117/224 (52%), Gaps = 14/224 (6%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTAESL 118
           L  + N ++  P++     +L+++ +  N +  +P  I +   L  L I +NNL    SL
Sbjct: 433 LYAHDNQITLLPESIGGLQDLKTMWVQENSLVSIPHNIGHLHQLEDLRIHKNNL---SSL 489

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P  + +L NL     S N+L   P  + ++  L++L L  NSL  +P  I K+  L  L 
Sbjct: 490 PDSVGDLTNLTTLWASNNKLTSIPDSVCELHELQHLQLDTNSLTFLPTNIGKISWLKTLC 549

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           +  NSLT +PD  G+L+ LE L +++NQL  LP SI  LK L +L++  N L ++P    
Sbjct: 550 VNNNSLTTLPDRIGNLHTLEKLHVANNQLSQLPESIRKLKNLTTLVVSKNALVSMPN--- 606

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS----ELSLRDN 278
                  KL+     NN+L++LP  I TL+ L     ++ ++DN
Sbjct: 607 --MSYLHKLEQFRFENNELQSLPRGIDTLRHLHTIKFDVDIKDN 648



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 124/244 (50%), Gaps = 37/244 (15%)

Query: 63   LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
            L  N L+  P++ +    L  L+++NN++  LP+++     L  L+A+NN L  ++LP +
Sbjct: 853  LQSNYLTTLPEDINYSQKLYYLNINNNKLKCLPESLCELTNLKQLLAKNNEL--DTLPDN 910

Query: 122  MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG- 180
               L  L+  N+S N+++  P  I  +  L  L   NNS++ +P +I KL KL  L LG 
Sbjct: 911  FGELSKLEYLNISNNKVKSLPESIGKLENLTQLCANNNSISELP-DIRKLKKLTALYLGN 969

Query: 181  ---------------------------GNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
                                       GNSLT +P++   L  LE L++ +N+LESLP  
Sbjct: 970  NNKTRPNSKFSECISNLPITLKTLWMFGNSLTSLPESISTLRNLEELMIQENKLESLPDE 1029

Query: 214  ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            I  L  L  L +HNN L++LP +I +LK    +L+ L L +NKL  LP  I  LK L  +
Sbjct: 1030 IGKLGSLTKLWVHNNLLKSLP-DISSLK----QLQDLSLTDNKLEKLPEGIGNLKSLRSI 1084

Query: 274  SLRD 277
               D
Sbjct: 1085 RFND 1088



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 79/231 (34%), Positives = 120/231 (51%), Gaps = 16/231 (6%)

Query: 56   ENIDTLLLYHNNLSFFPDNA-SKFTNLRSLDLSNNRITHLPQAIT-NFPLSTLIARNNLL 113
            EN    +   ++L  FP+     F  +R +DL +N +T LP+ I  +  L  L   NN L
Sbjct: 822  ENEKEYIAVKSDLKEFPEKLLENFQRVRKVDLQSNYLTTLPEDINYSQKLYYLNINNNKL 881

Query: 114  TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
              + LP+ +  L NLK      N+L+  P    ++  L+YL + NN +  +P  I KL  
Sbjct: 882  --KCLPESLCELTNLKQLLAKNNELDTLPDNFGELSKLEYLNISNNKVKSLPESIGKLEN 939

Query: 174  LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS-----ISNLKM-LKSLLLHN 227
            L  L    NS++++PD    L +L AL L +N  ++ P S     ISNL + LK+L +  
Sbjct: 940  LTQLCANNNSISELPD-IRKLKKLTALYLGNNN-KTRPNSKFSECISNLPITLKTLWMFG 997

Query: 228  NKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            N L +LP  I TL+ L E    L++  NKL +LP EI  L  L++L + +N
Sbjct: 998  NSLTSLPESISTLRNLEE----LMIQENKLESLPDEIGKLGSLTKLWVHNN 1044



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 90/185 (48%), Gaps = 25/185 (13%)

Query: 120  KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            K + N + ++  +L  N L   P  I     L YL + NN L  +P  + +L  L  L  
Sbjct: 840  KLLENFQRVRKVDLQSNYLTTLPEDINYSQKLYYLNINNNKLKCLPESLCELTNLKQLLA 899

Query: 180  GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
              N L  +PD FG+L +LE L +S+N+++SLP SI  L+ L  L  +NN +  LP +I  
Sbjct: 900  KNNELDTLPDNFGELSKLEYLNISNNKVKSLPESIGKLENLTQLCANNNSISELP-DIRK 958

Query: 240  LK---------------------CLSE---KLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            LK                     C+S     LK+L +  N L +LP  I TL+ L EL +
Sbjct: 959  LKKLTALYLGNNNKTRPNSKFSECISNLPITLKTLWMFGNSLTSLPESISTLRNLEELMI 1018

Query: 276  RDNPL 280
            ++N L
Sbjct: 1019 QENKL 1023



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/188 (34%), Positives = 91/188 (48%), Gaps = 10/188 (5%)

Query: 45   LLPNNDYNKKPEN------IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI 98
            L  NN+ +  P+N      ++ L + +N +   P++  K  NL  L  +NN I+ LP   
Sbjct: 898  LAKNNELDTLPDNFGELSKLEYLNISNNKVKSLPESIGKLENLTQLCANNNSISELPDIR 957

Query: 99   TNFPLSTLIARNNLLTA--ESLPKDMSNLK-NLKVFNLSGNQLEQFPIQILDIPTLKYLY 155
                L+ L   NN  T       + +SNL   LK   + GN L   P  I  +  L+ L 
Sbjct: 958  KLKKLTALYLGNNNKTRPNSKFSECISNLPITLKTLWMFGNSLTSLPESISTLRNLEELM 1017

Query: 156  LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
            +  N L  +P EI KL  L  L +  N L  +PD    L QL+ L L+DN+LE LP  I 
Sbjct: 1018 IQENKLESLPDEIGKLGSLTKLWVHNNLLKSLPD-ISSLKQLQDLSLTDNKLEKLPEGIG 1076

Query: 216  NLKMLKSL 223
            NLK L+S+
Sbjct: 1077 NLKSLRSI 1084


>gi|124002734|ref|ZP_01687586.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991962|gb|EAY31349.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 500

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 73/204 (35%), Positives = 119/204 (58%), Gaps = 7/204 (3%)

Query: 76  SKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLS 134
            K+ NL+SLD+S NR+T +P  + +   L++L  + N LT   LP+ +  L  L+   L+
Sbjct: 190 GKYKNLQSLDISRNRLTKIPDNLGSLKKLTSLFLQQNNLT--KLPEKIGALSQLRRLYLN 247

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
            N+++Q P ++  +  L+ + L +N L  +P +I KL +L VLSL  N L  +P++ G+L
Sbjct: 248 ENKIKQLPKELTSLVQLQVVKLEHNQLLELPNDIGKLSQLKVLSLHHNLLRALPESIGNL 307

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
             L  L LS+N+LE LP+S+ N+  LKS+ +  N L+TLP  I  LK    K++ +    
Sbjct: 308 TLLPTLQLSNNRLELLPSSLGNMASLKSIWVRKNNLQTLPKSISQLK----KIERIYASQ 363

Query: 255 NKLRTLPTEIITLKCLSELSLRDN 278
           N++  LP E+  L  L  L++  N
Sbjct: 364 NQISLLPVELAELTQLKSLAISGN 387



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/257 (33%), Positives = 116/257 (45%), Gaps = 43/257 (16%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLL--------- 113
           +N L+ FP    +   L+ L L NN I HLPQ I +   L  L I RN+L+         
Sbjct: 66  NNQLTVFPKVLFQLKKLKILRLYNNNIKHLPQGIDSLKSLEVLDIQRNSLVDLPGKIVRL 125

Query: 114 -----------TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLN 162
                        + LP+++  LK ++VF   GNQL+Q P     +  L+ L LG N L 
Sbjct: 126 RNLTQLNIANNKVKELPENIGKLKKMRVFEAYGNQLKQLPASFSSLRKLESLGLGKNQLE 185

Query: 163 HVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKS 222
            V   + K   L  L +  N LT IPD  G L +L +L L  N L  LP  I  L  L+ 
Sbjct: 186 SV--SLGKYKNLQSLDISRNRLTKIPDNLGSLKKLTSLFLQQNNLTKLPEKIGALSQLRR 243

Query: 223 LLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTE 263
           L L+ NK++ LP E+ +L  L                     +LK L LH+N LR LP  
Sbjct: 244 LYLNENKIKQLPKELTSLVQLQVVKLEHNQLLELPNDIGKLSQLKVLSLHHNLLRALPES 303

Query: 264 IITLKCLSELSLRDNPL 280
           I  L  L  L L +N L
Sbjct: 304 IGNLTLLPTLQLSNNRL 320



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/188 (36%), Positives = 104/188 (55%), Gaps = 6/188 (3%)

Query: 49  NDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTL 106
           ND  K  + +  L L+HN L   P++    T L +L LSNNR+  LP ++ N     S  
Sbjct: 279 NDIGKLSQ-LKVLSLHHNLLRALPESIGNLTLLPTLQLSNNRLELLPSSLGNMASLKSIW 337

Query: 107 IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPR 166
           + +NNL   ++LPK +S LK ++    S NQ+   P+++ ++  LK L +  N L  +P 
Sbjct: 338 VRKNNL---QTLPKSISQLKKIERIYASQNQISLLPVELAELTQLKSLAISGNLLTEIPS 394

Query: 167 EINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLH 226
           E+  L +L+ L    N +T +P+   DL  L  L+LS N+L +LP  I+ LK L+ L L 
Sbjct: 395 ELWGLEELYYLDASRNQITSLPNKISDLRSLRILVLSHNRLRTLPFGITRLKNLRELYLD 454

Query: 227 NNKLRTLP 234
           NN+L  LP
Sbjct: 455 NNQLAKLP 462



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 86/289 (29%), Positives = 134/289 (46%), Gaps = 34/289 (11%)

Query: 24  IKTLDFSYSSLDSETLATQIEL----LPNNDYNKKPENIDTL------LLYHNNLSFFPD 73
           +++L    + L+S +L     L    +  N   K P+N+ +L       L  NNL+  P+
Sbjct: 174 LESLGLGKNQLESVSLGKYKNLQSLDISRNRLTKIPDNLGSLKKLTSLFLQQNNLTKLPE 233

Query: 74  NASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIA--RNNLLTAESLPKDMSNLKNLKVF 131
                + LR L L+ N+I  LP+ +T+     ++    N LL    LP D+  L  LKV 
Sbjct: 234 KIGALSQLRRLYLNENKIKQLPKELTSLVQLQVVKLEHNQLL---ELPNDIGKLSQLKVL 290

Query: 132 NLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTF 191
           +L  N L   P  I ++  L  L L NN L  +P  +  +  L  + +  N+L  +P + 
Sbjct: 291 SLHHNLLRALPESIGNLTLLPTLQLSNNRLELLPSSLGNMASLKSIWVRKNNLQTLPKSI 350

Query: 192 GDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS------- 244
             L ++E +  S NQ+  LP  ++ L  LKSL +  N L  +P+E+  L+ L        
Sbjct: 351 SQLKKIERIYASQNQISLLPVELAELTQLKSLAISGNLLTEIPSELWGLEELYYLDASRN 410

Query: 245 ------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                         L+ L+L +N+LRTLP  I  LK L EL L +N L 
Sbjct: 411 QITSLPNKISDLRSLRILVLSHNRLRTLPFGITRLKNLRELYLDNNQLA 459



 Score = 61.6 bits (148), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 41/132 (31%), Positives = 68/132 (51%), Gaps = 3/132 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           + I+ +    N +S  P   ++ T L+SL +S N +T +P  +     L  L A  N +T
Sbjct: 354 KKIERIYASQNQISLLPVELAELTQLKSLAISGNLLTEIPSELWGLEELYYLDASRNQIT 413

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLP  +S+L++L++  LS N+L   P  I  +  L+ LYL NN L  +P  +  L  L
Sbjct: 414 --SLPNKISDLRSLRILVLSHNRLRTLPFGITRLKNLRELYLDNNQLAKLPPNMGALLNL 471

Query: 175 HVLSLGGNSLTD 186
            + ++  N  T+
Sbjct: 472 KIFTMKRNGFTN 483


>gi|260788696|ref|XP_002589385.1| hypothetical protein BRAFLDRAFT_77827 [Branchiostoma floridae]
 gi|229274562|gb|EEN45396.1| hypothetical protein BRAFLDRAFT_77827 [Branchiostoma floridae]
          Length = 843

 Score =  105 bits (263), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 138/291 (47%), Gaps = 23/291 (7%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L +Y N LS FP    K   LR L +++N++T LPQ +     L  LIA  N +  
Sbjct: 198 NLEALNVYTNKLSTFPPGVEKLQKLRLLGIADNKLTELPQGVCLLSNLEILIANRNPIA- 256

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP D++ LK LK  ++   Q ++FP Q+L + TL+ LY G    + VP E+  L  L 
Sbjct: 257 -HLPDDVTRLKRLKTLDVPCCQFDEFPRQVLQLKTLEKLYAGGCKFDIVPDEVGDLQHLW 315

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            LSL  N L  +P T   L+ L  + L +N+ ++ P  +  L  ++ L + NN +  LP 
Sbjct: 316 FLSLPNNLLRTLPSTLNHLHNLRQVHLWNNKFDTFPEVLCELPAMEKLDIRNNNITRLPI 375

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI------ITLKCLSELSLRDNPLVIRF----- 284
            +      ++KLK L +  N L   P ++        +  L + + +D  ++  F     
Sbjct: 376 ALHR----ADKLKDLDVSGNPLTYPPRDVCKQGTGAIMAFLKQEAEKDERILRAFNRLSV 431

Query: 285 -VSDMTYKP-PSLLELASRTL---KVHEIDYSQEHLPQNLVQYLESAHHCV 330
            +S   +KP    L L++R +   K    D   + + Q LVQ+   A    
Sbjct: 432 RMSQTQWKPLARSLGLSNRAMDAIKASAPDDVPDQVYQTLVQWRAKAGEAA 482



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 74/233 (31%), Positives = 125/233 (53%), Gaps = 10/233 (4%)

Query: 52  NKKPENIDTLL---LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLI 107
           N +P+ ++  L   L +  L+  P+     T+L  LD+S N++T +P+AI     L  L 
Sbjct: 6   NLQPQTVNGRLELDLSNQGLTSIPEEVFDITDLEVLDVSRNKLTSIPEAIGRLQKLYRLD 65

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE 167
           A +N+LT  SLP+ + +L+ L    +  NQL + P  +  +P L+ L +G   L+  P  
Sbjct: 66  AYSNMLT--SLPQAIGSLQKLTHLYIYDNQLTEVPSGVCSLPNLEVLSVGKTKLSTFPPG 123

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
             KL KL  L +G N LT++P     L  LE L +++N+L + P  +  L+ L+ L + +
Sbjct: 124 AEKLQKLRELDIGDNQLTEVPSGVCSLPNLEVLDVNNNKLSTFPPGVEKLQKLRVLDIGD 183

Query: 228 NKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           N+L  +P+ + +L      L++L ++ NKL T P  +  L+ L  L + DN L
Sbjct: 184 NQLTEVPSGVCSLP----NLEALNVYTNKLSTFPPGVEKLQKLRLLGIADNKL 232



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 116/223 (52%), Gaps = 7/223 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L +    LS FP  A K   LR LD+ +N++T +P  + + P L  L   NN L+ 
Sbjct: 106 NLEVLSVGKTKLSTFPPGAEKLQKLRELDIGDNQLTEVPSGVCSLPNLEVLDVNNNKLS- 164

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            + P  +  L+ L+V ++  NQL + P  +  +P L+ L +  N L+  P  + KL KL 
Sbjct: 165 -TFPPGVEKLQKLRVLDIGDNQLTEVPSGVCSLPNLEALNVYTNKLSTFPPGVEKLQKLR 223

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT++P     L  LE LI + N +  LP  ++ LK LK+L +   +    P 
Sbjct: 224 LLGIADNKLTELPQGVCLLSNLEILIANRNPIAHLPDDVTRLKRLKTLDVPCCQFDEFPR 283

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           +++ LK L EKL +      K   +P E+  L+ L  LSL +N
Sbjct: 284 QVLQLKTL-EKLYA---GGCKFDIVPDEVGDLQHLWFLSLPNN 322



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 79/271 (29%), Positives = 125/271 (46%), Gaps = 33/271 (12%)

Query: 34  LDSETLATQIEL-LPNNDYNKKPENI------DTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           L  +T+  ++EL L N      PE +      + L +  N L+  P+   +   L  LD 
Sbjct: 7   LQPQTVNGRLELDLSNQGLTSIPEEVFDITDLEVLDVSRNKLTSIPEAIGRLQKLYRLDA 66

Query: 87  SNNRITHLPQAITNF-PLSTLIARNNLLTA---------------------ESLPKDMSN 124
            +N +T LPQAI +   L+ L   +N LT                       + P     
Sbjct: 67  YSNMLTSLPQAIGSLQKLTHLYIYDNQLTEVPSGVCSLPNLEVLSVGKTKLSTFPPGAEK 126

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ L+  ++  NQL + P  +  +P L+ L + NN L+  P  + KL KL VL +G N L
Sbjct: 127 LQKLRELDIGDNQLTEVPSGVCSLPNLEVLDVNNNKLSTFPPGVEKLQKLRVLDIGDNQL 186

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T++P     L  LEAL +  N+L + P  +  L+ L+ L + +NKL  LP  +    CL 
Sbjct: 187 TEVPSGVCSLPNLEALNVYTNKLSTFPPGVEKLQKLRLLGIADNKLTELPQGV----CLL 242

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
             L+ L+ + N +  LP ++  LK L  L +
Sbjct: 243 SNLEILIANRNPIAHLPDDVTRLKRLKTLDV 273


>gi|147903968|ref|NP_001088252.1| uncharacterized protein LOC495083 [Xenopus laevis]
 gi|54038577|gb|AAH84248.1| LOC495083 protein [Xenopus laevis]
          Length = 524

 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 121/223 (54%), Gaps = 9/223 (4%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-F 101
           +++LP N  N    N+ +L L  N L+F P++ ++   L  LD+ NN +  LP+ I + +
Sbjct: 140 LQVLPENIGNLS--NLVSLELRENLLTFLPESLAQLHRLEELDVGNNELYDLPETIGSLY 197

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L  L    N L    LP ++ NLKNL   +LS N+LE+ P +I  + +L  L + +NS+
Sbjct: 198 KLKDLWLDGNQLA--DLPPEIGNLKNLLCLDLSENKLERLPEEISGLKSLTDLLVSHNSI 255

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +P  I KL  L +L +  N L  + D  G+   L  +IL++NQL  LP SI  LK L 
Sbjct: 256 EVLPDGIGKLKNLSILKVDQNRLMQLTDCIGECESLTEVILTENQLLVLPRSIGKLKKLC 315

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           +L +  NKL +LP EI    C S  L    +  N+L  LP+EI
Sbjct: 316 NLNIDRNKLMSLPNEIGG--CCS--LNVFCVRENRLSRLPSEI 354



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 92/249 (36%), Positives = 124/249 (49%), Gaps = 32/249 (12%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTA 115
           ++ LLL  N L   P    +   LR L LS+N I  LP  I NF  L  L ++RN +   
Sbjct: 38  LEELLLDANQLRELPKQFFQLVQLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNEI--- 94

Query: 116 ESLPKDMSNLKNLKVFNLSGNQL----EQFP--------------IQIL-----DIPTLK 152
             +P+ +S  K L+V + SGN L    E FP              +Q+L     ++  L 
Sbjct: 95  PEIPESISFCKALQVADFSGNPLTRLPESFPDLSSLICLSINDISLQVLPENIGNLSNLV 154

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            L L  N L  +P  + +L +L  L +G N L D+P+T G LY+L+ L L  NQL  LP 
Sbjct: 155 SLELRENLLTFLPESLAQLHRLEELDVGNNELYDLPETIGSLYKLKDLWLDGNQLADLPP 214

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSE 272
            I NLK L  L L  NKL  LP EI  LK L++    LL+ +N +  LP  I  LK LS 
Sbjct: 215 EIGNLKNLLCLDLSENKLERLPEEISGLKSLTD----LLVSHNSIEVLPDGIGKLKNLSI 270

Query: 273 LSLRDNPLV 281
           L +  N L+
Sbjct: 271 LKVDQNRLM 279



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 90/263 (34%), Positives = 127/263 (48%), Gaps = 30/263 (11%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      L  N +   P++ S    L+  D S N +T LP++  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDLSRNEIPEIPESISFCKALQVADFSGNPLTRLPES-- 123

Query: 100 NFP-LSTLIARN-NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
            FP LS+LI  + N ++ + LP+++ NL NL    L  N L   P  +  +  L+ L +G
Sbjct: 124 -FPDLSSLICLSINDISLQVLPENIGNLSNLVSLELRENLLTFLPESLAQLHRLEELDVG 182

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           NN L  +P  I  L KL  L L GN L D+P   G+L  L  L LS+N+LE LP  IS L
Sbjct: 183 NNELYDLPETIGSLYKLKDLWLDGNQLADLPPEIGNLKNLLCLDLSENKLERLPEEISGL 242

Query: 218 KMLKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLR 258
           K L  LL+ +N +  LP  I  LK LS                   E L  ++L  N+L 
Sbjct: 243 KSLTDLLVSHNSIEVLPDGIGKLKNLSILKVDQNRLMQLTDCIGECESLTEVILTENQLL 302

Query: 259 TLPTEIITLKCLSELSLRDNPLV 281
            LP  I  LK L  L++  N L+
Sbjct: 303 VLPRSIGKLKKLCNLNIDRNKLM 325



 Score = 38.1 bits (87), Expect = 7.8,   Method: Compositional matrix adjust.
 Identities = 18/54 (33%), Positives = 30/54 (55%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNN 111
           ++   +  N LS  P   ++ T L  LD++ NR+THLP ++T+  L  L   +N
Sbjct: 337 LNVFCVRENRLSRLPSEIAQATELHVLDVAGNRLTHLPLSLTSLKLKALWLSDN 390


>gi|440802335|gb|ELR23264.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 845

 Score =  105 bits (262), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 84/246 (34%), Positives = 126/246 (51%), Gaps = 27/246 (10%)

Query: 60  TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE--S 117
           TL    NNL    DN S+   L +L+LS+N++T LP+ I      T++   NL   +   
Sbjct: 246 TLDFRDNNLCDLADNISQLCELATLNLSHNKLTTLPRQIGEM---TVLMELNLSKNKIAH 302

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LP ++ +L  L    LS N L   PI++ +I  ++ L L NN L+ +P EI KL KL  L
Sbjct: 303 LPPELGHLSFLGKLYLSRNALATLPIELSNIAFIQELDLSNNGLDDLPIEIFKLDKLQTL 362

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            L  N+LT +P   G L++L+ L +S+NQL +LPA IS L  L+ L ++ N ++ LP  +
Sbjct: 363 KLDCNNLTHLPPELGHLFRLQHLYVSNNQLTTLPAEISQLSRLQVLSIYQNAIKQLPDGM 422

Query: 238 ITLK-----CLSE-----------------KLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
             LK     CL +                  L+ L+L  N+L ++P  +  L  L EL L
Sbjct: 423 GALKHIESICLGDNLLDESGLAALEKATMPALEQLVLSGNRLTSIPEGLCNLASLKELYL 482

Query: 276 RDNPLV 281
             N + 
Sbjct: 483 SRNEIA 488



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/264 (31%), Positives = 116/264 (43%), Gaps = 39/264 (14%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L  NNL   P    K   L+SLD+ NNR+  LP    +   L+ L   NNL + 
Sbjct: 127 NLTVLDLSTNNLKQLPPEVGKLHALKSLDIDNNRLKTLPPEFGDLGSLTQLTCANNLFS- 185

Query: 116 ESLPKDMSNLKNLKVFN------------------------LSGNQLEQFPIQILDIPTL 151
              P+ +  L  LK  N                        LSGN+   FP  +    +L
Sbjct: 186 -HFPESICRLGFLKTLNISCNRITQLPDAIAQLGDSITELDLSGNRFVTFPESLAGCRSL 244

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
             L   +N+L  +   I++LC+L  L+L  N LT +P   G++  L  L LS N++  LP
Sbjct: 245 ITLDFRDNNLCDLADNISQLCELATLNLSHNKLTTLPRQIGEMTVLMELNLSKNKIAHLP 304

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             + +L  L  L L  N L TLP E+  +  + E    L L NN L  LP EI  L  L 
Sbjct: 305 PELGHLSFLGKLYLSRNALATLPIELSNIAFIQE----LDLSNNGLDDLPIEIFKLDKLQ 360

Query: 272 ELSLRDNPLVIRFVSDMTYKPPSL 295
            L L  N        ++T+ PP L
Sbjct: 361 TLKLDCN--------NLTHLPPEL 376



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 103/243 (42%), Gaps = 35/243 (14%)

Query: 60  TLLLYHNNLSFFPD-NASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAES 117
           +L +  N L+  P   +     L  LD+  NR+  LP ++ +   L  LIA  NLL  E 
Sbjct: 60  SLRINGNKLTGLPSLGSGALKELEVLDVGKNRLRSLPGSVGDLSALVRLIAHCNLL--ED 117

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LP  +  L NL V +LS N L+Q                       +P E+ KL  L  L
Sbjct: 118 LPPGVGELANLTVLDLSTNNLKQ-----------------------LPPEVGKLHALKSL 154

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            +  N L  +P  FGDL  L  L  ++N     P SI  L  LK+L +  N++  LP  I
Sbjct: 155 DIDNNRLKTLPPEFGDLGSLTQLTCANNLFSHFPESICRLGFLKTLNISCNRITQLPDAI 214

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLE 297
                L + +  L L  N+  T P  +   + L  L  RDN L      D+      L E
Sbjct: 215 AQ---LGDSITELDLSGNRFVTFPESLAGCRSLITLDFRDNNLC-----DLADNISQLCE 266

Query: 298 LAS 300
           LA+
Sbjct: 267 LAT 269



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 118/262 (45%), Gaps = 13/262 (4%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L + +N L+  P   S+ + L+ L +  N I  LP  +     + ++   +NLL    L 
Sbjct: 385 LYVSNNQLTTLPAEISQLSRLQVLSIYQNAIKQLPDGMGALKHIESICLGDNLLDESGLA 444

Query: 120 K-DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
             + + +  L+   LSGN+L   P  + ++ +LK LYL  N +  +P  I +L K+ +  
Sbjct: 445 ALEKATMPALEQLVLSGNRLTSIPEGLCNLASLKELYLSRNEIAELPEAITRLNKIRIFD 504

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           L  N++  +P     L+ L  + LS N+L SLP     L  L  L L +N L  LP ++ 
Sbjct: 505 LSDNAIAALPSFISSLHSLREINLSYNRLSSLPPEFVKLTNLCVLYLMHNNLTDLPEDLQ 564

Query: 239 TLK---CLSEKLK-------SLLLHNNKLRTLPTEIITLKCLSELSL-RDNPLVIRFVSD 287
            ++   C    L+       +LLL   K +        LK    L+  +D    +  +S+
Sbjct: 565 AMRYRNCYHMDLEDNLIPDLALLLGQTKRKKRKRATSKLKDADRLTKSKDEKSRVAGISE 624

Query: 288 MTYKPPSLLELASRTLKVHEID 309
           M  K PS+ +  S  L    ID
Sbjct: 625 MMGKRPSMEDTVSTHLAFSGID 646


>gi|456888996|gb|EMF99923.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200701203]
          Length = 347

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 127/246 (51%), Gaps = 32/246 (13%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQA-ITNFPLSTLIARNNLLT 114
           +N+ TL LY N LS  P+   K  NL+ L+LS N+++ LP A + N  +  L  RN   T
Sbjct: 86  QNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQLSVLPIAQLQNLEILELF-RNQFTT 144

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG----------------- 157
              LPK+++ LKNL++ NL  N+++  P +I  +  L +L LG                 
Sbjct: 145 ---LPKEITELKNLQILNLFENKIKILPKEISQLSNLIWLDLGKNKIERLSLDFKGFQNL 201

Query: 158 ------NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
                 +N L H+  +I +L  L  L+L  N    +P+    L  L+ L L+ NQL SLP
Sbjct: 202 KSLNLLDNKLEHLSADIAQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLP 261

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             I  L+ L+SL +  N+L TLP  I  L+     LK L L  N+L TLP E+  L+ L 
Sbjct: 262 EEIGKLEKLESLFVEGNRLTTLPNGIGHLR----NLKILHLEQNRLTTLPEEMRALQNLK 317

Query: 272 ELSLRD 277
           EL L++
Sbjct: 318 ELYLQN 323



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 139/300 (46%), Gaps = 54/300 (18%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
            ++ LD S   L  ETL  +I            +N++ L+L+ N L+  P    K  NL 
Sbjct: 18  EVRILDLSSQEL--ETLPEEIGTF---------QNLEKLILFRNRLTAIPKEIGKLRNLE 66

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           +L L+ NR+  +P  I     L TL    N L+  +LP  +  L+NLK  NLSGNQL   
Sbjct: 67  TLILAENRLKTIPNEIEQLQNLKTLDLYENKLS--NLPNGIGKLENLKELNLSGNQLSVL 124

Query: 142 PI---------------------QILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
           PI                     +I ++  L+ L L  N +  +P+EI++L  L  L LG
Sbjct: 125 PIAQLQNLEILELFRNQFTTLPKEITELKNLQILNLFENKIKILPKEISQLSNLIWLDLG 184

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
            N +  +   F     L++L L DN+LE L A I+ LK L+ L L+ N+ + LP EI+ L
Sbjct: 185 KNKIERLSLDFKGFQNLKSLNLLDNKLEHLSADIAQLKSLEFLNLNYNRFKILPEEILQL 244

Query: 241 KCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           + L                    EKL+SL +  N+L TLP  I  L+ L  L L  N L 
Sbjct: 245 ENLQVLELTGNQLTSLPEEIGKLEKLESLFVEGNRLTTLPNGIGHLRNLKILHLEQNRLT 304



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 89/238 (37%), Positives = 119/238 (50%), Gaps = 27/238 (11%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
           HNNL     N S+   +R LDLS+  +  LP+ I  F  L  LI   N LTA  +PK++ 
Sbjct: 6   HNNLEKSLQNPSE---VRILDLSSQELETLPEEIGTFQNLEKLILFRNRLTA--IPKEIG 60

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            L+NL+   L+ N+L+  P +I  +  LK L L  N L+++P  I KL  L  L+L GN 
Sbjct: 61  KLRNLETLILAENRLKTIPNEIEQLQNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQ 120

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           L+ +P     L  LE L L  NQ  +LP  I+ LK L+ L L  NK++ LP EI  L  L
Sbjct: 121 LSVLP--IAQLQNLEILELFRNQFTTLPKEITELKNLQILNLFENKIKILPKEISQLSNL 178

Query: 244 S-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
                               + LKSL L +NKL  L  +I  LK L  L+L  N   I
Sbjct: 179 IWLDLGKNKIERLSLDFKGFQNLKSLNLLDNKLEHLSADIAQLKSLEFLNLNYNRFKI 236



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 86/169 (50%), Gaps = 6/169 (3%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +L K + N   +++ +LS  +LE  P +I     L+ L L  N L  +P+EI KL  
Sbjct: 5   THNNLEKSLQNPSEVRILDLSSQELETLPEEIGTFQNLEKLILFRNRLTAIPKEIGKLRN 64

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L  IP+    L  L+ L L +N+L +LP  I  L+ LK L L  N+L  L
Sbjct: 65  LETLILAENRLKTIPNEIEQLQNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQLSVL 124

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P   +      + L+ L L  N+  TLP EI  LK L  L+L +N + I
Sbjct: 125 PIAQL------QNLEILELFRNQFTTLPKEITELKNLQILNLFENKIKI 167



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 71/127 (55%), Gaps = 4/127 (3%)

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
           N++ + +    ++ +L L    L  +P+  G    LE LIL  N+L ++P  I  L+ L+
Sbjct: 7   NNLEKSLQNPSEVRILDLSSQELETLPEEIGTFQNLEKLILFRNRLTAIPKEIGKLRNLE 66

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +L+L  N+L+T+P EI  L    + LK+L L+ NKL  LP  I  L+ L EL+L  N L 
Sbjct: 67  TLILAENRLKTIPNEIEQL----QNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQLS 122

Query: 282 IRFVSDM 288
           +  ++ +
Sbjct: 123 VLPIAQL 129


>gi|418719131|ref|ZP_13278331.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|418738815|ref|ZP_13295208.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
 gi|421095752|ref|ZP_15556462.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410361414|gb|EKP12457.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200801926]
 gi|410744284|gb|EKQ93025.1| leucine rich repeat protein [Leptospira borgpetersenii str. UI
           09149]
 gi|410745513|gb|EKQ98423.1| leucine rich repeat protein [Leptospira borgpetersenii serovar
           Castellonis str. 200801910]
          Length = 344

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 87/246 (35%), Positives = 127/246 (51%), Gaps = 32/246 (13%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQA-ITNFPLSTLIARNNLLT 114
           +N+ TL LY N LS  P+   K  NL+ L+LS N+++ LP A + N  +  L  RN   T
Sbjct: 86  QNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQLSVLPIAQLQNLEILELF-RNQFTT 144

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG----------------- 157
              LPK+++ LKNL++ NL  N+++  P +I  +  L +L LG                 
Sbjct: 145 ---LPKEITELKNLQILNLFENKIKILPKEISQLSNLIWLDLGKNKIERLSLDFKGFQNL 201

Query: 158 ------NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
                 +N L H+  +I +L  L  L+L  N    +P+    L  L+ L L+ NQL SLP
Sbjct: 202 KSLNLLDNKLEHLSADIAQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLP 261

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             I  L+ L+SL +  N+L TLP  I  L+     LK L L  N+L TLP E+  L+ L 
Sbjct: 262 EEIGKLEKLESLFVEGNRLTTLPNGIGHLR----NLKILHLEQNRLTTLPEEMRALQNLK 317

Query: 272 ELSLRD 277
           EL L++
Sbjct: 318 ELYLQN 323



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 139/300 (46%), Gaps = 54/300 (18%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
            ++ LD S   L  ETL  +I            +N++ L+L+ N L+  P    K  NL 
Sbjct: 18  EVRILDLSSQEL--ETLPEEIGTF---------QNLEKLILFRNRLTAIPKEIGKLRNLE 66

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           +L L+ NR+  +P  I     L TL    N L+  +LP  +  L+NLK  NLSGNQL   
Sbjct: 67  TLILAENRLKTIPNEIEQLQNLKTLDLYENKLS--NLPNGIGKLENLKELNLSGNQLSVL 124

Query: 142 PI---------------------QILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
           PI                     +I ++  L+ L L  N +  +P+EI++L  L  L LG
Sbjct: 125 PIAQLQNLEILELFRNQFTTLPKEITELKNLQILNLFENKIKILPKEISQLSNLIWLDLG 184

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
            N +  +   F     L++L L DN+LE L A I+ LK L+ L L+ N+ + LP EI+ L
Sbjct: 185 KNKIERLSLDFKGFQNLKSLNLLDNKLEHLSADIAQLKSLEFLNLNYNRFKILPEEILQL 244

Query: 241 KCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           + L                    EKL+SL +  N+L TLP  I  L+ L  L L  N L 
Sbjct: 245 ENLQVLELTGNQLTSLPEEIGKLEKLESLFVEGNRLTTLPNGIGHLRNLKILHLEQNRLT 304



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 89/238 (37%), Positives = 119/238 (50%), Gaps = 27/238 (11%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
           HNNL     N S+   +R LDLS+  +  LP+ I  F  L  LI   N LTA  +PK++ 
Sbjct: 6   HNNLEKSLQNPSE---VRILDLSSQELETLPEEIGTFQNLEKLILFRNRLTA--IPKEIG 60

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            L+NL+   L+ N+L+  P +I  +  LK L L  N L+++P  I KL  L  L+L GN 
Sbjct: 61  KLRNLETLILAENRLKTIPNEIEQLQNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQ 120

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           L+ +P     L  LE L L  NQ  +LP  I+ LK L+ L L  NK++ LP EI  L  L
Sbjct: 121 LSVLP--IAQLQNLEILELFRNQFTTLPKEITELKNLQILNLFENKIKILPKEISQLSNL 178

Query: 244 S-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
                               + LKSL L +NKL  L  +I  LK L  L+L  N   I
Sbjct: 179 IWLDLGKNKIERLSLDFKGFQNLKSLNLLDNKLEHLSADIAQLKSLEFLNLNYNRFKI 236



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 61/169 (36%), Positives = 86/169 (50%), Gaps = 6/169 (3%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +L K + N   +++ +LS  +LE  P +I     L+ L L  N L  +P+EI KL  
Sbjct: 5   THNNLEKSLQNPSEVRILDLSSQELETLPEEIGTFQNLEKLILFRNRLTAIPKEIGKLRN 64

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L  IP+    L  L+ L L +N+L +LP  I  L+ LK L L  N+L  L
Sbjct: 65  LETLILAENRLKTIPNEIEQLQNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQLSVL 124

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P   +      + L+ L L  N+  TLP EI  LK L  L+L +N + I
Sbjct: 125 PIAQL------QNLEILELFRNQFTTLPKEITELKNLQILNLFENKIKI 167



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/127 (33%), Positives = 71/127 (55%), Gaps = 4/127 (3%)

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
           N++ + +    ++ +L L    L  +P+  G    LE LIL  N+L ++P  I  L+ L+
Sbjct: 7   NNLEKSLQNPSEVRILDLSSQELETLPEEIGTFQNLEKLILFRNRLTAIPKEIGKLRNLE 66

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +L+L  N+L+T+P EI  L    + LK+L L+ NKL  LP  I  L+ L EL+L  N L 
Sbjct: 67  TLILAENRLKTIPNEIEQL----QNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQLS 122

Query: 282 IRFVSDM 288
           +  ++ +
Sbjct: 123 VLPIAQL 129


>gi|379729933|ref|YP_005322129.1| hypothetical protein SGRA_1810 [Saprospira grandis str. Lewin]
 gi|378575544|gb|AFC24545.1| leucine-rich repeat-containing protein [Saprospira grandis str.
           Lewin]
          Length = 606

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 90/254 (35%), Positives = 126/254 (49%), Gaps = 17/254 (6%)

Query: 37  ETL--ATQIELLP--NNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           ETL  A+ +E+L   +N   K PE       +  L   HN L   P       NL  L +
Sbjct: 210 ETLSGASALEVLAIDDNRLKKLPEALIYLKKLTFLFAAHNELQELPPQIGSSRNLVKLCV 269

Query: 87  SNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI 145
            +N++  LP++I     L  L   +N L  + LPK+   LK L+   L  NQL   PI  
Sbjct: 270 EHNQLQRLPESIGQLQKLELLRLEHNQL--KQLPKNFGQLKALRKLYLDSNQLTVLPINF 327

Query: 146 LDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDN 205
            ++  L+ LYL +N L  +P  I    +L  L L  N++T +PD+ G LYQLE L ++DN
Sbjct: 328 GELRALENLYLSDNQLTSLPSGIGNCKELRELFLNNNAMTSLPDSMGTLYQLEELYMNDN 387

Query: 206 QLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK-LKSLLLHNNKLRTLPTEI 264
           Q+ +LP+S   LK LK L L NNK+  L  +   L C   K L ++ L NN  + LP  +
Sbjct: 388 QIANLPSSFGGLKNLKLLFLTNNKINRLSED---LDCSGWKRLSAIYLENNAFQKLPKAL 444

Query: 265 ITLKCLSELSLRDN 278
            T   L  L L  N
Sbjct: 445 ETAPQLQTLYLDGN 458



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 117/246 (47%), Gaps = 26/246 (10%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA- 115
           ++ L L +N L + P+      NLR L +  N +  LP  +     L+ + A NN L + 
Sbjct: 126 LEELRLSNNQLQYLPEKIKGLRNLRRLYIDGNELRMLPNNLAEIRKLAFIAAENNQLQSI 185

Query: 116 --------------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLY 155
                               + LP+ +S    L+V  +  N+L++ P  ++ +  L +L+
Sbjct: 186 PETLGKLKRLRSLLLDKNQLQYLPETLSGASALEVLAIDDNRLKKLPEALIYLKKLTFLF 245

Query: 156 LGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASIS 215
             +N L  +P +I     L  L +  N L  +P++ G L +LE L L  NQL+ LP +  
Sbjct: 246 AAHNELQELPPQIGSSRNLVKLCVEHNQLQRLPESIGQLQKLELLRLEHNQLKQLPKNFG 305

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            LK L+ L L +N+L  LP     L+     L++L L +N+L +LP+ I   K L EL L
Sbjct: 306 QLKALRKLYLDSNQLTVLPINFGELRA----LENLYLSDNQLTSLPSGIGNCKELRELFL 361

Query: 276 RDNPLV 281
            +N + 
Sbjct: 362 NNNAMT 367



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 116/226 (51%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           + +  L L +++L    D+  +F +L  L+L NN +  LP  + + P L  L   NN L 
Sbjct: 78  DRVHRLDLSNDSLVSLGDSIREFRHLFFLNLENNYLKELPDGLFDLPYLEELRLSNNQL- 136

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            + LP+ +  L+NL+   + GN+L   P  + +I  L ++   NN L  +P  + KL +L
Sbjct: 137 -QYLPEKIKGLRNLRRLYIDGNELRMLPNNLAEIRKLAFIAAENNQLQSIPETLGKLKRL 195

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P+T      LE L + DN+L+ LP ++  LK L  L   +N+L+ LP
Sbjct: 196 RSLLLDKNQLQYLPETLSGASALEVLAIDDNRLKKLPEALIYLKKLTFLFAAHNELQELP 255

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +I +    S  L  L + +N+L+ LP  I  L+ L  L L  N L
Sbjct: 256 PQIGS----SRNLVKLCVEHNQLQRLPESIGQLQKLELLRLEHNQL 297



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 134/258 (51%), Gaps = 25/258 (9%)

Query: 84  LDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
           LDLSN+ +  L  +I  F  L  L   NN L  + LP  + +L  L+   LS NQL+  P
Sbjct: 83  LDLSNDSLVSLGDSIREFRHLFFLNLENNYL--KELPDGLFDLPYLEELRLSNNQLQYLP 140

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
            +I  +  L+ LY+  N L  +P  + ++ KL  ++   N L  IP+T G L +L +L+L
Sbjct: 141 EKIKGLRNLRRLYIDGNELRMLPNNLAEIRKLAFIAAENNQLQSIPETLGKLKRLRSLLL 200

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
             NQL+ LP ++S    L+ L + +N+L+ LP  +I LK    KL  L   +N+L+ LP 
Sbjct: 201 DKNQLQYLPETLSGASALEVLAIDDNRLKKLPEALIYLK----KLTFLFAAHNELQELPP 256

Query: 263 EIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQ-EHLPQNLVQ 321
           +I + + L +L +  N L           P S+ +L  + L++  ++++Q + LP+N  Q
Sbjct: 257 QIGSSRNLVKLCVEHNQL--------QRLPESIGQL--QKLELLRLEHNQLKQLPKNFGQ 306

Query: 322 -------YLESAHHCVNP 332
                  YL+S    V P
Sbjct: 307 LKALRKLYLDSNQLTVLP 324



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 82/175 (46%), Gaps = 3/175 (1%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           +  L L +N ++  PD+      L  L +++N+I +LP +      L  L   NN +   
Sbjct: 356 LRELFLNNNAMTSLPDSMGTLYQLEELYMNDNQIANLPSSFGGLKNLKLLFLTNNKINRL 415

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREIN-KLCKLH 175
           S   D S  K L    L  N  ++ P  +   P L+ LYL  N ++ V   I  K+ K+ 
Sbjct: 416 SEDLDCSGWKRLSAIYLENNAFQKLPKALETAPQLQTLYLDGNLISEVNDSIIIKMPKIE 475

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
            +SL  N L+++PD  G  + +  L L  N +  LP SI   K L+ L L  NK+
Sbjct: 476 HISLNDNQLSELPDNMGS-WPIRHLALERNGIMDLPESIRYFKNLELLDLAGNKI 529



 Score = 39.7 bits (91), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 37/135 (27%), Positives = 68/135 (50%), Gaps = 9/135 (6%)

Query: 56  ENIDTLLLYHNNLSFFPDN--ASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           +N+  L L +N ++   ++   S +  L ++ L NN    LP+A+   P L TL    NL
Sbjct: 400 KNLKLLFLTNNKINRLSEDLDCSGWKRLSAIYLENNAFQKLPKALETAPQLQTLYLDGNL 459

Query: 113 LTA--ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
           ++   +S+   M  ++++   +L+ NQL + P  +   P +++L L  N +  +P  I  
Sbjct: 460 ISEVNDSIIIKMPKIEHI---SLNDNQLSELPDNMGSWP-IRHLALERNGIMDLPESIRY 515

Query: 171 LCKLHVLSLGGNSLT 185
              L +L L GN +T
Sbjct: 516 FKNLELLDLAGNKIT 530


>gi|443734386|gb|ELU18388.1| hypothetical protein CAPTEDRAFT_137734 [Capitella teleta]
          Length = 725

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 96/335 (28%), Positives = 159/335 (47%), Gaps = 59/335 (17%)

Query: 46  LPNNDYNKKP------ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +ND ++ P        ++ L L  N+LS  P++ +   NL+ + LS N     P  +T
Sbjct: 339 LEDNDISELPSCVCALAELEVLNLDGNSLSSLPNDIANLENLQHVTLSRNSFGTFPMPLT 398

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               + TL   +N  +   LP++ +NL+NLK+F +S N +++FP+Q+  IP L+ + L N
Sbjct: 399 QLSTIETLRMCHN--SIAQLPEEFTNLQNLKLFEMSHNVMQEFPVQLCFIPGLETVNLAN 456

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD-------------- 204
           N L  V  E+NKL KL  L +  N+   +P     + ++E LILS               
Sbjct: 457 NKLESVAVEVNKLNKLTELDISNNNFDSLPLEVCSIPKIEKLILSQEEGLRLKNIPEEFA 516

Query: 205 -----------NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLH 253
                      N +  LPA ++    L SL + +N+L +LP EI    C S+KL++  ++
Sbjct: 517 RCRAEHLHLDYNDIRELPAFLAKSNNLTSLTMSHNRLTSLPDEI----CKSQKLRTFHVN 572

Query: 254 NNKLRTLPTEIITLKCLSELSLRDNPL---------------VIRFVSDMTYKPPSLL-- 296
           +N++  LP     +  L++L L DNPL               + RF+S        LL  
Sbjct: 573 DNQITKLPEMFGKMHHLTDLRLHDNPLKNPPSDVVVGGVLQPIDRFISKHIAHEDMLLNR 632

Query: 297 --ELASRTLKVHEIDY--SQEHLPQNLVQYLESAH 327
             E    +L  HE+ Y  S+   P+  ++ LE+ +
Sbjct: 633 VFEAMKDSLNKHELRYLMSKFRFPEEKIEDLEATY 667



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 106/214 (49%), Gaps = 8/214 (3%)

Query: 70  FFPDNASKFTNLRSLDLSNNRITHL--PQAITNFPLSTLIARNNLLTAESLPKDMSNLKN 127
           F P       +L+ L LS+N+I  L  P+      L  L   NN +    +P ++  ++ 
Sbjct: 207 FIPIQIFWLESLQELALSSNKIKALQGPEMAKLKNLKILGLNNNFIV--EIPGEIGQMEM 264

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           L++  L GN +   P++I ++  L+ LYLGNN L  +P E++  C +++L+L  N L D+
Sbjct: 265 LEILGLEGNSISVIPVEIGNLANLEELYLGNNCLESLPEELSLCCAMNILNLAKNHLCDV 324

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
           P     L Q+ +L L DN +  LP+ +  L  L+ L L  N L +LP +I  L    E L
Sbjct: 325 PVELKILTQMISLSLEDNDISELPSCVCALAELEVLNLDGNSLSSLPNDIANL----ENL 380

Query: 248 KSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           + + L  N   T P  +  L  +  L +  N + 
Sbjct: 381 QHVTLSRNSFGTFPMPLTQLSTIETLRMCHNSIA 414



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 80/150 (53%), Gaps = 4/150 (2%)

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            +L G  L     +I+D  TL  L L +N +  +P E+  L  L +L L  N L +IP  
Sbjct: 14  LSLIGKHLTSISPKIVDCETLNCLILASNEITSIPVELGNLINLEILILQSNKLHEIPSV 73

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
            G L +L+ L LSDN L  LP  IS L+ L  L+L+NNKL  +  +II L     +L+ L
Sbjct: 74  LGVLQKLQLLDLSDNFLTELPVEISGLRRLTQLVLNNNKLTEIAPQIIDLT----QLEVL 129

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            L+ N +  +P+ I  L+ L  L+L  N L
Sbjct: 130 GLNGNNIHEIPSAISKLQNLQVLALECNEL 159



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 118/249 (47%), Gaps = 31/249 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L+L  N L   P        L+ LDLS+N +T LP  I+    L+ L+  NN LT 
Sbjct: 56  NLEILILQSNKLHEIPSVLGVLQKLQLLDLSDNFLTELPVEISGLRRLTQLVLNNNKLT- 114

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +   + +L  L+V  L+GN + + P  I  +  L+ L L  N L+ +  E+  +  L 
Sbjct: 115 -EIAPQIIDLTQLEVLGLNGNNIHEIPSAISKLQNLQVLALECNELDFLSVEVCHIHGLQ 173

Query: 176 VLSLGGNSLTDIPDTFGDLY-----------------------QLEALILSDNQLESLPA 212
            L + GN++T++P    +L                         L+ L LS N++++L  
Sbjct: 174 KLQVSGNNITNLPYGIENLVCLQQLLLDDNDLDFIPIQIFWLESLQELALSSNKIKALQG 233

Query: 213 -SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             ++ LK LK L L+NN +  +P EI  +    E L+ L L  N +  +P EI  L  L 
Sbjct: 234 PEMAKLKNLKILGLNNNFIVEIPGEIGQM----EMLEILGLEGNSISVIPVEIGNLANLE 289

Query: 272 ELSLRDNPL 280
           EL L +N L
Sbjct: 290 ELYLGNNCL 298



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 69/222 (31%), Positives = 107/222 (48%), Gaps = 23/222 (10%)

Query: 81  LRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
           L  L L++N IT +P  + N   L  LI ++N L    +P  +  L+ L++ +LS N L 
Sbjct: 34  LNCLILASNEITSIPVELGNLINLEILILQSNKL--HEIPSVLGVLQKLQLLDLSDNFLT 91

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
           + P++I  +  L  L L NN L  +  +I  L +L VL L GN++ +IP     L  L+ 
Sbjct: 92  ELPVEISGLRRLTQLVLNNNKLTEIAPQIIDLTQLEVLGLNGNNIHEIPSAISKLQNLQV 151

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS--------------- 244
           L L  N+L+ L   + ++  L+ L +  N +  LP  I  L CL                
Sbjct: 152 LALECNELDFLSVEVCHIHGLQKLQVSGNNITNLPYGIENLVCLQQLLLDDNDLDFIPIQ 211

Query: 245 ----EKLKSLLLHNNKLRTLPT-EIITLKCLSELSLRDNPLV 281
               E L+ L L +NK++ L   E+  LK L  L L +N +V
Sbjct: 212 IFWLESLQELALSSNKIKALQGPEMAKLKNLKILGLNNNFIV 253



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 110/242 (45%), Gaps = 43/242 (17%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           E ++ L L  N++S  P       NL  L L NN +                        
Sbjct: 263 EMLEILGLEGNSISVIPVEIGNLANLEELYLGNNCL------------------------ 298

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ESLP+++S    + + NL+ N L   P+++  +  +  L L +N ++ +P  +  L +L 
Sbjct: 299 ESLPEELSLCCAMNILNLAKNHLCDVPVELKILTQMISLSLEDNDISELPSCVCALAELE 358

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           VL+L GNSL+ +P+   +L  L+ + LS N   + P  ++ L  +++L + +N +  LP 
Sbjct: 359 VLNLDGNSLSSLPNDIANLENLQHVTLSRNSFGTFPMPLTQLSTIETLRMCHNSIAQLPE 418

Query: 236 EIITLK-------------------CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           E   L+                   C    L+++ L NNKL ++  E+  L  L+EL + 
Sbjct: 419 EFTNLQNLKLFEMSHNVMQEFPVQLCFIPGLETVNLANNKLESVAVEVNKLNKLTELDIS 478

Query: 277 DN 278
           +N
Sbjct: 479 NN 480



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 84/162 (51%), Gaps = 4/162 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           S+   + + + L    L+ N++   P+++ ++  L+ L L +N L+ +P  +  L KL +
Sbjct: 23  SISPKIVDCETLNCLILASNEITSIPVELGNLINLEILILQSNKLHEIPSVLGVLQKLQL 82

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N LT++P     L +L  L+L++N+L  +   I +L  L+ L L+ N +  +P+ 
Sbjct: 83  LDLSDNFLTELPVEISGLRRLTQLVLNNNKLTEIAPQIIDLTQLEVLGLNGNNIHEIPSA 142

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           I  L    + L+ L L  N+L  L  E+  +  L +L +  N
Sbjct: 143 ISKL----QNLQVLALECNELDFLSVEVCHIHGLQKLQVSGN 180


>gi|354469152|ref|XP_003496994.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1-like [Cricetulus griseus]
          Length = 855

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 74/220 (33%), Positives = 118/220 (53%), Gaps = 10/220 (4%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI-TNFPLSTLIARNNLLTAESLPKDMSN 124
           N L    ++    TNL  LD+  N+I  +P  I T   L  LI   N    E+ PK++  
Sbjct: 516 NKLPVLSEHLCSLTNLEYLDVGQNQIKTIPSCISTMVSLRVLIVSGN--KFETFPKELCA 573

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG---G 181
           L NL+V ++S NQL++ P  I  +  ++ L L +N  ++ P E+ +L  L  L L    G
Sbjct: 574 LHNLQVLDISENQLQKLPSDITKLKGIQKLNLSSNRFSYFPVELCQLQTLEALYLSRTHG 633

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
             LT +P+    + QL+ L +S+N ++ +P +I  L+ L SL  +NN++ +LP   ++LK
Sbjct: 634 RMLTRLPEELTSMTQLKTLDISNNAIKEIPRNIGELRYLVSLHAYNNQISSLPPSFLSLK 693

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L    + L L  N L  LP+ I +L  L E++  DNPL+
Sbjct: 694 VL----QHLDLRGNNLTALPSAIYSLMSLKEINFDDNPLL 729



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 186/400 (46%), Gaps = 44/400 (11%)

Query: 6   GSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYH 65
           G+S SS++ +++ ++ V + +          E ++ Q       +++ + +N  T+ L  
Sbjct: 97  GTSISSETKETEDYQKVRVPS---------GEKVSPQGSKESQKEFDLEEDNF-TVNLEA 146

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN--FPLSTLIARNNLLTAESLPKDMS 123
             L  FP +  K   ++ L L  N+I     A       L  L  + N L+  S+P ++ 
Sbjct: 147 RGLQEFPRDVFKAKYVKYLYLDKNQIKTFKVADPGDLLGLEILSLQENGLS--SIPLEIH 204

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            L NL++ N S NQ+   P ++L +  ++ L+L +N + ++P ++  L  L  LSLG N 
Sbjct: 205 LLTNLRILNASYNQISCIPKELLQLENMRQLFLNSNCIENLPSDLESLINLETLSLGKNM 264

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT++P++   L  L+ L L  NQL     S+  L  L SL L  N + +LP EI  LK  
Sbjct: 265 LTNVPESLSSLKNLQVLNLEYNQLTIFSKSLCFLPKLISLNLTGNMIGSLPKEIRELK-- 322

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL--------------VIRFVSDMT 289
              L++LL+ +NKL  L  EI  L  + EL L DN L              ++    ++ 
Sbjct: 323 --NLENLLMDHNKLTFLSVEIFQLPKIKELQLADNKLEAISPKIENFRELRILNLDKNLL 380

Query: 290 YKPPSLLELASRTLKVHEI---DYSQEHLPQNL--VQYLESAHHCVNPKCKGVFFDNRIE 344
            K P  L   SR +K+  +   D S E LP+ +  ++ L+  H   N   K     + + 
Sbjct: 381 KKIPKKL---SRCVKLECLSLSDNSIEELPRKIHRLKNLKQLHVSRNKMIKMAEEISHLS 437

Query: 345 HIKFVDFCGKY--RIPLLQYLCS--SRCITNSPNVMYGDV 380
           +I  ++F G     IP+    C   +R   N  N+MY  V
Sbjct: 438 NIISLEFSGNQITHIPIEIKNCRKITRVELNYNNIMYFPV 477



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 101/194 (52%), Gaps = 8/194 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLT 114
           N++ L +  N +   P   S   +LR L +S N+    P+ +     L  L I+ N L  
Sbjct: 530 NLEYLDVGQNQIKTIPSCISTMVSLRVLIVSGNKFETFPKELCALHNLQVLDISENQL-- 587

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG---NNSLNHVPREINKL 171
            + LP D++ LK ++  NLS N+   FP+++  + TL+ LYL       L  +P E+  +
Sbjct: 588 -QKLPSDITKLKGIQKLNLSSNRFSYFPVELCQLQTLEALYLSRTHGRMLTRLPEELTSM 646

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
            +L  L +  N++ +IP   G+L  L +L   +NQ+ SLP S  +LK+L+ L L  N L 
Sbjct: 647 TQLKTLDISNNAIKEIPRNIGELRYLVSLHAYNNQISSLPPSFLSLKVLQHLDLRGNNLT 706

Query: 232 TLPTEIITLKCLSE 245
            LP+ I +L  L E
Sbjct: 707 ALPSAIYSLMSLKE 720



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 77/274 (28%), Positives = 125/274 (45%), Gaps = 31/274 (11%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-- 100
           IE LP   +  K  N+  L +  N +    +  S  +N+ SL+ S N+ITH+P  I N  
Sbjct: 403 IEELPRKIHRLK--NLKQLHVSRNKMIKMAEEISHLSNIISLEFSGNQITHIPIEIKNCR 460

Query: 101 --------------FP--------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
                         FP        L  L    N ++   +P D+S  K L    L+ N+L
Sbjct: 461 KITRVELNYNNIMYFPVGLCALPSLDYLSFNGNYIS--EIPMDVSFSKQLLHLELNTNKL 518

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
                 +  +  L+YL +G N +  +P  I+ +  L VL + GN     P     L+ L+
Sbjct: 519 PVLSEHLCSLTNLEYLDVGQNQIKTIPSCISTMVSLRVLIVSGNKFETFPKELCALHNLQ 578

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L +S+NQL+ LP+ I+ LK ++ L L +N+    P E+  L+ L E L     H   L 
Sbjct: 579 VLDISENQLQKLPSDITKLKGIQKLNLSSNRFSYFPVELCQLQTL-EALYLSRTHGRMLT 637

Query: 259 TLPTEIITLKCLSELSLRDNPL--VIRFVSDMTY 290
            LP E+ ++  L  L + +N +  + R + ++ Y
Sbjct: 638 RLPEELTSMTQLKTLDISNNAIKEIPRNIGELRY 671



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 105/224 (46%), Gaps = 7/224 (3%)

Query: 60  TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESL 118
           +L L  N +   P    +  NL +L + +N++T L   I   P +  L   +N L A S 
Sbjct: 303 SLNLTGNMIGSLPKEIRELKNLENLLMDHNKLTFLSVEIFQLPKIKELQLADNKLEAIS- 361

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           PK + N + L++ NL  N L++ P ++     L+ L L +NS+  +PR+I++L  L  L 
Sbjct: 362 PK-IENFRELRILNLDKNLLKKIPKKLSRCVKLECLSLSDNSIEELPRKIHRLKNLKQLH 420

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           +  N +  + +    L  + +L  S NQ+  +P  I N + +  + L+ N +   P  + 
Sbjct: 421 VSRNKMIKMAEEISHLSNIISLEFSGNQITHIPIEIKNCRKITRVELNYNNIMYFPVGL- 479

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
              C    L  L  + N +  +P ++   K L  L L  N L +
Sbjct: 480 ---CALPSLDYLSFNGNYISEIPMDVSFSKQLLHLELNTNKLPV 520


>gi|260788686|ref|XP_002589380.1| hypothetical protein BRAFLDRAFT_77822 [Branchiostoma floridae]
 gi|229274557|gb|EEN45391.1| hypothetical protein BRAFLDRAFT_77822 [Branchiostoma floridae]
          Length = 670

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/245 (29%), Positives = 124/245 (50%), Gaps = 22/245 (8%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI-TNFPLSTLIARNNLLT 114
           + +  L ++ NNLS  PD      NL  L + +N++  LP  I +   L    A NN L+
Sbjct: 82  QGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKKLPTKIFSCLNLVNFDASNNNLS 141

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             + P  +  L+ L+   + GNQL + P  +  +P L+ L + NN+L+  P  + KL KL
Sbjct: 142 --TFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVYNNNLSTFPPGVEKLQKL 199

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L + GN LT++P     L  LE L + +N L + P  +  L+ L+ L +H+N+L  +P
Sbjct: 200 RELYIYGNQLTEVPSGVCSLPNLEKLSVYNNNLSTFPPGVEKLQKLRELYIHDNQLTEVP 259

Query: 235 TEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
           + + +L  L                    +KL+ L +H+N+L  +P+ + +L  L  LS+
Sbjct: 260 SGVCSLPNLEKLSVYNNNLSTFPPGVEKLQKLRELYIHHNQLTEVPSGVCSLPNLEVLSV 319

Query: 276 RDNPL 280
            +NP+
Sbjct: 320 GNNPI 324



 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/261 (29%), Positives = 139/261 (53%), Gaps = 19/261 (7%)

Query: 52  NKKPENIDTLL---LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLI 107
           N +P+ ++ LL   L +  L+  P+     T+L  LD+SNN++T +P+AI     LS L 
Sbjct: 6   NLQPQTVNGLLTLDLSNQGLTSIPEEVFDITDLEFLDVSNNKLTSIPEAIGRLQNLSRLD 65

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE 167
           A  N++T  SLP+ +S+L+ LK   +  N L + P  + D+  L++L++ +N L  +P +
Sbjct: 66  ADGNMMT--SLPQAISSLQGLKQLYVHSNNLSELPDGLEDLQNLEWLWVKDNKLKKLPTK 123

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           I     L       N+L+  P     L +L  L +  NQL  +P+ + +L  L+ L ++N
Sbjct: 124 IFSCLNLVNFDASNNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVYN 183

Query: 228 NKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSD 287
           N L T P  +  L    +KL+ L ++ N+L  +P+ + +L  L +LS+ +N        +
Sbjct: 184 NNLSTFPPGVEKL----QKLRELYIYGNQLTEVPSGVCSLPNLEKLSVYNN--------N 231

Query: 288 MTYKPPSLLELAS-RTLKVHE 307
           ++  PP + +L   R L +H+
Sbjct: 232 LSTFPPGVEKLQKLRELYIHD 252



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 81/294 (27%), Positives = 141/294 (47%), Gaps = 26/294 (8%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L +Y+NNLS FP    K   LR L + +N++T +P  + + P L  L   NN +  
Sbjct: 267 NLEKLSVYNNNLSTFPPGVEKLQKLRELYIHHNQLTEVPSGVCSLPNLEVLSVGNNPIRC 326

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS---LNHVPREINKLC 172
             LP +++ L  +K  ++   Q ++FP Q+L + TL+ LY G N     + VP E+  L 
Sbjct: 327 --LPDEVTRLTRMKTLSVPSCQFDEFPRQVLQLKTLEMLYAGQNGGRKFDMVPDEVGNLQ 384

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L+L  N L  +P T   L+ L  + L +N+ ++ P  +  L  ++ L + NN +  
Sbjct: 385 HLWFLALENNLLRTLPSTMSHLHNLRQVQLWNNKFDTFPEVLCELPAMEKLDIKNNNITR 444

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI------ITLKCLSELSLRDNPLVIRF-- 284
           +PT +      ++KL+ L +  N L   P ++        +  L + + +D  ++  F  
Sbjct: 445 IPTALHR----ADKLRDLDVSGNPLTYPPQDVCKQGTGAIMAFLKQEAEKDERILSAFNR 500

Query: 285 ----VSDMTYKP-PSLLELASRTL---KVHEIDYSQEHLPQNLVQYLESAHHCV 330
               +S   +KP    L L++R +   KV   D   + + Q LVQ+ E      
Sbjct: 501 LSVRMSQTQWKPLARSLGLSNRAMDAIKVSAPDDVPDQVYQTLVQWREKEGEAA 554



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/238 (28%), Positives = 111/238 (46%), Gaps = 30/238 (12%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
           +NNLS FP    K   LR L +  N++T +P  + + P L  L   NN L+  + P  + 
Sbjct: 137 NNNLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVYNNNLS--TFPPGVE 194

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            L+ L+   + GNQL + P  +  +P L+ L + NN+L+  P  + KL KL  L +  N 
Sbjct: 195 KLQKLRELYIYGNQLTEVPSGVCSLPNLEKLSVYNNNLSTFPPGVEKLQKLRELYIHDNQ 254

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLH----------------- 226
           LT++P     L  LE L + +N L + P  +  L+ L+ L +H                 
Sbjct: 255 LTEVPSGVCSLPNLEKLSVYNNNLSTFPPGVEKLQKLRELYIHHNQLTEVPSGVCSLPNL 314

Query: 227 ------NNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
                 NN +R LP E+  L     ++K+L + + +    P +++ LK L  L    N
Sbjct: 315 EVLSVGNNPIRCLPDEVTRLT----RMKTLSVPSCQFDEFPRQVLQLKTLEMLYAGQN 368


>gi|353230339|emb|CCD76510.1| cell polarity protein [Schistosoma mansoni]
          Length = 1450

 Score =  105 bits (262), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 80/243 (32%), Positives = 124/243 (51%), Gaps = 8/243 (3%)

Query: 41  TQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN 100
           +++E +P+ D  +    ++   L  N +   P N+ + T +R L LS+N +T LP  I +
Sbjct: 23  SKLEQVPD-DVIRNFRTLEECRLDANQIKELPKNSLRLTRIRLLTLSDNELTRLPTGIGS 81

Query: 101 FP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
           F   +   I+RN +++AE LP  +    +L+  ++S N L+  P     +  L+ L L +
Sbjct: 82  FSNLVELDISRNGMISAE-LPASIRFCDSLQSLDVSNNPLQSLPAGFCQLRNLRVLCLND 140

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
            S+  +P EI  L  L  L L  N L  IPD+F DL  LE L L  N+ + L   I  L 
Sbjct: 141 ISIAELPEEIGSLQLLEKLELRDNCLKSIPDSFADLIHLEFLDLGANEFQELSPVIGQLS 200

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L  L + +N+LR+LP E+  L      L+ L L  N + TLP  I  L  LS+L+L  N
Sbjct: 201 QLSELWIDDNELRSLPKELGNLG----NLQQLDLSENLISTLPESISGLVSLSDLNLSQN 256

Query: 279 PLV 281
            + 
Sbjct: 257 SIT 259



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 80/224 (35%), Positives = 109/224 (48%), Gaps = 7/224 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           ++ L L  N L   PD+ +   +L  LDL  N    L   I     LS L   +N L   
Sbjct: 156 LEKLELRDNCLKSIPDSFADLIHLEFLDLGANEFQELSPVIGQLSQLSELWIDDNEL--R 213

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           SLPK++ NL NL+  +LS N +   P  I  + +L  L L  NS+ H+P  +  L KL +
Sbjct: 214 SLPKELGNLGNLQQLDLSENLISTLPESISGLVSLSDLNLSQNSITHLPNGLGDLDKLII 273

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L  +  T G+   L+ L L++N L  LP+SI NL  +  L +  N+L  LP+E
Sbjct: 274 LKLNQNRLLTVTPTIGNCSSLQELYLTENFLSKLPSSIGNLVSMFHLNVDQNQLTELPSE 333

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I   +C S  L  L L  N L  LP EI     L  L +  N L
Sbjct: 334 I--GQCTS--LNILSLRENNLHRLPDEIGNCTRLRVLDVSGNRL 373



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 58/175 (33%), Positives = 84/175 (48%), Gaps = 3/175 (1%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L +  N L   P       NL+ LDLS N I+ LP++I+    LS L    N +T   LP
Sbjct: 205 LWIDDNELRSLPKELGNLGNLQQLDLSENLISTLPESISGLVSLSDLNLSQNSIT--HLP 262

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +L  L +  L+ N+L      I +  +L+ LYL  N L+ +P  I  L  +  L++
Sbjct: 263 NGLGDLDKLIILKLNQNRLLTVTPTIGNCSSLQELYLTENFLSKLPSSIGNLVSMFHLNV 322

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             N LT++P   G    L  L L +N L  LP  I N   L+ L +  N+L  LP
Sbjct: 323 DQNQLTELPSEIGQCTSLNILSLRENNLHRLPDEIGNCTRLRVLDVSGNRLDRLP 377



 Score = 71.6 bits (174), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 62/189 (32%), Positives = 99/189 (52%), Gaps = 14/189 (7%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIA----RNNL 112
           N+  L L  N +S  P++ S   +L  L+LS N ITHLP  + +  L  LI     +N L
Sbjct: 224 NLQQLDLSENLISTLPESISGLVSLSDLNLSQNSITHLPNGLGD--LDKLIILKLNQNRL 281

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT       + N  +L+   L+ N L + P  I ++ ++ +L +  N L  +P EI +  
Sbjct: 282 LTVTPT---IGNCSSLQELYLTENFLSKLPSSIGNLVSMFHLNVDQNQLTELPSEIGQCT 338

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L++LSL  N+L  +PD  G+  +L  L +S N+L+ LP S+S    L +L L  N+ + 
Sbjct: 339 SLNILSLRENNLHRLPDEIGNCTRLRVLDVSGNRLDRLPFSLSRCS-LTALWLSQNQSQP 397

Query: 233 LPTEIITLK 241
               +ITL+
Sbjct: 398 ----VITLQ 402


>gi|126650300|ref|ZP_01722528.1| Leucine-rich repeat (LRR) protein [Bacillus sp. B14905]
 gi|126592950|gb|EAZ86932.1| Leucine-rich repeat (LRR) protein [Bacillus sp. B14905]
          Length = 289

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 90/254 (35%), Positives = 136/254 (53%), Gaps = 17/254 (6%)

Query: 50  DYN-KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLI 107
           D+N  + + I  L LY N+L   P    + T++  L++S N+I +LP  ITN   L  L 
Sbjct: 20  DFNGSQIKGIKDLNLYDNDLREIPTEIFQMTSIEILNISVNKINNLPAEITNLKNLRMLD 79

Query: 108 ARNNLLTAESLPKDMSNLKNLKVF-NLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPR 166
           A +N    + +P ++ +L N++ +     NQL+  P +I  +  ++YL L +N L+ +P 
Sbjct: 80  AGHN--HIDLIPPEIGHLVNMEDYLYFHHNQLQSIPPEIGQLTKVRYLNLSDNLLSGLPE 137

Query: 167 EINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLH 226
           EI  L KL  L +  N LT++P++   L  L  L L  N + SLP  I  L +L+ L L 
Sbjct: 138 EIGNLNKLVELRIMNNRLTELPESLCRLTNLRELHLKKNSMTSLPEKIGELALLRVLELE 197

Query: 227 NNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVS 286
           +N+L+ +P  + T  C+  KL+ L L  NKL+TLP  I  LK L EL LR N        
Sbjct: 198 DNQLQEVPDSLHT--CI--KLRRLNLRQNKLKTLPASIGQLKNLIELDLRSN-------- 245

Query: 287 DMTYKPPSLLELAS 300
           D+   P SLL + S
Sbjct: 246 DLKELPESLLAMES 259



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 61/185 (32%), Positives = 93/185 (50%), Gaps = 3/185 (1%)

Query: 59  DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAES 117
           D L  +HN L   P    + T +R L+LS+N ++ LP+ I N   L  L   NN LT   
Sbjct: 100 DYLYFHHNQLQSIPPEIGQLTKVRYLNLSDNLLSGLPEEIGNLNKLVELRIMNNRLT--E 157

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LP+ +  L NL+  +L  N +   P +I ++  L+ L L +N L  VP  ++   KL  L
Sbjct: 158 LPESLCRLTNLRELHLKKNSMTSLPEKIGELALLRVLELEDNQLQEVPDSLHTCIKLRRL 217

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
           +L  N L  +P + G L  L  L L  N L+ LP S+  ++ L+ L L  N    +P+ +
Sbjct: 218 NLRQNKLKTLPASIGQLKNLIELDLRSNDLKELPESLLAMESLERLDLRWNHELKIPSWL 277

Query: 238 ITLKC 242
             L+ 
Sbjct: 278 DELEA 282


>gi|427737941|ref|YP_007057485.1| hypothetical protein Riv7116_4517 [Rivularia sp. PCC 7116]
 gi|427372982|gb|AFY56938.1| leucine-rich repeat (LRR) protein [Rivularia sp. PCC 7116]
          Length = 868

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 79/209 (37%), Positives = 105/209 (50%), Gaps = 6/209 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L  N LS  P    +   L+ L L  N+++ LP+ I     L +L    N L+ 
Sbjct: 63  NLQFLYLLENQLSTLPAEIGQLRKLQCLYLRRNQLSILPEEIGQLTNLQSLYLNENQLS- 121

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LP +   L+ L+ F L  NQL   P +I  +  L+ LYL  N L+ +P EI +L  L 
Sbjct: 122 -TLPAEFGQLRKLQCFYLRRNQLSSLPEEIGQLTNLQSLYLNENQLSTLPPEIGQLSNLQ 180

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L+ +P   G L  L+ L LS NQL SLP  I  L  L+SL L  N+L +LP 
Sbjct: 181 YLHLSYNQLSSLPPEIGQLSNLQYLHLSYNQLSSLPEEIGQLTNLQSLYLRYNQLSSLPP 240

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           EI  L      L  L L  N L +LP EI
Sbjct: 241 EIGRLHS---HLTELTLDGNPLESLPAEI 266



 Score =  104 bits (260), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 84/228 (36%), Positives = 117/228 (51%), Gaps = 11/228 (4%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQ---AITNFPLSTLIARNNL 112
           E    L L  N L+  P    + TNL+ L LS N+++ LP+    +TN     L+  N L
Sbjct: 16  EGWTELDLSGNELTALPPEIGQLTNLQYLHLSYNQLSSLPEEFGQLTNLQFLYLL-ENQL 74

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
            T   LP ++  L+ L+   L  NQL   P +I  +  L+ LYL  N L+ +P E  +L 
Sbjct: 75  ST---LPAEIGQLRKLQCLYLRRNQLSILPEEIGQLTNLQSLYLNENQLSTLPAEFGQLR 131

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL    L  N L+ +P+  G L  L++L L++NQL +LP  I  L  L+ L L  N+L +
Sbjct: 132 KLQCFYLRRNQLSSLPEEIGQLTNLQSLYLNENQLSTLPPEIGQLSNLQYLHLSYNQLSS 191

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           LP EI  L      L+ L L  N+L +LP EI  L  L  L LR N L
Sbjct: 192 LPPEIGQLS----NLQYLHLSYNQLSSLPEEIGQLTNLQSLYLRYNQL 235


>gi|126733913|ref|ZP_01749660.1| hypothetical protein RCCS2_07139 [Roseobacter sp. CCS2]
 gi|126716779|gb|EBA13643.1| hypothetical protein RCCS2_07139 [Roseobacter sp. CCS2]
          Length = 970

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 80/237 (33%), Positives = 128/237 (54%), Gaps = 14/237 (5%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTL----IAR 109
           K EN+  + L +  LS  P    +  +L SLDLS+N+    P+    F LS+L    ++ 
Sbjct: 17  KKENLKEVDLSNMGLSEIPSELFEIPDLLSLDLSHNQFKRFPK--ETFALSSLRTFEMSH 74

Query: 110 NNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREIN 169
           N +   + LP+D  +L+NL + NL+  +L++ P    ++ +L++LYLG N+L+++P   N
Sbjct: 75  NPI---KKLPEDWHHLQNLALLNLTEVELDELPDGFCELGSLQFLYLGYNNLSYLPESFN 131

Query: 170 KLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
            L KL  L L  N    IP        LE L L  +++ S+P  IS    L+ L + +N+
Sbjct: 132 NLKKLRHLFLHRNRFNSIPGNLKLYKSLETLTLG-SKVRSIPKRISRFANLRRLCIVDNE 190

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVS 286
           L +LP E+  L    E+L SL L  NKL+ +P+EI  +  L+ L++  N L    VS
Sbjct: 191 LASLPKEVAKL----ERLNSLELSGNKLQAIPSEIGFMSDLTTLTIHGNDLPASLVS 243



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 108/237 (45%), Gaps = 47/237 (19%)

Query: 76  SKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSG 135
           +K  NL+ +DLSN  ++ +P  +   P                        +L   +LS 
Sbjct: 16  AKKENLKEVDLSNMGLSEIPSELFEIP------------------------DLLSLDLSH 51

Query: 136 NQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLY 195
           NQ ++FP +   + +L+   + +N +  +P + + L  L +L+L    L ++PD F +L 
Sbjct: 52  NQFKRFPKETFALSSLRTFEMSHNPIKKLPEDWHHLQNLALLNLTEVELDELPDGFCELG 111

Query: 196 QLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS----------- 244
            L+ L L  N L  LP S +NLK L+ L LH N+  ++P  +   K L            
Sbjct: 112 SLQFLYLGYNNLSYLPESFNNLKKLRHLFLHRNRFNSIPGNLKLYKSLETLTLGSKVRSI 171

Query: 245 -------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN-----PLVIRFVSDMT 289
                    L+ L + +N+L +LP E+  L+ L+ L L  N     P  I F+SD+T
Sbjct: 172 PKRISRFANLRRLCIVDNELASLPKEVAKLERLNSLELSGNKLQAIPSEIGFMSDLT 228


>gi|124004137|ref|ZP_01688983.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123990207|gb|EAY29706.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 313

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 83/234 (35%), Positives = 117/234 (50%), Gaps = 25/234 (10%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIA-RNNLLTAESLPKDMSNLK 126
           L +FP     +   + L  SN ++  LP+ I     + ++    NLL+  SLP+ + NL 
Sbjct: 67  LQYFP---GLYQQSKMLYFSNAQMNSLPENIGLLSHTEVLKLVGNLLS--SLPESIGNLP 121

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL   +L+ N L Q P  +  +  L+ LYLG N L  +P  + +  +LH L L  N L  
Sbjct: 122 NLHELHLTHNHLTQLPDSLGQLHQLRKLYLGYNQLTQLPNSLYRASQLHSLYLHYNHLQA 181

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS-- 244
           +PDTFG   QLE   L+ N+L  LP +I  LK LK+L LHNN+L  LP  I  L  L   
Sbjct: 182 LPDTFGKFSQLEECYLNANKLTVLPDNIGTLKHLKTLTLHNNQLTILPESIGELAQLQML 241

Query: 245 -----------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                            + L++L L  N+  +LP EI  L  L +L L+DNPL 
Sbjct: 242 DLSSNYLTSLPNSIRQLQSLQTLNLRFNQFTSLPPEIGHLYYLQKLILKDNPLT 295



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 78/225 (34%), Positives = 104/225 (46%), Gaps = 13/225 (5%)

Query: 48  NNDYNKKPENI------DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           N   N  PENI      + L L  N LS  P++     NL  L L++N +T LP ++   
Sbjct: 84  NAQMNSLPENIGLLSHTEVLKLVGNLLSSLPESIGNLPNLHELHLTHNHLTQLPDSLGQL 143

Query: 102 -PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
             L  L    N LT   LP  +     L    L  N L+  P        L+  YL  N 
Sbjct: 144 HQLRKLYLGYNQLT--QLPNSLYRASQLHSLYLHYNHLQALPDTFGKFSQLEECYLNANK 201

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P  I  L  L  L+L  N LT +P++ G+L QL+ L LS N L SLP SI  L+ L
Sbjct: 202 LTVLPDNIGTLKHLKTLTLHNNQLTILPESIGELAQLQMLDLSSNYLTSLPNSIRQLQSL 261

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
           ++L L  N+  +LP EI  L      L+ L+L +N L     E I
Sbjct: 262 QTLNLRFNQFTSLPPEIGHLYY----LQKLILKDNPLTQFEREKI 302



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 65/172 (37%), Positives = 80/172 (46%), Gaps = 12/172 (6%)

Query: 129 KVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
           K+   S  Q+   P  I  +   + L L  N L+ +P  I  L  LH L L  N LT +P
Sbjct: 78  KMLYFSNAQMNSLPENIGLLSHTEVLKLVGNLLSSLPESIGNLPNLHELHLTHNHLTQLP 137

Query: 189 DTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLK 248
           D+ G L+QL  L L  NQL  LP S+     L SL LH N L+ LP        L E   
Sbjct: 138 DSLGQLHQLRKLYLGYNQLTQLPNSLYRASQLHSLYLHYNHLQALPDTFGKFSQLEE--- 194

Query: 249 SLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELAS 300
              L+ NKL  LP  I TLK L  L+L +N L I         P S+ ELA 
Sbjct: 195 -CYLNANKLTVLPDNIGTLKHLKTLTLHNNQLTIL--------PESIGELAQ 237


>gi|372273437|ref|NP_001243220.1| scribbled homolog [Xenopus (Silurana) tropicalis]
 gi|355895400|gb|AET07148.1| scribbled short isoform [Xenopus (Silurana) tropicalis]
          Length = 976

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 87/250 (34%), Positives = 122/250 (48%), Gaps = 32/250 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P    +  NLR L LS+N I  LP  + NF  L  L I+RN++  
Sbjct: 37  SLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDI-- 94

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK---- 170
              +P+ +   K+L++ + SGN L + P     + +L +L L + SL  +P +I      
Sbjct: 95  -PEIPESIKFCKSLEIADFSGNPLSRLPDGFTQLRSLAHLALNDVSLQSLPSDIGNLSNL 153

Query: 171 -------------------LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
                              L KL  L LG N L  +PDT G L  L  L L  NQL SLP
Sbjct: 154 VTLELRENVLKSVPMSLSFLVKLEQLDLGSNDLQVLPDTLGALPNLRELWLDRNQLSSLP 213

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
           + + NL+ L  L +  NKL  LP EI  L  L++    LLL  N+L +LP+ +  LK LS
Sbjct: 214 SELGNLRRLVCLDVSENKLEQLPAEISGLMSLTD----LLLSQNQLSSLPSSLGQLKQLS 269

Query: 272 ELSLRDNPLV 281
            L +  N L 
Sbjct: 270 ILKVDQNRLT 279



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 118/226 (52%), Gaps = 7/226 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ TL L  N L   P + S    L  LDL +N +  LP  +   P L  L    N L+ 
Sbjct: 152 NLVTLELRENVLKSVPMSLSFLVKLEQLDLGSNDLQVLPDTLGALPNLRELWLDRNQLS- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLP ++ NL+ L   ++S N+LEQ P +I  + +L  L L  N L+ +P  + +L +L 
Sbjct: 211 -SLPSELGNLRRLVCLDVSENKLEQLPAEISGLMSLTDLLLSQNQLSSLPSSLGQLKQLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT + ++ GD   L  +IL++N L  LP S+ NL  L +L +  N+L +LP+
Sbjct: 270 ILKVDQNRLTQLTESIGDCENLSEIILTENLLTVLPKSMGNLTKLTNLNVDRNRLLSLPS 329

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           EI    C S  L  L L +N+L  LP E+     L  L +  N L+
Sbjct: 330 EIGG--CAS--LNVLSLRDNQLSALPPELAGATELHVLDVAGNRLL 371



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 83/249 (33%), Positives = 122/249 (48%), Gaps = 28/249 (11%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI-----------TNFPLST 105
           N+  L L  N +   P   + F  L  LD+S N I  +P++I           +  PLS 
Sbjct: 60  NLRKLGLSDNEIQRLPPEVANFMQLVELDISRNDIPEIPESIKFCKSLEIADFSGNPLSR 119

Query: 106 L------------IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKY 153
           L            +A N++ + +SLP D+ NL NL    L  N L+  P+ +  +  L+ 
Sbjct: 120 LPDGFTQLRSLAHLALNDV-SLQSLPSDIGNLSNLVTLELRENVLKSVPMSLSFLVKLEQ 178

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           L LG+N L  +P  +  L  L  L L  N L+ +P   G+L +L  L +S+N+LE LPA 
Sbjct: 179 LDLGSNDLQVLPDTLGALPNLRELWLDRNQLSSLPSELGNLRRLVCLDVSENKLEQLPAE 238

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           IS L  L  LLL  N+L +LP+ +  LK LS     L +  N+L  L   I   + LSE+
Sbjct: 239 ISGLMSLTDLLLSQNQLSSLPSSLGQLKQLS----ILKVDQNRLTQLTESIGDCENLSEI 294

Query: 274 SLRDNPLVI 282
            L +N L +
Sbjct: 295 ILTENLLTV 303



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/201 (31%), Positives = 91/201 (45%), Gaps = 8/201 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTA 115
           N+  L L  N LS  P        L  LD+S N++  LP  I+    L+ L+   N L+ 
Sbjct: 198 NLRELWLDRNQLSSLPSELGNLRRLVCLDVSENKLEQLPAEISGLMSLTDLLLSQNQLS- 256

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLP  +  LK L +  +  N+L Q    I D   L  + L  N L  +P+ +  L KL 
Sbjct: 257 -SLPSSLGQLKQLSILKVDQNRLTQLTESIGDCENLSEIILTENLLTVLPKSMGNLTKLT 315

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L++  N L  +P   G    L  L L DNQL +LP  ++    L  L +  N+L  LP 
Sbjct: 316 NLNVDRNRLLSLPSEIGGCASLNVLSLRDNQLSALPPELAGATELHVLDVAGNRLLNLPF 375

Query: 236 EIITLKCLSEKLKSLLLHNNK 256
            +  L      LK+L L  N+
Sbjct: 376 ALTNL-----NLKALWLAENQ 391


>gi|126310265|ref|XP_001371328.1| PREDICTED: leucine-rich repeat-containing protein 1 [Monodelphis
           domestica]
          Length = 525

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 114/209 (54%), Gaps = 7/209 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ P++ ++   L+ LDL NN I +LP+ I     L  L    N L  
Sbjct: 153 NLASLELRENLLTYLPESLTQLQRLKELDLGNNEIYNLPETIGALIHLEDLWLDGNQLA- 211

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 212 -ELPQEIGNLKNLLCLDVSENKLERLPDEISGLASLTDLVISQNLLEVLPDGIGKLRKLS 270

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L    N L  + +  G+   L  L+L++NQL +LP SI  LK L +L    NKL +LP 
Sbjct: 271 ILKADQNRLVQLTEAVGECESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLVSLPK 330

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           EI    C S  L    + +N+L  +P+E+
Sbjct: 331 EIG--GCCS--LTVFSVRDNRLSRIPSEV 355



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 91/289 (31%), Positives = 122/289 (42%), Gaps = 65/289 (22%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNL--- 112
           ++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN +   
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEIPNE 97

Query: 113 -----------------------------------------LTAESLPKDMSNLKNLKVF 131
                                                    ++ +SLP+++ NL NL   
Sbjct: 98  VPERKTFCKSIKVSDLTEFFSFRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASL 157

Query: 132 NLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTF 191
            L  N L   P  +  +  LK L LGNN + ++P  I  L  L  L L GN L ++P   
Sbjct: 158 ELRENLLTYLPESLTQLQRLKELDLGNNEIYNLPETIGALIHLEDLWLDGNQLAELPQEI 217

Query: 192 GDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS------- 244
           G+L  L  L +S+N+LE LP  IS L  L  L++  N L  LP  I  L+ LS       
Sbjct: 218 GNLKNLLCLDVSENKLERLPDEISGLASLTDLVISQNLLEVLPDGIGKLRKLSILKADQN 277

Query: 245 ------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                       E L  L+L  N+L TLP  I  LK LS L+   N LV
Sbjct: 278 RLVQLTEAVGECESLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLV 326



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 102/224 (45%), Gaps = 14/224 (6%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN+    PE I  L+      L  N L+  P       NL  LD+S N++  LP  I+
Sbjct: 182 LGNNEIYNLPETIGALIHLEDLWLDGNQLAELPQEIGNLKNLLCLDVSENKLERLPDEIS 241

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L+ L+   NLL  E LP  +  L+ L +     N+L Q    + +  +L  L L  
Sbjct: 242 GLASLTDLVISQNLL--EVLPDGIGKLRKLSILKADQNRLVQLTEAVGECESLTELVLTE 299

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P+ I KL KL  L+   N L  +P   G    L    + DN+L  +P+ +S   
Sbjct: 300 NQLLTLPKSIGKLKKLSNLNADRNKLVSLPKEIGGCCSLTVFSVRDNRLSRIPSEVSQAT 359

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
            L  L +  N+L  LP  +  L     KLK+L L +N+ + L T
Sbjct: 360 ELHVLDVAGNRLLHLPLSLTNL-----KLKALWLSDNQSQPLLT 398



 Score = 47.4 bits (111), Expect = 0.013,   Method: Compositional matrix adjust.
 Identities = 51/174 (29%), Positives = 79/174 (45%), Gaps = 39/174 (22%)

Query: 160 SLNHVPREINKLCK-LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           SL +VP EI +  + L  L L  N L ++P+ F  L +L  L LSDN+++ LP  I+N  
Sbjct: 23  SLVYVPEEIYRYTRSLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFM 82

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLK-----------------------SLLLHNN 255
            L  L +  N+   +P E+   K   + +K                        L +++ 
Sbjct: 83  QLVELDVSRNE---IPNEVPERKTFCKSIKVSDLTEFFSFRLPESFPELQNLTCLSVNDI 139

Query: 256 KLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEID 309
            L++LP  I  L  L+ L LR+N L        TY P SL +L     ++ E+D
Sbjct: 140 SLQSLPENIGNLYNLASLELRENLL--------TYLPESLTQLQ----RLKELD 181


>gi|395225508|ref|ZP_10404030.1| Leucine Rich Repeat (LRR)-containing protein [Thiovulum sp. ES]
 gi|394446355|gb|EJF07187.1| Leucine Rich Repeat (LRR)-containing protein [Thiovulum sp. ES]
          Length = 411

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 86/223 (38%), Positives = 116/223 (52%), Gaps = 25/223 (11%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ +L L  NNL  FP                  +  LP  I N   L++L  RNN L 
Sbjct: 28  QNLTSLFLDRNNLKEFP------------------LKELPPEIGNLKNLTSLYFRNNDL- 68

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            + L  ++ NL+NL    LS N LE+ P +I ++  L  L L   +L  +P EI  L  L
Sbjct: 69  -KELSPEIGNLQNLTSLYLSHNNLEELPPEIGNLQNLTSLSLSFINLKELPPEIGNLQNL 127

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L GN+L ++P   G+L  L +L LS+N L+ LP  I NL+ L SL L NN L+ LP
Sbjct: 128 TELGLSGNNLKELPPEIGNLQNLTSLFLSNNNLKELPPEIGNLQNLTSLYLDNNNLKELP 187

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRD 277
            EI  L+     L+ L L NN L+ LP EI  L+ L+EL L D
Sbjct: 188 PEIGNLQN----LEVLRLDNNNLKELPPEIGNLQNLTELWLTD 226



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 73/179 (40%), Positives = 97/179 (54%), Gaps = 6/179 (3%)

Query: 104 STLIARNNL--LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
           S  + RNNL     + LP ++ NLKNL       N L++   +I ++  L  LYL +N+L
Sbjct: 32  SLFLDRNNLKEFPLKELPPEIGNLKNLTSLYFRNNDLKELSPEIGNLQNLTSLYLSHNNL 91

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +P EI  L  L  LSL   +L ++P   G+L  L  L LS N L+ LP  I NL+ L 
Sbjct: 92  EELPPEIGNLQNLTSLSLSFINLKELPPEIGNLQNLTELGLSGNNLKELPPEIGNLQNLT 151

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           SL L NN L+ LP EI  L+ L+    SL L NN L+ LP EI  L+ L  L L +N L
Sbjct: 152 SLFLSNNNLKELPPEIGNLQNLT----SLYLDNNNLKELPPEIGNLQNLEVLRLDNNNL 206



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/173 (35%), Positives = 92/173 (53%), Gaps = 1/173 (0%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           N+ +L   +N+L           NL SL LS+N +  LP  I N    T ++ +  +  +
Sbjct: 57  NLTSLYFRNNDLKELSPEIGNLQNLTSLYLSHNNLEELPPEIGNLQNLTSLSLS-FINLK 115

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            LP ++ NL+NL    LSGN L++ P +I ++  L  L+L NN+L  +P EI  L  L  
Sbjct: 116 ELPPEIGNLQNLTELGLSGNNLKELPPEIGNLQNLTSLFLSNNNLKELPPEIGNLQNLTS 175

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           L L  N+L ++P   G+L  LE L L +N L+ LP  I NL+ L  L L + K
Sbjct: 176 LYLDNNNLKELPPEIGNLQNLEVLRLDNNNLKELPPEIGNLQNLTELWLTDKK 228



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 65/165 (39%), Positives = 87/165 (52%), Gaps = 9/165 (5%)

Query: 121 DMSNLKNLKVFNLSGNQLEQFPI-----QILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           D  NL+NL    L  N L++FP+     +I ++  L  LY  NN L  +  EI  L  L 
Sbjct: 23  DWQNLQNLTSLFLDRNNLKEFPLKELPPEIGNLKNLTSLYFRNNDLKELSPEIGNLQNLT 82

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N+L ++P   G+L  L +L LS   L+ LP  I NL+ L  L L  N L+ LP 
Sbjct: 83  SLYLSHNNLEELPPEIGNLQNLTSLSLSFINLKELPPEIGNLQNLTELGLSGNNLKELPP 142

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI  L+ L+    SL L NN L+ LP EI  L+ L+ L L +N L
Sbjct: 143 EIGNLQNLT----SLFLSNNNLKELPPEIGNLQNLTSLYLDNNNL 183



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 84/155 (54%), Gaps = 5/155 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLL 113
           +N+ +L L HNNL   P       NL SL LS   +  LP  I N   L+ L ++ NNL 
Sbjct: 79  QNLTSLYLSHNNLEELPPEIGNLQNLTSLSLSFINLKELPPEIGNLQNLTELGLSGNNL- 137

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
             + LP ++ NL+NL    LS N L++ P +I ++  L  LYL NN+L  +P EI  L  
Sbjct: 138 --KELPPEIGNLQNLTSLFLSNNNLKELPPEIGNLQNLTSLYLDNNNLKELPPEIGNLQN 195

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLE 208
           L VL L  N+L ++P   G+L  L  L L+D + E
Sbjct: 196 LEVLRLDNNNLKELPPEIGNLQNLTELWLTDKKSE 230


>gi|158334565|ref|YP_001515737.1| hypothetical protein AM1_1392 [Acaryochloris marina MBIC11017]
 gi|158304806|gb|ABW26423.1| leucine-rich repeat-containing protein [Acaryochloris marina
           MBIC11017]
          Length = 305

 Score =  105 bits (261), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 122/226 (53%), Gaps = 8/226 (3%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLK 126
           L+  P    + + L+SLDLS N++  L   I     L  L    N L  ESLP ++  L 
Sbjct: 66  LTQVPPEIGQLSQLQSLDLSGNQLRQLTPEIGQLTQLQDLFLTQNQL--ESLPPEIGQLS 123

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL+     GNQL + P +I  +  L+ L+L  N L H+P EI +L  L  L +  N L  
Sbjct: 124 NLEWLQADGNQLSRLPKEIGQLSNLEMLWLRRNKLTHLPAEIGQLSALADLEIMDNQLQT 183

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P   G L QL++L + +N L SLPA+I  L  LK L L NN+ + LP+++     L   
Sbjct: 184 LPSELGRLTQLQSLKVQNNALSSLPATIVQLSSLKLLDLDNNQFKALPSQV----GLLNN 239

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKP 292
           L++L L +N+L+ LP+E+  LK L  L +RDN L  R   +MT  P
Sbjct: 240 LETLDLSDNQLKELPSELGQLKKLQLLVVRDNQLH-RLPPEMTKLP 284



 Score = 72.0 bits (175), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 70/209 (33%), Positives = 103/209 (49%), Gaps = 11/209 (5%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           +  L L  N L   P    + +NL  L    N+++ LP+ I     L  L  R N LT  
Sbjct: 102 LQDLFLTQNQLESLPPEIGQLSNLEWLQADGNQLSRLPKEIGQLSNLEMLWLRRNKLT-- 159

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            LP ++  L  L    +  NQL+  P ++  +  L+ L + NN+L+ +P  I +L  L +
Sbjct: 160 HLPAEIGQLSALADLEIMDNQLQTLPSELGRLTQLQSLKVQNNALSSLPATIVQLSSLKL 219

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N    +P   G L  LE L LSDNQL+ LP+ +  LK L+ L++ +N+L  LP E
Sbjct: 220 LDLDNNQFKALPSQVGLLNNLETLDLSDNQLKELPSELGQLKKLQLLVVRDNQLHRLPPE 279

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEII 265
           +  L     KL+  L  N     LP EI+
Sbjct: 280 MTKLP----KLRMFLSGN----PLPREIL 300



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 60/183 (32%), Positives = 90/183 (49%), Gaps = 7/183 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N++ L    N LS  P    + +NL  L L  N++THLP  I     L+ L   +N L  
Sbjct: 124 NLEWLQADGNQLSRLPKEIGQLSNLEMLWLRRNKLTHLPAEIGQLSALADLEIMDNQL-- 181

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++LP ++  L  L+   +  N L   P  I+ + +LK L L NN    +P ++  L  L 
Sbjct: 182 QTLPSELGRLTQLQSLKVQNNALSSLPATIVQLSSLKLLDLDNNQFKALPSQVGLLNNLE 241

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L ++P   G L +L+ L++ DNQL  LP  ++ L  L+  L  N     LP 
Sbjct: 242 TLDLSDNQLKELPSELGQLKKLQLLVVRDNQLHRLPPEMTKLPKLRMFLSGN----PLPR 297

Query: 236 EII 238
           EI+
Sbjct: 298 EIL 300


>gi|124006087|ref|ZP_01690923.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
 gi|123988264|gb|EAY27917.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
          Length = 387

 Score =  105 bits (261), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 82/262 (31%), Positives = 133/262 (50%), Gaps = 11/262 (4%)

Query: 56  ENIDTLLLYH---NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF--PLSTLIARN 110
           +N+D++ +        ++FP +  K  NL+ L++  + +  LP  I +    L  L  +N
Sbjct: 75  KNVDSVFVLDFPLKKFTYFPKDILKLRNLQVLEMVYSELDSLPPVIADSLDYLQVLNLKN 134

Query: 111 NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
           N LT  SLP +M+ +K L+  NL  N LE  P  + ++  L+ L +  N L+ +  +I  
Sbjct: 135 NKLT--SLPTEMAKMKYLRRLNLEYNLLEDIPDVMANMSGLRSLNIKFNRLSKISNKIGA 192

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           L +L  L L  N +T++P +FG L QL+ L L  N++ +LP S + L  LK L L  N+ 
Sbjct: 193 LTQLQTLDLTANGITNLPKSFGQLTQLQELNLQANRITTLPMSFTQLANLKKLNLRQNRF 252

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTY 290
           +  P+ I +L  L+    SL L  NK   +P+ I  L+ L EL+L+ N L         +
Sbjct: 253 KVFPSHIFSLNQLT----SLNLRKNKFSQIPSGITRLQQLEELNLQQNALSRLPTGIAAW 308

Query: 291 KPPSLLELASRTLKVHEIDYSQ 312
           K    L L+   L    ++ SQ
Sbjct: 309 KKMKKLNLSKNKLTNFPVEISQ 330



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 90/278 (32%), Positives = 124/278 (44%), Gaps = 20/278 (7%)

Query: 17  DSFKTVSIKTLDFSYSSLDS--ETLAT-----QIELLPNNDYNKKPENIDTLL------L 63
           D  K  +++ L+  YS LDS    +A      Q+  L NN     P  +  +       L
Sbjct: 96  DILKLRNLQVLEMVYSELDSLPPVIADSLDYLQVLNLKNNKLTSLPTEMAKMKYLRRLNL 155

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDM 122
            +N L   PD  +  + LRSL++  NR++ +   I     L TL    N +T  +LPK  
Sbjct: 156 EYNLLEDIPDVMANMSGLRSLNIKFNRLSKISNKIGALTQLQTLDLTANGIT--NLPKSF 213

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             L  L+  NL  N++   P+    +  LK L L  N     P  I  L +L  L+L  N
Sbjct: 214 GQLTQLQELNLQANRITTLPMSFTQLANLKKLNLRQNRFKVFPSHIFSLNQLTSLNLRKN 273

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
             + IP     L QLE L L  N L  LP  I+  K +K L L  NKL   P EI  L  
Sbjct: 274 KFSQIPSGITRLQQLEELNLQQNALSRLPTGIAAWKKMKKLNLSKNKLTNFPVEISQLSN 333

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L E    L L  N++ T+P  I  LK L  L++ +N L
Sbjct: 334 LEE----LNLSFNQISTIPANIGQLKKLKLLNVANNRL 367



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 42/130 (32%), Positives = 66/130 (50%), Gaps = 3/130 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L  N    FP +      L SL+L  N+ + +P  IT    L  L  + N L+ 
Sbjct: 241 NLKKLNLRQNRFKVFPSHIFSLNQLTSLNLRKNKFSQIPSGITRLQQLEELNLQQNALS- 299

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP  ++  K +K  NLS N+L  FP++I  +  L+ L L  N ++ +P  I +L KL 
Sbjct: 300 -RLPTGIAAWKKMKKLNLSKNKLTNFPVEISQLSNLEELNLSFNQISTIPANIGQLKKLK 358

Query: 176 VLSLGGNSLT 185
           +L++  N L+
Sbjct: 359 LLNVANNRLS 368


>gi|156717734|ref|NP_001096407.1| malignant fibrous histiocytoma-amplified sequence 1 homolog
           [Xenopus (Silurana) tropicalis]
 gi|160012388|sp|A4IIK1.1|MFHA1_XENTR RecName: Full=Malignant fibrous histiocytoma-amplified sequence 1
           homolog
 gi|134026210|gb|AAI36051.1| LOC100125009 protein [Xenopus (Silurana) tropicalis]
          Length = 997

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 119/226 (52%), Gaps = 6/226 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           +++ L +  N ++  PD      +LR+LDL +N +   PQ + + P L  L    N +  
Sbjct: 148 DLEELDVSFNQITHLPDTMQGLPSLRTLDLDHNELCSFPQQLFHVPALEELDFSGNKMLG 207

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLP+ + ++++LK+  LS   L   P  I ++  L+ L L NN+L+ +P     L KL 
Sbjct: 208 -SLPEGIRSMQSLKILWLSSTSLCLLPDSICELVNLESLMLDNNNLHTLPEGFGALQKLK 266

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L++  N+  D P     L  LE L +S N+L  LP  IS +  L +L L NN++R LP 
Sbjct: 267 MLNVSSNAFQDFPVPLLQLVDLEELYMSRNRLVVLPEVISCMTKLVTLWLDNNRIRYLPD 326

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            I+ L  L E    L+L  N++  LP +   L  ++   ++DNPL+
Sbjct: 327 SIVELSFLEE----LVLQGNQIAILPDDFGKLSKVNIWKIKDNPLI 368



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 80/282 (28%), Positives = 125/282 (44%), Gaps = 42/282 (14%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI---- 98
           +E +P+   +    N+  L+L  N     P        L  LD+S NR++ L +A+    
Sbjct: 65  LEEVPDGLQSLSAGNLHVLILRRNKFLNVPTAVYHLGRLTELDISYNRLSCLTEAVGLLG 124

Query: 99  -------TNFPLSTLIARNNLLT-----------AESLPKDMSNLKNLKVFNLSGNQLEQ 140
                  ++  L TL  +  +L               LP  M  L +L+  +L  N+L  
Sbjct: 125 KLKKLCLSHNQLRTLPRQLGMLVDLEELDVSFNQITHLPDTMQGLPSLRTLDLDHNELCS 184

Query: 141 FPIQILDIPTLKYL-YLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
           FP Q+  +P L+ L + GN  L  +P  I  +  L +L L   SL  +PD+  +L  LE+
Sbjct: 185 FPQQLFHVPALEELDFSGNKMLGSLPEGIRSMQSLKILWLSSTSLCLLPDSICELVNLES 244

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE-------------- 245
           L+L +N L +LP     L+ LK L + +N  +  P  ++ L  L E              
Sbjct: 245 LMLDNNNLHTLPEGFGALQKLKMLNVSSNAFQDFPVPLLQLVDLEELYMSRNRLVVLPEV 304

Query: 246 -----KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
                KL +L L NN++R LP  I+ L  L EL L+ N + I
Sbjct: 305 ISCMTKLVTLWLDNNRIRYLPDSIVELSFLEELVLQGNQIAI 346



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 69/241 (28%), Positives = 106/241 (43%), Gaps = 38/241 (15%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           V ++ LD S++         QI  LP  D  +   ++ TL L HN L  FP        L
Sbjct: 147 VDLEELDVSFN---------QITHLP--DTMQGLPSLRTLDLDHNELCSFPQQLFHVPAL 195

Query: 82  RSLDLSNNR-ITHLPQAITNFP------------------------LSTLIARNNLLTAE 116
             LD S N+ +  LP+ I +                          L +L+  NN L   
Sbjct: 196 EELDFSGNKMLGSLPEGIRSMQSLKILWLSSTSLCLLPDSICELVNLESLMLDNNNL--H 253

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LP+    L+ LK+ N+S N  + FP+ +L +  L+ LY+  N L  +P  I+ + KL  
Sbjct: 254 TLPEGFGALQKLKMLNVSSNAFQDFPVPLLQLVDLEELYMSRNRLVVLPEVISCMTKLVT 313

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N +  +PD+  +L  LE L+L  NQ+  LP     L  +    + +N L   P E
Sbjct: 314 LWLDNNRIRYLPDSIVELSFLEELVLQGNQIAILPDDFGKLSKVNIWKIKDNPLIQPPYE 373

Query: 237 I 237
           +
Sbjct: 374 V 374



 Score = 48.9 bits (115), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/185 (27%), Positives = 81/185 (43%), Gaps = 28/185 (15%)

Query: 123 SNLKNLKVFNLSGNQLEQFP--IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
           ++L +++V NL  N LE+ P  +Q L    L  L L  N   +VP  +  L +L  L + 
Sbjct: 50  ADLGDVEVLNLGNNSLEEVPDGLQSLSAGNLHVLILRRNKFLNVPTAVYHLGRLTELDIS 109

Query: 181 GNSLT-----------------------DIPDTFGDLYQLEALILSDNQLESLPASISNL 217
            N L+                        +P   G L  LE L +S NQ+  LP ++  L
Sbjct: 110 YNRLSCLTEAVGLLGKLKKLCLSHNQLRTLPRQLGMLVDLEELDVSFNQITHLPDTMQGL 169

Query: 218 KMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRD 277
             L++L L +N+L + P ++  +  L E   S    N  L +LP  I +++ L  L L  
Sbjct: 170 PSLRTLDLDHNELCSFPQQLFHVPALEELDFS---GNKMLGSLPEGIRSMQSLKILWLSS 226

Query: 278 NPLVI 282
             L +
Sbjct: 227 TSLCL 231


>gi|124003637|ref|ZP_01688486.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991206|gb|EAY30658.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 633

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 76/204 (37%), Positives = 109/204 (53%), Gaps = 9/204 (4%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI--ARNNLLTAESLPKDM 122
           +N L   P +  K  NL  L +  N++THLP  I N    +L+  + N L   + LPK +
Sbjct: 427 YNQLQVLPKSLGKLKNLHQLSVDGNKLTHLPPGIGNLHRLSLLNLSYNQL---QVLPKSL 483

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             LKNL   ++ GN+L + P  I D+  L  L L  N+L  +P  I +L K+  L+L GN
Sbjct: 484 GKLKNLHQLSVDGNKLTELPKIIYDLKKLFLLSLNYNALTALPESIGQLSKVVHLNLEGN 543

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            LT +P++ G L ++  L L  NQL  LP SI N++ L +L L NN+L  LP  I  L+ 
Sbjct: 544 QLTQLPESIGQLSKVVHLNLEGNQLTQLPKSIGNMRSLYALNLKNNQLTKLPQTIQKLRG 603

Query: 243 LSEKLKSLLLHNNKLRTLPTEIIT 266
               L+ LLL  N + T   + IT
Sbjct: 604 ----LRFLLLDKNPIPTHEKQRIT 623



 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 94/302 (31%), Positives = 136/302 (45%), Gaps = 72/302 (23%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF---------------- 101
           I TL L  N L+  P   ++ T+L+ L+L+NN++T  P AIT+                 
Sbjct: 167 IQTLCLQSNRLTEIPTEINQLTHLQELNLNNNQLTEFPLAITHLTTLKSLNLSGNKFHCV 226

Query: 102 --------PLSTLIARNNLLTA---------------------ESLPKDMSNLKNLKVFN 132
                    L T   +++ + A                     + LP+ M  LK +    
Sbjct: 227 PVNIGKLSKLVTFTLKSDRIKALPETMGTLSNLQNLTLSSCRIQQLPESMQQLKQIGKLA 286

Query: 133 LSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFG 192
           L  N++E+FP  I  + +L YL L  N L H+P  I  L KL  LSL  N L  +PD+ G
Sbjct: 287 LDNNRIEKFPAVITKLSSLVYLKLQKNQLKHLPESIGNLRKLSHLSLSNNHLKKLPDSIG 346

Query: 193 DLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP---TEIITLKCLS---EK 246
           +L QL  L ++ NQL++LPA+I  L  L+ L L  N+L  LP   T+I+TL  L     K
Sbjct: 347 NLAQLMVLSVARNQLDALPATIGKLSELRELNLEQNQLSCLPQQVTQILTLTQLKLTYNK 406

Query: 247 LKSL-------------LLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPP 293
           L  L              L  N+L+ LP  +  LK L +LS+  N L        T+ PP
Sbjct: 407 LTHLPPKLSNLQQLSLLNLSYNQLQVLPKSLGKLKNLHQLSVDGNKL--------THLPP 458

Query: 294 SL 295
            +
Sbjct: 459 GI 460



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 95/266 (35%), Positives = 121/266 (45%), Gaps = 38/266 (14%)

Query: 46  LPNNDYNKKPENIDTL--LLY----HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN   K P  I  L  L+Y     N L   P++      L  L LSNN +  LP +I 
Sbjct: 287 LDNNRIEKFPAVITKLSSLVYLKLQKNQLKHLPESIGNLRKLSHLSLSNNHLKKLPDSIG 346

Query: 100 NFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           N    +   +ARN L   ++LP  +  L  L+  NL  NQL   P Q+  I TL  L L 
Sbjct: 347 NLAQLMVLSVARNQL---DALPATIGKLSELRELNLEQNQLSCLPQQVTQILTLTQLKLT 403

Query: 158 NNSLNHVP-----------------------REINKLCKLHVLSLGGNSLTDIPDTFGDL 194
            N L H+P                       + + KL  LH LS+ GN LT +P   G+L
Sbjct: 404 YNKLTHLPPKLSNLQQLSLLNLSYNQLQVLPKSLGKLKNLHQLSVDGNKLTHLPPGIGNL 463

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
           ++L  L LS NQL+ LP S+  LK L  L +  NKL  LP  I  LK    KL  L L+ 
Sbjct: 464 HRLSLLNLSYNQLQVLPKSLGKLKNLHQLSVDGNKLTELPKIIYDLK----KLFLLSLNY 519

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPL 280
           N L  LP  I  L  +  L+L  N L
Sbjct: 520 NALTALPESIGQLSKVVHLNLEGNQL 545



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/199 (35%), Positives = 106/199 (53%), Gaps = 7/199 (3%)

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           +L+L    +  LP  +   P + TL  ++N LT   +P +++ L +L+  NL+ NQL +F
Sbjct: 146 TLNLLEFGLEKLPPLVFQIPKIQTLCLQSNRLT--EIPTEINQLTHLQELNLNNNQLTEF 203

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P+ I  + TLK L L  N  + VP  I KL KL   +L  + +  +P+T G L  L+ L 
Sbjct: 204 PLAITHLTTLKSLNLSGNKFHCVPVNIGKLSKLVTFTLKSDRIKALPETMGTLSNLQNLT 263

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           LS  +++ LP S+  LK +  L L NN++   P  I  L  L      L L  N+L+ LP
Sbjct: 264 LSSCRIQQLPESMQQLKQIGKLALDNNRIEKFPAVITKLSSLV----YLKLQKNQLKHLP 319

Query: 262 TEIITLKCLSELSLRDNPL 280
             I  L+ LS LSL +N L
Sbjct: 320 ESIGNLRKLSHLSLSNNHL 338


>gi|408490495|ref|YP_006866864.1| lipoprotein, leucine rich repeat protein [Psychroflexus torquis
           ATCC 700755]
 gi|408467770|gb|AFU68114.1| lipoprotein, leucine rich repeat protein [Psychroflexus torquis
           ATCC 700755]
          Length = 495

 Score =  104 bits (260), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 85/227 (37%), Positives = 117/227 (51%), Gaps = 17/227 (7%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTAESLPKDMSNLKNL 128
            P++    T+L+ L+L +N +T LP++I N   L  L + +NNL T   LP+ + NL  L
Sbjct: 246 LPESIGNLTSLKKLNLVSNNLTTLPESIGNLTSLEELYLGKNNLTT---LPESIGNLSRL 302

Query: 129 KVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
           K F    N+L   P  I ++ +L+ L+L    L  +P  I  L  L  L L  ++LT +P
Sbjct: 303 KTFFSGSNKLSVLPESIGNLTSLEELFLRETDLTTLPESIGNLISLERLYLNESNLTALP 362

Query: 189 DTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLK 248
            + G+L  LE L L  N+L +LP SI NL  L  L L  NKL TLP  I  L  L E   
Sbjct: 363 QSIGNLTSLEKLNLDGNRLTTLPESIGNLTRLDLLDLQGNKLTTLPESIGNLTSLDE--- 419

Query: 249 SLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
             +L+NN L  LP  I  L  LS L L        F +D+T  P S+
Sbjct: 420 -FILNNNALTVLPESIGNLIKLSALYL--------FGNDLTTLPESI 457



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/185 (35%), Positives = 103/185 (55%), Gaps = 3/185 (1%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAE 116
           ++ L L  NNL+  P++    + L++    +N+++ LP++I N   L  L  R   LT  
Sbjct: 279 LEELYLGKNNLTTLPESIGNLSRLKTFFSGSNKLSVLPESIGNLTSLEELFLRETDLT-- 336

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LP+ + NL +L+   L+ + L   P  I ++ +L+ L L  N L  +P  I  L +L +
Sbjct: 337 TLPESIGNLISLERLYLNESNLTALPQSIGNLTSLEKLNLDGNRLTTLPESIGNLTRLDL 396

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L GN LT +P++ G+L  L+  IL++N L  LP SI NL  L +L L  N L TLP  
Sbjct: 397 LDLQGNKLTTLPESIGNLTSLDEFILNNNALTVLPESIGNLIKLSALYLFGNDLTTLPES 456

Query: 237 IITLK 241
           I +LK
Sbjct: 457 IGSLK 461



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 73/212 (34%), Positives = 98/212 (46%), Gaps = 28/212 (13%)

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLK 129
           + P+     + L  LDLS    T LP++I                         NL +LK
Sbjct: 222 YLPEEIGSLSKLEELDLSQCGFTTLPESI------------------------GNLTSLK 257

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
             NL  N L   P  I ++ +L+ LYLG N+L  +P  I  L +L     G N L+ +P+
Sbjct: 258 KLNLVSNNLTTLPESIGNLTSLEELYLGKNNLTTLPESIGNLSRLKTFFSGSNKLSVLPE 317

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
           + G+L  LE L L +  L +LP SI NL  L+ L L+ + L  LP  I  L  L EKL  
Sbjct: 318 SIGNLTSLEELFLRETDLTTLPESIGNLISLERLYLNESNLTALPQSIGNLTSL-EKLN- 375

Query: 250 LLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             L  N+L TLP  I  L  L  L L+ N L 
Sbjct: 376 --LDGNRLTTLPESIGNLTRLDLLDLQGNKLT 405


>gi|116327760|ref|YP_797480.1| hypothetical protein LBL_1017 [Leptospira borgpetersenii serovar
           Hardjo-bovis str. L550]
 gi|116120504|gb|ABJ78547.1| Leucine-rich repeat containing protein [Leptospira borgpetersenii
           serovar Hardjo-bovis str. L550]
          Length = 677

 Score =  104 bits (259), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 75/227 (33%), Positives = 125/227 (55%), Gaps = 8/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ + L  N ++   +    F  ++ L L  NR+  L + I NFP L  L+   N L 
Sbjct: 436 KNLEKIDLARNVITGISNLTRAFVQVKELGLYENRLASL-EGIRNFPNLERLLVWQNEL- 493

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            E++P ++ +LK L   +LS N++   P    ++ ++K L LG N ++ +P+ + +   L
Sbjct: 494 -ETIPVEIVDLKKLIRIDLSKNRISNLPDLNAELESVKELSLGENRISKLPKSLVQFPNL 552

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L GN L ++ D FG+  +LE L LS N L SLP SI+ LK L+ L L NN+   +P
Sbjct: 553 ESLGLAGNQLEELSDLFGNFKKLEGLYLSSNGLVSLPMSIAQLKSLEDLSLKNNEFAEIP 612

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                +    +KLK L +++N++  LP  +  +K L EL + +NP+V
Sbjct: 613 ----EILKELKKLKELWMNDNRISELPEFLSEMKALRELKIGNNPVV 655



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 80/296 (27%), Positives = 128/296 (43%), Gaps = 66/296 (22%)

Query: 51  YNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSN-NRITHLPQAITNFPLSTLIAR 109
           Y+K  E+I  L     +LS    +   F NL+   LSN  +IT L               
Sbjct: 296 YSKGSESISVLEAEEIDLS----DIGLFENLKEFSLSNCKKITSL--------------- 336

Query: 110 NNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREIN 169
                     K +  LKN++  ++   QL +FP  +L I +L+ LY  +N     P   N
Sbjct: 337 ----------KSLCELKNIRTISIEEVQLTEFPDFLLGISSLRSLYFTDNG----PFTEN 382

Query: 170 K-----LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLL 224
           K        +  L L  N+L +IP+    L +L+ LI+ DNQL   P  +++LK L+ + 
Sbjct: 383 KTNLPDFSNVEKLCLNNNALGEIPEFVYRLSKLKELIIIDNQLIEFPERLADLKNLEKID 442

Query: 225 LHNN---KLRTLPTEIITLKCLS---------------EKLKSLLLHNNKLRTLPTEIIT 266
           L  N    +  L    + +K L                  L+ LL+  N+L T+P EI+ 
Sbjct: 443 LARNVITGISNLTRAFVQVKELGLYENRLASLEGIRNFPNLERLLVWQNELETIPVEIVD 502

Query: 267 LKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQY 322
           LK L  + L  N   I  + D+  +  S+ EL+    ++ +       LP++LVQ+
Sbjct: 503 LKKLIRIDLSKNR--ISNLPDLNAELESVKELSLGENRISK-------LPKSLVQF 549


>gi|359728058|ref|ZP_09266754.1| hypothetical protein Lwei2_14512 [Leptospira weilii str.
           2006001855]
          Length = 331

 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 83/204 (40%), Positives = 103/204 (50%), Gaps = 7/204 (3%)

Query: 78  FTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGN 136
           F NL    L+ N+IT LP+ I     L  L    N LT   LP ++  L+NLK   L  N
Sbjct: 65  FKNLEWFQLTGNQITTLPREIGTLTRLKGLYLAENQLTV--LPDEIGQLQNLKELFLFYN 122

Query: 137 QLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQ 196
            L   P  I ++  L+ L++ NN L  +P EI KL  L    L  N L ++P   G L  
Sbjct: 123 YLSYLPKLIGNLKALQELHIDNNKLEALPNEIGKLNNLQKFGLSHNRLKELPKEIGRLQN 182

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
           LE L L+ NQ  SLP  I  L  LK+L L +N L  LP EI  L     +L++L L  N 
Sbjct: 183 LEELNLNSNQFSSLPKEIGQLSNLKNLHLDHNMLANLPKEIGQLS----RLETLTLFRNS 238

Query: 257 LRTLPTEIITLKCLSELSLRDNPL 280
           L TLP EI  L  L EL L  NPL
Sbjct: 239 LETLPEEIGQLWNLRELDLSYNPL 262



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/257 (34%), Positives = 119/257 (46%), Gaps = 38/257 (14%)

Query: 25  KTLDFSYSSLDSETLATQIELLPN--------NDYNKKPENIDTL------LLYHNNLSF 70
           K LD  Y  L  E L+ +I L  N        N     P  I TL       L  N L+ 
Sbjct: 46  KVLDLQYQRL--EKLSKEIVLFKNLEWFQLTGNQITTLPREIGTLTRLKGLYLAENQLTV 103

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA-------------- 115
            PD   +  NL+ L L  N +++LP+ I N   L  L   NN L A              
Sbjct: 104 LPDEIGQLQNLKELFLFYNYLSYLPKLIGNLKALQELHIDNNKLEALPNEIGKLNNLQKF 163

Query: 116 -------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREI 168
                  + LPK++  L+NL+  NL+ NQ    P +I  +  LK L+L +N L ++P+EI
Sbjct: 164 GLSHNRLKELPKEIGRLQNLEELNLNSNQFSSLPKEIGQLSNLKNLHLDHNMLANLPKEI 223

Query: 169 NKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
            +L +L  L+L  NSL  +P+  G L+ L  L LS N L S+P  I  LK L+ L L   
Sbjct: 224 GQLSRLETLTLFRNSLETLPEEIGQLWNLRELDLSYNPLSSIPKEIGQLKNLRILHLRKT 283

Query: 229 KLRTLPTEIITLKCLSE 245
            L  LP EI  L+ L E
Sbjct: 284 PLARLPDEIGELQDLEE 300



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 80/150 (53%), Gaps = 4/150 (2%)

Query: 129 KVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
           KV +L   +LE+   +I+    L++  L  N +  +PREI  L +L  L L  N LT +P
Sbjct: 46  KVLDLQYQRLEKLSKEIVLFKNLEWFQLTGNQITTLPREIGTLTRLKGLYLAENQLTVLP 105

Query: 189 DTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLK 248
           D  G L  L+ L L  N L  LP  I NLK L+ L + NNKL  LP EI  L      L+
Sbjct: 106 DEIGQLQNLKELFLFYNYLSYLPKLIGNLKALQELHIDNNKLEALPNEIGKLN----NLQ 161

Query: 249 SLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
              L +N+L+ LP EI  L+ L EL+L  N
Sbjct: 162 KFGLSHNRLKELPKEIGRLQNLEELNLNSN 191


>gi|357627630|gb|EHJ77268.1| putative shoc2 [Danaus plexippus]
          Length = 567

 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 89/243 (36%), Positives = 129/243 (53%), Gaps = 11/243 (4%)

Query: 58  IDTLLLYHNNLSFFPDNA-SKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLT 114
           + +L L  N+   +P    ++FT++ S++L +N+I  +P  I +    L+ LI + NLLT
Sbjct: 319 LTSLTLSRNSFMSYPSGGPAQFTSVSSINLEHNQIDKIPYGIFSRAKNLTKLIMKENLLT 378

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLP D+    N+   NL  NQL + P  I  +  L+ L L NN L  +P  I  L KL
Sbjct: 379 --SLPLDIGTWTNMVELNLGTNQLVKLPDDIQSLINLEVLILSNNLLKRIPPSIGNLRKL 436

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N +  +P+  G L +L+ LI+  NQL SLP SI +L  L  L +  N L+ LP
Sbjct: 437 RVLDLEENKIEILPNEIGFLQELKKLIVQSNQLTSLPRSIGHLINLTYLSVGENNLQYLP 496

Query: 235 TEIITLKCLSEKLKSLLLHNN-KLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPP 293
            EI TL    E L+SL L++N  L  LP E+     L  +S+ + PL      D+    P
Sbjct: 497 EEIGTL----ENLESLYLNDNPNLCNLPFELALCVSLQIMSIENCPLT-SLPPDVVSSGP 551

Query: 294 SLL 296
           SL+
Sbjct: 552 SLV 554



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 109/207 (52%), Gaps = 6/207 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ TL L  N+L+  PD+ +   +L+ LDL +N+++ +P+ +     L+TL  R N +  
Sbjct: 133 NLQTLALNENSLTSLPDSLAHLRSLKVLDLRHNKLSDIPEVVYKLTSLTTLFLRFNRIRV 192

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +   ++NL NL + +L  N++++    I  +  L    + +N L H+P+EI     L 
Sbjct: 193 --VGDGIANLTNLTMLSLRENKIKELSSGIGKLVNLVTFDVSHNHLEHLPQEIGNCVNLS 250

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L DIPDT G+L  L  + L  N+L ++PAS+SN K +    +  N +  LP 
Sbjct: 251 TLDLQHNELLDIPDTIGNLQALNRIGLRYNRLNAIPASLSNCKHMDEFNVEGNSISQLPD 310

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPT 262
            ++   C   +L SL L  N   + P+
Sbjct: 311 GLL---CSLTELTSLTLSRNSFMSYPS 334



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/200 (32%), Positives = 112/200 (56%), Gaps = 5/200 (2%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           QI+ +P   +++  +N+  L++  N L+  P +   +TN+  L+L  N++  LP  I + 
Sbjct: 352 QIDKIPYGIFSRA-KNLTKLIMKENLLTSLPLDIGTWTNMVELNLGTNQLVKLPDDIQSL 410

Query: 102 -PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
             L  LI  NNLL  + +P  + NL+ L+V +L  N++E  P +I  +  LK L + +N 
Sbjct: 411 INLEVLILSNNLL--KRIPPSIGNLRKLRVLDLEENKIEILPNEIGFLQELKKLIVQSNQ 468

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDN-QLESLPASISNLKM 219
           L  +PR I  L  L  LS+G N+L  +P+  G L  LE+L L+DN  L +LP  ++    
Sbjct: 469 LTSLPRSIGHLINLTYLSVGENNLQYLPEEIGTLENLESLYLNDNPNLCNLPFELALCVS 528

Query: 220 LKSLLLHNNKLRTLPTEIIT 239
           L+ + + N  L +LP ++++
Sbjct: 529 LQIMSIENCPLTSLPPDVVS 548



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 57/165 (34%), Positives = 81/165 (49%), Gaps = 4/165 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           SLP ++ +L +L  F L GN+L   P +   +  L+ L L  NSL  +P  +  L  L V
Sbjct: 100 SLPPNVRDLTHLVEFYLYGNKLVALPAEFGCLTNLQTLALNENSLTSLPDSLAHLRSLKV 159

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L+DIP+    L  L  L L  N++  +   I+NL  L  L L  NK++ L + 
Sbjct: 160 LDLRHNKLSDIPEVVYKLTSLTTLFLRFNRIRVVGDGIANLTNLTMLSLRENKIKELSSG 219

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I  L      L +  + +N L  LP EI     LS L L+ N L+
Sbjct: 220 IGKLV----NLVTFDVSHNHLEHLPQEIGNCVNLSTLDLQHNELL 260



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 11/164 (6%)

Query: 34  LDSETLATQIEL-LPNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           LD  T    +EL L  N   K P+      N++ L+L +N L   P +      LR LDL
Sbjct: 382 LDIGTWTNMVELNLGTNQLVKLPDDIQSLINLEVLILSNNLLKRIPPSIGNLRKLRVLDL 441

Query: 87  SNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI 145
             N+I  LP  I     L  LI ++N LT  SLP+ + +L NL   ++  N L+  P +I
Sbjct: 442 EENKIEILPNEIGFLQELKKLIVQSNQLT--SLPRSIGHLINLTYLSVGENNLQYLPEEI 499

Query: 146 LDIPTLKYLYLGNN-SLNHVPREINKLCKLHVLSLGGNSLTDIP 188
             +  L+ LYL +N +L ++P E+     L ++S+    LT +P
Sbjct: 500 GTLENLESLYLNDNPNLCNLPFELALCVSLQIMSIENCPLTSLP 543


>gi|418695046|ref|ZP_13256072.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
 gi|409957205|gb|EKO16120.1| leucine rich repeat protein [Leptospira kirschneri str. H1]
          Length = 525

 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 83/229 (36%), Positives = 118/229 (51%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L L    L+  P    +  NLR L L  N++  LP+ I     L  L    N L
Sbjct: 47  PLDVRVLNLNGQKLTSLPREIGQLKNLRELSLKWNQLVTLPKEIVELQNLEHLDLSENQL 106

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  LKNL+  +L  N+L   P +I  +  L+ L+   N L  +P+EI +L  
Sbjct: 107 VI--LPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPKEIGQLEN 164

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N LT +P   G L  L+ L LS NQL +LP  I  L+ L+ L L  N+L TL
Sbjct: 165 LENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVTL 224

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P  I  L    + L++L LH N+L  LP E   L+ L +L+L +N L+I
Sbjct: 225 PKGIGRL----QNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLII 269



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/210 (38%), Positives = 109/210 (51%), Gaps = 7/210 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L   P    +  NL  LDLS N++  LP  I     L +L    N LT
Sbjct: 71  KNLRELSLKWNQLVTLPKEIVELQNLEHLDLSENQLVILPNEIGRLKNLQSLDLYKNKLT 130

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL++     N+L   P +I  +  L+ L L  N L  VP+EI +L  L
Sbjct: 131 --TLPKEIGQLQNLQMLWSPENRLAILPKEIGQLENLENLNLSENRLTTVPKEIGQLKNL 188

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L GN L  +P+  G L  L+ L L  NQL +LP  I  L+ L++L LH N+L  LP
Sbjct: 189 QELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVTLPKGIGRLQNLQTLDLHENRLTILP 248

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
            E   L+     L+ L L NN+L  LP EI
Sbjct: 249 REFGQLQS----LQKLNLVNNRLIILPKEI 274



 Score = 99.4 bits (246), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 104/188 (55%), Gaps = 5/188 (2%)

Query: 94  LPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKY 153
           L +A+ N PL   +   N     SLP+++  LKNL+  +L  NQL   P +I+++  L++
Sbjct: 40  LTKALQN-PLDVRVLNLNGQKLTSLPREIGQLKNLRELSLKWNQLVTLPKEIVELQNLEH 98

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           L L  N L  +P EI +L  L  L L  N LT +P   G L  L+ L   +N+L  LP  
Sbjct: 99  LDLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPKE 158

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           I  L+ L++L L  N+L T+P EI  LK L E    L L  N+L TLP EI  L+ L EL
Sbjct: 159 IGQLENLENLNLSENRLTTVPKEIGQLKNLQE----LHLSGNQLVTLPNEIGQLRNLQEL 214

Query: 274 SLRDNPLV 281
           +L+ N LV
Sbjct: 215 NLKWNQLV 222



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 90/168 (53%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NL+G +L   P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 36  TYMDLTKALQNPLDVRVLNLNGQKLTSLPREIGQLKNLRELSLKWNQLVTLPKEIVELQN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L  +P+  G L  L++L L  N+L +LP  I  L+ L+ L    N+L  L
Sbjct: 96  LEHLDLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAIL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L    E L++L L  N+L T+P EI  LK L EL L  N LV
Sbjct: 156 PKEIGQL----ENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLV 199



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 104/257 (40%), Gaps = 61/257 (23%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN--------------- 100
           +N+ TL L+ N L+  P    +  +L+ L+L NNR+  LP+ I                 
Sbjct: 232 QNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLIILPKEIGQLQNLQDLDLLMNPLS 291

Query: 101 ----------FPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ------FPIQ 144
                     FP   L  R      +    +++  + LKVF LS   LE       FP  
Sbjct: 292 FKERKRIQKLFPNCNLDLREVAKDGDYRNLNLAQEEPLKVFELS---LEYKDFSHLFPKV 348

Query: 145 ILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD 204
           IL    L+ L+L +     +P+EI +L  L  L+LG N L DIP   G L  LEAL L  
Sbjct: 349 ILKFRNLQSLHLYDCGFPTLPKEIGRLKNLKYLALGLNGLKDIPSEIGQLRNLEALNLEA 408

Query: 205 NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           N LE LP  I  L+                            L+ L LH NKL+  P  I
Sbjct: 409 NVLEGLPKEIGQLR---------------------------NLQKLSLHQNKLKIFPVGI 441

Query: 265 ITLKCLSELSLRDNPLV 281
             LK L  L L  N L+
Sbjct: 442 GQLKSLQWLDLSANELI 458



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 70/168 (41%), Gaps = 47/168 (27%)

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLK 129
            FP    KF NL+SL L +            FP              +LPK++  LKN  
Sbjct: 344 LFPKVILKFRNLQSLHLYD----------CGFP--------------TLPKEIGRLKN-- 377

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
                                LKYL LG N L  +P EI +L  L  L+L  N L  +P 
Sbjct: 378 ---------------------LKYLALGLNGLKDIPSEIGQLRNLEALNLEANVLEGLPK 416

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
             G L  L+ L L  N+L+  P  I  LK L+ L L  N+L TLP EI
Sbjct: 417 EIGQLRNLQKLSLHQNKLKIFPVGIGQLKSLQWLDLSANELITLPKEI 464



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 116/255 (45%), Gaps = 36/255 (14%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           EN++ L L  N L+  P    +  NL+ L LS N++  LP  I     L  L  + N L 
Sbjct: 163 ENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLV 222

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK +  L+NL+  +L  N+L   P +   + +L+ L L NN L  +P+EI +L  L
Sbjct: 223 --TLPKGIGRLQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLIILPKEIGQLQNL 280

Query: 175 HVLSLGGNSLT----------------DIPDTFGD-------LYQLEALILSDNQLES-- 209
             L L  N L+                D+ +   D       L Q E L + +  LE   
Sbjct: 281 QDLDLLMNPLSFKERKRIQKLFPNCNLDLREVAKDGDYRNLNLAQEEPLKVFELSLEYKD 340

Query: 210 ----LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
                P  I   + L+SL L++    TLP EI  LK     LK L L  N L+ +P+EI 
Sbjct: 341 FSHLFPKVILKFRNLQSLHLYDCGFPTLPKEIGRLK----NLKYLALGLNGLKDIPSEIG 396

Query: 266 TLKCLSELSLRDNPL 280
            L+ L  L+L  N L
Sbjct: 397 QLRNLEALNLEANVL 411



 Score = 46.6 bits (109), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 4/109 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+     +   +  L L+  +L SLP  I  LK L+ L L  N+L 
Sbjct: 25  CEIQAEEVEPGTYMDLTKALQNPLDVRVLNLNGQKLTSLPREIGQLKNLRELSLKWNQLV 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           TLP EI+ L    + L+ L L  N+L  LP EI  LK L  L L  N L
Sbjct: 85  TLPKEIVEL----QNLEHLDLSENQLVILPNEIGRLKNLQSLDLYKNKL 129


>gi|421106546|ref|ZP_15567112.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
 gi|410008404|gb|EKO62075.1| leucine rich repeat protein [Leptospira kirschneri str. H2]
          Length = 525

 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 83/229 (36%), Positives = 118/229 (51%), Gaps = 7/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L L    L+  P    +  NLR L L  N++  LP+ I     L  L    N L
Sbjct: 47  PLDVRVLNLNGQKLTSLPREIGQLKNLRELSLKWNQLVTLPKEIVELQNLEHLDLSENQL 106

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  LKNL+  +L  N+L   P +I  +  L+ L+   N L  +P+EI +L  
Sbjct: 107 VI--LPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPKEIGQLEN 164

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N LT +P   G L  L+ L LS NQL +LP  I  L+ L+ L L  N+L TL
Sbjct: 165 LENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVTL 224

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P  I  L    + L++L LH N+L  LP E   L+ L +L+L +N L+I
Sbjct: 225 PKGIGRL----QNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLII 269



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/210 (38%), Positives = 109/210 (51%), Gaps = 7/210 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L   P    +  NL  LDLS N++  LP  I     L +L    N LT
Sbjct: 71  KNLRELSLKWNQLVTLPKEIVELQNLEHLDLSENQLVILPNEIGRLKNLQSLDLYKNKLT 130

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK++  L+NL++     N+L   P +I  +  L+ L L  N L  VP+EI +L  L
Sbjct: 131 --TLPKEIGQLQNLQMLWSPENRLAILPKEIGQLENLENLNLSENRLTTVPKEIGQLKNL 188

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L GN L  +P+  G L  L+ L L  NQL +LP  I  L+ L++L LH N+L  LP
Sbjct: 189 QELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLVTLPKGIGRLQNLQTLDLHENRLTILP 248

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
            E   L+     L+ L L NN+L  LP EI
Sbjct: 249 REFGQLQS----LQKLNLVNNRLIILPKEI 274



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 104/188 (55%), Gaps = 5/188 (2%)

Query: 94  LPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKY 153
           L +A+ N PL   +   N     SLP+++  LKNL+  +L  NQL   P +I+++  L++
Sbjct: 40  LTKALQN-PLDVRVLNLNGQKLTSLPREIGQLKNLRELSLKWNQLVTLPKEIVELQNLEH 98

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           L L  N L  +P EI +L  L  L L  N LT +P   G L  L+ L   +N+L  LP  
Sbjct: 99  LDLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAILPKE 158

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           I  L+ L++L L  N+L T+P EI  LK L E    L L  N+L TLP EI  L+ L EL
Sbjct: 159 IGQLENLENLNLSENRLTTVPKEIGQLKNLQE----LHLSGNQLVTLPNEIGQLRNLQEL 214

Query: 274 SLRDNPLV 281
           +L+ N LV
Sbjct: 215 NLKWNQLV 222



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/168 (38%), Positives = 90/168 (53%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NL+G +L   P +I  +  L+ L L  N L  +P+EI +L  
Sbjct: 36  TYMDLTKALQNPLDVRVLNLNGQKLTSLPREIGQLKNLRELSLKWNQLVTLPKEIVELQN 95

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L  +P+  G L  L++L L  N+L +LP  I  L+ L+ L    N+L  L
Sbjct: 96  LEHLDLSENQLVILPNEIGRLKNLQSLDLYKNKLTTLPKEIGQLQNLQMLWSPENRLAIL 155

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P EI  L    E L++L L  N+L T+P EI  LK L EL L  N LV
Sbjct: 156 PKEIGQL----ENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLV 199



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 78/257 (30%), Positives = 104/257 (40%), Gaps = 61/257 (23%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN--------------- 100
           +N+ TL L+ N L+  P    +  +L+ L+L NNR+  LP+ I                 
Sbjct: 232 QNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLIILPKEIGQLQNLQDLDLLMNPLS 291

Query: 101 ----------FPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ------FPIQ 144
                     FP   L  R      +    +++  + LKVF LS   LE       FP  
Sbjct: 292 FKERKRIQKLFPNCNLDLREVAKDGDYRNLNLAQEEPLKVFELS---LEYKDFSHLFPKV 348

Query: 145 ILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD 204
           IL    L+ L+L +     +P+EI +L  L  L+LG N L DIP   G L  LEAL L  
Sbjct: 349 ILKFRNLQSLHLYDCGFPTLPKEIGRLKNLKYLTLGLNGLKDIPSEIGQLRNLEALNLEA 408

Query: 205 NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           N LE LP  I  L+                            L+ L LH NKL+  P  I
Sbjct: 409 NVLEGLPKEIGQLR---------------------------NLQKLSLHQNKLKIFPVGI 441

Query: 265 ITLKCLSELSLRDNPLV 281
             LK L  L L  N L+
Sbjct: 442 GQLKSLQWLDLSANELI 458



 Score = 65.5 bits (158), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 70/168 (41%), Gaps = 47/168 (27%)

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLK 129
            FP    KF NL+SL L +            FP              +LPK++  LKN  
Sbjct: 344 LFPKVILKFRNLQSLHLYD----------CGFP--------------TLPKEIGRLKN-- 377

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
                                LKYL LG N L  +P EI +L  L  L+L  N L  +P 
Sbjct: 378 ---------------------LKYLTLGLNGLKDIPSEIGQLRNLEALNLEANVLEGLPK 416

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
             G L  L+ L L  N+L+  P  I  LK L+ L L  N+L TLP EI
Sbjct: 417 EIGQLRNLQKLSLHQNKLKIFPVGIGQLKSLQWLDLSANELITLPKEI 464



 Score = 60.5 bits (145), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 81/255 (31%), Positives = 116/255 (45%), Gaps = 36/255 (14%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           EN++ L L  N L+  P    +  NL+ L LS N++  LP  I     L  L  + N L 
Sbjct: 163 ENLENLNLSENRLTTVPKEIGQLKNLQELHLSGNQLVTLPNEIGQLRNLQELNLKWNQLV 222

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LPK +  L+NL+  +L  N+L   P +   + +L+ L L NN L  +P+EI +L  L
Sbjct: 223 --TLPKGIGRLQNLQTLDLHENRLTILPREFGQLQSLQKLNLVNNRLIILPKEIGQLQNL 280

Query: 175 HVLSLGGNSLT----------------DIPDTFGD-------LYQLEALILSDNQLES-- 209
             L L  N L+                D+ +   D       L Q E L + +  LE   
Sbjct: 281 QDLDLLMNPLSFKERKRIQKLFPNCNLDLREVAKDGDYRNLNLAQEEPLKVFELSLEYKD 340

Query: 210 ----LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
                P  I   + L+SL L++    TLP EI  LK     LK L L  N L+ +P+EI 
Sbjct: 341 FSHLFPKVILKFRNLQSLHLYDCGFPTLPKEIGRLK----NLKYLTLGLNGLKDIPSEIG 396

Query: 266 TLKCLSELSLRDNPL 280
            L+ L  L+L  N L
Sbjct: 397 QLRNLEALNLEANVL 411



 Score = 46.6 bits (109), Expect = 0.024,   Method: Compositional matrix adjust.
 Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 4/109 (3%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           C++    +   +  D+     +   +  L L+  +L SLP  I  LK L+ L L  N+L 
Sbjct: 25  CEIQAEEVEPGTYMDLTKALQNPLDVRVLNLNGQKLTSLPREIGQLKNLRELSLKWNQLV 84

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           TLP EI+ L    + L+ L L  N+L  LP EI  LK L  L L  N L
Sbjct: 85  TLPKEIVEL----QNLEHLDLSENQLVILPNEIGRLKNLQSLDLYKNKL 129


>gi|194211220|ref|XP_001498327.2| PREDICTED: leucine-rich repeat-containing protein 40-like [Equus
           caballus]
          Length = 803

 Score =  104 bits (259), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 87/224 (38%), Positives = 124/224 (55%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSF-FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           N+D     + NLSF   +   + T+L  L +SNN++  L   +   P L+ L   +N LT
Sbjct: 260 NVDIPEEANQNLSFSAAERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLT 319

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLP  +  L+NL+  N+S N+L+  P +I ++  LK LYL +N L  +P    +L  L
Sbjct: 320 --SLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKGLYLQHNELTCLPEGFEQLFSL 377

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P +F  L  L  L LS NQL+SLPA IS +K LK L  ++N L T+P
Sbjct: 378 EDLDLSNNRLTIVPASFSSLSSLVRLNLSSNQLKSLPAEISGMKRLKHLDCNSNLLETIP 437

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            E+ ++    E L+ L L  NKLR LP E  + K L EL + +N
Sbjct: 438 PELASM----ESLELLYLRRNKLRFLP-EFPSCKLLKELHVGEN 476



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 82/229 (35%), Positives = 120/229 (52%), Gaps = 14/229 (6%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLT 114
           EN+  L + HN L   P+  +   NL+ L L +N +T LP+     F L  L   NN LT
Sbjct: 329 ENLQKLNVSHNKLKILPEEITNLRNLKGLYLQHNELTCLPEGFEQLFSLEDLDLSNNRLT 388

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P   S+L +L   NLS NQL+  P +I  +  LK+L   +N L  +P E+  +  L
Sbjct: 389 I--VPASFSSLSSLVRLNLSSNQLKSLPAEISGMKRLKHLDCNSNLLETIPPELASMESL 446

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLL---LHNNKLR 231
            +L L  N L  +P+ F     L+ L + +NQ+E L A   +LK L S+L   L +NKL+
Sbjct: 447 ELLYLRRNKLRFLPE-FPSCKLLKELHVGENQIEMLGA--EHLKHLNSILVLDLRDNKLK 503

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           ++P EI  L+     L+ L L NN + +LP  +  L  L  L+L  NPL
Sbjct: 504 SVPDEITLLQS----LERLDLSNNDISSLPYSLGKLH-LKFLALEGNPL 547



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 93/272 (34%), Positives = 133/272 (48%), Gaps = 49/272 (18%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           ++++LP    N +  N+  L L HN L+  P+   +  +L  LDLSNNR+T +P + ++ 
Sbjct: 340 KLKILPEEITNLR--NLKGLYLQHNELTCLPEGFEQLFSLEDLDLSNNRLTIVPASFSS- 396

Query: 102 PLSTLIARNNLLTAE--SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
            LS+L+ R NL + +  SLP ++S +K LK  + + N LE  P ++  + +L+ LYL  N
Sbjct: 397 -LSSLV-RLNLSSNQLKSLPAEISGMKRLKHLDCNSNLLETIPPELASMESLELLYLRRN 454

Query: 160 SLNHVPR---------------EINKLCKLH--------VLSLGGNSLTDIPDTFGDLYQ 196
            L  +P                +I  L   H        VL L  N L  +PD    L  
Sbjct: 455 KLRFLPEFPSCKLLKELHVGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQS 514

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII------TLKCLSEKLK-S 249
           LE L LS+N + SLP S+  L  LK L L  N LRT+  EII       LK L  K+K  
Sbjct: 515 LERLDLSNNDISSLPYSLGKLH-LKFLALEGNPLRTIRREIINKGTQEVLKYLQSKIKDD 573

Query: 250 LLLHNNKLR----TLPTE-------IITLKCL 270
               NN +     TLP+E       I+TLK L
Sbjct: 574 EPSQNNSVTETAMTLPSESRVNVHSIVTLKIL 605



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 105/210 (50%), Gaps = 11/210 (5%)

Query: 74  NASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE--SLPKDMSNLKNL-KV 130
           N      L+ LD S+ +   +P  + +   S ++   N    +   +PK +  LK +   
Sbjct: 595 NVHSIVTLKILDYSDKQAVLIPDEVFDAVKSNIVTSVNFSKNQLCEIPKRIIELKEMVSD 654

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NLS N+L    +++  +  L +L L NN LN +P E+  L +L  ++L  N    +P+ 
Sbjct: 655 VNLSFNKLSFVSLELCTLQKLTFLDLRNNFLNSLPEEMESLIRLQTINLSFNRFKILPEV 714

Query: 191 FGDLYQLEALILSDNQLESL-PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
              +  LE +++S+NQ+ S+ P  +  ++ L +L L NN L  +P E+    C++  L++
Sbjct: 715 LYRIPTLETILISNNQVGSVDPQKMKTMENLITLDLQNNDLLQIPPELGN--CVN--LRT 770

Query: 250 LLLHNNKLRTLPTEIITLKCLSEL--SLRD 277
           LLL  N  R +P   I +K  + +   LRD
Sbjct: 771 LLLDGNPFR-VPRAAILMKGTAAILEYLRD 799



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 82/302 (27%), Positives = 128/302 (42%), Gaps = 55/302 (18%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           QIE+L   ++ K   +I  L L  N L   PD  +   +L  LDLSNN I+ LP ++   
Sbjct: 477 QIEML-GAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGKL 535

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPT---LKYLYLG- 157
                                    +LK   L GN L     +I++  T   LKYL    
Sbjct: 536 -------------------------HLKFLALEGNPLRTIRREIINKGTQEVLKYLQSKI 570

Query: 158 -------NNSLNH----VPRE----INKLCKLHVLSLGGNSLTDIPDTFGDLYQ---LEA 199
                  NNS+      +P E    ++ +  L +L         IPD   D  +   + +
Sbjct: 571 KDDEPSQNNSVTETAMTLPSESRVNVHSIVTLKILDYSDKQAVLIPDEVFDAVKSNIVTS 630

Query: 200 LILSDNQLESLPASISNLK-MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
           +  S NQL  +P  I  LK M+  + L  NKL  +  E+ TL    +KL  L L NN L 
Sbjct: 631 VNFSKNQLCEIPKRIIELKEMVSDVNLSFNKLSFVSLELCTL----QKLTFLDLRNNFLN 686

Query: 259 TLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQN 318
           +LP E+ +L  L  ++L  N    + + ++ Y+ P+L  +     +V  +D  +    +N
Sbjct: 687 SLPEEMESLIRLQTINLSFN--RFKILPEVLYRIPTLETILISNNQVGSVDPQKMKTMEN 744

Query: 319 LV 320
           L+
Sbjct: 745 LI 746



 Score = 42.4 bits (98), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 3/105 (2%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L +N L+  P+       L++++LS NR   LP+ +   P L T++  NN + +   P+ 
Sbjct: 680 LRNNFLNSLPEEMESLIRLQTINLSFNRFKILPEVLYRIPTLETILISNNQVGSVD-PQK 738

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPR 166
           M  ++NL   +L  N L Q P ++ +   L+ L L  N    VPR
Sbjct: 739 MKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPF-RVPR 782


>gi|149173780|ref|ZP_01852409.1| putative lipoprotein [Planctomyces maris DSM 8797]
 gi|148847310|gb|EDL61644.1| putative lipoprotein [Planctomyces maris DSM 8797]
          Length = 470

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 83/224 (37%), Positives = 114/224 (50%), Gaps = 7/224 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           EN+  L L  N+++  P    K   L SL ++ N +  +  +I     L  L A  N + 
Sbjct: 159 ENLRDLNLDSNSIASLPPVFEKLHQLNSLSMNGNEMVTVTDSIGGLKKLRYLYALKNRI- 217

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            + LP  + NL+NL+  +L  NQ+E  P +I ++  LK L L  N L  +P EI KL  L
Sbjct: 218 -KELPPQIGNLENLETLDLRENQIEFLPSEIGNLRNLKRLDLFKNHLTSLPPEIGKLKNL 276

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P  FGDL  LE L L +N L S+PASI  LK +  L L +N+L +LP
Sbjct: 277 KDLDLMHNDLTSLPKEFGDLTGLEKLSLQNNNLTSIPASIIRLKKIPELYLQSNQLSSLP 336

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            E      L      L L  N+  ++P EI  L+ L  LS  DN
Sbjct: 337 PEFGNHLSLG----GLFLDQNQFTSIPPEIWKLQNLERLSFADN 376



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/213 (38%), Positives = 106/213 (49%), Gaps = 7/213 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N +   P       NL +LDL  N+I  LP  I N   L  L    N LT  SLP ++  
Sbjct: 215 NRIKELPPQIGNLENLETLDLRENQIEFLPSEIGNLRNLKRLDLFKNHLT--SLPPEIGK 272

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           LKNLK  +L  N L   P +  D+  L+ L L NN+L  +P  I +L K+  L L  N L
Sbjct: 273 LKNLKDLDLMHNDLTSLPKEFGDLTGLEKLSLQNNNLTSIPASIIRLKKIPELYLQSNQL 332

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           + +P  FG+   L  L L  NQ  S+P  I  L+ L+ L   +N++  LP EI  LK   
Sbjct: 333 SSLPPEFGNHLSLGGLFLDQNQFTSIPPEIWKLQNLERLSFADNQITELPAEIGRLK--- 389

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRD 277
            KL+SL L  N ++ LP EI  L  LS  S  D
Sbjct: 390 -KLRSLDLIGNPIKQLPPEISQLTSLSSFSFDD 421



 Score =  100 bits (248), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/190 (38%), Positives = 94/190 (49%), Gaps = 3/190 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           EN++TL L  N + F P       NL+ LDL  N +T LP  I     L  L   +N LT
Sbjct: 228 ENLETLDLRENQIEFLPSEIGNLRNLKRLDLFKNHLTSLPPEIGKLKNLKDLDLMHNDLT 287

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLPK+  +L  L+  +L  N L   P  I+ +  +  LYL +N L+ +P E      L
Sbjct: 288 --SLPKEFGDLTGLEKLSLQNNNLTSIPASIIRLKKIPELYLQSNQLSSLPPEFGNHLSL 345

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N  T IP     L  LE L  +DNQ+  LPA I  LK L+SL L  N ++ LP
Sbjct: 346 GGLFLDQNQFTSIPPEIWKLQNLERLSFADNQITELPAEIGRLKKLRSLDLIGNPIKQLP 405

Query: 235 TEIITLKCLS 244
            EI  L  LS
Sbjct: 406 PEISQLTSLS 415



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 114/227 (50%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHL-PQAITNFPLSTLIARNNLLT 114
           +N+  L +  N++ + PD     + L+ LDLS N++  L P+      L  L   +N L 
Sbjct: 90  KNLTWLNVSDNSIRYLPDEIGNLSQLKELDLSENKLMRLDPEFGQLSSLERLNLSSNWL- 148

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            ++LP +   L+NL+  NL  N +   P     +  L  L +  N +  V   I  L KL
Sbjct: 149 -KTLPPEFGMLENLRDLNLDSNSIASLPPVFEKLHQLNSLSMNGNEMVTVTDSIGGLKKL 207

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L    N + ++P   G+L  LE L L +NQ+E LP+ I NL+ LK L L  N L +LP
Sbjct: 208 RYLYALKNRIKELPPQIGNLENLETLDLRENQIEFLPSEIGNLRNLKRLDLFKNHLTSLP 267

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            EI  LK     LK L L +N L +LP E   L  L +LSL++N L 
Sbjct: 268 PEIGKLK----NLKDLDLMHNDLTSLPKEFGDLTGLEKLSLQNNNLT 310



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 65/183 (35%), Positives = 92/183 (50%), Gaps = 5/183 (2%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           QIE LP+   N +  N+  L L+ N+L+  P    K  NL+ LDL +N +T LP+   + 
Sbjct: 239 QIEFLPSEIGNLR--NLKRLDLFKNHLTSLPPEIGKLKNLKDLDLMHNDLTSLPKEFGDL 296

Query: 102 -PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
             L  L  +NN LT  S+P  +  LK +    L  NQL   P +  +  +L  L+L  N 
Sbjct: 297 TGLEKLSLQNNNLT--SIPASIIRLKKIPELYLQSNQLSSLPPEFGNHLSLGGLFLDQNQ 354

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
              +P EI KL  L  LS   N +T++P   G L +L +L L  N ++ LP  IS L  L
Sbjct: 355 FTSIPPEIWKLQNLERLSFADNQITELPAEIGRLKKLRSLDLIGNPIKQLPPEISQLTSL 414

Query: 221 KSL 223
            S 
Sbjct: 415 SSF 417


>gi|432885659|ref|XP_004074704.1| PREDICTED: protein LAP2-like [Oryzias latipes]
          Length = 1250

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 113/221 (51%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P +  K T L  LDL +N  T +P+ + +   +  L    N LT   LP
Sbjct: 165 LELRENQLQNLPKSMQKLTQLERLDLGSNEFTEVPEVLEHLSGIKELWMDGNKLTV--LP 222

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             +  LKNL+  ++S N LE    QI     L+ L L NN+L  +P  I  L KL  L +
Sbjct: 223 AMVGKLKNLEYLDMSKNNLEMVDEQISGCENLQDLLLSNNALTQLPASIGSLKKLTALKV 282

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  ++ L  S N++E+LP+SI     +++    +N L  LP E+  
Sbjct: 283 DENQLMFLPDSVGGLTAIDELDCSFNEIEALPSSIGQWVAIRTFAADHNFLTELPPEMGN 342

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K L+     L LH+NKL +LP E+  ++ L  ++L +N L
Sbjct: 343 WKNLT----VLFLHSNKLESLPEEMGDMQKLKVINLSNNKL 379



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 136/275 (49%), Gaps = 24/275 (8%)

Query: 24  IKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNNL 68
           + +LD+S+ SL++         +TL      A QIE LP   +N   + ++ L +  N+L
Sbjct: 23  VTSLDYSHCSLETVPKEIFSFEKTLQELYLDANQIEELPKQLFNC--QLLNRLSVPDNDL 80

Query: 69  SFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI-ARNNLLTAESLPKDMSNLKN 127
           +  P   +   NLR LD+S N I   P +I N    T++ A  N +    LP+  + L N
Sbjct: 81  AVLPAAIANLINLRELDVSKNGIQEFPDSIKNCKGLTIVEASVNRMP--KLPEGFTLLLN 138

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           L    L+   LE  P     +  L+ L L  N L ++P+ + KL +L  L LG N  T++
Sbjct: 139 LTQLYLNDGYLEFLPASFGRLAKLQILELRENQLQNLPKSMQKLTQLERLDLGSNEFTEV 198

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
           P+    L  ++ L +  N+L  LPA +  LK L+ L +  N L  +  +I    C  E L
Sbjct: 199 PEVLEHLSGIKELWMDGNKLTVLPAMVGKLKNLEYLDMSKNNLEMVDEQISG--C--ENL 254

Query: 248 KSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           + LLL NN L  LP  I +LK L+ L + +N L+ 
Sbjct: 255 QDLLLSNNALTQLPASIGSLKKLTALKVDENQLMF 289



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 106/229 (46%), Gaps = 15/229 (6%)

Query: 41  TQIELL--PNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRIT 92
           TQ+E L   +N++ + PE       I  L +  N L+  P    K  NL  LD+S N + 
Sbjct: 183 TQLERLDLGSNEFTEVPEVLEHLSGIKELWMDGNKLTVLPAMVGKLKNLEYLDMSKNNLE 242

Query: 93  HLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
            + + I+    L  L+  NN LT   LP  + +LK L    +  NQL   P  +  +  +
Sbjct: 243 MVDEQISGCENLQDLLLSNNALT--QLPASIGSLKKLTALKVDENQLMFLPDSVGGLTAI 300

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
             L    N +  +P  I +   +   +   N LT++P   G+   L  L L  N+LESLP
Sbjct: 301 DELDCSFNEIEALPSSIGQWVAIRTFAADHNFLTELPPEMGNWKNLTVLFLHSNKLESLP 360

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
             + +++ LK + L NNKL+ LP     L     ++ ++ L  N+ + L
Sbjct: 361 EEMGDMQKLKVINLSNNKLKNLPYSFTKLS----EMTAMWLSENQSKPL 405


>gi|449678883|ref|XP_002165472.2| PREDICTED: protein scribble homolog, partial [Hydra magnipapillata]
          Length = 432

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 117/225 (52%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L  N + F P + S  + L  LDL  N +  LP  I     L  L   NN LT 
Sbjct: 158 NLVVLELRENCIKFLPLSFSFLSKLERLDLGGNELEELPDTIGQLTCLIELWLDNNFLT- 216

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LP ++  LK L+  ++S N++E+ P +I  + +L  L+  +N+L+ +P+ I  L KL 
Sbjct: 217 -TLPSEIGELKALQCLDVSENRIEELPEEISTLTSLTDLHCTSNALHELPQGIGCLIKLQ 275

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N + +I D  G    L  ++LS+N +E LPA+I  L  L  L +  N+L T P 
Sbjct: 276 ILKVDQNEIDEITDCIGGCTNLLEVVLSENVIEFLPAAIGKLSNLTLLNIDRNRLFTFPP 335

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI        KL  L   +N++  +P EI + K L+ LSL  N L
Sbjct: 336 EIGN----CTKLSVLSARDNQIVKIPKEIGSCKSLTVLSLSGNKL 376



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 123/268 (45%), Gaps = 26/268 (9%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTL--IARNNLLTAESL 118
           L+L  N +    ++ S    L  LD S N +  +P +I N    T   I+ N L     L
Sbjct: 70  LILADNEIQDLTNDISSLIALEELDFSKNDVRVVPDSIQNCKKLTFLDISSNTL---GEL 126

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P  ++ L  LK +  +   L + P +I  +  L  L L  N +  +P   + L KL  L 
Sbjct: 127 PDSLTKLNQLKTWIANDIALTEIPPEIGSLSNLVVLELRENCIKFLPLSFSFLSKLERLD 186

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           LGGN L ++PDT G L  L  L L +N L +LP+ I  LK L+ L +  N++  LP EI 
Sbjct: 187 LGGNELEELPDTIGQLTCLIELWLDNNFLTTLPSEIGELKALQCLDVSENRIEELPEEIS 246

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLEL 298
           TL  L++    L   +N L  LP  I  L  L  L +  N   I  ++D      +LLE+
Sbjct: 247 TLTSLTD----LHCTSNALHELPQGIGCLIKLQILKVDQNE--IDEITDCIGGCTNLLEV 300

Query: 299 ASRTLKVHEIDYSQEHLPQNLVQYLESA 326
                           L +N++++L +A
Sbjct: 301 V---------------LSENVIEFLPAA 313



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 65/201 (32%), Positives = 95/201 (47%), Gaps = 8/201 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           NL  LD S+  +T + + I      L  L    N LT   LPK +  +  L+   L+ N+
Sbjct: 19  NLDYLDKSHCSLTTVTEDILRHAGTLEELSLEGNQLT--DLPKGIFRMTKLRRLILADNE 76

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           ++     I  +  L+ L    N +  VP  I    KL  L +  N+L ++PD+   L QL
Sbjct: 77  IQDLTNDISSLIALEELDFSKNDVRVVPDSIQNCKKLTFLDISSNTLGELPDSLTKLNQL 136

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
           +  I +D  L  +P  I +L  L  L L  N ++ LP   ++   LS KL+ L L  N+L
Sbjct: 137 KTWIANDIALTEIPPEIGSLSNLVVLELRENCIKFLP---LSFSFLS-KLERLDLGGNEL 192

Query: 258 RTLPTEIITLKCLSELSLRDN 278
             LP  I  L CL EL L +N
Sbjct: 193 EELPDTIGQLTCLIELWLDNN 213


>gi|421100188|ref|ZP_15560824.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
 gi|410796778|gb|EKR98901.1| leucine rich repeat protein [Leptospira borgpetersenii str.
           200901122]
          Length = 674

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 125/228 (54%), Gaps = 10/228 (4%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +N++ + L  N ++   +    F  ++ L L  NR+  L + I NFP     L+ RN L 
Sbjct: 433 KNLEKIDLARNVITGISNLTRAFVQVKELGLYENRLASL-EGIRNFPNLEQLLVWRNEL- 490

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
             E++P ++ +LK L   +L  N++   P   +++ ++K L LG N ++ +P+ + +   
Sbjct: 491 --ETIPVEIVDLKKLIRISLPENRISNLPDLNVELESVKELSLGENRISKLPKSLVQFPN 548

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L GN L ++ D FG+  +LE L LS+N L SLP SI+ LK L+ L L NNK   +
Sbjct: 549 LESLDLDGNQLEELSDLFGNFKKLEGLYLSNNGLASLPVSIAQLKSLEDLSLENNKFAEI 608

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P     +    +KLK L +++N++  LP  +  +K L EL + +NP+ 
Sbjct: 609 P----EILKELKKLKELWMNDNRISELPEFLSEMKALRELKIGNNPIA 652



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 58/185 (31%), Positives = 92/185 (49%), Gaps = 9/185 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTL----IARNNL 112
           N++ LL++ N L   P        L  + L  NRI++LP    N  L ++    +  N +
Sbjct: 479 NLEQLLVWRNELETIPVEIVDLKKLIRISLPENRISNLPD--LNVELESVKELSLGENRI 536

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
                LPK +    NL+  +L GNQLE+      +   L+ LYL NN L  +P  I +L 
Sbjct: 537 ---SKLPKSLVQFPNLESLDLDGNQLEELSDLFGNFKKLEGLYLSNNGLASLPVSIAQLK 593

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  LSL  N   +IP+   +L +L+ L ++DN++  LP  +S +K L+ L + NN +  
Sbjct: 594 SLEDLSLENNKFAEIPEILKELKKLKELWMNDNRISELPEFLSEMKALRELKIGNNPIAQ 653

Query: 233 LPTEI 237
              E+
Sbjct: 654 NQEEV 658



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 129/296 (43%), Gaps = 66/296 (22%)

Query: 51  YNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSN-NRITHLPQAITNFPLSTLIAR 109
           Y+K  E+I  L     +LS    +   F NL+   LSN  +IT L               
Sbjct: 293 YSKGSESISVLEAEEIDLS----DIGLFENLKEFSLSNCKKITSL--------------- 333

Query: 110 NNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREIN 169
                     K +  LKN++  ++   QL +FP  +L I +L  LY  +N     P   N
Sbjct: 334 ----------KSLCELKNIRTISIEEVQLTEFPDFLLGISSLGSLYFTDNG----PFTEN 379

Query: 170 K-----LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLL 224
           K        +  L L  N+L +IP+    L +L+ LI+ DNQL   P  +++LK L+ + 
Sbjct: 380 KTNLPNFSNVEKLCLNNNALGEIPEFVYRLSKLKELIVIDNQLIEFPERLADLKNLEKID 439

Query: 225 LHNN---KLRTLPTEIITLKCLS---------------EKLKSLLLHNNKLRTLPTEIIT 266
           L  N    +  L    + +K L                  L+ LL+  N+L T+P EI+ 
Sbjct: 440 LARNVITGISNLTRAFVQVKELGLYENRLASLEGIRNFPNLEQLLVWRNELETIPVEIVD 499

Query: 267 LKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQY 322
           LK L  +SL +N   I  + D+  +  S+ EL+    ++ +       LP++LVQ+
Sbjct: 500 LKKLIRISLPENR--ISNLPDLNVELESVKELSLGENRISK-------LPKSLVQF 546



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 45/155 (29%), Positives = 75/155 (48%), Gaps = 3/155 (1%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L  N +S  PD   +  +++ L L  NRI+ LP+++  FP L +L    N L  E L   
Sbjct: 508 LPENRISNLPDLNVELESVKELSLGENRISKLPKSLVQFPNLESLDLDGNQL--EELSDL 565

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
             N K L+   LS N L   P+ I  + +L+ L L NN    +P  + +L KL  L +  
Sbjct: 566 FGNFKKLEGLYLSNNGLASLPVSIAQLKSLEDLSLENNKFAEIPEILKELKKLKELWMND 625

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
           N ++++P+   ++  L  L + +N +      + N
Sbjct: 626 NRISELPEFLSEMKALRELKIGNNPIAQNQEEVKN 660


>gi|91091582|ref|XP_968188.1| PREDICTED: similar to shoc2 [Tribolium castaneum]
 gi|270001034|gb|EEZ97481.1| hypothetical protein TcasGA2_TC011315 [Tribolium castaneum]
          Length = 565

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 86/238 (36%), Positives = 125/238 (52%), Gaps = 11/238 (4%)

Query: 63  LYHNNLSFFPDNA-SKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLP 119
           L  NN + +P    S+FTN+ S++L +N+I  +P  I +    L+ L  + N LT  SLP
Sbjct: 322 LSRNNFAAYPSGGPSQFTNVDSINLEHNQIDKIPYGIFSRAKHLTKLNMKENQLT--SLP 379

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            D+    N+   NL  NQL + P  I  +  L+ L L NN L  +P  +  L KL VL L
Sbjct: 380 LDVGTWTNMVELNLGTNQLGKLPDDIQALQALEVLVLSNNLLRRIPPSVGNLRKLRVLDL 439

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +P+  G L  L+ LI+  NQL SLP +I +L  L  L +  N L  LP EI T
Sbjct: 440 EENRLEQLPNEIGYLRDLQRLIVQSNQLTSLPRAIGHLANLVFLSVGENNLAYLPEEIGT 499

Query: 240 LKCLSEKLKSLLLHNN-KLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
           L    E L+SL +++N  L  LP E+     L  +S+ + PL  +  +++    PSL+
Sbjct: 500 L----ENLESLYVNDNPSLHNLPFELALCSNLQIMSIENCPLS-QIPAEIVAGGPSLV 552



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/212 (31%), Positives = 115/212 (54%), Gaps = 6/212 (2%)

Query: 31  YSSLDSETLA-TQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNN 89
           ++++DS  L   QI+ +P   +++  +++  L +  N L+  P +   +TN+  L+L  N
Sbjct: 338 FTNVDSINLEHNQIDKIPYGIFSRA-KHLTKLNMKENQLTSLPLDVGTWTNMVELNLGTN 396

Query: 90  RITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDI 148
           ++  LP  I     L  L+  NNLL    +P  + NL+ L+V +L  N+LEQ P +I  +
Sbjct: 397 QLGKLPDDIQALQALEVLVLSNNLL--RRIPPSVGNLRKLRVLDLEENRLEQLPNEIGYL 454

Query: 149 PTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDN-QL 207
             L+ L + +N L  +PR I  L  L  LS+G N+L  +P+  G L  LE+L ++DN  L
Sbjct: 455 RDLQRLIVQSNQLTSLPRAIGHLANLVFLSVGENNLAYLPEEIGTLENLESLYVNDNPSL 514

Query: 208 ESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
            +LP  ++    L+ + + N  L  +P EI+ 
Sbjct: 515 HNLPFELALCSNLQIMSIENCPLSQIPAEIVA 546



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 84/278 (30%), Positives = 132/278 (47%), Gaps = 22/278 (7%)

Query: 20  KTVSIKTLDFSYSSLD--SETLATQIEL----LPNNDYNKKPENIDTLL------LYHNN 67
           K V++ T D S++ L+   E +   I L    L +N+    P+ I  L       L +N 
Sbjct: 220 KLVNLVTFDVSHNHLEHLPEEIGQCINLSTLDLQHNELLDIPDTIGELQQLTRLGLRYNR 279

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTL---IARNNLLTAESLPKDMSN 124
           LSF P + S   ++   ++  N I+ LP+ + +         ++RNN     S     S 
Sbjct: 280 LSFIPSSLSNCRHMDEFNVEGNAISQLPEGLLSSLSELTSITLSRNNFAAYPS--GGPSQ 337

Query: 125 LKNLKVFNLSGNQLEQFPIQILD-IPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
             N+   NL  NQ+++ P  I      L  L +  N L  +P ++     +  L+LG N 
Sbjct: 338 FTNVDSINLEHNQIDKIPYGIFSRAKHLTKLNMKENQLTSLPLDVGTWTNMVELNLGTNQ 397

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           L  +PD    L  LE L+LS+N L  +P S+ NL+ L+ L L  N+L  LP EI  L+  
Sbjct: 398 LGKLPDDIQALQALEVLVLSNNLLRRIPPSVGNLRKLRVLDLEENRLEQLPNEIGYLR-- 455

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
              L+ L++ +N+L +LP  I  L  L  LS+ +N L 
Sbjct: 456 --DLQRLIVQSNQLTSLPRAIGHLANLVFLSVGENNLA 491



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/179 (31%), Positives = 94/179 (52%), Gaps = 3/179 (1%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ TL L  N+L+  PD+     +L+ LDL +N++  +P  +     L+TL  R N +  
Sbjct: 131 NLQTLALSENSLTSLPDSLMSLKSLKVLDLRHNKLNDIPDVVYKLTSLTTLFLRFNRI-- 188

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +  ++  L +L + +L  N++++ P  I  +  L    + +N L H+P EI +   L 
Sbjct: 189 RYVDDEIRFLTSLTMLSLRENKIKELPAGIGKLVNLVTFDVSHNHLEHLPEEIGQCINLS 248

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            L L  N L DIPDT G+L QL  L L  N+L  +P+S+SN + +    +  N +  LP
Sbjct: 249 TLDLQHNELLDIPDTIGELQQLTRLGLRYNRLSFIPSSLSNCRHMDEFNVEGNAISQLP 307



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/228 (30%), Positives = 110/228 (48%), Gaps = 7/228 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           + E +  L L  +N++  P       +L  L L  N++ +LP  I     L TL    N 
Sbjct: 82  RDEGLKRLDLSKSNITHLPPTVRDLIHLSELYLYGNKLVYLPLEIGCLTNLQTLALSENS 141

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  SLP  + +LK+LKV +L  N+L   P  +  + +L  L+L  N + +V  EI  L 
Sbjct: 142 LT--SLPDSLMSLKSLKVLDLRHNKLNDIPDVVYKLTSLTTLFLRFNRIRYVDDEIRFLT 199

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L +LSL  N + ++P   G L  L    +S N LE LP  I     L +L L +N+L  
Sbjct: 200 SLTMLSLRENKIKELPAGIGKLVNLVTFDVSHNHLEHLPEEIGQCINLSTLDLQHNELLD 259

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +P  I  L    ++L  L L  N+L  +P+ +   + + E ++  N +
Sbjct: 260 IPDTIGEL----QQLTRLGLRYNRLSFIPSSLSNCRHMDEFNVEGNAI 303


>gi|45657379|ref|YP_001465.1| hypothetical protein [Leptospira interrogans serovar Copenhageni
           str. Fiocruz L1-130]
 gi|45600618|gb|AAS70102.1| cytoplasmic membrane protein [Leptospira interrogans serovar
           Copenhageni str. Fiocruz L1-130]
          Length = 266

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 99/164 (60%), Gaps = 4/164 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK +  LKNL++ +L  NQ +  P +I  +  L+ L L  N    VP++I +L  L V
Sbjct: 88  TLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQV 147

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+L  N LT +P   G    L+ L L  N+L++LP  I  LK L++L L+ N+L TLP E
Sbjct: 148 LNLSSNQLTTLPKEIGKPENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPRE 207

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L+ L+E    L L +N++ TLP EII L+ L +L+L +NP+
Sbjct: 208 IGRLQSLTE----LHLQHNQIATLPDEIIQLQNLRKLTLYENPI 247



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 28/199 (14%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           ++  L+L    L+  P    +  NL+ LDL  N+                         +
Sbjct: 75  DVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQF------------------------K 110

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++PK++  LKNL++ +L  NQ +  P +I  +  L+ L L +N L  +P+EI K   L V
Sbjct: 111 TVPKEIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKPENLQV 170

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+LG N L  +P     L  L+ L L+ NQL +LP  I  L+ L  L L +N++ TLP E
Sbjct: 171 LNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPREIGRLQSLTELHLQHNQIATLPDE 230

Query: 237 IITLKCLSEKLKSLLLHNN 255
           II L    + L+ L L+ N
Sbjct: 231 IIQL----QNLRKLTLYEN 245



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 90/168 (53%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L + + N  ++++  LS  +L   P +I  +  L+ L L  N    VP+EI +L  
Sbjct: 62  TYRDLTEALQNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKN 121

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N    +P   G L  L+ L LS NQL +LP  I   + L+ L L +N+L+TL
Sbjct: 122 LQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKPENLQVLNLGSNRLKTL 181

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P  I  LK     L++L L+ N+L TLP EI  L+ L+EL L+ N + 
Sbjct: 182 PKGIEQLK----NLQTLYLNYNQLTTLPREIGRLQSLTELHLQHNQIA 225



 Score = 77.8 bits (190), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 80/173 (46%), Gaps = 24/173 (13%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           +N+  L L +N     P    +  NL+ LDL  N+                         
Sbjct: 97  KNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQF------------------------ 132

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           +++PK +  LKNL+V NLS NQL   P +I     L+ L LG+N L  +P+ I +L  L 
Sbjct: 133 KTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKPENLQVLNLGSNRLKTLPKGIEQLKNLQ 192

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
            L L  N LT +P   G L  L  L L  NQ+ +LP  I  L+ L+ L L+ N
Sbjct: 193 TLYLNYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYEN 245



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 35/183 (19%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           +++ LD  Y+    +T+  +IE L         +N+  L L +N     P    +  NL+
Sbjct: 98  NLQMLDLCYNQF--KTVPKEIEQL---------KNLQMLDLCYNQFKTVPKKIGQLKNLQ 146

Query: 83  SLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
            L+LS+N++T                        +LPK++   +NL+V NL  N+L+  P
Sbjct: 147 VLNLSSNQLT------------------------TLPKEIGKPENLQVLNLGSNRLKTLP 182

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
             I  +  L+ LYL  N L  +PREI +L  L  L L  N +  +PD    L  L  L L
Sbjct: 183 KGIEQLKNLQTLYLNYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTL 242

Query: 203 SDN 205
            +N
Sbjct: 243 YEN 245



 Score = 41.2 bits (95), Expect = 0.80,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 26/121 (21%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLL 113
           KPEN+  L L  N L   P    +  NL++L L+ N++T                     
Sbjct: 164 KPENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLT--------------------- 202

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
              +LP+++  L++L   +L  NQ+   P +I+ +  L+ L L  N +   P+E++K+ K
Sbjct: 203 ---TLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYENPIP--PQELDKIRK 257

Query: 174 L 174
           L
Sbjct: 258 L 258


>gi|456984210|gb|EMG20325.1| leucine rich repeat protein [Leptospira interrogans serovar
           Copenhageni str. LT2050]
          Length = 258

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 99/164 (60%), Gaps = 4/164 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK +  LKNL++ +L  NQ +  P +I  +  L+ L L  N    VP++I +L  L V
Sbjct: 80  TLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQV 139

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+L  N LT +P   G    L+ L L  N+L++LP  I  LK L++L L+ N+L TLP E
Sbjct: 140 LNLSSNQLTTLPKEIGKPENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPRE 199

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L+ L+E    L L +N++ TLP EII L+ L +L+L +NP+
Sbjct: 200 IGRLQSLTE----LHLQHNQIATLPDEIIQLQNLRKLTLYENPI 239



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 28/199 (14%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           ++  L+L    L+  P    +  NL+ LDL  N+                         +
Sbjct: 67  DVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQF------------------------K 102

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++PK++  LKNL++ +L  NQ +  P +I  +  L+ L L +N L  +P+EI K   L V
Sbjct: 103 TVPKEIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKPENLQV 162

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+LG N L  +P     L  L+ L L+ NQL +LP  I  L+ L  L L +N++ TLP E
Sbjct: 163 LNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPREIGRLQSLTELHLQHNQIATLPDE 222

Query: 237 IITLKCLSEKLKSLLLHNN 255
           II L    + L+ L L+ N
Sbjct: 223 IIQL----QNLRKLTLYEN 237



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 61/168 (36%), Positives = 90/168 (53%), Gaps = 4/168 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L + + N  ++++  LS  +L   P +I  +  L+ L L  N    VP+EI +L  
Sbjct: 54  TYRDLTEALQNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKN 113

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N    +P   G L  L+ L LS NQL +LP  I   + L+ L L +N+L+TL
Sbjct: 114 LQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKPENLQVLNLGSNRLKTL 173

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P  I  LK     L++L L+ N+L TLP EI  L+ L+EL L+ N + 
Sbjct: 174 PKGIEQLK----NLQTLYLNYNQLTTLPREIGRLQSLTELHLQHNQIA 217



 Score = 77.8 bits (190), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 80/173 (46%), Gaps = 24/173 (13%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           +N+  L L +N     P    +  NL+ LDL  N+                         
Sbjct: 89  KNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQF------------------------ 124

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           +++PK +  LKNL+V NLS NQL   P +I     L+ L LG+N L  +P+ I +L  L 
Sbjct: 125 KTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKPENLQVLNLGSNRLKTLPKGIEQLKNLQ 184

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
            L L  N LT +P   G L  L  L L  NQ+ +LP  I  L+ L+ L L+ N
Sbjct: 185 TLYLNYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYEN 237



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 35/183 (19%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           +++ LD  Y+    +T+  +IE L         +N+  L L +N     P    +  NL+
Sbjct: 90  NLQMLDLCYNQF--KTVPKEIEQL---------KNLQMLDLCYNQFKTVPKKIGQLKNLQ 138

Query: 83  SLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
            L+LS+N++T                        +LPK++   +NL+V NL  N+L+  P
Sbjct: 139 VLNLSSNQLT------------------------TLPKEIGKPENLQVLNLGSNRLKTLP 174

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
             I  +  L+ LYL  N L  +PREI +L  L  L L  N +  +PD    L  L  L L
Sbjct: 175 KGIEQLKNLQTLYLNYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTL 234

Query: 203 SDN 205
            +N
Sbjct: 235 YEN 237



 Score = 41.2 bits (95), Expect = 0.79,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 26/121 (21%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLL 113
           KPEN+  L L  N L   P    +  NL++L L+ N++T                     
Sbjct: 156 KPENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLT--------------------- 194

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
              +LP+++  L++L   +L  NQ+   P +I+ +  L+ L L  N +   P+E++K+ K
Sbjct: 195 ---TLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYENPIP--PQELDKIRK 249

Query: 174 L 174
           L
Sbjct: 250 L 250


>gi|428173352|gb|EKX42255.1| hypothetical protein GUITHDRAFT_74163 [Guillardia theta CCMP2712]
          Length = 643

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 111/345 (32%), Positives = 154/345 (44%), Gaps = 71/345 (20%)

Query: 24  IKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRS 83
           +K +DFS++SL    +   I  L         E ++ L L +N L   P      T+L+S
Sbjct: 250 LKRIDFSHNSL--RGIPPDIGTL---------EEVEYLDLSYNQLQELPREVGFMTSLQS 298

Query: 84  LDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           LD SNN+I  LP  +      L+ L A NN +T  +LP ++ NL+NL+ F+LS N L + 
Sbjct: 299 LDFSNNQIVFLPVELEALETSLTLLSADNNAITDPTLPVELGNLRNLERFDLSSNLLSRL 358

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFG--------- 192
           P  I  + +L Y  + +N L  +P E+  L  L  L L  N L  +P   G         
Sbjct: 359 PSSIKRLESLVYFNVNSNRLTTIPPEVKGLKSLIELHLKDNLLISMPPEIGSLSSLTTLS 418

Query: 193 ---------------DLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
                           L+ LE L   DN+L S+  SIS L  L  L L NN LR LP E+
Sbjct: 419 LDGNQFMSIPTTMIFQLFTLEKLEAGDNRLRSVSPSISQLSCLTLLSLKNNNLRVLPREL 478

Query: 238 ---ITLKCLS----------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
                LK LS                 +L+ L L  N L  LP  I  L  L  L  RDN
Sbjct: 479 GRCTGLKTLSLNANDIIAIPDQLCGLARLRRLTLDKNGLCFLPDTIGCLVNLRSLRFRDN 538

Query: 279 PLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQE---HLPQNLV 320
            L++R        PPS   L S    + E+D S+    ++PQ+L+
Sbjct: 539 -LIMRL-------PPSFSSLTS----LRELDMSKNKFTNIPQSLL 571



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/231 (34%), Positives = 114/231 (49%), Gaps = 15/231 (6%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHL--PQAITNFPL--STLIARNNL 112
           N+  + L  N L   P       +LR++D+S+N +  L  P+ I+   L     +A N +
Sbjct: 61  NLQVISLEENKLKEIPSQIENCGSLRTIDVSHNNLRRLPIPRKISRLKLLKELRVAHNQI 120

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
              +S+P  MS L NLK+ ++S N L  F   + DIP L  L    N+   +P EI K+ 
Sbjct: 121 ---DSIPYTMSLLNNLKILDVSSNHLTSFDTVLTDIPQLVVLNFAKNAATELPVEIAKMT 177

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQ---LEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
            L  LS+ GN +  IPD    L+Q   LE L L  NQ+  LP SIS    L+ L    N 
Sbjct: 178 NLRELSVQGNQIRSIPD-IAALFQLTNLEVLYLRYNQVTFLPGSISKFTNLRELDCAYNS 236

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L   P +I  LK    +LK +   +N LR +P +I TL+ +  L L  N L
Sbjct: 237 LVDTPPDIRELK----RLKRIDFSHNSLRGIPPDIGTLEEVEYLDLSYNQL 283



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 81/285 (28%), Positives = 128/285 (44%), Gaps = 44/285 (15%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           S++T+D S+++L    +  +I  L         + +  L + HN +   P   S   NL+
Sbjct: 84  SLRTIDVSHNNLRRLPIPRKISRL---------KLLKELRVAHNQIDSIPYTMSLLNNLK 134

Query: 83  SLDLSNNRITHLPQAITNFPLSTLI--ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
            LD+S+N +T     +T+ P   ++  A+N    A  LP +++ + NL+  ++ GNQ+  
Sbjct: 135 ILDVSSNHLTSFDTVLTDIPQLVVLNFAKN---AATELPVEIAKMTNLRELSVQGNQIRS 191

Query: 141 FP--IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD------------ 186
            P    +  +  L+ LYL  N +  +P  I+K   L  L    NSL D            
Sbjct: 192 IPDIAALFQLTNLEVLYLRYNQVTFLPGSISKFTNLRELDCAYNSLVDTPPDIRELKRLK 251

Query: 187 -----------IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
                      IP   G L ++E L LS NQL+ LP  +  +  L+SL   NN++  LP 
Sbjct: 252 RIDFSHNSLRGIPPDIGTLEEVEYLDLSYNQLQELPREVGFMTSLQSLDFSNNQIVFLPV 311

Query: 236 EIITLKCLSEKLKSLLLHNNKLR--TLPTEIITLKCLSELSLRDN 278
           E   L+ L   L  L   NN +   TLP E+  L+ L    L  N
Sbjct: 312 E---LEALETSLTLLSADNNAITDPTLPVELGNLRNLERFDLSSN 353



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 88/321 (27%), Positives = 140/321 (43%), Gaps = 58/321 (18%)

Query: 23  SIKTLDFS-----YSSLDSETLATQIELL-PNNDYNKKP---------ENIDTLLLYHNN 67
           S+++LDFS     +  ++ E L T + LL  +N+    P          N++   L  N 
Sbjct: 295 SLQSLDFSNNQIVFLPVELEALETSLTLLSADNNAITDPTLPVELGNLRNLERFDLSSNL 354

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           LS  P +  +  +L   ++++NR+T +P  +     L  L  ++NLL   S+P ++ +L 
Sbjct: 355 LSRLPSSIKRLESLVYFNVNSNRLTTIPPEVKGLKSLIELHLKDNLLI--SMPPEIGSLS 412

Query: 127 NLKVFNLSGNQLEQFPI-QILDIPTLKYLYLGNNSLNHV--------------------- 164
           +L   +L GNQ    P   I  + TL+ L  G+N L  V                     
Sbjct: 413 SLTTLSLDGNQFMSIPTTMIFQLFTLEKLEAGDNRLRSVSPSISQLSCLTLLSLKNNNLR 472

Query: 165 --PREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKS 222
             PRE+ +   L  LSL  N +  IPD    L +L  L L  N L  LP +I  L  L+S
Sbjct: 473 VLPRELGRCTGLKTLSLNANDIIAIPDQLCGLARLRRLTLDKNGLCFLPDTIGCLVNLRS 532

Query: 223 LLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL-- 280
           L   +N +  LP    +L  L E    L +  NK   +P  ++ L  L+ L    NP+  
Sbjct: 533 LRFRDNLIMRLPPSFSSLTSLRE----LDMSKNKFTNIPQSLLDLTGLTRLRCGHNPIPY 588

Query: 281 ----------VIRFVSDMTYK 291
                     V +F+++ TY+
Sbjct: 589 SLSTSWIEDDVRKFLTNYTYE 609



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 83/309 (26%), Positives = 141/309 (45%), Gaps = 38/309 (12%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLK 126
           L+ FP        L ++  + N I  LP  +     L +L    N L A  LP  + NL 
Sbjct: 3   LTVFPGLICDIFILSNISATKNEIKELPAEVGLLTALQSLKLGKNRLIA--LPPSIGNLT 60

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNH--VPREINKLCKLHVLSLGGNSL 184
           NL+V +L  N+L++ P QI +  +L+ + + +N+L    +PR+I++L  L  L +  N +
Sbjct: 61  NLQVISLEENKLKEIPSQIENCGSLRTIDVSHNNLRRLPIPRKISRLKLLKELRVAHNQI 120

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
             IP T   L  L+ L +S N L S    ++++  L  L    N    LP EI  +  L 
Sbjct: 121 DSIPYTMSLLNNLKILDVSSNHLTSFDTVLTDIPQLVVLNFAKNAATELPVEIAKMTNLR 180

Query: 245 EKLKSLLLHNNKLRTLP--TEIITLKCLSELSLRDNPL------VIRFVS----DMTY-- 290
           E    L +  N++R++P    +  L  L  L LR N +      + +F +    D  Y  
Sbjct: 181 E----LSVQGNQIRSIPDIAALFQLTNLEVLYLRYNQVTFLPGSISKFTNLRELDCAYNS 236

Query: 291 ---KPPSLLELASRTLKVHEIDYSQEHL---PQNL-----VQYLESAHHCVNPKCKGVFF 339
               PP + EL     ++  ID+S   L   P ++     V+YL+ +++ +    + V F
Sbjct: 237 LVDTPPDIRELK----RLKRIDFSHNSLRGIPPDIGTLEEVEYLDLSYNQLQELPREVGF 292

Query: 340 DNRIEHIKF 348
              ++ + F
Sbjct: 293 MTSLQSLDF 301



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/127 (32%), Positives = 68/127 (53%), Gaps = 6/127 (4%)

Query: 137 QLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQ 196
           +L  FP  I DI  L  +    N +  +P E+  L  L  L LG N L  +P + G+L  
Sbjct: 2   KLTVFPGLICDIFILSNISATKNEIKELPAEVGLLTALQSLKLGKNRLIALPPSIGNLTN 61

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT--EIITLKCLSEKLKSLLLHN 254
           L+ + L +N+L+ +P+ I N   L+++ + +N LR LP   +I  LK L E    L + +
Sbjct: 62  LQVISLEENKLKEIPSQIENCGSLRTIDVSHNNLRRLPIPRKISRLKLLKE----LRVAH 117

Query: 255 NKLRTLP 261
           N++ ++P
Sbjct: 118 NQIDSIP 124


>gi|347963067|ref|XP_311104.5| AGAP000054-PA [Anopheles gambiae str. PEST]
 gi|333467375|gb|EAA06225.6| AGAP000054-PA [Anopheles gambiae str. PEST]
          Length = 1593

 Score =  104 bits (259), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 121/224 (54%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLT 114
           +++ LLL  N++   P    +   LR L LS+N I  +P  I NF   +   ++RN +  
Sbjct: 38  SLEELLLDANHIRDLPKGFFRLYRLRKLGLSDNDIIKIPSDIQNFVNLVELDVSRNEI-- 95

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+D+ +L++L++ + S N + + P     +  L  L L + SL  +P++   L KL
Sbjct: 96  -GDIPEDIKHLRSLQIADFSSNPISRLPAGFTQLRNLTVLGLNDMSLISLPQDFGCLSKL 154

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L ++P++   L +LE L L DN+++ LP+ +  L  L+ L L +N+L  LP
Sbjct: 155 VSLELRENLLKNLPESISQLTKLERLDLGDNEIDELPSHVGYLPSLQELWLDHNQLLRLP 214

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK    KL  L +  N+L  LP EI  L+CL++L L  N
Sbjct: 215 PEIGLLK----KLVCLDVSENRLEELPEEIGGLECLTDLHLSQN 254



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 126/266 (47%), Gaps = 36/266 (13%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +ND  K P +I   +      +  N +   P++     +L+  D S+N I+ LP   T
Sbjct: 67  LSDNDIIKIPSDIQNFVNLVELDVSRNEIGDIPEDIKHLRSLQIADFSSNPISRLPAGFT 126

Query: 100 NFP---------------------LSTLIA---RNNLLTAESLPKDMSNLKNLKVFNLSG 135
                                   LS L++   R NLL  ++LP+ +S L  L+  +L  
Sbjct: 127 QLRNLTVLGLNDMSLISLPQDFGCLSKLVSLELRENLL--KNLPESISQLTKLERLDLGD 184

Query: 136 NQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLY 195
           N++++ P  +  +P+L+ L+L +N L  +P EI  L KL  L +  N L ++P+  G L 
Sbjct: 185 NEIDELPSHVGYLPSLQELWLDHNQLLRLPPEIGLLKKLVCLDVSENRLEELPEEIGGLE 244

Query: 196 QLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNN 255
            L  L LS N LE+LP  IS L  L  L L  N+L TL   I    C+   ++ L+L  N
Sbjct: 245 CLTDLHLSQNLLETLPNGISKLTNLSILKLDQNRLHTLNDSIGC--CV--HMQELILTEN 300

Query: 256 KLRTLPTEIITLKCLSELSLRDNPLV 281
            L  LP  +  +  L+ L++  N LV
Sbjct: 301 FLSELPATVGNMLVLNNLNVDRNSLV 326



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/203 (32%), Positives = 98/203 (48%), Gaps = 8/203 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L HN L   P        L  LD+S NR+  LP+ I     L+ L    NLL  E+LP
Sbjct: 203 LWLDHNQLLRLPPEIGLLKKLVCLDVSENRLEELPEEIGGLECLTDLHLSQNLL--ETLP 260

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             +S L NL +  L  N+L      I     ++ L L  N L+ +P  +  +  L+ L++
Sbjct: 261 NGISKLTNLSILKLDQNRLHTLNDSIGCCVHMQELILTENFLSELPATVGNMLVLNNLNV 320

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             NSL  +P   G+  QL  L L +N+L  LPA + N   L  L +  N L+ LP  ++ 
Sbjct: 321 DRNSLVAVPSELGNCRQLGVLSLRENKLTRLPAELGNCGELHVLDVSGNLLQHLPYSLVN 380

Query: 240 LKCLSEKLKSLLLHNNKLRTLPT 262
           L     +LK++ L  N+ + +PT
Sbjct: 381 L-----QLKAVWLSENQSQPVPT 398



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 65/207 (31%), Positives = 91/207 (43%), Gaps = 15/207 (7%)

Query: 82  RSLDLSNNRITHLPQAITNFPLSTLIARNNL----LTA---ESLPKDMSNLKNLKVFNLS 134
           R ++  +NR + LP    N P       N+L    L A     LPK    L  L+   LS
Sbjct: 13  RQIEYVDNRHSSLP----NVPEEIFRYSNSLEELLLDANHIRDLPKGFFRLYRLRKLGLS 68

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
            N + + P  I +   L  L +  N +  +P +I  L  L +     N ++ +P  F  L
Sbjct: 69  DNDIIKIPSDIQNFVNLVELDVSRNEIGDIPEDIKHLRSLQIADFSSNPISRLPAGFTQL 128

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
             L  L L+D  L SLP     L  L SL L  N L+ LP  I  L     KL+ L L +
Sbjct: 129 RNLTVLGLNDMSLISLPQDFGCLSKLVSLELRENLLKNLPESISQLT----KLERLDLGD 184

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPLV 281
           N++  LP+ +  L  L EL L  N L+
Sbjct: 185 NEIDELPSHVGYLPSLQELWLDHNQLL 211


>gi|351715294|gb|EHB18213.1| hypothetical protein GW7_20513, partial [Heterocephalus glaber]
          Length = 863

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 121/225 (53%), Gaps = 10/225 (4%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L  N L+ FPD+     NL+ L+L  N+   +P +I+N   L  LI   N    E+ P
Sbjct: 520 LELNENKLTVFPDHLCSLINLKFLNLGKNQTRKIPPSISNMVSLHVLILCCNKF--ETFP 577

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
           +++  L+ L+V ++S NQL   P +I ++  ++ L   +N   H P E+ +L  L  L +
Sbjct: 578 RELCILEKLQVLDISENQLWTIPSEICNLKGVQKLNFSSNQFIHFPTELCQLQSLEELDI 637

Query: 180 G---GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
               G  LT +P+   ++ QL+ L +S+N ++ +P +I  L+ L S   +NN++  LP  
Sbjct: 638 SQSNGTKLTRLPEELSNMTQLKKLDISNNAIKEIPRNIGELRSLVSFYAYNNQISYLPLS 697

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            +TLK    +L+ L L  N L  LP+ I  L  L E++  DNPL+
Sbjct: 698 FLTLK----ELQQLSLSGNNLTALPSAIHNLVSLKEINFDDNPLL 738



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 85/274 (31%), Positives = 137/274 (50%), Gaps = 25/274 (9%)

Query: 46  LPNNDYNKKPENI------DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L  N   K PE I      + L L  N L   P N  K  NLR L ++ N +  + + I+
Sbjct: 384 LDKNLAKKIPERISYCVMLERLSLSDNKLIELPKNIYKLKNLRKLHVNRNYMVRITEDIS 443

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
           +   + +L    N++  +++P ++ N + L    L+ N+++QFP+ +  + +L YL    
Sbjct: 444 HLNNICSLEFSGNII--KNIPIEIKNCRKLTKVELNYNKIQQFPVGLCALDSLYYLSFNG 501

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           NS++ +P +++   +L  L L  N LT  PD    L  L+ L L  NQ   +P SISN+ 
Sbjct: 502 NSISEIPVDVSFSKQLVHLELNENKLTVFPDHLCSLINLKFLNLGKNQTRKIPPSISNMV 561

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L  L+L  NK  T P E+    C+ EKL+ L +  N+L T+P+EI  LK + +L+   N
Sbjct: 562 SLHVLILCCNKFETFPREL----CILEKLQVLDISENQLWTIPSEICNLKGVQKLNFSSN 617

Query: 279 PLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQ 312
             +        + P  L +L S    + E+D SQ
Sbjct: 618 QFI--------HFPTELCQLQS----LEELDISQ 639



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 82/256 (32%), Positives = 126/256 (49%), Gaps = 28/256 (10%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI----------------TNF 101
           ++ + L  N LS  P     F NLR L++S+N+I+H+P+ I                 NF
Sbjct: 194 LEIISLRDNELSSLPCEILLFHNLRILNVSHNQISHIPKEILHLGNIRQLFLNDSYIENF 253

Query: 102 PLSTLIARNNL----LTAESL---PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYL 154
           P   + +  NL    L+   L   P  + NL+NL++ +L  N+L  FP  +  +P L  L
Sbjct: 254 PSPGIESLRNLEILSLSKNKLRHIPNTLPNLQNLRILDLEYNKLTIFPKALCFLPKLISL 313

Query: 155 YLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASI 214
            L  N +  +P+EI +L  L  L L  N LT +      L +++ L L+DN+LE +   I
Sbjct: 314 NLTGNMIGSLPKEIRELKSLENLLLDHNKLTFLAVEIFQLNKIKELQLTDNKLEVISHKI 373

Query: 215 SNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
            N K L+ L L  N  + +P  I    C+   L+ L L +NKL  LP  I  LK L +L 
Sbjct: 374 ENFKELRILTLDKNLAKKIPERISY--CV--MLERLSLSDNKLIELPKNIYKLKNLRKLH 429

Query: 275 LRDNPLVIRFVSDMTY 290
           +  N +V R   D+++
Sbjct: 430 VNRNYMV-RITEDISH 444



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 138/299 (46%), Gaps = 39/299 (13%)

Query: 17  DSFKTVSIKTLDFSYSSLDSETLATQIEL------------LPNNDYNKKPENIDTLLLY 64
           ++FK + I TLD + +    E ++  + L            LP N Y  K +N+  L + 
Sbjct: 374 ENFKELRILTLDKNLAKKIPERISYCVMLERLSLSDNKLIELPKNIY--KLKNLRKLHVN 431

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN----------------FPLSTLIA 108
            N +    ++ S   N+ SL+ S N I ++P  I N                FP+  L A
Sbjct: 432 RNYMVRITEDISHLNNICSLEFSGNIIKNIPIEIKNCRKLTKVELNYNKIQQFPVG-LCA 490

Query: 109 RNNLL-------TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            ++L        +   +P D+S  K L    L+ N+L  FP  +  +  LK+L LG N  
Sbjct: 491 LDSLYYLSFNGNSISEIPVDVSFSKQLVHLELNENKLTVFPDHLCSLINLKFLNLGKNQT 550

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +P  I+ +  LHVL L  N     P     L +L+ L +S+NQL ++P+ I NLK ++
Sbjct: 551 RKIPPSISNMVSLHVLILCCNKFETFPRELCILEKLQVLDISENQLWTIPSEICNLKGVQ 610

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            L   +N+    PTE+  L+ L E+L     +  KL  LP E+  +  L +L + +N +
Sbjct: 611 KLNFSSNQFIHFPTELCQLQSL-EELDISQSNGTKLTRLPEELSNMTQLKKLDISNNAI 668



 Score = 68.6 bits (166), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 108/248 (43%), Gaps = 30/248 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L L  N L   P+      NLR LDL  N++T  P+A+   P L +L    N++  
Sbjct: 263 NLEILSLSKNKLRHIPNTLPNLQNLRILDLEYNKLTIFPKALCFLPKLISLNLTGNMIG- 321

Query: 116 ESLPKDMSNLKNL-----------------------KVFNLSGNQLEQFPIQILDIPTLK 152
            SLPK++  LK+L                       K   L+ N+LE    +I +   L+
Sbjct: 322 -SLPKEIRELKSLENLLLDHNKLTFLAVEIFQLNKIKELQLTDNKLEVISHKIENFKELR 380

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            L L  N    +P  I+    L  LSL  N L ++P     L  L  L ++ N +  +  
Sbjct: 381 ILTLDKNLAKKIPERISYCVMLERLSLSDNKLIELPKNIYKLKNLRKLHVNRNYMVRITE 440

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSE 272
            IS+L  + SL    N ++ +P EI   +    KL  + L+ NK++  P  +  L  L  
Sbjct: 441 DISHLNNICSLEFSGNIIKNIPIEIKNCR----KLTKVELNYNKIQQFPVGLCALDSLYY 496

Query: 273 LSLRDNPL 280
           LS   N +
Sbjct: 497 LSFNGNSI 504



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 48/170 (28%), Positives = 84/170 (49%), Gaps = 2/170 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLL 113
           E +  L +  N L   P        ++ L+ S+N+  H P  +     L  L I+++N  
Sbjct: 584 EKLQVLDISENQLWTIPSEICNLKGVQKLNFSSNQFIHFPTELCQLQSLEELDISQSNGT 643

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP+++SN+  LK  ++S N +++ P  I ++ +L   Y  NN ++++P     L +
Sbjct: 644 KLTRLPEELSNMTQLKKLDISNNAIKEIPRNIGELRSLVSFYAYNNQISYLPLSFLTLKE 703

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL 223
           L  LSL GN+LT +P    +L  L+ +   DN L + P  I   K L ++
Sbjct: 704 LQQLSLSGNNLTALPSAIHNLVSLKEINFDDNPLLTPPMEICEGKQLYTI 753



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 71/250 (28%), Positives = 105/250 (42%), Gaps = 51/250 (20%)

Query: 132 NLSGNQLEQFPIQILDIPTLKYLYLGN------------------------NSLNHVPRE 167
           NL    L++FP   L +  +KYLYL N                        N L+ +P E
Sbjct: 151 NLEAKGLQEFPKDSLKVKHVKYLYLDNNKIKTFQGADLNDLLGLEIISLRDNELSSLPCE 210

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA-SISNLKMLKSLLLH 226
           I     L +L++  N ++ IP     L  +  L L+D+ +E+ P+  I +L+ L+ L L 
Sbjct: 211 ILLFHNLRILNVSHNQISHIPKEILHLGNIRQLFLNDSYIENFPSPGIESLRNLEILSLS 270

Query: 227 NNKLRTLPTEIITLK-------------------CLSEKLKSLLLHNNKLRTLPTEIITL 267
            NKLR +P  +  L+                   C   KL SL L  N + +LP EI  L
Sbjct: 271 KNKLRHIPNTLPNLQNLRILDLEYNKLTIFPKALCFLPKLISLNLTGNMIGSLPKEIREL 330

Query: 268 KCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKV--HEIDYSQE----HLPQNLVQ 321
           K L  L L  N L    V          L+L    L+V  H+I+  +E     L +NL +
Sbjct: 331 KSLENLLLDHNKLTFLAVEIFQLNKIKELQLTDNKLEVISHKIENFKELRILTLDKNLAK 390

Query: 322 YL-ESAHHCV 330
            + E   +CV
Sbjct: 391 KIPERISYCV 400



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 3/112 (2%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLK 126
           L+  P+  S  T L+ LD+SNN I  +P+ I     L +  A NN ++   LP     LK
Sbjct: 645 LTRLPEELSNMTQLKKLDISNNAIKEIPRNIGELRSLVSFYAYNNQISY--LPLSFLTLK 702

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
            L+  +LSGN L   P  I ++ +LK +   +N L   P EI +  +L+ ++
Sbjct: 703 ELQQLSLSGNNLTALPSAIHNLVSLKEINFDDNPLLTPPMEICEGKQLYTIA 754


>gi|47228901|emb|CAG09416.1| unnamed protein product [Tetraodon nigroviridis]
          Length = 452

 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 73/223 (32%), Positives = 122/223 (54%), Gaps = 9/223 (4%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF- 101
           +++LP N  N    N+ +L L  N L+F P++ S    L  LDL NN +  LP++I +  
Sbjct: 140 LQVLPENIGNLA--NLVSLELRENLLTFLPESLSMLHRLEELDLGNNELYSLPESIGHLV 197

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L  L    N LT   +P +M ++KNL   ++S N++E+ P ++  + +L  L +  N +
Sbjct: 198 GLKDLWLDGNQLT--EIPAEMGSMKNLLCLDVSENKIERLPEELGGLLSLADLLVSQNLI 255

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
           + +P  I KL KL +L    N LT +P++ G+   L  L+L++N+++SLP SI  LK L 
Sbjct: 256 DALPESIGKLRKLSILKADQNRLTYLPESIGNCESLTELVLTENKIQSLPRSIGKLKQLF 315

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           +     N+L +LP EI       + L    +  N+L  +P+E+
Sbjct: 316 NFNCDRNQLTSLPKEIGG----CQSLNVFCVRENRLTRIPSEL 354



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 79/236 (33%), Positives = 121/236 (51%), Gaps = 10/236 (4%)

Query: 45  LLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PL 103
            +P+  Y +   +++ LLL  N L   P        LR L LS+N I  +P  I NF  L
Sbjct: 26  FVPDEIY-RYERSLEELLLDANQLRDLPKQFFHLVKLRKLGLSDNEIQRIPPEIANFMEL 84

Query: 104 STL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLN 162
             L ++RN+++    +P+ +S    L+V + SGN L + P     +  L  L + + SL 
Sbjct: 85  VELDVSRNDIM---EIPESISFCSALQVADFSGNPLTRLPESFPKLRNLTCLSINDISLQ 141

Query: 163 HVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKS 222
            +P  I  L  L  L L  N LT +P++   L++LE L L +N+L SLP SI +L  LK 
Sbjct: 142 VLPENIGNLANLVSLELRENLLTFLPESLSMLHRLEELDLGNNELYSLPESIGHLVGLKD 201

Query: 223 LLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           L L  N+L  +P E+ ++K     L  L +  NK+  LP E+  L  L++L +  N
Sbjct: 202 LWLDGNQLTEIPAEMGSMK----NLLCLDVSENKIERLPEELGGLLSLADLLVSQN 253



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 116/239 (48%), Gaps = 11/239 (4%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N++   P++ S  + L+  D S N +T LP++  
Sbjct: 66  LSDNEIQRIPPEIANFMELVELDVSRNDIMEIPESISFCSALQVADFSGNPLTRLPESFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + + LP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 126 KLRNLTCLSINDI-SLQVLPENIGNLANLVSLELRENLLTFLPESLSMLHRLEELDLGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L  +P  I  L  L  L L GN LT+IP   G +  L  L +S+N++E LP  +  L  
Sbjct: 185 ELYSLPESIGHLVGLKDLWLDGNQLTEIPAEMGSMKNLLCLDVSENKIERLPEELGGLLS 244

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           L  LL+  N +  LP  I  L+    KL  L    N+L  LP  I   + L+EL L +N
Sbjct: 245 LADLLVSQNLIDALPESIGKLR----KLSILKADQNRLTYLPESIGNCESLTELVLTEN 299



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 69/204 (33%), Positives = 105/204 (51%), Gaps = 7/204 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N L+  P++  K  NL  L +++  +  LP+ I N   L +L  R NLLT   LP+ +S 
Sbjct: 115 NPLTRLPESFPKLRNLTCLSINDISLQVLPENIGNLANLVSLELRENLLTF--LPESLSM 172

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L  L+  +L  N+L   P  I  +  LK L+L  N L  +P E+  +  L  L +  N +
Sbjct: 173 LHRLEELDLGNNELYSLPESIGHLVGLKDLWLDGNQLTEIPAEMGSMKNLLCLDVSENKI 232

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
             +P+  G L  L  L++S N +++LP SI  L+ L  L    N+L  LP  I   + L+
Sbjct: 233 ERLPEELGGLLSLADLLVSQNLIDALPESIGKLRKLSILKADQNRLTYLPESIGNCESLT 292

Query: 245 EKLKSLLLHNNKLRTLPTEIITLK 268
           E    L+L  NK+++LP  I  LK
Sbjct: 293 E----LVLTENKIQSLPRSIGKLK 312



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/163 (34%), Positives = 82/163 (50%), Gaps = 4/163 (2%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LPK   +L  L+   LS N++++ P +I +   L  L +  N +  +P  I+    L V 
Sbjct: 51  LPKQFFHLVKLRKLGLSDNEIQRIPPEIANFMELVELDVSRNDIMEIPESISFCSALQVA 110

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
              GN LT +P++F  L  L  L ++D  L+ LP +I NL  L SL L  N L  LP  +
Sbjct: 111 DFSGNPLTRLPESFPKLRNLTCLSINDISLQVLPENIGNLANLVSLELRENLLTFLPESL 170

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             L     +L+ L L NN+L +LP  I  L  L +L L  N L
Sbjct: 171 SML----HRLEELDLGNNELYSLPESIGHLVGLKDLWLDGNQL 209



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/191 (29%), Positives = 87/191 (45%), Gaps = 9/191 (4%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN+    PE+I  L+      L  N L+  P       NL  LD+S N+I  LP+ + 
Sbjct: 181 LGNNELYSLPESIGHLVGLKDLWLDGNQLTEIPAEMGSMKNLLCLDVSENKIERLPEELG 240

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L+ L+   NL+ A  LP+ +  L+ L +     N+L   P  I +  +L  L L  
Sbjct: 241 GLLSLADLLVSQNLIDA--LPESIGKLRKLSILKADQNRLTYLPESIGNCESLTELVLTE 298

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N +  +PR I KL +L   +   N LT +P   G    L    + +N+L  +P+ +S   
Sbjct: 299 NKIQSLPRSIGKLKQLFNFNCDRNQLTSLPKEIGGCQSLNVFCVRENRLTRIPSELSQAT 358

Query: 219 MLKSLLLHNNK 229
            L  L +  N+
Sbjct: 359 ELHVLDVSGNR 369



 Score = 44.3 bits (103), Expect = 0.094,   Method: Compositional matrix adjust.
 Identities = 39/119 (32%), Positives = 55/119 (46%), Gaps = 5/119 (4%)

Query: 160 SLNHVPREINKLCK-LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           SL  VP EI +  + L  L L  N L D+P  F  L +L  L LSDN+++ +P  I+N  
Sbjct: 23  SLLFVPDEIYRYERSLEELLLDANQLRDLPKQFFHLVKLRKLGLSDNEIQRIPPEIANFM 82

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRD 277
            L  L +  N +  +P  I         L+      N L  LP     L+ L+ LS+ D
Sbjct: 83  ELVELDVSRNDIMEIPESI----SFCSALQVADFSGNPLTRLPESFPKLRNLTCLSIND 137


>gi|387016666|gb|AFJ50452.1| Protein LAP2 [Crotalus adamanteus]
          Length = 1450

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 80/239 (33%), Positives = 120/239 (50%), Gaps = 15/239 (6%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L      +N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDDNKLTL--VP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             M +LK+L   ++S N +E     +    +L+ L L +NSL  +P  I  L KL VL +
Sbjct: 224 GFMGSLKHLTYLDISKNNIETLEEGVSGCESLQDLLLSSNSLQQLPESIGCLKKLTVLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  +++    +N L  LP EI  
Sbjct: 284 DENQLMYLPDSIGGLIAIEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPPEIGN 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLEL 298
            K ++     L LH+NKL  LP E+  ++ L  ++L DN L         Y P S+L+L
Sbjct: 344 WKYVT----VLFLHSNKLEVLPEEMGDMQKLKVINLSDNRL--------KYLPYSILQL 390



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 83/293 (28%), Positives = 127/293 (43%), Gaps = 60/293 (20%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++  LD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTALDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLYKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKN 127
           L+  P + +   NLR LD+S N I                        +  P+++ N K 
Sbjct: 81  LTTLPASIANLINLRELDVSKNGI------------------------QEFPENIKNCKV 116

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           L +   S N + + P     +  L  LYL +  L  +P    +L KL +L L  N L  +
Sbjct: 117 LAIVEASVNPISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKML 176

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS--- 244
           P T   L QLE L L  N+   +P  +  L  LK   + +NKL  +P  + +LK L+   
Sbjct: 177 PKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDDNKLTLVPGFMGSLKHLTYLD 236

Query: 245 ----------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                           E L+ LLL +N L+ LP  I  LK L+ L + +N L+
Sbjct: 237 ISKNNIETLEEGVSGCESLQDLLLSSNSLQQLPESIGCLKKLTVLKIDENQLM 289



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 8/202 (3%)

Query: 83  SLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           +LD S+  +  +P+ I  F   L  L    N +  E LPK + N ++L   +L  N L  
Sbjct: 26  ALDYSHCSLEQVPKEIFTFEKTLEELYLDANQI--EELPKQLFNCQSLYKLSLPDNDLTT 83

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P  I ++  L+ L +  N +   P  I     L ++    N ++ +PD F  L  L  L
Sbjct: 84  LPASIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPDGFSQLLNLTQL 143

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L+D  LE LPA+   L  L+ L L  N+L+ LP  +  L     +L+ L L +N+   +
Sbjct: 144 YLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLT----QLERLDLGSNEFTEV 199

Query: 261 PTEIITLKCLSELSLRDNPLVI 282
           P  +  L  L E  + DN L +
Sbjct: 200 PEVLEQLSGLKEFWMDDNKLTL 221



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 53/175 (30%), Positives = 89/175 (50%), Gaps = 5/175 (2%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTL--IARNNLLTAESL 118
           L +  NN+    +  S   +L+ L LS+N +  LP++I      T+  I  N L+    L
Sbjct: 235 LDISKNNIETLEEGVSGCESLQDLLLSSNSLQQLPESIGCLKKLTVLKIDENQLMY---L 291

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P  +  L  ++  + S N++E  P  I  +  ++     +N L  +P EI     + VL 
Sbjct: 292 PDSIGGLIAIEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPPEIGNWKYVTVLF 351

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  N L  +P+  GD+ +L+ + LSDN+L+ LP SI  L+ L +L L +N+ + L
Sbjct: 352 LHSNKLEVLPEEMGDMQKLKVINLSDNRLKYLPYSILQLQHLTALWLSDNQSKPL 406


>gi|350422758|ref|XP_003493273.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Bombus
           impatiens]
          Length = 610

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/228 (36%), Positives = 121/228 (53%), Gaps = 10/228 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNA-SKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           ++ T+ L  N  + +P    ++FTN+ S++L +N+I  +P AI +    L+ L  + N L
Sbjct: 361 DLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYAIFSRAKNLAKLNMKENQL 420

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA  LP D+    N+   NL  NQL + P  I  +  L+ L L NN L  +P  I  L K
Sbjct: 421 TA--LPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRK 478

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L VL L  N +  +P+  G L  L+ LIL  NQ+ SLP +I +L  L  L +  N L  L
Sbjct: 479 LRVLDLEENKIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYL 538

Query: 234 PTEIITLKCLSEKLKSLLLHNNK-LRTLPTEIITLKCLSELSLRDNPL 280
           P EI TL    E L SL +++N  L  LP E+     LS +S+ + PL
Sbjct: 539 PEEIGTL----ENLDSLYVNDNANLHNLPFELALCTNLSIMSIENCPL 582



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 131/273 (47%), Gaps = 9/273 (3%)

Query: 9   SSSDSSDSDSFKTVSIKTLDFSYSSLDSETLAT-QIELLPNNDYNK-KPENIDTLLLYHN 66
           SS+  +  D+ KTV++K  + +     ++     Q +L  + ++ + K E ++ L L  +
Sbjct: 80  SSASIAGPDTKKTVTVKHPESNKPKPTTKKGKPIQADLDVSKEFTRCKEECLERLDLSKS 139

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNL 125
           N++  P      T+L    L  N++  LP  I     L TL    N LT  SLP  + NL
Sbjct: 140 NITHLPSTVRDLTHLVEFYLYGNKLVTLPPEIGCLGNLETLALSENSLT--SLPNTLENL 197

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           K+L+V +L  N+L + P  +  +  L  L+L  N + +V   I  L  L +LSL  N + 
Sbjct: 198 KSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIR 257

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           ++P   G L  L    +S N LE LP  I N   L +L L +N+L  +P  I  L  L+ 
Sbjct: 258 ELPAGIGKLVNLITFDISHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIGRLVSLTR 317

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
               L L  N+L ++P  +   K + E S+  N
Sbjct: 318 ----LGLRYNRLTSIPKSLANCKLMDEFSVEGN 346



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 11/184 (5%)

Query: 14  SDSDSFKTVSIKTLDFSYSSLDSETLATQIEL-LPNNDYNKKP------ENIDTLLLYHN 66
           S + +   +++K    +   LD  T    +EL L  N   K P      +N++ L+L +N
Sbjct: 405 SRAKNLAKLNMKENQLTALPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQNLEVLILSNN 464

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNL 125
            L   P + +    LR LDL  N+I  LP  I     L  LI ++N +T  SLP+ + +L
Sbjct: 465 LLKRIPASIANLRKLRVLDLEENKIESLPNEIGFLRDLQKLILQSNQVT--SLPRAIGHL 522

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS-LNHVPREINKLCKLHVLSLGGNSL 184
            NL   ++  N L   P +I  +  L  LY+ +N+ L+++P E+     L ++S+    L
Sbjct: 523 TNLTYLSVGENNLNYLPEEIGTLENLDSLYVNDNANLHNLPFELALCTNLSIMSIENCPL 582

Query: 185 TDIP 188
           + IP
Sbjct: 583 SHIP 586


>gi|241623176|ref|XP_002407534.1| leucine rich domain-containing protein, putative [Ixodes
           scapularis]
 gi|215501009|gb|EEC10503.1| leucine rich domain-containing protein, putative [Ixodes
           scapularis]
          Length = 1327

 Score =  103 bits (258), Expect = 1e-19,   Method: Composition-based stats.
 Identities = 76/225 (33%), Positives = 112/225 (49%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ +L L  N L   P + +    L  LDL +N    LP  I     L  L   +N L+ 
Sbjct: 59  NLMSLELRENYLKGLPLSFAFLVKLERLDLGSNDFEELPVVIGQLSSLQELWLDSNELS- 117

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LPK++  L+ L   ++S N+L   P ++ D+ +L  L+L  N L  +P E+ +L KL 
Sbjct: 118 -TLPKEIGQLRRLMCLDVSENKLSSLPDELCDLESLTDLHLSQNYLEVLPEEMGRLRKLT 176

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +  +  N L  +P + GD   L+ LIL+DN L  LP S+  L  L +L    N+L  LP 
Sbjct: 177 IFKVDQNRLGSLPASIGDCESLQELILTDNLLTELPESVGQLVNLTNLNADCNQLSELPP 236

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +I  L     +L  L L  N L+ LP E  TL+ L  L +  N L
Sbjct: 237 QIGQLA----RLGVLSLRENCLQKLPPETGTLRRLHVLDVSGNRL 277



 Score =  102 bits (254), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 69/209 (33%), Positives = 102/209 (48%), Gaps = 5/209 (2%)

Query: 72  PDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVF 131
           P+N     +L+S D S+N ++ LP         T++  N++ +   LP D   L NL   
Sbjct: 5   PENIKYLKSLQSADFSSNPLSKLPAGFVQLRSLTVLGLNDV-SLTQLPHDFGGLSNLMSL 63

Query: 132 NLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTF 191
            L  N L+  P+    +  L+ L LG+N    +P  I +L  L  L L  N L+ +P   
Sbjct: 64  ELRENYLKGLPLSFAFLVKLERLDLGSNDFEELPVVIGQLSSLQELWLDSNELSTLPKEI 123

Query: 192 GDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLL 251
           G L +L  L +S+N+L SLP  + +L+ L  L L  N L  LP E+  L+    KL    
Sbjct: 124 GQLRRLMCLDVSENKLSSLPDELCDLESLTDLHLSQNYLEVLPEEMGRLR----KLTIFK 179

Query: 252 LHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +  N+L +LP  I   + L EL L DN L
Sbjct: 180 VDQNRLGSLPASIGDCESLQELILTDNLL 208



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Composition-based stats.
 Identities = 67/218 (30%), Positives = 106/218 (48%), Gaps = 14/218 (6%)

Query: 46  LPNNDYNKKP------ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +ND+ + P       ++  L L  N LS  P    +   L  LD+S N+++ LP  + 
Sbjct: 88  LGSNDFEELPVVIGQLSSLQELWLDSNELSTLPKEIGQLRRLMCLDVSENKLSSLPDELC 147

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
           +   L+ L    N L  E LP++M  L+ L +F +  N+L   P  I D  +L+ L L +
Sbjct: 148 DLESLTDLHLSQNYL--EVLPEEMGRLRKLTIFKVDQNRLGSLPASIGDCESLQELILTD 205

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P  + +L  L  L+   N L+++P   G L +L  L L +N L+ LP     L+
Sbjct: 206 NLLTELPESVGQLVNLTNLNADCNQLSELPPQIGQLARLGVLSLRENCLQKLPPETGTLR 265

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
            L  L +  N+L+ LP  +  L      LK+L L  N+
Sbjct: 266 RLHVLDVSGNRLQHLPLTVTAL-----NLKALWLAKNQ 298



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Composition-based stats.
 Identities = 58/167 (34%), Positives = 88/167 (52%), Gaps = 4/167 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           + +P+++  LK+L+  + S N L + P   + + +L  L L + SL  +P +   L  L 
Sbjct: 2   QEIPENIKYLKSLQSADFSSNPLSKLPAGFVQLRSLTVLGLNDVSLTQLPHDFGGLSNLM 61

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L  +P +F  L +LE L L  N  E LP  I  L  L+ L L +N+L TLP 
Sbjct: 62  SLELRENYLKGLPLSFAFLVKLERLDLGSNDFEELPVVIGQLSSLQELWLDSNELSTLPK 121

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           EI  L+    +L  L +  NKL +LP E+  L+ L++L L  N L +
Sbjct: 122 EIGQLR----RLMCLDVSENKLSSLPDELCDLESLTDLHLSQNYLEV 164



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Composition-based stats.
 Identities = 61/186 (32%), Positives = 87/186 (46%), Gaps = 21/186 (11%)

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           +++ P  I  + +L+     +N L+ +P    +L  L VL L   SLT +P  FG L  L
Sbjct: 1   VQEIPENIKYLKSLQSADFSSNPLSKLPAGFVQLRSLTVLGLNDVSLTQLPHDFGGLSNL 60

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
            +L L +N L+ LP S + L  L+ L L +N    LP  I  L  L E    L L +N+L
Sbjct: 61  MSLELRENYLKGLPLSFAFLVKLERLDLGSNDFEELPVVIGQLSSLQE----LWLDSNEL 116

Query: 258 RTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQ 317
            TLP EI  L+ L  L + +N L        +  P  L +L S T           HL Q
Sbjct: 117 STLPKEIGQLRRLMCLDVSENKL--------SSLPDELCDLESLT---------DLHLSQ 159

Query: 318 NLVQYL 323
           N ++ L
Sbjct: 160 NYLEVL 165


>gi|189533883|ref|XP_001335202.2| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           homolog [Danio rerio]
          Length = 992

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 87/270 (32%), Positives = 133/270 (49%), Gaps = 20/270 (7%)

Query: 13  SSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFP 72
           S D D  K   +K L FS++ +  + L +QI  L         ++++ L +  N L  FP
Sbjct: 110 SEDIDLLK--GLKKLCFSHNKI--QYLPSQIGTL---------QSLEELDISFNELHDFP 156

Query: 73  DNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVF 131
            + S+   LR+LD+ +N++   P  I     L  L    N L  E LP ++  L+++K+ 
Sbjct: 157 RSFSQLRKLRTLDVDHNKLQRFPSEILALSDLEELDCSGNKL--EGLPGNIMMLQSIKIL 214

Query: 132 NLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTF 191
            LS   L   P    ++  L+ L L NN L  +P+   KL KL +L+L  NS  D P   
Sbjct: 215 WLSSTHLLSLPETFCELQNLESLMLDNNFLTRLPQSFGKLQKLKMLNLSSNSFEDFPQVI 274

Query: 192 GDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLL 251
             L +LE L LS N+L  LP  +  L  L +L L NN +  LP  I+ L     KL+ L+
Sbjct: 275 IKLTRLEELYLSRNKLTFLPEEVGQLCNLANLWLDNNSITFLPDSIVELG----KLEELV 330

Query: 252 LHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L  N++  LP     L  ++   ++DNPL+
Sbjct: 331 LQGNQIAILPDNFGKLAKVNIWKVKDNPLI 360



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 79/237 (33%), Positives = 118/237 (49%), Gaps = 17/237 (7%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTAESLPKDM 122
           HN L+ F ++      L+ L  S+N+I +LP  I     L  L I+ N L      P+  
Sbjct: 103 HNCLNHFSEDIDLLKGLKKLCFSHNKIQYLPSQIGTLQSLEELDISFNEL---HDFPRSF 159

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
           S L+ L+  ++  N+L++FP +IL +  L+ L    N L  +P  I  L  + +L L   
Sbjct: 160 SQLRKLRTLDVDHNKLQRFPSEILALSDLEELDCSGNKLEGLPGNIMMLQSIKILWLSST 219

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            L  +P+TF +L  LE+L+L +N L  LP S   L+ LK L L +N     P  II L  
Sbjct: 220 HLLSLPETFCELQNLESLMLDNNFLTRLPQSFGKLQKLKMLNLSSNSFEDFPQVIIKLT- 278

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELA 299
              +L+ L L  NKL  LP E+  L  L+ L L +N         +T+ P S++EL 
Sbjct: 279 ---RLEELYLSRNKLTFLPEEVGQLCNLANLWLDNN--------SITFLPDSIVELG 324



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 68/204 (33%), Positives = 98/204 (48%), Gaps = 26/204 (12%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLP------QAITNFPLST------ 105
           + TL + HN L  FP      ++L  LD S N++  LP      Q+I    LS+      
Sbjct: 165 LRTLDVDHNKLQRFPSEILALSDLEELDCSGNKLEGLPGNIMMLQSIKILWLSSTHLLSL 224

Query: 106 ------------LIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKY 153
                       L+  NN LT   LP+    L+ LK+ NLS N  E FP  I+ +  L+ 
Sbjct: 225 PETFCELQNLESLMLDNNFLT--RLPQSFGKLQKLKMLNLSSNSFEDFPQVIIKLTRLEE 282

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           LYL  N L  +P E+ +LC L  L L  NS+T +PD+  +L +LE L+L  NQ+  LP +
Sbjct: 283 LYLSRNKLTFLPEEVGQLCNLANLWLDNNSITFLPDSIVELGKLEELVLQGNQIAILPDN 342

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEI 237
              L  +    + +N L   P E+
Sbjct: 343 FGKLAKVNIWKVKDNPLIQPPYEV 366



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 67/200 (33%), Positives = 99/200 (49%), Gaps = 11/200 (5%)

Query: 79  TNLRSLDLS--NNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM-SNLKNLKVFNLSG 135
           +NLR L LS  N++   LP+ I    +  L   NN L  + LP+ + S L  L++  L  
Sbjct: 25  SNLRQLTLSTKNSQKITLPEDIKE--IEVLNLGNNSL--QELPEGLGSTLTKLRILILRR 80

Query: 136 NQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLY 195
           N+    P  +  +  L  L + +N LNH   +I+ L  L  L    N +  +P   G L 
Sbjct: 81  NKFAIVPSAVFQLSQLVELDISHNCLNHFSEDIDLLKGLKKLCFSHNKIQYLPSQIGTLQ 140

Query: 196 QLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNN 255
            LE L +S N+L   P S S L+ L++L + +NKL+  P+EI+ L  L E    L    N
Sbjct: 141 SLEELDISFNELHDFPRSFSQLRKLRTLDVDHNKLQRFPSEILALSDLEE----LDCSGN 196

Query: 256 KLRTLPTEIITLKCLSELSL 275
           KL  LP  I+ L+ +  L L
Sbjct: 197 KLEGLPGNIMMLQSIKILWL 216


>gi|301609363|ref|XP_002934234.1| PREDICTED: protein LAP2 [Xenopus (Silurana) tropicalis]
          Length = 1359

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 112/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTY--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + NLK L   ++S N +E     I    +L+ L L +N++  +P  I  L KL  L +
Sbjct: 224 GFLGNLKQLTYLDVSKNNIEMVEDGISGCESLQDLLLSSNAIQQLPESIGALKKLTTLKV 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI +L  +++    +N L  LP EI T
Sbjct: 284 DENQLMYLPDSIGGLTAIEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPPEIGT 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K  +     L LH+NKL +LP E+  ++ L  ++L DN L
Sbjct: 344 WKSAT----VLFLHSNKLESLPEEMGDMQKLKVINLSDNRL 380



 Score = 97.8 bits (242), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 133/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ +LD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTSLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTILPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    + LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLDFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    + GN LT IP   G+L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDGNKLTYIPGFLGNLKQLTYLDVSKNNIEMVEDGISGCESLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N ++ LP  I  LK    KL +L +  N+L  LP  I  L  + +L
Sbjct: 261 SSNAIQQLPESIGALK----KLTTLKVDENQLMYLPDSIGGLTAIEDL 304



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 15/229 (6%)

Query: 41  TQIELL--PNNDYNKKPENIDTL------LLYHNNLSFFPDNASKFTNLRSLDLSNNRIT 92
           TQ+E L   +N++ + PE ++ L       +  N L++ P        L  LD+S N I 
Sbjct: 184 TQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTYIPGFLGNLKQLTYLDVSKNNIE 243

Query: 93  HLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
            +   I+    L  L+  +N +  + LP+ +  LK L    +  NQL   P  I  +  +
Sbjct: 244 MVEDGISGCESLQDLLLSSNAI--QQLPESIGALKKLTTLKVDENQLMYLPDSIGGLTAI 301

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           + L    N +  +P  I  L ++   +   N LT +P   G       L L  N+LESLP
Sbjct: 302 EDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPPEIGTWKSATVLFLHSNKLESLP 361

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
             + +++ LK + L +N+LR LP     L    ++L ++ L +N+ + L
Sbjct: 362 EEMGDMQKLKVINLSDNRLRNLPFSFTRL----QQLTAMWLSDNQSKPL 406


>gi|260812948|ref|XP_002601182.1| hypothetical protein BRAFLDRAFT_214464 [Branchiostoma floridae]
 gi|229286473|gb|EEN57194.1| hypothetical protein BRAFLDRAFT_214464 [Branchiostoma floridae]
          Length = 462

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 120/225 (53%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
            ++ L L  N L   P    + TN++ L+LS+ ++  LP  +     L  L   +N L  
Sbjct: 24  QLEWLDLSSNPLQTLPAEVGQLTNVKHLNLSHCQLRTLPPEVGRLTQLEWLDLSSNPL-- 81

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ++LP ++  L N+K  +LS  QL   P+++  +  L++L L +N L  +P E+ +L  + 
Sbjct: 82  QTLPAEVGQLTNVKHLDLSHCQLHTLPLEVWKLTQLEWLDLSSNPLQTLPAEVGQLTNVK 141

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L    L  +P   G L QLE L LS N L++LPA + +L  L+ L L +N L+TLP 
Sbjct: 142 HLDLSQCQLRTLPSEVGRLTQLEWLDLSSNPLQTLPAEVGHLTNLEKLDLCSNPLQTLPA 201

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           E+    C    +K L L + +LRTLP E+  L  L  L LR NPL
Sbjct: 202 EVG--HC--TNVKHLDLSHCQLRTLPFEVWKLTQLEWLDLRSNPL 242



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 88/275 (32%), Positives = 135/275 (49%), Gaps = 18/275 (6%)

Query: 7   SSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHN 66
           SS+   +  ++  +  ++K LD S+          Q+  LP   +  K   ++ L L  N
Sbjct: 77  SSNPLQTLPAEVGQLTNVKHLDLSHC---------QLHTLPLEVW--KLTQLEWLDLSSN 125

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNL 125
            L   P    + TN++ LDLS  ++  LP  +     L  L   +N L  ++LP ++ +L
Sbjct: 126 PLQTLPAEVGQLTNVKHLDLSQCQLRTLPSEVGRLTQLEWLDLSSNPL--QTLPAEVGHL 183

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
            NL+  +L  N L+  P ++     +K+L L +  L  +P E+ KL +L  L L  N L 
Sbjct: 184 TNLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEVWKLTQLEWLDLRSNPLQ 243

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
            +P   G L  ++ L LSD QL  LP  +  L  L+ L L +N L+TLP E+    C   
Sbjct: 244 TLPTEVGHLTNVKYLNLSDCQLHILPPEVGRLTQLEKLDLCSNPLQTLPAEVG--HC--T 299

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +K L L + +LRTLP E+  L  L  LSL  NPL
Sbjct: 300 NVKHLDLSHCQLRTLPFEVWKLTQLEWLSLSSNPL 334



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 82/260 (31%), Positives = 127/260 (48%), Gaps = 20/260 (7%)

Query: 20  KTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFT 79
           K   ++ LD S + L  +TL  ++  L          N+  L L H  L   P    + T
Sbjct: 21  KLTQLEWLDLSSNPL--QTLPAEVGQL---------TNVKHLNLSHCQLRTLPPEVGRLT 69

Query: 80  NLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE--SLPKDMSNLKNLKVFNLSGNQ 137
            L  LDLS+N +  LP  +      T +   +L   +  +LP ++  L  L+  +LS N 
Sbjct: 70  QLEWLDLSSNPLQTLPAEVGQL---TNVKHLDLSHCQLHTLPLEVWKLTQLEWLDLSSNP 126

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           L+  P ++  +  +K+L L    L  +P E+ +L +L  L L  N L  +P   G L  L
Sbjct: 127 LQTLPAEVGQLTNVKHLDLSQCQLRTLPSEVGRLTQLEWLDLSSNPLQTLPAEVGHLTNL 186

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
           E L L  N L++LPA + +   +K L L + +LRTLP E+  L     +L+ L L +N L
Sbjct: 187 EKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEVWKLT----QLEWLDLRSNPL 242

Query: 258 RTLPTEIITLKCLSELSLRD 277
           +TLPTE+  L  +  L+L D
Sbjct: 243 QTLPTEVGHLTNVKYLNLSD 262



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 78/226 (34%), Positives = 109/226 (48%), Gaps = 9/226 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           N+  L L H  L   P    K T L  LDL +N +  LP  + +    T +   NL   +
Sbjct: 208 NVKHLDLSHCQLRTLPFEVWKLTQLEWLDLRSNPLQTLPTEVGHL---TNVKYLNLSDCQ 264

Query: 117 --SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP ++  L  L+  +L  N L+  P ++     +K+L L +  L  +P E+ KL +L
Sbjct: 265 LHILPPEVGRLTQLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEVWKLTQL 324

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             LSL  N L  +P   G L  ++ L LSD QL +LP  +  L  L+ L L +N L+TLP
Sbjct: 325 EWLSLSSNPLQTLPAEVGQLTNVKQLNLSDCQLHTLPPEVGKLTQLERLDLSSNPLQTLP 384

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            E+  L      +K L L    L TLP E+  L  L  L LR NPL
Sbjct: 385 AEVGQLT----NVKHLDLSQCLLHTLPPEVGRLTQLEWLDLRSNPL 426



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 77/254 (30%), Positives = 123/254 (48%), Gaps = 20/254 (7%)

Query: 24  IKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRS 83
           +K LD S+          Q+  LP   +  K   ++ L L  N L   P      TN++ 
Sbjct: 209 VKHLDLSHC---------QLRTLPFEVW--KLTQLEWLDLRSNPLQTLPTEVGHLTNVKY 257

Query: 84  LDLSNNRITHLPQAITNFPLSTLIARNNLLT--AESLPKDMSNLKNLKVFNLSGNQLEQF 141
           L+LS+ ++  LP  +      T + + +L +   ++LP ++ +  N+K  +LS  QL   
Sbjct: 258 LNLSDCQLHILPPEVGRL---TQLEKLDLCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTL 314

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P ++  +  L++L L +N L  +P E+ +L  +  L+L    L  +P   G L QLE L 
Sbjct: 315 PFEVWKLTQLEWLSLSSNPLQTLPAEVGQLTNVKQLNLSDCQLHTLPPEVGKLTQLERLD 374

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           LS N L++LPA +  L  +K L L    L TLP E+  L     +L+ L L +N L  LP
Sbjct: 375 LSSNPLQTLPAEVGQLTNVKHLDLSQCLLHTLPPEVGRLT----QLEWLDLRSNPLHALP 430

Query: 262 TEIITLKCLSELSL 275
            E+  L  +  L L
Sbjct: 431 AEVGQLTNVKHLDL 444



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 58/164 (35%), Positives = 87/164 (53%), Gaps = 4/164 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LP ++  L  L+  +LS N L+  P ++  +  +K+L L +  L  +P E+ +L +L  
Sbjct: 14  TLPPEVGKLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLNLSHCQLRTLPPEVGRLTQLEW 73

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L  +P   G L  ++ L LS  QL +LP  +  L  L+ L L +N L+TLP E
Sbjct: 74  LDLSSNPLQTLPAEVGQLTNVKHLDLSHCQLHTLPLEVWKLTQLEWLDLSSNPLQTLPAE 133

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +  L      +K L L   +LRTLP+E+  L  L  L L  NPL
Sbjct: 134 VGQLT----NVKHLDLSQCQLRTLPSEVGRLTQLEWLDLSSNPL 173



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 73/236 (30%), Positives = 111/236 (47%), Gaps = 19/236 (8%)

Query: 17  DSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNK---------KPE-----NIDTLL 62
           + +K   ++ LD   + L  +TL T++  L N  Y            PE      ++ L 
Sbjct: 225 EVWKLTQLEWLDLRSNPL--QTLPTEVGHLTNVKYLNLSDCQLHILPPEVGRLTQLEKLD 282

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L  N L   P      TN++ LDLS+ ++  LP  +     L  L   +N L  ++LP +
Sbjct: 283 LCSNPLQTLPAEVGHCTNVKHLDLSHCQLRTLPFEVWKLTQLEWLSLSSNPL--QTLPAE 340

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L N+K  NLS  QL   P ++  +  L+ L L +N L  +P E+ +L  +  L L  
Sbjct: 341 VGQLTNVKQLNLSDCQLHTLPPEVGKLTQLERLDLSSNPLQTLPAEVGQLTNVKHLDLSQ 400

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
             L  +P   G L QLE L L  N L +LPA +  L  +K L L + +L TLP E+
Sbjct: 401 CLLHTLPPEVGRLTQLEWLDLRSNPLHALPAEVGQLTNVKHLDLSHCQLHTLPPEV 456



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 57/169 (33%), Positives = 89/169 (52%), Gaps = 9/169 (5%)

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           N+K  +LS  QL   P ++  +  L++L L +N L  +P E+ +L  +  L+L    L  
Sbjct: 1   NIKHLDLSDCQLHTLPPEVGKLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLNLSHCQLRT 60

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P   G L QLE L LS N L++LPA +  L  +K L L + +L TLP E+  L     +
Sbjct: 61  LPPEVGRLTQLEWLDLSSNPLQTLPAEVGQLTNVKHLDLSHCQLHTLPLEVWKLT----Q 116

Query: 247 LKSLLLHNNKLRTLPTEIITLKC-----LSELSLRDNPLVIRFVSDMTY 290
           L+ L L +N L+TLP E+  L       LS+  LR  P  +  ++ + +
Sbjct: 117 LEWLDLSSNPLQTLPAEVGQLTNVKHLDLSQCQLRTLPSEVGRLTQLEW 165



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 51/166 (30%), Positives = 79/166 (47%), Gaps = 5/166 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           N+  L L H  L   P    K T L  L LS+N +  LP  +      T + + NL   +
Sbjct: 300 NVKHLDLSHCQLRTLPFEVWKLTQLEWLSLSSNPLQTLPAEVGQL---TNVKQLNLSDCQ 356

Query: 117 --SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  L  L+  +LS N L+  P ++  +  +K+L L    L+ +P E+ +L +L
Sbjct: 357 LHTLPPEVGKLTQLERLDLSSNPLQTLPAEVGQLTNVKHLDLSQCLLHTLPPEVGRLTQL 416

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
             L L  N L  +P   G L  ++ L LS  QL +LP  +  L  L
Sbjct: 417 EWLDLRSNPLHALPAEVGQLTNVKHLDLSHCQLHTLPPEVGRLTQL 462


>gi|260788680|ref|XP_002589377.1| hypothetical protein BRAFLDRAFT_218230 [Branchiostoma floridae]
 gi|229274554|gb|EEN45388.1| hypothetical protein BRAFLDRAFT_218230 [Branchiostoma floridae]
          Length = 470

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 70/223 (31%), Positives = 118/223 (52%), Gaps = 7/223 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           ++D L + +N L+  P+   +   L  LD   N +T LPQAI +   ++ L   +N LT 
Sbjct: 37  DLDYLAVSNNKLTSIPEAIGRLQKLSRLDADGNMLTSLPQAIGSLQKMTDLYINDNQLT- 95

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P  + +L NL+V  +  N+L  FP  +  +  L+ LY+ +N L  VP  +  L  L 
Sbjct: 96  -EVPPGVCSLPNLEVLGVGNNKLSTFPPGVEKLQKLRELYINDNQLTEVPPGVCSLPNLE 154

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           VL +G N L+  P     L +L  L ++DNQL  +P+ + +L  L+ L + NN L T P 
Sbjct: 155 VLGVGNNKLSTFPPGVEKLQKLRELYINDNQLTEVPSGVCSLPNLEVLSVFNNNLSTFPL 214

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            +  L    +K++ L ++ N+L  +P+ + +L  L  LS+ +N
Sbjct: 215 GVEKL----QKVRELYIYGNQLTEVPSGVCSLPNLEVLSVFNN 253



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 67/220 (30%), Positives = 117/220 (53%), Gaps = 7/220 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L + +N LS FP    K   LR L +++N++T +P  + + P L  L   NN L+ 
Sbjct: 106 NLEVLGVGNNKLSTFPPGVEKLQKLRELYINDNQLTEVPPGVCSLPNLEVLGVGNNKLS- 164

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            + P  +  L+ L+   ++ NQL + P  +  +P L+ L + NN+L+  P  + KL K+ 
Sbjct: 165 -TFPPGVEKLQKLRELYINDNQLTEVPSGVCSLPNLEVLSVFNNNLSTFPLGVEKLQKVR 223

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L + GN LT++P     L  LE L + +N L + P  +  L+ ++ L ++ N+L  +P+
Sbjct: 224 ELYIYGNQLTEVPSGVCSLPNLEVLSVFNNNLSTFPLGVEKLQKVRKLYIYGNQLTEVPS 283

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            +    CL   L+ L +  N +R LP ++  L  L  LS+
Sbjct: 284 GV----CLLPNLEVLSVGMNPIRRLPNDVTRLARLKTLSV 319



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/223 (30%), Positives = 116/223 (52%), Gaps = 4/223 (1%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L + +N LS FP    K   LR L +++N++T +P  + + P L  L   NN L+ 
Sbjct: 152 NLEVLGVGNNKLSTFPPGVEKLQKLRELYINDNQLTEVPSGVCSLPNLEVLSVFNNNLS- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            + P  +  L+ ++   + GNQL + P  +  +P L+ L + NN+L+  P  + KL K+ 
Sbjct: 211 -TFPLGVEKLQKVRELYIYGNQLTEVPSGVCSLPNLEVLSVFNNNLSTFPLGVEKLQKVR 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L + GN LT++P     L  LE L +  N +  LP  ++ L  LK+L +   +    P 
Sbjct: 270 KLYIYGNQLTEVPSGVCLLPNLEVLSVGMNPIRRLPNDVTRLARLKTLSVPGCQFDEFPR 329

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           +++ LK L E+L +      K   +P E+  L+ L  LSL +N
Sbjct: 330 QVLHLKTL-EELYAGQNGGRKFDMVPDEVGNLQHLRLLSLENN 371



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 120/251 (47%), Gaps = 33/251 (13%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L +++NNLS FP    K   +R L +  N++T +P  + + P L  L   NN L+ 
Sbjct: 198 NLEVLSVFNNNLSTFPLGVEKLQKVRELYIYGNQLTEVPSGVCSLPNLEVLSVFNNNLS- 256

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            + P  +  L+ ++   + GNQL + P  +  +P L+ L +G N +  +P ++ +L +L 
Sbjct: 257 -TFPLGVEKLQKVRKLYIYGNQLTEVPSGVCLLPNLEVLSVGMNPIRRLPNDVTRLARLK 315

Query: 176 VLSL--------------------------GGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            LS+                          GG     +PD  G+L  L  L L +N L +
Sbjct: 316 TLSVPGCQFDEFPRQVLHLKTLEELYAGQNGGRKFDMVPDEVGNLQHLRLLSLENNFLRT 375

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           LP+++S+L  L+ + L NNK  T P  +  L  +++    L + NN +  L T +     
Sbjct: 376 LPSTMSHLHNLRVVQLPNNKFDTFPEVLCELPAMAK----LDIRNNNITRLLTALHRADK 431

Query: 270 LSELSLRDNPL 280
           L +L +  NPL
Sbjct: 432 LRDLDVSGNPL 442



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 104/229 (45%), Gaps = 31/229 (13%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNL 112
           +K + +  L +Y N L+  P       NL  L + NN        ++ FPL         
Sbjct: 217 EKLQKVRELYIYGNQLTEVPSGVCSLPNLEVLSVFNNN-------LSTFPLG-------- 261

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
                    +  L+ ++   + GNQL + P  +  +P L+ L +G N +  +P ++ +L 
Sbjct: 262 ---------VEKLQKVRKLYIYGNQLTEVPSGVCLLPNLEVLSVGMNPIRRLPNDVTRLA 312

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDN---QLESLPASISNLKMLKSLLLHNNK 229
           +L  LS+ G    + P     L  LE L    N   + + +P  + NL+ L+ L L NN 
Sbjct: 313 RLKTLSVPGCQFDEFPRQVLHLKTLEELYAGQNGGRKFDMVPDEVGNLQHLRLLSLENNF 372

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           LRTLP+ +  L      L+ + L NNK  T P  +  L  +++L +R+N
Sbjct: 373 LRTLPSTMSHL----HNLRVVQLPNNKFDTFPEVLCELPAMAKLDIRNN 417



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 38/157 (24%), Positives = 71/157 (45%), Gaps = 25/157 (15%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN---- 111
           N++ L +  N +   P++ ++   L++L +   +    P+ + +   L  L A  N    
Sbjct: 290 NLEVLSVGMNPIRRLPNDVTRLARLKTLSVPGCQFDEFPRQVLHLKTLEELYAGQNGGRK 349

Query: 112 ---------------LLTAE-----SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
                          LL+ E     +LP  MS+L NL+V  L  N+ + FP  + ++P +
Sbjct: 350 FDMVPDEVGNLQHLRLLSLENNFLRTLPSTMSHLHNLRVVQLPNNKFDTFPEVLCELPAM 409

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
             L + NN++  +   +++  KL  L + GN LT  P
Sbjct: 410 AKLDIRNNNITRLLTALHRADKLRDLDVSGNPLTYPP 446



 Score = 38.9 bits (89), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 41/187 (21%), Positives = 73/187 (39%), Gaps = 25/187 (13%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN------------ 100
           +K + +  L +Y N L+  P       NL  L +  N I  LP  +T             
Sbjct: 263 EKLQKVRKLYIYGNQLTEVPSGVCLLPNLEVLSVGMNPIRRLPNDVTRLARLKTLSVPGC 322

Query: 101 ----FPLSTL---------IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILD 147
               FP   L           +N     + +P ++ NL++L++ +L  N L   P  +  
Sbjct: 323 QFDEFPRQVLHLKTLEELYAGQNGGRKFDMVPDEVGNLQHLRLLSLENNFLRTLPSTMSH 382

Query: 148 IPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQL 207
           +  L+ + L NN  +  P  + +L  +  L +  N++T +        +L  L +S N L
Sbjct: 383 LHNLRVVQLPNNKFDTFPEVLCELPAMAKLDIRNNNITRLLTALHRADKLRDLDVSGNPL 442

Query: 208 ESLPASI 214
              P  +
Sbjct: 443 TYPPQDV 449


>gi|440789613|gb|ELR10919.1| SAM domain (Sterile alpha motif) domain containing protein
           [Acanthamoeba castellanii str. Neff]
          Length = 979

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/291 (31%), Positives = 137/291 (47%), Gaps = 40/291 (13%)

Query: 13  SSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFP 72
           + DS S     +++ D     L +         +P+N +  K  N+  L LY N +   P
Sbjct: 507 AEDSGSGSAGGLQSYDLRRKELTA---------VPSNVWEMK--NLSVLNLYMNKIESLP 555

Query: 73  DNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVF 131
            +  K T L++L L+ N +  LP  +     L+ L  R N LT   LP  + +L +L   
Sbjct: 556 PDLGKLTKLKALGLNENSLRTLPNELGQLTSLTMLDLRYNKLT--ELPATIKHLVHLNKL 613

Query: 132 NLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE----------------------IN 169
            L  N+LEQ P +I  + +L+ L + NN L+ +PR+                      + 
Sbjct: 614 FLRYNRLEQLPEEIGCLVSLEMLSVRNNQLHKLPRKLSMATNLKILDISTNHLTKFRSVE 673

Query: 170 KLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           KLC+L  L L  N LT +PD +G L  L  L +S N+LE  P +I+ L  L++L L  N+
Sbjct: 674 KLCQLKDLDLKQNKLTTLPDGWGALTDLMRLDVSQNKLEEFPVTITELPRLETLDLEANQ 733

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L  L  EI  +      L+SL L  NKL  LP E+  L  L EL L+ N L
Sbjct: 734 LTVLAPEIGNMTS----LRSLYLGRNKLIALPAELGMLTGLRELHLKGNRL 780



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 76/220 (34%), Positives = 107/220 (48%), Gaps = 7/220 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L  N L+  PD     T+L  LD+S N++   P  IT  P L TL    N LT   L  +
Sbjct: 683 LKQNKLTTLPDGWGALTDLMRLDVSQNKLEEFPVTITELPRLETLDLEANQLTV--LAPE 740

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           + N+ +L+   L  N+L   P ++  +  L+ L+L  N L  +P E++ L  L  L L  
Sbjct: 741 IGNMTSLRSLYLGRNKLIALPAELGMLTGLRELHLKGNRLKAIPPELSALVNLKHLDLST 800

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N     PD       L +L +SDNQ++ L   I  L  LK L L  N+L  LP EI  L 
Sbjct: 801 NEFQTFPDARCFPPALNSLNMSDNQMKRLSNQIGALTTLKQLNLDENQLDRLPGEISLLT 860

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L+E    L +  N+L TLP EI  +  + +L L  N +V
Sbjct: 861 GLTE----LRVGYNELLTLPHEIGDISLIKQLHLEHNKMV 896



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 113/224 (50%), Gaps = 6/224 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           +++ L + +N L   P   S  TNL+ LD+S N +T          L  L  + N LT  
Sbjct: 632 SLEMLSVRNNQLHKLPRKLSMATNLKILDISTNHLTKFRSVEKLCQLKDLDLKQNKLT-- 689

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LP     L +L   ++S N+LE+FP+ I ++P L+ L L  N L  +  EI  +  L  
Sbjct: 690 TLPDGWGALTDLMRLDVSQNKLEEFPVTITELPRLETLDLEANQLTVLAPEIGNMTSLRS 749

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L LG N L  +P   G L  L  L L  N+L+++P  +S L  LK L L  N+ +T P  
Sbjct: 750 LYLGRNKLIALPAELGMLTGLRELHLKGNRLKAIPPELSALVNLKHLDLSTNEFQTFP-- 807

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
               +C    L SL + +N+++ L  +I  L  L +L+L +N L
Sbjct: 808 --DARCFPPALNSLNMSDNQMKRLSNQIGALTTLKQLNLDENQL 849


>gi|384251955|gb|EIE25432.1| L domain-like protein [Coccomyxa subellipsoidea C-169]
          Length = 423

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 109/224 (48%), Gaps = 28/224 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           N + L+L  ++L+  P +    T L+ LDLS N++  LP AI                  
Sbjct: 3   NDNALVLSGHSLASIPASLCTLTFLQRLDLSRNKLKSLPDAI------------------ 44

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
                 S+L+ L   NL  NQL   P  +  + +L+YL L +NSL  +P E+  L  L+ 
Sbjct: 45  ------SSLQGLTDLNLGNNQLVSLPASVGSMKSLRYLNLMSNSLKALPEELGSLGVLYR 98

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L + GN L  +P T G L  L  L ++DN LE LPA I     L  +    N+L TLP E
Sbjct: 99  LGIKGNKLAALPHTIGGLTSLVELFITDNLLECLPAEIGRCTSLVKVQASFNRLATLPAE 158

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +  L    ++L+ L +  N L  +PTE+     L+ +SL  NP+
Sbjct: 159 LGNL----QRLELLRVAVNNLSEVPTELANCSALAWMSLAGNPI 198


>gi|260788688|ref|XP_002589381.1| hypothetical protein BRAFLDRAFT_77823 [Branchiostoma floridae]
 gi|229274558|gb|EEN45392.1| hypothetical protein BRAFLDRAFT_77823 [Branchiostoma floridae]
          Length = 1697

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/242 (31%), Positives = 118/242 (48%), Gaps = 22/242 (9%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L + +N LS FP    K   LR L +  N++T +P  + + P L  L   NN L+ 
Sbjct: 175 NLEVLSVSNNKLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLSVYNNNLS- 233

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            + P  +  L+ L+   + GNQL + P  +  +P +++L + NN+L+  P    KL KL 
Sbjct: 234 -TFPPGVEKLQKLRELRIYGNQLTEVPPGVCLLPNIEWLSVSNNNLSTFPPGGEKLQKLR 292

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L +  N LT++P     L  LE L +  N + SLP  ++ L  LK+L + N +L   P 
Sbjct: 293 ELYINDNQLTEVPSGVCSLPNLEVLGVGKNPIRSLPDYVTRLARLKTLSVPNCQLDEFPR 352

Query: 236 EIITLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           +++ LK L E                    L  L L  N L+TLP+ +  L  L E+ L 
Sbjct: 353 QVLQLKTLEELYAGGCKFDIVPDEVGSLQHLWYLALDKNLLKTLPSTMSHLHNLREVYLD 412

Query: 277 DN 278
           DN
Sbjct: 413 DN 414



 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/221 (32%), Positives = 109/221 (49%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L +Y N LS  P    K   L  L + NN++T  P  + + P L  L    N L   + P
Sbjct: 87  LYIYDNKLSTLPPGVEKLQKLTKLFIGNNQLTGFPSGVCSLPNLEVLEVSYNKLP--NFP 144

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             +  L+ L+   ++GNQL + P  +  +P L+ L + NN L+  P  + KL KL  L +
Sbjct: 145 PVVEKLQKLRTLYINGNQLTEVPPGVCLLPNLEVLSVSNNKLSTFPPGVEKLQKLRELYI 204

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
            GN LT++P     L  LE L + +N L + P  +  L+ L+ L ++ N+L  +P  +  
Sbjct: 205 YGNQLTEVPSGVCSLPNLEVLSVYNNNLSTFPPGVEKLQKLRELRIYGNQLTEVPPGV-- 262

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             CL   ++ L + NN L T P     L+ L EL + DN L
Sbjct: 263 --CLLPNIEWLSVSNNNLSTFPPGGEKLQKLRELYINDNQL 301



 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 136/285 (47%), Gaps = 23/285 (8%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           NI+ L + +NNLS FP    K   LR L +++N++T +P  + + P L  L    N +  
Sbjct: 267 NIEWLSVSNNNLSTFPPGGEKLQKLRELYINDNQLTEVPSGVCSLPNLEVLGVGKNPI-- 324

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLP  ++ L  LK  ++   QL++FP Q+L + TL+ LY G    + VP E+  L  L 
Sbjct: 325 RSLPDYVTRLARLKTLSVPNCQLDEFPRQVLQLKTLEELYAGGCKFDIVPDEVGSLQHLW 384

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L+L  N L  +P T   L+ L  + L DN+  + P  +  L  ++ L +  N +  LPT
Sbjct: 385 YLALDKNLLKTLPSTMSHLHNLREVYLDDNKFGTFPEVLCELPAMEKLDISKNNITRLPT 444

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI------ITLKCLSELSLRDNPLVIRF----- 284
            +      ++KLK L +  N L   P ++        +  L + + +D  ++  F     
Sbjct: 445 ALHR----ADKLKHLDVSGNPLTYPPQDVCKQGTGAIMAFLKQEAEKDERILRAFNRLSV 500

Query: 285 -VSDMTYKP-PSLLELASRTL---KVHEIDYSQEHLPQNLVQYLE 324
             S   +KP    L L++R +   K    D   + + Q LVQ+ E
Sbjct: 501 KASQTQWKPLARSLGLSNRAMDAIKASAPDDVPDQVYQTLVQWRE 545



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/225 (31%), Positives = 117/225 (52%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           +++ L + +N L+  P+   +   L  LD   N +T LPQAI +   L+ L   +N L+ 
Sbjct: 37  DLEFLDVSNNKLTSIPEAVGRLQKLYRLDADYNTLTSLPQAIGSLQKLTHLYIYDNKLS- 95

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LP  +  L+ L    +  NQL  FP  +  +P L+ L +  N L + P  + KL KL 
Sbjct: 96  -TLPPGVEKLQKLTKLFIGNNQLTGFPSGVCSLPNLEVLEVSYNKLPNFPPVVEKLQKLR 154

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L + GN LT++P     L  LE L +S+N+L + P  +  L+ L+ L ++ N+L  +P+
Sbjct: 155 TLYINGNQLTEVPPGVCLLPNLEVLSVSNNKLSTFPPGVEKLQKLRELYIYGNQLTEVPS 214

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            + +L      L+ L ++NN L T P  +  L+ L EL +  N L
Sbjct: 215 GVCSLP----NLEVLSVYNNNLSTFPPGVEKLQKLRELRIYGNQL 255



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 113/239 (47%), Gaps = 21/239 (8%)

Query: 57   NIDTLLLYHNNLSFFPDNASKFT--------------NLRSLDLSNNRITHLPQAITNF- 101
            N++ L +Y+N LS FP    K                NL  L + NN+++  P  +    
Sbjct: 1017 NLEVLNVYNNKLSTFPPGVEKLQKLGTLYINGVCLLPNLEVLSVGNNKLSTFPPGVEKLQ 1076

Query: 102  PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
             L  L  R+N LT   +P  + +L NL+V ++  N + + P  +  +  LK L + N   
Sbjct: 1077 KLRELYIRDNQLT--EVPSGVCSLPNLEVLSVGKNPIRRLPDYVTRLARLKTLSVSNCQF 1134

Query: 162  NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
               PR++ +L  +  L  GG     +PD  G L  L+ L L  N L++LP+++S+L  L+
Sbjct: 1135 AEFPRQVQQLKIMEELYAGGCKFDIVPDEVGSLQHLQVLALDKNLLKTLPSTMSHLHNLR 1194

Query: 222  SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             + L +NK  T P E++   C    ++ L +  N +  LPT +     L  L +  NPL
Sbjct: 1195 EVYLDDNKFGTFP-EVL---CELPAMEKLDISKNNITRLPTALHRADKLKHLDVSGNPL 1249



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 59/160 (36%), Positives = 84/160 (52%), Gaps = 10/160 (6%)

Query: 131  FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
             +LS   L   P ++ DI  L+ L + NN L  +P  I +L KL+ L   GN LT +P  
Sbjct: 929  LDLSNQGLTSIPEEVFDITDLEVLDVSNNKLTSIPEAIGRLQKLYRLDADGNMLTSLPQA 988

Query: 191  FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK--------- 241
             G L +L  L + DNQL  +P+ + +L  L+ L ++NNKL T P  +  L+         
Sbjct: 989  IGSLQKLIHLYIYDNQLTEVPSGVCSLPNLEVLNVYNNKLSTFPPGVEKLQKLGTLYING 1048

Query: 242  -CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             CL   L+ L + NNKL T P  +  L+ L EL +RDN L
Sbjct: 1049 VCLLPNLEVLSVGNNKLSTFPPGVEKLQKLRELYIRDNQL 1088



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 111/248 (44%), Gaps = 30/248 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSL-----------------------DLSNNRITH 93
           N++ L +Y+NNLS FP    K   LR L                        +SNN ++ 
Sbjct: 221 NLEVLSVYNNNLSTFPPGVEKLQKLRELRIYGNQLTEVPPGVCLLPNIEWLSVSNNNLST 280

Query: 94  LPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
            P        L  L   +N LT   +P  + +L NL+V  +  N +   P  +  +  LK
Sbjct: 281 FPPGGEKLQKLRELYINDNQLT--EVPSGVCSLPNLEVLGVGKNPIRSLPDYVTRLARLK 338

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            L + N  L+  PR++ +L  L  L  GG     +PD  G L  L  L L  N L++LP+
Sbjct: 339 TLSVPNCQLDEFPRQVLQLKTLEELYAGGCKFDIVPDEVGSLQHLWYLALDKNLLKTLPS 398

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSE 272
           ++S+L  L+ + L +NK  T P E++   C    ++ L +  N +  LPT +     L  
Sbjct: 399 TMSHLHNLREVYLDDNKFGTFP-EVL---CELPAMEKLDISKNNITRLPTALHRADKLKH 454

Query: 273 LSLRDNPL 280
           L +  NPL
Sbjct: 455 LDVSGNPL 462



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 68/156 (43%), Gaps = 26/156 (16%)

Query: 57   NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-------------- 102
            N++ L +  N +   PD  ++   L++L +SN +    P+ +                  
Sbjct: 1100 NLEVLSVGKNPIRRLPDYVTRLARLKTLSVSNCQFAEFPRQVQQLKIMEELYAGGCKFDI 1159

Query: 103  ----------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                      L  L    NLL  ++LP  MS+L NL+   L  N+   FP  + ++P ++
Sbjct: 1160 VPDEVGSLQHLQVLALDKNLL--KTLPSTMSHLHNLREVYLDDNKFGTFPEVLCELPAME 1217

Query: 153  YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
             L +  N++  +P  +++  KL  L + GN LT  P
Sbjct: 1218 KLDISKNNITRLPTALHRADKLKHLDVSGNPLTYPP 1253


>gi|405965234|gb|EKC30629.1| hypothetical protein CGI_10009166 [Crassostrea gigas]
          Length = 575

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/258 (32%), Positives = 124/258 (48%), Gaps = 25/258 (9%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+  L ++ N+L + P   S    L  L+L++N+  HLP  + +   L  L  R N L  
Sbjct: 174 NLKYLDVHGNHLWYLPFALSLLGKLHYLNLADNKFEHLPLPVCHITSLKALQLRGNGLA- 232

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LP D  +LK L+  NLS N+L+  P  I ++P LKYL L  N + HV        KL 
Sbjct: 233 -NLPPDFDSLKQLREVNLSFNKLQMIPSSITNLPELKYLNLAGNKIRHVSHHFASFAKLR 291

Query: 176 VLSLGGNSLTDIPDTF------------------GDLYQLEALILSDNQLESLPASISNL 217
           VL L GN +    + F                  G + +L+ L  S NQL+++PA + + 
Sbjct: 292 VLHLQGNEIEHFAEGFVHMRYLNVSENRLYTLTVGRMKKLQHLNASFNQLDNIPAGLLSC 351

Query: 218 KMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRD 277
             L+ L L+ NK++ +P EII L    +KL+ L L NN+L   P  I  +  L   ++R 
Sbjct: 352 PKLEELKLNGNKIQVIPHEIIQL----QKLRVLDLGNNELTCFPQVIDKMVKLDYFNVRG 407

Query: 278 NPLVIRFVSDMTYKPPSL 295
           N +  R  S     P S 
Sbjct: 408 NFIKQREGSPKQVWPQSF 425



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/254 (33%), Positives = 130/254 (51%), Gaps = 12/254 (4%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L H +L  FP +   FT L+ LDLS+N I  +P AI     L  L   +N ++   LP
Sbjct: 63  LKLCHYHLIEFPKDVLNFTGLQHLDLSHNVIQEIPGAIGRMRRLKVLHLHDNKIS--RLP 120

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
           + +SN  +L+  NL+ N+L   P  I  + +L+   LG N    +P +I+ L  L  L +
Sbjct: 121 ETLSNCIHLEDINLTKNELSSLPQNIGALKSLQTFRLGENRFESLPHDISLLGNLKYLDV 180

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
            GN L  +P     L +L  L L+DN+ E LP  + ++  LK+L L  N L  LP +  +
Sbjct: 181 HGNHLWYLPFALSLLGKLHYLNLADNKFEHLPLPVCHITSLKALQLRGNGLANLPPDFDS 240

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELA 299
           LK    +L+ + L  NKL+ +P+ I  L  L  L+L  N   IR VS   +   S  +L 
Sbjct: 241 LK----QLREVNLSFNKLQMIPSSITNLPELKYLNLAGNK--IRHVS---HHFASFAKLR 291

Query: 300 SRTLKVHEIDYSQE 313
              L+ +EI++  E
Sbjct: 292 VLHLQGNEIEHFAE 305



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 70/215 (32%), Positives = 107/215 (49%), Gaps = 7/215 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           +  L L+ N +S  P+  S   +L  ++L+ N ++ LPQ I     L T     N    E
Sbjct: 106 LKVLHLHDNKISRLPETLSNCIHLEDINLTKNELSSLPQNIGALKSLQTFRLGENRF--E 163

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           SLP D+S L NLK  ++ GN L   P  +  +  L YL L +N   H+P  +  +  L  
Sbjct: 164 SLPHDISLLGNLKYLDVHGNHLWYLPFALSLLGKLHYLNLADNKFEHLPLPVCHITSLKA 223

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L GN L ++P  F  L QL  + LS N+L+ +P+SI+NL  LK L L  NK+R +   
Sbjct: 224 LQLRGNGLANLPPDFDSLKQLREVNLSFNKLQMIPSSITNLPELKYLNLAGNKIRHVSHH 283

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             +      KL+ L L  N++       + ++ L+
Sbjct: 284 FASF----AKLRVLHLQGNEIEHFAEGFVHMRYLN 314



 Score = 75.5 bits (184), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/171 (33%), Positives = 88/171 (51%), Gaps = 7/171 (4%)

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE 167
           AR+   T   + K+   L  LK   L    L +FP  +L+   L++L L +N +  +P  
Sbjct: 43  ARSQQPTRYPVAKNQKGLLELK---LCHYHLIEFPKDVLNFTGLQHLDLSHNVIQEIPGA 99

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           I ++ +L VL L  N ++ +P+T  +   LE + L+ N+L SLP +I  LK L++  L  
Sbjct: 100 IGRMRRLKVLHLHDNKISRLPETLSNCIHLEDINLTKNELSSLPQNIGALKSLQTFRLGE 159

Query: 228 NKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           N+  +LP +I     L   LK L +H N L  LP  +  L  L  L+L DN
Sbjct: 160 NRFESLPHDI----SLLGNLKYLDVHGNHLWYLPFALSLLGKLHYLNLADN 206



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 71/272 (26%), Positives = 114/272 (41%), Gaps = 27/272 (9%)

Query: 6   GSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYH 65
           G+  ++   D DS K   ++ ++ S++ L  + + + I  LP   Y         L L  
Sbjct: 228 GNGLANLPPDFDSLK--QLREVNLSFNKL--QMIPSSITNLPELKY---------LNLAG 274

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNL 125
           N +     + + F  LR L L  N I H  +   +      ++ N L T       +  +
Sbjct: 275 NKIRHVSHHFASFAKLRVLHLQGNEIEHFAEGFVHMRYLN-VSENRLYTL-----TVGRM 328

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           K L+  N S NQL+  P  +L  P L+ L L  N +  +P EI +L KL VL LG N LT
Sbjct: 329 KKLQHLNASFNQLDNIPAGLLSCPKLEELKLNGNKIQVIPHEIIQLQKLRVLDLGNNELT 388

Query: 186 DIPDTFGDLYQLEALILSDN---QLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
             P     + +L+   +  N   Q E  P  +      +S  +   K +  P  + T   
Sbjct: 389 CFPQVIDKMVKLDYFNVRGNFIKQREGSPKQV----WPQSFSVMVKKDKPSPRSVKTPIH 444

Query: 243 LSEK-LKSLLLHNNKLRTLPTEIITLKCLSEL 273
           +++K  K++  HN   R  P      + L EL
Sbjct: 445 VNQKPKKAMSGHNQSARKKPRYTTQSQHLDEL 476


>gi|111307791|gb|AAI21268.1| LOC734027 protein [Xenopus (Silurana) tropicalis]
          Length = 635

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 112/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTY--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + NLK L   ++S N +E     I    +L+ L L +N++  +P  I  L KL  L +
Sbjct: 224 GFLGNLKQLTYLDVSKNNIEMVEDGISGCESLQDLLLSSNAIQQLPESIGALKKLTTLKV 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI +L  +++    +N L  LP EI T
Sbjct: 284 DENQLMYLPDSIGGLTAIEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPPEIGT 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K  +     L LH+NKL +LP E+  ++ L  ++L DN L
Sbjct: 344 WKSAT----VLFLHSNKLESLPEEMGDMQKLKVINLSDNRL 380



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 133/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLD---------SETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ +LD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTSLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFN--CQSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTILPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    + LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLDFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    + GN LT IP   G+L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDGNKLTYIPGFLGNLKQLTYLDVSKNNIEMVEDGISGCESLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N ++ LP  I  LK    KL +L +  N+L  LP  I  L  + +L
Sbjct: 261 SSNAIQQLPESIGALK----KLTTLKVDENQLMYLPDSIGGLTAIEDL 304



 Score = 72.4 bits (176), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 15/229 (6%)

Query: 41  TQIELL--PNNDYNKKPENIDTL------LLYHNNLSFFPDNASKFTNLRSLDLSNNRIT 92
           TQ+E L   +N++ + PE ++ L       +  N L++ P        L  LD+S N I 
Sbjct: 184 TQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTYIPGFLGNLKQLTYLDVSKNNIE 243

Query: 93  HLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
            +   I+    L  L+  +N +  + LP+ +  LK L    +  NQL   P  I  +  +
Sbjct: 244 MVEDGISGCESLQDLLLSSNAI--QQLPESIGALKKLTTLKVDENQLMYLPDSIGGLTAI 301

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           + L    N +  +P  I  L ++   +   N LT +P   G       L L  N+LESLP
Sbjct: 302 EDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPPEIGTWKSATVLFLHSNKLESLP 361

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
             + +++ LK + L +N+LR LP     L    ++L ++ L +N+ + L
Sbjct: 362 EEMGDMQKLKVINLSDNRLRNLPFSFTRL----QQLTAMWLSDNQSKPL 406


>gi|271966020|ref|YP_003340216.1| hypothetical protein [Streptosporangium roseum DSM 43021]
 gi|270509195|gb|ACZ87473.1| conserved hypothetical protein [Streptosporangium roseum DSM 43021]
          Length = 416

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 93/173 (53%), Gaps = 3/173 (1%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           LY N L+  P+     T+L  LDLS+NR+T LP  + N   L+ L    N LTA  LP+ 
Sbjct: 222 LYGNQLTALPETLGNLTDLTELDLSSNRLTTLPDTLGNLASLTMLSLYGNQLTA--LPET 279

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           + NL NL   +LS N+L   P  + ++  L      +N L  VP  +  +  L +L L G
Sbjct: 280 LGNLTNLTELDLSSNRLTTLPEVLGNLTDLTTFIAHDNLLTAVPEWLGDITDLTLLGLSG 339

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
           N LT +PDT G+L  L  L L  NQL +LP ++ NL  L  L L NN+L  LP
Sbjct: 340 NRLTTLPDTLGNLTSLTMLSLYGNQLTALPETLGNLTDLTDLELWNNRLTALP 392



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 110/217 (50%), Gaps = 7/217 (3%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
            N L+  PD      +L  L L  N++T LP+ + N   L+ L   +N LT  +LP  + 
Sbjct: 201 GNRLTTLPDTLGNLASLTKLSLYGNQLTALPETLGNLTDLTELDLSSNRLT--TLPDTLG 258

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           NL +L + +L GNQL   P  + ++  L  L L +N L  +P  +  L  L       N 
Sbjct: 259 NLASLTMLSLYGNQLTALPETLGNLTNLTELDLSSNRLTTLPEVLGNLTDLTTFIAHDNL 318

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT +P+  GD+  L  L LS N+L +LP ++ NL  L  L L+ N+L  LP  +  L  L
Sbjct: 319 LTAVPEWLGDITDLTLLGLSGNRLTTLPDTLGNLTSLTMLSLYGNQLTALPETLGNLTDL 378

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           ++    L L NN+L  LP  +  L  L+ ++L  NP+
Sbjct: 379 TD----LELWNNRLTALPESLGDLPDLTWINLSGNPI 411



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 56/148 (37%), Positives = 85/148 (57%), Gaps = 3/148 (2%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           LY N L+  P+     TNL  LDLS+NR+T LP+ + N   L+T IA +NLLTA  +P+ 
Sbjct: 268 LYGNQLTALPETLGNLTNLTELDLSSNRLTTLPEVLGNLTDLTTFIAHDNLLTA--VPEW 325

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           + ++ +L +  LSGN+L   P  + ++ +L  L L  N L  +P  +  L  L  L L  
Sbjct: 326 LGDITDLTLLGLSGNRLTTLPDTLGNLTSLTMLSLYGNQLTALPETLGNLTDLTDLELWN 385

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLES 209
           N LT +P++ GDL  L  + LS N +++
Sbjct: 386 NRLTALPESLGDLPDLTWINLSGNPIDA 413



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 86/279 (30%), Positives = 119/279 (42%), Gaps = 58/279 (20%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNL----- 112
           ++ L L  N LS  PD+      L  L+LS N ++ LP  + N    T + R NL     
Sbjct: 91  LEVLDLRENGLSQAPDSLGNLIALTELNLSENYLSALPDTLKNL---TALTRLNLSSLGM 147

Query: 113 --------LTAESLPKDMSNLKNLKVFNLS-----------------------GNQLEQF 141
                   L   +LP+ + NL +L   +LS                       GN+L   
Sbjct: 148 LAPEFFPTLGLTTLPEWLGNLTDLTELDLSSNRLTALPEVLGNLTDLTLLNLSGNRLTTL 207

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P  + ++ +L  L L  N L  +P  +  L  L  L L  N LT +PDT G+L  L  L 
Sbjct: 208 PDTLGNLASLTKLSLYGNQLTALPETLGNLTDLTELDLSSNRLTTLPDTLGNLASLTMLS 267

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLP------TEIIT-------LKCLSEKLK 248
           L  NQL +LP ++ NL  L  L L +N+L TLP      T++ T       L  + E L 
Sbjct: 268 LYGNQLTALPETLGNLTNLTELDLSSNRLTTLPEVLGNLTDLTTFIAHDNLLTAVPEWLG 327

Query: 249 S------LLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                  L L  N+L TLP  +  L  L+ LSL  N L 
Sbjct: 328 DITDLTLLGLSGNRLTTLPDTLGNLTSLTMLSLYGNQLT 366



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 63/194 (32%), Positives = 88/194 (45%), Gaps = 30/194 (15%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           +P+ +S+L +L   +LS N L   P  + D+P L  L L  N L  V   +  L  L VL
Sbjct: 35  IPESLSDLTHLARLDLSENNLSDIPSSLRDLPALTELNLRANFLETVSDTLGDLVTLEVL 94

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN---------- 227
            L  N L+  PD+ G+L  L  L LS+N L +LP ++ NL  L  L L +          
Sbjct: 95  DLRENGLSQAPDSLGNLIALTELNLSENYLSALPDTLKNLTALTRLNLSSLGMLAPEFFP 154

Query: 228 -NKLRTLP------TEIITLKCLSEKLKSL-------------LLHNNKLRTLPTEIITL 267
              L TLP      T++  L   S +L +L              L  N+L TLP  +  L
Sbjct: 155 TLGLTTLPEWLGNLTDLTELDLSSNRLTALPEVLGNLTDLTLLNLSGNRLTTLPDTLGNL 214

Query: 268 KCLSELSLRDNPLV 281
             L++LSL  N L 
Sbjct: 215 ASLTKLSLYGNQLT 228



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 73/159 (45%), Gaps = 7/159 (4%)

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
             +LS   L + P  + D+  L  L L  N+L+ +P  +  L  L  L+L  N L  + D
Sbjct: 24  TLDLSSLGLSEIPESLSDLTHLARLDLSENNLSDIPSSLRDLPALTELNLRANFLETVSD 83

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE-KLK 248
           T GDL  LE L L +N L   P S+ NL  L  L L  N L  LP  +  L  L+   L 
Sbjct: 84  TLGDLVTLEVLDLRENGLSQAPDSLGNLIALTELNLSENYLSALPDTLKNLTALTRLNLS 143

Query: 249 SLLLHNNK------LRTLPTEIITLKCLSELSLRDNPLV 281
           SL +   +      L TLP  +  L  L+EL L  N L 
Sbjct: 144 SLGMLAPEFFPTLGLTTLPEWLGNLTDLTELDLSSNRLT 182


>gi|307204876|gb|EFN83431.1| Protein flightless-1 [Harpegnathos saltator]
          Length = 1256

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 81/257 (31%), Positives = 128/257 (49%), Gaps = 17/257 (6%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITH--LPQAITNFPLSTLIARNNLLTAESLPK 120
           L HN L   P    +  NL++L+L++N + H  L Q  +   L+TL  R+   T  ++P 
Sbjct: 173 LSHNKLETVPPQTRRLANLQTLNLNHNPLGHFQLRQLPSLMSLTTLQMRDTQRTLNNIPS 232

Query: 121 DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
            +  L NL+  +LS N L + P  +  +  L+ L L NN +  +   I    KL  L++ 
Sbjct: 233 SLETLTNLQELDLSQNNLPRVPDALYSLSNLRRLNLSNNQITELSIAIEMWTKLETLNVS 292

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQL--ESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
            N L+ IP +   +  L  L L+DN+L  E +P+ I  L  L+     NN+L  +P  + 
Sbjct: 293 RNKLSAIPASLCKISTLRRLYLNDNELDFEGIPSGIGKLSSLQVFSAANNQLEMIPEGL- 351

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLEL 298
              C    LK L+L +N+L T+P  I  L  L +L LRDNP ++         PP  LE 
Sbjct: 352 ---CRCGALKQLILTSNRLITVPDAIHLLTDLEQLDLRDNPNLVM--------PPKPLEA 400

Query: 299 ASRT-LKVHEIDYSQEH 314
              + ++ + ID+S +H
Sbjct: 401 QRGSGIEFYNIDFSLQH 417



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 65/234 (27%), Positives = 99/234 (42%), Gaps = 54/234 (23%)

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL-- 184
           +++ FN  G    +FP  +  +  +++L L   +L  +P E+ KL KL  LSL  N L  
Sbjct: 30  SIRGFNEDG----KFPESVRLMTGIQWLKLDKTNLAEIPEEMGKLLKLEHLSLVKNKLER 85

Query: 185 -----------------------TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
                                  + IP     L +L  L LS N L+ +P  +   + L 
Sbjct: 86  LYGELTELGCLRTLNIRHNNIKSSGIPAELFHLEELTTLDLSHNNLKEVPEGLERARSLL 145

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +L L +N + T+P    TL      L  L L +NKL T+P +   L  L  L+L  NPL 
Sbjct: 146 NLNLSHNHIETIPN---TLFIHLTDLLFLDLSHNKLETVPPQTRRLANLQTLNLNHNPLG 202

Query: 282 IRFVSDMTYKPPSLLELAS-------RTL-----------KVHEIDYSQEHLPQ 317
              +  +    PSL+ L +       RTL            + E+D SQ +LP+
Sbjct: 203 HFQLRQL----PSLMSLTTLQMRDTQRTLNNIPSSLETLTNLQELDLSQNNLPR 252


>gi|421088219|ref|ZP_15549047.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
           200802841]
 gi|410003204|gb|EKO53650.1| leucine rich repeat protein, partial [Leptospira kirschneri str.
           200802841]
          Length = 305

 Score =  103 bits (258), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/250 (37%), Positives = 125/250 (50%), Gaps = 27/250 (10%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L L    L+  P    +  NL +L+L NN+ T LP  I     L  L    NLL
Sbjct: 18  PLDVRVLNLGKQKLTILPKEIGQLKNLLTLNLWNNQFTTLPNEIGQLQSLQELYLGKNLL 77

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  ++PK++  LKNL++ NL  NQL   P +I  +  L+ LYL  N L  +P+EI +L  
Sbjct: 78  T--TVPKEIGQLKNLQMLNLEANQLTTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQN 135

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L+ L+L  N LT +P+  G L  L  L L+ NQ   LP  I  LK L+ L LH+N+   L
Sbjct: 136 LYELNLYENKLTTLPNEIGQLKNLRVLELTHNQFTILPEGIGKLKNLQELHLHDNQFTIL 195

Query: 234 PTEIITLKCLSEKLKSLLLHN----------------------NKLRTLPTEIITLKCLS 271
           P EI  LK L  K+ SL  +N                      N+L TLP EI  LK L 
Sbjct: 196 PKEIGKLKNL--KMLSLGYYNQLKTIPVEIGQLQNLQQLNLDANQLTTLPKEIGQLKNLK 253

Query: 272 ELSLRDNPLV 281
           +LSL  N L 
Sbjct: 254 KLSLDANQLT 263



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 74/165 (44%), Positives = 93/165 (56%), Gaps = 4/165 (2%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LPK++  LKNL   NL  NQ    P +I  + +L+ LYLG N L  VP+EI +L  L +L
Sbjct: 34  LPKEIGQLKNLLTLNLWNNQFTTLPNEIGQLQSLQELYLGKNLLTTVPKEIGQLKNLQML 93

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
           +L  N LT +P   G L  L+ L LS NQL++LP  I  L+ L  L L+ NKL TLP EI
Sbjct: 94  NLEANQLTTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLYELNLYENKLTTLPNEI 153

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
             LK     L+ L L +N+   LP  I  LK L EL L DN   I
Sbjct: 154 GQLK----NLRVLELTHNQFTILPEGIGKLKNLQELHLHDNQFTI 194



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 77/192 (40%), Positives = 101/192 (52%), Gaps = 4/192 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +  NL+ L LS N++  LP+ I     L  L    N LT
Sbjct: 88  KNLQMLNLEANQLTTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLYELNLYENKLT 147

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  LKNL+V  L+ NQ    P  I  +  L+ L+L +N    +P+EI KL  L
Sbjct: 148 --TLPNEIGQLKNLRVLELTHNQFTILPEGIGKLKNLQELHLHDNQFTILPKEIGKLKNL 205

Query: 175 HVLSLGG-NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
            +LSLG  N L  IP   G L  L+ L L  NQL +LP  I  LK LK L L  N+L TL
Sbjct: 206 KMLSLGYYNQLKTIPVEIGQLQNLQQLNLDANQLTTLPKEIGQLKNLKKLSLDANQLTTL 265

Query: 234 PTEIITLKCLSE 245
           P EI  L+ L E
Sbjct: 266 PNEIGQLQNLQE 277



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/156 (39%), Positives = 88/156 (56%), Gaps = 4/156 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L+  P+   +  NLR L+L++N+ T LP+ I     L  L   +N  T
Sbjct: 134 QNLYELNLYENKLTTLPNEIGQLKNLRVLELTHNQFTILPEGIGKLKNLQELHLHDNQFT 193

Query: 115 AESLPKDMSNLKNLKVFNLSG-NQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
              LPK++  LKNLK+ +L   NQL+  P++I  +  L+ L L  N L  +P+EI +L  
Sbjct: 194 I--LPKEIGKLKNLKMLSLGYYNQLKTIPVEIGQLQNLQQLNLDANQLTTLPKEIGQLKN 251

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
           L  LSL  N LT +P+  G L  L+ L L DNQL S
Sbjct: 252 LKKLSLDANQLTTLPNEIGQLQNLQELYLIDNQLSS 287



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 69/169 (40%), Positives = 88/169 (52%), Gaps = 4/169 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T + L K + N  +++V NL   +L   P +I  +  L  L L NN    +P EI +L  
Sbjct: 7   TYKDLTKAIQNPLDVRVLNLGKQKLTILPKEIGQLKNLLTLNLWNNQFTTLPNEIGQLQS 66

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L LG N LT +P   G L  L+ L L  NQL +LP  I  L+ L+ L L  N+L+TL
Sbjct: 67  LQELYLGKNLLTTVPKEIGQLKNLQMLNLEANQLTTLPKEIGRLQNLQELYLSYNQLKTL 126

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  L+ L E    L L+ NKL TLP EI  LK L  L L  N   I
Sbjct: 127 PKEIGQLQNLYE----LNLYENKLTTLPNEIGQLKNLRVLELTHNQFTI 171


>gi|45361617|ref|NP_989386.1| leucine rich repeat containing 1 [Xenopus (Silurana) tropicalis]
 gi|40675662|gb|AAH64859.1| hypothetical protein MGC75617 [Xenopus (Silurana) tropicalis]
          Length = 524

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 121/223 (54%), Gaps = 9/223 (4%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-F 101
           +++LP N  N    N+ +L L  N L+F P++ ++   L  LD+ NN + +LP+ I + +
Sbjct: 140 LQVLPENIGNLS--NLVSLELRENLLTFLPESLAQLHRLEELDIGNNELYNLPETIGSLY 197

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L  L    N L    LP ++ +LKNL   +LS N+LE+ P +I  + +L  L + +NS+
Sbjct: 198 KLKDLWLDGNQLA--DLPPEIGHLKNLLCLDLSENKLERLPEEISGLKSLTDLLVSHNSI 255

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +P  I KL  L +L +  N L  + D  G+   L  LIL++NQL  LP SI  LK L 
Sbjct: 256 EVLPDGIGKLKNLSILKVDQNRLMQLTDCIGECESLTELILTENQLLVLPRSIGKLKKLC 315

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           +L +  NKL +LP EI    C    L    +  N+L  +P+EI
Sbjct: 316 NLNIDRNKLMSLPKEIGG--CCG--LNVFCVRENRLSRIPSEI 354



 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 84/228 (36%), Positives = 120/228 (52%), Gaps = 9/228 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P    +   LR L LS+N I  LP  I NF  L  L ++RN +  
Sbjct: 37  SLEELLLDANQLRELPKQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEI-- 94

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+ +S  K L+V + SGN L + P    D+ +L  L + + SL  +P  I  L  L
Sbjct: 95  -PEIPESISFCKALQVADFSGNPLTRLPDSFPDLASLTCLSINDISLQVLPENIGNLSNL 153

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P++   L++LE L + +N+L +LP +I +L  LK L L  N+L  LP
Sbjct: 154 VSLELRENLLTFLPESLAQLHRLEELDIGNNELYNLPETIGSLYKLKDLWLDGNQLADLP 213

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            EI  LK     L  L L  NKL  LP EI  LK L++L +  N + +
Sbjct: 214 PEIGHLK----NLLCLDLSENKLERLPEEISGLKSLTDLLVSHNSIEV 257



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 123/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N +   P++ S    L+  D S N +T LP +  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPDSFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
           +    T ++ N++ + + LP+++ NL NL    L  N L   P  +  +  L+ L +GNN
Sbjct: 126 DLASLTCLSINDI-SLQVLPENIGNLSNLVSLELRENLLTFLPESLAQLHRLEELDIGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L ++P  I  L KL  L L GN L D+P   G L  L  L LS+N+LE LP  IS LK 
Sbjct: 185 ELYNLPETIGSLYKLKDLWLDGNQLADLPPEIGHLKNLLCLDLSENKLERLPEEISGLKS 244

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTL 260
           L  LL+ +N +  LP  I  LK LS                   E L  L+L  N+L  L
Sbjct: 245 LTDLLVSHNSIEVLPDGIGKLKNLSILKVDQNRLMQLTDCIGECESLTELILTENQLLVL 304

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK L  L++  N L+
Sbjct: 305 PRSIGKLKKLCNLNIDRNKLM 325



 Score = 39.7 bits (91), Expect = 2.9,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 30/55 (54%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNN 111
            ++   +  N LS  P   +K T L  LD++ NR+THLP ++T+  L  L   +N
Sbjct: 336 GLNVFCVRENRLSRIPSEIAKATELHVLDVAGNRLTHLPLSLTSLKLKALWLSDN 390


>gi|421087864|ref|ZP_15548699.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
 gi|421102567|ref|ZP_15563171.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410367681|gb|EKP23065.1| leucine rich repeat protein [Leptospira interrogans serovar
           Icterohaemorrhagiae str. Verdun LP]
 gi|410429605|gb|EKP73981.1| leucine rich repeat protein [Leptospira santarosai str. HAI1594]
          Length = 242

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/164 (40%), Positives = 99/164 (60%), Gaps = 4/164 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LPK +  LKNL++ +L  NQ +  P +I  +  L+ L L  N    VP++I +L  L V
Sbjct: 64  TLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQV 123

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+L  N LT +P   G    L+ L L  N+L++LP  I  LK L++L L+ N+L TLP E
Sbjct: 124 LNLSSNQLTTLPKEIGKPENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPRE 183

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L+ L+E    L L +N++ TLP EII L+ L +L+L +NP+
Sbjct: 184 IGRLQSLTE----LHLQHNQIATLPDEIIQLQNLRKLTLYENPI 223



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 64/199 (32%), Positives = 98/199 (49%), Gaps = 28/199 (14%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           ++  L+L    L+  P    +  NL+ LDL  N+                         +
Sbjct: 51  DVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQF------------------------K 86

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           ++PK++  LKNL++ +L  NQ +  P +I  +  L+ L L +N L  +P+EI K   L V
Sbjct: 87  TVPKEIEQLKNLQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKPENLQV 146

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+LG N L  +P     L  L+ L L+ NQL +LP  I  L+ L  L L +N++ TLP E
Sbjct: 147 LNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLTTLPREIGRLQSLTELHLQHNQIATLPDE 206

Query: 237 IITLKCLSEKLKSLLLHNN 255
           II L    + L+ L L+ N
Sbjct: 207 IIQL----QNLRKLTLYEN 221



 Score = 80.9 bits (198), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 89/165 (53%), Gaps = 4/165 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L + + N  ++++  LS  +L   P +I  +  L+ L L  N    VP+EI +L  
Sbjct: 38  TYRDLTEALQNSLDVRILILSEQKLTTLPKKIEQLKNLQMLDLCYNQFKTVPKEIEQLKN 97

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N    +P   G L  L+ L LS NQL +LP  I   + L+ L L +N+L+TL
Sbjct: 98  LQMLDLCYNQFKTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKPENLQVLNLGSNRLKTL 157

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P  I  LK     L++L L+ N+L TLP EI  L+ L+EL L+ N
Sbjct: 158 PKGIEQLK----NLQTLYLNYNQLTTLPREIGRLQSLTELHLQHN 198



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/173 (32%), Positives = 80/173 (46%), Gaps = 24/173 (13%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           +N+  L L +N     P    +  NL+ LDL  N+                         
Sbjct: 73  KNLQMLDLCYNQFKTVPKEIEQLKNLQMLDLCYNQF------------------------ 108

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           +++PK +  LKNL+V NLS NQL   P +I     L+ L LG+N L  +P+ I +L  L 
Sbjct: 109 KTVPKKIGQLKNLQVLNLSSNQLTTLPKEIGKPENLQVLNLGSNRLKTLPKGIEQLKNLQ 168

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
            L L  N LT +P   G L  L  L L  NQ+ +LP  I  L+ L+ L L+ N
Sbjct: 169 TLYLNYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYEN 221



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 53/183 (28%), Positives = 83/183 (45%), Gaps = 35/183 (19%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           +++ LD  Y+    +T+  +IE L         +N+  L L +N     P    +  NL+
Sbjct: 74  NLQMLDLCYNQF--KTVPKEIEQL---------KNLQMLDLCYNQFKTVPKKIGQLKNLQ 122

Query: 83  SLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
            L+LS+N++T                        +LPK++   +NL+V NL  N+L+  P
Sbjct: 123 VLNLSSNQLT------------------------TLPKEIGKPENLQVLNLGSNRLKTLP 158

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
             I  +  L+ LYL  N L  +PREI +L  L  L L  N +  +PD    L  L  L L
Sbjct: 159 KGIEQLKNLQTLYLNYNQLTTLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTL 218

Query: 203 SDN 205
            +N
Sbjct: 219 YEN 221



 Score = 41.2 bits (95), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 57/121 (47%), Gaps = 26/121 (21%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLL 113
           KPEN+  L L  N L   P    +  NL++L L+ N++T                     
Sbjct: 140 KPENLQVLNLGSNRLKTLPKGIEQLKNLQTLYLNYNQLT--------------------- 178

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
              +LP+++  L++L   +L  NQ+   P +I+ +  L+ L L  N +   P+E++K+ K
Sbjct: 179 ---TLPREIGRLQSLTELHLQHNQIATLPDEIIQLQNLRKLTLYENPIP--PQELDKIRK 233

Query: 174 L 174
           L
Sbjct: 234 L 234


>gi|451339263|ref|ZP_21909782.1| small GTP-binding protein [Amycolatopsis azurea DSM 43854]
 gi|449417985|gb|EMD23603.1| small GTP-binding protein [Amycolatopsis azurea DSM 43854]
          Length = 238

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 77/204 (37%), Positives = 115/204 (56%), Gaps = 8/204 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P +++ L LY N L+  PD+    T LR L+L+ NR+T +  +I     L TL   +N L
Sbjct: 21  PASLEYLDLYDNRLTSVPDDLWSLTGLRVLNLATNRLTTVSPSIGALRRLHTLDLGHNRL 80

Query: 114 TAESLPKDMSNLKNLKVF-NLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           +A  LP ++  L  L  +  +S N+L +FP+ +  +  LKYL   +N ++ +P +++ L 
Sbjct: 81  SA--LPDEIGELSGLTEYLYVSDNELTEFPVALCSLGRLKYLGCTDNRISTLPEDLSGLA 138

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L GN L +IP++ G L  L  L L  N+L SLP+SI +L  L+ L L  N+L +
Sbjct: 139 SLRELRLYGNGLIEIPESLGTLSALRELHLRKNRLTSLPSSIGDLSELRQLDLRENRLVS 198

Query: 233 LPTEIITLKCLSEKLKSLLLHNNK 256
           LP+   TL  LS KL  L L  NK
Sbjct: 199 LPS---TLAGLS-KLDKLDLRWNK 218



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 79/239 (33%), Positives = 115/239 (48%), Gaps = 24/239 (10%)

Query: 84  LDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPI 143
           L+LS   +T L        L  L   +N LT  S+P D+ +L  L+V NL+ N+L     
Sbjct: 5   LELSGQGLTTLSGVPLPASLEYLDLYDNRLT--SVPDDLWSLTGLRVLNLATNRLTTVSP 62

Query: 144 QILDIPTLKYLYLGNNSLNHVPREINKLCKL-HVLSLGGNSLTDIPDTFGDLYQLEALIL 202
            I  +  L  L LG+N L+ +P EI +L  L   L +  N LT+ P     L +L+ L  
Sbjct: 63  SIGALRRLHTLDLGHNRLSALPDEIGELSGLTEYLYVSDNELTEFPVALCSLGRLKYLGC 122

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
           +DN++ +LP  +S L  L+ L L+ N L  +P  + TL  L E    L L  N+L +LP+
Sbjct: 123 TDNRISTLPEDLSGLASLRELRLYGNGLIEIPESLGTLSALRE----LHLRKNRLTSLPS 178

Query: 263 EIITLKCLSELSLRDNPLV----------------IRFVSDMTYKPPSLLELASRTLKV 305
            I  L  L +L LR+N LV                +R+  D   +PP L E  +R   V
Sbjct: 179 SIGDLSELRQLDLRENRLVSLPSTLAGLSKLDKLDLRWNKDF-REPPWLAEFEARGCMV 236


>gi|213627581|gb|AAI71620.1| Zgc:152984 protein [Danio rerio]
          Length = 606

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 112/224 (50%), Gaps = 7/224 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAE 116
           +  L L  N L   P +  K T L  LDL +N  T +P+ +     +  L    N LT  
Sbjct: 163 LQILELRENQLKMLPKSMHKLTQLERLDLGSNEFTEVPEVLEQLTGIRELWMDGNKLTF- 221

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            +P  +  LK L   ++S N +E    QI     L+ L L NN+L  +P  I  L KL  
Sbjct: 222 -VPGMIGALKQLSYLDVSKNNVEMVEEQISGCENLQDLLLSNNALTQLPGSIGSLKKLST 280

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L +  N L  +PDT G L  L+ L  S N++E+LP+SI     L++    +N L  +P E
Sbjct: 281 LKVDDNQLMYLPDTIGGLSHLDELDCSFNEIEALPSSIGQCVNLRTFAADHNLLAQMPPE 340

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           + +LK ++     L LH+NKL  LP E+  ++ L  ++L DN L
Sbjct: 341 MGSLKNVT----VLFLHSNKLENLPEEMGDMQKLKVINLSDNKL 380



 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 130/293 (44%), Gaps = 53/293 (18%)

Query: 23  SIKTLDFSYSSLD---------SETL------ATQIELLPNNDYNKKPENIDTLLLYH-- 65
           ++ TLD+S+ SL+          +TL      A QIE LP   +N +       LLY   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFSFEKTLEELYLDANQIEELPKQLFNCQ-------LLYRLS 75

Query: 66  ---NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-----------PLSTL----- 106
              N+L+  P   +   NLR LD+S N I   P+ I N            P+S L     
Sbjct: 76  LPDNDLTVLPPGIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPEGFT 135

Query: 107 ------IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                     N    E LP     L  L++  L  NQL+  P  +  +  L+ L LG+N 
Sbjct: 136 QLLSLSQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMHKLTQLERLDLGSNE 195

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
              VP  + +L  +  L + GN LT +P   G L QL  L +S N +E +   IS  + L
Sbjct: 196 FTEVPEVLEQLTGIRELWMDGNKLTFVPGMIGALKQLSYLDVSKNNVEMVEEQISGCENL 255

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           + LLL NN L  LP  I +LK    KL +L + +N+L  LP  I  L  L EL
Sbjct: 256 QDLLLSNNALTQLPGSIGSLK----KLSTLKVDDNQLMYLPDTIGGLSHLDEL 304



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 3/169 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           NN+    +  S   NL+ L LSNN +T LP +I +   LSTL   +N L    LP  +  
Sbjct: 240 NNVEMVEEQISGCENLQDLLLSNNALTQLPGSIGSLKKLSTLKVDDNQLMY--LPDTIGG 297

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L +L   + S N++E  P  I     L+     +N L  +P E+  L  + VL L  N L
Sbjct: 298 LSHLDELDCSFNEIEALPSSIGQCVNLRTFAADHNLLAQMPPEMGSLKNVTVLFLHSNKL 357

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
            ++P+  GD+ +L+ + LSDN+L +LP S + L  + ++ L  N+ + L
Sbjct: 358 ENLPEEMGDMQKLKVINLSDNKLRNLPYSFTKLNQMTAMWLSENQSKPL 406



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 15/229 (6%)

Query: 41  TQIELL--PNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRIT 92
           TQ+E L   +N++ + PE       I  L +  N L+F P        L  LD+S N + 
Sbjct: 184 TQLERLDLGSNEFTEVPEVLEQLTGIRELWMDGNKLTFVPGMIGALKQLSYLDVSKNNVE 243

Query: 93  HLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
            + + I+    L  L+  NN LT   LP  + +LK L    +  NQL   P  I  +  L
Sbjct: 244 MVEEQISGCENLQDLLLSNNALT--QLPGSIGSLKKLSTLKVDDNQLMYLPDTIGGLSHL 301

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
             L    N +  +P  I +   L   +   N L  +P   G L  +  L L  N+LE+LP
Sbjct: 302 DELDCSFNEIEALPSSIGQCVNLRTFAADHNLLAQMPPEMGSLKNVTVLFLHSNKLENLP 361

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
             + +++ LK + L +NKLR LP     L     ++ ++ L  N+ + L
Sbjct: 362 EEMGDMQKLKVINLSDNKLRNLPYSFTKLN----QMTAMWLSENQSKPL 406


>gi|329664308|ref|NP_001192376.1| leucine-rich repeat and death domain-containing protein 1 [Bos
           taurus]
 gi|296488711|tpg|DAA30824.1| TPA: leucine-rich repeat and death domain-containing protein-like
           [Bos taurus]
          Length = 863

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 119/221 (53%), Gaps = 10/221 (4%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMS 123
            N L  F ++     NL  LDL  N+I  +P +I+N   L  LI   N L  E+ P ++ 
Sbjct: 522 ENKLLLFSEHLCSLINLEYLDLGKNKIRKIPPSISNMVSLHVLILCYNKL--ETFPTEVC 579

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREI---NKLCKLHVLSLG 180
            L NL+V +LS NQ++  P +I ++  ++ L + NN   + P E+     L +L++  + 
Sbjct: 580 TLDNLRVLDLSENQIQTIPSEICNLKGIQKLNISNNQFIYFPVELCHLQSLEELNISQIN 639

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           G  LT +P+   ++ +L+ L +S+N +  +P +I  L+ L SL   NN++R LP+  ++L
Sbjct: 640 GKKLTRLPEELSNMTKLKGLDISNNAIREMPTNIGELRSLVSLNADNNQIRYLPSSFLSL 699

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             L +    L L  N L  LP+ I  L  L E++  DNPL+
Sbjct: 700 NALQQ----LNLSGNNLSVLPSGIYNLFSLKEINFDDNPLL 736



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/296 (31%), Positives = 143/296 (48%), Gaps = 46/296 (15%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           ++E++ N   N K   I  L+L  N L   P+N S    L  L LS+N++T LP+ I   
Sbjct: 363 KLEVISNKIENFKELRI--LILDKNLLKDMPENISHCAVLECLSLSDNKLTELPKNIHKL 420

Query: 102 P-LSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
             L  L I RN L+    +P+ +S+L N+     SGN +  FPI+I     +  + L  N
Sbjct: 421 KNLRKLHINRNYLV---KIPEYISHLNNMFSLEFSGNFITDFPIEIKSCKNIAKVELSYN 477

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIP-----------------------DTFGDLYQ 196
            + + P  +  L  LH LSL GN +++IP                       +    L  
Sbjct: 478 KIMYFPLGLCALDSLHYLSLNGNYISEIPVDISFNKQLLHLEFNENKLLLFSEHLCSLIN 537

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
           LE L L  N++  +P SISN+  L  L+L  NKL T PTE+ TL    + L+ L L  N+
Sbjct: 538 LEYLDLGKNKIRKIPPSISNMVSLHVLILCYNKLETFPTEVCTL----DNLRVLDLSENQ 593

Query: 257 LRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQ 312
           ++T+P+EI  LK + +L++ +N  +        Y P  L  L S    + E++ SQ
Sbjct: 594 IQTIPSEICNLKGIQKLNISNNQFI--------YFPVELCHLQS----LEELNISQ 637



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 89/330 (26%), Positives = 133/330 (40%), Gaps = 81/330 (24%)

Query: 42  QIELLPNNDYNKKPENI------DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLP 95
           +I +L  N     PENI      + L L  N L+  P N  K  NLR L ++ N +  +P
Sbjct: 378 RILILDKNLLKDMPENISHCAVLECLSLSDNKLTELPKNIHKLKNLRKLHINRNYLVKIP 437

Query: 96  QAI----------------TNFPLSTLIARNNLLTAES------LPKDMSNLKNLKVFNL 133
           + I                T+FP+     +N      S       P  +  L +L   +L
Sbjct: 438 EYISHLNNMFSLEFSGNFITDFPIEIKSCKNIAKVELSYNKIMYFPLGLCALDSLHYLSL 497

Query: 134 SGNQLEQFPIQI-----------------------LDIPTLKYLYLGNNSLNHVPREINK 170
           +GN + + P+ I                         +  L+YL LG N +  +P  I+ 
Sbjct: 498 NGNYISEIPVDISFNKQLLHLEFNENKLLLFSEHLCSLINLEYLDLGKNKIRKIPPSISN 557

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           +  LHVL L  N L   P     L  L  L LS+NQ++++P+ I NLK ++ L + NN+ 
Sbjct: 558 MVSLHVLILCYNKLETFPTEVCTLDNLRVLDLSENQIQTIPSEICNLKGIQKLNISNNQF 617

Query: 231 RTLPTEIITLKCLSE----------------------KLKSLLLHNNKLRTLPTEIITLK 268
              P E+  L+ L E                      KLK L + NN +R +PT I  L+
Sbjct: 618 IYFPVELCHLQSLEELNISQINGKKLTRLPEELSNMTKLKGLDISNNAIREMPTNIGELR 677

Query: 269 CLSELSLRDNPLVIRFVSDMTYKPPSLLEL 298
            L  L+  +N         + Y P S L L
Sbjct: 678 SLVSLNADNN--------QIRYLPSSFLSL 699



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 117/227 (51%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N L   PD  S   NLR+L+L  NR+T  P+A+   P L +L    NL+ 
Sbjct: 260 KNLEILNLAKNKLRHIPDALSSLKNLRALNLEYNRLTIFPKALCFLPKLISLNLTGNLIN 319

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLPK++  LKNL+   L  N+L    ++I  +  +K L L +N L  +  +I    +L
Sbjct: 320 --SLPKEIKELKNLEKLLLDHNKLTFLAVEIFLLLKMKELQLTDNKLEVISNKIENFKEL 377

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  N L D+P+       LE L LSDN+L  LP +I  LK L+ L ++ N L  +P
Sbjct: 378 RILILDKNLLKDMPENISHCAVLECLSLSDNKLTELPKNIHKLKNLRKLHINRNYLVKIP 437

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             I  L      + SL    N +   P EI + K ++++ L  N ++
Sbjct: 438 EYISHLN----NMFSLEFSGNFITDFPIEIKSCKNIAKVELSYNKIM 480



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 27/189 (14%)

Query: 60  TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLP 119
            L+L +N L  FP       NLR LDLS N+I                        +++P
Sbjct: 563 VLILCYNKLETFPTEVCTLDNLRVLDLSENQI------------------------QTIP 598

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYL---YLGNNSLNHVPREINKLCKLHV 176
            ++ NLK ++  N+S NQ   FP+++  + +L+ L    +    L  +P E++ + KL  
Sbjct: 599 SEICNLKGIQKLNISNNQFIYFPVELCHLQSLEELNISQINGKKLTRLPEELSNMTKLKG 658

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L +  N++ ++P   G+L  L +L   +NQ+  LP+S  +L  L+ L L  N L  LP+ 
Sbjct: 659 LDISNNAIREMPTNIGELRSLVSLNADNNQIRYLPSSFLSLNALQQLNLSGNNLSVLPSG 718

Query: 237 IITLKCLSE 245
           I  L  L E
Sbjct: 719 IYNLFSLKE 727



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 108/225 (48%), Gaps = 8/225 (3%)

Query: 60  TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN--FPLSTLIARNNLLTAES 117
           T+ L    L  FP +  K   ++ L L  N I     A +     L  L  + N L+  +
Sbjct: 148 TINLKAKGLQEFPKDILKVKYVKYLYLDENEIKSFKGADSRDMLGLEILSIQKNGLS--T 205

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LP ++  L NLK+ N+S NQ+   P +I  +  +K L+L NN +   P  +  L  L +L
Sbjct: 206 LPSEIQLLHNLKLLNVSYNQISHIPKEISQLGNIKELFLNNNCIEDFPSGLESLKNLEIL 265

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
           +L  N L  IPD    L  L AL L  N+L   P ++  L  L SL L  N + +LP EI
Sbjct: 266 NLAKNKLRHIPDALSSLKNLRALNLEYNRLTIFPKALCFLPKLISLNLTGNLINSLPKEI 325

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
                  + L+ LLL +NKL  L  EI  L  + EL L DN L +
Sbjct: 326 KE----LKNLEKLLLDHNKLTFLAVEIFLLLKMKELQLTDNKLEV 366



 Score = 49.7 bits (117), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 3/112 (2%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLK 126
           L+  P+  S  T L+ LD+SNN I  +P  I     L +L A NN +    LP    +L 
Sbjct: 643 LTRLPEELSNMTKLKGLDISNNAIREMPTNIGELRSLVSLNADNNQI--RYLPSSFLSLN 700

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
            L+  NLSGN L   P  I ++ +LK +   +N L   P EI K  +L+ ++
Sbjct: 701 ALQQLNLSGNNLSVLPSGIYNLFSLKEINFDDNPLLRPPMEICKGKQLYTIA 752


>gi|254380384|ref|ZP_04995750.1| leucine-rich repeat protein [Streptomyces sp. Mg1]
 gi|194339295|gb|EDX20261.1| leucine-rich repeat protein [Streptomyces sp. Mg1]
          Length = 288

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/222 (32%), Positives = 105/222 (47%), Gaps = 30/222 (13%)

Query: 60  TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHL-PQAITNFPLSTLIARNNLLTAESL 118
           TL L+  NL   P++  + T L  L L++N +T + PQ                      
Sbjct: 54  TLSLWKQNLGSLPESLWQRTELHVLILADNALTRISPQ---------------------- 91

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
              ++ L+ L   +L  N+L   P ++ ++P  KYLYL +N L  +PR + +L  L  L+
Sbjct: 92  ---IAQLRQLHTLDLGHNELASIPDELTELPLTKYLYLHDNQLKQIPRSLGRLTALRYLN 148

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           LGGN LT +PDT G +  L  L    N+L +LP SI  L  L+ L L  N L  LP  + 
Sbjct: 149 LGGNQLTSLPDTIGKMIGLVELRAEHNRLTALPESIGRLHQLRELWLRGNTLTCLPESVS 208

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            L     +L+ + L  N L  +P  +  L  L  L LR N L
Sbjct: 209 DLA----ELRHVDLRENALTDVPEALAGLSRLRHLDLRSNRL 246



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 118/237 (49%), Gaps = 16/237 (6%)

Query: 13  SSDSDSFKTVSI-KTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFF 71
           +S S+S++   +  TL     +L S         LP + + +    +  L+L  N L+  
Sbjct: 40  ASPSESWRHADVTATLSLWKQNLGS---------LPESLWQRT--ELHVLILADNALTRI 88

Query: 72  PDNASKFTNLRSLDLSNNRITHLPQAITNFPLST-LIARNNLLTAESLPKDMSNLKNLKV 130
               ++   L +LDL +N +  +P  +T  PL+  L   +N L  + +P+ +  L  L+ 
Sbjct: 89  SPQIAQLRQLHTLDLGHNELASIPDELTELPLTKYLYLHDNQL--KQIPRSLGRLTALRY 146

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NL GNQL   P  I  +  L  L   +N L  +P  I +L +L  L L GN+LT +P++
Sbjct: 147 LNLGGNQLTSLPDTIGKMIGLVELRAEHNRLTALPESIGRLHQLRELWLRGNTLTCLPES 206

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
             DL +L  + L +N L  +P +++ L  L+ L L +N+L TLP  +  L  L EKL
Sbjct: 207 VSDLAELRHVDLRENALTDVPEALAGLSRLRHLDLRSNRLHTLPNWLPELPSL-EKL 262



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 60/110 (54%), Gaps = 3/110 (2%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
           HN L+  P++  +   LR L L  N +T LP+++++   L  +  R N LT   +P+ ++
Sbjct: 174 HNRLTALPESIGRLHQLRELWLRGNTLTCLPESVSDLAELRHVDLRENALT--DVPEALA 231

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
            L  L+  +L  N+L   P  + ++P+L+ L L  N++   PR ++ L +
Sbjct: 232 GLSRLRHLDLRSNRLHTLPNWLPELPSLEKLDLRWNNIEPAPRLLDLLAQ 281


>gi|116487570|gb|AAI25846.1| Zgc:152984 [Danio rerio]
          Length = 590

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 112/224 (50%), Gaps = 7/224 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAE 116
           +  L L  N L   P +  K T L  LDL +N  T +P+ +     +  L    N LT  
Sbjct: 147 LQILELRENQLKMLPKSMHKLTQLERLDLGSNEFTEVPEVLEQLTGIRELWMDGNKLTF- 205

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            +P  +  LK L   ++S N +E    QI     L+ L L NN+L  +P  I  L KL  
Sbjct: 206 -VPGMIGALKQLSYLDVSKNNVEMVEEQISGCENLQDLLLSNNALTQLPGSIGSLKKLST 264

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L +  N L  +PDT G L  L+ L  S N++E+LP+SI     L++    +N L  +P E
Sbjct: 265 LKVDDNQLMYLPDTIGGLSHLDELDCSFNEIEALPSSIGQCVNLRTFAADHNLLAQMPPE 324

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           + +LK ++     L LH+NKL  LP E+  ++ L  ++L DN L
Sbjct: 325 MGSLKNVT----VLFLHSNKLENLPEEMGDMQKLKVINLSDNKL 364



 Score = 98.2 bits (243), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 116/261 (44%), Gaps = 38/261 (14%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYH-----NNLSFFPDNASKFTNLRSLDLSNNRITHL 94
           A QIE LP   +N +       LLY      N+L+  P   +   NLR LD+S N I   
Sbjct: 39  ANQIEELPKQLFNCQ-------LLYRLSLPDNDLTVLPPGIANLINLRELDVSKNGIQEF 91

Query: 95  PQAITNF-----------PLSTL-----------IARNNLLTAESLPKDMSNLKNLKVFN 132
           P+ I N            P+S L               N    E LP     L  L++  
Sbjct: 92  PENIKNCKVLAIVEASVNPISKLPEGFTQLLSLSQLYLNDAFLEFLPASFGRLTKLQILE 151

Query: 133 LSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFG 192
           L  NQL+  P  +  +  L+ L LG+N    VP  + +L  +  L + GN LT +P   G
Sbjct: 152 LRENQLKMLPKSMHKLTQLERLDLGSNEFTEVPEVLEQLTGIRELWMDGNKLTFVPGMIG 211

Query: 193 DLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLL 252
            L QL  L +S N +E +   IS  + L+ LLL NN L  LP  I +LK    KL +L +
Sbjct: 212 ALKQLSYLDVSKNNVEMVEEQISGCENLQDLLLSNNALTQLPGSIGSLK----KLSTLKV 267

Query: 253 HNNKLRTLPTEIITLKCLSEL 273
            +N+L  LP  I  L  L EL
Sbjct: 268 DDNQLMYLPDTIGGLSHLDEL 288



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 3/169 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           NN+    +  S   NL+ L LSNN +T LP +I +   LSTL   +N L    LP  +  
Sbjct: 224 NNVEMVEEQISGCENLQDLLLSNNALTQLPGSIGSLKKLSTLKVDDNQLMY--LPDTIGG 281

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L +L   + S N++E  P  I     L+     +N L  +P E+  L  + VL L  N L
Sbjct: 282 LSHLDELDCSFNEIEALPSSIGQCVNLRTFAADHNLLAQMPPEMGSLKNVTVLFLHSNKL 341

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
            ++P+  GD+ +L+ + LSDN+L +LP S + L  + ++ L  N+ + L
Sbjct: 342 ENLPEEMGDMQKLKVINLSDNKLRNLPYSFTKLNQMTAMWLSENQSKPL 390



 Score = 77.0 bits (188), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 15/229 (6%)

Query: 41  TQIELL--PNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRIT 92
           TQ+E L   +N++ + PE       I  L +  N L+F P        L  LD+S N + 
Sbjct: 168 TQLERLDLGSNEFTEVPEVLEQLTGIRELWMDGNKLTFVPGMIGALKQLSYLDVSKNNVE 227

Query: 93  HLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
            + + I+    L  L+  NN LT   LP  + +LK L    +  NQL   P  I  +  L
Sbjct: 228 MVEEQISGCENLQDLLLSNNALT--QLPGSIGSLKKLSTLKVDDNQLMYLPDTIGGLSHL 285

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
             L    N +  +P  I +   L   +   N L  +P   G L  +  L L  N+LE+LP
Sbjct: 286 DELDCSFNEIEALPSSIGQCVNLRTFAADHNLLAQMPPEMGSLKNVTVLFLHSNKLENLP 345

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
             + +++ LK + L +NKLR LP     L     ++ ++ L  N+ + L
Sbjct: 346 EEMGDMQKLKVINLSDNKLRNLPYSFTKLN----QMTAMWLSENQSKPL 390



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 6/173 (3%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           E LPK + N + L   +L  N L   P  I ++  L+ L +  N +   P  I     L 
Sbjct: 43  EELPKQLFNCQLLYRLSLPDNDLTVLPPGIANLINLRELDVSKNGIQEFPENIKNCKVLA 102

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           ++    N ++ +P+ F  L  L  L L+D  LE LPAS   L  L+ L L  N+L+ LP 
Sbjct: 103 IVEASVNPISKLPEGFTQLLSLSQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPK 162

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDM 288
            +  L     +L+ L L +N+   +P  +  L  + EL +  N L   FV  M
Sbjct: 163 SMHKLT----QLERLDLGSNEFTEVPEVLEQLTGIRELWMDGNKLT--FVPGM 209



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 66/255 (25%), Positives = 94/255 (36%), Gaps = 89/255 (34%)

Query: 116 ESLPKDMSNL-KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           E +PK++ +  K L+   L  NQ+E+ P Q+ +   L  L L +N L  +P  I  L  L
Sbjct: 19  EQVPKEIFSFEKTLEELYLDANQIEELPKQLFNCQLLYRLSLPDNDLTVLPPGIANLINL 78

Query: 175 HVLSLGGNSLTDIPD--------------------------------------------- 189
             L +  N + + P+                                             
Sbjct: 79  RELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPEGFTQLLSLSQLYLNDAFLEFLP 138

Query: 190 -TFGDLYQLEALILSDNQLESLPASISNLKML-----------------------KSLLL 225
            +FG L +L+ L L +NQL+ LP S+  L  L                       + L +
Sbjct: 139 ASFGRLTKLQILELRENQLKMLPKSMHKLTQLERLDLGSNEFTEVPEVLEQLTGIRELWM 198

Query: 226 HNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIIT 266
             NKL  +P  I  LK LS                   E L+ LLL NN L  LP  I +
Sbjct: 199 DGNKLTFVPGMIGALKQLSYLDVSKNNVEMVEEQISGCENLQDLLLSNNALTQLPGSIGS 258

Query: 267 LKCLSELSLRDNPLV 281
           LK LS L + DN L+
Sbjct: 259 LKKLSTLKVDDNQLM 273



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 49/161 (30%), Positives = 71/161 (44%), Gaps = 20/161 (12%)

Query: 138 LEQFPIQILDIP-TLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQ 196
           LEQ P +I     TL+ LYL  N +  +P+++     L+ LSL  N LT +P    +L  
Sbjct: 18  LEQVPKEIFSFEKTLEELYLDANQIEELPKQLFNCQLLYRLSLPDNDLTVLPPGIANLIN 77

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE----------- 245
           L  L +S N ++  P +I N K+L  +    N +  LP     L  LS+           
Sbjct: 78  LRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPEGFTQLLSLSQLYLNDAFLEFL 137

Query: 246 --------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
                   KL+ L L  N+L+ LP  +  L  L  L L  N
Sbjct: 138 PASFGRLTKLQILELRENQLKMLPKSMHKLTQLERLDLGSN 178


>gi|440894335|gb|ELR46812.1| hypothetical protein M91_11597 [Bos grunniens mutus]
          Length = 863

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 119/221 (53%), Gaps = 10/221 (4%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMS 123
            N L  F ++     NL  LDL  N+I  +P +I+N   L  LI   N L  E+ P ++ 
Sbjct: 522 ENKLLLFSEHLCSLINLEYLDLGKNKIRKIPPSISNMVSLHVLILCYNKL--ETFPTEVC 579

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREI---NKLCKLHVLSLG 180
            L NL+V +LS NQ++  P +I ++  ++ L + NN   + P E+     L +L++  + 
Sbjct: 580 TLDNLRVLDLSENQIQTIPSEICNLKGIQKLNISNNQFIYFPVELCHLQSLEELNISQIN 639

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           G  LT +P+   ++ +L+ L +S+N +  +P +I  L+ L SL   NN++R LP+  ++L
Sbjct: 640 GKKLTRLPEELSNMTKLKGLDISNNAIREMPTNIGELRSLVSLNADNNQIRYLPSSFLSL 699

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             L +    L L  N L  LP+ I  L  L E++  DNPL+
Sbjct: 700 NALQQ----LNLSGNNLSVLPSGIYNLFSLKEINFDDNPLL 736



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 93/296 (31%), Positives = 143/296 (48%), Gaps = 46/296 (15%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           ++E++ N   N K   I  L+L  N L   P+N S    L  L LS+N++T LP+ I   
Sbjct: 363 KLEVISNKIENFKELRI--LILDKNLLKDMPENISHCAVLECLSLSDNKLTELPKNIHKL 420

Query: 102 P-LSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
             L  L I RN L+    +P+ +S+L N+     SGN +  FPI+I     +  + L  N
Sbjct: 421 KNLRKLHINRNYLV---KIPEYISHLNNMFSLEFSGNFITDFPIEIKSCKNIAKVELSYN 477

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIP-----------------------DTFGDLYQ 196
            + + P  +  L  L+ LSL GN +++IP                       +    L  
Sbjct: 478 KIMYFPLGLCALDSLYYLSLNGNYISEIPVDISFSKQLLHLEFNENKLLLFSEHLCSLIN 537

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
           LE L L  N++  +P SISN+  L  L+L  NKL T PTE+ TL    + L+ L L  N+
Sbjct: 538 LEYLDLGKNKIRKIPPSISNMVSLHVLILCYNKLETFPTEVCTL----DNLRVLDLSENQ 593

Query: 257 LRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQ 312
           ++T+P+EI  LK + +L++ +N  +        Y P  L  L S    + E++ SQ
Sbjct: 594 IQTIPSEICNLKGIQKLNISNNQFI--------YFPVELCHLQS----LEELNISQ 637



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 119/264 (45%), Gaps = 31/264 (11%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           N+ +L    N ++ FP       N+  ++LS N+I + P  +        ++ N    +E
Sbjct: 445 NMFSLEFSGNFITDFPIEIKSCKNIAKVELSYNKIMYFPLGLCALDSLYYLSLNGNYISE 504

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            +P D+S  K L     + N+L  F   +  +  L+YL LG N +  +P  I+ +  LHV
Sbjct: 505 -IPVDISFSKQLLHLEFNENKLLLFSEHLCSLINLEYLDLGKNKIRKIPPSISNMVSLHV 563

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L   P     L  L  L LS+NQ++++P+ I NLK ++ L + NN+    P E
Sbjct: 564 LILCYNKLETFPTEVCTLDNLRVLDLSENQIQTIPSEICNLKGIQKLNISNNQFIYFPVE 623

Query: 237 IITLKCLSE----------------------KLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           +  L+ L E                      KLK L + NN +R +PT I  L+ L  L+
Sbjct: 624 LCHLQSLEELNISQINGKKLTRLPEELSNMTKLKGLDISNNAIREMPTNIGELRSLVSLN 683

Query: 275 LRDNPLVIRFVSDMTYKPPSLLEL 298
             +N         + Y P S L L
Sbjct: 684 ADNN--------QIRYLPSSFLSL 699



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 77/227 (33%), Positives = 117/227 (51%), Gaps = 7/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N++ L L  N L   PD  S   NLR+L+L  NR+T  P+A+   P L +L    NL+ 
Sbjct: 260 KNLEILNLAKNKLRHIPDALSSLKNLRALNLEYNRLTIFPKALCFLPKLISLNLTGNLIN 319

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLPK++  LKNL+   L  N+L    ++I  +  +K L L +N L  +  +I    +L
Sbjct: 320 --SLPKEIKELKNLEKLLLDHNKLTFLAVEIFLLLKMKELQLTDNKLEVISNKIENFKEL 377

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  N L D+P+       LE L LSDN+L  LP +I  LK L+ L ++ N L  +P
Sbjct: 378 RILILDKNLLKDMPENISHCAVLECLSLSDNKLTELPKNIHKLKNLRKLHINRNYLVKIP 437

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             I  L      + SL    N +   P EI + K ++++ L  N ++
Sbjct: 438 EYISHLN----NMFSLEFSGNFITDFPIEIKSCKNIAKVELSYNKIM 480



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 91/189 (48%), Gaps = 27/189 (14%)

Query: 60  TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLP 119
            L+L +N L  FP       NLR LDLS N+I                        +++P
Sbjct: 563 VLILCYNKLETFPTEVCTLDNLRVLDLSENQI------------------------QTIP 598

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYL---YLGNNSLNHVPREINKLCKLHV 176
            ++ NLK ++  N+S NQ   FP+++  + +L+ L    +    L  +P E++ + KL  
Sbjct: 599 SEICNLKGIQKLNISNNQFIYFPVELCHLQSLEELNISQINGKKLTRLPEELSNMTKLKG 658

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L +  N++ ++P   G+L  L +L   +NQ+  LP+S  +L  L+ L L  N L  LP+ 
Sbjct: 659 LDISNNAIREMPTNIGELRSLVSLNADNNQIRYLPSSFLSLNALQQLNLSGNNLSVLPSG 718

Query: 237 IITLKCLSE 245
           I  L  L E
Sbjct: 719 IYNLFSLKE 727



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 77/225 (34%), Positives = 108/225 (48%), Gaps = 8/225 (3%)

Query: 60  TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN--FPLSTLIARNNLLTAES 117
           T+ L    L  FP +  K   ++ L L  N I     A +     L  L  + N L+  +
Sbjct: 148 TINLKAKGLQEFPKDILKVKYVKYLYLDENEIKSFKGADSRDMLGLEILSIQKNGLS--T 205

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LP ++  L NLK+ N+S NQ+   P +I  +  +K L+L NN +   P  +  L  L +L
Sbjct: 206 LPSEIQLLHNLKLLNVSYNQISHIPKEISQLGNIKELFLNNNCIEDFPSGLESLKNLEIL 265

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
           +L  N L  IPD    L  L AL L  N+L   P ++  L  L SL L  N + +LP EI
Sbjct: 266 NLAKNKLRHIPDALSSLKNLRALNLEYNRLTIFPKALCFLPKLISLNLTGNLINSLPKEI 325

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
                  + L+ LLL +NKL  L  EI  L  + EL L DN L +
Sbjct: 326 KE----LKNLEKLLLDHNKLTFLAVEIFLLLKMKELQLTDNKLEV 366



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 57/112 (50%), Gaps = 3/112 (2%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLK 126
           L+  P+  S  T L+ LD+SNN I  +P  I     L +L A NN +    LP    +L 
Sbjct: 643 LTRLPEELSNMTKLKGLDISNNAIREMPTNIGELRSLVSLNADNNQI--RYLPSSFLSLN 700

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
            L+  NLSGN L   P  I ++ +LK +   +N L   P EI K  +L+ ++
Sbjct: 701 ALQQLNLSGNNLSVLPSGIYNLFSLKEINFDDNPLLRPPMEICKGKQLYTIA 752


>gi|327282758|ref|XP_003226109.1| PREDICTED: leucine-rich repeat-containing protein 1-like [Anolis
           carolinensis]
          Length = 524

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 114/209 (54%), Gaps = 7/209 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTA 115
           N+ +L L  N L++ P++ ++   L  LDL NN + +LP+ I   + L  L    N L  
Sbjct: 152 NLASLELRENLLTYLPESVAQLQRLEELDLGNNDLYNLPETIGALYNLKDLWLDGNQLA- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ +LKNL   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 211 -ELPQEIGSLKNLLCLDISENKLERLPEEISGLTSLTDLLISQNLLEVLPDGIGKLKKLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N L  + +  GD   L  L+L++NQL +LP SI  LK L  L +  NKL +LP 
Sbjct: 270 ILKVDQNRLVQLTEAVGDCESLTELVLTENQLLTLPKSIGRLKKLNVLNVDRNKLVSLPK 329

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           EI    C S  L    + +N+L  +P EI
Sbjct: 330 EIGG--CCS--LNVFSVRDNRLSRIPPEI 354



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 125/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      L  N++   P++ S   +L+  D S N +T LP++  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKSLQVADFSGNPLTRLPESFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + ++LP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 126 ELQNLTCLSVNDI-SLQALPENIGNLYNLASLELRENLLTYLPESVAQLQRLEELDLGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L ++P  I  L  L  L L GN L ++P   G L  L  L +S+N+LE LP  IS L  
Sbjct: 185 DLYNLPETIGALYNLKDLWLDGNQLAELPQEIGSLKNLLCLDISENKLERLPEEISGLTS 244

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTL 260
           L  LL+  N L  LP  I  LK LS                   E L  L+L  N+L TL
Sbjct: 245 LTDLLISQNLLEVLPDGIGKLKKLSILKVDQNRLVQLTEAVGDCESLTELVLTENQLLTL 304

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           P  I  LK L+ L++  N LV
Sbjct: 305 PKSIGRLKKLNVLNVDRNKLV 325



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/227 (36%), Positives = 117/227 (51%), Gaps = 9/227 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTA 115
           ++ LLL  N L   P    +   LR L LS+N I  LP  I NF  L  L ++RN++   
Sbjct: 38  LEELLLDANQLRELPKPFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDI--- 94

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+ +S  K+L+V + SGN L + P    ++  L  L + + SL  +P  I  L  L 
Sbjct: 95  PEIPESISFCKSLQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQALPENIGNLYNLA 154

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +P++   L +LE L L +N L +LP +I  L  LK L L  N+L  LP 
Sbjct: 155 SLELRENLLTYLPESVAQLQRLEELDLGNNDLYNLPETIGALYNLKDLWLDGNQLAELPQ 214

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           EI +LK     L  L +  NKL  LP EI  L  L++L +  N L +
Sbjct: 215 EIGSLK----NLLCLDISENKLERLPEEISGLTSLTDLLISQNLLEV 257



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 107/224 (47%), Gaps = 14/224 (6%)

Query: 46  LPNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NND    PE      N+  L L  N L+  P       NL  LD+S N++  LP+ I+
Sbjct: 181 LGNNDLYNLPETIGALYNLKDLWLDGNQLAELPQEIGSLKNLLCLDISENKLERLPEEIS 240

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L+ L+   NLL  E LP  +  LK L +  +  N+L Q    + D  +L  L L  
Sbjct: 241 GLTSLTDLLISQNLL--EVLPDGIGKLKKLSILKVDQNRLVQLTEAVGDCESLTELVLTE 298

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P+ I +L KL+VL++  N L  +P   G    L    + DN+L  +P  IS   
Sbjct: 299 NQLLTLPKSIGRLKKLNVLNVDRNKLVSLPKEIGGCCSLNVFSVRDNRLSRIPPEISQAT 358

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
            L  L +  N+L  LP  + +L     KLK+L L +N+ + L T
Sbjct: 359 ELHVLDVAGNRLLHLPMSLTSL-----KLKALWLSDNQSQPLLT 397


>gi|348524302|ref|XP_003449662.1| PREDICTED: protein LAP2 [Oreochromis niloticus]
          Length = 1352

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 93/287 (32%), Positives = 131/287 (45%), Gaps = 43/287 (14%)

Query: 24  IKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNNL 68
           + +LD+S+ SL++         +TL      A QIE LP   +N   + ++ L +  N+L
Sbjct: 29  VTSLDYSHCSLETVPKEIFNFEKTLQELYLDANQIEELPKQLFNC--QLLNRLSMPDNDL 86

Query: 69  SFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-----------PLSTLIARNNLLTA-- 115
           +  P   +   NLR LD+S N I   P+ I N            P+S L      L +  
Sbjct: 87  TVLPAAIANLINLRELDVSKNSIQDFPENIKNCKGLAIVEASVNPISKLPEGFTQLLSLT 146

Query: 116 ---------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPR 166
                    E LP     L  L++  L  NQL+  P  +  +  L+ L LG+N    VP 
Sbjct: 147 QLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMQKLTQLERLDLGSNEFTEVPE 206

Query: 167 EINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLH 226
            + +L  L  L + GN LT +P   G L QL  L +S N LE +   I   + L+ LLL 
Sbjct: 207 VVEQLTGLKELWMDGNKLTFLPGMLGTLKQLVYLDVSKNNLEMVDEQICGCENLQDLLLS 266

Query: 227 NNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           NN L  LP  I TLK    KL +L +  N+L  LP  I  L C+ EL
Sbjct: 267 NNALTQLPGSIGTLK----KLTALKVDENQLMYLPDSIGGLTCIDEL 309



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 109/221 (49%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L  N L   P +  K T L  LDL +N  T +P+ +     L  L    N LT   LP
Sbjct: 171 LELRENQLKMLPKSMQKLTQLERLDLGSNEFTEVPEVVEQLTGLKELWMDGNKLTF--LP 228

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             +  LK L   ++S N LE    QI     L+ L L NN+L  +P  I  L KL  L +
Sbjct: 229 GMLGTLKQLVYLDVSKNNLEMVDEQICGCENLQDLLLSNNALTQLPGSIGTLKKLTALKV 288

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  ++ L  S N++E+LPA+I     +++    +N L  LP E+  
Sbjct: 289 DENQLMYLPDSIGGLTCIDELDCSFNEIEALPATIGQCVNMRTFAADHNFLAQLPPEMGN 348

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K    +   L LH+NKL +LP E+  ++ L  ++L +N L
Sbjct: 349 WK----RATVLFLHSNKLESLPEEMGDMQKLKVINLSNNKL 385



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 62/202 (30%), Positives = 94/202 (46%), Gaps = 8/202 (3%)

Query: 83  SLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           SLD S+  +  +P+ I NF   L  L    N +  E LPK + N + L   ++  N L  
Sbjct: 31  SLDYSHCSLETVPKEIFNFEKTLQELYLDANQI--EELPKQLFNCQLLNRLSMPDNDLTV 88

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P  I ++  L+ L +  NS+   P  I     L ++    N ++ +P+ F  L  L  L
Sbjct: 89  LPAAIANLINLRELDVSKNSIQDFPENIKNCKGLAIVEASVNPISKLPEGFTQLLSLTQL 148

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L+D  LE LPAS   L  L+ L L  N+L+ LP  +  L     +L+ L L +N+   +
Sbjct: 149 YLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMQKLT----QLERLDLGSNEFTEV 204

Query: 261 PTEIITLKCLSELSLRDNPLVI 282
           P  +  L  L EL +  N L  
Sbjct: 205 PEVVEQLTGLKELWMDGNKLTF 226



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/169 (30%), Positives = 82/169 (48%), Gaps = 3/169 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           NNL    +      NL+ L LSNN +T LP +I     L+ L    N L    LP  +  
Sbjct: 245 NNLEMVDEQICGCENLQDLLLSNNALTQLPGSIGTLKKLTALKVDENQLMY--LPDSIGG 302

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L  +   + S N++E  P  I     ++     +N L  +P E+    +  VL L  N L
Sbjct: 303 LTCIDELDCSFNEIEALPATIGQCVNMRTFAADHNFLAQLPPEMGNWKRATVLFLHSNKL 362

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
             +P+  GD+ +L+ + LS+N+L++LP S + L  L ++ L  N+ + L
Sbjct: 363 ESLPEEMGDMQKLKVINLSNNKLKNLPYSFTKLTELTAMWLSENQSKPL 411


>gi|327405650|ref|YP_004346488.1| adenylate cyclase [Fluviicola taffensis DSM 16823]
 gi|327321158|gb|AEA45650.1| Adenylate cyclase [Fluviicola taffensis DSM 16823]
          Length = 345

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/270 (31%), Positives = 135/270 (50%), Gaps = 25/270 (9%)

Query: 27  LDFSYSSLDSETLATQIELLPNNDY--------------NKKPENIDTLLLYHNNLSFFP 72
           LD S+  LD  T   +I  L N +Y               KK +N+  L L +N L   P
Sbjct: 41  LDLSWKKLD--TFPLEICTLTNLEYLNLSYTFIPGLPPEIKKLKNLKILNLAYNYLKTLP 98

Query: 73  DNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE--SLPKDMSNLKNLKV 130
               + +NL +L L+ N +  LP  +      T ++R  ++  E   +P  +  L NL +
Sbjct: 99  KEIGELSNLEALQLNANNLRELPSEMKYL---TALSRLQIIQNEFDEIPPVIFELSNLAL 155

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            +LS N++ + P ++ ++ +L+ L      L  +P+EI +L +L+ LSL  N +T +P+ 
Sbjct: 156 LDLSNNKISELPRELGNLKSLRKLLANQCHLTQIPKEIGELSQLYFLSLENNRITSLPNE 215

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
            G+   +E+L + DN LESLP  I NL +L  L L NN+L  LP  I  L      L +L
Sbjct: 216 IGNCRLIESLFIHDNLLESLPDRIGNLTLLTQLSLKNNQLTQLPLSIGNLT----NLFAL 271

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            + NNK+  LP  +  LK L  ++   NP+
Sbjct: 272 DISNNKITVLPDALCGLKQLETITAYSNPI 301



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 114/229 (49%), Gaps = 9/229 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNL 112
           P+ +  L L    L  FP      TNL  L+LS   I  LP  I     L  L +A N L
Sbjct: 35  PQKVFILDLSWKKLDTFPLEICTLTNLEYLNLSYTFIPGLPPEIKKLKNLKILNLAYNYL 94

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
              ++LPK++  L NL+   L+ N L + P ++  +  L  L +  N  + +P  I +L 
Sbjct: 95  ---KTLPKEIGELSNLEALQLNANNLRELPSEMKYLTALSRLQIIQNEFDEIPPVIFELS 151

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L +L L  N ++++P   G+L  L  L+ +   L  +P  I  L  L  L L NN++ +
Sbjct: 152 NLALLDLSNNKISELPRELGNLKSLRKLLANQCHLTQIPKEIGELSQLYFLSLENNRITS 211

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LP EI   +     ++SL +H+N L +LP  I  L  L++LSL++N L 
Sbjct: 212 LPNEIGNCRL----IESLFIHDNLLESLPDRIGNLTLLTQLSLKNNQLT 256



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 95/178 (53%), Gaps = 3/178 (1%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           +  L +  N     P    + +NL  LDLSNN+I+ LP+ + N   L  L+A    LT  
Sbjct: 130 LSRLQIIQNEFDEIPPVIFELSNLALLDLSNNKISELPRELGNLKSLRKLLANQCHLT-- 187

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            +PK++  L  L   +L  N++   P +I +   ++ L++ +N L  +P  I  L  L  
Sbjct: 188 QIPKEIGELSQLYFLSLENNRITSLPNEIGNCRLIESLFIHDNLLESLPDRIGNLTLLTQ 247

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
           LSL  N LT +P + G+L  L AL +S+N++  LP ++  LK L+++  ++N +  +P
Sbjct: 248 LSLKNNQLTQLPLSIGNLTNLFALDISNNKITVLPDALCGLKQLETITAYSNPIELIP 305



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/160 (35%), Positives = 85/160 (53%), Gaps = 4/160 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  SL + +S+ + + + +LS  +L+ FP++I  +  L+YL L    +  +P EI KL  
Sbjct: 24  TYRSLEEALSSPQKVFILDLSWKKLDTFPLEICTLTNLEYLNLSYTFIPGLPPEIKKLKN 83

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L+L  N L  +P   G+L  LEAL L+ N L  LP+ +  L  L  L +  N+   +
Sbjct: 84  LKILNLAYNYLKTLPKEIGELSNLEALQLNANNLRELPSEMKYLTALSRLQIIQNEFDEI 143

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           P  I  L  L+     L L NNK+  LP E+  LK L +L
Sbjct: 144 PPVIFELSNLA----LLDLSNNKISELPRELGNLKSLRKL 179


>gi|148921661|gb|AAI46714.1| Zgc:152984 protein [Danio rerio]
          Length = 636

 Score =  103 bits (257), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/224 (33%), Positives = 112/224 (50%), Gaps = 7/224 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAE 116
           +  L L  N L   P +  K T L  LDL +N  T +P+ +     +  L    N LT  
Sbjct: 163 LQILELRENQLKMLPKSMHKLTQLERLDLGSNEFTEVPEVLEQLTGIRELWMDGNKLTF- 221

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            +P  +  LK L   ++S N +E    QI     L+ L L NN+L  +P  I  L KL  
Sbjct: 222 -VPGMIGALKQLSYLDVSKNNVEMVEEQISGCENLQDLLLSNNALTQLPGSIGSLKKLST 280

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L +  N L  +PDT G L  L+ L  S N++E+LP+SI     L++    +N L  +P E
Sbjct: 281 LKVDDNQLMYLPDTIGGLSHLDELDCSFNEIEALPSSIGQCVNLRTFAADHNLLAQMPPE 340

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           + +LK ++     L LH+NKL  LP E+  ++ L  ++L DN L
Sbjct: 341 MGSLKNVT----VLFLHSNKLENLPEEMGDMQKLKVINLSDNKL 380



 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 130/293 (44%), Gaps = 53/293 (18%)

Query: 23  SIKTLDFSYSSLD---------SETL------ATQIELLPNNDYNKKPENIDTLLLYH-- 65
           ++ TLD+S+ SL+          +TL      A QIE LP   +N +       LLY   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFSYEKTLEELYLDANQIEELPKQLFNCQ-------LLYRLS 75

Query: 66  ---NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-----------PLSTL----- 106
              N+L+  P   +   NLR LD+S N I   P+ I N            P+S L     
Sbjct: 76  LPDNDLTVLPPGIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPEGFT 135

Query: 107 ------IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                     N    E LP     L  L++  L  NQL+  P  +  +  L+ L LG+N 
Sbjct: 136 QLLSLSQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMHKLTQLERLDLGSNE 195

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
              VP  + +L  +  L + GN LT +P   G L QL  L +S N +E +   IS  + L
Sbjct: 196 FTEVPEVLEQLTGIRELWMDGNKLTFVPGMIGALKQLSYLDVSKNNVEMVEEQISGCENL 255

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           + LLL NN L  LP  I +LK    KL +L + +N+L  LP  I  L  L EL
Sbjct: 256 QDLLLSNNALTQLPGSIGSLK----KLSTLKVDDNQLMYLPDTIGGLSHLDEL 304



 Score = 78.6 bits (192), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 3/169 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           NN+    +  S   NL+ L LSNN +T LP +I +   LSTL   +N L    LP  +  
Sbjct: 240 NNVEMVEEQISGCENLQDLLLSNNALTQLPGSIGSLKKLSTLKVDDNQLMY--LPDTIGG 297

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L +L   + S N++E  P  I     L+     +N L  +P E+  L  + VL L  N L
Sbjct: 298 LSHLDELDCSFNEIEALPSSIGQCVNLRTFAADHNLLAQMPPEMGSLKNVTVLFLHSNKL 357

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
            ++P+  GD+ +L+ + LSDN+L +LP S + L  + ++ L  N+ + L
Sbjct: 358 ENLPEEMGDMQKLKVINLSDNKLRNLPYSFTKLNQMTAMWLSENQSKPL 406



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 15/229 (6%)

Query: 41  TQIELL--PNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRIT 92
           TQ+E L   +N++ + PE       I  L +  N L+F P        L  LD+S N + 
Sbjct: 184 TQLERLDLGSNEFTEVPEVLEQLTGIRELWMDGNKLTFVPGMIGALKQLSYLDVSKNNVE 243

Query: 93  HLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
            + + I+    L  L+  NN LT   LP  + +LK L    +  NQL   P  I  +  L
Sbjct: 244 MVEEQISGCENLQDLLLSNNALT--QLPGSIGSLKKLSTLKVDDNQLMYLPDTIGGLSHL 301

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
             L    N +  +P  I +   L   +   N L  +P   G L  +  L L  N+LE+LP
Sbjct: 302 DELDCSFNEIEALPSSIGQCVNLRTFAADHNLLAQMPPEMGSLKNVTVLFLHSNKLENLP 361

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
             + +++ LK + L +NKLR LP     L     ++ ++ L  N+ + L
Sbjct: 362 EEMGDMQKLKVINLSDNKLRNLPYSFTKLN----QMTAMWLSENQSKPL 406


>gi|260812954|ref|XP_002601185.1| hypothetical protein BRAFLDRAFT_214496 [Branchiostoma floridae]
 gi|229286476|gb|EEN57197.1| hypothetical protein BRAFLDRAFT_214496 [Branchiostoma floridae]
          Length = 871

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/267 (31%), Positives = 123/267 (46%), Gaps = 41/267 (15%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP------------- 102
           ENI  L L   N+   P    K T L  LD+S N   HLP  ++                
Sbjct: 73  ENIKVLRLRGCNIMTVPSAVLKLTQLEELDISGNYRIHLPDGLSGLTNIRVLNLEGTGMG 132

Query: 103 -LSTLIARNNLLTA--------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKY 153
            +S ++ R   L          ++LP ++  L N+K  +LS  QL   P ++  +  L++
Sbjct: 133 IVSLVLGRLTQLEWLDLSFNLLQTLPPEVGQLTNVKHLDLSRCQLHILPPEVGRMTQLEW 192

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           L L  N L  +P E+ +L  L  L L  N L  +P   G L  LE L LS N L++LPA 
Sbjct: 193 LDLSFNPLQTLPPEVGQLTNLEWLGLSSNPLQTLPAEVGQLTNLEWLGLSSNPLQTLPAE 252

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLK----- 268
           +  L  +K L +   +LRTLP E+  L     +LK L L +N+L+TLP E+  L      
Sbjct: 253 VGQLTNVKHLDMSRCQLRTLPPEVGRLT----QLKWLGLTSNQLQTLPAEVGQLSRPYHL 308

Query: 269 -CLSELSLRDNPLVIRFVSDMTYKPPS 294
             L ++ +  NPL+         KPP+
Sbjct: 309 DVLCDIDVAGNPLI---------KPPA 326



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 73/226 (32%), Positives = 109/226 (48%), Gaps = 9/226 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPL--STLIARNNLLT 114
            ++ L L +N     PD  S   NL +LDL N  +  LP  +       S  ++ N  + 
Sbjct: 5   QLEKLYLGNNETITLPDEMSGLVNLTTLDLDNCGLESLPPVVLKLSHVHSLDLSHNEQI- 63

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLP ++  L+N+KV  L G  +   P  +L +  L+ L +  N   H+P  ++ L  +
Sbjct: 64  --SLPDELCRLENIKVLRLRGCNIMTVPSAVLKLTQLEELDISGNYRIHLPDGLSGLTNI 121

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL+L G  +  +    G L QLE L LS N L++LP  +  L  +K L L   +L  LP
Sbjct: 122 RVLNLEGTGMGIVSLVLGRLTQLEWLDLSFNLLQTLPPEVGQLTNVKHLDLSRCQLHILP 181

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            E+  +     +L+ L L  N L+TLP E+  L  L  L L  NPL
Sbjct: 182 PEVGRMT----QLEWLDLSFNPLQTLPPEVGQLTNLEWLGLSSNPL 223


>gi|428210576|ref|YP_007083720.1| Leucine Rich Repeat (LRR)-containing protein [Oscillatoria
           acuminata PCC 6304]
 gi|427998957|gb|AFY79800.1| Leucine Rich Repeat (LRR)-containing protein [Oscillatoria
           acuminata PCC 6304]
          Length = 298

 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/218 (38%), Positives = 107/218 (49%), Gaps = 7/218 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           LY+N LS  P    + ++L  L+L +N++  LP  I     L+ L    N L    LP +
Sbjct: 46  LYNNQLSALPSEIGQLSHLTRLNLGDNQLKVLPPEIWQLSNLTELDLWGNQLKV--LPPE 103

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L NL   +L  NQL   P +I  +  LK   L  N L+ +P EI +L  L  L L  
Sbjct: 104 IWQLSNLTELDLQDNQLSALPSEIWQLFNLKEFNLVGNQLSVLPPEIGQLSNLTKLYLQN 163

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N LT +P   G L  L  L L DNQL  LP  I  L  L  L L NN+L  LP EI  L 
Sbjct: 164 NQLTVLPPEIGQLSNLTKLYLQDNQLTVLPPEIGELSNLTELYLQNNQLSVLPPEIGNLT 223

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
            L E    L L  N+L  LP EI  L+ L+ + L +NP
Sbjct: 224 HLIE----LNLVGNELSALPPEIGHLRMLAAIILEENP 257



 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/226 (37%), Positives = 113/226 (50%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E + +L L    L+       + T L  LDL NN+++ LP  I     L+ L   +N L 
Sbjct: 16  EQVTSLNLSGKGLTTLASEIRQLTKLTRLDLYNNQLSALPSEIGQLSHLTRLNLGDNQLK 75

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP ++  L NL   +L GNQL+  P +I  +  L  L L +N L+ +P EI +L  L
Sbjct: 76  V--LPPEIWQLSNLTELDLWGNQLKVLPPEIWQLSNLTELDLQDNQLSALPSEIWQLFNL 133

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
              +L GN L+ +P   G L  L  L L +NQL  LP  I  L  L  L L +N+L  LP
Sbjct: 134 KEFNLVGNQLSVLPPEIGQLSNLTKLYLQNNQLTVLPPEIGQLSNLTKLYLQDNQLTVLP 193

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  L  L+E    L L NN+L  LP EI  L  L EL+L  N L
Sbjct: 194 PEIGELSNLTE----LYLQNNQLSVLPPEIGNLTHLIELNLVGNEL 235



 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/214 (38%), Positives = 105/214 (49%), Gaps = 13/214 (6%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L  N L   P    + +NL  LDL  N++  LP  I     L+ L  ++N L+A  LP +
Sbjct: 69  LGDNQLKVLPPEIWQLSNLTELDLWGNQLKVLPPEIWQLSNLTELDLQDNQLSA--LPSE 126

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L NLK FNL GNQL   P +I  +  L  LYL NN L  +P EI +L  L  L L  
Sbjct: 127 IWQLFNLKEFNLVGNQLSVLPPEIGQLSNLTKLYLQNNQLTVLPPEIGQLSNLTKLYLQD 186

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N LT +P   G+L  L  L L +NQL  LP  I NL  L  L L  N+L  LP EI  L+
Sbjct: 187 NQLTVLPPEIGELSNLTELYLQNNQLSVLPPEIGNLTHLIELNLVGNELSALPPEIGHLR 246

Query: 242 CLSEKL----------KSLLLHNNKLRTLPTEII 265
            L+  +            L L  N L + P EI+
Sbjct: 247 MLAAIILEENPEEWWYDGLYLGGNPLTSPPPEIL 280



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/201 (37%), Positives = 101/201 (50%), Gaps = 7/201 (3%)

Query: 83  SLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           SL+LS   +T L   I     L+ L   NN L+A  LP ++  L +L   NL  NQL+  
Sbjct: 20  SLNLSGKGLTTLASEIRQLTKLTRLDLYNNQLSA--LPSEIGQLSHLTRLNLGDNQLKVL 77

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P +I  +  L  L L  N L  +P EI +L  L  L L  N L+ +P     L+ L+   
Sbjct: 78  PPEIWQLSNLTELDLWGNQLKVLPPEIWQLSNLTELDLQDNQLSALPSEIWQLFNLKEFN 137

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           L  NQL  LP  I  L  L  L L NN+L  LP EI  L  L++    L L +N+L  LP
Sbjct: 138 LVGNQLSVLPPEIGQLSNLTKLYLQNNQLTVLPPEIGQLSNLTK----LYLQDNQLTVLP 193

Query: 262 TEIITLKCLSELSLRDNPLVI 282
            EI  L  L+EL L++N L +
Sbjct: 194 PEIGELSNLTELYLQNNQLSV 214



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 68/191 (35%), Positives = 87/191 (45%), Gaps = 27/191 (14%)

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NLSG  L     +I  +  L  L L NN L+ +P EI +L  L  L+LG N L  +P  
Sbjct: 21  LNLSGKGLTTLASEIRQLTKLTRLDLYNNQLSALPSEIGQLSHLTRLNLGDNQLKVLPPE 80

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE----- 245
              L  L  L L  NQL+ LP  I  L  L  L L +N+L  LP+EI  L  L E     
Sbjct: 81  IWQLSNLTELDLWGNQLKVLPPEIWQLSNLTELDLQDNQLSALPSEIWQLFNLKEFNLVG 140

Query: 246 --------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYK 291
                          L  L L NN+L  LP EI  L  L++L L+DN         +T  
Sbjct: 141 NQLSVLPPEIGQLSNLTKLYLQNNQLTVLPPEIGQLSNLTKLYLQDN--------QLTVL 192

Query: 292 PPSLLELASRT 302
           PP + EL++ T
Sbjct: 193 PPEIGELSNLT 203



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 60/129 (46%), Gaps = 17/129 (13%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L +N L+  P    + +NL  L L +N++T LP  I     L+ L  +NN L+ 
Sbjct: 155 NLTKLYLQNNQLTVLPPEIGQLSNLTKLYLQDNQLTVLPPEIGELSNLTELYLQNNQLSV 214

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKY--------------LYLGNNSL 161
             LP ++ NL +L   NL GN+L   P +I  +  L                LYLG N L
Sbjct: 215 --LPPEIGNLTHLIELNLVGNELSALPPEIGHLRMLAAIILEENPEEWWYDGLYLGGNPL 272

Query: 162 NHVPREINK 170
              P EI K
Sbjct: 273 TSPPPEILK 281



 Score = 45.1 bits (105), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 39/107 (36%), Positives = 56/107 (52%), Gaps = 12/107 (11%)

Query: 196 QLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNN 255
           Q+ +L LS   L +L + I  L  L  L L+NN+L  LP+EI  L  L+     L L +N
Sbjct: 17  QVTSLNLSGKGLTTLASEIRQLTKLTRLDLYNNQLSALPSEIGQLSHLTR----LNLGDN 72

Query: 256 KLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRT 302
           +L+ LP EI  L  L+EL L  N L +         PP + +L++ T
Sbjct: 73  QLKVLPPEIWQLSNLTELDLWGNQLKVL--------PPEIWQLSNLT 111


>gi|89271872|emb|CAJ81921.1| erbb2 interacting protein [Xenopus (Silurana) tropicalis]
          Length = 504

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/224 (33%), Positives = 113/224 (50%), Gaps = 7/224 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           +  L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT  
Sbjct: 163 LQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTY- 221

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            +P  + NLK L   ++S N +E     I    +L+ L L +N++  +P  I  L KL  
Sbjct: 222 -IPGFLGNLKQLTYLDVSKNNIEMVEDGISGCESLQDLLLSSNAIQQLPESIGALKKLTT 280

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L +  N L  +PD+ G L  +E L  S N++E+LP+SI +L  +++    +N L  LP E
Sbjct: 281 LKVDENQLMYLPDSIGGLTAIEDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPPE 340

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I T K  +     L LH+NKL +LP E+  ++ L  ++L DN L
Sbjct: 341 IGTWKSAT----VLFLHSNKLESLPEEMGDMQKLKVINLSDNRL 380



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 86/288 (29%), Positives = 133/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ +LD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTSLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTILPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    + LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLDFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    + GN LT IP   G+L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDGNKLTYIPGFLGNLKQLTYLDVSKNNIEMVEDGISGCESLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N ++ LP  I  LK    KL +L +  N+L  LP  I  L  + +L
Sbjct: 261 SSNAIQQLPESIGALK----KLTTLKVDENQLMYLPDSIGGLTAIEDL 304



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 62/229 (27%), Positives = 106/229 (46%), Gaps = 15/229 (6%)

Query: 41  TQIELL--PNNDYNKKPENIDTL------LLYHNNLSFFPDNASKFTNLRSLDLSNNRIT 92
           TQ+E L   +N++ + PE ++ L       +  N L++ P        L  LD+S N I 
Sbjct: 184 TQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNKLTYIPGFLGNLKQLTYLDVSKNNIE 243

Query: 93  HLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
            +   I+    L  L+  +N +  + LP+ +  LK L    +  NQL   P  I  +  +
Sbjct: 244 MVEDGISGCESLQDLLLSSNAI--QQLPESIGALKKLTTLKVDENQLMYLPDSIGGLTAI 301

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           + L    N +  +P  I  L ++   +   N LT +P   G       L L  N+LESLP
Sbjct: 302 EDLDCSFNEIEALPSSIGHLIQIRTFAADHNFLTQLPPEIGTWKSATVLFLHSNKLESLP 361

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
             + +++ LK + L +N+LR LP     L    ++L ++ L +N+ + L
Sbjct: 362 EEMGDMQKLKVINLSDNRLRNLPFSFTRL----QQLTAMWLSDNQSKPL 406


>gi|357625551|gb|EHJ75953.1| putative Erbb2 interacting protein isoform 2 [Danaus plexippus]
          Length = 722

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 104/315 (33%), Positives = 141/315 (44%), Gaps = 70/315 (22%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLL--- 113
           N+  L L  N L+  PDN     NL  LDLS N +  LP+ ITN     LIA  +L    
Sbjct: 85  NLQHLNLSRNTLASIPDNMKSLKNLMFLDLSVNPLEKLPETITN-----LIAMQDLYLND 139

Query: 114 -TAESLPKDMSNLKNLKVFNL-----------------------SGNQLEQFPIQILDIP 149
              E LP +   L NL++  L                         N+ +QFP  I    
Sbjct: 140 TYLEYLPGNFGRLANLRILELRDNYLMILPKSLSRSTDLLRLDIGQNEFQQFPEVIGRFS 199

Query: 150 TLKYLYLGNNSLNHVPR-----------------------EINKLCKLHVLSLGGNSLTD 186
            LK L++ +NS   +P                        EI    +L  L+L  NSLT 
Sbjct: 200 KLKELWIDSNSFTIIPAVIKPLDNLIHLEASNNMIEELAPEIGYCSRLEDLTLSVNSLTQ 259

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +PDT G L  L AL L +N+L S+P SI  LK L+ L+L +N +  LP+ I  L+    K
Sbjct: 260 LPDTIGQLSNLTALKLDNNRLYSIPESIGQLKNLEELMLMSNYIDKLPSSIGLLR----K 315

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELAS-RTLKV 305
           L+ L +  N LR +P EI +   LS LS+R N L        T  PP +  L S R L +
Sbjct: 316 LQYLNVDENMLRVIPPEIGSCAKLSVLSVRSNKL--------TKIPPEIGHLTSLRVLNL 367

Query: 306 HEIDYSQEHLPQNLV 320
             +  S  +LPQ+L+
Sbjct: 368 --VRNSLSYLPQSLL 380



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 69/226 (30%), Positives = 107/226 (47%), Gaps = 9/226 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLTA 115
           ++TLL   N ++  P        L+ LDLS+N +  +P AI++   L  L ++RN L   
Sbjct: 40  LETLLCQSNRITELPRQLFMCHGLKYLDLSDNELQAIPTAISSLVNLQHLNLSRNTL--- 96

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            S+P +M +LKNL   +LS N LE+ P  I ++  ++ LYL +  L ++P    +L  L 
Sbjct: 97  ASIPDNMKSLKNLMFLDLSVNPLEKLPETITNLIAMQDLYLNDTYLEYLPGNFGRLANLR 156

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L L  N L  +P +      L  L +  N+ +  P  I     LK L + +N    +P 
Sbjct: 157 ILELRDNYLMILPKSLSRSTDLLRLDIGQNEFQQFPEVIGRFSKLKELWIDSNSFTIIPA 216

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            I  L    + L  L   NN +  L  EI     L +L+L  N L 
Sbjct: 217 VIKPL----DNLIHLEASNNMIEELAPEIGYCSRLEDLTLSVNSLT 258



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/190 (32%), Positives = 86/190 (45%), Gaps = 27/190 (14%)

Query: 44  ELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPL 103
           EL P   Y  +   ++ L L  N+L+  PD   + +NL +L L NNR+  +P++I     
Sbjct: 236 ELAPEIGYCSR---LEDLTLSVNSLTQLPDTIGQLSNLTALKLDNNRLYSIPESI----- 287

Query: 104 STLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNH 163
                                LKNL+   L  N +++ P  I  +  L+YL +  N L  
Sbjct: 288 -------------------GQLKNLEELMLMSNYIDKLPSSIGLLRKLQYLNVDENMLRV 328

Query: 164 VPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL 223
           +P EI    KL VLS+  N LT IP   G L  L  L L  N L  LP S+ N   L +L
Sbjct: 329 IPPEIGSCAKLSVLSVRSNKLTKIPPEIGHLTSLRVLNLVRNSLSYLPQSLLNCDNLVAL 388

Query: 224 LLHNNKLRTL 233
            L  N+ + L
Sbjct: 389 WLSENQSKPL 398



 Score = 72.4 bits (176), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 96/201 (47%), Gaps = 8/201 (3%)

Query: 84  LDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           LD S++ +T +P  +  +   L TL+ ++N +T   LP+ +     LK  +LS N+L+  
Sbjct: 19  LDYSHHSLTDVPTEVFVYERTLETLLCQSNRIT--ELPRQLFMCHGLKYLDLSDNELQAI 76

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P  I  +  L++L L  N+L  +P  +  L  L  L L  N L  +P+T  +L  ++ L 
Sbjct: 77  PTAISSLVNLQHLNLSRNTLASIPDNMKSLKNLMFLDLSVNPLEKLPETITNLIAMQDLY 136

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           L+D  LE LP +   L  L+ L L +N L  LP  +      S  L  L +  N+ +  P
Sbjct: 137 LNDTYLEYLPGNFGRLANLRILELRDNYLMILPKSL----SRSTDLLRLDIGQNEFQQFP 192

Query: 262 TEIITLKCLSELSLRDNPLVI 282
             I     L EL +  N   I
Sbjct: 193 EVIGRFSKLKELWIDSNSFTI 213


>gi|124003508|ref|ZP_01688357.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123991077|gb|EAY30529.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 646

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/228 (38%), Positives = 121/228 (53%), Gaps = 7/228 (3%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           PE++  L +  + L+  P+N S+  NL+ L+L ++ +  LP  I     L+ L  R N L
Sbjct: 176 PESLRILHMNDHLLTTLPENFSQLHNLKVLNLKSSGLVALPNNIGQLKNLTILNLRENYL 235

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   LP  +  LK+L+  +L GNQL   PI I  + +LK L LG N L  +P  I +L  
Sbjct: 236 T--KLPTSIGQLKSLEKLDLQGNQLTILPISIGQLKSLKKLDLGANQLTTLPTSIGQLKN 293

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N+LT + D  G L QL+ L L  N+L +LP SI  LK L+ L L +NKL  L
Sbjct: 294 LQQLFLEVNTLTSLLDDIGKLKQLKVLNLRRNRLTTLPNSIGRLKSLRWLSLSSNKLTRL 353

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P     LK    KL+ L L  N  +T+ T +  LK L +L L  N L 
Sbjct: 354 PKSFGQLK----KLEELNLEGNYFQTMLTILGQLKSLKKLYLASNNLT 397



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 86/250 (34%), Positives = 125/250 (50%), Gaps = 28/250 (11%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT------------NFPL 103
           +N+  L L +N L+  P + +K  NL  L+L+ N+ T LP ++T            N  L
Sbjct: 60  KNLKKLNLEYNQLTTLPASFAKLQNLEELNLTRNKFTTLPASVTKLQNLEELNLTDNLSL 119

Query: 104 STL---------IARNNL---LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
             L         + + NL   L+ + LP++++ LK LKV NL+G+     P  I    +L
Sbjct: 120 KKLPDNIEQLKNLQKLNLTSNLSLKKLPENITQLKKLKVLNLNGSSRIILPANIQLPESL 179

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           + L++ ++ L  +P   ++L  L VL+L  + L  +P+  G L  L  L L +N L  LP
Sbjct: 180 RILHMNDHLLTTLPENFSQLHNLKVLNLKSSGLVALPNNIGQLKNLTILNLRENYLTKLP 239

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
            SI  LK L+ L L  N+L  LP  I  LK     LK L L  N+L TLPT I  LK L 
Sbjct: 240 TSIGQLKSLEKLDLQGNQLTILPISIGQLKS----LKKLDLGANQLTTLPTSIGQLKNLQ 295

Query: 272 ELSLRDNPLV 281
           +L L  N L 
Sbjct: 296 QLFLEVNTLT 305



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/216 (35%), Positives = 109/216 (50%), Gaps = 14/216 (6%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
           S+K LD   + L   TL T I  L         +N+  L L  N L+   D+  K   L+
Sbjct: 270 SLKKLDLGANQLT--TLPTSIGQL---------KNLQQLFLEVNTLTSLLDDIGKLKQLK 318

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
            L+L  NR+T LP +I     L  L   +N LT   LPK    LK L+  NL GN  +  
Sbjct: 319 VLNLRRNRLTTLPNSIGRLKSLRWLSLSSNKLT--RLPKSFGQLKKLEELNLEGNYFQTM 376

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
              +  + +LK LYL +N+L  +P  I +L +L  L+L  N L  +P++ G L +L+ L 
Sbjct: 377 LTILGQLKSLKKLYLASNNLTTLPENIGQLPELQYLTLVRNKLDRLPESIGQLQELQYLD 436

Query: 202 LSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
           L  N+L +LP S+  LK L+ L +  N L TLP  I
Sbjct: 437 LRRNRLSTLPESLGQLKKLEELNIGANPLVTLPNSI 472



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 84/250 (33%), Positives = 125/250 (50%), Gaps = 31/250 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +++  L L  NNL+  P+N  +   L+ L L  N++  LP++I     L  L  R N L+
Sbjct: 384 KSLKKLYLASNNLTTLPENIGQLPELQYLTLVRNKLDRLPESIGQLQELQYLDLRRNRLS 443

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFP------------------------IQILDIPT 150
             +LP+ +  LK L+  N+  N L   P                          I  I +
Sbjct: 444 --TLPESLGQLKKLEELNIGANPLVTLPNSIGKLKNLKKLYLATANQTPKSFASITQITS 501

Query: 151 LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           L+ LYL  N L+ +P  I KL  L  L+L  N ++ +P++ G L  L+ALIL +N+L  L
Sbjct: 502 LEELYLLVNRLDTLPTSIQKLKNLKKLNLLYNQISIVPESIGKLKNLQALILGNNKLTVL 561

Query: 211 PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
             +I  L+ +  L L +NKL TLP  I  LK L +   S   +NN L++LP  I  LK L
Sbjct: 562 TQNIGQLESILRLDLSSNKLTTLPQSIGKLKKLKQLNLS---YNN-LKSLPEHIGQLKNL 617

Query: 271 SELSLRDNPL 280
            +L+LR NP+
Sbjct: 618 KDLNLRKNPI 627



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/198 (33%), Positives = 96/198 (48%), Gaps = 20/198 (10%)

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           L L +N L  +P  I +L  L  L+L  N LT +P +F  L  LE L L+ N+  +LPAS
Sbjct: 42  LNLEHNQLTTLPANIGELKNLKKLNLEYNQLTTLPASFAKLQNLEELNLTRNKFTTLPAS 101

Query: 214 ISNLKMLKSLLLHNN-KLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSE 272
           ++ L+ L+ L L +N  L+ LP  I  LK L +KL   L  N  L+ LP  I  LK L  
Sbjct: 102 VTKLQNLEELNLTDNLSLKKLPDNIEQLKNL-QKLN--LTSNLSLKKLPENITQLKKLKV 158

Query: 273 LSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHH--CV 330
           L+L  +  +I          P+ ++L      +H  D+    LP+N  Q     H+   +
Sbjct: 159 LNLNGSSRIIL---------PANIQLPESLRILHMNDHLLTTLPENFSQL----HNLKVL 205

Query: 331 NPKCKG-VFFDNRIEHIK 347
           N K  G V   N I  +K
Sbjct: 206 NLKSSGLVALPNNIGQLK 223



 Score = 51.6 bits (122), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 72/245 (29%), Positives = 104/245 (42%), Gaps = 52/245 (21%)

Query: 46  LPNNDYNKKPENIDTL------LLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+    PENI  L       L  N L   P++  +   L+ LDL  NR++ LP+++ 
Sbjct: 391 LASNNLTTLPENIGQLPELQYLTLVRNKLDRLPESIGQLQELQYLDLRRNRLSTLPESLG 450

Query: 100 NF-----------PLSTL---------IARNNLLTAESLPKD---MSNLKNLKVFNLSGN 136
                        PL TL         + +  L TA   PK    ++ + +L+   L  N
Sbjct: 451 QLKKLEELNIGANPLVTLPNSIGKLKNLKKLYLATANQTPKSFASITQITSLEELYLLVN 510

Query: 137 QLEQFPI----------------QILDIP-------TLKYLYLGNNSLNHVPREINKLCK 173
           +L+  P                 QI  +P        L+ L LGNN L  + + I +L  
Sbjct: 511 RLDTLPTSIQKLKNLKKLNLLYNQISIVPESIGKLKNLQALILGNNKLTVLTQNIGQLES 570

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           +  L L  N LT +P + G L +L+ L LS N L+SLP  I  LK LK L L  N +   
Sbjct: 571 ILRLDLSSNKLTTLPQSIGKLKKLKQLNLSYNNLKSLPEHIGQLKNLKDLNLRKNPISAT 630

Query: 234 PTEII 238
             E I
Sbjct: 631 EKEKI 635


>gi|198424668|ref|XP_002131394.1| PREDICTED: similar to scribbled CG5462-PH [Ciona intestinalis]
          Length = 1555

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 122/239 (51%), Gaps = 11/239 (4%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  K P +I   +      +  N+++  P+N     +L  LD+S N +T LP  I 
Sbjct: 71  LSDNELQKIPADIAQFVYLVDLNISRNDIAELPENIKFCKSLEVLDISGNPLTKLPDGIC 130

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                  +  N++ +   +P+D+ NL  L+      N L+  P  +  I  L+ L LGNN
Sbjct: 131 QLVCMKHLNLNDI-SLIRMPQDIGNLSKLQTMECRENLLQSIPYTLCSIGGLEQLDLGNN 189

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L  +P  +++L  L  L L GN LT +PD+ G L+ +  + LS+N+LES+P +I +L  
Sbjct: 190 ELESLPDSLSELTNLRDLWLDGNHLTSLPDSIGKLHNIVCMDLSENKLESVPETIGDLHS 249

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           +  L L +N +  LP  I  LK LS     L +  N++  LP+ I     ++EL L +N
Sbjct: 250 ITDLTLSHNFIDALPESIGKLKTLS----ILKVDQNRISKLPSSIGDWPNITELMLTEN 304



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 116/223 (52%), Gaps = 9/223 (4%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTA 115
           ++ LLL  N +   P    +   LR L LS+N +  +P  I  F   +   I+RN++   
Sbjct: 43  LEELLLDANQIKDLPKQFFRLVKLRKLGLSDNELQKIPADIAQFVYLVDLNISRNDIA-- 100

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++   K+L+V ++SGN L + P  I  +  +K+L L + SL  +P++I  L KL 
Sbjct: 101 -ELPENIKFCKSLEVLDISGNPLTKLPDGICQLVCMKHLNLNDISLIRMPQDIGNLSKLQ 159

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            +    N L  IP T   +  LE L L +N+LESLP S+S L  L+ L L  N L +LP 
Sbjct: 160 TMECRENLLQSIPYTLCSIGGLEQLDLGNNELESLPDSLSELTNLRDLWLDGNHLTSLPD 219

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            I  L      +  + L  NKL ++P  I  L  +++L+L  N
Sbjct: 220 SIGKL----HNIVCMDLSENKLESVPETIGDLHSITDLTLSHN 258



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 75/224 (33%), Positives = 113/224 (50%), Gaps = 7/224 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           + T+    N L   P        L  LDL NN +  LP +++    L  L    N LT  
Sbjct: 158 LQTMECRENLLQSIPYTLCSIGGLEQLDLGNNELESLPDSLSELTNLRDLWLDGNHLT-- 215

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           SLP  +  L N+   +LS N+LE  P  I D+ ++  L L +N ++ +P  I KL  L +
Sbjct: 216 SLPDSIGKLHNIVCMDLSENKLESVPETIGDLHSITDLTLSHNFIDALPESIGKLKTLSI 275

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L +  N ++ +P + GD   +  L+L++N L  LPASI NL+ + +L +  N+L  LP E
Sbjct: 276 LKVDQNRISKLPSSIGDWPNITELMLTENLLTELPASIGNLQKMTTLNVDRNQLEVLPPE 335

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +   KC S  L  L + +N L  LPTE+     L  L++  N L
Sbjct: 336 L--GKCSS--LNILSVRDNMLTYLPTELGNATNLRVLNVSGNRL 375



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/205 (30%), Positives = 101/205 (49%), Gaps = 8/205 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+  L L  N+L+  PD+  K  N+  +DLS N++  +P+ I +   ++ L   +N + A
Sbjct: 203 NLRDLWLDGNHLTSLPDSIGKLHNIVCMDLSENKLESVPETIGDLHSITDLTLSHNFIDA 262

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+ +  LK L +  +  N++ + P  I D P +  L L  N L  +P  I  L K+ 
Sbjct: 263 --LPESIGKLKTLSILKVDQNRISKLPSSIGDWPNITELMLTENLLTELPASIGNLQKMT 320

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L++  N L  +P   G    L  L + DN L  LP  + N   L+ L +  N+L  LP 
Sbjct: 321 TLNVDRNQLEVLPPELGKCSSLNILSVRDNMLTYLPTELGNATNLRVLNVSGNRLDCLPI 380

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTL 260
            + +L     KLK+L L  N+ + L
Sbjct: 381 SLASL-----KLKALWLSENQSQPL 400



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 81/165 (49%), Gaps = 6/165 (3%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK-LHV 176
           LPK    L  L+   LS N+L++ P  I     L  L +  N +  +P  I K CK L V
Sbjct: 56  LPKQFFRLVKLRKLGLSDNELQKIPADIAQFVYLVDLNISRNDIAELPENI-KFCKSLEV 114

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L + GN LT +PD    L  ++ L L+D  L  +P  I NL  L+++    N L+++P  
Sbjct: 115 LDISGNPLTKLPDGICQLVCMKHLNLNDISLIRMPQDIGNLSKLQTMECRENLLQSIPYT 174

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +    C    L+ L L NN+L +LP  +  L  L +L L  N L 
Sbjct: 175 L----CSIGGLEQLDLGNNELESLPDSLSELTNLRDLWLDGNHLT 215


>gi|348578535|ref|XP_003475038.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1-like [Cavia porcellus]
          Length = 871

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 118/225 (52%), Gaps = 10/225 (4%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L  N L  F D+     NL+ L+L  N+I  +P +I+N   L  LI  +N    E  P
Sbjct: 528 LELNENKLLVFADHLCSLMNLKFLNLGKNQIEKIPPSISNMISLHVLILCSNKF--EIFP 585

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
           K++  L+NL+V +LS NQL+  P +I ++  ++ L   +N     P E+ +L  L  L +
Sbjct: 586 KELCTLENLQVLDLSENQLQTIPSEIRNLKGVQKLNFSSNQFTRFPTELCQLQSLEELDI 645

Query: 180 G---GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
               G  LT +P+   ++ QL+ L +S+N +  +P +I  L+ L S    NN++  LP  
Sbjct: 646 SQANGTKLTRLPEELSNMTQLKKLDISNNAIREIPTNIGELRSLVSFYACNNQISYLPPS 705

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            +TLK    +L+ L L  N L  LP+ I  L  L E+   DNPL+
Sbjct: 706 FLTLK----ELQQLNLSGNNLTALPSAIHNLVSLKEIKFDDNPLL 746



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 87/298 (29%), Positives = 133/298 (44%), Gaps = 56/298 (18%)

Query: 46  LPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN----- 100
           LP N Y  K +N+  L +  N++    ++ S  TN+ SL+ S N I ++P  I N     
Sbjct: 423 LPKNIY--KLKNLRKLHVNRNSIVGITEDISHLTNICSLEFSGNMIKNVPIEIKNCRKLT 480

Query: 101 -----------FPLSTLIARNNLL-------TAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
                      FP+  L A ++L        +   +P D+S  K L    L+ N+L  F 
Sbjct: 481 KVELNYNKILQFPVG-LCALDSLYYLSFNGNSISQIPADVSFSKQLLHLELNENKLLVFA 539

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
             +  +  LK+L LG N +  +P  I+ +  LHVL L  N     P     L  L+ L L
Sbjct: 540 DHLCSLMNLKFLNLGKNQIEKIPPSISNMISLHVLILCSNKFEIFPKELCTLENLQVLDL 599

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE----------------- 245
           S+NQL+++P+ I NLK ++ L   +N+    PTE+  L+ L E                 
Sbjct: 600 SENQLQTIPSEIRNLKGVQKLNFSSNQFTRFPTELCQLQSLEELDISQANGTKLTRLPEE 659

Query: 246 -----KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLEL 298
                +LK L + NN +R +PT I  L+ L      +N         ++Y PPS L L
Sbjct: 660 LSNMTQLKKLDISNNAIREIPTNIGELRSLVSFYACNN--------QISYLPPSFLTL 709



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 72/224 (32%), Positives = 115/224 (51%), Gaps = 18/224 (8%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQ----AITNFPLSTLIARNNLLTAESLPK 120
           HN +S  P       N+R L L++N I + P     ++ N  +   +++N L     +P 
Sbjct: 232 HNQISHMPKEILHHENIRQLFLNDNYIENFPSPGVGSLRNLEILN-VSKNKL---RHIPD 287

Query: 121 DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
            + NL+NL++ ++  N+L  FP  +  +P L  L L  N +  +P+EI +L  L +L L 
Sbjct: 288 GLPNLQNLRILDMEYNKLTIFPKALCFLPKLISLNLVGNMIGSLPKEIRELKNLEILLLD 347

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI--- 237
            N LT +      L +++ L L+DN+LE +   I N K L+ L+L  N L+ +P  I   
Sbjct: 348 HNKLTFLAVEIFQLSKIKELKLADNKLEVISPKIENFKELRILILDKNLLKNIPERISYC 407

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           + L+CLS       L +NKL  LP  I  LK L +L +  N +V
Sbjct: 408 VMLECLS-------LSDNKLIDLPKNIYKLKNLRKLHVNRNSIV 444



 Score = 88.6 bits (218), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 116/226 (51%), Gaps = 7/226 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L +  N L   PD      NLR LD+  N++T  P+A+   P L +L    N++  
Sbjct: 271 NLEILNVSKNKLRHIPDGLPNLQNLRILDMEYNKLTIFPKALCFLPKLISLNLVGNMIG- 329

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            SLPK++  LKNL++  L  N+L    ++I  +  +K L L +N L  +  +I    +L 
Sbjct: 330 -SLPKEIRELKNLEILLLDHNKLTFLAVEIFQLSKIKELKLADNKLEVISPKIENFKELR 388

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L L  N L +IP+       LE L LSDN+L  LP +I  LK L+ L ++ N +  +  
Sbjct: 389 ILILDKNLLKNIPERISYCVMLECLSLSDNKLIDLPKNIYKLKNLRKLHVNRNSIVGITE 448

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +I  L  +     SL    N ++ +P EI   + L+++ L  N ++
Sbjct: 449 DISHLTNIC----SLEFSGNMIKNVPIEIKNCRKLTKVELNYNKIL 490



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 93/327 (28%), Positives = 142/327 (43%), Gaps = 88/327 (26%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +N++ LLL HN L+F      + + ++ L L++N++  +   I NF  L  LI   NLL 
Sbjct: 339 KNLEILLLDHNKLTFLAVEIFQLSKIKELKLADNKLEVISPKIENFKELRILILDKNLL- 397

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS-------------- 160
            +++P+ +S    L+  +LS N+L   P  I  +  L+ L++  NS              
Sbjct: 398 -KNIPERISYCVMLECLSLSDNKLIDLPKNIYKLKNLRKLHVNRNSIVGITEDISHLTNI 456

Query: 161 ---------LNHVPREI---NKLCK--------------------LHVLSLGGNSLTDIP 188
                    + +VP EI    KL K                    L+ LS  GNS++ IP
Sbjct: 457 CSLEFSGNMIKNVPIEIKNCRKLTKVELNYNKILQFPVGLCALDSLYYLSFNGNSISQIP 516

Query: 189 DTFGDLYQLEALILSDNQL-----------------------ESLPASISNLKMLKSLLL 225
                  QL  L L++N+L                       E +P SISN+  L  L+L
Sbjct: 517 ADVSFSKQLLHLELNENKLLVFADHLCSLMNLKFLNLGKNQIEKIPPSISNMISLHVLIL 576

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFV 285
            +NK    P E+ TL    E L+ L L  N+L+T+P+EI  LK + +L+   N    RF 
Sbjct: 577 CSNKFEIFPKELCTL----ENLQVLDLSENQLQTIPSEIRNLKGVQKLNFSSNQFT-RF- 630

Query: 286 SDMTYKPPSLLELASRTLKVHEIDYSQ 312
                 P  L +L S    + E+D SQ
Sbjct: 631 ------PTELCQLQS----LEELDISQ 647



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 94/188 (50%), Gaps = 6/188 (3%)

Query: 60  TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESL 118
            L+L  N    FP       NL+ LDLS N++  +P  I N   +  L   +N  T    
Sbjct: 573 VLILCSNKFEIFPKELCTLENLQVLDLSENQLQTIPSEIRNLKGVQKLNFSSNQFT--RF 630

Query: 119 PKDMSNLKNLKVFNLS---GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           P ++  L++L+  ++S   G +L + P ++ ++  LK L + NN++  +P  I +L  L 
Sbjct: 631 PTELCQLQSLEELDISQANGTKLTRLPEELSNMTQLKKLDISNNAIREIPTNIGELRSLV 690

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
                 N ++ +P +F  L +L+ L LS N L +LP++I NL  LK +   +N L   P 
Sbjct: 691 SFYACNNQISYLPPSFLTLKELQQLNLSGNNLTALPSAIHNLVSLKEIKFDDNPLLRPPM 750

Query: 236 EIITLKCL 243
           EI   K L
Sbjct: 751 EICEGKQL 758



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 109/247 (44%), Gaps = 28/247 (11%)

Query: 60  TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLP 119
           TL L    L  FP N  K   ++ L L NN+I    Q +                     
Sbjct: 157 TLHLEAKGLQEFPKNNLKVKYIKYLYLDNNKIKSF-QGV--------------------- 194

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            D+ +L  L++ ++  N+L   P +IL +  L+ L + +N ++H+P+EI     +  L L
Sbjct: 195 -DLDDLLGLEIISMQDNELSSLPHEILLLNNLRILDVSHNQISHMPKEILHHENIRQLFL 253

Query: 180 GGNSLTDIPD-TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
             N + + P    G L  LE L +S N+L  +P  + NL+ L+ L +  NKL   P  + 
Sbjct: 254 NDNYIENFPSPGVGSLRNLEILNVSKNKLRHIPDGLPNLQNLRILDMEYNKLTIFPKAL- 312

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLEL 298
              C   KL SL L  N + +LP EI  LK L  L L  N L    V          L+L
Sbjct: 313 ---CFLPKLISLNLVGNMIGSLPKEIRELKNLEILLLDHNKLTFLAVEIFQLSKIKELKL 369

Query: 299 ASRTLKV 305
           A   L+V
Sbjct: 370 ADNKLEV 376



 Score = 50.1 bits (118), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 57/112 (50%), Gaps = 3/112 (2%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLK 126
           L+  P+  S  T L+ LD+SNN I  +P  I     L +  A NN ++   LP     LK
Sbjct: 653 LTRLPEELSNMTQLKKLDISNNAIREIPTNIGELRSLVSFYACNNQISY--LPPSFLTLK 710

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
            L+  NLSGN L   P  I ++ +LK +   +N L   P EI +  +L+ ++
Sbjct: 711 ELQQLNLSGNNLTALPSAIHNLVSLKEIKFDDNPLLRPPMEICEGKQLYTIT 762


>gi|387016708|gb|AFJ50473.1| Leucine-rich repeat protein SHOC-2-like [Crotalus adamanteus]
          Length = 582

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/248 (30%), Positives = 133/248 (53%), Gaps = 25/248 (10%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N++TL L  N+L+  PD+      LR +DL +N++  +P  +     L+TL  R N +T 
Sbjct: 147 NLETLALSENSLTSLPDSLGNLKQLRMVDLRHNKLREIPPVVYRLTSLTTLYLRFNRIT- 205

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            S+ KD+ NL NL + ++  N+++Q P +I ++  L  L + +N L H+P+EI    ++ 
Sbjct: 206 -SVEKDIKNLSNLTMLSIRENKIKQLPAEIGELCNLITLDVAHNQLEHLPKEIGNCTQIT 264

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP- 234
            L L  N L D+PDT G+L  L++L L  N+L ++P +++    L  L L NN + TLP 
Sbjct: 265 KLDLQHNELLDLPDTIGNLSTLKSLGLRYNRLSAIPRTLAQCSKLDELNLENNIISTLPE 324

Query: 235 ---TEIITLKCLS-----------------EKLKSLLLHNNKLRTLPTEIIT-LKCLSEL 273
              + ++ L  L+                   + +L + +N++  +P  I +  K LS+L
Sbjct: 325 GLLSSLVNLTSLTLARNCFQSYPVGGPSQFSTIYALNMEHNRINKIPFGIFSRAKVLSKL 384

Query: 274 SLRDNPLV 281
           +++DN L 
Sbjct: 385 NMKDNQLT 392



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 95/275 (34%), Positives = 141/275 (51%), Gaps = 23/275 (8%)

Query: 23  SIKTLDFSYSSLDS--ETLATQIEL----LPNNDYNKKPE-------NIDTLLLYHNNLS 69
           ++K+L   Y+ L +   TLA   +L    L NN  +  PE       N+ +L L  N   
Sbjct: 285 TLKSLGLRYNRLSAIPRTLAQCSKLDELNLENNIISTLPEGLLSSLVNLTSLTLARNCFQ 344

Query: 70  FFP-DNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLK 126
            +P    S+F+ + +L++ +NRI  +P  I +    LS L  ++N LT  SLP D     
Sbjct: 345 SYPVGGPSQFSTIYALNMEHNRINKIPFGIFSRAKVLSKLNMKDNQLT--SLPLDFGTWT 402

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           ++   NL+ NQL + P  +  + +L+ L L NN L ++P  I  L KL  L L  N L  
Sbjct: 403 SMVELNLATNQLNKIPEDVSGLVSLEVLILSNNLLRNLPHGIGNLRKLRELDLEENKLES 462

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P+    L  L+ LIL++NQL +LP  I +L  L  L L  N L  LP EI TL    E 
Sbjct: 463 LPNEIAYLRDLQRLILTNNQLSTLPRGIGHLINLTHLGLGENFLTQLPEEIGTL----EN 518

Query: 247 LKSLLLHNN-KLRTLPTEIITLKCLSELSLRDNPL 280
           L+ L L++N  L +LP E+     LS +S+ + PL
Sbjct: 519 LEELYLNDNPHLNSLPFELALCSKLSIMSIENCPL 553



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 63/176 (35%), Positives = 96/176 (54%), Gaps = 4/176 (2%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSN 124
           N L+  P +   +T++  L+L+ N++  +P+ ++    L  LI  NNLL   +LP  + N
Sbjct: 389 NQLTSLPLDFGTWTSMVELNLATNQLNKIPEDVSGLVSLEVLILSNNLL--RNLPHGIGN 446

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L+ L+  +L  N+LE  P +I  +  L+ L L NN L+ +PR I  L  L  L LG N L
Sbjct: 447 LRKLRELDLEENKLESLPNEIAYLRDLQRLILTNNQLSTLPRGIGHLINLTHLGLGENFL 506

Query: 185 TDIPDTFGDLYQLEALILSDN-QLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
           T +P+  G L  LE L L+DN  L SLP  ++    L  + + N  L TLP +I+ 
Sbjct: 507 TQLPEEIGTLENLEELYLNDNPHLNSLPFELALCSKLSIMSIENCPLSTLPAQIVA 562



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/167 (33%), Positives = 89/167 (53%), Gaps = 15/167 (8%)

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           L L   S++ +P  + +L +L  L L GN L  +P   G L  LE L LS+N L SLP S
Sbjct: 105 LDLAKRSIHLLPSSVKELTQLTELYLYGNKLQSLPAEVGCLVNLETLALSENSLTSLPDS 164

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           + NLK L+ + L +NKLR +P  +  L  L+    +L L  N++ ++  +I  L  L+ L
Sbjct: 165 LGNLKQLRMVDLRHNKLREIPPVVYRLTSLT----TLYLRFNRITSVEKDIKNLSNLTML 220

Query: 274 SLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQ-EHLPQNL 319
           S+R+N         +   P  + EL +  L   ++ ++Q EHLP+ +
Sbjct: 221 SIREN--------KIKQLPAEIGELCN--LITLDVAHNQLEHLPKEI 257



 Score = 65.5 bits (158), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 4/150 (2%)

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            +L+   +   P  + ++  L  LYL  N L  +P E+  L  L  L+L  NSLT +PD+
Sbjct: 105 LDLAKRSIHLLPSSVKELTQLTELYLYGNKLQSLPAEVGCLVNLETLALSENSLTSLPDS 164

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
            G+L QL  + L  N+L  +P  +  L  L +L L  N++ ++  +I  L  L+     L
Sbjct: 165 LGNLKQLRMVDLRHNKLREIPPVVYRLTSLTTLYLRFNRITSVEKDIKNLSNLT----ML 220

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +  NK++ LP EI  L  L  L +  N L
Sbjct: 221 SIRENKIKQLPAEIGELCNLITLDVAHNQL 250



 Score = 65.1 bits (157), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/164 (32%), Positives = 82/164 (50%), Gaps = 4/164 (2%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LP  +  L  L    L GN+L+  P ++  +  L+ L L  NSL  +P  +  L +L ++
Sbjct: 115 LPSSVKELTQLTELYLYGNKLQSLPAEVGCLVNLETLALSENSLTSLPDSLGNLKQLRMV 174

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            L  N L +IP     L  L  L L  N++ S+   I NL  L  L +  NK++ LP EI
Sbjct: 175 DLRHNKLREIPPVVYRLTSLTTLYLRFNRITSVEKDIKNLSNLTMLSIRENKIKQLPAEI 234

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             L C    L +L + +N+L  LP EI     +++L L+ N L+
Sbjct: 235 GEL-C---NLITLDVAHNQLEHLPKEIGNCTQITKLDLQHNELL 274


>gi|110626183|ref|NP_001007176.1| protein scribble homolog [Danio rerio]
 gi|123904207|sp|Q4H4B6.1|SCRIB_DANRE RecName: Full=Protein scribble homolog; AltName: Full=Scribble1
 gi|71000206|dbj|BAE07162.1| scribble1 [Danio rerio]
          Length = 1724

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/256 (34%), Positives = 123/256 (48%), Gaps = 35/256 (13%)

Query: 51  YNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIA 108
           YN+   +++ LLL  N L   P    +  NLR L LS+N I  LP  + NF   +   I+
Sbjct: 34  YNR---SLEELLLDANQLRELPKPFFRLHNLRKLGLSDNEIQKLPPDVANFTQLVELDIS 90

Query: 109 RNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREI 168
           RN++     +P+++   ++L++ + SGN L + P     +  L +L L + SL  +P +I
Sbjct: 91  RNDI---SEIPENIKFCQSLEIADFSGNPLTRLPDGFTQLRGLAHLSLNDVSLQSLPNDI 147

Query: 169 NKL-----------------------CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDN 205
             L                        KL  L LG N L  +PDT G L  L  L L  N
Sbjct: 148 GNLSNLVTLELRENLLKSLPSSLSFLVKLEQLDLGSNVLEVLPDTLGALPNLRELWLDRN 207

Query: 206 QLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
           QL SLP  + NL+ L  L +  N+L  LPTEI  L  L++    LLL  N L  LP  I 
Sbjct: 208 QLSSLPPELGNLRQLVCLDVSENRLSELPTEISGLIALTD----LLLSENLLEILPDSIG 263

Query: 266 TLKCLSELSLRDNPLV 281
           +LK LS L +  N LV
Sbjct: 264 SLKKLSILKVNQNRLV 279



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 81/239 (33%), Positives = 121/239 (50%), Gaps = 9/239 (3%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP 102
           ++ LPN+  N    N+ TL L  N L   P + S    L  LDL +N +  LP  +   P
Sbjct: 140 LQSLPNDIGNLS--NLVTLELRENLLKSLPSSLSFLVKLEQLDLGSNVLEVLPDTLGALP 197

Query: 103 -LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L  L    N L+  SLP ++ NL+ L   ++S N+L + P +I  +  L  L L  N L
Sbjct: 198 NLRELWLDRNQLS--SLPPELGNLRQLVCLDVSENRLSELPTEISGLIALTDLLLSENLL 255

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +P  I  L KL +L +  N L  + D+ G+   L  L+L++N L+SLP S+  LK L 
Sbjct: 256 EILPDSIGSLKKLSILKVNQNRLVHLTDSIGECENLTELMLTENLLQSLPRSLGKLKKLT 315

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +L +  N+L ++P E+    C+S  L  L L +N+L  LP E+     L  L +  N L
Sbjct: 316 NLNVDRNRLSSVPAELGG--CVS--LNVLSLRDNRLGKLPPELANATELHVLDVAGNRL 370



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 84/260 (32%), Positives = 122/260 (46%), Gaps = 26/260 (10%)

Query: 46  LPNNDYNKKPENID------TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  K P ++        L +  N++S  P+N     +L   D S N +T LP   T
Sbjct: 66  LSDNEIQKLPPDVANFTQLVELDISRNDISEIPENIKFCQSLEIADFSGNPLTRLPDGFT 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                  ++ N++ + +SLP D+ NL NL    L  N L+  P  +  +  L+ L LG+N
Sbjct: 126 QLRGLAHLSLNDV-SLQSLPNDIGNLSNLVTLELRENLLKSLPSSLSFLVKLEQLDLGSN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L  +P  +  L  L  L L  N L+ +P   G+L QL  L +S+N+L  LP  IS L  
Sbjct: 185 VLEVLPDTLGALPNLRELWLDRNQLSSLPPELGNLRQLVCLDVSENRLSELPTEISGLIA 244

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTL 260
           L  LLL  N L  LP  I +LK LS                   E L  L+L  N L++L
Sbjct: 245 LTDLLLSENLLEILPDSIGSLKKLSILKVNQNRLVHLTDSIGECENLTELMLTENLLQSL 304

Query: 261 PTEIITLKCLSELSLRDNPL 280
           P  +  LK L+ L++  N L
Sbjct: 305 PRSLGKLKKLTNLNVDRNRL 324



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 66/201 (32%), Positives = 96/201 (47%), Gaps = 8/201 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+  L L  N LS  P        L  LD+S NR++ LP  I+    L+ L+   NLL  
Sbjct: 198 NLRELWLDRNQLSSLPPELGNLRQLVCLDVSENRLSELPTEISGLIALTDLLLSENLL-- 255

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           E LP  + +LK L +  ++ N+L      I +   L  L L  N L  +PR + KL KL 
Sbjct: 256 EILPDSIGSLKKLSILKVNQNRLVHLTDSIGECENLTELMLTENLLQSLPRSLGKLKKLT 315

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L++  N L+ +P   G    L  L L DN+L  LP  ++N   L  L +  N+L+ LP 
Sbjct: 316 NLNVDRNRLSSVPAELGGCVSLNVLSLRDNRLGKLPPELANATELHVLDVAGNRLQNLPF 375

Query: 236 EIITLKCLSEKLKSLLLHNNK 256
            +  L      LK++ L  N+
Sbjct: 376 ALANL-----NLKAMWLAENQ 391



 Score = 68.2 bits (165), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 67/204 (32%), Positives = 96/204 (47%), Gaps = 10/204 (4%)

Query: 80  NLRSLDLSNNRITHLPQAIT--NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ S+D  +  +T +P  I   N  L  L+   N L    LPK    L NL+   LS N+
Sbjct: 13  HVESVDKRHCSLTAVPDEIYRYNRSLEELLLDANQL--RELPKPFFRLHNLRKLGLSDNE 70

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK-LHVLSLGGNSLTDIPDTFGDLYQ 196
           +++ P  + +   L  L +  N ++ +P  I K C+ L +    GN LT +PD F  L  
Sbjct: 71  IQKLPPDVANFTQLVELDISRNDISEIPENI-KFCQSLEIADFSGNPLTRLPDGFTQLRG 129

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
           L  L L+D  L+SLP  I NL  L +L L  N L      + +      KL+ L L +N 
Sbjct: 130 LAHLSLNDVSLQSLPNDIGNLSNLVTLELRENLL----KSLPSSLSFLVKLEQLDLGSNV 185

Query: 257 LRTLPTEIITLKCLSELSLRDNPL 280
           L  LP  +  L  L EL L  N L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQL 209


>gi|375364744|ref|NP_001096732.2| leucine-rich repeat-containing protein 40 [Bos taurus]
 gi|358411512|ref|XP_003582049.1| PREDICTED: leucine-rich repeat-containing protein 40 [Bos taurus]
 gi|359064126|ref|XP_003585940.1| PREDICTED: leucine-rich repeat-containing protein 40 [Bos taurus]
          Length = 602

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/227 (39%), Positives = 126/227 (55%), Gaps = 15/227 (6%)

Query: 57  NIDTLLLYHNNLSFFPDNASKF----TNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           N+D     + NLSF   NAS+     T+L  L +SNN++  L   +   P L+ L   +N
Sbjct: 59  NVDIPEEANQNLSF---NASERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDN 115

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  SLP  +  L+NL+  N+S N+L+  P +I ++  LK LYL +N L  +P    +L
Sbjct: 116 QLT--SLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKGLYLQHNELTCIPEGFEQL 173

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L L  N LT +P +F  L  L  L LS NQL+SLPA +S +K LK L  ++N L 
Sbjct: 174 SNLEDLDLSNNRLTTVPASFSFLSSLMRLNLSSNQLKSLPAELSGMKRLKHLDCNSNLLE 233

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           T+P E+ ++    E L+ L L  NKLR LP E  + K L EL + +N
Sbjct: 234 TIPPELASM----ESLELLYLRRNKLRFLP-EFPSCKLLKELHVGEN 275



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/238 (34%), Positives = 116/238 (48%), Gaps = 37/238 (15%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           ++++LP    N +  N+  L L HN L+  P+   + +NL  LDLSNNR+T +P +   F
Sbjct: 139 KLKILPEEITNLR--NLKGLYLQHNELTCIPEGFEQLSNLEDLDLSNNRLTTVPAS---F 193

Query: 102 PLSTLIARNNLLTAE--SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
              + + R NL + +  SLP ++S +K LK  + + N LE  P ++  + +L+ LYL  N
Sbjct: 194 SFLSSLMRLNLSSNQLKSLPAELSGMKRLKHLDCNSNLLETIPPELASMESLELLYLRRN 253

Query: 160 SLNHVPR---------------EINKLCKLH--------VLSLGGNSLTDIPDTFGDLYQ 196
            L  +P                +I  L   H        VL L  N L  +PD    L  
Sbjct: 254 KLRFLPEFPSCKLLKELHVGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQS 313

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII------TLKCLSEKLK 248
           LE L LS+N + SLP S+  L  LK L L  N LRT+  EII       LK L  K+K
Sbjct: 314 LERLDLSNNDISSLPCSLGRLH-LKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIK 370



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 119/229 (51%), Gaps = 14/229 (6%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           EN+  L + HN L   P+  +   NL+ L L +N +T +P+       L  L   NN LT
Sbjct: 128 ENLQKLNVSHNKLKILPEEITNLRNLKGLYLQHNELTCIPEGFEQLSNLEDLDLSNNRLT 187

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             ++P   S L +L   NLS NQL+  P ++  +  LK+L   +N L  +P E+  +  L
Sbjct: 188 --TVPASFSFLSSLMRLNLSSNQLKSLPAELSGMKRLKHLDCNSNLLETIPPELASMESL 245

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLL---LHNNKLR 231
            +L L  N L  +P+ F     L+ L + +NQ+E L A   +LK L S+L   L +NKL+
Sbjct: 246 ELLYLRRNKLRFLPE-FPSCKLLKELHVGENQIEMLGA--EHLKHLNSILVLDLRDNKLK 302

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           ++P EI  L    + L+ L L NN + +LP  +  L  L  L+L  NPL
Sbjct: 303 SVPDEITLL----QSLERLDLSNNDISSLPCSLGRLH-LKFLALEGNPL 346



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 99/199 (49%), Gaps = 9/199 (4%)

Query: 74  NASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE--SLPKDMSNLKNL-KV 130
           N      L+ LD S+ +   +P  + +   S +I   N    +   +PK +  LK +   
Sbjct: 394 NVHTIITLKMLDYSDKQTALIPDEVFDAVKSNIITSINFSKNQLCEIPKRIVELKEMVSD 453

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NLS N+L    +++  +  L +L L NN L+ +P E+  L  L  ++L  N    +P+ 
Sbjct: 454 VNLSFNKLSFISLELCTLQKLTFLDLRNNFLSSLPEEMESLTGLQTINLSFNRFKILPEV 513

Query: 191 FGDLYQLEALILSDNQLESL-PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
              +  LE +++S+NQ+ SL P  +  ++ L +L L NN L  +P E+    C++  L++
Sbjct: 514 LYRIPTLETILISNNQVGSLDPQKMKTMENLITLDLQNNDLLQIPPELGN--CVN--LRT 569

Query: 250 LLLHNNKLRTLPTEIITLK 268
           LLL  N  R +P   I +K
Sbjct: 570 LLLDGNPFR-VPRAAILMK 587



 Score = 46.6 bits (109), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 3/105 (2%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L +N LS  P+     T L++++LS NR   LP+ +   P L T++  NN + +   P+ 
Sbjct: 479 LRNNFLSSLPEEMESLTGLQTINLSFNRFKILPEVLYRIPTLETILISNNQVGSLD-PQK 537

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPR 166
           M  ++NL   +L  N L Q P ++ +   L+ L L  N    VPR
Sbjct: 538 MKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPF-RVPR 581



 Score = 46.2 bits (108), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 81/302 (26%), Positives = 128/302 (42%), Gaps = 55/302 (18%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           QIE+L   ++ K   +I  L L  N L   PD  +   +L  LDLSNN I+ LP ++   
Sbjct: 276 QIEML-GAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGRL 334

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPT---LKYLYLG- 157
                                    +LK   L GN L     +I++  T   LKYL    
Sbjct: 335 -------------------------HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKI 369

Query: 158 -------NNSLNH----VPRE----INKLCKLHVLSLGGNSLTDIPDTFGDLYQ---LEA 199
                  N+S+      +P E    ++ +  L +L         IPD   D  +   + +
Sbjct: 370 KDDGPSQNDSVIETAMTLPSESRVNVHTIITLKMLDYSDKQTALIPDEVFDAVKSNIITS 429

Query: 200 LILSDNQLESLPASISNLK-MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
           +  S NQL  +P  I  LK M+  + L  NKL  +  E+ TL    +KL  L L NN L 
Sbjct: 430 INFSKNQLCEIPKRIVELKEMVSDVNLSFNKLSFISLELCTL----QKLTFLDLRNNFLS 485

Query: 259 TLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQN 318
           +LP E+ +L  L  ++L  N    + + ++ Y+ P+L  +     +V  +D  +    +N
Sbjct: 486 SLPEEMESLTGLQTINLSFNRF--KILPEVLYRIPTLETILISNNQVGSLDPQKMKTMEN 543

Query: 319 LV 320
           L+
Sbjct: 544 LI 545


>gi|383865861|ref|XP_003708391.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Megachile
           rotundata]
          Length = 610

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 121/228 (53%), Gaps = 10/228 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNA-SKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           ++ T+ L  N  + +P    ++FTN+ S++L +N+I  +P  I +    L+ L  + N L
Sbjct: 361 DLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLTKLNMKENQL 420

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA  LP D+    N+   NL  NQL + P  I  + +L+ L L NN L  +P  I  L K
Sbjct: 421 TA--LPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQSLEILILSNNLLKRIPASIANLRK 478

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L VL L  N +  +P+  G L  L+ LIL  NQ+ SLP +I +L  L  L +  N L  L
Sbjct: 479 LRVLDLEENKIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYL 538

Query: 234 PTEIITLKCLSEKLKSLLLHNNK-LRTLPTEIITLKCLSELSLRDNPL 280
           P EI TL    E L SL +++N  L  LP E+     LS +S+ + PL
Sbjct: 539 PEEIGTL----ENLDSLYVNDNANLHNLPFELALCTNLSIMSIENCPL 582



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 130/273 (47%), Gaps = 9/273 (3%)

Query: 9   SSSDSSDSDSFKTVSIKTLDFSYSSLDSETLAT-QIELLPNNDYNK-KPENIDTLLLYHN 66
           SS+  +  D+ KTV++K  + +     ++     Q +L  + ++ + K E +  L L  +
Sbjct: 80  SSASIAGPDTKKTVTVKHPESNKPKPTTKKGKPIQADLDVSKEFTRCKEECVTRLDLSKS 139

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNL 125
           +++  P      T+L    L  N++  LP  I     L TL    N LT  SLP  + NL
Sbjct: 140 SITNLPSTVRDLTHLVEFYLYGNKLVTLPPEIGCLANLETLALSENSLT--SLPNTLENL 197

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           K+L+V +L  N+L + P  +  + +L  L+L  N + +V   I  L  L +LSL  N + 
Sbjct: 198 KSLRVLDLRHNKLSEIPDVVYKLTSLTTLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIK 257

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           ++P   G L  L    +S N LE LP  I N   L +L L +N+L  +P  I  L  L+ 
Sbjct: 258 ELPAGIGKLVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIGNLISLTR 317

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
               L L  N+L  +P  +   K + E S+  N
Sbjct: 318 ----LGLRYNRLSNIPKSLANCKLMDEFSVEGN 346



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 52/164 (31%), Positives = 82/164 (50%), Gaps = 11/164 (6%)

Query: 34  LDSETLATQIEL-LPNNDYNKKPENI------DTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           LD  T    +EL L  N   K P++I      + L+L +N L   P + +    LR LDL
Sbjct: 425 LDIGTWVNMVELNLGTNQLTKIPDDIQCLQSLEILILSNNLLKRIPASIANLRKLRVLDL 484

Query: 87  SNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI 145
             N+I  LP  I     L  LI ++N +T  SLP+ + +L NL   ++  N L   P +I
Sbjct: 485 EENKIESLPNEIGFLRDLQKLILQSNQVT--SLPRAIGHLTNLTYLSVGENNLNYLPEEI 542

Query: 146 LDIPTLKYLYLGNNS-LNHVPREINKLCKLHVLSLGGNSLTDIP 188
             +  L  LY+ +N+ L+++P E+     L ++S+    L+ IP
Sbjct: 543 GTLENLDSLYVNDNANLHNLPFELALCTNLSIMSIENCPLSQIP 586


>gi|260788624|ref|XP_002589349.1| hypothetical protein BRAFLDRAFT_77802 [Branchiostoma floridae]
 gi|229274526|gb|EEN45360.1| hypothetical protein BRAFLDRAFT_77802 [Branchiostoma floridae]
          Length = 1364

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 126/250 (50%), Gaps = 29/250 (11%)

Query: 52  NKKPENIDTLL---LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLI 107
           N +P+ ++ LL   L +  L+  P+     T+L  LD+S N++T +P+AI     LS L 
Sbjct: 5   NLQPQTVNGLLTLDLSNQGLTSIPEEVFDITDLEVLDVSKNKLTSIPEAIGRLRKLSRLH 64

Query: 108 ARNNLLTA---------------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQIL 146
           A  N+LT+                      +LP  +  L+ L + ++ GNQL + P  I 
Sbjct: 65  ADGNMLTSLQQAIGSLQKLTHLYVNRNKLTNLPPGIEKLQKLTLLSICGNQLTEVPSGIY 124

Query: 147 DIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQ 206
            +P L++L + NN L      + KL KL  L + GN LT++P     L  LE L + +N+
Sbjct: 125 LLPNLEFLVVSNNKLTAFNPGVEKLKKLRKLFINGNQLTEVPAGVCSLPNLELLDVDNNK 184

Query: 207 LESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIIT 266
           L + P  +  L+ L+ L +++N+L   P+ + +L  L+     L + NN +R LP ++  
Sbjct: 185 LSTFPPGVEKLQKLRELYINDNQLTEAPSGVCSLPNLA----VLNVSNNPIRRLPDDVTQ 240

Query: 267 LKCLSELSLR 276
           L  L  LS+R
Sbjct: 241 LTRLKTLSVR 250



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/241 (30%), Positives = 114/241 (47%), Gaps = 26/241 (10%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA------ 115
           L    L+  P+     T+L  LD+SNN +T +P+AI     LS L A  N+LT+      
Sbjct: 408 LTDQGLTSIPEEVFDITDLEVLDVSNNELTSIPEAIGRLHKLSRLHADGNMLTSLPQAIA 467

Query: 116 ---------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                           + P  +  L+ L    ++ NQL + P  +  +P L+ L + +N+
Sbjct: 468 SMLELTHLFINDNKLSTFPPGVEKLQKLAHLFMNDNQLREVPPGVCSLPNLEVLCVRSNN 527

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L+  P  + KL KL  L +  N LT++P     L  LE  I+ +N+L +LP  +S L  L
Sbjct: 528 LSTFPPGVEKLQKLRELYIHDNQLTEVPPGLCSLSNLEVFIVINNELSTLPPGMSQLLKL 587

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           + +LL NNK  T P  +  L  + E    L + NN +  LPT +     L +L +  NPL
Sbjct: 588 REILLGNNKFDTFPEVLCELPAMEE----LDIRNNNITRLPTALHRADKLKDLDVSGNPL 643

Query: 281 V 281
            
Sbjct: 644 T 644



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 74/248 (29%), Positives = 117/248 (47%), Gaps = 38/248 (15%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L + +N LS FP    K   LR L +++N++T  P  + + P L+ L   NN +  
Sbjct: 174 NLELLDVDNNKLSTFPPGVEKLQKLRELYINDNQLTEAPSGVCSLPNLAVLNVSNNPI-- 231

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP D++ L  LK  ++ G Q ++FP Q+L + TL  LY G              CK  
Sbjct: 232 RRLPDDVTQLTRLKTLSVRGCQFDEFPRQVLQLKTLVVLYAGG-------------CKFD 278

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +          +PD  G L  L+ L L  N L +LP+++S++  L+ + LH NK  T P 
Sbjct: 279 I----------VPDEVGSLQHLQVLALDKNLLRTLPSTMSHMHNLREVYLHGNKFNTFP- 327

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
           E++   C    ++ L + NN +  LPT +     L  L +  NPL        TY P  +
Sbjct: 328 EVL---CELPAMEKLDISNNNITRLPTALHRADKLEVLDVSGNPL--------TYPPHDV 376

Query: 296 LELASRTL 303
            E  +  +
Sbjct: 377 CEQGTGAI 384



 Score = 94.7 bits (234), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 75/265 (28%), Positives = 120/265 (45%), Gaps = 36/265 (13%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT- 114
           N+  + L+ N  + FP+   +   +  LD+SNN IT LP A+     L  L    N LT 
Sbjct: 312 NLREVYLHGNKFNTFPEVLCELPAMEKLDISNNNITRLPTALHRADKLEVLDVSGNPLTY 371

Query: 115 --------------------AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYL 154
                               AE+L   +  ++     +L+   L   P ++ DI  L+ L
Sbjct: 372 PPHDVCEQGTGAILAFLKQKAENL--QLQTVRGCLQVDLTDQGLTSIPEEVFDITDLEVL 429

Query: 155 YLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASI 214
            + NN L  +P  I +L KL  L   GN LT +P     + +L  L ++DN+L + P  +
Sbjct: 430 DVSNNELTSIPEAIGRLHKLSRLHADGNMLTSLPQAIASMLELTHLFINDNKLSTFPPGV 489

Query: 215 SNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
             L+ L  L +++N+LR +P  + +L      L+ L + +N L T P  +  L+ L EL 
Sbjct: 490 EKLQKLAHLFMNDNQLREVPPGVCSLP----NLEVLCVRSNNLSTFPPGVEKLQKLRELY 545

Query: 275 LRDNPLVIRFVSDMTYKPPSLLELA 299
           + DN         +T  PP L  L+
Sbjct: 546 IHDN--------QLTEVPPGLCSLS 562



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 71/238 (29%), Positives = 108/238 (45%), Gaps = 22/238 (9%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L +  N L+  P    K   L  L +  N++T +P  I   P L  L+  NN LTA    
Sbjct: 86  LYVNRNKLTNLPPGIEKLQKLTLLSICGNQLTEVPSGIYLLPNLEFLVVSNNKLTA--FN 143

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             +  LK L+   ++GNQL + P  +  +P L+ L + NN L+  P  + KL KL  L +
Sbjct: 144 PGVEKLKKLRKLFINGNQLTEVPAGVCSLPNLELLDVDNNKLSTFPPGVEKLQKLRELYI 203

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N LT+ P     L  L  L +S+N +  LP  ++ L  LK+L +   +    P +++ 
Sbjct: 204 NDNQLTEAPSGVCSLPNLAVLNVSNNPIRRLPDDVTQLTRLKTLSVRGCQFDEFPRQVLQ 263

Query: 240 LKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           LK L                    + L+ L L  N LRTLP+ +  +  L E+ L  N
Sbjct: 264 LKTLVVLYAGGCKFDIVPDEVGSLQHLQVLALDKNLLRTLPSTMSHMHNLREVYLHGN 321



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/178 (26%), Positives = 86/178 (48%), Gaps = 3/178 (1%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L +  N LS FP    K   L  L +++N++  +P  + + P L  L  R+N L+  + P
Sbjct: 475 LFINDNKLSTFPPGVEKLQKLAHLFMNDNQLREVPPGVCSLPNLEVLCVRSNNLS--TFP 532

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             +  L+ L+   +  NQL + P  +  +  L+   + NN L+ +P  +++L KL  + L
Sbjct: 533 PGVEKLQKLRELYIHDNQLTEVPPGLCSLSNLEVFIVINNELSTLPPGMSQLLKLREILL 592

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
           G N     P+   +L  +E L + +N +  LP ++     LK L +  N L   P ++
Sbjct: 593 GNNKFDTFPEVLCELPAMEELDIRNNNITRLPTALHRADKLKDLDVSGNPLTYPPQDV 650



 Score = 41.6 bits (96), Expect = 0.75,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 60/155 (38%), Gaps = 47/155 (30%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITH----------------------- 93
           N++ L +  NNLS FP    K   LR L + +N++T                        
Sbjct: 517 NLEVLCVRSNNLSTFPPGVEKLQKLRELYIHDNQLTEVPPGLCSLSNLEVFIVINNELST 576

Query: 94  LPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKY 153
           LP                          MS L  L+   L  N+ + FP  + ++P ++ 
Sbjct: 577 LPPG------------------------MSQLLKLREILLGNNKFDTFPEVLCELPAMEE 612

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
           L + NN++  +P  +++  KL  L + GN LT  P
Sbjct: 613 LDIRNNNITRLPTALHRADKLKDLDVSGNPLTYPP 647


>gi|254415005|ref|ZP_05028768.1| Miro-like protein [Coleofasciculus chthonoplastes PCC 7420]
 gi|196178152|gb|EDX73153.1| Miro-like protein [Coleofasciculus chthonoplastes PCC 7420]
          Length = 1090

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 122/239 (51%), Gaps = 13/239 (5%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAES 117
           + +L L +N +   P    + T+L+SL+LS N I  LP  I        +  +     + 
Sbjct: 124 LQSLDLRYNKIQELPPEIGQLTSLQSLNLSGNNIQELPPEIGQLTALQSLDLSFFNNIQE 183

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LP  +  L +L+  +LS N++++ P +IL + +L+ L+L  N +  +P EI +L  L  L
Sbjct: 184 LPPQIFQLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPAEILQLTSLQSL 243

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            L  N + ++P     L  L++L L  N ++ LP  I  L  L+SL L  N ++ LP EI
Sbjct: 244 HLSFNKIQELPAEILQLTSLQSLNLYSNNIQELPPEILQLTSLQSLNLGGNNIQELPPEI 303

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
           + L  L    +SL L +N ++ LP EI  L  L +L LR NPL I         PP +L
Sbjct: 304 LQLTSL----QSLNLRSNNIQELPPEIRQLPNLKKLDLRSNPLPI---------PPEIL 349



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/245 (33%), Positives = 131/245 (53%), Gaps = 16/245 (6%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAE 116
           ++ L +  N L   P    + T+L+SL+L  N+I  LP  I     L +L  R N +  +
Sbjct: 78  LEELQIALNQLQELPPEILQLTSLQSLNLGCNKIQELPPEIGQLTSLQSLDLRYNKI--Q 135

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG-NNSLNHVPREINKLCKLH 175
            LP ++  L +L+  NLSGN +++ P +I  +  L+ L L   N++  +P +I +L  L 
Sbjct: 136 ELPPEIGQLTSLQSLNLSGNNIQELPPEIGQLTALQSLDLSFFNNIQELPPQIFQLTSLQ 195

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N + ++P     L  L++L LS N+++ LPA I  L  L+SL L  NK++ LP 
Sbjct: 196 SLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPA 255

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSL 295
           EI+ L      L+SL L++N ++ LP EI+ L  L  L+L  N        ++   PP +
Sbjct: 256 EILQLTS----LQSLNLYSNNIQELPPEILQLTSLQSLNLGGN--------NIQELPPEI 303

Query: 296 LELAS 300
           L+L S
Sbjct: 304 LQLTS 308



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 76/216 (35%), Positives = 119/216 (55%), Gaps = 10/216 (4%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTAESLPKDMS 123
           N +   P    + T+L+SLDL  N+I  LP  I     L +L ++ NN+   + LP ++ 
Sbjct: 109 NKIQELPPEIGQLTSLQSLDLRYNKIQELPPEIGQLTSLQSLNLSGNNI---QELPPEIG 165

Query: 124 NLKNLKVFNLS-GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
            L  L+  +LS  N +++ P QI  + +L+ L+L  N +  +P EI +L  L  L L  N
Sbjct: 166 QLTALQSLDLSFFNNIQELPPQIFQLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFN 225

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            + ++P     L  L++L LS N+++ LPA I  L  L+SL L++N ++ LP EI+ L  
Sbjct: 226 KIQELPAEILQLTSLQSLHLSFNKIQELPAEILQLTSLQSLNLYSNNIQELPPEILQLTS 285

Query: 243 LSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
               L+SL L  N ++ LP EI+ L  L  L+LR N
Sbjct: 286 ----LQSLNLGGNNIQELPPEILQLTSLQSLNLRSN 317



 Score = 91.3 bits (225), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 112/221 (50%), Gaps = 15/221 (6%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           E    L L  N+L+  P +  K T+L+ L L         Q      ++  I   N L+A
Sbjct: 16  EEWTELDLSGNDLTVLPPDIGKLTHLKKLILGKY------QYDDEGDIAGFIG--NKLSA 67

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++  L  L+   ++ NQL++ P +IL + +L+ L LG N +  +P EI +L  L 
Sbjct: 68  --LPREIGQLHQLEELQIALNQLQELPPEILQLTSLQSLNLGCNKIQELPPEIGQLTSLQ 125

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL-LLHNNKLRTLP 234
            L L  N + ++P   G L  L++L LS N ++ LP  I  L  L+SL L   N ++ LP
Sbjct: 126 SLDLRYNKIQELPPEIGQLTSLQSLNLSGNNIQELPPEIGQLTALQSLDLSFFNNIQELP 185

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            +I  L      L+SL L  NK++ LP EI+ L  L  L L
Sbjct: 186 PQIFQLTS----LQSLHLSFNKIQELPAEILQLTSLQSLHL 222



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 73/217 (33%), Positives = 117/217 (53%), Gaps = 9/217 (4%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSN-NRITHLPQAITNFPLSTLIARN-NLLTA 115
           + +L L  NN+   P    + T L+SLDLS  N I  LP  I  F L++L + + +    
Sbjct: 147 LQSLNLSGNNIQELPPEIGQLTALQSLDLSFFNNIQELPPQI--FQLTSLQSLHLSFNKI 204

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           + LP ++  L +L+  +LS N++++ P +IL + +L+ L+L  N +  +P EI +L  L 
Sbjct: 205 QELPAEILQLTSLQSLHLSFNKIQELPAEILQLTSLQSLHLSFNKIQELPAEILQLTSLQ 264

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L+L  N++ ++P     L  L++L L  N ++ LP  I  L  L+SL L +N ++ LP 
Sbjct: 265 SLNLYSNNIQELPPEILQLTSLQSLNLGGNNIQELPPEILQLTSLQSLNLRSNNIQELPP 324

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSE 272
           EI  L      LK L L +N L  +P EI+  K   E
Sbjct: 325 EIRQLP----NLKKLDLRSNPL-PIPPEILGSKEWYE 356



 Score = 55.5 bits (132), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 44/118 (37%), Positives = 57/118 (48%), Gaps = 18/118 (15%)

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILS--------------DNQLESLPASISNLKMLKS 222
           L L GN LT +P   G L  L+ LIL                N+L +LP  I  L  L+ 
Sbjct: 21  LDLSGNDLTVLPPDIGKLTHLKKLILGKYQYDDEGDIAGFIGNKLSALPREIGQLHQLEE 80

Query: 223 LLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L +  N+L+ LP EI+ L      L+SL L  NK++ LP EI  L  L  L LR N +
Sbjct: 81  LQIALNQLQELPPEILQLTS----LQSLNLGCNKIQELPPEIGQLTSLQSLDLRYNKI 134


>gi|429962987|gb|ELA42531.1| hypothetical protein VICG_00283, partial [Vittaforma corneae ATCC
           50505]
          Length = 258

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 77/214 (35%), Positives = 105/214 (49%), Gaps = 28/214 (13%)

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLK 126
           ++ F   N  +   L  LDLS+N++                        ESLP ++  LK
Sbjct: 55  DIRFIGSNIKRLVRLERLDLSHNKL------------------------ESLPSEIGELK 90

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL+  +L  NQ E FP  I  +  L  L L  N+L  +P  I KL  L +L+LG N L  
Sbjct: 91  NLRCLDLGYNQFESFPTVIGKLENLYVLELYKNNLESLPDVIGKLKNLGMLNLGNNKLET 150

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P   G+L  L  L L +N L++LP  I  L+ L  L L NNKL TLP ++  L    E 
Sbjct: 151 LPPVIGELEDLGILYLHENNLKTLPDVIVKLRKLHDLYLSNNKLETLPAKLEEL----EN 206

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L +L L  N ++TLP  I+ L+ L  L L DN L
Sbjct: 207 LSTLSLDENNIKTLPDVIVKLRNLRGLYLNDNKL 240



 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/241 (34%), Positives = 115/241 (47%), Gaps = 14/241 (5%)

Query: 7   SSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHN 66
           S + ++     SF    + T + S    D   + + I         K+   ++ L L HN
Sbjct: 27  SDNGANPGGIYSFGNYPVDTTEISICRQDIRFIGSNI---------KRLVRLERLDLSHN 77

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLTAESLPKDMSN 124
            L   P    +  NLR LDL  N+    P  I     L  L + +NNL   ESLP  +  
Sbjct: 78  KLESLPSEIGELKNLRCLDLGYNQFESFPTVIGKLENLYVLELYKNNL---ESLPDVIGK 134

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           LKNL + NL  N+LE  P  I ++  L  LYL  N+L  +P  I KL KLH L L  N L
Sbjct: 135 LKNLGMLNLGNNKLETLPPVIGELEDLGILYLHENNLKTLPDVIVKLRKLHDLYLSNNKL 194

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
             +P    +L  L  L L +N +++LP  I  L+ L+ L L++NKL TLP  I  L+ L 
Sbjct: 195 ETLPAKLEELENLSTLSLDENNIKTLPDVIVKLRNLRGLYLNDNKLETLPAAIGELEHLR 254

Query: 245 E 245
           E
Sbjct: 255 E 255


>gi|426215732|ref|XP_004002123.1| PREDICTED: leucine-rich repeat-containing protein 40 [Ovis aries]
          Length = 602

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/227 (39%), Positives = 126/227 (55%), Gaps = 15/227 (6%)

Query: 57  NIDTLLLYHNNLSFFPDNASKF----TNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           N+D     + NLSF   NAS+     T+L  L +SNN++  L   +   P L+ L   +N
Sbjct: 59  NVDIPEEANQNLSF---NASERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDN 115

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  SLP  +  L+NL+  N+S N+L+  P +I ++  LK LYL +N L  +P    +L
Sbjct: 116 QLT--SLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKGLYLQHNELTCIPEGFEQL 173

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L L  N LT +P +F  L  L  L LS NQL+SLPA +S +K LK L  ++N L 
Sbjct: 174 SNLEDLDLSNNRLTTVPASFSFLSSLVRLNLSSNQLKSLPAELSGMKRLKHLDCNSNLLE 233

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           T+P E+ ++    E L+ L L  NKLR LP E  + K L EL + +N
Sbjct: 234 TIPPELASM----ESLELLYLRRNKLRFLP-EFPSCKLLKELHVGEN 275



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 117/238 (49%), Gaps = 37/238 (15%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           ++++LP    N +  N+  L L HN L+  P+   + +NL  LDLSNNR+T +P +   F
Sbjct: 139 KLKILPEEITNLR--NLKGLYLQHNELTCIPEGFEQLSNLEDLDLSNNRLTTVPAS---F 193

Query: 102 PLSTLIARNNLLTAE--SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
              + + R NL + +  SLP ++S +K LK  + + N LE  P ++  + +L+ LYL  N
Sbjct: 194 SFLSSLVRLNLSSNQLKSLPAELSGMKRLKHLDCNSNLLETIPPELASMESLELLYLRRN 253

Query: 160 SLNHVPR---------------EINKLCKLH--------VLSLGGNSLTDIPDTFGDLYQ 196
            L  +P                +I KL   H        VL L  N L  +PD    L  
Sbjct: 254 KLRFLPEFPSCKLLKELHVGENQIEKLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQS 313

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII------TLKCLSEKLK 248
           LE L LS+N + SLP S+  L  LK L L  N LRT+  EII       LK L  K+K
Sbjct: 314 LERLDLSNNDISSLPCSLGRLH-LKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIK 370



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 119/229 (51%), Gaps = 14/229 (6%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           EN+  L + HN L   P+  +   NL+ L L +N +T +P+       L  L   NN LT
Sbjct: 128 ENLQKLNVSHNKLKILPEEITNLRNLKGLYLQHNELTCIPEGFEQLSNLEDLDLSNNRLT 187

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             ++P   S L +L   NLS NQL+  P ++  +  LK+L   +N L  +P E+  +  L
Sbjct: 188 --TVPASFSFLSSLVRLNLSSNQLKSLPAELSGMKRLKHLDCNSNLLETIPPELASMESL 245

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLL---LHNNKLR 231
            +L L  N L  +P+ F     L+ L + +NQ+E L A   +LK L S+L   L +NKL+
Sbjct: 246 ELLYLRRNKLRFLPE-FPSCKLLKELHVGENQIEKLGA--EHLKHLNSILVLDLRDNKLK 302

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           ++P EI  L    + L+ L L NN + +LP  +  L  L  L+L  NPL
Sbjct: 303 SVPDEITLL----QSLERLDLSNNDISSLPCSLGRLH-LKFLALEGNPL 346



 Score = 62.4 bits (150), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 57/199 (28%), Positives = 100/199 (50%), Gaps = 9/199 (4%)

Query: 74  NASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE--SLPKDMSNLKNL-KV 130
           N      L+ LD S+ +   +P  + +   S +I   N    +   +PK +  LK +   
Sbjct: 394 NVHTILTLKMLDYSDKQTALIPDEVFDAVKSNIITSINFSKNQLCEIPKRIVELKEMVSD 453

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NLS N+L    +++  +  L +L L NN LN +P E+  L +L  ++L  N    +P+ 
Sbjct: 454 VNLSYNKLSSISLELCTLQKLTFLDLRNNFLNSLPEEMESLTRLQTINLSFNRFKILPEV 513

Query: 191 FGDLYQLEALILSDNQLESL-PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
              +  LE +++S+NQ+ +L P  +  ++ L +L L NN L  +P E+    C++  L++
Sbjct: 514 LYRIPTLETVLISNNQVGALDPQKMKTMENLITLDLQNNDLLQIPPELGN--CVN--LRT 569

Query: 250 LLLHNNKLRTLPTEIITLK 268
           LLL  N  R +P   I +K
Sbjct: 570 LLLDGNPFR-VPRAAILMK 587



 Score = 45.8 bits (107), Expect = 0.033,   Method: Compositional matrix adjust.
 Identities = 34/105 (32%), Positives = 54/105 (51%), Gaps = 3/105 (2%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L +N L+  P+     T L++++LS NR   LP+ +   P L T++  NN + A   P+ 
Sbjct: 479 LRNNFLNSLPEEMESLTRLQTINLSFNRFKILPEVLYRIPTLETVLISNNQVGALD-PQK 537

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPR 166
           M  ++NL   +L  N L Q P ++ +   L+ L L  N    VPR
Sbjct: 538 MKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPF-RVPR 581



 Score = 40.4 bits (93), Expect = 1.6,   Method: Compositional matrix adjust.
 Identities = 65/247 (26%), Positives = 110/247 (44%), Gaps = 31/247 (12%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIA--RNNLL 113
           E+++ L L  N L F P+  S    L+ L +  N+I  L         S L+   R+N L
Sbjct: 243 ESLELLYLRRNKLRFLPEFPS-CKLLKELHVGENQIEKLGAEHLKHLNSILVLDLRDNKL 301

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
             +S+P +++ L++L+  +LS N +   P  +  +  LK+L L  N L  + REI     
Sbjct: 302 --KSVPDEITLLQSLERLDLSNNDISSLPCSLGRL-HLKFLALEGNPLRTIRREIINKGT 358

Query: 174 LHVLSLGGNSLTDIPDTFGD-------------------LYQLEALILSDNQLESLPASI 214
             VL    + + D   +  D                   +  L+ L  SD Q   +P  +
Sbjct: 359 QEVLKYLRSKIKDDGPSQNDSVTETAMTLPSESRVNVHTILTLKMLDYSDKQTALIPDEV 418

Query: 215 SNL---KMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
            +     ++ S+    N+L  +P  I+ LK   E +  + L  NKL ++  E+ TL+ L+
Sbjct: 419 FDAVKSNIITSINFSKNQLCEIPKRIVELK---EMVSDVNLSYNKLSSISLELCTLQKLT 475

Query: 272 ELSLRDN 278
            L LR+N
Sbjct: 476 FLDLRNN 482


>gi|116328019|ref|YP_797739.1| hypothetical protein LBL_1314 [Leptospira borgpetersenii serovar
           Hardjo-bovis str. L550]
 gi|116331528|ref|YP_801246.1| hypothetical protein LBJ_1970 [Leptospira borgpetersenii serovar
           Hardjo-bovis str. JB197]
 gi|116120763|gb|ABJ78806.1| Leucine-rich repeat protein [Leptospira borgpetersenii serovar
           Hardjo-bovis str. L550]
 gi|116125217|gb|ABJ76488.1| Leucine-rich repeat protein [Leptospira borgpetersenii serovar
           Hardjo-bovis str. JB197]
          Length = 287

 Score =  103 bits (256), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 89/264 (33%), Positives = 130/264 (49%), Gaps = 39/264 (14%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLR 82
            ++ LD S   L  ETL+ +I            +N++ L+L+ N L+  P    K  NL 
Sbjct: 18  EVRILDLSSQEL--ETLSEEIGTF---------QNLEKLILFRNRLTAIPKEIGKLRNLE 66

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           +L L+ NR+  +P  I     L TL    N L+  +LP  +  L+NLK  NLSGNQL   
Sbjct: 67  TLILAENRLKTIPNEIEQLQNLKTLDLYENKLS--NLPNGIGKLENLKELNLSGNQLSVL 124

Query: 142 PI---------------------QILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
           PI                     +I ++  L+ L L  N +  +P+EI++L  L  L LG
Sbjct: 125 PIAQLQNLEILELFRNQFTTLPKEITELKNLQILNLFENKIKTLPKEISRLSNLIWLDLG 184

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
            N +  +   F     L++L L DN+LE L A I+ LK L+ L L+ N+ + LP EI+ L
Sbjct: 185 KNKIERLSLDFKGFQNLKSLNLLDNKLEHLSADIAQLKSLEFLNLNYNRFKILPEEILQL 244

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEI 264
               E L+ L L  N+L +LP EI
Sbjct: 245 ----ENLQVLELTGNQLTSLPEEI 264



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 88/238 (36%), Positives = 119/238 (50%), Gaps = 27/238 (11%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
           +NNL     N S+   +R LDLS+  +  L + I  F  L  LI   N LTA  +PK++ 
Sbjct: 6   YNNLEKSLQNPSE---VRILDLSSQELETLSEEIGTFQNLEKLILFRNRLTA--IPKEIG 60

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            L+NL+   L+ N+L+  P +I  +  LK L L  N L+++P  I KL  L  L+L GN 
Sbjct: 61  KLRNLETLILAENRLKTIPNEIEQLQNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQ 120

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           L+ +P     L  LE L L  NQ  +LP  I+ LK L+ L L  NK++TLP EI  L  L
Sbjct: 121 LSVLP--IAQLQNLEILELFRNQFTTLPKEITELKNLQILNLFENKIKTLPKEISRLSNL 178

Query: 244 S-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
                               + LKSL L +NKL  L  +I  LK L  L+L  N   I
Sbjct: 179 IWLDLGKNKIERLSLDFKGFQNLKSLNLLDNKLEHLSADIAQLKSLEFLNLNYNRFKI 236



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 59/167 (35%), Positives = 84/167 (50%), Gaps = 6/167 (3%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +L K + N   +++ +LS  +LE    +I     L+ L L  N L  +P+EI KL  
Sbjct: 5   TYNNLEKSLQNPSEVRILDLSSQELETLSEEIGTFQNLEKLILFRNRLTAIPKEIGKLRN 64

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L  IP+    L  L+ L L +N+L +LP  I  L+ LK L L  N+L  L
Sbjct: 65  LETLILAENRLKTIPNEIEQLQNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQLSVL 124

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P   +      + L+ L L  N+  TLP EI  LK L  L+L +N +
Sbjct: 125 PIAQL------QNLEILELFRNQFTTLPKEITELKNLQILNLFENKI 165



 Score = 73.2 bits (178), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/185 (31%), Positives = 89/185 (48%), Gaps = 22/185 (11%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQA-ITNFPLSTLIARNNLLT 114
           +N+ TL LY N LS  P+   K  NL+ L+LS N+++ LP A + N  +  L  RN   T
Sbjct: 86  QNLKTLDLYENKLSNLPNGIGKLENLKELNLSGNQLSVLPIAQLQNLEILELF-RNQFTT 144

Query: 115 --------------------AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYL 154
                                ++LPK++S L NL   +L  N++E+  +       LK L
Sbjct: 145 LPKEITELKNLQILNLFENKIKTLPKEISRLSNLIWLDLGKNKIERLSLDFKGFQNLKSL 204

Query: 155 YLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASI 214
            L +N L H+  +I +L  L  L+L  N    +P+    L  L+ L L+ NQL SLP  I
Sbjct: 205 NLLDNKLEHLSADIAQLKSLEFLNLNYNRFKILPEEILQLENLQVLELTGNQLTSLPEEI 264

Query: 215 SNLKM 219
              ++
Sbjct: 265 GKTRI 269


>gi|456969516|gb|EMG10507.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. LT2186]
          Length = 235

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/179 (40%), Positives = 96/179 (53%), Gaps = 3/179 (1%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
            N L   P       NL+ L LS N IT LP  I N   L  L    N L  E++PK++ 
Sbjct: 59  ENPLKTLPKEIGNLQNLKKLYLSANEITTLPPEIGNLKNLQVLSLNGNRL--ETIPKEIG 116

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           NLKNLK  ++  N+L+  P +I ++  LK LYL  N L  +P+EI  L KL  + L  N 
Sbjct: 117 NLKNLKELSIEWNKLQTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRMHLSTNE 176

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
           LT +P    +L  L  + L DNQ  +LP  I NLK L++L+L  N+L +L  EI  LK 
Sbjct: 177 LTKLPQEIKNLESLLEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKI 235



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 88/165 (53%), Gaps = 3/165 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N ++  P       NL+ L L+ NR+  +P+ I N   L  L    N L 
Sbjct: 73  QNLKKLYLSANEITTLPPEIGNLKNLQVLSLNGNRLETIPKEIGNLKNLKELSIEWNKL- 131

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            ++LPK++ NLKNLK   LS NQL+  P +I ++  L+ ++L  N L  +P+EI  L  L
Sbjct: 132 -QTLPKEIGNLKNLKELYLSRNQLKILPQEIGNLRKLQRMHLSTNELTKLPQEIKNLESL 190

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
             + L  N  T +P   G+L  L  L+L  NQL SL   I NLK+
Sbjct: 191 LEIYLYDNQFTTLPKEIGNLKNLRNLVLGRNQLISLLPEIGNLKI 235



 Score = 80.9 bits (198), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 56/134 (41%), Positives = 73/134 (54%), Gaps = 4/134 (2%)

Query: 147 DIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQ 206
           D+  L Y     N L  +P+EI  L  L  L L  N +T +P   G+L  L+ L L+ N+
Sbjct: 48  DVLVLNYRDNEENPLKTLPKEIGNLQNLKKLYLSANEITTLPPEIGNLKNLQVLSLNGNR 107

Query: 207 LESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIIT 266
           LE++P  I NLK LK L +  NKL+TLP EI  LK     LK L L  N+L+ LP EI  
Sbjct: 108 LETIPKEIGNLKNLKELSIEWNKLQTLPKEIGNLK----NLKELYLSRNQLKILPQEIGN 163

Query: 267 LKCLSELSLRDNPL 280
           L+ L  + L  N L
Sbjct: 164 LRKLQRMHLSTNEL 177


>gi|384499101|gb|EIE89592.1| hypothetical protein RO3G_14303 [Rhizopus delemar RA 99-880]
          Length = 464

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 84/265 (31%), Positives = 129/265 (48%), Gaps = 20/265 (7%)

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           PK MS        +LS   L +    I  +  L  L L NN +  +P+E+  L  L +L+
Sbjct: 46  PKSMS-------IDLSYRSLVELSPSIGYLSNLTSLILSNNQMTALPKEVGYLKNLRLLN 98

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           +  N + +IPDT   L  L+AL  S N L++LPASI  L  L  +++  N++  LP E+ 
Sbjct: 99  ISDNKIHEIPDTIAFLSNLKALYASRNNLKTLPASIGQLSELTHIIVSENQITFLPKEMS 158

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLEL 298
            L      L SL +  N LRTLP EI TL  L++L          ++ ++ + PPSL+E 
Sbjct: 159 QLS----NLNSLYVSYNPLRTLPAEIATLTTLTKLMTEGCDFQEEYIYNLRHDPPSLMET 214

Query: 299 ASRTLKVHEID--YSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYR 356
            +R    HE++  YS   L  ++  YL  A+ C    C G +FD+ +   +F +      
Sbjct: 215 CARIAVRHELEIPYS---LADHIKNYLARANKC--SYCHGPYFDSHVTRYQFAERLANNT 269

Query: 357 IPLLQYLCSSRCITNSPNV--MYGD 379
           + L   LCS+    +   V  M+ D
Sbjct: 270 LALEYTLCSAHWSDDQDRVLAMFSD 294



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 47/145 (32%), Positives = 70/145 (48%), Gaps = 16/145 (11%)

Query: 26  TLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLD 85
           ++D SY SL        +EL P+  Y     N+ +L+L +N ++  P       NLR L+
Sbjct: 50  SIDLSYRSL--------VELSPSIGY---LSNLTSLILSNNQMTALPKEVGYLKNLRLLN 98

Query: 86  LSNNRITHLPQAITNFP-LSTLIA-RNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPI 143
           +S+N+I  +P  I     L  L A RNNL T   LP  +  L  L    +S NQ+   P 
Sbjct: 99  ISDNKIHEIPDTIAFLSNLKALYASRNNLKT---LPASIGQLSELTHIIVSENQITFLPK 155

Query: 144 QILDIPTLKYLYLGNNSLNHVPREI 168
           ++  +  L  LY+  N L  +P EI
Sbjct: 156 EMSQLSNLNSLYVSYNPLRTLPAEI 180


>gi|442619581|ref|NP_001262665.1| Sur-8, isoform E [Drosophila melanogaster]
 gi|440217532|gb|AGB96045.1| Sur-8, isoform E [Drosophila melanogaster]
          Length = 694

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/228 (34%), Positives = 123/228 (53%), Gaps = 10/228 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNA-SKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
            + T+ L  N  + +P    ++FTN+ S++L +NRI  +P  I +    L+ L  + N+L
Sbjct: 392 GLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENML 451

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA  LP D+    N+   NL+ N L++ P  I+++  L+ L L NN L  +P  I  L K
Sbjct: 452 TA--LPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRK 509

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N +  +P   G L++L+ LIL  NQ+  LP SI +L  L  L +  N L+ L
Sbjct: 510 LRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFL 569

Query: 234 PTEIITLKCLSEKLKSLLLHNN-KLRTLPTEIITLKCLSELSLRDNPL 280
           P EI +L    E L++L ++ N  L  LP E+   + L  L++   PL
Sbjct: 570 PEEIGSL----ESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCPL 613



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 127/268 (47%), Gaps = 24/268 (8%)

Query: 14  SDSDSFKTV------SIKTLDFSYSSLD--SETLATQIEL----LPNNDYNKKPENIDTL 61
           +D D  K +       IK LD S SS+     T+   + L    L +N   + P  I  L
Sbjct: 146 ADQDVIKALQRCRDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCL 205

Query: 62  L------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +      L  N+L+  P++    + L+ LDL +N++  +P  I     L+TL  R N +T
Sbjct: 206 VSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRIT 265

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  +  D+  L NL + +L  N++ +    I  +  L  L + +N L H+P +I     L
Sbjct: 266 A--VADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNL 323

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L DIPD+ G+L  L  L +  N+L S+PA++ N K +    +  N +  LP
Sbjct: 324 SALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLP 383

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPT 262
             +  L  LS  L ++ L  N+  + PT
Sbjct: 384 DGM--LASLS-GLTTITLSRNQFASYPT 408



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 78/253 (30%), Positives = 119/253 (47%), Gaps = 33/253 (13%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ TL + HN+L   P++     NL +LDL +N +  +P +I N   L  L  R N L+ 
Sbjct: 299 NLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLS- 357

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPI-----------------QILDIPT-------- 150
            S+P  + N K++  FN+ GN + Q P                  Q    PT        
Sbjct: 358 -SVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTN 416

Query: 151 LKYLYLGNNSLNHVPREINKLCK-LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
           +  + L +N ++ +P  I    K L  L++  N LT +P   G    +  L L+ N L+ 
Sbjct: 417 VYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQK 476

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           LP  I NL+ L+ L+L NN L+ +P  I  L+    KL+ L L  N++  LP EI  L  
Sbjct: 477 LPDDIMNLQNLEILILSNNMLKKIPNTIGNLR----KLRILDLEENRIEVLPHEIGLLHE 532

Query: 270 LSELSLRDNPLVI 282
           L  L L+ N + +
Sbjct: 533 LQRLILQTNQITM 545



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 109/229 (47%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           + E I  L L  ++++  P    +  +L  L L +N+I  LP  I     L  L    N 
Sbjct: 158 RDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENS 217

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  SLP+ + N   LKV +L  N+L + P  I  + +L  LYL  N +  V  ++ +L 
Sbjct: 218 LT--SLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLV 275

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L +LSL  N + ++    G L  L  L +S N LE LP  I N   L +L L +N+L  
Sbjct: 276 NLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLD 335

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +P  I  LK L      L +  N+L ++P  +   K + E ++  N + 
Sbjct: 336 IPDSIGNLKSLVR----LGMRYNRLSSVPATLKNCKSMDEFNVEGNGIT 380



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 13/165 (7%)

Query: 34  LDSETLATQIEL-LPNNDYNKKP------ENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           LD  T    +EL L  N   K P      +N++ L+L +N L   P+       LR LDL
Sbjct: 456 LDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDL 515

Query: 87  SNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI 145
             NRI  LP  I     L  LI + N +T   LP+ + +L NL   ++S N L+  P +I
Sbjct: 516 EENRIEVLPHEIGLLHELQRLILQTNQITM--LPRSIGHLGNLTHLSVSENNLQFLPEEI 573

Query: 146 LDIPTLKYLYLGNN-SLNHVPREINKLCK-LHVLSLGGNSLTDIP 188
             + +L+ LY+  N  L  +P E+  LC+ L  L++    L+ IP
Sbjct: 574 GSLESLENLYINQNPGLEKLPFEL-ALCQNLKYLNIDKCPLSTIP 617


>gi|405976624|gb|EKC41124.1| Leucine-rich repeat-containing protein 69 [Crassostrea gigas]
          Length = 345

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 98/334 (29%), Positives = 148/334 (44%), Gaps = 48/334 (14%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L+  P   S    L+ L+L NN    LP+ +     L  L   NN L   + P
Sbjct: 40  LQLRGNKLNTLPMELSHLFQLQILNLGNNEFEELPEVLEYLTMLEKLHLFNNKLKTLA-P 98

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
           K ++NL+NL   NL+ N L+ FP +I  + +L++L + +N L  +P EI  L +L    +
Sbjct: 99  KVLTNLRNLTFLNLNSNNLKTFPPEICRLSSLQHLSVDSNQLTELPVEICALLRLEEFHV 158

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N LT +P  FG L  LE L L  N++  LP S+     L+++ +  N+LR  PTE   
Sbjct: 159 ANNQLTSLPLEFGFLVNLEKLYLQKNKIRELPESLGKCYKLRTVDIAANELRIFPTE--- 215

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV--IRFVSDMTYKPPSLLE 297
                            L  LP        L EL   +NPL+  I   S    +  SL E
Sbjct: 216 -----------------LSALP--------LKELHCEENPLLQHIPVHSVQEEEVLSLKE 250

Query: 298 LASRTL------KVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDF 351
           + +R +      +   +  +  H PQ + + L  +  C    C   F +  +E ++FVD 
Sbjct: 251 IGARYIMKELKDRWSYLRKAIRHYPQ-IKEMLAQSSKCA--VCGESFLNTWLECVRFVDA 307

Query: 352 CGKYR-------IPLLQYLCSSRCITNSPNVMYG 378
               +       IP+   LCS RC  +S +  YG
Sbjct: 308 REDLKLNNLSGLIPVRALLCSYRCFNSSGHDYYG 341



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 54/153 (35%), Positives = 85/153 (55%), Gaps = 5/153 (3%)

Query: 129 KVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
           K  NL   +L++ P  I  +  + +L L  N LN +P E++ L +L +L+LG N   ++P
Sbjct: 15  KALNLCNKKLDKVPKIIGKLDCVLHLQLRGNKLNTLPMELSHLFQLQILNLGNNEFEELP 74

Query: 189 DTFGDLYQLEALILSDNQLESL-PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
           +    L  LE L L +N+L++L P  ++NL+ L  L L++N L+T P EI    C    L
Sbjct: 75  EVLEYLTMLEKLHLFNNKLKTLAPKVLTNLRNLTFLNLNSNNLKTFPPEI----CRLSSL 130

Query: 248 KSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           + L + +N+L  LP EI  L  L E  + +N L
Sbjct: 131 QHLSVDSNQLTELPVEICALLRLEEFHVANNQL 163



 Score = 46.2 bits (108), Expect = 0.030,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 57/138 (41%), Gaps = 24/138 (17%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           N+  L L  NNL  FP    + ++L+ L + +N++T LP  I                  
Sbjct: 106 NLTFLNLNSNNLKTFPPEICRLSSLQHLSVDSNQLTELPVEIC----------------- 148

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
                   L  L+ F+++ NQL   P++   +  L+ LYL  N +  +P  + K  KL  
Sbjct: 149 -------ALLRLEEFHVANNQLTSLPLEFGFLVNLEKLYLQKNKIRELPESLGKCYKLRT 201

Query: 177 LSLGGNSLTDIPDTFGDL 194
           + +  N L   P     L
Sbjct: 202 VDIAANELRIFPTELSAL 219


>gi|332206768|ref|XP_003252466.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Nomascus leucogenys]
          Length = 860

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 121/225 (53%), Gaps = 10/225 (4%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L  N L  F ++     NL+ LDL  N+I  +P +I+N   L  LI R N    E+ P
Sbjct: 515 LELSENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILRCN--KFETFP 572

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
           +++  L+NL+V +LS NQL++    I ++  ++ L   +N   H P E+ +L  L  L++
Sbjct: 573 RELCTLENLQVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNI 632

Query: 180 G---GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
               G  LT +P    ++ QL+ L +S+N +  +P +I  L+ L SL  +NN++  LP  
Sbjct: 633 SQIKGRKLTRLPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAYNNQISYLPPS 692

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +++L      L+ L L  N L  LP+ I  L  L E++  DNPL+
Sbjct: 693 LLSLN----DLQQLNLSGNNLTALPSAIYNLFSLKEINFDDNPLL 733



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/272 (31%), Positives = 136/272 (50%), Gaps = 28/272 (10%)

Query: 16  SDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNA 75
           +DS   + ++ L    + L S  L ++I+LL          N+  L + HN++S  P   
Sbjct: 182 ADSGDLLGLEILSLQENGLSS--LPSEIQLL---------HNLRILNVSHNHISHIPKEI 230

Query: 76  SKFTNLRSLDLSNNRITHLP---QAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFN 132
           S+  N+R L   NN I + P   + + N  + +L  +N L     +P  + +LKNL+V N
Sbjct: 231 SQLGNIRQLFFYNNYIENFPSDLECLGNLEILSL-GKNKL---RHIPDTLPSLKNLRVLN 286

Query: 133 LSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFG 192
           L  NQL  FP  +  +P L  L L  N ++ +P+EI +L  L  L L  N LT +     
Sbjct: 287 LEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIRELKNLETLLLDHNKLTFLAVEIF 346

Query: 193 DLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI---ITLKCLSEKLKS 249
            L +++ L L+DN+LE +   I N + L+ L+L  N L+ +P +I     L+CLS     
Sbjct: 347 QLLRIKELQLADNKLEVISHKIENFRELRILILDKNLLKNIPEKISCCAMLECLS----- 401

Query: 250 LLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             L +NKL  LP  I  L  L +L +  N +V
Sbjct: 402 --LSDNKLTELPKNIHKLNNLRKLHVNRNNMV 431



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 112/225 (49%), Gaps = 8/225 (3%)

Query: 60  TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN--FPLSTLIARNNLLTAES 117
           T+ L    L  FP +  K   ++ L L  N+I     A +     L  L  + N L+  S
Sbjct: 145 TVNLEAKGLQEFPKDILKIKYVKYLYLDKNQIKTFQGADSGDLLGLEILSLQENGLS--S 202

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LP ++  L NL++ N+S N +   P +I  +  ++ L+  NN + + P ++  L  L +L
Sbjct: 203 LPSEIQLLHNLRILNVSHNHISHIPKEISQLGNIRQLFFYNNYIENFPSDLECLGNLEIL 262

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
           SLG N L  IPDT   L  L  L L  NQL   P ++  L  L SL L  N + +LP EI
Sbjct: 263 SLGKNKLRHIPDTLPSLKNLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEI 322

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
             LK     L++LLL +NKL  L  EI  L  + EL L DN L +
Sbjct: 323 RELK----NLETLLLDHNKLTFLAVEIFQLLRIKELQLADNKLEV 363



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 89/291 (30%), Positives = 130/291 (44%), Gaps = 42/291 (14%)

Query: 46  LPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN----- 100
           LP N +  K  N+  L +  NN+    D+ S   N+ SL+ S N IT +P  I N     
Sbjct: 410 LPKNIH--KLNNLRKLHVNRNNMVKITDSISHLNNICSLEFSGNIITGVPIEIKNCQKII 467

Query: 101 -----------FPLSTLIARNNLLT-------AESLPKDMSNLKNLKVFNLSGNQLEQFP 142
                      FPL  L A ++L            +P D+S  K L    LS N+L  F 
Sbjct: 468 KIELSYNKIMYFPLG-LCALDSLYYLNVNGNYISEIPVDISFSKQLLHLELSENKLLIFS 526

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
                +  LKYL LG N +  +P  I+ +  LHVL L  N     P     L  L+ L L
Sbjct: 527 EHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILRCNKFETFPRELCTLENLQVLDL 586

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
           S+NQL+ + + I NLK ++ L   +N+    P E+  L+ L E+L    +   KL  LP 
Sbjct: 587 SENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSL-EQLNISQIKGRKLTRLPG 645

Query: 263 EIITLKCLSELSLRDNPL--VIRFVSDM-------------TYKPPSLLEL 298
           E+  +  L EL + +N +  + R + ++             +Y PPSLL L
Sbjct: 646 ELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAYNNQISYLPPSLLSL 696



 Score = 70.9 bits (172), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/246 (28%), Positives = 111/246 (45%), Gaps = 30/246 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L L  N L   PD      NLR L+L  N++T  P+A+   P L +L    NL++ 
Sbjct: 258 NLEILSLGKNKLRHIPDTLPSLKNLRVLNLEYNQLTIFPKALCFLPKLISLDLTGNLIS- 316

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLN------------- 162
            SLPK++  LKNL+   L  N+L    ++I  +  +K L L +N L              
Sbjct: 317 -SLPKEIRELKNLETLLLDHNKLTFLAVEIFQLLRIKELQLADNKLEVISHKIENFRELR 375

Query: 163 ----------HVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
                     ++P +I+    L  LSL  N LT++P     L  L  L ++ N +  +  
Sbjct: 376 ILILDKNLLKNIPEKISCCAMLECLSLSDNKLTELPKNIHKLNNLRKLHVNRNNMVKITD 435

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSE 272
           SIS+L  + SL    N +  +P EI       +K+  + L  NK+   P  +  L  L  
Sbjct: 436 SISHLNNICSLEFSGNIITGVPIEIKN----CQKIIKIELSYNKIMYFPLGLCALDSLYY 491

Query: 273 LSLRDN 278
           L++  N
Sbjct: 492 LNVNGN 497



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 48/174 (27%), Positives = 84/174 (48%), Gaps = 10/174 (5%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLP------QAITNFPLSTLIAR 109
           EN+  L L  N L     +      ++ L+ S+N+  H P      Q++    +S +  R
Sbjct: 579 ENLQVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGR 638

Query: 110 NNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREIN 169
              LT   LP ++SN+  LK  ++S N + + P  I ++  L  L+  NN ++++P  + 
Sbjct: 639 K--LT--RLPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAYNNQISYLPPSLL 694

Query: 170 KLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL 223
            L  L  L+L GN+LT +P    +L+ L+ +   DN L   P  I   + L ++
Sbjct: 695 SLNDLQQLNLSGNNLTALPSAIYNLFSLKEINFDDNPLLRPPMEICKGRQLYTI 748



 Score = 51.2 bits (121), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 3/112 (2%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           L+  P   S  T L+ LD+SNN I  +P+ I     L +L A NN ++   LP  + +L 
Sbjct: 640 LTRLPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAYNNQISY--LPPSLLSLN 697

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           +L+  NLSGN L   P  I ++ +LK +   +N L   P EI K  +L+ ++
Sbjct: 698 DLQQLNLSGNNLTALPSAIYNLFSLKEINFDDNPLLRPPMEICKGRQLYTIA 749


>gi|417780635|ref|ZP_12428396.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
 gi|410779344|gb|EKR63961.1| leucine rich repeat protein [Leptospira weilii str. 2006001853]
          Length = 542

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 124/230 (53%), Gaps = 9/230 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLL 113
           +N+  L L  N L   P    +  NL++LDL +N++   P+ +     L  L ++ N L+
Sbjct: 65  QNLQELYLQWNQLIAIPKEIGQLQNLQTLDLRDNQLVTFPKEMVELQKLEMLDLSENRLI 124

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L++L+  +L  N+L   P +I  +  L+ L+   N L  +P+EI +L  
Sbjct: 125 I---LPAEIGLLQSLQSLSLYKNKLTTLPKEIGQLQNLQELWSPGNRLTTLPKEIGQLKN 181

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N LT +P   G L  L+ L L DNQL  LP  I  L+ L++L L NN+L T 
Sbjct: 182 LQTLNLANNRLTALPKEIGQLQNLQTLDLRDNQLIILPKEIGQLQNLQTLNLVNNRLTTF 241

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
           P EI  L    + L++L L NN+L T P EI  L+ L +L L  NPL ++
Sbjct: 242 PKEIGQL----QNLQTLNLVNNRLTTFPKEIGQLQNLRDLELLINPLSLK 287



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 98/188 (52%), Gaps = 19/188 (10%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N   ++V NLSG +L   P +I  +  L+ LYL  N L  +P+EI +L  
Sbjct: 30  TYTDLTKALQNPSKVRVLNLSGQELATLPKEIGQLQNLQELYLQWNQLIAIPKEIGQLQN 89

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L   P    +L +LE L LS+N+L  LPA I  L+ L+SL L+ NKL TL
Sbjct: 90  LQTLDLRDNQLVTFPKEMVELQKLEMLDLSENRLIILPAEIGLLQSLQSLSLYKNKLTTL 149

Query: 234 PTEIITLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           P EI  L+ L E                    L++L L NN+L  LP EI  L+ L  L 
Sbjct: 150 PKEIGQLQNLQELWSPGNRLTTLPKEIGQLKNLQTLNLANNRLTALPKEIGQLQNLQTLD 209

Query: 275 LRDNPLVI 282
           LRDN L+I
Sbjct: 210 LRDNQLII 217



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 106/313 (33%), Positives = 146/313 (46%), Gaps = 55/313 (17%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-----------PLS 104
           +N+ TL L +N L+ FP    +  NL++L+L NNR+T  P+ I              PLS
Sbjct: 226 QNLQTLNLVNNRLTTFPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLRDLELLINPLS 285

Query: 105 TLIARNNL--------LTAESLPKD-------MSNLKNLKVFNLS-----GNQLEQFPIQ 144
            L  R  +        L    + KD       ++  + L+V  LS      +QL  FP +
Sbjct: 286 -LKERKRIQKLFPNSNLDLREVAKDGVYHNLNLAQEEPLQVLELSIAYKSFSQL--FPKE 342

Query: 145 ILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD 204
           IL    L+ LYL +     VP+EI +L  L  L LG N L ++P T G L  L  L L  
Sbjct: 343 ILKFRNLQSLYLYDCGFPTVPKEIGRLKNLKYLLLGLNGLHNLPSTIGQLRNLRGLNLEA 402

Query: 205 NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL-------------KCLSEKLKSLL 251
           N LESLP  I+ L+ L +L LH NKL+T P EI+ L             K L EKL+ L 
Sbjct: 403 NLLESLPKEIARLRNLHTLRLHQNKLKTFPKEILQLGKLQKLDLSANELKILPEKLERLQ 462

Query: 252 ------LHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTY-KPPSLLELASRTLK 304
                 L +N+L  LP EI  L+ L EL L  N L     S++ + K   +L L      
Sbjct: 463 NLQELDLSHNQLTILPKEIAKLQNLQELHLNGNQLTT-LPSEIGFLKKLKILRLYQNEFS 521

Query: 305 VHEIDYSQEHLPQ 317
             E +  Q+ LP+
Sbjct: 522 SEEKERIQKLLPK 534



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 4/112 (3%)

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           +C+L    +   + TD+     +  ++  L LS  +L +LP  I  L+ L+ L L  N+L
Sbjct: 18  ICELQAEEVEQGTYTDLTKALQNPSKVRVLNLSGQELATLPKEIGQLQNLQELYLQWNQL 77

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
             +P EI  L    + L++L L +N+L T P E++ L+ L  L L +N L+I
Sbjct: 78  IAIPKEIGQL----QNLQTLDLRDNQLVTFPKEMVELQKLEMLDLSENRLII 125


>gi|62079263|ref|NP_001014290.1| leucine-rich repeat-containing protein 1 [Rattus norvegicus]
 gi|50925909|gb|AAH79423.1| Leucine rich repeat containing 1 [Rattus norvegicus]
          Length = 524

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/242 (37%), Positives = 130/242 (53%), Gaps = 23/242 (9%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I  LP++I     L  L    N L+ 
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLS- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NL+NL   ++S N+LE+ P +I  + +L  L +  N L  VP  I KL KL 
Sbjct: 211 -ELPQEIGNLRNLLCLDVSENRLERLPEEISGLISLTDLVVSQNLLETVPDGIGKLKKLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L L  N LT +P+  GD   L  L+L++N+L +LP SI  LK L +L    NKL +LP 
Sbjct: 270 ILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPTSIGKLKKLNNLNADRNKLVSLPK 329

Query: 236 EI-----ITLKCL---------SEKLKSLLLH-----NNKLRTLPTEIITLKCLSELSLR 276
           EI     +T+ C+         SE  +++ LH      N+L  LP  + TLK L  L L 
Sbjct: 330 EIGGCCSLTVFCIRDNRLTRIPSEVSQAMELHVLDVAGNRLHHLPLSLTTLK-LKALWLS 388

Query: 277 DN 278
           DN
Sbjct: 389 DN 390



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 115/223 (51%), Gaps = 9/223 (4%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTA 115
           ++ LLL  N L   P+   +   LR L LS+N +  LP  I NF  L  L ++RN++   
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEVQRLPPEIANFMQLVELDVSRNDI--- 94

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+ +S  K L+V + SGN L + P    ++  L  L + + SL  +P  I  L  L 
Sbjct: 95  PEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLA 154

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +PD+   L +LE L L +N++ SLP SI  L  LK L L  N+L  LP 
Sbjct: 155 SLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLSELPQ 214

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           EI  L+     L  L +  N+L  LP EI  L  L++L +  N
Sbjct: 215 EIGNLR----NLLCLDVSENRLERLPEEISGLISLTDLVVSQN 253



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 141/291 (48%), Gaps = 28/291 (9%)

Query: 40  ATQIELLPNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITH 93
           A Q+     N   + PE      N+  L +   +L   P+N     NL SL+L  N +T+
Sbjct: 106 ALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTY 165

Query: 94  LPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
           LP ++T    L  L   NN +   SLP+ +  L +LK   L GNQL + P +I ++  L 
Sbjct: 166 LPDSLTQLRRLEELDLGNNEIY--SLPESIGALLHLKDLWLDGNQLSELPQEIGNLRNLL 223

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            L +  N L  +P EI+ L  L  L +  N L  +PD  G L +L  L L  N+L  LP 
Sbjct: 224 CLDVSENRLERLPEEISGLISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPE 283

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSE 272
           +I + + L  L+L  N+L TLPT I  LK    KL +L    NKL +LP EI     L+ 
Sbjct: 284 AIGDCENLTELVLTENRLLTLPTSIGKLK----KLNNLNADRNKLVSLPKEIGGCCSLTV 339

Query: 273 LSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQ---EHLPQNLV 320
             +RDN L  R  S++           S+ +++H +D +     HLP +L 
Sbjct: 340 FCIRDNRLT-RIPSEV-----------SQAMELHVLDVAGNRLHHLPLSLT 378



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 124/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N++   P++ S    L+  D S N +T LP++  
Sbjct: 66  LSDNEVQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 126 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            +  +P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 185 EIYSLPESIGALLHLKDLWLDGNQLSELPQEIGNLRNLLCLDVSENRLERLPEEISGLIS 244

Query: 220 LKSLLLHNNKLRTLP-------------------TEIITLKCLSEKLKSLLLHNNKLRTL 260
           L  L++  N L T+P                   T++       E L  L+L  N+L TL
Sbjct: 245 LTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTL 304

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           PT I  LK L+ L+   N LV
Sbjct: 305 PTSIGKLKKLNNLNADRNKLV 325



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 96/218 (44%), Gaps = 29/218 (13%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN+    PE+I  LL      L  N LS  P       NL  LD+S NR+  LP+ I+
Sbjct: 181 LGNNEIYSLPESIGALLHLKDLWLDGNQLSELPQEIGNLRNLLCLDVSENRLERLPEEIS 240

Query: 100 NF-PLSTLIARNNLLTA---------------------ESLPKDMSNLKNLKVFNLSGNQ 137
               L+ L+   NLL                         LP+ + + +NL    L+ N+
Sbjct: 241 GLISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENR 300

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           L   P  I  +  L  L    N L  +P+EI   C L V  +  N LT IP       +L
Sbjct: 301 LLTLPTSIGKLKKLNNLNADRNKLVSLPKEIGGCCSLTVFCIRDNRLTRIPSEVSQAMEL 360

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
             L ++ N+L  LP S++ LK LK+L L +N+ + L T
Sbjct: 361 HVLDVAGNRLHHLPLSLTTLK-LKALWLSDNQSQPLLT 397



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 8/203 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ ++D  +  + ++P+ I  +   L  L+   N L    LP+    L  L+   LS N+
Sbjct: 13  HVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQL--RELPEQFFQLVKLRKLGLSDNE 70

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           +++ P +I +   L  L +  N +  +P  I+    L V    GN LT +P++F +L  L
Sbjct: 71  VQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNL 130

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
             L ++D  L+SLP +I NL  L SL L  N L  LP  +  L+    +L+ L L NN++
Sbjct: 131 TCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLR----RLEELDLGNNEI 186

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
            +LP  I  L  L +L L  N L
Sbjct: 187 YSLPESIGALLHLKDLWLDGNQL 209


>gi|260788664|ref|XP_002589369.1| hypothetical protein BRAFLDRAFT_77815 [Branchiostoma floridae]
 gi|229274546|gb|EEN45380.1| hypothetical protein BRAFLDRAFT_77815 [Branchiostoma floridae]
          Length = 869

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 83/285 (29%), Positives = 139/285 (48%), Gaps = 23/285 (8%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L + +N LS FP    K   LR L +++N++T +P  + + P L  L    N +  
Sbjct: 388 NLEMLSVCNNKLSTFPPGVEKLQKLRKLYINDNQLTEVPSCVCSLPNLEVLSVGPNPI-- 445

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP D++ L  LK  ++ G Q ++FP Q+L + TL+ LY G    + VP E+  L  L 
Sbjct: 446 RRLPDDVTRLARLKTLSVPGCQFDEFPRQVLQLKTLEELYAGGCKFDIVPDEVGNLQHLW 505

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            LSL  N L  +P T   L+ L  + L+ N+ ++ P  +  L  ++ L + NN +  LPT
Sbjct: 506 HLSLDINLLRTLPSTMSHLHNLRVVRLNKNKFDTFPEVLCELPAMEKLNIRNNNITRLPT 565

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI------ITLKCLSELSLRDNPLVIRF----- 284
            +      ++KLK L +  N +   P E+        +  L + + +D  ++  F     
Sbjct: 566 ALHR----ADKLKDLNVSGNPMSYPPQEVRKQGTGAIMAFLKQEAEKDERILSAFNRLSV 621

Query: 285 -VSDMTYKP-PSLLELASR---TLKVHEIDYSQEHLPQNLVQYLE 324
            +S   +KP    L L++R    +KV   D   + + Q LVQ+ E
Sbjct: 622 RMSQTQWKPLARSLGLSNRAVDAIKVSAPDDVPDQVYQTLVQWRE 666



 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 80/264 (30%), Positives = 130/264 (49%), Gaps = 35/264 (13%)

Query: 52  NKKPENIDTLL---LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLI 107
           N +P+ ++  L   L +  L+  P+     T+L  LD+S N++T +P+AI     LS L 
Sbjct: 21  NLQPQTVNGRLKLDLSNQGLTSIPEEVFDITDLEFLDVSRNKLTSIPEAIGRLQKLSRLD 80

Query: 108 ARNNLLTA---------------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQIL 146
           A +N+LT                       +LP  +  L+ L + ++  NQL + P  + 
Sbjct: 81  AYSNMLTCLPQAIGSLQKLTHLYVYRNKLANLPPGIEKLQKLTLLSIYDNQLTEVPSGVC 140

Query: 147 DIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQ 206
            +P L+ L + NN L+  P  + KL KL  L +  N LT++P     L  LE L +S+N+
Sbjct: 141 SLPNLEVLSVSNNKLSTFPPGVEKLQKLRKLFIKDNQLTEVPSGVCSLPNLEVLNVSNNK 200

Query: 207 LESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS------EKLKS----LLLHNNK 256
           L + P  +  L+ LK L +++N+L  +P+ + +L  L        KL +    +  HNNK
Sbjct: 201 LSTFPPGVEKLQKLKELGIYDNQLTEVPSGVCSLPNLEVLNVYNNKLSTFPPGVKCHNNK 260

Query: 257 LRTLPTEIITLKCLSELSLRDNPL 280
           L T P  +  L+ L EL + DN L
Sbjct: 261 LSTFPPGVEKLQKLKELGIYDNQL 284



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 118/237 (49%), Gaps = 17/237 (7%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L + +N LS FP    K   L+ L + +N++T +P  + + P L  L   NN L+ 
Sbjct: 190 NLEVLNVSNNKLSTFPPGVEKLQKLKELGIYDNQLTEVPSGVCSLPNLEVLNVYNNKLST 249

Query: 116 ------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNH 163
                        + P  +  L+ LK   +  NQL + P  +  +P L+ L   NN L+ 
Sbjct: 250 FPPGVKCHNNKLSTFPPGVEKLQKLKELGIYDNQLTEVPSGVCSLPNLEKLSAYNNKLST 309

Query: 164 VPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL 223
            P  + KL KL  L +  N LT++P     L  LE L + +N+L + P  +  L+ L+ L
Sbjct: 310 FPPGVEKLQKLRELYIYDNQLTEVPSGVCSLPNLEMLGVYNNKLSTFPPGVEKLQKLREL 369

Query: 224 LLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            +++N+L  +P+ + +L      L+ L + NNKL T P  +  L+ L +L + DN L
Sbjct: 370 YIYDNQLTEVPSGVCSLP----NLEMLSVCNNKLSTFPPGVEKLQKLRKLYINDNQL 422



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 69/220 (31%), Positives = 108/220 (49%), Gaps = 7/220 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L  Y+N LS FP    K   LR L + +N++T +P  + + P L  L   NN L+ 
Sbjct: 296 NLEKLSAYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPSGVCSLPNLEMLGVYNNKLS- 354

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            + P  +  L+ L+   +  NQL + P  +  +P L+ L + NN L+  P  + KL KL 
Sbjct: 355 -TFPPGVEKLQKLRELYIYDNQLTEVPSGVCSLPNLEMLSVCNNKLSTFPPGVEKLQKLR 413

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L +  N LT++P     L  LE L +  N +  LP  ++ L  LK+L +   +    P 
Sbjct: 414 KLYINDNQLTEVPSCVCSLPNLEVLSVGPNPIRRLPDDVTRLARLKTLSVPGCQFDEFPR 473

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
           +++ LK L E    L     K   +P E+  L+ L  LSL
Sbjct: 474 QVLQLKTLEE----LYAGGCKFDIVPDEVGNLQHLWHLSL 509



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/222 (28%), Positives = 109/222 (49%), Gaps = 7/222 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNN 111
           +K + +  L +Y N L+  P       NL  L   NN+++  P  +     L  L   +N
Sbjct: 269 EKLQKLKELGIYDNQLTEVPSGVCSLPNLEKLSAYNNKLSTFPPGVEKLQKLRELYIYDN 328

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT   +P  + +L NL++  +  N+L  FP  +  +  L+ LY+ +N L  VP  +  L
Sbjct: 329 QLT--EVPSGVCSLPNLEMLGVYNNKLSTFPPGVEKLQKLRELYIYDNQLTEVPSGVCSL 386

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L +LS+  N L+  P     L +L  L ++DNQL  +P+ + +L  L+ L +  N +R
Sbjct: 387 PNLEMLSVCNNKLSTFPPGVEKLQKLRKLYINDNQLTEVPSCVCSLPNLEVLSVGPNPIR 446

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            LP ++  L     +LK+L +   +    P +++ LK L EL
Sbjct: 447 RLPDDVTRLA----RLKTLSVPGCQFDEFPRQVLQLKTLEEL 484



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 67/227 (29%), Positives = 107/227 (47%), Gaps = 7/227 (3%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNN 111
           +K + +  L +Y N L+  P       NL  L + NN+++  P  +     L  L   +N
Sbjct: 315 EKLQKLRELYIYDNQLTEVPSGVCSLPNLEMLGVYNNKLSTFPPGVEKLQKLRELYIYDN 374

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT   +P  + +L NL++ ++  N+L  FP  +  +  L+ LY+ +N L  VP  +  L
Sbjct: 375 QLT--EVPSGVCSLPNLEMLSVCNNKLSTFPPGVEKLQKLRKLYINDNQLTEVPSCVCSL 432

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L VLS+G N +  +PD    L +L+ L +   Q +  P  +  LK L+ L     K  
Sbjct: 433 PNLEVLSVGPNPIRRLPDDVTRLARLKTLSVPGCQFDEFPRQVLQLKTLEELYAGGCKFD 492

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            +P E+  L    + L  L L  N LRTLP+ +  L  L  + L  N
Sbjct: 493 IVPDEVGNL----QHLWHLSLDINLLRTLPSTMSHLHNLRVVRLNKN 535


>gi|320169123|gb|EFW46022.1| leucine-rich repeat-containing protein 28 [Capsaspora owczarzaki
           ATCC 30864]
          Length = 1067

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 130/288 (45%), Gaps = 46/288 (15%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L HN L+  P    + T L  LDLS N +T LP +I     L     + N LT   LP
Sbjct: 59  LKLSHNELTSVPATIGQLTELTLLDLSYNNLTELPDSIGRLRKLKRFDVKRNQLT--ELP 116

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             MS + +L       NQL+ FPI +  +P L+ L L NN +  +P  I  + +L  L+L
Sbjct: 117 DSMSGMVSLYRLRAVDNQLKAFPIALCQLPALEKLDLSNNKITELPAAIGNMPRLVKLTL 176

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN----------------------- 216
             N LT +PD    L  L  L +S N++  LP ++S                        
Sbjct: 177 DKNLLTSLPDAICLLVNLRQLTISRNRILDLPHNVSQLHHMISVPWYASSLVSFPPHLLE 236

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLK-------------------CLSEKLKSLLLHNNKL 257
           L+ ++ L L  N L ++P EI+ LK                   C+  KL SL L  N +
Sbjct: 237 LRNVRQLDLSRNNLTSIPPEILELKYLEKLNLRSNQIREIPLHLCMLRKLTSLDLGKNMI 296

Query: 258 RTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKV 305
            T P E + L+ L +L +  NPL  +F +    + P+L ELA+R + V
Sbjct: 297 TTFPYEFLALRHLDDLKIVGNPLKTKFTA-RAVRIPTLKELAARQVLV 343



 Score = 72.8 bits (177), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 113/240 (47%), Gaps = 31/240 (12%)

Query: 106 LIARNNLLTAESLPKD-MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHV 164
           L   +NLLT  +LP + +  L  L    LS N+L   P  I  +  L  L L  N+L  +
Sbjct: 35  LYVSHNLLT--TLPSEGLGRLHALVHLKLSHNELTSVPATIGQLTELTLLDLSYNNLTEL 92

Query: 165 PREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLL 224
           P  I +L KL    +  N LT++PD+   +  L  L   DNQL++ P ++  L  L+ L 
Sbjct: 93  PDSIGRLRKLKRFDVKRNQLTELPDSMSGMVSLYRLRAVDNQLKAFPIALCQLPALEKLD 152

Query: 225 LHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL---- 280
           L NNK+  LP  I  +     +L  L L  N L +LP  I  L  L +L++  N +    
Sbjct: 153 LSNNKITELPAAIGNMP----RLVKLTLDKNLLTSLPDAICLLVNLRQLTISRNRILDLP 208

Query: 281 -----------VIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHL----PQNL-VQYLE 324
                      V  + S +   PP LLEL +    V ++D S+ +L    P+ L ++YLE
Sbjct: 209 HNVSQLHHMISVPWYASSLVSFPPHLLELRN----VRQLDLSRNNLTSIPPEILELKYLE 264



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/142 (33%), Positives = 74/142 (52%), Gaps = 5/142 (3%)

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INKLCKLHVLSLGGNSLTDIPDTFGDLYQ 196
           L  F   I+ +  ++YLY+ +N L  +P E + +L  L  L L  N LT +P T G L +
Sbjct: 19  LWDFVADIVKLKHIQYLYVSHNLLTTLPSEGLGRLHALVHLKLSHNELTSVPATIGQLTE 78

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
           L  L LS N L  LP SI  L+ LK   +  N+L  LP  +  +  L  +L+++   +N+
Sbjct: 79  LTLLDLSYNNLTELPDSIGRLRKLKRFDVKRNQLTELPDSMSGMVSL-YRLRAV---DNQ 134

Query: 257 LRTLPTEIITLKCLSELSLRDN 278
           L+  P  +  L  L +L L +N
Sbjct: 135 LKAFPIALCQLPALEKLDLSNN 156



 Score = 52.4 bits (124), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 44/74 (59%), Gaps = 2/74 (2%)

Query: 295 LLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGK 354
           +L +++  ++   I Y ++ + ++LV+YL SA  C N  C G F  +++E I+F +    
Sbjct: 537 VLAVSALGVRCRIIPYERDDISEDLVEYLASARACTN--CGGPFIQSKMEVIEFHENSQN 594

Query: 355 YRIPLLQYLCSSRC 368
            R+PLL+ LC + C
Sbjct: 595 QRLPLLKTLCGTAC 608


>gi|311259185|ref|XP_003127976.1| PREDICTED: leucine-rich repeat-containing protein 40-like [Sus
           scrofa]
          Length = 602

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 124/224 (55%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSF-FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           N+D     + NLSF   +   + T+L  L +SNN++  L   +   P L+ L   +N LT
Sbjct: 59  NVDIPEEANQNLSFSATERWWEQTDLTKLIISNNKLQSLSDDLRLLPALTVLDIHDNQLT 118

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLP  +  L+NL+  N+S N+L+  P +I ++  LK LYL +N L  +P    +L  L
Sbjct: 119 --SLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKGLYLQHNELTCIPEGFEQLFNL 176

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L+ IP +F  L  +  L +S NQL+SLPA IS +K LK L  ++N L T+P
Sbjct: 177 EDLDLSNNRLSSIPASFSSLSSVVRLNISSNQLKSLPAEISGMKRLKHLDCNSNLLETIP 236

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            E+ ++    E L+ L L  NKLR LP E  + K L EL + +N
Sbjct: 237 PELASM----ESLELLYLRRNKLRFLP-EFPSCKLLKELHVGEN 275



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 89/272 (32%), Positives = 129/272 (47%), Gaps = 49/272 (18%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           ++++LP    N +  N+  L L HN L+  P+   +  NL  LDLSNNR++ +P + ++ 
Sbjct: 139 KLKILPEEITNLR--NLKGLYLQHNELTCIPEGFEQLFNLEDLDLSNNRLSSIPASFSSL 196

Query: 102 PLSTLIARNNLLTAE--SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
              + + R N+ + +  SLP ++S +K LK  + + N LE  P ++  + +L+ LYL  N
Sbjct: 197 ---SSVVRLNISSNQLKSLPAEISGMKRLKHLDCNSNLLETIPPELASMESLELLYLRRN 253

Query: 160 SLNHVPR---------------EINKLCKLH--------VLSLGGNSLTDIPDTFGDLYQ 196
            L  +P                +I  L   H        VL L  N L  +PD    L  
Sbjct: 254 KLRFLPEFPSCKLLKELHVGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQS 313

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII------TLKCLSEKLKSL 250
           LE L LS+N + SLP S+  L  LK L L  N LRT+  EII       LK L  K+K  
Sbjct: 314 LERLDLSNNDISSLPCSLGKLH-LKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIKDD 372

Query: 251 LLHNN-----KLRTLPTE-------IITLKCL 270
            L  +        TLP+E       IITLK L
Sbjct: 373 GLSQSDCVTETAMTLPSESRVNIHAIITLKTL 404



 Score = 87.8 bits (216), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 121/229 (52%), Gaps = 14/229 (6%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLT 114
           EN+  L + HN L   P+  +   NL+ L L +N +T +P+     F L  L   NN L+
Sbjct: 128 ENLQKLNVSHNKLKILPEEITNLRNLKGLYLQHNELTCIPEGFEQLFNLEDLDLSNNRLS 187

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             S+P   S+L ++   N+S NQL+  P +I  +  LK+L   +N L  +P E+  +  L
Sbjct: 188 --SIPASFSSLSSVVRLNISSNQLKSLPAEISGMKRLKHLDCNSNLLETIPPELASMESL 245

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLL---LHNNKLR 231
            +L L  N L  +P+ F     L+ L + +NQ+E L A   +LK L S+L   L +NKL+
Sbjct: 246 ELLYLRRNKLRFLPE-FPSCKLLKELHVGENQIEMLGA--EHLKHLNSILVLDLRDNKLK 302

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           ++P EI  L    + L+ L L NN + +LP  +  L  L  L+L  NPL
Sbjct: 303 SVPDEITLL----QSLERLDLSNNDISSLPCSLGKLH-LKFLALEGNPL 346



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 101/199 (50%), Gaps = 9/199 (4%)

Query: 74  NASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE--SLPKDMSNLKNL-KV 130
           N      L++LD S+ +   +P  + +   S +I   N    +   +PK +  +K +   
Sbjct: 394 NIHAIITLKTLDYSDKQTALIPDEVFDAVKSNVITSVNFSKNQLCEIPKRIVEMKEMVSD 453

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NLS N+L    +++  +  L +L L NN LN +P E+  L +L  ++L  N    +P+ 
Sbjct: 454 VNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKILPEV 513

Query: 191 FGDLYQLEALILSDNQLESL-PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
              +  LE +++S+NQ+ S+ P  +  ++ L +L L NN L  +P E+    C++  L++
Sbjct: 514 LYRIPTLETILISNNQVGSVDPQKMKTMENLITLDLQNNDLLQIPPELGN--CVN--LRT 569

Query: 250 LLLHNNKLRTLPTEIITLK 268
           LLL  N  R +P   I +K
Sbjct: 570 LLLDGNPFR-VPRAAILMK 587



 Score = 49.3 bits (116), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 128/283 (45%), Gaps = 17/283 (6%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           QIE+L   ++ K   +I  L L  N L   PD  +   +L  LDLSNN I+ LP ++   
Sbjct: 276 QIEML-GAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGKL 334

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L  L    N L   ++ +++ N    +V     ++++   +   D  T   + L + S 
Sbjct: 335 HLKFLALEGNPL--RTIRREIINKGTQEVLKYLRSKIKDDGLSQSDCVTETAMTLPSESR 392

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQ---LEALILSDNQLESLPASISNLK 218
            +    I+ +  L  L         IPD   D  +   + ++  S NQL  +P  I  +K
Sbjct: 393 VN----IHAIITLKTLDYSDKQTALIPDEVFDAVKSNVITSVNFSKNQLCEIPKRIVEMK 448

Query: 219 -MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRD 277
            M+  + L  NKL  +  E+    C+ +KL  L L NN L +LP E+ +L  L  ++L  
Sbjct: 449 EMVSDVNLSFNKLSFISLEL----CMLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSF 504

Query: 278 NPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLV 320
           N    + + ++ Y+ P+L  +     +V  +D  +    +NL+
Sbjct: 505 NRF--KILPEVLYRIPTLETILISNNQVGSVDPQKMKTMENLI 545



 Score = 43.5 bits (101), Expect = 0.18,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 3/105 (2%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L +N L+  P+       L++++LS NR   LP+ +   P L T++  NN + +   P+ 
Sbjct: 479 LRNNFLNSLPEEMESLVRLQTINLSFNRFKILPEVLYRIPTLETILISNNQVGSVD-PQK 537

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPR 166
           M  ++NL   +L  N L Q P ++ +   L+ L L  N    VPR
Sbjct: 538 MKTMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPF-RVPR 581


>gi|440804214|gb|ELR25091.1| Leucinerich repeat protein lrrA, putative [Acanthamoeba castellanii
           str. Neff]
          Length = 507

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/240 (31%), Positives = 114/240 (47%), Gaps = 22/240 (9%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLST---LIARNNLLTAES 117
           L+L  N+++  PD   K   +  LDL NNRI H+P A+ +   +     +  N L     
Sbjct: 42  LILAENDITSLPDELGKLARIEVLDLGNNRINHVPPALGDLAPTLRELWLCNNKLFFTAP 101

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           L  ++  L+ L+  +LSGNQLE+ P ++  +  L+YL +  N+L   P E   L  L + 
Sbjct: 102 LTPNLGKLRLLQKLDLSGNQLEELPAELGQLSALQYLDISGNNLQVFPPEFGNLRALLIF 161

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
               N L  +    G+L +L    L++N L  LP  I NL+ L+   L NNKL+ LP E+
Sbjct: 162 KAENNRLRALAPEVGNLTELSEWYLANNALSRLPPQIGNLRNLQVFDLSNNKLQDLPAEM 221

Query: 238 ITLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             L  L                     +L+ + L N  L  LP ++ TL  + EL LR+N
Sbjct: 222 GYLARLRSFSVNENSNLKTLFPLEQLNQLQYMGLRNTLLDELPEDLCTLPSIVELDLRNN 281



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 86/243 (35%), Positives = 119/243 (48%), Gaps = 33/243 (13%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI------------------TNFPLS 104
           L +N LS  P       NL+  DLSNN++  LP  +                  T FPL 
Sbjct: 186 LANNALSRLPPQIGNLRNLQVFDLSNNKLQDLPAEMGYLARLRSFSVNENSNLKTLFPLE 245

Query: 105 TL------IARNNLLTAESLPKDMSNLKNLKVFNLSGN-QLEQFPIQILDIPTLKYLYLG 157
            L        RN LL  + LP+D+  L ++   +L  N Q+ + P +I  + TL+ L L 
Sbjct: 246 QLNQLQYMGLRNTLL--DELPEDLCTLPSIVELDLRNNLQIGRIPPEIGRLTTLRRLDLF 303

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTD--IPDTFGDLYQLEALILSDNQLESLPASIS 215
            N L ++P EI  L  L +L L  NSL    IP   G L +LE L++S N L +LPA I 
Sbjct: 304 GNKLTNLPAEIGNLVNLELLDLRQNSLAIELIPPELGRLTRLERLLMSKNNLATLPAEIK 363

Query: 216 NLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
            +  LK L   NN L ++P EI    CLS  L+ L +  N+L TLP  I  L  L++L +
Sbjct: 364 TMYALKELDAANNVLLSVPEEI---GCLS-NLQKLNVSGNRLLTLPPTIALLTALTKLDI 419

Query: 276 RDN 278
           + N
Sbjct: 420 KGN 422



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 70/219 (31%), Positives = 105/219 (47%), Gaps = 12/219 (5%)

Query: 55  PENIDTL-----LLYHNNLSF--FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL 106
           PE++ TL     L   NNL     P    + T LR LDL  N++T+LP  I N   L  L
Sbjct: 264 PEDLCTLPSIVELDLRNNLQIGRIPPEIGRLTTLRRLDLFGNKLTNLPAEIGNLVNLELL 323

Query: 107 IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPR 166
             R N L  E +P ++  L  L+   +S N L   P +I  +  LK L   NN L  VP 
Sbjct: 324 DLRQNSLAIELIPPELGRLTRLERLLMSKNNLATLPAEIKTMYALKELDAANNVLLSVPE 383

Query: 167 EINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLH 226
           EI  L  L  L++ GN L  +P T   L  L  L +  N++  LP+ +  L  +  + + 
Sbjct: 384 EIGCLSNLQKLNVSGNRLLTLPPTIALLTALTKLDIKGNEIHELPSEVGELSSVVKIDMS 443

Query: 227 NNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
           +N +  LP E+ +L     KL+ + + +N L   P +++
Sbjct: 444 HNMMTNLPWELGSLP----KLEVMDISHNPLVIPPPDVL 478



 Score = 65.9 bits (159), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 51/163 (31%), Positives = 84/163 (51%), Gaps = 5/163 (3%)

Query: 57  NIDTLLLYHNNLS--FFPDNASKFTNLRSLDLSNNRITHLPQAI-TNFPLSTLIARNNLL 113
           N++ L L  N+L+    P    + T L  L +S N +  LP  I T + L  L A NN+L
Sbjct: 319 NLELLDLRQNSLAIELIPPELGRLTRLERLLMSKNNLATLPAEIKTMYALKELDAANNVL 378

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
              S+P+++  L NL+  N+SGN+L   P  I  +  L  L +  N ++ +P E+ +L  
Sbjct: 379 L--SVPEEIGCLSNLQKLNVSGNRLLTLPPTIALLTALTKLDIKGNEIHELPSEVGELSS 436

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
           +  + +  N +T++P   G L +LE + +S N L   P  + N
Sbjct: 437 VVKIDMSHNMMTNLPWELGSLPKLEVMDISHNPLVIPPPDVLN 479


>gi|149019124|gb|EDL77765.1| similar to RIKEN cDNA A430093J20 gene, isoform CRA_b [Rattus
           norvegicus]
          Length = 524

 Score =  102 bits (255), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 90/242 (37%), Positives = 130/242 (53%), Gaps = 23/242 (9%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I  LP++I     L  L    N L+ 
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLS- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NL+NL   ++S N+LE+ P +I  + +L  L +  N L  VP  I KL KL 
Sbjct: 211 -ELPQEIGNLRNLLCLDVSENRLERLPEEISGLISLTDLVVSQNLLETVPDGIGKLKKLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L L  N LT +P+  GD   L  L+L++N+L +LP SI  LK L +L    NKL +LP 
Sbjct: 270 ILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPTSIGKLKKLNNLNADRNKLVSLPK 329

Query: 236 EI-----ITLKCL---------SEKLKSLLLH-----NNKLRTLPTEIITLKCLSELSLR 276
           EI     +T+ C+         SE  +++ LH      N+L  LP  + TLK L  L L 
Sbjct: 330 EIGGCCSLTVFCIRDNRLTRIPSEVSQAMELHVLDVAGNRLHHLPLSLTTLK-LKALWLS 388

Query: 277 DN 278
           DN
Sbjct: 389 DN 390



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 115/223 (51%), Gaps = 9/223 (4%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTA 115
           ++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN++   
Sbjct: 38  LEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDI--- 94

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+ +S  K L+V + SGN L + P    ++  L  L + + SL  +P  I  L  L 
Sbjct: 95  PEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLA 154

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +PD+   L +LE L L +N++ SLP SI  L  LK L L  N+L  LP 
Sbjct: 155 SLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLSELPQ 214

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           EI  L+     L  L +  N+L  LP EI  L  L++L +  N
Sbjct: 215 EIGNLR----NLLCLDVSENRLERLPEEISGLISLTDLVVSQN 253



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 141/291 (48%), Gaps = 28/291 (9%)

Query: 40  ATQIELLPNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITH 93
           A Q+     N   + PE      N+  L +   +L   P+N     NL SL+L  N +T+
Sbjct: 106 ALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTY 165

Query: 94  LPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
           LP ++T    L  L   NN +   SLP+ +  L +LK   L GNQL + P +I ++  L 
Sbjct: 166 LPDSLTQLRRLEELDLGNNEIY--SLPESIGALLHLKDLWLDGNQLSELPQEIGNLRNLL 223

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            L +  N L  +P EI+ L  L  L +  N L  +PD  G L +L  L L  N+L  LP 
Sbjct: 224 CLDVSENRLERLPEEISGLISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPE 283

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSE 272
           +I + + L  L+L  N+L TLPT I  LK    KL +L    NKL +LP EI     L+ 
Sbjct: 284 AIGDCENLTELVLTENRLLTLPTSIGKLK----KLNNLNADRNKLVSLPKEIGGCCSLTV 339

Query: 273 LSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQ---EHLPQNLV 320
             +RDN L  R  S++           S+ +++H +D +     HLP +L 
Sbjct: 340 FCIRDNRLT-RIPSEV-----------SQAMELHVLDVAGNRLHHLPLSLT 378



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 124/261 (47%), Gaps = 26/261 (9%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      +  N++   P++ S    L+  D S N +T LP++  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + +SLP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 126 ELQNLTCLSVNDI-SLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            +  +P  I  L  L  L L GN L+++P   G+L  L  L +S+N+LE LP  IS L  
Sbjct: 185 EIYSLPESIGALLHLKDLWLDGNQLSELPQEIGNLRNLLCLDVSENRLERLPEEISGLIS 244

Query: 220 LKSLLLHNNKLRTLP-------------------TEIITLKCLSEKLKSLLLHNNKLRTL 260
           L  L++  N L T+P                   T++       E L  L+L  N+L TL
Sbjct: 245 LTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTL 304

Query: 261 PTEIITLKCLSELSLRDNPLV 281
           PT I  LK L+ L+   N LV
Sbjct: 305 PTSIGKLKKLNNLNADRNKLV 325



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 96/218 (44%), Gaps = 29/218 (13%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN+    PE+I  LL      L  N LS  P       NL  LD+S NR+  LP+ I+
Sbjct: 181 LGNNEIYSLPESIGALLHLKDLWLDGNQLSELPQEIGNLRNLLCLDVSENRLERLPEEIS 240

Query: 100 NF-PLSTLIARNNLLTA---------------------ESLPKDMSNLKNLKVFNLSGNQ 137
               L+ L+   NLL                         LP+ + + +NL    L+ N+
Sbjct: 241 GLISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENR 300

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           L   P  I  +  L  L    N L  +P+EI   C L V  +  N LT IP       +L
Sbjct: 301 LLTLPTSIGKLKKLNNLNADRNKLVSLPKEIGGCCSLTVFCIRDNRLTRIPSEVSQAMEL 360

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
             L ++ N+L  LP S++ LK LK+L L +N+ + L T
Sbjct: 361 HVLDVAGNRLHHLPLSLTTLK-LKALWLSDNQSQPLLT 397



 Score = 76.3 bits (186), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 63/203 (31%), Positives = 102/203 (50%), Gaps = 8/203 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ ++D  +  + ++P+ I  +   L  L+   N L    LP+    L  L+   LS N+
Sbjct: 13  HVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQL--RELPEQFFQLVKLRKLGLSDNE 70

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           +++ P +I +   L  L +  N +  +P  I+    L V    GN LT +P++F +L  L
Sbjct: 71  IQRLPPEIANFMQLVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNL 130

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
             L ++D  L+SLP +I NL  L SL L  N L  LP  +  L+    +L+ L L NN++
Sbjct: 131 TCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLR----RLEELDLGNNEI 186

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
            +LP  I  L  L +L L  N L
Sbjct: 187 YSLPESIGALLHLKDLWLDGNQL 209


>gi|307150709|ref|YP_003886093.1| small GTP-binding protein [Cyanothece sp. PCC 7822]
 gi|306980937|gb|ADN12818.1| small GTP-binding protein [Cyanothece sp. PCC 7822]
          Length = 876

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 88/228 (38%), Positives = 116/228 (50%), Gaps = 7/228 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E  +TL L    L   P    K T LR LDL NN++T LP  I     L++L   +N LT
Sbjct: 16  EKAETLDLSFKKLETLPPEIGKLTALRYLDLRNNKLTTLPSEIGKLINLTSLNLTDNQLT 75

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  LP ++  L NL   +LS N+L   P +I  +  L  LYL +N L  +P  I  L  +
Sbjct: 76  A--LPPEIGKLSNLSRLHLSYNKLTSLPPEIGQLTILCELYLSHNHLETLPFTIENLVHI 133

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             LSL  N LT +P     L +L  L L++NQL +LP  I  L  L  L +  N+L TLP
Sbjct: 134 SRLSLSYNQLTTLPSAIKGLMRLSWLDLNNNQLTTLPPEIGQLNSLNQLDVGYNQLTTLP 193

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            EI  L      L S+ +  NKL +LP EI  L  L  L++ +N L I
Sbjct: 194 PEIGQLL----NLISIDVSYNKLTSLPPEIGQLLNLDSLTISNNQLTI 237



 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 101/292 (34%), Positives = 139/292 (47%), Gaps = 40/292 (13%)

Query: 25  KTLDFSYSSLDSETLATQIELLP--------NNDYNKKPENIDTLL------LYHNNLSF 70
           +TLD S+  L  ETL  +I  L         NN     P  I  L+      L  N L+ 
Sbjct: 19  ETLDLSFKKL--ETLPPEIGKLTALRYLDLRNNKLTTLPSEIGKLINLTSLNLTDNQLTA 76

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFPL--STLIARNNLLTAESLPKDMSNLKNL 128
            P    K +NL  L LS N++T LP  I    +     ++ N+L   E+LP  + NL ++
Sbjct: 77  LPPEIGKLSNLSRLHLSYNKLTSLPPEIGQLTILCELYLSHNHL---ETLPFTIENLVHI 133

Query: 129 KVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
              +LS NQL   P  I  +  L +L L NN L  +P EI +L  L+ L +G N LT +P
Sbjct: 134 SRLSLSYNQLTTLPSAIKGLMRLSWLDLNNNQLTTLPPEIGQLNSLNQLDVGYNQLTTLP 193

Query: 189 DTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI------ITLKC 242
              G L  L ++ +S N+L SLP  I  L  L SL + NN+L  LP EI      I+L  
Sbjct: 194 PEIGQLLNLISIDVSYNKLTSLPPEIGQLLNLDSLTISNNQLTILPPEIGYLSNLISLNL 253

Query: 243 LSEKLKSL-------------LLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
              KL SL              L +N+L+ LP EI  L  L+ L L++N L+
Sbjct: 254 SYNKLSSLPPEIGQLTKLIQLRLSHNQLQELPAEIGHLTQLTSLVLKNNQLL 305



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 86/226 (38%), Positives = 119/226 (52%), Gaps = 10/226 (4%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L HN+L   P       ++  L LS N++T LP AI     LS L   NN LT  +LP
Sbjct: 113 LYLSHNHLETLPFTIENLVHISRLSLSYNQLTTLPSAIKGLMRLSWLDLNNNQLT--TLP 170

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            ++  L +L   ++  NQL   P +I  +  L  + +  N L  +P EI +L  L  L++
Sbjct: 171 PEIGQLNSLNQLDVGYNQLTTLPPEIGQLLNLISIDVSYNKLTSLPPEIGQLLNLDSLTI 230

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N LT +P   G L  L +L LS N+L SLP  I  L  L  L L +N+L+ LP EI  
Sbjct: 231 SNNQLTILPPEIGYLSNLISLNLSYNKLSSLPPEIGQLTKLIQLRLSHNQLQELPAEIGH 290

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKC---LSELSLRDNPLVI 282
           L     +L SL+L NN+L TLP E+I L     L++L L++N L I
Sbjct: 291 LT----QLTSLVLKNNQLLTLPFELIQLVQFFKLTQLDLQENLLSI 332



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 84/213 (39%), Positives = 112/213 (52%), Gaps = 5/213 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           +I  L L +N L+  P        L  LDL+NN++T LP  I     L+ L    N LT 
Sbjct: 132 HISRLSLSYNQLTTLPSAIKGLMRLSWLDLNNNQLTTLPPEIGQLNSLNQLDVGYNQLT- 190

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LP ++  L NL   ++S N+L   P +I  +  L  L + NN L  +P EI  L  L 
Sbjct: 191 -TLPPEIGQLLNLISIDVSYNKLTSLPPEIGQLLNLDSLTISNNQLTILPPEIGYLSNLI 249

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L+L  N L+ +P   G L +L  L LS NQL+ LPA I +L  L SL+L NN+L TLP 
Sbjct: 250 SLNLSYNKLSSLPPEIGQLTKLIQLRLSHNQLQELPAEIGHLTQLTSLVLKNNQLLTLPF 309

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLK 268
           E+I L     KL  L L  N L ++P EII  K
Sbjct: 310 ELIQLVQFF-KLTQLDLQEN-LLSIPPEIIWRK 340



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 72/184 (39%), Positives = 93/184 (50%), Gaps = 14/184 (7%)

Query: 129 KVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
           +  +LS  +LE  P +I  +  L+YL L NN L  +P EI KL  L  L+L  N LT +P
Sbjct: 19  ETLDLSFKKLETLPPEIGKLTALRYLDLRNNKLTTLPSEIGKLINLTSLNLTDNQLTALP 78

Query: 189 DTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLK 248
              G L  L  L LS N+L SLP  I  L +L  L L +N L TLP  I  L  +S    
Sbjct: 79  PEIGKLSNLSRLHLSYNKLTSLPPEIGQLTILCELYLSHNHLETLPFTIENLVHISR--- 135

Query: 249 SLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEI 308
            L L  N+L TLP+ I  L  LS L L +N L        T  PP + +L S  L   ++
Sbjct: 136 -LSLSYNQLTTLPSAIKGLMRLSWLDLNNNQL--------TTLPPEIGQLNS--LNQLDV 184

Query: 309 DYSQ 312
            Y+Q
Sbjct: 185 GYNQ 188


>gi|345328894|ref|XP_001505309.2| PREDICTED: leucine-rich repeat-containing protein 1-like
           [Ornithorhynchus anatinus]
          Length = 466

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 68/182 (37%), Positives = 101/182 (55%), Gaps = 3/182 (1%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ P++ ++   L  LDL NN I HLP+ I     L  L    N L  
Sbjct: 240 NLASLELRENLLTYLPESLTQLQRLEELDLGNNEIYHLPETIGALLHLKDLWLDGNQLA- 298

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLK+L   ++S N+LE+ P +I  + +L  L +  N L  +P  I KL KL 
Sbjct: 299 -ELPQEIGNLKSLLCLDVSENKLERLPEEISGLTSLTDLVISQNLLEIIPDGIGKLKKLS 357

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N L  + +  G+   L  L+L++NQL +LP SI  LK L +L    NKL+ LP 
Sbjct: 358 ILKVDQNRLIKLTEAVGECENLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKLQHLPK 417

Query: 236 EI 237
           EI
Sbjct: 418 EI 419



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 64/178 (35%), Positives = 83/178 (46%), Gaps = 19/178 (10%)

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           + +L NL    L  N L   P  +  +  L+ L LGNN + H+P  I  L  L  L L G
Sbjct: 235 VRDLYNLASLELRENLLTYLPESLTQLQRLEELDLGNNEIYHLPETIGALLHLKDLWLDG 294

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N L ++P   G+L  L  L +S+N+LE LP  IS L  L  L++  N L  +P  I  LK
Sbjct: 295 NQLAELPQEIGNLKSLLCLDVSENKLERLPEEISGLTSLTDLVISQNLLEIIPDGIGKLK 354

Query: 242 CLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            LS                   E L  L+L  N+L TLP  I  LK LS L+   N L
Sbjct: 355 KLSILKVDQNRLIKLTEAVGECENLTELVLTENQLLTLPKSIGKLKKLSNLNADRNKL 412



 Score = 72.0 bits (175), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/139 (37%), Positives = 72/139 (51%), Gaps = 4/139 (2%)

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
           + + D+  L  L L  N L ++P  + +L +L  L LG N +  +P+T G L  L+ L L
Sbjct: 233 LGVRDLYNLASLELRENLLTYLPESLTQLQRLEELDLGNNEIYHLPETIGALLHLKDLWL 292

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
             NQL  LP  I NLK L  L +  NKL  LP EI  L  L++    L++  N L  +P 
Sbjct: 293 DGNQLAELPQEIGNLKSLLCLDVSENKLERLPEEISGLTSLTD----LVISQNLLEIIPD 348

Query: 263 EIITLKCLSELSLRDNPLV 281
            I  LK LS L +  N L+
Sbjct: 349 GIGKLKKLSILKVDQNRLI 367



 Score = 56.2 bits (134), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 45/115 (39%), Positives = 59/115 (51%), Gaps = 4/115 (3%)

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           +  L  L  L L  N LT +P++   L +LE L L +N++  LP +I  L  LK L L  
Sbjct: 235 VRDLYNLASLELRENLLTYLPESLTQLQRLEELDLGNNEIYHLPETIGALLHLKDLWLDG 294

Query: 228 NKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           N+L  LP EI  LK     L  L +  NKL  LP EI  L  L++L +  N L I
Sbjct: 295 NQLAELPQEIGNLK----SLLCLDVSENKLERLPEEISGLTSLTDLVISQNLLEI 345


>gi|440802431|gb|ELR23360.1| protein phosphatase 2C domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 895

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/226 (33%), Positives = 114/226 (50%), Gaps = 10/226 (4%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L+ N+L+  P   ++FT L++LDL  NRI   P A+ +   L+ L+   N + +    
Sbjct: 150 LYLFQNHLATIPAEIAEFTELQALDLKYNRIKEWPTALCSVTTLAELLLAGNRVRSFPPA 209

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            DM+ L  LK  +LS N L +FP  +  +P L  L L  N L  +   I  L  L  LS+
Sbjct: 210 DDMAKLAALKKLDLSQNGLREFPEALCSLPALADLALDRNYLEGLSPAIGHLSSLTRLSI 269

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             NSL  +P+   DL  L+ L ++DNQ+ SLP  +  L  L+ L +  N +  LP ++  
Sbjct: 270 KANSLKSLPEELCDLEYLQELCIADNQVTSLPEGLGKLVNLQKLDISENAITALPADVSG 329

Query: 240 LKCLSEKLKSLLLHNNKLRTLP-----TEIITLKCLSELSLRDNPL 280
           L  L +KL +     NK+  +P     TE      L+EL+L  N L
Sbjct: 330 LTAL-QKLNA---KRNKIECIPESATVTETGGFYSLTELNLAHNQL 371



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 75/228 (32%), Positives = 111/228 (48%), Gaps = 15/228 (6%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           E +  L +  N ++  P+   K  NL+ LD+S N IT LP  ++    L  L A+ N + 
Sbjct: 285 EYLQELCIADNQVTSLPEGLGKLVNLQKLDISENAITALPADVSGLTALQKLNAKRNKI- 343

Query: 115 AESLPK-----DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREIN 169
            E +P+     +     +L   NL+ NQLE +   +     L+ + L  N L  VP EI+
Sbjct: 344 -ECIPESATVTETGGFYSLTELNLAHNQLESWSSALWTSEALQVVNLTANRLPEVPAEIS 402

Query: 170 KLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
            L  L  L L  N +T + +  G L  L+ L LS N LE++PA +  L  L+ L L  N+
Sbjct: 403 YLYNLTHLHLNANRITVVANELGQLAALDTLELSFNDLEAVPADLGYLAALRVLSLGYNR 462

Query: 230 L--RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
           L    LP     L  LS  L+ L L  N L+ +P  + +L  LS+L L
Sbjct: 463 LSGEALP----DLSALS-ALEQLFLAGNPLQHVPGWVGSLPALSQLHL 505



 Score = 67.8 bits (164), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 22/171 (12%)

Query: 130 VFNLSGNQLEQF-PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
           V + S  +L+++ P++IL    LK LYL  N L  +P EI +  +L  L L  N + + P
Sbjct: 125 VLDRSKKELKEWDPVEILGKKWLKKLYLFQNHLATIPAEIAEFTELQALDLKYNRIKEWP 184

Query: 189 DTFGDLYQLEALILSDNQLESLPAS--ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE- 245
                +  L  L+L+ N++ S P +  ++ L  LK L L  N LR  P  + +L  L++ 
Sbjct: 185 TALCSVTTLAELLLAGNRVRSFPPADDMAKLAALKKLDLSQNGLREFPEALCSLPALADL 244

Query: 246 ------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
                              L  L +  N L++LP E+  L+ L EL + DN
Sbjct: 245 ALDRNYLEGLSPAIGHLSSLTRLSIKANSLKSLPEELCDLEYLQELCIADN 295



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 129/274 (47%), Gaps = 37/274 (13%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLL 113
           E +  + L  N L   P   S   NL  L L+ NRIT +   +     L TL ++ N+L 
Sbjct: 382 EALQVVNLTANRLPEVPAEISYLYNLTHLHLNANRITVVANELGQLAALDTLELSFNDL- 440

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQL--EQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
             E++P D+  L  L+V +L  N+L  E  P  +  +  L+ L+L  N L HVP  +  L
Sbjct: 441 --EAVPADLGYLAALRVLSLGYNRLSGEALP-DLSALSALEQLFLAGNPLQHVPGWVGSL 497

Query: 172 CKLHVLSL-----------GGNS---------LTDIPDTFGDLYQLEALILSDNQLESLP 211
             L  L L           G N+         L ++P+    L  L+ L +S N+L++LP
Sbjct: 498 PALSQLHLHLVRPSSLLFTGENAPGHGLYLAELEELPEELCGLPSLQYLDVSGNKLKALP 557

Query: 212 ASISNLKMLKSLLLHNNKLRT--LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           A +  L  L+ L+  +N L T  +P  +  L+    +L+ + L  N+L+T+P  +  LK 
Sbjct: 558 AKLPELSGLQRLIACHNALETEGVPDGVDDLR----ELEEIDLSYNQLKTVPESVHYLKD 613

Query: 270 LSELSLRDNPL---VIRFVSDMTYKPPSLLELAS 300
            + + L+ NPL    +R     T+ P    +++S
Sbjct: 614 RAHILLQGNPLDEETLRSYHTHTWTPSKRFKVSS 647


>gi|359726570|ref|ZP_09265266.1| hypothetical protein Lwei2_06132 [Leptospira weilii str.
           2006001855]
          Length = 540

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 82/230 (35%), Positives = 124/230 (53%), Gaps = 9/230 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLL 113
           +N+  L L  N L   P    +  NL++LDL +N++   P+ +     L  L ++ N L+
Sbjct: 63  QNLQELYLQWNQLIAIPKEIGQLQNLQTLDLRDNQLVTFPKEMVELQKLEMLDLSENRLI 122

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
               LP ++  L++L+  +L  N+L   P +I  +  L+ L+   N L  +P+EI +L  
Sbjct: 123 I---LPAEIGLLQSLQSLSLYKNKLTTLPKEIGQLQNLQELWSPGNRLTTLPKEIGQLKN 179

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N LT +P   G L  L+ L L DNQL  LP  I  L+ L++L L NN+L T 
Sbjct: 180 LQTLNLANNRLTALPKEIGQLQNLQTLDLRDNQLIILPKEIGQLQNLQTLNLVNNRLTTF 239

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
           P EI  L    + L++L L NN+L T P EI  L+ L +L L  NPL ++
Sbjct: 240 PKEIGQL----QNLQTLNLVNNRLTTFPKEIGQLQNLRDLELLINPLSLK 285



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 95/258 (36%), Positives = 129/258 (50%), Gaps = 38/258 (14%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-----------PLS 104
           +N+ TL L +N L+ FP    +  NL++L+L NNR+T  P+ I              PLS
Sbjct: 224 QNLQTLNLVNNRLTTFPKEIGQLQNLQTLNLVNNRLTTFPKEIGQLQNLRDLELLINPLS 283

Query: 105 TLIARNNL--------LTAESLPKD-------MSNLKNLKVFNLS-----GNQLEQFPIQ 144
            L  R  +        L    + KD       ++  + L+V  LS      +QL  FP +
Sbjct: 284 -LKERKRIQKLFPNSNLDLREVAKDGVYHNLNLAQEEPLQVLELSIAYKSFSQL--FPKE 340

Query: 145 ILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD 204
           IL    L+ LYL +     VP+EI +L  L  L LG N L ++P T G L  L  L L  
Sbjct: 341 ILKFRNLQSLYLYDCGFPTVPKEIGRLKNLKYLLLGLNGLHNLPSTIGQLRNLRGLNLEA 400

Query: 205 NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           N LESLP  I+ L+ L +L LH NKL+T P EI+ L     KL+ L L  N+L+ LP E+
Sbjct: 401 NLLESLPKEIARLRNLHTLRLHQNKLKTFPKEILQLG----KLQKLDLSANELKILPEEL 456

Query: 265 ITLKCLSELSLRDNPLVI 282
             L+ L EL L  N L I
Sbjct: 457 ERLQNLQELDLSHNQLTI 474



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 75/188 (39%), Positives = 98/188 (52%), Gaps = 19/188 (10%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N   ++V NLSG +L   P +I  +  L+ LYL  N L  +P+EI +L  
Sbjct: 28  TYTDLTKALQNPSKVRVLNLSGQELATLPKEIGQLQNLQELYLQWNQLIAIPKEIGQLQN 87

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L L  N L   P    +L +LE L LS+N+L  LPA I  L+ L+SL L+ NKL TL
Sbjct: 88  LQTLDLRDNQLVTFPKEMVELQKLEMLDLSENRLIILPAEIGLLQSLQSLSLYKNKLTTL 147

Query: 234 PTEIITLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELS 274
           P EI  L+ L E                    L++L L NN+L  LP EI  L+ L  L 
Sbjct: 148 PKEIGQLQNLQELWSPGNRLTTLPKEIGQLKNLQTLNLANNRLTALPKEIGQLQNLQTLD 207

Query: 275 LRDNPLVI 282
           LRDN L+I
Sbjct: 208 LRDNQLII 215



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 72/197 (36%), Positives = 97/197 (49%), Gaps = 5/197 (2%)

Query: 69  SFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNL 128
             FP    KF NL+SL L +     +P+ I     +       L    +LP  +  L+NL
Sbjct: 335 QLFPKEILKFRNLQSLYLYDCGFPTVPKEIGRL-KNLKYLLLGLNGLHNLPSTIGQLRNL 393

Query: 129 KVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
           +  NL  N LE  P +I  +  L  L L  N L   P+EI +L KL  L L  N L  +P
Sbjct: 394 RGLNLEANLLESLPKEIARLRNLHTLRLHQNKLKTFPKEILQLGKLQKLDLSANELKILP 453

Query: 189 DTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLK 248
           +    L  L+ L LS NQL  LP  I+ L+ L+ L L+ N+L TLP+EI  LK    KLK
Sbjct: 454 EELERLQNLQELDLSHNQLTILPKEIAKLQNLQELHLNGNQLTTLPSEIGFLK----KLK 509

Query: 249 SLLLHNNKLRTLPTEII 265
            L L+ N+  +   E I
Sbjct: 510 ILRLYQNEFSSEEKERI 526



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 36/112 (32%), Positives = 60/112 (53%), Gaps = 4/112 (3%)

Query: 171 LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           +C+L    +   + TD+     +  ++  L LS  +L +LP  I  L+ L+ L L  N+L
Sbjct: 16  ICELQAEEVEQGTYTDLTKALQNPSKVRVLNLSGQELATLPKEIGQLQNLQELYLQWNQL 75

Query: 231 RTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
             +P EI  L    + L++L L +N+L T P E++ L+ L  L L +N L+I
Sbjct: 76  IAIPKEIGQL----QNLQTLDLRDNQLVTFPKEMVELQKLEMLDLSENRLII 123


>gi|340712839|ref|XP_003394961.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Bombus
           terrestris]
          Length = 610

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 120/228 (52%), Gaps = 10/228 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNA-SKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           ++ T+ L  N  + +P    ++FTN+ S++L +N+I  +P  I +    L+ L  + N L
Sbjct: 361 DLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLNMKENQL 420

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA  LP D+    N+   NL  NQL + P  I  +  L+ L L NN L  +P  I  L K
Sbjct: 421 TA--LPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRK 478

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L VL L  N +  +P+  G L  L+ LIL  NQ+ SLP +I +L  L  L +  N L  L
Sbjct: 479 LRVLDLEENKIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYL 538

Query: 234 PTEIITLKCLSEKLKSLLLHNNK-LRTLPTEIITLKCLSELSLRDNPL 280
           P EI TL    E L SL +++N  L  LP E+     LS +S+ + PL
Sbjct: 539 PEEIGTL----ENLDSLYVNDNANLHNLPFELALCTNLSIMSIENCPL 582



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 82/273 (30%), Positives = 131/273 (47%), Gaps = 9/273 (3%)

Query: 9   SSSDSSDSDSFKTVSIKTLDFSYSSLDSETLAT-QIELLPNNDYNK-KPENIDTLLLYHN 66
           SS+  +  D+ KTV++K  + +     ++     Q +L  + ++ + K E ++ L L  +
Sbjct: 80  SSASIAGPDTKKTVTVKHPESNKPKPTTKKGKPIQADLDVSKEFTRCKEECLERLDLSKS 139

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNL 125
           N++  P      T+L    L  N++  LP  I     L TL    N LT  SLP  + NL
Sbjct: 140 NITHLPSTVRDLTHLVEFYLYGNKLVTLPPEIGCLGNLETLALSENSLT--SLPNTLENL 197

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           K+L+V +L  N+L + P  +  +  L  L+L  N + +V   I  L  L +LSL  N + 
Sbjct: 198 KSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIR 257

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           ++P   G L  L    +S N LE LP  I N   L +L L +N+L  +P  I  L  L+ 
Sbjct: 258 ELPAGIGKLVNLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIGRLVLLTR 317

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
               L L  N+L ++P  +   K + E S+  N
Sbjct: 318 ----LGLRYNRLTSIPKSLANCKLMDEFSVEGN 346



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 11/184 (5%)

Query: 14  SDSDSFKTVSIKTLDFSYSSLDSETLATQIEL-LPNNDYNKKP------ENIDTLLLYHN 66
           S + +   +++K    +   LD  T    +EL L  N   K P      +N++ L+L +N
Sbjct: 405 SRAKNLAKLNMKENQLTALPLDIGTWVNMVELNLGTNQLTKIPDDIQCLQNLEVLILSNN 464

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNL 125
            L   P + +    LR LDL  N+I  LP  I     L  LI ++N +T  SLP+ + +L
Sbjct: 465 LLKRIPASIANLRKLRVLDLEENKIESLPNEIGFLRDLQKLILQSNQVT--SLPRAIGHL 522

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS-LNHVPREINKLCKLHVLSLGGNSL 184
            NL   ++  N L   P +I  +  L  LY+ +N+ L+++P E+     L ++S+    L
Sbjct: 523 TNLTYLSVGENNLNYLPEEIGTLENLDSLYVNDNANLHNLPFELALCTNLSIMSIENCPL 582

Query: 185 TDIP 188
           + IP
Sbjct: 583 SQIP 586


>gi|124005852|ref|ZP_01690690.1| small GTP-binding protein domain [Microscilla marina ATCC 23134]
 gi|123988535|gb|EAY28176.1| small GTP-binding protein domain [Microscilla marina ATCC 23134]
          Length = 312

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/236 (36%), Positives = 122/236 (51%), Gaps = 14/236 (5%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
           H  L  FP+   +   + +L+LS+N+I  +P  +T    L  L   NN +T       + 
Sbjct: 8   HQGLREFPEEIRQTPRITNLNLSDNQIERIPAWVTTLKNLQVLYLNNNQITNID---KLC 64

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           +L +L+V  L+ NQ+   P  I  +  LK LY+ NN L  VP  +  L +L  L L  N 
Sbjct: 65  DLPHLEVLQLNNNQISSIPGSIRSLTNLKRLYINNNLLVEVPTALGALTQLKQLLLAKNQ 124

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           L D+PD  G L  L  L L DN+LE LP +I NL  L  L L  N L  LP    TL+CL
Sbjct: 125 LVDLPDAIGKLINLTILNLFDNRLEQLPDTIGNLTQLTYLQLGFNCLVRLPH---TLQCL 181

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELA 299
            + L  L + +N+L TLP E+  L  L +L++ DN     ++S +   P SL E++
Sbjct: 182 -QALTHLEVFSNQLHTLP-ELARLPNLQKLNVGDN-----YLSGIEQLPASLTEVS 230



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 94/186 (50%), Gaps = 15/186 (8%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPL--STLIARNNLLTA 115
           ++ L L +N +S  P +    TNL+ L ++NN +  +P A+         L+A+N L+  
Sbjct: 69  LEVLQLNNNQISSIPGSIRSLTNLKRLYINNNLLVEVPTALGALTQLKQLLLAKNQLV-- 126

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP  +  L NL + NL  N+LEQ P  I ++  L YL LG N L  +P  +  L  L 
Sbjct: 127 -DLPDAIGKLINLTILNLFDNRLEQLPDTIGNLTQLTYLQLGFNCLVRLPHTLQCLQALT 185

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQL---ESLPASISNLKMLKSLLLHNNKLRT 232
            L +  N L  +P+    L  L+ L + DN L   E LPAS++ + +      ++N L  
Sbjct: 186 HLEVFSNQLHTLPE-LARLPNLQKLNVGDNYLSGIEQLPASLTEVSI------YHNPLEA 238

Query: 233 LPTEII 238
           + +E+I
Sbjct: 239 IASELI 244



 Score = 49.3 bits (116), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 75/167 (44%), Gaps = 31/167 (18%)

Query: 151 LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL-------- 202
           +K L   +  L   P EI +  ++  L+L  N +  IP     L  L+ L L        
Sbjct: 1   MKLLSYRHQGLREFPEEIRQTPRITNLNLSDNQIERIPAWVTTLKNLQVLYLNNNQITNI 60

Query: 203 --------------SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLK 248
                         ++NQ+ S+P SI +L  LK L ++NN L  +PT +  L     +LK
Sbjct: 61  DKLCDLPHLEVLQLNNNQISSIPGSIRSLTNLKRLYINNNLLVEVPTALGALT----QLK 116

Query: 249 SLLLHNNKLRTLPTEIITLKCLSELSLRDN-----PLVIRFVSDMTY 290
            LLL  N+L  LP  I  L  L+ L+L DN     P  I  ++ +TY
Sbjct: 117 QLLLAKNQLVDLPDAIGKLINLTILNLFDNRLEQLPDTIGNLTQLTY 163


>gi|296475861|tpg|DAA17976.1| TPA: erbb2 interacting protein isoform 2 [Bos taurus]
          Length = 1302

 Score =  102 bits (255), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETIGSLKNVTTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N+LE+LP+SI  L  +++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 133/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLD---------SETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    + GN LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNVT----TLKIDENQLMYLPDSIGGLVSIEEL 304


>gi|149019125|gb|EDL77766.1| similar to RIKEN cDNA A430093J20 gene, isoform CRA_c [Rattus
           norvegicus]
          Length = 443

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 94/257 (36%), Positives = 138/257 (53%), Gaps = 27/257 (10%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I  LP++I     L  L    N L+ 
Sbjct: 71  NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQLS- 129

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NL+NL   ++S N+LE+ P +I  + +L  L +  N L  VP  I KL KL 
Sbjct: 130 -ELPQEIGNLRNLLCLDVSENRLERLPEEISGLISLTDLVVSQNLLETVPDGIGKLKKLS 188

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L L  N LT +P+  GD   L  L+L++N+L +LP SI  LK L +L    NKL +LP 
Sbjct: 189 ILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPTSIGKLKKLNNLNADRNKLVSLPK 248

Query: 236 EI-----ITLKCL---------SEKLKSLLLH-----NNKLRTLPTEIITLKCLSELSLR 276
           EI     +T+ C+         SE  +++ LH      N+L  LP  + TLK L  L L 
Sbjct: 249 EIGGCCSLTVFCIRDNRLTRIPSEVSQAMELHVLDVAGNRLHHLPLSLTTLK-LKALWLS 307

Query: 277 DN---PLVIRFVSDMTY 290
           DN   PL+  F +D+ +
Sbjct: 308 DNQSQPLLT-FQTDVDH 323



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 97/291 (33%), Positives = 141/291 (48%), Gaps = 28/291 (9%)

Query: 40  ATQIELLPNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITH 93
           A Q+     N   + PE      N+  L +   +L   P+N     NL SL+L  N +T+
Sbjct: 25  ALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNLASLELRENLLTY 84

Query: 94  LPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
           LP ++T    L  L   NN +   SLP+ +  L +LK   L GNQL + P +I ++  L 
Sbjct: 85  LPDSLTQLRRLEELDLGNNEIY--SLPESIGALLHLKDLWLDGNQLSELPQEIGNLRNLL 142

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            L +  N L  +P EI+ L  L  L +  N L  +PD  G L +L  L L  N+L  LP 
Sbjct: 143 CLDVSENRLERLPEEISGLISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPE 202

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSE 272
           +I + + L  L+L  N+L TLPT I  LK    KL +L    NKL +LP EI     L+ 
Sbjct: 203 AIGDCENLTELVLTENRLLTLPTSIGKLK----KLNNLNADRNKLVSLPKEIGGCCSLTV 258

Query: 273 LSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQ---EHLPQNLV 320
             +RDN L  R  S++           S+ +++H +D +     HLP +L 
Sbjct: 259 FCIRDNRLT-RIPSEV-----------SQAMELHVLDVAGNRLHHLPLSLT 297



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 77/236 (32%), Positives = 115/236 (48%), Gaps = 20/236 (8%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSN 124
            N++   P++ S    L+  D S N +T LP++       T ++ N++ + +SLP+++ N
Sbjct: 10  RNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDI-SLQSLPENIGN 68

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L NL    L  N L   P  +  +  L+ L LGNN +  +P  I  L  L  L L GN L
Sbjct: 69  LYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALLHLKDLWLDGNQL 128

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP---------- 234
           +++P   G+L  L  L +S+N+LE LP  IS L  L  L++  N L T+P          
Sbjct: 129 SELPQEIGNLRNLLCLDVSENRLERLPEEISGLISLTDLVVSQNLLETVPDGIGKLKKLS 188

Query: 235 ---------TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                    T++       E L  L+L  N+L TLPT I  LK L+ L+   N LV
Sbjct: 189 ILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPTSIGKLKKLNNLNADRNKLV 244



 Score = 76.6 bits (187), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/218 (31%), Positives = 96/218 (44%), Gaps = 29/218 (13%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L NN+    PE+I  LL      L  N LS  P       NL  LD+S NR+  LP+ I+
Sbjct: 100 LGNNEIYSLPESIGALLHLKDLWLDGNQLSELPQEIGNLRNLLCLDVSENRLERLPEEIS 159

Query: 100 NF-PLSTLIARNNLLTA---------------------ESLPKDMSNLKNLKVFNLSGNQ 137
               L+ L+   NLL                         LP+ + + +NL    L+ N+
Sbjct: 160 GLISLTDLVVSQNLLETVPDGIGKLKKLSILKLDQNRLTQLPEAIGDCENLTELVLTENR 219

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           L   P  I  +  L  L    N L  +P+EI   C L V  +  N LT IP       +L
Sbjct: 220 LLTLPTSIGKLKKLNNLNADRNKLVSLPKEIGGCCSLTVFCIRDNRLTRIPSEVSQAMEL 279

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
             L ++ N+L  LP S++ LK LK+L L +N+ + L T
Sbjct: 280 HVLDVAGNRLHHLPLSLTTLK-LKALWLSDNQSQPLLT 316



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/150 (34%), Positives = 75/150 (50%), Gaps = 4/150 (2%)

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            ++S N + + P  I     L+      N L  +P    +L  L  LS+   SL  +P+ 
Sbjct: 6   LDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPEN 65

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
            G+LY L +L L +N L  LP S++ L+ L+ L L NN++ +LP  I  L      LK L
Sbjct: 66  IGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYSLPESIGALL----HLKDL 121

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            L  N+L  LP EI  L+ L  L + +N L
Sbjct: 122 WLDGNQLSELPQEIGNLRNLLCLDVSENRL 151



 Score = 59.7 bits (143), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 47/130 (36%), Positives = 67/130 (51%), Gaps = 4/130 (3%)

Query: 151 LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           L  L +  N +  +P  I+    L V    GN LT +P++F +L  L  L ++D  L+SL
Sbjct: 3   LVELDVSRNDIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSL 62

Query: 211 PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
           P +I NL  L SL L  N L  LP  +  L+    +L+ L L NN++ +LP  I  L  L
Sbjct: 63  PENIGNLYNLASLELRENLLTYLPDSLTQLR----RLEELDLGNNEIYSLPESIGALLHL 118

Query: 271 SELSLRDNPL 280
            +L L  N L
Sbjct: 119 KDLWLDGNQL 128


>gi|421129192|ref|ZP_15589395.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
 gi|410359582|gb|EKP06674.1| leucine rich repeat protein [Leptospira kirschneri str. 2008720114]
          Length = 332

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 84/211 (39%), Positives = 116/211 (54%), Gaps = 6/211 (2%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           P ++  L L    L+  P    +  NL +L+L NN+ T LP  I     L  L    NLL
Sbjct: 45  PLDVRVLNLSKQKLTILPKEIGQLKNLLTLNLWNNQFTTLPNEIGQLQSLQELYLGKNLL 104

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  ++PK++  LKNL++ NL  NQL   P +I  +  L+ LYL  N L  +P+EI +L  
Sbjct: 105 T--TVPKEIGQLKNLQMLNLEANQLTTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQN 162

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L+ L+L  N LT +P+  G L  L  L L+ NQ   LP  I  LK L+ L LH+N+   L
Sbjct: 163 LYELNLYENKLTTLPNEIGQLKNLRVLELTHNQFTILPEEIGKLKNLQELHLHDNQFTIL 222

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           P EI  LK L  K+ SL  + N+L+T+P EI
Sbjct: 223 PKEIGKLKNL--KMLSLGYY-NQLKTIPVEI 250



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 75/165 (45%), Positives = 94/165 (56%), Gaps = 4/165 (2%)

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LPK++  LKNL   NL  NQ    P +I  + +L+ LYLG N L  VP+EI +L  L +L
Sbjct: 61  LPKEIGQLKNLLTLNLWNNQFTTLPNEIGQLQSLQELYLGKNLLTTVPKEIGQLKNLQML 120

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
           +L  N LT +P   G L  L+ L LS NQL++LP  I  L+ L  L L+ NKL TLP EI
Sbjct: 121 NLEANQLTTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLYELNLYENKLTTLPNEI 180

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
             LK     L+ L L +N+   LP EI  LK L EL L DN   I
Sbjct: 181 GQLK----NLRVLELTHNQFTILPEEIGKLKNLQELHLHDNQFTI 221



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 75/192 (39%), Positives = 102/192 (53%), Gaps = 4/192 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L  N L+  P    +  NL+ L LS N++  LP+ I     L  L    N LT
Sbjct: 115 KNLQMLNLEANQLTTLPKEIGRLQNLQELYLSYNQLKTLPKEIGQLQNLYELNLYENKLT 174

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  LKNL+V  L+ NQ    P +I  +  L+ L+L +N    +P+EI KL  L
Sbjct: 175 --TLPNEIGQLKNLRVLELTHNQFTILPEEIGKLKNLQELHLHDNQFTILPKEIGKLKNL 232

Query: 175 HVLSLGG-NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
            +LSLG  N L  IP   G L  L+ L L  NQL +LP  I  L+ L+ L L  N+L TL
Sbjct: 233 KMLSLGYYNQLKTIPVEIGQLQNLQQLNLDANQLTTLPKEIGQLQNLQQLNLDANQLTTL 292

Query: 234 PTEIITLKCLSE 245
           P EI  L+ L E
Sbjct: 293 PNEIGQLQNLQE 304



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/169 (41%), Positives = 88/169 (52%), Gaps = 4/169 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T   L K + N  +++V NLS  +L   P +I  +  L  L L NN    +P EI +L  
Sbjct: 34  TYMDLTKAIQNPLDVRVLNLSKQKLTILPKEIGQLKNLLTLNLWNNQFTTLPNEIGQLQS 93

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L LG N LT +P   G L  L+ L L  NQL +LP  I  L+ L+ L L  N+L+TL
Sbjct: 94  LQELYLGKNLLTTVPKEIGQLKNLQMLNLEANQLTTLPKEIGRLQNLQELYLSYNQLKTL 153

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           P EI  L+ L E    L L+ NKL TLP EI  LK L  L L  N   I
Sbjct: 154 PKEIGQLQNLYE----LNLYENKLTTLPNEIGQLKNLRVLELTHNQFTI 198



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 61/156 (39%), Positives = 88/156 (56%), Gaps = 4/156 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L LY N L+  P+   +  NLR L+L++N+ T LP+ I     L  L   +N  T
Sbjct: 161 QNLYELNLYENKLTTLPNEIGQLKNLRVLELTHNQFTILPEEIGKLKNLQELHLHDNQFT 220

Query: 115 AESLPKDMSNLKNLKVFNLSG-NQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
              LPK++  LKNLK+ +L   NQL+  P++I  +  L+ L L  N L  +P+EI +L  
Sbjct: 221 I--LPKEIGKLKNLKMLSLGYYNQLKTIPVEIGQLQNLQQLNLDANQLTTLPKEIGQLQN 278

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
           L  L+L  N LT +P+  G L  L+ L L DNQL S
Sbjct: 279 LQQLNLDANQLTTLPNEIGQLQNLQELYLIDNQLSS 314


>gi|291234605|ref|XP_002737242.1| PREDICTED: leucine rich repeat containing 7-like [Saccoglossus
           kowalevskii]
          Length = 679

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 90/270 (33%), Positives = 138/270 (51%), Gaps = 21/270 (7%)

Query: 48  NNDYNKKPE-------NIDTLLLYHNNLSFFP-DNASKFTNLRSLDLSNNRITHLPQAIT 99
           NN+ +  PE       N+ +L L  NN + +P    ++F  + S+++ +N IT +P  I 
Sbjct: 276 NNNISSLPEGLLSSLVNLTSLCLSRNNFNSYPIGGPTQFATVYSINMEHNHITKIPFGIF 335

Query: 100 NFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
                L+ L  + N LTA  LP D+ +  ++   NL  NQL + P  I  + +L+ L L 
Sbjct: 336 TRAKYLTKLNMKENQLTA--LPLDVGSWMSMVELNLGTNQLSKLPEDIQALTSLEVLILS 393

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           NN L  +PR I  L K+ VL L  N L  +P     L  L+ L+L  NQL +LP +I +L
Sbjct: 394 NNLLKKLPRGIGNLQKMRVLDLEENKLESLPSEIAYLCSLQRLVLQSNQLSTLPRNIGHL 453

Query: 218 KMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNN-KLRTLPTEIITLKCLSELSLR 276
             L+ L +  N L +LP EI TL    E L+ L L++N  L  LP E+     L  +S+ 
Sbjct: 454 GTLQYLSVGENNLTSLPEEIGTL----ENLEQLYLNDNPNLHNLPFELALCSSLQIMSIE 509

Query: 277 DNPLVIRFVSDMTYKPPSLLELASRTLKVH 306
           + PL  +   ++    PSL+    + LK+H
Sbjct: 510 NCPLS-QLPQEVVAGGPSLV---IQYLKMH 535



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 78/248 (31%), Positives = 120/248 (48%), Gaps = 37/248 (14%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI-------ARNN-- 111
           L L +N L   P +     ++   ++ NN I+ LP+ +    LS+L+       +RNN  
Sbjct: 249 LGLRYNRLQAIPKSLCNCLDMEEFNVENNNISSLPEGL----LSSLVNLTSLCLSRNNFN 304

Query: 112 ---------LLTAESLPKDMSNL-----------KNLKVFNLSGNQLEQFPIQILDIPTL 151
                      T  S+  + +++           K L   N+  NQL   P+ +    ++
Sbjct: 305 SYPIGGPTQFATVYSINMEHNHITKIPFGIFTRAKYLTKLNMKENQLTALPLDVGSWMSM 364

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
             L LG N L+ +P +I  L  L VL L  N L  +P   G+L ++  L L +N+LESLP
Sbjct: 365 VELNLGTNQLSKLPEDIQALTSLEVLILSNNLLKKLPRGIGNLQKMRVLDLEENKLESLP 424

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
           + I+ L  L+ L+L +N+L TLP  I  L      L+ L +  N L +LP EI TL+ L 
Sbjct: 425 SEIAYLCSLQRLVLQSNQLSTLPRNIGHLGT----LQYLSVGENNLTSLPEEIGTLENLE 480

Query: 272 ELSLRDNP 279
           +L L DNP
Sbjct: 481 QLYLNDNP 488



 Score = 85.1 bits (209), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 69/212 (32%), Positives = 106/212 (50%), Gaps = 7/212 (3%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           +S  P +    T L  L L  NR+ +LP  I     L  L    N LT  SLP  +  LK
Sbjct: 72  ISVLPSSIKDLTQLVELYLYGNRLQYLPNEIGYLSNLQKLALSENSLT--SLPVSLERLK 129

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
            +KV +L  N+L++ P  +  + +L  L+L  N ++ V  E++ L  L +LSL  N +  
Sbjct: 130 VIKVLDLRHNKLKEIPEVVYRLTSLTTLFLRFNRISDVDEELSNLTNLTMLSLRENKIRK 189

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P   G+L  L    +S N LE LP+ I N + L SL L +N+L  LP  +  L+ LS  
Sbjct: 190 LPQGIGNLTHLITFDVSHNHLEHLPSEIGNCEQLSSLDLQHNELLDLPDSLGNLRQLSR- 248

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
              L L  N+L+ +P  +     + E ++ +N
Sbjct: 249 ---LGLRYNRLQAIPKSLCNCLDMEEFNVENN 277



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 69/247 (27%), Positives = 127/247 (51%), Gaps = 25/247 (10%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+  L L  N+L+  P +  +   ++ LDL +N++  +P+ +     L+TL  R N ++ 
Sbjct: 107 NLQKLALSENSLTSLPVSLERLKVIKVLDLRHNKLKEIPEVVYRLTSLTTLFLRFNRIS- 165

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             + +++SNL NL + +L  N++ + P  I ++  L    + +N L H+P EI    +L 
Sbjct: 166 -DVDEELSNLTNLTMLSLRENKIRKLPQGIGNLTHLITFDVSHNHLEHLPSEIGNCEQLS 224

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L D+PD+ G+L QL  L L  N+L+++P S+ N   ++   + NN + +LP 
Sbjct: 225 SLDLQHNELLDLPDSLGNLRQLSRLGLRYNRLQAIPKSLCNCLDMEEFNVENNNISSLPE 284

Query: 236 EI------ITLKCLSE---------------KLKSLLLHNNKLRTLPTEIIT-LKCLSEL 273
            +      +T  CLS                 + S+ + +N +  +P  I T  K L++L
Sbjct: 285 GLLSSLVNLTSLCLSRNNFNSYPIGGPTQFATVYSINMEHNHITKIPFGIFTRAKYLTKL 344

Query: 274 SLRDNPL 280
           ++++N L
Sbjct: 345 NMKENQL 351


>gi|302129649|ref|NP_001180472.1| protein LAP2 [Danio rerio]
          Length = 1330

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/221 (34%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L  N L   P +  K T L  LDL +N  T +P+ +     +  L    N LT   +P
Sbjct: 166 LELRENQLKMLPKSMHKLTQLERLDLGSNEFTEVPEVLEQLTGIRELWMDGNKLTF--VP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             +  LK L   ++S N +E    QI     L+ L L NN+L  +P  I  L KL  L +
Sbjct: 224 GMIGALKQLSYLDVSKNNVEMVEEQISGCENLQDLLLSNNALTQLPGSIGSLKKLSTLKV 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PDT G L  L+ L  S N++E+LP+SI     L++    +N L  +P E+ +
Sbjct: 284 DDNQLMYLPDTIGGLSHLDELDCSFNEIEALPSSIGQCVNLRTFAADHNLLAQMPPEMGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           LK ++     L LH+NKL  LP E+  ++ L  ++L DN L
Sbjct: 344 LKNVT----VLFLHSNKLENLPEEMGDMQKLKVINLSDNKL 380



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 130/293 (44%), Gaps = 53/293 (18%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYH-- 65
           ++ TLD+S+ SL+          +TL      A QIE LP   +N +       LLY   
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFSFEKTLEELYLDANQIEELPKQLFNCQ-------LLYRLS 75

Query: 66  ---NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-----------PLSTL----- 106
              N+L+  P   +   NLR LD+S N I   P+ I N            P+S L     
Sbjct: 76  LPDNDLTVLPPGIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPEGFT 135

Query: 107 ------IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
                     N    E LP     L  L++  L  NQL+  P  +  +  L+ L LG+N 
Sbjct: 136 QLLSLSQLYLNDAFLEFLPASFGRLTKLQILELRENQLKMLPKSMHKLTQLERLDLGSNE 195

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
              VP  + +L  +  L + GN LT +P   G L QL  L +S N +E +   IS  + L
Sbjct: 196 FTEVPEVLEQLTGIRELWMDGNKLTFVPGMIGALKQLSYLDVSKNNVEMVEEQISGCENL 255

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           + LLL NN L  LP  I +LK    KL +L + +N+L  LP  I  L  L EL
Sbjct: 256 QDLLLSNNALTQLPGSIGSLK----KLSTLKVDDNQLMYLPDTIGGLSHLDEL 304



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 56/169 (33%), Positives = 88/169 (52%), Gaps = 3/169 (1%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           NN+    +  S   NL+ L LSNN +T LP +I +   LSTL   +N L    LP  +  
Sbjct: 240 NNVEMVEEQISGCENLQDLLLSNNALTQLPGSIGSLKKLSTLKVDDNQLMY--LPDTIGG 297

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L +L   + S N++E  P  I     L+     +N L  +P E+  L  + VL L  N L
Sbjct: 298 LSHLDELDCSFNEIEALPSSIGQCVNLRTFAADHNLLAQMPPEMGSLKNVTVLFLHSNKL 357

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
            ++P+  GD+ +L+ + LSDN+L +LP S + L  + ++ L  N+ + L
Sbjct: 358 ENLPEEMGDMQKLKVINLSDNKLRNLPYSFTKLNQMTAMWLSENQSKPL 406



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 103/229 (44%), Gaps = 15/229 (6%)

Query: 41  TQIELL--PNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRIT 92
           TQ+E L   +N++ + PE       I  L +  N L+F P        L  LD+S N + 
Sbjct: 184 TQLERLDLGSNEFTEVPEVLEQLTGIRELWMDGNKLTFVPGMIGALKQLSYLDVSKNNVE 243

Query: 93  HLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
            + + I+    L  L+  NN LT   LP  + +LK L    +  NQL   P  I  +  L
Sbjct: 244 MVEEQISGCENLQDLLLSNNALT--QLPGSIGSLKKLSTLKVDDNQLMYLPDTIGGLSHL 301

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
             L    N +  +P  I +   L   +   N L  +P   G L  +  L L  N+LE+LP
Sbjct: 302 DELDCSFNEIEALPSSIGQCVNLRTFAADHNLLAQMPPEMGSLKNVTVLFLHSNKLENLP 361

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
             + +++ LK + L +NKLR LP     L     ++ ++ L  N+ + L
Sbjct: 362 EEMGDMQKLKVINLSDNKLRNLPYSFTKLN----QMTAMWLSENQSKPL 406


>gi|329663814|ref|NP_001193082.1| protein LAP2 [Bos taurus]
 gi|296475860|tpg|DAA17975.1| TPA: erbb2 interacting protein isoform 1 [Bos taurus]
          Length = 1372

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETIGSLKNVTTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N+LE+LP+SI  L  +++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 135/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI-ARNNLLTA----------- 115
           L+  P + +   NLR LD+S N I   P+ I N  + T++ A  N ++            
Sbjct: 81  LTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNL 140

Query: 116 ----------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                     E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    + GN LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNVT----TLKIDENQLMYLPDSIGGLVSIEEL 304


>gi|124010202|ref|ZP_01694858.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
 gi|123983746|gb|EAY24173.1| cytoplasmic membrane protein [Microscilla marina ATCC 23134]
          Length = 521

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 85/250 (34%), Positives = 129/250 (51%), Gaps = 16/250 (6%)

Query: 31  YSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNR 90
           +SS++ + LATQ          K    I+T++LY +N+       S+  +LR L +    
Sbjct: 40  FSSVE-DALATQA---------KSSRPIETMVLYGDNVINLSPRISELKDLRGLIIKCKN 89

Query: 91  ITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPT 150
           +  LP+      L +L  +++ L A  LPK +S LKNL    L+ N L + P  I  +  
Sbjct: 90  LKTLPKNFGELNLYSLRIKSDSLIA--LPKSISKLKNLYRLELNANSLTRLPKGIGKLQK 147

Query: 151 LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           L+ L +G+NSL  +P+ I KL  L  L L  ++L  +P + G L  L+ LIL  + L+ L
Sbjct: 148 LQRLKIGSNSLRALPKSIGKLQNLKKLILRVDALKKLPKSIGKLQNLKKLILRADALKKL 207

Query: 211 PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
           P SI  L+ LK L+L  + L+ LP  I  L    + LK L+L  + L+ LP  I  L  L
Sbjct: 208 PKSIGKLQNLKKLILRADALKKLPKSIGKL----QNLKKLILRADALKKLPKSIGRLPNL 263

Query: 271 SELSLRDNPL 280
            +L L+ N L
Sbjct: 264 EQLVLQVNRL 273



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/233 (36%), Positives = 117/233 (50%), Gaps = 12/233 (5%)

Query: 55  PENIDTLLLYH-----NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIA 108
           P+N   L LY      ++L   P + SK  NL  L+L+ N +T LP+ I     L  L  
Sbjct: 94  PKNFGELNLYSLRIKSDSLIALPKSISKLKNLYRLELNANSLTRLPKGIGKLQKLQRLKI 153

Query: 109 RNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREI 168
            +N L A  LPK +  L+NLK   L  + L++ P  I  +  LK L L  ++L  +P+ I
Sbjct: 154 GSNSLRA--LPKSIGKLQNLKKLILRVDALKKLPKSIGKLQNLKKLILRADALKKLPKSI 211

Query: 169 NKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN 228
            KL  L  L L  ++L  +P + G L  L+ LIL  + L+ LP SI  L  L+ L+L  N
Sbjct: 212 GKLQNLKKLILRADALKKLPKSIGKLQNLKKLILRADALKKLPKSIGRLPNLEQLVLQVN 271

Query: 229 KLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +L TLP  +  L     KLK + L  + LRTLP  I     L  L L  N LV
Sbjct: 272 RLTTLPKSLSQL----PKLKKMTLIAHHLRTLPKSIGNFPELEMLELEVNNLV 320



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/223 (33%), Positives = 112/223 (50%), Gaps = 7/223 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L+L  + L   P +  K  NL+ L L  + +  LP++I     L  LI R + 
Sbjct: 167 KLQNLKKLILRVDALKKLPKSIGKLQNLKKLILRADALKKLPKSIGKLQNLKKLILRADA 226

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L  + LPK +  L+NLK   L  + L++ P  I  +P L+ L L  N L  +P+ +++L 
Sbjct: 227 L--KKLPKSIGKLQNLKKLILRADALKKLPKSIGRLPNLEQLVLQVNRLTTLPKSLSQLP 284

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           KL  ++L  + L  +P + G+  +LE L L  N L +L   I   K LK L + N +  T
Sbjct: 285 KLKKMTLIAHHLRTLPKSIGNFPELEMLELEVNNLVALTPGIGQFKQLKYLKIVNGQFAT 344

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
           LP  I  L    + L+ L L N  L TLP  I  LK L  L +
Sbjct: 345 LPQSIGDL----QNLEMLFLLNVPLTTLPKGIGNLKKLRRLQI 383



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 63/185 (34%), Positives = 92/185 (49%), Gaps = 3/185 (1%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L+L  + L   P +  K  NL+ L L  + +  LP++I   P L  L+ + N 
Sbjct: 213 KLQNLKKLILRADALKKLPKSIGKLQNLKKLILRADALKKLPKSIGRLPNLEQLVLQVNR 272

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LPK +S L  LK   L  + L   P  I + P L+ L L  N+L  +   I +  
Sbjct: 273 LT--TLPKSLSQLPKLKKMTLIAHHLRTLPKSIGNFPELEMLELEVNNLVALTPGIGQFK 330

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           +L  L +       +P + GDL  LE L L +  L +LP  I NLK L+ L +  +KL T
Sbjct: 331 QLKYLKIVNGQFATLPQSIGDLQNLEMLFLLNVPLTTLPKGIGNLKKLRRLQILKSKLTT 390

Query: 233 LPTEI 237
           LP  I
Sbjct: 391 LPEAI 395



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 90/187 (48%), Gaps = 4/187 (2%)

Query: 55  PENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLL 113
           PE ++ L L  NNL        +F  L+ L + N +   LPQ+I +   L  L   N  L
Sbjct: 307 PE-LEMLELEVNNLVALTPGIGQFKQLKYLKIVNGQFATLPQSIGDLQNLEMLFLLNVPL 365

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  +LPK + NLK L+   +  ++L   P  I ++  L  L L  N L  +P  I  L  
Sbjct: 366 T--TLPKGIGNLKKLRRLQILKSKLTTLPEAIDNLQNLVLLNLSYNQLTRLPESIGNLQN 423

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L+L  N LT  P++   L  L  L  + NQL SLP SI  LK L  L L  N+L+TL
Sbjct: 424 LGNLNLSHNQLTQFPESLSKLSGLGTLNANHNQLTSLPKSIGALKGLVYLQLRYNQLKTL 483

Query: 234 PTEIITL 240
           P     L
Sbjct: 484 PKSFYKL 490


>gi|395860102|ref|XP_003802354.1| PREDICTED: protein scribble homolog isoform 3 [Otolemur garnettii]
          Length = 1669

 Score =  102 bits (254), Expect = 3e-19,   Method: Composition-based stats.
 Identities = 87/274 (31%), Positives = 125/274 (45%), Gaps = 42/274 (15%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N LS  PD  ++  +L  L L++  +  LP  + N   L TL  R NLL  +SLP  +S 
Sbjct: 115 NPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLL--KSLPASLSF 172

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L  L+  +L GN LE  P  +  +P L+ L+L  N L+ +P E+  L +L  L +  N L
Sbjct: 173 LVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 185 TDIP-----------------------DTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
            ++P                       D  G L QL  L +  N+L  +P +I + + L 
Sbjct: 233 EELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVPEAIGDCENLS 292

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L+L  N L  LP  +  L     KL +L +  N L  LP EI     LS LSLRDN L 
Sbjct: 293 ELILTENLLTALPHSLGKLT----KLTNLNVDRNHLEVLPPEIGGCVALSVLSLRDNRLA 348

Query: 282 IRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHL 315
           +         PP L    + T ++H +D +   L
Sbjct: 349 VL--------PPEL----AHTAELHVLDVAGNRL 370



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 77/225 (34%), Positives = 112/225 (49%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ TL L  N L   P + S    L  LDL  N +  LP  +   P L  L    N L+A
Sbjct: 152 NLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSA 211

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP ++ NL+ L   ++S N+LE+ P ++  +  L  L L  N L  +P  I +L +L 
Sbjct: 212 --LPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N L ++P+  GD   L  LIL++N L +LP S+  L  L +L +  N L  LP 
Sbjct: 270 ILKVDQNRLCEVPEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI    C++  L  L L +N+L  LP E+     L  L +  N L
Sbjct: 330 EI--GGCVA--LSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRL 370



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 70/219 (31%), Positives = 101/219 (46%), Gaps = 10/219 (4%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLP-QAITNF 101
           +E+LP  D      N+  L L  N LS  P        L  LD+S NR+  LP +     
Sbjct: 186 LEVLP--DTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLV 243

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L+ L+   NLL  + LP  +  LK L +  +  N+L + P  I D   L  L L  N L
Sbjct: 244 LLTDLLLSQNLL--QRLPDGIGQLKQLSILKVDQNRLCEVPEAIGDCENLSELILTENLL 301

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +P  + KL KL  L++  N L  +P   G    L  L L DN+L  LP  +++   L 
Sbjct: 302 TALPHSLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELH 361

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L +  N+LR+LP  +  L      LK+L L  N+ + +
Sbjct: 362 VLDVAGNRLRSLPFALTHL-----NLKALWLAENQAQPM 395


>gi|332210029|ref|XP_003254112.1| PREDICTED: leucine-rich repeat-containing protein 1 [Nomascus
           leucogenys]
          Length = 504

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 101/327 (30%), Positives = 150/327 (45%), Gaps = 51/327 (15%)

Query: 46  LPNN-DYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLS 104
           LP N   N+ P N+D  ++      F P++     +L+ L L  N+++ LPQ I      
Sbjct: 143 LPENIGKNEIPPNLDVTMVILAKCDFLPESIGALLHLKDLWLDGNQLSELPQEI------ 196

Query: 105 TLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHV 164
                              NLKNL   ++S N+LE+ P +I  + +L  L +  N L  +
Sbjct: 197 ------------------GNLKNLLCLDVSENRLERLPEEISGLTSLTDLVISQNLLETI 238

Query: 165 PREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLL 224
           P  I KL KL +L +  N LT +P+  GD   L  L+L++NQL +LP SI  LK L +L 
Sbjct: 239 PDGIGKLKKLSILKVDQNRLTQLPEAVGDCESLTELVLTENQLLTLPKSIGKLKKLSNLN 298

Query: 225 LHNNKLRTLPTEI-----ITLKCL---------SEKLKSLLLH-----NNKLRTLPTEII 265
              NKL +LP EI     +T+ C+         SE  ++  LH      N+L  LP  + 
Sbjct: 299 ADRNKLVSLPKEIGGCCSLTVFCVRDNRLTRIPSEVSQATELHVLDVAGNRLLHLPLSLT 358

Query: 266 TLKCLSELSLRDN---PLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQY 322
            LK L  L L DN   PL + F +D  Y     +       ++      QE+LP+     
Sbjct: 359 ALK-LKALWLSDNQSQPL-LTFQTDTDYTTGEKILTCVLLPQLPSEPTCQENLPR--CGA 414

Query: 323 LESAHHCVNPKCKGVFFDNRIEHIKFV 349
           LES  + V+ +       NR+  I+FV
Sbjct: 415 LESLVNDVSDEAWNECAVNRVSAIRFV 441



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/253 (32%), Positives = 119/253 (47%), Gaps = 35/253 (13%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN +  
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNEI-- 94

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK---- 170
              +P+ +S  K L+V + SGN L + P    ++  L  L + + SL  +P  I K    
Sbjct: 95  -PEIPESISFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGKNEIP 153

Query: 171 ----------------------LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLE 208
                                 L  L  L L GN L+++P   G+L  L  L +S+N+LE
Sbjct: 154 PNLDVTMVILAKCDFLPESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLE 213

Query: 209 SLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLK 268
            LP  IS L  L  L++  N L T+P  I  LK    KL  L +  N+L  LP  +   +
Sbjct: 214 RLPEEISGLTSLTDLVISQNLLETIPDGIGKLK----KLSILKVDQNRLTQLPEAVGDCE 269

Query: 269 CLSELSLRDNPLV 281
            L+EL L +N L+
Sbjct: 270 SLTELVLTENQLL 282



 Score = 67.4 bits (163), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 100/227 (44%), Gaps = 34/227 (14%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ S+D  +  + ++P+ I  +   L  L+   N L    LP+    L  L+   LS N+
Sbjct: 13  HVESIDKRHCSLVYVPEEIYRYARSLEELLLDANQL--RELPEQFFQLVKLRKLGLSDNE 70

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           +++ P +I +   L  L +  N +  +P  I+    L V    GN LT +P++F +L  L
Sbjct: 71  IQRLPPEIANFMQLVELDVSRNEIPEIPESISFCKALQVADFSGNPLTRLPESFPELQNL 130

Query: 198 EALILSDNQLES--------------------------LPASISNLKMLKSLLLHNNKLR 231
             L ++D  L+S                          LP SI  L  LK L L  N+L 
Sbjct: 131 TCLSVNDISLQSLPENIGKNEIPPNLDVTMVILAKCDFLPESIGALLHLKDLWLDGNQLS 190

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            LP EI  LK     L  L +  N+L  LP EI  L  L++L +  N
Sbjct: 191 ELPQEIGNLK----NLLCLDVSENRLERLPEEISGLTSLTDLVISQN 233


>gi|440908498|gb|ELR58508.1| Protein LAP2 [Bos grunniens mutus]
          Length = 1412

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETIGSLKNVTTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N+LE+LP+SI  L  +++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLVSIEELDCSFNELEALPSSIGQLTNIRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 135/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI-ARNNLLTA----------- 115
           L+  P + +   NLR LD+S N I   P+ I N  + T++ A  N ++            
Sbjct: 81  LTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNL 140

Query: 116 ----------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                     E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    + GN LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNVT----TLKIDENQLMYLPDSIGGLVSIEEL 304


>gi|156550592|ref|XP_001603998.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Nasonia
           vitripennis]
          Length = 582

 Score =  102 bits (254), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 87/244 (35%), Positives = 125/244 (51%), Gaps = 11/244 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNA-SKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           N+ T+ L  N  + +P    S+FTN+ S++L +N+I  +P  I +    L+ L  + N L
Sbjct: 333 NLKTITLSRNAFTAYPSGGPSQFTNVYSINLEHNKIDKIPYGIFSRAKNLTKLNMKENQL 392

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA  LP D     N+   NL  NQL + P  I  +  L+ L L NN L  +P  I  L K
Sbjct: 393 TA--LPLDTGTWINMVELNLGTNQLVKIPDDIQYLQNLEILILSNNLLKRIPASIASLSK 450

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L VL L  N +  +P+  G L  L+ LIL  NQ+ SLP +I +L  L  L +  N L  L
Sbjct: 451 LRVLDLEENKIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTHLSVGENNLNYL 510

Query: 234 PTEIITLKCLSEKLKSLLLHNNK-LRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKP 292
           P EI TL    E L  L +++N  L  LP E+     LS +S+ + PL  +   ++    
Sbjct: 511 PEEIGTL----ENLDCLYINDNANLHNLPFELALCTNLSIMSIENCPLS-QIPPEIVAGG 565

Query: 293 PSLL 296
           PSL+
Sbjct: 566 PSLV 569



 Score = 88.6 bits (218), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 106/207 (51%), Gaps = 6/207 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ TL L  N+L+  PD       L+ LDL +N++  +P  +     L+TL  R N +  
Sbjct: 148 NLKTLALSENSLTSLPDTLENLKQLKVLDLRHNKLNEIPDVVYKLTSLTTLFLRFNRVRY 207

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            S   ++ NL NL + +L  N++++ P  I  +  L    + +N L H+P EI    +L 
Sbjct: 208 VS--DNIRNLTNLTMLSLRENKIKELPAGIGKLTNLVTFDVSHNHLEHLPAEIGNCDQLS 265

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N L DIP+T G+L  +  L L  N+L S+P S++N K++    +  N++  LP 
Sbjct: 266 TLDLQHNELLDIPETIGNLVSVTRLGLRYNRLSSIPKSLANCKLMDEFSVEGNQVSQLPD 325

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPT 262
            +  L  LS  LK++ L  N     P+
Sbjct: 326 GL--LSSLS-NLKTITLSRNAFTAYPS 349



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 109/226 (48%), Gaps = 7/226 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           + E    L L  ++++  P++    T+L    L  N++  LP  I     L TL    N 
Sbjct: 99  RDEGFKRLDLSKSSITNLPNSVRDLTHLVEFYLYGNKLVTLPPEIGCLANLKTLALSENS 158

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  SLP  + NLK LKV +L  N+L + P  +  + +L  L+L  N + +V   I  L 
Sbjct: 159 LT--SLPDTLENLKQLKVLDLRHNKLNEIPDVVYKLTSLTTLFLRFNRVRYVSDNIRNLT 216

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L +LSL  N + ++P   G L  L    +S N LE LPA I N   L +L L +N+L  
Sbjct: 217 NLTMLSLRENKIKELPAGIGKLTNLVTFDVSHNHLEHLPAEIGNCDQLSTLDLQHNELLD 276

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           +P  I  L  ++     L L  N+L ++P  +   K + E S+  N
Sbjct: 277 IPETIGNLVSVTR----LGLRYNRLSSIPKSLANCKLMDEFSVEGN 318



 Score = 56.6 bits (135), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 92/184 (50%), Gaps = 11/184 (5%)

Query: 14  SDSDSFKTVSIKTLDFSYSSLDSETLATQIEL-LPNNDYNKKP------ENIDTLLLYHN 66
           S + +   +++K    +   LD+ T    +EL L  N   K P      +N++ L+L +N
Sbjct: 377 SRAKNLTKLNMKENQLTALPLDTGTWINMVELNLGTNQLVKIPDDIQYLQNLEILILSNN 436

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNL 125
            L   P + +  + LR LDL  N+I  LP  I     L  LI ++N +T  SLP+ + +L
Sbjct: 437 LLKRIPASIASLSKLRVLDLEENKIESLPNEIGFLRDLQKLILQSNQVT--SLPRAIGHL 494

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS-LNHVPREINKLCKLHVLSLGGNSL 184
            NL   ++  N L   P +I  +  L  LY+ +N+ L+++P E+     L ++S+    L
Sbjct: 495 TNLTHLSVGENNLNYLPEEIGTLENLDCLYINDNANLHNLPFELALCTNLSIMSIENCPL 554

Query: 185 TDIP 188
           + IP
Sbjct: 555 SQIP 558


>gi|417761874|ref|ZP_12409875.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|417776983|ref|ZP_12424812.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|418673271|ref|ZP_13234593.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
 gi|409942285|gb|EKN87901.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000624]
 gi|410573272|gb|EKQ36325.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000621]
 gi|410579764|gb|EKQ47603.1| leucine rich repeat protein [Leptospira interrogans str.
           2002000623]
          Length = 287

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/195 (39%), Positives = 105/195 (53%), Gaps = 9/195 (4%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI--TNFPLSTLIARNNLLTAESLPKDM 122
           +N L   P    +  NL+ L L +N++T L + I          ++ N L   ++LPK++
Sbjct: 80  YNQLKTLPKEIEQLKNLQRLYLMDNQLTILSKEIGQLQNLQLLNLSYNQL---KTLPKEI 136

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             LKNL+  +L  NQL   P +I  +  L  LYLG+N L  +P+EI +L  LH L L  N
Sbjct: 137 EQLKNLQTLDLGSNQLTVLPQEIGQLENLHELYLGSNQLIVLPQEIGQLENLHELDLSSN 196

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            L  +P     L  L+ L L  NQL +LP  I  LK LK L L++N+L TLP EI  LK 
Sbjct: 197 RLKILPKEIKQLKNLQKLYLDYNQLTTLPQEIGQLKNLKWLYLYSNQLATLPKEIEQLK- 255

Query: 243 LSEKLKSLLLHNNKL 257
               LKSL L NN+L
Sbjct: 256 ---NLKSLNLKNNQL 267



 Score = 98.6 bits (244), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 85/198 (42%), Positives = 113/198 (57%), Gaps = 7/198 (3%)

Query: 87  SNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI 145
           S N++  LP+ I     L  L   +N LT   L K++  L+NL++ NLS NQL+  P +I
Sbjct: 79  SYNQLKTLPKEIEQLKNLQRLYLMDNQLTI--LSKEIGQLQNLQLLNLSYNQLKTLPKEI 136

Query: 146 LDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDN 205
             +  L+ L LG+N L  +P+EI +L  LH L LG N L  +P   G L  L  L LS N
Sbjct: 137 EQLKNLQTLDLGSNQLTVLPQEIGQLENLHELYLGSNQLIVLPQEIGQLENLHELDLSSN 196

Query: 206 QLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
           +L+ LP  I  LK L+ L L  N+L TLP EI  LK     LK L L++N+L TLP EI 
Sbjct: 197 RLKILPKEIKQLKNLQKLYLDYNQLTTLPQEIGQLK----NLKWLYLYSNQLATLPKEIE 252

Query: 266 TLKCLSELSLRDNPLVIR 283
            LK L  L+L++N L I 
Sbjct: 253 QLKNLKSLNLKNNQLSIE 270



 Score = 69.7 bits (169), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 92/167 (55%), Gaps = 4/167 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           + L K + N  ++ V NLS  +L+  PI+I  +  L+ L L  N L  +P+EI +L  L 
Sbjct: 38  QDLTKALQNPLDVLVLNLSRQELKTLPIEIGQLKNLQLLNLSYNQLKTLPKEIEQLKNLQ 97

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +    G L  L+ L LS NQL++LP  I  LK L++L L +N+L  LP 
Sbjct: 98  RLYLMDNQLTILSKEIGQLQNLQLLNLSYNQLKTLPKEIEQLKNLQTLDLGSNQLTVLPQ 157

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           EI  L+ L E    L L +N+L  LP EI  L+ L EL L  N L I
Sbjct: 158 EIGQLENLHE----LYLGSNQLIVLPQEIGQLENLHELDLSSNRLKI 200



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 64/125 (51%), Gaps = 7/125 (5%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           EN+  L L  N L   P    +  NL  LDLS+NR+  LP+ I     L  L    N LT
Sbjct: 163 ENLHELYLGSNQLIVLPQEIGQLENLHELDLSSNRLKILPKEIKQLKNLQKLYLDYNQLT 222

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INKL-- 171
             +LP+++  LKNLK   L  NQL   P +I  +  LK L L NN L+   +E I KL  
Sbjct: 223 --TLPQEIGQLKNLKWLYLYSNQLATLPKEIEQLKNLKSLNLKNNQLSIEEKERIRKLLP 280

Query: 172 -CKLH 175
            C+++
Sbjct: 281 KCQIY 285


>gi|291228434|ref|XP_002734187.1| PREDICTED: leucine-rich and death domain containing-like
           [Saccoglossus kowalevskii]
          Length = 470

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 94/344 (27%), Positives = 156/344 (45%), Gaps = 50/344 (14%)

Query: 38  TLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKF-TNLRSLDLSNNRITHLPQ 96
           T  T  + +       KP  +D   L + NL   PD      + L SL+LSNNR+     
Sbjct: 148 TGGTAAQGIVEGACQDKPTELD---LSYLNLKRCPDRIGYIGSQLVSLNLSNNRLA---- 200

Query: 97  AITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL 156
                               SLP ++  L+ L+ F L  N L + P  I ++  L  L  
Sbjct: 201 --------------------SLPDEIGFLRGLEEFFLQYNCLTELPNSIGNLQKLVELDC 240

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI-------LSDNQLES 209
            NN +  +P  +  +  L +L++  N L   P + G L++LE L        +S  +L  
Sbjct: 241 KNNRIRRLPNTLGNMTCLSILNVTNNGLQSFPSSIGKLHELEELCAXXSELDISSCELVY 300

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           LP S+S    L  + L NNKL+ +P ++  L     +LK L + NN++R  P  +  L+ 
Sbjct: 301 LPDSLSRCTSLVKIWLSNNKLKAIPDQMGRL----NQLKELHVRNNQIRYFPASLSYLQ- 355

Query: 270 LSELSLRDNPLV----IRFVSDMTYKP----PSLLELASRTLKVHEIDYSQEHLPQNLVQ 321
           L   S   NPL+    I  + +++ +P    P L EL++R +  +++ +S+  +P  L  
Sbjct: 356 LYTFSANHNPLIEEWNIESILNLSVQPSQVIPPLSELSARCIVKNDVYWSKGDVPTALED 415

Query: 322 YLESAHHCVNPKCKGVFFDNRIEHIKFVDFCGKYRIPLLQYLCS 365
            L +   C +  C+G FF +    + F +    +R+PL Q +CS
Sbjct: 416 MLLNVRQCSS--CEGPFFKHYKSQVVFSNVGVFHRVPLYQQICS 457


>gi|348529816|ref|XP_003452408.1| PREDICTED: leucine-rich repeat-containing protein 7 [Oreochromis
           niloticus]
          Length = 1645

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 82/235 (34%), Positives = 119/235 (50%), Gaps = 13/235 (5%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           +P+ND +  P  I +L+      +  N +  FPDN      L  ++ S N IT LP   T
Sbjct: 89  MPDNDLSNLPTTIASLVNLKELDISKNGIQEFPDNIKCCKGLSVVEASVNPITKLPDGFT 148

Query: 100 NF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L+ L   +  L  E LP +   L  L++  L  N L+  P  I  +  L+ L LG+
Sbjct: 149 QLLNLTQLFLNDAFL--EYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGS 206

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N  + VP  + ++  L  L L  NSL  IP + G L QL  L L+ N++E+L A IS  +
Sbjct: 207 NEFSEVPEVLEQIHNLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIETLDADISGCE 266

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            L+ LLL +N L+ LP  I  LK    KL +L + +N+L +LP  I +L  L EL
Sbjct: 267 ALEDLLLSSNMLQHLPDSIGMLK----KLTTLKVDDNQLTSLPNTIGSLSLLEEL 317



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 76/219 (34%), Positives = 110/219 (50%), Gaps = 7/219 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N+L   P +  + T L  LDL +N  + +P+ +     L  L   NN L  +++P
Sbjct: 179 LELRENHLKTMPKSIHRLTQLERLDLGSNEFSEVPEVLEQIHNLKELWLDNNSL--QTIP 236

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             +  L+ L+  +L+ N++E     I     L+ L L +N L H+P  I  L KL  L +
Sbjct: 237 GSIGKLRQLRYLDLAKNRIETLDADISGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKV 296

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N LT +P+T G L  LE L  S N+LESLP +I  L  L++     N L  LP EI  
Sbjct: 297 DDNQLTSLPNTIGSLSLLEELDCSCNELESLPPTIGYLHSLRTFAADENFLSELPREIGN 356

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            K ++     + L +NKL  LP EI  +  L  L+L DN
Sbjct: 357 CKNVT----VMSLRSNKLEFLPDEIGQMTKLRVLNLSDN 391



 Score = 84.7 bits (208), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 74/225 (32%), Positives = 112/225 (49%), Gaps = 34/225 (15%)

Query: 41  TQIELL--PNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRI- 91
           TQ+E L   +N++++ PE      N+  L L +N+L   P +  K   LR LDL+ NRI 
Sbjct: 197 TQLERLDLGSNEFSEVPEVLEQIHNLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKNRIE 256

Query: 92  ----------------------THLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNL 128
                                  HLP +I     L+TL   +N LT  SLP  + +L  L
Sbjct: 257 TLDADISGCEALEDLLLSSNMLQHLPDSIGMLKKLTTLKVDDNQLT--SLPNTIGSLSLL 314

Query: 129 KVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
           +  + S N+LE  P  I  + +L+      N L+ +PREI     + V+SL  N L  +P
Sbjct: 315 EELDCSCNELESLPPTIGYLHSLRTFAADENFLSELPREIGNCKNVTVMSLRSNKLEFLP 374

Query: 189 DTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           D  G + +L  L LSDN+L++LP + + LK L +L L +N+ + L
Sbjct: 375 DEIGQMTKLRVLNLSDNRLKNLPFTFTKLKDLAALWLSDNQSKAL 419



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/217 (33%), Positives = 96/217 (44%), Gaps = 25/217 (11%)

Query: 84  LDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           LD S+  +  +P+ I +F   L  L    N +  E LPK + N + LK  ++  N L   
Sbjct: 40  LDYSHCSLQQVPKEIFSFERTLEELYLDANQI--EELPKQLFNCQALKKLSMPDNDLSNL 97

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCK-LHVLSLGGNSLTDIPDTFGDLYQLEAL 200
           P  I  +  LK L +  N +   P  I K CK L V+    N +T +PD F  L  L  L
Sbjct: 98  PTTIASLVNLKELDISKNGIQEFPDNI-KCCKGLSVVEASVNPITKLPDGFTQLLNLTQL 156

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE--------------- 245
            L+D  LE LPA+   L  L+ L L  N L+T+P  I  L  L                 
Sbjct: 157 FLNDAFLEYLPANFGRLSKLRILELRENHLKTMPKSIHRLTQLERLDLGSNEFSEVPEVL 216

Query: 246 ----KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
                LK L L NN L+T+P  I  L+ L  L L  N
Sbjct: 217 EQIHNLKELWLDNNSLQTIPGSIGKLRQLRYLDLAKN 253


>gi|363737250|ref|XP_422802.3| PREDICTED: leucine-rich repeat and IQ domain-containing protein
           4-like [Gallus gallus]
          Length = 579

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 85/263 (32%), Positives = 122/263 (46%), Gaps = 31/263 (11%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP 102
           ++ LP    N K   +  + L +N    FP   SK  +L  +DL  N I+H+P+ I +  
Sbjct: 176 LQCLPKEIVNLK--KLKEIYLRNNRFENFPIELSKIVSLEIIDLEQNLISHIPEEIGSLT 233

Query: 103 -LSTLIARNNLLTA---------------------ESLPKDMSNLKNLKVFNLSGNQLEQ 140
            L  L   +N L++                       LP  + NL   +   LSGN LE+
Sbjct: 234 NLVKLFLASNKLSSIPPTLRHCQKLAVLDLSHNPLHKLPPVLKNLTGKRELGLSGNSLEE 293

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P Q     +L ++YL N  L+ V R   +L  + VL L  N   +IP     +  LE L
Sbjct: 294 PPAQTGSWASLTHVYLRNTGLHKVHRSFTRLTSIRVLDLSENCFDEIPKGICSMKNLEIL 353

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNN---KL 257
            L DNQ++ +PA I  L  LK L L  N+  + P EI+    L E L+ L L  N   KL
Sbjct: 354 NLDDNQIQEIPAEIQELTNLKCLSLSQNQFNSFPMEIL----LVESLEKLYLGQNKGIKL 409

Query: 258 RTLPTEIITLKCLSELSLRDNPL 280
            +LP +II L+ L EL + +N L
Sbjct: 410 TSLPEDIIKLQNLKELHIENNGL 432



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 64/193 (33%), Positives = 103/193 (53%), Gaps = 10/193 (5%)

Query: 76  SKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLS 134
           ++ T++R LDLS N    +P+ I +   L  L   +N    + +P ++  L NLK  +LS
Sbjct: 322 TRLTSIRVLDLSENCFDEIPKGICSMKNLEILNLDDN--QIQEIPAEIQELTNLKCLSLS 379

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNS---LNHVPREINKLCKLHVLSLGGNSLTDIPDTF 191
            NQ   FP++IL + +L+ LYLG N    L  +P +I KL  L  L +  N L  +P   
Sbjct: 380 QNQFNSFPMEILLVESLEKLYLGQNKGIKLTSLPEDIIKLQNLKELHIENNGLERLPPAV 439

Query: 192 GDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLL 251
           G L  L+ L   +N L+ LP S+  ++ L+ LL+ NN+L  L   + +LK    +L+ +L
Sbjct: 440 GSLTHLKVLDCHNNLLKKLPESLGQIQGLQKLLVQNNQLSRLSERLGSLK----QLQVVL 495

Query: 252 LHNNKLRTLPTEI 264
           +  N +   P E+
Sbjct: 496 VDGNPMTDPPIEV 508



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/250 (30%), Positives = 116/250 (46%), Gaps = 29/250 (11%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           + +  L L HN L   P      T  R L LS N +   P    ++  L+ +  RN  L 
Sbjct: 256 QKLAVLDLSHNPLHKLPPVLKNLTGKRELGLSGNSLEEPPAQTGSWASLTHVYLRNTGLH 315

Query: 115 A---------------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKY 153
                                 + +PK + ++KNL++ NL  NQ+++ P +I ++  LK 
Sbjct: 316 KVHRSFTRLTSIRVLDLSENCFDEIPKGICSMKNLEILNLDDNQIQEIPAEIQELTNLKC 375

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNS---LTDIPDTFGDLYQLEALILSDNQLESL 210
           L L  N  N  P EI  +  L  L LG N    LT +P+    L  L+ L + +N LE L
Sbjct: 376 LSLSQNQFNSFPMEILLVESLEKLYLGQNKGIKLTSLPEDIIKLQNLKELHIENNGLERL 435

Query: 211 PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
           P ++ +L  LK L  HNN L+ LP  +  +    + L+ LL+ NN+L  L   + +LK L
Sbjct: 436 PPAVGSLTHLKVLDCHNNLLKKLPESLGQI----QGLQKLLVQNNQLSRLSERLGSLKQL 491

Query: 271 SELSLRDNPL 280
             + +  NP+
Sbjct: 492 QVVLVDGNPM 501



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 66/226 (29%), Positives = 113/226 (50%), Gaps = 5/226 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           +N+  L L HN++    +      N+ SLDLSNN +++    + +   S    R   +  
Sbjct: 93  KNMKVLYLDHNHIRDVCEELGMLKNILSLDLSNNPLSYSSLLVISSLQSLHQLRLYQINL 152

Query: 116 ESLPKDMSN-LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +P  +   L  +++  LS N L+  P +I+++  LK +YL NN   + P E++K+  L
Sbjct: 153 YEIPVQICKYLHLIELLGLSDNNLQCLPKEIVNLKKLKEIYLRNNRFENFPIELSKIVSL 212

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            ++ L  N ++ IP+  G L  L  L L+ N+L S+P ++ + + L  L L +N L  LP
Sbjct: 213 EIIDLEQNLISHIPEEIGSLTNLVKLFLASNKLSSIPPTLRHCQKLAVLDLSHNPLHKLP 272

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
                LK L+ K + L L  N L   P +  +   L+ + LR+  L
Sbjct: 273 P---VLKNLTGK-RELGLSGNSLEEPPAQTGSWASLTHVYLRNTGL 314



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/149 (32%), Positives = 78/149 (52%), Gaps = 4/149 (2%)

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            +L+   L+    ++  +  L+ L++  N + ++P+EI  L  + VL L  N + D+ + 
Sbjct: 52  IDLANKHLKTISAEVFRLEDLEELHVEKNLIVNIPKEIKLLKNMKVLYLDHNHIRDVCEE 111

Query: 191 FGDLYQLEALILSDNQLE-SLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
            G L  + +L LS+N L  S    IS+L+ L  L L+   L  +P +I     L E L  
Sbjct: 112 LGMLKNILSLDLSNNPLSYSSLLVISSLQSLHQLRLYQINLYEIPVQICKYLHLIELLG- 170

Query: 250 LLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             L +N L+ LP EI+ LK L E+ LR+N
Sbjct: 171 --LSDNNLQCLPKEIVNLKKLKEIYLRNN 197



 Score = 45.8 bits (107), Expect = 0.041,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 66/152 (43%), Gaps = 33/152 (21%)

Query: 46  LPNNDYNKKP------ENIDTLLLYHNN---LSFFPDNASKFTNLRSLDLSNNRITHLPQ 96
           L  N +N  P      E+++ L L  N    L+  P++  K  NL+ L + NN +  LP 
Sbjct: 378 LSQNQFNSFPMEILLVESLEKLYLGQNKGIKLTSLPEDIIKLQNLKELHIENNGLERLPP 437

Query: 97  AITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYL 156
           A+                         +L +LKV +   N L++ P  +  I  L+ L +
Sbjct: 438 AV------------------------GSLTHLKVLDCHNNLLKKLPESLGQIQGLQKLLV 473

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
            NN L+ +   +  L +L V+ + GN +TD P
Sbjct: 474 QNNQLSRLSERLGSLKQLQVVLVDGNPMTDPP 505



 Score = 41.2 bits (95), Expect = 0.78,   Method: Compositional matrix adjust.
 Identities = 28/93 (30%), Positives = 49/93 (52%), Gaps = 3/93 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L + +N L   P      T+L+ LD  NN +  LP+++     L  L+ +NN 
Sbjct: 418 KLQNLKELHIENNGLERLPPAVGSLTHLKVLDCHNNLLKKLPESLGQIQGLQKLLVQNNQ 477

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI 145
           L+   L + + +LK L+V  + GN +   PI++
Sbjct: 478 LS--RLSERLGSLKQLQVVLVDGNPMTDPPIEV 508


>gi|260788668|ref|XP_002589371.1| hypothetical protein BRAFLDRAFT_218147 [Branchiostoma floridae]
 gi|229274548|gb|EEN45382.1| hypothetical protein BRAFLDRAFT_218147 [Branchiostoma floridae]
          Length = 310

 Score =  102 bits (254), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/246 (29%), Positives = 120/246 (48%), Gaps = 26/246 (10%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           +++++ + HN L+  P+   +   L  LD   N++T LPQAI   P L+ L   +N LT 
Sbjct: 36  DLESINVSHNKLTSIPEAIGRLQKLSRLDAGGNKLTSLPQAIGTLPKLTHLYVYDNKLTK 95

Query: 116 ---------------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYL 154
                                 + P  +  L+ L+   +  NQL + P  +  +P L+ L
Sbjct: 96  LPTGVCLLLNLEVLSAFNNNLSTFPPGVEKLQKLRELYVYDNQLTEVPPGVCSLPNLEVL 155

Query: 155 YLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASI 214
            +G N +  +P ++ +L +L  L++  N LT IP+  G L +L  L    N L SLP  I
Sbjct: 156 SVGRNPIRRLPDDVTRLTRLKDLNVSDNKLTSIPEAIGRLQKLYRLDAHGNMLTSLPQEI 215

Query: 215 SNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
            +L+ L  L +H+NKL  LP  I  L    +KL+ L +  N+L  +P+ + +L  L  L 
Sbjct: 216 GSLQKLTHLYVHSNKLANLPPGIEKL----QKLRQLYICGNQLTEVPSGVCSLPNLEVLH 271

Query: 275 LRDNPL 280
           + +N L
Sbjct: 272 VGNNKL 277



 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 84/248 (33%), Positives = 125/248 (50%), Gaps = 29/248 (11%)

Query: 58  IDTLL---LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLL 113
           +D LL   L +  L+  P+     T+L S+++S+N++T +P+AI     LS L A  N L
Sbjct: 11  VDGLLYLNLSNQGLTSIPEEVFDITDLESINVSHNKLTSIPEAIGRLQKLSRLDAGGNKL 70

Query: 114 TA---------------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
           T+                       LP  +  L NL+V +   N L  FP  +  +  L+
Sbjct: 71  TSLPQAIGTLPKLTHLYVYDNKLTKLPTGVCLLLNLEVLSAFNNNLSTFPPGVEKLQKLR 130

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            LY+ +N L  VP  +  L  L VLS+G N +  +PD    L +L+ L +SDN+L S+P 
Sbjct: 131 ELYVYDNQLTEVPPGVCSLPNLEVLSVGRNPIRRLPDDVTRLTRLKDLNVSDNKLTSIPE 190

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSE 272
           +I  L+ L  L  H N L +LP EI +L    +KL  L +H+NKL  LP  I  L+ L +
Sbjct: 191 AIGRLQKLYRLDAHGNMLTSLPQEIGSL----QKLTHLYVHSNKLANLPPGIEKLQKLRQ 246

Query: 273 LSLRDNPL 280
           L +  N L
Sbjct: 247 LYICGNQL 254



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 70/213 (32%), Positives = 111/213 (52%), Gaps = 9/213 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLT 114
           N++ L  ++NNLS FP    K   LR L + +N++T +P  + + P L  L + RN +  
Sbjct: 105 NLEVLSAFNNNLSTFPPGVEKLQKLRELYVYDNQLTEVPPGVCSLPNLEVLSVGRNPI-- 162

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP D++ L  LK  N+S N+L   P  I  +  L  L    N L  +P+EI  L KL
Sbjct: 163 -RRLPDDVTRLTRLKDLNVSDNKLTSIPEAIGRLQKLYRLDAHGNMLTSLPQEIGSLQKL 221

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L +  N L ++P     L +L  L +  NQL  +P+ + +L  L+ L + NNKL T P
Sbjct: 222 THLYVHSNKLANLPPGIEKLQKLRQLYICGNQLTEVPSGVCSLPNLEVLHVGNNKLSTFP 281

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITL 267
             +  L    +KL+ L ++ N+L  +P+ + +L
Sbjct: 282 PGVEKL----QKLRELYIYGNQLTEVPSGVCSL 310



 Score = 87.8 bits (216), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 59/189 (31%), Positives = 96/189 (50%), Gaps = 3/189 (1%)

Query: 53  KKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNN 111
           +K + +  L +Y N L+  P       NL  L +  N I  LP  +T    L  L   +N
Sbjct: 124 EKLQKLRELYVYDNQLTEVPPGVCSLPNLEVLSVGRNPIRRLPDDVTRLTRLKDLNVSDN 183

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  S+P+ +  L+ L   +  GN L   P +I  +  L +LY+ +N L ++P  I KL
Sbjct: 184 KLT--SIPEAIGRLQKLYRLDAHGNMLTSLPQEIGSLQKLTHLYVHSNKLANLPPGIEKL 241

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
            KL  L + GN LT++P     L  LE L + +N+L + P  +  L+ L+ L ++ N+L 
Sbjct: 242 QKLRQLYICGNQLTEVPSGVCSLPNLEVLHVGNNKLSTFPPGVEKLQKLRELYIYGNQLT 301

Query: 232 TLPTEIITL 240
            +P+ + +L
Sbjct: 302 EVPSGVCSL 310



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/159 (34%), Positives = 82/159 (51%), Gaps = 5/159 (3%)

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NLS   L   P ++ DI  L+ + + +N L  +P  I +L KL  L  GGN LT +P  
Sbjct: 17  LNLSNQGLTSIPEEVFDITDLESINVSHNKLTSIPEAIGRLQKLSRLDAGGNKLTSLPQA 76

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
            G L +L  L + DN+L  LP  +  L  L+ L   NN L T P  +  L    +KL+ L
Sbjct: 77  IGTLPKLTHLYVYDNKLTKLPTGVCLLLNLEVLSAFNNNLSTFPPGVEKL----QKLREL 132

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMT 289
            +++N+L  +P  + +L  L  LS+  NP + R   D+T
Sbjct: 133 YVYDNQLTEVPPGVCSLPNLEVLSVGRNP-IRRLPDDVT 170


>gi|260788630|ref|XP_002589352.1| hypothetical protein BRAFLDRAFT_218112 [Branchiostoma floridae]
 gi|229274529|gb|EEN45363.1| hypothetical protein BRAFLDRAFT_218112 [Branchiostoma floridae]
          Length = 340

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 71/216 (32%), Positives = 111/216 (51%), Gaps = 10/216 (4%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L +Y+N L   P      +NL+ LD +NN+ +  P  +     L+ L   +N LT   +P
Sbjct: 18  LYIYNNQLKEVPPGVCMLSNLQVLDANNNKFSTFPPGVEKLQKLTKLYIYDNQLT--EVP 75

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
              S L+ L+   ++GNQL + P  +  +P L+   +GNN L+  P  + KL KL  L +
Sbjct: 76  ---SGLQKLRELGINGNQLTEIPSGLCSLPNLEKFSVGNNKLSTFPPGVEKLQKLRELYI 132

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
            GN LT++P     L  LE L +S N+L + P  +  L+ LK L + +NKL  LP  +  
Sbjct: 133 YGNQLTEVPSGVCSLPNLEVLDVSSNKLSAFPPGVEKLQKLKELGIADNKLTKLPPGV-- 190

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
             CL   L+ L+ + N +  LP ++  LK L  L +
Sbjct: 191 --CLLSNLERLIANRNPIAYLPDDVTRLKRLKLLDV 224



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/258 (27%), Positives = 118/258 (45%), Gaps = 32/258 (12%)

Query: 48  NNDYNKKPENIDTL------LLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           NN ++  P  ++ L       +Y N L+  P    K   LR L ++ N++T +P  + + 
Sbjct: 45  NNKFSTFPPGVEKLQKLTKLYIYDNQLTEVPSGLQK---LRELGINGNQLTEIPSGLCSL 101

Query: 102 P-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
           P L      NN L+  + P  +  L+ L+   + GNQL + P  +  +P L+ L + +N 
Sbjct: 102 PNLEKFSVGNNKLS--TFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLDVSSNK 159

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L+  P  + KL KL  L +  N LT +P     L  LE LI + N +  LP  ++ LK L
Sbjct: 160 LSAFPPGVEKLQKLKELGIADNKLTKLPPGVCLLSNLERLIANRNPIAYLPDDVTRLKRL 219

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSE--------------------KLKSLLLHNNKLRTL 260
           K L + + +    P +++ LK L E                     L+ + L NNK  T 
Sbjct: 220 KLLDVASCQFDEFPRQVLRLKTLEELYAGQPEGRKTLPSTLSHLHNLREVYLSNNKFDTF 279

Query: 261 PTEIITLKCLSELSLRDN 278
           P  +  L  + +L +R+N
Sbjct: 280 PEALCELPAMEKLYIRNN 297



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 61/192 (31%), Positives = 99/192 (51%), Gaps = 10/192 (5%)

Query: 91  ITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIP 149
           +T LPQAI +   ++ L   NN L  + +P  +  L NL+V + + N+   FP  +  + 
Sbjct: 2   LTSLPQAIGSLQKMTHLYIYNNQL--KEVPPGVCMLSNLQVLDANNNKFSTFPPGVEKLQ 59

Query: 150 TLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            L  LY+ +N L  VP   + L KL  L + GN LT+IP     L  LE   + +N+L +
Sbjct: 60  KLTKLYIYDNQLTEVP---SGLQKLRELGINGNQLTEIPSGLCSLPNLEKFSVGNNKLST 116

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
            P  +  L+ L+ L ++ N+L  +P+ + +L      L+ L + +NKL   P  +  L+ 
Sbjct: 117 FPPGVEKLQKLRELYIYGNQLTEVPSGVCSLP----NLEVLDVSSNKLSAFPPGVEKLQK 172

Query: 270 LSELSLRDNPLV 281
           L EL + DN L 
Sbjct: 173 LKELGIADNKLT 184



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 109/227 (48%), Gaps = 8/227 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++   + +N LS FP    K   LR L +  N++T +P  + + P L  L   +N L+A
Sbjct: 103 NLEKFSVGNNKLSTFPPGVEKLQKLRELYIYGNQLTEVPSGVCSLPNLEVLDVSSNKLSA 162

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
              P  +  L+ LK   ++ N+L + P  +  +  L+ L    N + ++P ++ +L +L 
Sbjct: 163 --FPPGVEKLQKLKELGIADNKLTKLPPGVCLLSNLERLIANRNPIAYLPDDVTRLKRLK 220

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQ-LESLPASISNLKMLKSLLLHNNKLRTLP 234
           +L +      + P     L  LE L     +  ++LP+++S+L  L+ + L NNK  T P
Sbjct: 221 LLDVASCQFDEFPRQVLRLKTLEELYAGQPEGRKTLPSTLSHLHNLREVYLSNNKFDTFP 280

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             +    C    ++ L + NN +  +PT +     L +L +  NPL 
Sbjct: 281 EAL----CELPAMEKLYIRNNNITRIPTALHRADKLKDLCVSGNPLT 323



 Score = 65.1 bits (157), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 71/133 (53%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           N++ L+   N +++ PD+ ++   L+ LD+++ +    P+ +        +        +
Sbjct: 195 NLERLIANRNPIAYLPDDVTRLKRLKLLDVASCQFDEFPRQVLRLKTLEELYAGQPEGRK 254

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +LP  +S+L NL+   LS N+ + FP  + ++P ++ LY+ NN++  +P  +++  KL  
Sbjct: 255 TLPSTLSHLHNLREVYLSNNKFDTFPEALCELPAMEKLYIRNNNITRIPTALHRADKLKD 314

Query: 177 LSLGGNSLTDIPD 189
           L + GN LT  P 
Sbjct: 315 LCVSGNPLTYPPQ 327


>gi|221379722|ref|NP_732231.2| Sur-8, isoform A [Drosophila melanogaster]
 gi|221379725|ref|NP_650620.3| Sur-8, isoform B [Drosophila melanogaster]
 gi|442619579|ref|NP_001262664.1| Sur-8, isoform F [Drosophila melanogaster]
 gi|261277919|sp|Q9VEK6.3|SUR8_DROME RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|21711803|gb|AAM75092.1| RH55123p [Drosophila melanogaster]
 gi|220903112|gb|AAF55415.3| Sur-8, isoform A [Drosophila melanogaster]
 gi|220903113|gb|AAN13743.2| Sur-8, isoform B [Drosophila melanogaster]
 gi|440217531|gb|AGB96044.1| Sur-8, isoform F [Drosophila melanogaster]
          Length = 641

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/228 (34%), Positives = 123/228 (53%), Gaps = 10/228 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNA-SKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
            + T+ L  N  + +P    ++FTN+ S++L +NRI  +P  I +    L+ L  + N+L
Sbjct: 392 GLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENML 451

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA  LP D+    N+   NL+ N L++ P  I+++  L+ L L NN L  +P  I  L K
Sbjct: 452 TA--LPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRK 509

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N +  +P   G L++L+ LIL  NQ+  LP SI +L  L  L +  N L+ L
Sbjct: 510 LRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFL 569

Query: 234 PTEIITLKCLSEKLKSLLLHNN-KLRTLPTEIITLKCLSELSLRDNPL 280
           P EI +L    E L++L ++ N  L  LP E+   + L  L++   PL
Sbjct: 570 PEEIGSL----ESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCPL 613



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 127/268 (47%), Gaps = 24/268 (8%)

Query: 14  SDSDSFKTV------SIKTLDFSYSSLD--SETLATQIEL----LPNNDYNKKPENIDTL 61
           +D D  K +       IK LD S SS+     T+   + L    L +N   + P  I  L
Sbjct: 146 ADQDVIKALQRCRDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCL 205

Query: 62  L------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +      L  N+L+  P++    + L+ LDL +N++  +P  I     L+TL  R N +T
Sbjct: 206 VSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRIT 265

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  +  D+  L NL + +L  N++ +    I  +  L  L + +N L H+P +I     L
Sbjct: 266 A--VADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNL 323

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L DIPD+ G+L  L  L +  N+L S+PA++ N K +    +  N +  LP
Sbjct: 324 SALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLP 383

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPT 262
             +  L  LS  L ++ L  N+  + PT
Sbjct: 384 DGM--LASLS-GLTTITLSRNQFASYPT 408



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 157/335 (46%), Gaps = 49/335 (14%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ TL + HN+L   P++     NL +LDL +N +  +P +I N   L  L  R N L+ 
Sbjct: 299 NLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLS- 357

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPI-----------------QILDIPT-------- 150
            S+P  + N K++  FN+ GN + Q P                  Q    PT        
Sbjct: 358 -SVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTN 416

Query: 151 LKYLYLGNNSLNHVPREINKLCK-LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
           +  + L +N ++ +P  I    K L  L++  N LT +P   G    +  L L+ N L+ 
Sbjct: 417 VYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQK 476

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           LP  I NL+ L+ L+L NN L+ +P  I  L+    KL+ L L  N++  LP EI  L  
Sbjct: 477 LPDDIMNLQNLEILILSNNMLKKIPNTIGNLR----KLRILDLEENRIEVLPHEIGLLHE 532

Query: 270 LSELSLRDNPLVIRFVSDMTYKPPSLLELASRT-LKVHEIDYSQEHLPQNL--VQYLESA 326
           L  L L+ N         +T  P S+  L + T L V E +   + LP+ +  ++ LE+ 
Sbjct: 533 LQRLILQTN--------QITMLPRSIGHLGNLTHLSVSENNL--QFLPEEIGSLESLENL 582

Query: 327 HHCVNPKCKGVFFDNRI-EHIKF--VDFCGKYRIP 358
           +   NP  + + F+  + +++K+  +D C    IP
Sbjct: 583 YINQNPGLEKLPFELALCQNLKYLNIDKCPLSTIP 617



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 108/226 (47%), Gaps = 7/226 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           + E I  L L  ++++  P    +  +L  L L +N+I  LP  I     L  L    N 
Sbjct: 158 RDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENS 217

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  SLP+ + N   LKV +L  N+L + P  I  + +L  LYL  N +  V  ++ +L 
Sbjct: 218 LT--SLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLV 275

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L +LSL  N + ++    G L  L  L +S N LE LP  I N   L +L L +N+L  
Sbjct: 276 NLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLD 335

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           +P  I  LK L      L +  N+L ++P  +   K + E ++  N
Sbjct: 336 IPDSIGNLKSLVR----LGMRYNRLSSVPATLKNCKSMDEFNVEGN 377



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 13/165 (7%)

Query: 34  LDSETLATQIEL-LPNNDYNKKP------ENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           LD  T    +EL L  N   K P      +N++ L+L +N L   P+       LR LDL
Sbjct: 456 LDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDL 515

Query: 87  SNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI 145
             NRI  LP  I     L  LI + N +T   LP+ + +L NL   ++S N L+  P +I
Sbjct: 516 EENRIEVLPHEIGLLHELQRLILQTNQITM--LPRSIGHLGNLTHLSVSENNLQFLPEEI 573

Query: 146 LDIPTLKYLYLGNN-SLNHVPREINKLCK-LHVLSLGGNSLTDIP 188
             + +L+ LY+  N  L  +P E+  LC+ L  L++    L+ IP
Sbjct: 574 GSLESLENLYINQNPGLEKLPFEL-ALCQNLKYLNIDKCPLSTIP 617


>gi|390353917|ref|XP_790260.3| PREDICTED: uncharacterized protein LOC585336 [Strongylocentrotus
            purpuratus]
          Length = 2649

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/253 (31%), Positives = 121/253 (47%), Gaps = 16/253 (6%)

Query: 66   NNLSFFPDNASKFTNLRSLDLSNNRITH--LPQAITNFPLSTLIARNNLLTAESLPKDMS 123
            N L   P    + TN+++L  +NN + H  L Q  +   L TL  RN      ++P  + 
Sbjct: 1552 NKLEILPPQMRRLTNIQTLIFNNNPLLHSQLRQLTSMTQLQTLHLRNTQRNLTNIPPQLD 1611

Query: 124  NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
             L NL   +LS N LE  P     + +LK L L NN +  +   I+   +L  L++  N 
Sbjct: 1612 ALVNLADVDLSYNDLESVPDAFYSLSSLKRLNLSNNCITQL-SAIDSWTRLETLNVARNK 1670

Query: 184  LTDIPDTFGDLYQLEALILSDNQLE--SLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
            LT +P T   L  L+ LI+S NQ++   LP  IS L  L+  +  +N+L ++P  I    
Sbjct: 1671 LTSLPPTLCKLISLKRLIISGNQIDFDGLPTGISKLVALEQFIAADNRLESVPEGI---- 1726

Query: 242  CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASR 301
            C   K+K L+L  N+L TLP  I  +  L  L +RDNP       D+   P  + +    
Sbjct: 1727 CRCPKIKKLILTKNRLYTLPEAIHFITDLETLDVRDNP-------DLVMPPKPIPQQIGS 1779

Query: 302  TLKVHEIDYSQEH 314
              + + ID+S  H
Sbjct: 1780 GAEYYNIDFSLSH 1792



 Score = 55.8 bits (133), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 112/242 (46%), Gaps = 32/242 (13%)

Query: 61   LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
            L L   NL   PD  S+   L  L +S N +  +   +     L TL  R+N +    +P
Sbjct: 1429 LRLNQTNLEMLPDELSQLNKLEHLHMSRNNLIQIHGDLPTMQCLRTLNLRHNKIRNSGIP 1488

Query: 120  KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             D+  L+++ V + S NQ                       L+ +P ++ K   L VL+L
Sbjct: 1489 NDIFILEDMTVVDFSHNQ-----------------------LSAIPEDMEKAKSLLVLNL 1525

Query: 180  GGNSLTDIPDT-FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
              N++ +IP   F +L  L  +  SDN+LE LP  +  L  +++L+ +NN L  L +++ 
Sbjct: 1526 SFNNIKEIPSQLFMNLTDLIYINFSDNKLEILPPQMRRLTNIQTLIFNNNPL--LHSQLR 1583

Query: 239  TLKCLSEKLKSLLLHNNK--LRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
             L  +++ L++L L N +  L  +P ++  L  L+++ L  N L    V D  Y   SL 
Sbjct: 1584 QLTSMTQ-LQTLHLRNTQRNLTNIPPQLDALVNLADVDLSYNDL--ESVPDAFYSLSSLK 1640

Query: 297  EL 298
             L
Sbjct: 1641 RL 1642


>gi|260826181|ref|XP_002608044.1| hypothetical protein BRAFLDRAFT_74993 [Branchiostoma floridae]
 gi|229293394|gb|EEN64054.1| hypothetical protein BRAFLDRAFT_74993 [Branchiostoma floridae]
          Length = 997

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 87/275 (31%), Positives = 134/275 (48%), Gaps = 21/275 (7%)

Query: 22  VSIKTLDFSYSSLDS------ETLATQIELLPNNDYNKKPENIDTLLLY------HNNLS 69
            S+  LD SY+ L S      +    Q   L  N     P+ I  L L       +N L+
Sbjct: 96  ASVTELDLSYNKLKSVPQEINQLQRLQKFFLSQNYIQVLPQGICELFLLEELDISYNYLT 155

Query: 70  FFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIA---RNNLLTAESLPKDMSNLK 126
           + P    +   LR+LDL +N+I ++PQ +  F L  L+     +N   +  LP +++ L 
Sbjct: 156 YLPVKFGQLKRLRTLDLDHNKIPYIPQQV--FELRELVEFDFSHNTAISGPLPCNVAFLT 213

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL+V  LS N L   P  I D+  L+ L L NN L+++P +   L ++ VL+LG N    
Sbjct: 214 NLQVLWLSSNGLTLLPNCIKDLVLLEELILDNNKLHNLPCDFEHLQRVKVLNLGFNCYEI 273

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
            P     L ++E L LS N+L  +P  I  L+ L+ L L +N + ++P  I  L  + E 
Sbjct: 274 FPHAVLALNRVEELFLSRNKLSHIPEEIGLLEHLRVLWLDHNNVESIPDSITKLVNMEE- 332

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
              L +  N+L+ LP     L  L  L +R+NPL+
Sbjct: 333 ---LSVQGNRLKCLPEGFGKLSNLDCLDVRENPLL 364



 Score = 87.4 bits (215), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/167 (37%), Positives = 88/167 (52%), Gaps = 3/167 (1%)

Query: 72  PDNASKFTNLRSLDLSNNRITHLPQAITNFPL-STLIARNNLLTAESLPKDMSNLKNLKV 130
           P N +  TNL+ L LS+N +T LP  I +  L   LI  NN L   +LP D  +L+ +KV
Sbjct: 206 PCNVAFLTNLQVLWLSSNGLTLLPNCIKDLVLLEELILDNNKL--HNLPCDFEHLQRVKV 263

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NL  N  E FP  +L +  ++ L+L  N L+H+P EI  L  L VL L  N++  IPD+
Sbjct: 264 LNLGFNCYEIFPHAVLALNRVEELFLSRNKLSHIPEEIGLLEHLRVLWLDHNNVESIPDS 323

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
              L  +E L +  N+L+ LP     L  L  L +  N L   P ++
Sbjct: 324 ITKLVNMEELSVQGNRLKCLPEGFGKLSNLDCLDVRENPLLQPPLDV 370



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 102/241 (42%), Gaps = 44/241 (18%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPK 120
           L L+   L   P   ++   L  LDL  N +  LP   +++                   
Sbjct: 31  LSLWDKGLERVPSELTQLAELHVLDLGGNNLKELPSGFSHY------------------- 71

Query: 121 DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
               L NL V +L  N    FP QILD+ ++  L L  N L  VP+EIN+L +L    L 
Sbjct: 72  ----LTNLGVLDLKKNNFASFPEQILDLASVTELDLSYNKLKSVPQEINQLQRLQKFFLS 127

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
            N +  +P    +L+ LE L +S N L  LP     LK L++L L +NK+  +P ++  L
Sbjct: 128 QNYIQVLPQGICELFLLEELDISYNYLTYLPVKFGQLKRLRTLDLDHNKIPYIPQQVFEL 187

Query: 241 KCLSE---------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           + L E                      L+ L L +N L  LP  I  L  L EL L +N 
Sbjct: 188 RELVEFDFSHNTAISGPLPCNVAFLTNLQVLWLSSNGLTLLPNCIKDLVLLEELILDNNK 247

Query: 280 L 280
           L
Sbjct: 248 L 248



 Score = 79.3 bits (194), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 112/248 (45%), Gaps = 32/248 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L  NN + FP+      ++  LDLS N++  +PQ I     L       N +  
Sbjct: 74  NLGVLDLKKNNFASFPEQILDLASVTELDLSYNKLKSVPQEINQLQRLQKFFLSQNYI-- 131

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK----- 170
           + LP+ +  L  L+  ++S N L   P++   +  L+ L L +N + ++P+++ +     
Sbjct: 132 QVLPQGICELFLLEELDISYNYLTYLPVKFGQLKRLRTLDLDHNKIPYIPQQVFELRELV 191

Query: 171 --------------------LCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
                               L  L VL L  N LT +P+   DL  LE LIL +N+L +L
Sbjct: 192 EFDFSHNTAISGPLPCNVAFLTNLQVLWLSSNGLTLLPNCIKDLVLLEELILDNNKLHNL 251

Query: 211 PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
           P    +L+ +K L L  N     P  ++ L     +++ L L  NKL  +P EI  L+ L
Sbjct: 252 PCDFEHLQRVKVLNLGFNCYEIFPHAVLALN----RVEELFLSRNKLSHIPEEIGLLEHL 307

Query: 271 SELSLRDN 278
             L L  N
Sbjct: 308 RVLWLDHN 315


>gi|395860100|ref|XP_003802353.1| PREDICTED: protein scribble homolog isoform 2 [Otolemur garnettii]
          Length = 1641

 Score =  102 bits (253), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 87/274 (31%), Positives = 125/274 (45%), Gaps = 42/274 (15%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N LS  PD  ++  +L  L L++  +  LP  + N   L TL  R NLL  +SLP  +S 
Sbjct: 115 NPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLL--KSLPASLSF 172

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L  L+  +L GN LE  P  +  +P L+ L+L  N L+ +P E+  L +L  L +  N L
Sbjct: 173 LVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 185 TDIP-----------------------DTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
            ++P                       D  G L QL  L +  N+L  +P +I + + L 
Sbjct: 233 EELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVPEAIGDCENLS 292

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L+L  N L  LP  +  L     KL +L +  N L  LP EI     LS LSLRDN L 
Sbjct: 293 ELILTENLLTALPHSLGKLT----KLTNLNVDRNHLEVLPPEIGGCVALSVLSLRDNRLA 348

Query: 282 IRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHL 315
           +         PP L    + T ++H +D +   L
Sbjct: 349 VL--------PPEL----AHTAELHVLDVAGNRL 370



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 77/225 (34%), Positives = 112/225 (49%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ TL L  N L   P + S    L  LDL  N +  LP  +   P L  L    N L+A
Sbjct: 152 NLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSA 211

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP ++ NL+ L   ++S N+LE+ P ++  +  L  L L  N L  +P  I +L +L 
Sbjct: 212 --LPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N L ++P+  GD   L  LIL++N L +LP S+  L  L +L +  N L  LP 
Sbjct: 270 ILKVDQNRLCEVPEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI    C++  L  L L +N+L  LP E+     L  L +  N L
Sbjct: 330 EI--GGCVA--LSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRL 370



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 70/219 (31%), Positives = 101/219 (46%), Gaps = 10/219 (4%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLP-QAITNF 101
           +E+LP  D      N+  L L  N LS  P        L  LD+S NR+  LP +     
Sbjct: 186 LEVLP--DTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLV 243

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L+ L+   NLL  + LP  +  LK L +  +  N+L + P  I D   L  L L  N L
Sbjct: 244 LLTDLLLSQNLL--QRLPDGIGQLKQLSILKVDQNRLCEVPEAIGDCENLSELILTENLL 301

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +P  + KL KL  L++  N L  +P   G    L  L L DN+L  LP  +++   L 
Sbjct: 302 TALPHSLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELH 361

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L +  N+LR+LP  +  L      LK+L L  N+ + +
Sbjct: 362 VLDVAGNRLRSLPFALTHL-----NLKALWLAENQAQPM 395


>gi|395860098|ref|XP_003802352.1| PREDICTED: protein scribble homolog isoform 1 [Otolemur garnettii]
          Length = 1616

 Score =  102 bits (253), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 87/274 (31%), Positives = 125/274 (45%), Gaps = 42/274 (15%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N LS  PD  ++  +L  L L++  +  LP  + N   L TL  R NLL  +SLP  +S 
Sbjct: 115 NPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLL--KSLPASLSF 172

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L  L+  +L GN LE  P  +  +P L+ L+L  N L+ +P E+  L +L  L +  N L
Sbjct: 173 LVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 185 TDIP-----------------------DTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
            ++P                       D  G L QL  L +  N+L  +P +I + + L 
Sbjct: 233 EELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVPEAIGDCENLS 292

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L+L  N L  LP  +  L     KL +L +  N L  LP EI     LS LSLRDN L 
Sbjct: 293 ELILTENLLTALPHSLGKLT----KLTNLNVDRNHLEVLPPEIGGCVALSVLSLRDNRLA 348

Query: 282 IRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHL 315
           +         PP L    + T ++H +D +   L
Sbjct: 349 VL--------PPEL----AHTAELHVLDVAGNRL 370



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 77/225 (34%), Positives = 112/225 (49%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ TL L  N L   P + S    L  LDL  N +  LP  +   P L  L    N L+A
Sbjct: 152 NLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSA 211

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP ++ NL+ L   ++S N+LE+ P ++  +  L  L L  N L  +P  I +L +L 
Sbjct: 212 --LPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N L ++P+  GD   L  LIL++N L +LP S+  L  L +L +  N L  LP 
Sbjct: 270 ILKVDQNRLCEVPEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI    C++  L  L L +N+L  LP E+     L  L +  N L
Sbjct: 330 EI--GGCVA--LSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRL 370



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 70/219 (31%), Positives = 101/219 (46%), Gaps = 10/219 (4%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLP-QAITNF 101
           +E+LP  D      N+  L L  N LS  P        L  LD+S NR+  LP +     
Sbjct: 186 LEVLP--DTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLV 243

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L+ L+   NLL  + LP  +  LK L +  +  N+L + P  I D   L  L L  N L
Sbjct: 244 LLTDLLLSQNLL--QRLPDGIGQLKQLSILKVDQNRLCEVPEAIGDCENLSELILTENLL 301

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +P  + KL KL  L++  N L  +P   G    L  L L DN+L  LP  +++   L 
Sbjct: 302 TALPHSLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELH 361

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L +  N+LR+LP  +  L      LK+L L  N+ + +
Sbjct: 362 VLDVAGNRLRSLPFALTHL-----NLKALWLAENQAQPM 395


>gi|198433833|ref|XP_002122418.1| PREDICTED: similar to Leucine-rich repeat protein SHOC-2
           (Ras-binding protein Sur-8) [Ciona intestinalis]
          Length = 531

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 80/245 (32%), Positives = 116/245 (47%), Gaps = 35/245 (14%)

Query: 46  LPNNDYNKKPE-------NIDTLLLYHNNLSFFP-DNASKFTNLRSLDLSNNRITHLPQA 97
           L NND    P+       N+ ++ L  N  S +P    S+FT+L +L++ +N++  +P  
Sbjct: 264 LENNDIETLPDGFLSSLTNLTSVTLARNKFSSYPVGGPSQFTSLGTLNMEHNQVDRIPFE 323

Query: 98  ITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
           I                        S   +L   N+  NQL   P+ +    ++  L L 
Sbjct: 324 I-----------------------FSRATHLSTLNMRSNQLTSLPLDVGSWKSMVELCLN 360

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
           +N L  +P +I KL  L VL +  N L  IP + G L  L+ L L +N LESLP+ I +L
Sbjct: 361 SNQLTRLPDDIGKLQSLQVLMVSNNLLRKIPGSIGQLTNLQCLDLEENNLESLPSEIEHL 420

Query: 218 KMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRD 277
             L+ L L  NKL  LP  +  L  L+     L +  N++R LP EI  LK L EL L D
Sbjct: 421 TQLRKLKLQGNKLTVLPRGLGHLSNLT----ILAVGENQMRDLPNEIGNLKSLEELYLND 476

Query: 278 NPLVI 282
           NPL +
Sbjct: 477 NPLQV 481



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 75/251 (29%), Positives = 119/251 (47%), Gaps = 12/251 (4%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           + LY N L+  PD   +  NL  L L+ N +T LP ++ N   L  L  R+N L    +P
Sbjct: 78  IFLYQNKLAKVPDELGQLVNLTILALNENHLTSLPASLQNLKQLKMLDLRHNKL--REVP 135

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
           + +  L++L+   L  N++      I ++  L  L +  N +  +P EI KL +L  + +
Sbjct: 136 QVVYQLQSLRKLYLRFNKITTIDPAIENLSNLTQLIIRENKVREIPSEIGKLTQLVTIDV 195

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L +IP+  G+   +  L L  N+L  LP SI NL  L  L L  N L  LP  +  
Sbjct: 196 SYNELKEIPEEIGNCRLVTFLDLQYNRLTQLPESIGNLVKLNRLGLKYNHLLGLPRSLQN 255

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEII-TLKCLSELSLRDNPLVIRFVSDMTYKPPSLLEL 298
              LS+    L L NN + TLP   + +L  L+ ++L  N    +F S     P     L
Sbjct: 256 CVLLSD----LNLENNDIETLPDGFLSSLTNLTSVTLARN----KFSSYPVGGPSQFTSL 307

Query: 299 ASRTLKVHEID 309
            +  ++ +++D
Sbjct: 308 GTLNMEHNQVD 318



 Score = 73.9 bits (180), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 102/218 (46%), Gaps = 17/218 (7%)

Query: 32  SSLDSETLATQIE--------LLPNNDYNKKPE------NIDTLLLYHNNLSFFPDNASK 77
           S LD  +L+T I+         L  N   K P+      N+  L L  N+L+  P +   
Sbjct: 58  SQLDLTSLSTTIKNMTQLCEIFLYQNKLAKVPDELGQLVNLTILALNENHLTSLPASLQN 117

Query: 78  FTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGN 136
              L+ LDL +N++  +PQ +     L  L  R N +T  ++   + NL NL    +  N
Sbjct: 118 LKQLKMLDLRHNKLREVPQVVYQLQSLRKLYLRFNKIT--TIDPAIENLSNLTQLIIREN 175

Query: 137 QLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQ 196
           ++ + P +I  +  L  + +  N L  +P EI     +  L L  N LT +P++ G+L +
Sbjct: 176 KVREIPSEIGKLTQLVTIDVSYNELKEIPEEIGNCRLVTFLDLQYNRLTQLPESIGNLVK 235

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
           L  L L  N L  LP S+ N  +L  L L NN + TLP
Sbjct: 236 LNRLGLKYNHLLGLPRSLQNCVLLSDLNLENNDIETLP 273


>gi|380011078|ref|XP_003689640.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Apis florea]
          Length = 610

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/244 (35%), Positives = 127/244 (52%), Gaps = 11/244 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNA-SKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           ++ T+ L  N  + +P    ++FTN+ S++L +N+I  +P  I +    L+ L  + N L
Sbjct: 361 DLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLNMKENQL 420

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA  LP D+    N+   NL  NQL + P  I  +  L+ L L NN L  +P  I  L K
Sbjct: 421 TA--LPLDIGTWINMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRK 478

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L VL L  N +  +P+  G L  L+ LIL  NQ+ SLP +I +L  L  L +  N L  L
Sbjct: 479 LRVLDLEENKIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYL 538

Query: 234 PTEIITLKCLSEKLKSLLLHNNK-LRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKP 292
           P EI TL    E L SL +++N  L  LP E+     LS +S+ + PL  +   ++    
Sbjct: 539 PEEIGTL----ENLDSLYVNDNANLHNLPFELALCTNLSIMSIENCPLS-QIPPEIVAGG 593

Query: 293 PSLL 296
           PSL+
Sbjct: 594 PSLV 597



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/273 (29%), Positives = 130/273 (47%), Gaps = 9/273 (3%)

Query: 9   SSSDSSDSDSFKTVSIKTLDFSYSSLDSETLAT-QIELLPNNDYNK-KPENIDTLLLYHN 66
           SS+  +  D+ KTV++K  + +     ++     Q +L  + ++ + + E ++ L L  +
Sbjct: 80  SSASIAGPDTKKTVTVKHPESNKPKPTTKKGKPIQADLDVSKEFTRCREECLERLDLSKS 139

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNL 125
           N++  P      T+L    L  N++  LP  I     L TL    N LT  SLP  + NL
Sbjct: 140 NITHLPSTVRDLTHLVEFYLYGNKLVTLPPEIGCLGNLETLALSENSLT--SLPNTLENL 197

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
           K+L+V +L  N+L + P  +  +  L  L+L  N + +V   I  L  L +LSL  N + 
Sbjct: 198 KSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRYVSDNIRNLTNLTMLSLRENKIR 257

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           ++P   G L  L    +S N LE LP  I N   L +L L +N+L  +P  I  L  L+ 
Sbjct: 258 ELPAGIGKLINLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLDIPDTIGNLISLTR 317

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
               L L  N+L  +P  +   K + E S+  N
Sbjct: 318 ----LGLRYNRLTNIPKSLANCKLMDEFSVEGN 346



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 11/184 (5%)

Query: 14  SDSDSFKTVSIKTLDFSYSSLDSETLATQIEL-LPNNDYNKKP------ENIDTLLLYHN 66
           S + +   +++K    +   LD  T    +EL L  N   K P      +N++ L+L +N
Sbjct: 405 SRAKNLAKLNMKENQLTALPLDIGTWINMVELNLGTNQLTKIPDDIQCLQNLEVLILSNN 464

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNL 125
            L   P + +    LR LDL  N+I  LP  I     L  LI ++N +T  SLP+ + +L
Sbjct: 465 LLKRIPASIANLRKLRVLDLEENKIESLPNEIGFLRDLQKLILQSNQVT--SLPRAIGHL 522

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS-LNHVPREINKLCKLHVLSLGGNSL 184
            NL   ++  N L   P +I  +  L  LY+ +N+ L+++P E+     L ++S+    L
Sbjct: 523 TNLTYLSVGENNLNYLPEEIGTLENLDSLYVNDNANLHNLPFELALCTNLSIMSIENCPL 582

Query: 185 TDIP 188
           + IP
Sbjct: 583 SQIP 586


>gi|456823115|gb|EMF71585.1| leucine rich repeat protein [Leptospira interrogans serovar
           Canicola str. LT1962]
          Length = 287

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 77/195 (39%), Positives = 105/195 (53%), Gaps = 9/195 (4%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI--TNFPLSTLIARNNLLTAESLPKDM 122
           +N L   P    +  NL+ L L +N++T L + I          ++ N L   ++LPK++
Sbjct: 80  YNQLKTLPKEIDQLKNLQRLYLMDNQLTILSKEIGQLQNLQLLNLSYNQL---KTLPKEI 136

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
             LKNL+  +L  NQL   P +I  +  L  LYLG+N L  +P+EI +L  LH L L  N
Sbjct: 137 EQLKNLQTLDLGSNQLTVLPQEIGQLENLHELYLGSNQLIVLPQEIGQLENLHELDLSSN 196

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            L  +P     L  L+ L L  NQL +LP  I  LK LK L L++N+L TLP EI  LK 
Sbjct: 197 RLKILPKEIKQLKNLQKLYLDYNQLTTLPQEIGQLKNLKWLYLYSNQLATLPKEIEQLK- 255

Query: 243 LSEKLKSLLLHNNKL 257
               LKSL L NN+L
Sbjct: 256 ---NLKSLNLKNNQL 267



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 85/198 (42%), Positives = 113/198 (57%), Gaps = 7/198 (3%)

Query: 87  SNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI 145
           S N++  LP+ I     L  L   +N LT   L K++  L+NL++ NLS NQL+  P +I
Sbjct: 79  SYNQLKTLPKEIDQLKNLQRLYLMDNQLTI--LSKEIGQLQNLQLLNLSYNQLKTLPKEI 136

Query: 146 LDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDN 205
             +  L+ L LG+N L  +P+EI +L  LH L LG N L  +P   G L  L  L LS N
Sbjct: 137 EQLKNLQTLDLGSNQLTVLPQEIGQLENLHELYLGSNQLIVLPQEIGQLENLHELDLSSN 196

Query: 206 QLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEII 265
           +L+ LP  I  LK L+ L L  N+L TLP EI  LK     LK L L++N+L TLP EI 
Sbjct: 197 RLKILPKEIKQLKNLQKLYLDYNQLTTLPQEIGQLK----NLKWLYLYSNQLATLPKEIE 252

Query: 266 TLKCLSELSLRDNPLVIR 283
            LK L  L+L++N L I 
Sbjct: 253 QLKNLKSLNLKNNQLSIE 270



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 68/167 (40%), Positives = 92/167 (55%), Gaps = 4/167 (2%)

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           + L K + N  ++ V NLS  +L+  PI+I  +  L+ L L  N L  +P+EI++L  L 
Sbjct: 38  QDLTKALQNPLDVLVLNLSRQELKTLPIEIGQLKNLQLLNLSYNQLKTLPKEIDQLKNLQ 97

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +    G L  L+ L LS NQL++LP  I  LK L++L L +N+L  LP 
Sbjct: 98  RLYLMDNQLTILSKEIGQLQNLQLLNLSYNQLKTLPKEIEQLKNLQTLDLGSNQLTVLPQ 157

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           EI  L    E L  L L +N+L  LP EI  L+ L EL L  N L I
Sbjct: 158 EIGQL----ENLHELYLGSNQLIVLPQEIGQLENLHELDLSSNRLKI 200



 Score = 59.3 bits (142), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/125 (38%), Positives = 64/125 (51%), Gaps = 7/125 (5%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           EN+  L L  N L   P    +  NL  LDLS+NR+  LP+ I     L  L    N LT
Sbjct: 163 ENLHELYLGSNQLIVLPQEIGQLENLHELDLSSNRLKILPKEIKQLKNLQKLYLDYNQLT 222

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE-INKL-- 171
             +LP+++  LKNLK   L  NQL   P +I  +  LK L L NN L+   +E I KL  
Sbjct: 223 --TLPQEIGQLKNLKWLYLYSNQLATLPKEIEQLKNLKSLNLKNNQLSIEEKERIRKLLP 280

Query: 172 -CKLH 175
            C+++
Sbjct: 281 KCQIY 285


>gi|410904062|ref|XP_003965512.1| PREDICTED: malignant fibrous histiocytoma-amplified sequence 1
           homolog [Takifugu rubripes]
          Length = 1024

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 118/239 (49%), Gaps = 24/239 (10%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPL--STLIARNNLLTAESLPKDM 122
           HN L    ++  +   L+ L +S+N+I HLP  I    L     I+ N+L     +P+  
Sbjct: 122 HNCLRSLSEDVGQLKGLKKLCISHNKIQHLPLQIAALQLLEELDISFNDL---HDIPRFF 178

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
           S+L NL+  +   N+L QFP +IL + +L+ L    N    +P +I KL  L +L L   
Sbjct: 179 SSLVNLRTLDADHNKLNQFPPEILALGSLEELDCSGNKFESLPADIMKLKFLKILWLSSL 238

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKC 242
            +  +PDTF  L  LE+L+L  N L +LP +   L+ LK L L +NK  + P  I+++  
Sbjct: 239 HIPILPDTFCQLQNLESLMLDGNNLSALPVNFGQLQSLKMLNLSSNKFESFPDVILSITG 298

Query: 243 LS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           L                    EKL +L L NN +  LP  I+ L+ L EL L+ N + I
Sbjct: 299 LEELYLSRNKLSHIPEEIGHLEKLDNLWLDNNNITYLPDSIVDLEMLEELVLQGNQIAI 357



 Score = 97.8 bits (242), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 95/285 (33%), Positives = 135/285 (47%), Gaps = 24/285 (8%)

Query: 4   NYGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLAT---QIELLPNNDYNKKPENI-- 58
            +G S+  D  +    KTV +    +  ++L S  L +   Q+ L   +D    PE+I  
Sbjct: 14  GFGCSAMEDKENK--LKTVRL----WRDAALRSRKLRSNLRQLTLCSKDDQIVLPEDIAE 67

Query: 59  -DTLLLYHNNLSFFPDN-ASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIA---RNNLL 113
            + L L +N+L   PD   S   NLR L L  NR T +P+A+  F L  L+     +N L
Sbjct: 68  IELLNLGNNSLHELPDGLGSTLNNLRILVLRRNRFTAVPRAV--FELGQLVELDMSHNCL 125

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
              SL +D+  LK LK   +S N+++  P+QI  +  L+ L +  N L+ +PR  + L  
Sbjct: 126 --RSLSEDVGQLKGLKKLCISHNKIQHLPLQIAALQLLEELDISFNDLHDIPRFFSSLVN 183

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L    N L   P     L  LE L  S N+ ESLPA I  LK LK L L +  +  L
Sbjct: 184 LRTLDADHNKLNQFPPEILALGSLEELDCSGNKFESLPADIMKLKFLKILWLSSLHIPIL 243

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           P       C  + L+SL+L  N L  LP     L+ L  L+L  N
Sbjct: 244 PDTF----CQLQNLESLMLDGNNLSALPVNFGQLQSLKMLNLSSN 284



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/268 (31%), Positives = 116/268 (43%), Gaps = 33/268 (12%)

Query: 1   MSYNYGSSSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIEL-LPNNDYNKKPE--- 56
           MS+N   S S D       K + I      +  L    L    EL +  ND +  P    
Sbjct: 120 MSHNCLRSLSEDVGQLKGLKKLCISHNKIQHLPLQIAALQLLEELDISFNDLHDIPRFFS 179

Query: 57  ---NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP----------- 102
              N+ TL   HN L+ FP       +L  LD S N+   LP  I               
Sbjct: 180 SLVNLRTLDADHNKLNQFPPEILALGSLEELDCSGNKFESLPADIMKLKFLKILWLSSLH 239

Query: 103 -------------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIP 149
                        L +L+   N L+A  LP +   L++LK+ NLS N+ E FP  IL I 
Sbjct: 240 IPILPDTFCQLQNLESLMLDGNNLSA--LPVNFGQLQSLKMLNLSSNKFESFPDVILSIT 297

Query: 150 TLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
            L+ LYL  N L+H+P EI  L KL  L L  N++T +PD+  DL  LE L+L  NQ+  
Sbjct: 298 GLEELYLSRNKLSHIPEEIGHLEKLDNLWLDNNNITYLPDSIVDLEMLEELVLQGNQIAI 357

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEI 237
           LP +   L  +    + +N L   P E+
Sbjct: 358 LPDNFGKLSRVNIWKVKDNPLIQPPYEV 385



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 72/225 (32%), Positives = 108/225 (48%), Gaps = 7/225 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAE 116
           ++ L +  N+L   P   S   NLR+LD  +N++   P  I     L  L    N    E
Sbjct: 161 LEELDISFNDLHDIPRFFSSLVNLRTLDADHNKLNQFPPEILALGSLEELDCSGN--KFE 218

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           SLP D+  LK LK+  LS   +   P     +  L+ L L  N+L+ +P    +L  L +
Sbjct: 219 SLPADIMKLKFLKILWLSSLHIPILPDTFCQLQNLESLMLDGNNLSALPVNFGQLQSLKM 278

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+L  N     PD    +  LE L LS N+L  +P  I +L+ L +L L NN +  LP  
Sbjct: 279 LNLSSNKFESFPDVILSITGLEELYLSRNKLSHIPEEIGHLEKLDNLWLDNNNITYLPDS 338

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I+ L+ L E    L+L  N++  LP     L  ++   ++DNPL+
Sbjct: 339 IVDLEMLEE----LVLQGNQIAILPDNFGKLSRVNIWKVKDNPLI 379



 Score = 58.9 bits (141), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 86/170 (50%), Gaps = 27/170 (15%)

Query: 171 LCKLHVLSLGGNSLTDIPDTFGD-LYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           + ++ +L+LG NSL ++PD  G  L  L  L+L  N+  ++P ++  L  L  L + +N 
Sbjct: 65  IAEIELLNLGNNSLHELPDGLGSTLNNLRILVLRRNRFTAVPRAVFELGQLVELDMSHNC 124

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL--VIRFVSD 287
           LR+L  ++  LK     LK L + +NK++ LP +I  L+ L EL +  N L  + RF S 
Sbjct: 125 LRSLSEDVGQLK----GLKKLCISHNKIQHLPLQIAALQLLEELDISFNDLHDIPRFFSS 180

Query: 288 MT-------------YKPPSLLELASRTLKVHEIDYSQ---EHLPQNLVQ 321
           +                PP +L L S    + E+D S    E LP ++++
Sbjct: 181 LVNLRTLDADHNKLNQFPPEILALGS----LEELDCSGNKFESLPADIMK 226


>gi|328779859|ref|XP_003249714.1| PREDICTED: leucine-rich repeat protein soc-2 homolog [Apis
           mellifera]
          Length = 565

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/244 (35%), Positives = 127/244 (52%), Gaps = 11/244 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNA-SKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           ++ T+ L  N  + +P    ++FTN+ S++L +N+I  +P  I +    L+ L  + N L
Sbjct: 316 DLTTITLSRNAFTAYPSGGPAQFTNVYSINLEHNKIDKIPYGIFSRAKNLAKLNMKENQL 375

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA  LP D+    N+   NL  NQL + P  I  +  L+ L L NN L  +P  I  L K
Sbjct: 376 TA--LPLDIGTWINMVELNLGTNQLTKIPDDIQCLQNLEVLILSNNLLKRIPASIANLRK 433

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L VL L  N +  +P+  G L  L+ LIL  NQ+ SLP +I +L  L  L +  N L  L
Sbjct: 434 LRVLDLEENKIESLPNEIGFLRDLQKLILQSNQVTSLPRAIGHLTNLTYLSVGENNLNYL 493

Query: 234 PTEIITLKCLSEKLKSLLLHNNK-LRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKP 292
           P EI TL    E L SL +++N  L  LP E+     LS +S+ + PL  +   ++    
Sbjct: 494 PEEIGTL----ENLDSLYVNDNANLHNLPFELALCTNLSIMSIENCPLS-QIPPEIVAGG 548

Query: 293 PSLL 296
           PSL+
Sbjct: 549 PSLV 552



 Score = 84.7 bits (208), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 72/226 (31%), Positives = 107/226 (47%), Gaps = 7/226 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           + E ++ L L  +N++  P      T+L    L  N++  LP  I     L TL    N 
Sbjct: 82  REECLERLDLSKSNITHLPSTVRDLTHLIEFYLYGNKLVTLPPEIGCLGNLETLALSENS 141

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  SLP  + NLK+L+V +L  N+L + P  +  +  L  L+L  N + +V   I  L 
Sbjct: 142 LT--SLPNTLENLKSLRVLDLRHNKLSEIPDVVYKLTNLTTLFLRFNRVRYVSDNIRNLT 199

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L +LSL  N + ++P   G L  L    +S N LE LP  I N   L +L L +N+L  
Sbjct: 200 NLTMLSLRENKIRELPAGIGKLINLITFDVSHNHLEHLPEEIGNCVQLSTLDLQHNELLD 259

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           +P  I  L  L+     L L  N+L  +P  +   K + E S+  N
Sbjct: 260 IPDTIGNLISLTR----LGLRYNRLTNIPKSLANCKLMDEFSVEGN 301



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 11/184 (5%)

Query: 14  SDSDSFKTVSIKTLDFSYSSLDSETLATQIEL-LPNNDYNKKP------ENIDTLLLYHN 66
           S + +   +++K    +   LD  T    +EL L  N   K P      +N++ L+L +N
Sbjct: 360 SRAKNLAKLNMKENQLTALPLDIGTWINMVELNLGTNQLTKIPDDIQCLQNLEVLILSNN 419

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNL 125
            L   P + +    LR LDL  N+I  LP  I     L  LI ++N +T  SLP+ + +L
Sbjct: 420 LLKRIPASIANLRKLRVLDLEENKIESLPNEIGFLRDLQKLILQSNQVT--SLPRAIGHL 477

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS-LNHVPREINKLCKLHVLSLGGNSL 184
            NL   ++  N L   P +I  +  L  LY+ +N+ L+++P E+     L ++S+    L
Sbjct: 478 TNLTYLSVGENNLNYLPEEIGTLENLDSLYVNDNANLHNLPFELALCTNLSIMSIENCPL 537

Query: 185 TDIP 188
           + IP
Sbjct: 538 SQIP 541


>gi|443707193|gb|ELU02905.1| hypothetical protein CAPTEDRAFT_191186 [Capitella teleta]
          Length = 488

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 147/314 (46%), Gaps = 37/314 (11%)

Query: 80  NLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
            L SL+LS+N++T LP  +     L  L  R N LT  +LP  + +L NL+  ++  N  
Sbjct: 165 QLTSLNLSSNKLTELPPEVGCLVGLKYLYLRGNQLT--TLPHSLCHLNNLQALDVQHNLF 222

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
           ++FP  +  +  L+ L + +NSL  +P  I  L  L   S+  N ++ IP+    L  L+
Sbjct: 223 DEFPSCLPHMEGLQCLRIDSNSLTSIPAVIKSLYNLREFSIAFNQISHIPEEISQLRNLQ 282

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L+LS N L  +P+++ +LK L  L +  NK+ TLP+ I+       +L +LL ++N+L 
Sbjct: 283 VLLLSHNMLTHVPSNLGSLKHLVKLDVSYNKIFTLPSSIV----WCSRLNTLLANHNRLV 338

Query: 259 TLPTEIITLKCLSELSLRDNPLVIRFVSDM----------------------------TY 290
            LP +I  L  L E++++ N L     S M                             +
Sbjct: 339 KLPEKIGHLFTLKEINIQCNRLSYLPASVMLMDLKVFKVTGNPLLTSAPKANEQTCCQAW 398

Query: 291 KPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNRIEHIKFVD 350
           +P  L+EL++  +   ++ +    LP  L   L S   C++  C    F + I+   F  
Sbjct: 399 QPLKLIELSAHVIHNQQLRWQPGSLPTELSDLLRSVKFCIH--CDRPLFISFIQSSAFSS 456

Query: 351 FCGKYRIPLLQYLC 364
                ++P  Q++C
Sbjct: 457 CLNGTQLPFYQFIC 470



 Score = 63.9 bits (154), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 112/248 (45%), Gaps = 18/248 (7%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTL-IARNNLLT 114
           N+  L + HN    FP        L+ L + +N +T +P  I + + L    IA N +  
Sbjct: 211 NLQALDVQHNLFDEFPSCLPHMEGLQCLRIDSNSLTSIPAVIKSLYNLREFSIAFNQI-- 268

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+++S L+NL+V  LS N L   P  +  +  L  L +  N +  +P  I    +L
Sbjct: 269 -SHIPEEISQLRNLQVLLLSHNMLTHVPSNLGSLKHLVKLDVSYNKIFTLPSSIVWCSRL 327

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
           + L    N L  +P+  G L+ L+ + +  N+L  LPAS+  L  LK   +  N L T  
Sbjct: 328 NTLLANHNRLVKLPEKIGHLFTLKEINIQCNRLSYLPASVM-LMDLKVFKVTGNPLLTSA 386

Query: 235 TEIITLKCLSE-------KLKSLLLHNNKLR----TLPTEIITLKCLSELSLR-DNPLVI 282
            +     C          +L + ++HN +LR    +LPTE+  L    +  +  D PL I
Sbjct: 387 PKANEQTCCQAWQPLKLIELSAHVIHNQQLRWQPGSLPTELSDLLRSVKFCIHCDRPLFI 446

Query: 283 RFVSDMTY 290
            F+    +
Sbjct: 447 SFIQSSAF 454


>gi|301773446|ref|XP_002922120.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog
           [Ailuropoda melanoleuca]
          Length = 1629

 Score =  102 bits (253), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 70/209 (33%), Positives = 107/209 (51%), Gaps = 9/209 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P    +  NLR L LS+N I  LP  + NF  L  L ++RN++  
Sbjct: 36  SLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDI-- 93

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+ +   K L++ + SGN L + P     + +L +L L + SL  +P ++  L  L
Sbjct: 94  -PEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVSLQALPGDVGNLANL 152

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P +   L +LE L L  N+LE LP ++  L  L+ L L  N+L  LP
Sbjct: 153 VTLELRENLLKSLPASLSFLVKLEQLDLGGNELEVLPDTLGALPNLRELWLDRNQLSALP 212

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTE 263
            E+  L+    +L  L +  N+L  LP E
Sbjct: 213 PELGNLR----RLVCLDVSENRLEELPAE 237



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 76/225 (33%), Positives = 113/225 (50%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ TL L  N L   P + S    L  LDL  N +  LP  +   P L  L    N L+A
Sbjct: 151 NLVTLELRENLLKSLPASLSFLVKLEQLDLGGNELEVLPDTLGALPNLRELWLDRNQLSA 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP ++ NL+ L   ++S N+LE+ P ++  +  L  L L  N L  +P  I +L +L 
Sbjct: 211 --LPPELGNLRRLVCLDVSENRLEELPAELGGLLLLTDLLLSQNLLQRLPDGIGQLKQLS 268

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N L ++ +  GD   L  L+L++N L +LP S+  L  L +L +  N+L  LP 
Sbjct: 269 ILKVDQNRLCEVTEAIGDCENLSELVLTENLLTALPRSLGKLTKLTNLNVDRNRLEVLPP 328

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI    C++  L  L L +N+L TLP E+     L  L +  N L
Sbjct: 329 EI--GGCVA--LSVLSLRDNRLATLPPELAHTAELHVLDVAGNRL 369



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 100/354 (28%), Positives = 144/354 (40%), Gaps = 82/354 (23%)

Query: 29  FSYSSLDSETL--ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           + YS    E L  A Q+  LP   +  +  N+  L L  N +   P   + F  L  LD+
Sbjct: 31  YRYSRSLEELLLDANQLRELPKPFF--RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDV 88

Query: 87  SNNRITHLPQAI-----------TNFPLSTL------------IARNNLLTAESLPKDMS 123
           S N I  +P++I           +  PLS L            +A N++ + ++LP D+ 
Sbjct: 89  SRNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDV-SLQALPGDVG 147

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           NL NL    L  N L+  P  +  +  L+ L LG N L  +P  +  L  L  L L  N 
Sbjct: 148 NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNELEVLPDTLGALPNLRELWLDRNQ 207

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPAS-----------------------ISNLKML 220
           L+ +P   G+L +L  L +S+N+LE LPA                        I  LK L
Sbjct: 208 LSALPPELGNLRRLVCLDVSENRLEELPAELGGLLLLTDLLLSQNLLQRLPDGIGQLKQL 267

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSE-------------------KLKSLLLHNNKLRTLP 261
             L +  N+L  +   I   + LSE                   KL +L +  N+L  LP
Sbjct: 268 SILKVDQNRLCEVTEAIGDCENLSELVLTENLLTALPRSLGKLTKLTNLNVDRNRLEVLP 327

Query: 262 TEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHL 315
            EI     LS LSLRDN L           PP L    + T ++H +D +   L
Sbjct: 328 PEIGGCVALSVLSLRDNRLATL--------PPEL----AHTAELHVLDVAGNRL 369



 Score = 85.9 bits (211), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 70/222 (31%), Positives = 103/222 (46%), Gaps = 10/222 (4%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLP-QAI 98
             ++E+LP  D      N+  L L  N LS  P        L  LD+S NR+  LP +  
Sbjct: 182 GNELEVLP--DTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELG 239

Query: 99  TNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L+ L+   NLL  + LP  +  LK L +  +  N+L +    I D   L  L L  
Sbjct: 240 GLLLLTDLLLSQNLL--QRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELVLTE 297

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +PR + KL KL  L++  N L  +P   G    L  L L DN+L +LP  +++  
Sbjct: 298 NLLTALPRSLGKLTKLTNLNVDRNRLEVLPPEIGGCVALSVLSLRDNRLATLPPELAHTA 357

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L  L +  N+LR+LP  +  L      LK+L L  N+ + +
Sbjct: 358 ELHVLDVAGNRLRSLPFALTHL-----NLKALWLAENQAQPM 394


>gi|330795626|ref|XP_003285873.1| hypothetical protein DICPUDRAFT_149767 [Dictyostelium purpureum]
 gi|325084178|gb|EGC37612.1| hypothetical protein DICPUDRAFT_149767 [Dictyostelium purpureum]
          Length = 1809

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 124/228 (54%), Gaps = 11/228 (4%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           ++ L L +N+ + FP   +  T+L+ LDLS N ++ +P + T    L+ L  ++N  T  
Sbjct: 171 LEELKLSNNSFTVFPSIITDLTSLKVLDLSGNSLSSIPASFTKLSSLTCLNLKSNRFT-- 228

Query: 117 SLPKDMSNLKNLKVFNLSGNQLE----QFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           S P  +  L  L   NL+ NQ+        + +  +PTL+ L L +N     P +I  L 
Sbjct: 229 SFPASICTLNYLHRLNLACNQISINSSHHTLGVSLLPTLERLELQHNKFGEFPIDILDLT 288

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L +L L  N +  +P+  G L  L  L L++N++ +LP++I  +  LK L L  NK+ T
Sbjct: 289 SLKILKLQDNDIEVVPEKIGQLNNLTELFLAENKITTLPSTIGQIVNLKKLYLEYNKIST 348

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           LPT+ + L    +KL  L+LHNN+ +++P EI  L  L  LSL +NPL
Sbjct: 349 LPTDFVKL----QKLNILILHNNEFKSVPEEIHLLTQLLRLSLDENPL 392



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 74/247 (29%), Positives = 107/247 (43%), Gaps = 41/247 (16%)

Query: 72  PDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVF 131
           P N +K + L  L L++N++  LP ++   P   +   N L T  S+   ++  ++L   
Sbjct: 61  PANITKLSYLLELSLTDNKLNSLPWSL---PPPIIQQANRLSTMISISSVVN--ESLVKL 115

Query: 132 NLSGNQLEQFPIQILDIPTLKYLYLGNN-------------SLNHVPREINKLCKLHVLS 178
           +LSGN    FP  +  +P LK L L NN             S+N+   +    CKL  L 
Sbjct: 116 DLSGNHFTDFPSCVFVLPNLKTLILDNNQLTDINVQMCGGSSVNNGTNQPYIACKLEELK 175

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           L  NS T  P    DL  L+ L LS N L S+PAS + L  L  L L +N+  + P  I 
Sbjct: 176 LSNNSFTVFPSIITDLTSLKVLDLSGNSLSSIPASFTKLSSLTCLNLKSNRFTSFPASIC 235

Query: 239 TLKCLSE-----------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
           TL  L                          L+ L L +NK    P +I+ L  L  L L
Sbjct: 236 TLNYLHRLNLACNQISINSSHHTLGVSLLPTLERLELQHNKFGEFPIDILDLTSLKILKL 295

Query: 276 RDNPLVI 282
           +DN + +
Sbjct: 296 QDNDIEV 302



 Score = 47.0 bits (110), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 52/181 (28%), Positives = 80/181 (44%), Gaps = 34/181 (18%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAES 117
           ++ L L HN    FP +    T+L+ L L +N I                        E 
Sbjct: 267 LERLELQHNKFGEFPIDILDLTSLKILKLQDNDI------------------------EV 302

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           +P+ +  L NL    L+ N++   P  I  I  LK LYL  N ++ +P +  KL KL++L
Sbjct: 303 VPEKIGQLNNLTELFLAENKITTLPSTIGQIVNLKKLYLEYNKISTLPTDFVKLQKLNIL 362

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK-----SLLLHNNKLRT 232
            L  N    +P+    L QL  L L +N     P S ++LK++K     SL+ H +   T
Sbjct: 363 ILHNNEFKSVPEEIHLLTQLLRLSLDEN-----PLSSTDLKLIKQEGSLSLIKHKSNFGT 417

Query: 233 L 233
           +
Sbjct: 418 I 418


>gi|301767858|ref|XP_002919342.1| PREDICTED: protein LAP2-like isoform 3 [Ailuropoda melanoleuca]
          Length = 1302

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  +++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 133/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    + GN LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNVT----TLKIDENQLMYLPDSIGGLVSIEEL 304


>gi|418755469|ref|ZP_13311672.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
 gi|409964178|gb|EKO32071.1| leucine rich repeat protein, partial [Leptospira santarosai str.
           MOR084]
          Length = 217

 Score =  102 bits (253), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 92/220 (41%), Positives = 121/220 (55%), Gaps = 7/220 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L  N L+  P+   K  NL+ L L NN++T LP  I     L  L    N LTA  LPK+
Sbjct: 1   LTRNRLANLPEEIGKLQNLQELHLENNQLTTLPIEIGKLQNLQELNLGFNQLTA--LPKE 58

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGG 181
           +  L+NLK  NL  N+L   P +I  +  LK L L +N L  +P+EI KL KL  L+L  
Sbjct: 59  IGKLQNLKDLNLDSNKLTTLPKEIGKLQNLKDLNLDSNKLTTLPKEIEKLQKLKDLNLTY 118

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           N LT +P+  G L  L+ L L  NQL +L   I NL+ LK L L++N+  TLP EI  L 
Sbjct: 119 NQLTALPEEIGKLQNLQELDLHSNQLTTLSQEIGNLQNLKLLNLNDNQFTTLPKEIGNL- 177

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
              +KL+ L L  N+L  LP EI  L+ L +L L +N L 
Sbjct: 178 ---QKLQELDLGYNQLTALPEEIGKLQNLKDLYLNNNKLT 214



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 86/209 (41%), Positives = 114/209 (54%), Gaps = 7/209 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+  L L +N L+  P    K  NL+ L+L  N++T LP+ I     L  L   +N 
Sbjct: 15  KLQNLQELHLENNQLTTLPIEIGKLQNLQELNLGFNQLTALPKEIGKLQNLKDLNLDSNK 74

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LPK++  L+NLK  NL  N+L   P +I  +  LK L L  N L  +P EI KL 
Sbjct: 75  LT--TLPKEIGKLQNLKDLNLDSNKLTTLPKEIEKLQKLKDLNLTYNQLTALPEEIGKLQ 132

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L L  N LT +    G+L  L+ L L+DNQ  +LP  I NL+ L+ L L  N+L  
Sbjct: 133 NLQELDLHSNQLTTLSQEIGNLQNLKLLNLNDNQFTTLPKEIGNLQKLQELDLGYNQLTA 192

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLP 261
           LP EI  L    + LK L L+NNKL TLP
Sbjct: 193 LPEEIGKL----QNLKDLYLNNNKLTTLP 217


>gi|281341441|gb|EFB17025.1| hypothetical protein PANDA_011098 [Ailuropoda melanoleuca]
          Length = 1599

 Score =  102 bits (253), Expect = 4e-19,   Method: Composition-based stats.
 Identities = 70/209 (33%), Positives = 107/209 (51%), Gaps = 9/209 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P    +  NLR L LS+N I  LP  + NF  L  L ++RN++  
Sbjct: 7   SLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDI-- 64

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+ +   K L++ + SGN L + P     + +L +L L + SL  +P ++  L  L
Sbjct: 65  -PEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVSLQALPGDVGNLANL 123

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L  +P +   L +LE L L  N+LE LP ++  L  L+ L L  N+L  LP
Sbjct: 124 VTLELRENLLKSLPASLSFLVKLEQLDLGGNELEVLPDTLGALPNLRELWLDRNQLSALP 183

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTE 263
            E+  L+    +L  L +  N+L  LP E
Sbjct: 184 PELGNLR----RLVCLDVSENRLEELPAE 208



 Score = 99.8 bits (247), Expect = 2e-18,   Method: Composition-based stats.
 Identities = 76/225 (33%), Positives = 113/225 (50%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ TL L  N L   P + S    L  LDL  N +  LP  +   P L  L    N L+A
Sbjct: 122 NLVTLELRENLLKSLPASLSFLVKLEQLDLGGNELEVLPDTLGALPNLRELWLDRNQLSA 181

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP ++ NL+ L   ++S N+LE+ P ++  +  L  L L  N L  +P  I +L +L 
Sbjct: 182 --LPPELGNLRRLVCLDVSENRLEELPAELGGLLLLTDLLLSQNLLQRLPDGIGQLKQLS 239

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N L ++ +  GD   L  L+L++N L +LP S+  L  L +L +  N+L  LP 
Sbjct: 240 ILKVDQNRLCEVTEAIGDCENLSELVLTENLLTALPRSLGKLTKLTNLNVDRNRLEVLPP 299

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI    C++  L  L L +N+L TLP E+     L  L +  N L
Sbjct: 300 EI--GGCVA--LSVLSLRDNRLATLPPELAHTAELHVLDVAGNRL 340



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Composition-based stats.
 Identities = 100/354 (28%), Positives = 144/354 (40%), Gaps = 82/354 (23%)

Query: 29  FSYSSLDSETL--ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           + YS    E L  A Q+  LP   +  +  N+  L L  N +   P   + F  L  LD+
Sbjct: 2   YRYSRSLEELLLDANQLRELPKPFF--RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDV 59

Query: 87  SNNRITHLPQAI-----------TNFPLSTL------------IARNNLLTAESLPKDMS 123
           S N I  +P++I           +  PLS L            +A N++ + ++LP D+ 
Sbjct: 60  SRNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDV-SLQALPGDVG 118

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           NL NL    L  N L+  P  +  +  L+ L LG N L  +P  +  L  L  L L  N 
Sbjct: 119 NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNELEVLPDTLGALPNLRELWLDRNQ 178

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPAS-----------------------ISNLKML 220
           L+ +P   G+L +L  L +S+N+LE LPA                        I  LK L
Sbjct: 179 LSALPPELGNLRRLVCLDVSENRLEELPAELGGLLLLTDLLLSQNLLQRLPDGIGQLKQL 238

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSE-------------------KLKSLLLHNNKLRTLP 261
             L +  N+L  +   I   + LSE                   KL +L +  N+L  LP
Sbjct: 239 SILKVDQNRLCEVTEAIGDCENLSELVLTENLLTALPRSLGKLTKLTNLNVDRNRLEVLP 298

Query: 262 TEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHL 315
            EI     LS LSLRDN L           PP L    + T ++H +D +   L
Sbjct: 299 PEIGGCVALSVLSLRDNRLATL--------PPEL----AHTAELHVLDVAGNRL 340



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Composition-based stats.
 Identities = 70/222 (31%), Positives = 103/222 (46%), Gaps = 10/222 (4%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLP-QAI 98
             ++E+LP  D      N+  L L  N LS  P        L  LD+S NR+  LP +  
Sbjct: 153 GNELEVLP--DTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELG 210

Query: 99  TNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L+ L+   NLL  + LP  +  LK L +  +  N+L +    I D   L  L L  
Sbjct: 211 GLLLLTDLLLSQNLL--QRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELVLTE 268

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +PR + KL KL  L++  N L  +P   G    L  L L DN+L +LP  +++  
Sbjct: 269 NLLTALPRSLGKLTKLTNLNVDRNRLEVLPPEIGGCVALSVLSLRDNRLATLPPELAHTA 328

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L  L +  N+LR+LP  +  L      LK+L L  N+ + +
Sbjct: 329 ELHVLDVAGNRLRSLPFALTHL-----NLKALWLAENQAQPM 365


>gi|260793208|ref|XP_002591604.1| hypothetical protein BRAFLDRAFT_223431 [Branchiostoma floridae]
 gi|229276813|gb|EEN47615.1| hypothetical protein BRAFLDRAFT_223431 [Branchiostoma floridae]
          Length = 889

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 136/296 (45%), Gaps = 32/296 (10%)

Query: 8   SSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNN 67
           S++ D +  D    V+ +  D  +  L +  L T   LLP      K   +  L L  N 
Sbjct: 31  SNNRDITLPDEMSEVAGRITDIKHLDLSNRRLTT---LLPELFGMTK---LKWLNLRDNP 84

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-----------PLSTLIARNNLLT-- 114
           L   P    +  N++ LDLSN ++  LP  +              PL TL A    LT  
Sbjct: 85  LQTLPVEVGQLINVKHLDLSNCKLRTLPPIVGGLTHLEWLNLAFNPLQTLPAEIGQLTNV 144

Query: 115 ---------AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                      +LP ++  L  L+   LS N L+ FP ++  +   K+L L    L  +P
Sbjct: 145 KHLDLWNCQLRTLPHNVGKLTQLEWLRLSSNPLQTFPAEVGQLINFKHLDLPECQLRTLP 204

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
            E+ +L +L  L L  N L  +P   G L  ++ L LS  QL++LP  +  L  L+ L L
Sbjct: 205 PEVGRLTQLERLDLSKNPLQTLPAEVGHLTNIKHLFLSWCQLDTLPPEVGRLTQLEWLSL 264

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            +N L+TLP E+  L      ++ L+L N  L++LP E+  L+ LS+L ++ NP +
Sbjct: 265 SHNPLQTLPVEVGQLS----NIEHLILRNCHLQSLPPEVGKLRRLSDLDVKGNPFL 316



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 76/229 (33%), Positives = 108/229 (47%), Gaps = 11/229 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-----LSTLIARNN 111
           N+  L L   NL   P    K T L +L LSNNR   LP  ++        +  L   N 
Sbjct: 1   NLKLLRLGDCNLDKVPAAVMKLTQLETLILSNNRDITLPDEMSEVAGRITDIKHLDLSNR 60

Query: 112 LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LT  +L  ++  +  LK  NL  N L+  P+++  +  +K+L L N  L  +P  +  L
Sbjct: 61  RLT--TLLPELFGMTKLKWLNLRDNPLQTLPVEVGQLINVKHLDLSNCKLRTLPPIVGGL 118

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
             L  L+L  N L  +P   G L  ++ L L + QL +LP ++  L  L+ L L +N L+
Sbjct: 119 THLEWLNLAFNPLQTLPAEIGQLTNVKHLDLWNCQLRTLPHNVGKLTQLEWLRLSSNPLQ 178

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           T P E+  L       K L L   +LRTLP E+  L  L  L L  NPL
Sbjct: 179 TFPAEVGQLI----NFKHLDLPECQLRTLPPEVGRLTQLERLDLSKNPL 223



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/185 (30%), Positives = 89/185 (48%), Gaps = 9/185 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           N+  L L++  L   P N  K T L  L LS+N +   P  +       LI   +L   E
Sbjct: 143 NVKHLDLWNCQLRTLPHNVGKLTQLEWLRLSSNPLQTFPAEV-----GQLINFKHLDLPE 197

Query: 117 ----SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
               +LP ++  L  L+  +LS N L+  P ++  +  +K+L+L    L+ +P E+ +L 
Sbjct: 198 CQLRTLPPEVGRLTQLERLDLSKNPLQTLPAEVGHLTNIKHLFLSWCQLDTLPPEVGRLT 257

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           +L  LSL  N L  +P   G L  +E LIL +  L+SLP  +  L+ L  L +  N    
Sbjct: 258 QLEWLSLSHNPLQTLPVEVGQLSNIEHLILRNCHLQSLPPEVGKLRRLSDLDVKGNPFLK 317

Query: 233 LPTEI 237
            P E+
Sbjct: 318 PPDEV 322


>gi|418707301|ref|ZP_13268127.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
 gi|410772348|gb|EKR47536.1| leucine rich repeat protein [Leptospira interrogans serovar
           Grippotyphosa str. UI 08368]
          Length = 214

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 72/170 (42%), Positives = 96/170 (56%), Gaps = 4/170 (2%)

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T + L K + N  +++V  LS  +L+  P +I  +  L+ L L NN L  +P+EI +L  
Sbjct: 32  TYKDLTKALQNPLDVRVLELSEQKLKTIPKEIGQLQNLQELNLWNNQLTTLPKEIEQLKN 91

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  L LG N LT +    G L  L+ L L++NQL +LP  I  LK L++L L NN+L TL
Sbjct: 92  LQTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQLTTLPKEIEQLKNLQTLGLGNNQLTTL 151

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
           P EI  L    + LKSL L NN+L  LP EI  LK L  L L +N L I 
Sbjct: 152 PIEIGQL----QNLKSLDLGNNQLTILPKEIGQLKNLQTLYLNNNQLAIE 197



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 62/152 (40%), Positives = 87/152 (57%), Gaps = 3/152 (1%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           ++R L+LS  ++  +P+ I     L  L   NN LT  +LPK++  LKNL+   L  NQL
Sbjct: 45  DVRVLELSEQKLKTIPKEIGQLQNLQELNLWNNQLT--TLPKEIEQLKNLQTLGLGYNQL 102

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
                +I  +  LK L+L NN L  +P+EI +L  L  L LG N LT +P   G L  L+
Sbjct: 103 TTLSQEIGQLQNLKVLFLNNNQLTTLPKEIEQLKNLQTLGLGNNQLTTLPIEIGQLQNLK 162

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKL 230
           +L L +NQL  LP  I  LK L++L L+NN+L
Sbjct: 163 SLDLGNNQLTILPKEIGQLKNLQTLYLNNNQL 194



 Score = 63.5 bits (153), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 62/130 (47%), Gaps = 24/130 (18%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           +N+ TL L +N L+       +  NL+ L L+NN++T                       
Sbjct: 90  KNLQTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQLT----------------------- 126

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LPK++  LKNL+   L  NQL   PI+I  +  LK L LGNN L  +P+EI +L  L 
Sbjct: 127 -TLPKEIEQLKNLQTLGLGNNQLTTLPIEIGQLQNLKSLDLGNNQLTILPKEIGQLKNLQ 185

Query: 176 VLSLGGNSLT 185
            L L  N L 
Sbjct: 186 TLYLNNNQLA 195



 Score = 55.1 bits (131), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 19/129 (14%)

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
           CK+    +   +  D+     +   +  L LS+ +L+++P  I  L+ L+ L L NN+L 
Sbjct: 21  CKIQTEKVEPGTYKDLTKALQNPLDVRVLELSEQKLKTIPKEIGQLQNLQELNLWNNQLT 80

Query: 232 TLPTEIITLKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSE 272
           TLP EI  LK L                    + LK L L+NN+L TLP EI  LK L  
Sbjct: 81  TLPKEIEQLKNLQTLGLGYNQLTTLSQEIGQLQNLKVLFLNNNQLTTLPKEIEQLKNLQT 140

Query: 273 LSLRDNPLV 281
           L L +N L 
Sbjct: 141 LGLGNNQLT 149



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 26/63 (41%), Positives = 35/63 (55%), Gaps = 1/63 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L +N L+  P    +  NL+SLDL NN++T LP+ I     L TL   NN L 
Sbjct: 136 KNLQTLGLGNNQLTTLPIEIGQLQNLKSLDLGNNQLTILPKEIGQLKNLQTLYLNNNQLA 195

Query: 115 AES 117
            E 
Sbjct: 196 IEE 198


>gi|27819886|gb|AAO24991.1| LP05663p [Drosophila melanogaster]
          Length = 527

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/228 (34%), Positives = 123/228 (53%), Gaps = 10/228 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNA-SKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
            + T+ L  N  + +P    ++FTN+ S++L +NRI  +P  I +    L+ L  + N+L
Sbjct: 278 GLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENML 337

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA  LP D+    N+   NL+ N L++ P  I+++  L+ L L NN L  +P  I  L K
Sbjct: 338 TA--LPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRK 395

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N +  +P   G L++L+ LIL  NQ+  LP SI +L  L  L +  N L+ L
Sbjct: 396 LRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFL 455

Query: 234 PTEIITLKCLSEKLKSLLLHNN-KLRTLPTEIITLKCLSELSLRDNPL 280
           P EI +L    E L++L ++ N  L  LP E+   + L  L++   PL
Sbjct: 456 PEEIGSL----ESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCPL 499



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 127/268 (47%), Gaps = 24/268 (8%)

Query: 14  SDSDSFKTV------SIKTLDFSYSSLD--SETLATQIEL----LPNNDYNKKPENIDTL 61
           +D D  K +       IK LD S SS+     T+   + L    L +N   + P  I  L
Sbjct: 32  ADQDVIKALQRCRDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCL 91

Query: 62  L------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +      L  N+L+  P++    + L+ LDL +N++  +P  I     L+TL  R N +T
Sbjct: 92  VSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRIT 151

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  +  D+  L NL + +L  N++ +    I  +  L  L + +N L H+P +I     L
Sbjct: 152 A--VADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNL 209

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L DIPD+ G+L  L  L +  N+L S+PA++ N K +    +  N +  LP
Sbjct: 210 SALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLP 269

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPT 262
             +  L  LS  L ++ L  N+  + PT
Sbjct: 270 DGM--LASLS-GLTTITLSRNQFASYPT 294



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 157/335 (46%), Gaps = 49/335 (14%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ TL + HN+L   P++     NL +LDL +N +  +P +I N   L  L  R N L+ 
Sbjct: 185 NLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLS- 243

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPI-----------------QILDIPT-------- 150
            S+P  + N K++  FN+ GN + Q P                  Q    PT        
Sbjct: 244 -SVPATLKNCKSMDEFNVEGNGITQLPDGMLASLSGLTTITLSRNQFASYPTGGPAQFTN 302

Query: 151 LKYLYLGNNSLNHVPREINKLCK-LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
           +  + L +N ++ +P  I    K L  L++  N LT +P   G    +  L L+ N L+ 
Sbjct: 303 VYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQK 362

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           LP  I NL+ L+ L+L NN L+ +P  I  L+    KL+ L L  N++  LP EI  L  
Sbjct: 363 LPDDIMNLQNLEILILSNNMLKKIPNTIGNLR----KLRILDLEENRIEVLPHEIGLLHE 418

Query: 270 LSELSLRDNPLVIRFVSDMTYKPPSLLELASRT-LKVHEIDYSQEHLPQNL--VQYLESA 326
           L  L L+ N         +T  P S+  L + T L V E +   + LP+ +  ++ LE+ 
Sbjct: 419 LQRLILQTN--------QITMLPRSIGHLGNLTHLSVSENNL--QFLPEEIGSLESLENL 468

Query: 327 HHCVNPKCKGVFFDNRI-EHIKF--VDFCGKYRIP 358
           +   NP  + + F+  + +++K+  +D C    IP
Sbjct: 469 YINQNPGLEKLPFELALCQNLKYLNIDKCPLSTIP 503



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 70/229 (30%), Positives = 109/229 (47%), Gaps = 13/229 (5%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLL 113
           + E I  L L  ++++  P    +  +L  L L +N+I  LP  I       L++  NL 
Sbjct: 44  RDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEI-----GCLVSLRNLA 98

Query: 114 TAE----SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREIN 169
             E    SLP+ + N   LKV +L  N+L + P  I  + +L  LYL  N +  V  ++ 
Sbjct: 99  LNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLR 158

Query: 170 KLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           +L  L +LSL  N + ++    G L  L  L +S N LE LP  I N   L +L L +N+
Sbjct: 159 QLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNE 218

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           L  +P  I  LK L      L +  N+L ++P  +   K + E ++  N
Sbjct: 219 LLDIPDSIGNLKSLVR----LGMRYNRLSSVPATLKNCKSMDEFNVEGN 263



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 13/165 (7%)

Query: 34  LDSETLATQIEL-LPNNDYNKKP------ENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           LD  T    +EL L  N   K P      +N++ L+L +N L   P+       LR LDL
Sbjct: 342 LDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDL 401

Query: 87  SNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI 145
             NRI  LP  I     L  LI + N +T   LP+ + +L NL   ++S N L+  P +I
Sbjct: 402 EENRIEVLPHEIGLLHELQRLILQTNQITM--LPRSIGHLGNLTHLSVSENNLQFLPEEI 459

Query: 146 LDIPTLKYLYLGNN-SLNHVPREINKLCK-LHVLSLGGNSLTDIP 188
             + +L+ LY+  N  L  +P E+  LC+ L  L++    L+ IP
Sbjct: 460 GSLESLENLYINQNPGLEKLPFEL-ALCQNLKYLNIDKCPLSTIP 503


>gi|327266826|ref|XP_003218205.1| PREDICTED: leucine-rich repeat and IQ domain-containing protein
           4-like [Anolis carolinensis]
          Length = 612

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 90/290 (31%), Positives = 133/290 (45%), Gaps = 58/290 (20%)

Query: 46  LPNNDYNKKPENIDTL------LLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI- 98
           L  N+ N  PE I +L       + +N+L+  PD  SK + L  LDLSNN +  LP+++ 
Sbjct: 236 LEKNELNSIPEEICSLKRLAQFFIAYNSLTAVPDTLSKCSKLSILDLSNNLLHKLPRSLK 295

Query: 99  ---------------TNFPLSTLIARNNLL------TAESLPKDMSNLKNLKVFNLSGNQ 137
                           NFP      R+ ++      T + +   ++ L N+ + +LS N 
Sbjct: 296 ELTEIKEFGLSGNPLANFPRQIRRWRSLIVVYLKNCTLQMVHPSLAKLTNMMILDLSENL 355

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL------------------ 179
           L+ FP +I  +  L+ L L +N +  VP E+++L +L  L L                  
Sbjct: 356 LDTFPREICTMENLEVLALDDNQITEVPPEVHRLSRLKCLGLTSNRFAWFPEEIFHLQSL 415

Query: 180 --------GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
                    G  L D+P+    L  L+ L L  N LE LP SI  L  L+ L  HNN L 
Sbjct: 416 EKLYMGQDKGTKLADLPENISQLQNLKELYLEKNDLEYLPTSIGLLNNLEILDCHNNFLI 475

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            LP  I    C  + L+ LLLH+N+L  LP  + +L+ L  LSL  NPL+
Sbjct: 476 ELPDSI----CRLQGLQKLLLHSNQLFQLPENLDSLEKLQVLSLEGNPLM 521



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/195 (34%), Positives = 100/195 (51%), Gaps = 10/195 (5%)

Query: 76  SKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLS 134
           +K TN+  LDLS N +   P+ I     L  L   +N +T   +P ++  L  LK   L+
Sbjct: 341 AKLTNMMILDLSENLLDTFPREICTMENLEVLALDDNQIT--EVPPEVHRLSRLKCLGLT 398

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNS---LNHVPREINKLCKLHVLSLGGNSLTDIPDTF 191
            N+   FP +I  + +L+ LY+G +    L  +P  I++L  L  L L  N L  +P + 
Sbjct: 399 SNRFAWFPEEIFHLQSLEKLYMGQDKGTKLADLPENISQLQNLKELYLEKNDLEYLPTSI 458

Query: 192 GDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLL 251
           G L  LE L   +N L  LP SI  L+ L+ LLLH+N+L  LP  + +L    EKL+ L 
Sbjct: 459 GLLNNLEILDCHNNFLIELPDSICRLQGLQKLLLHSNQLFQLPENLDSL----EKLQVLS 514

Query: 252 LHNNKLRTLPTEIIT 266
           L  N L   P E+ +
Sbjct: 515 LEGNPLMDPPVEVFS 529



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 114/269 (42%), Gaps = 49/269 (18%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNN-----------RITHLPQA------I 98
           +N+  L L  NN+        +   L++LDLSNN           ++  L Q       +
Sbjct: 112 KNVKVLYLNKNNIGTLCKEFGELKCLQNLDLSNNPLSCDSLNIVSKLRALCQLRLYDVNL 171

Query: 99  TNFPLST----------LIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDI 148
             FP+             ++ NNL     LPK++ N+  L    L  N+ E FP ++  +
Sbjct: 172 DEFPVEICKHLHHLKLLGLSTNNL---TCLPKEVVNMTKLTEIYLKSNKFENFPQELCHL 228

Query: 149 PTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLE 208
             L+ + L  N LN +P EI  L +L    +  NSLT +PDT     +L  L LS+N L 
Sbjct: 229 YNLEIIDLEKNELNSIPEEICSLKRLAQFFIAYNSLTAVPDTLSKCSKLSILDLSNNLLH 288

Query: 209 SLPASISNLKMLKSLLLHNNKLRTLPTEI-------------ITLKCLSEKLKSLL---- 251
            LP S+  L  +K   L  N L   P +I              TL+ +   L  L     
Sbjct: 289 KLPRSLKELTEIKEFGLSGNPLANFPRQIRRWRSLIVVYLKNCTLQMVHPSLAKLTNMMI 348

Query: 252 --LHNNKLRTLPTEIITLKCLSELSLRDN 278
             L  N L T P EI T++ L  L+L DN
Sbjct: 349 LDLSENLLDTFPREICTMENLEVLALDDN 377



 Score = 71.2 bits (173), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 84/184 (45%), Gaps = 21/184 (11%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           EN++ L L  N ++  P    + + L+ L L++NR    P+ I +               
Sbjct: 367 ENLEVLALDDNQITEVPPEVHRLSRLKCLGLTSNRFAWFPEEIFH--------------- 411

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
                 + +L+ L +    G +L   P  I  +  LK LYL  N L ++P  I  L  L 
Sbjct: 412 ------LQSLEKLYMGQDKGTKLADLPENISQLQNLKELYLEKNDLEYLPTSIGLLNNLE 465

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L    N L ++PD+   L  L+ L+L  NQL  LP ++ +L+ L+ L L  N L   P 
Sbjct: 466 ILDCHNNFLIELPDSICRLQGLQKLLLHSNQLFQLPENLDSLEKLQVLSLEGNPLMDPPV 525

Query: 236 EIIT 239
           E+ +
Sbjct: 526 EVFS 529



 Score = 59.7 bits (143), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 67/247 (27%), Positives = 100/247 (40%), Gaps = 55/247 (22%)

Query: 84  LDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
           +DL+N ++T +P  + +   L  L    N++  ES+P+ +  LKN+KV  L+ N +    
Sbjct: 71  VDLANKKLTAIPCQVFDLKDLEELHLERNMI--ESIPESIDQLKNVKVLYLNKNNIGTLC 128

Query: 143 IQILDIPTLKYLYLGNN-----SLNHV--------------------------------- 164
            +  ++  L+ L L NN     SLN V                                 
Sbjct: 129 KEFGELKCLQNLDLSNNPLSCDSLNIVSKLRALCQLRLYDVNLDEFPVEICKHLHHLKLL 188

Query: 165 ----------PREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASI 214
                     P+E+  + KL  + L  N   + P     LY LE + L  N+L S+P  I
Sbjct: 189 GLSTNNLTCLPKEVVNMTKLTEIYLKSNKFENFPQELCHLYNLEIIDLEKNELNSIPEEI 248

Query: 215 SNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELS 274
            +LK L    +  N L  +P  +   KC   KL  L L NN L  LP  +  L  + E  
Sbjct: 249 CSLKRLAQFFIAYNSLTAVPDTLS--KC--SKLSILDLSNNLLHKLPRSLKELTEIKEFG 304

Query: 275 LRDNPLV 281
           L  NPL 
Sbjct: 305 LSGNPLA 311



 Score = 51.6 bits (122), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 59/115 (51%), Gaps = 7/115 (6%)

Query: 164 VPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL 223
           VP +I    ++  + L    LT IP    DL  LE L L  N +ES+P SI  LK +K L
Sbjct: 60  VPVQITD--RIFFVDLANKKLTAIPCQVFDLKDLEELHLERNMIESIPESIDQLKNVKVL 117

Query: 224 LLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIIT-LKCLSELSLRD 277
            L+ N + TL  E   LKC    L++L L NN L      I++ L+ L +L L D
Sbjct: 118 YLNKNNIGTLCKEFGELKC----LQNLDLSNNPLSCDSLNIVSKLRALCQLRLYD 168


>gi|428298451|ref|YP_007136757.1| small GTP-binding protein [Calothrix sp. PCC 6303]
 gi|428234995|gb|AFZ00785.1| small GTP-binding protein [Calothrix sp. PCC 6303]
          Length = 1408

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/239 (31%), Positives = 128/239 (53%), Gaps = 12/239 (5%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L    N++S  P+  +K +NLR L +S+N+IT +P+AI     L  L   +N +T 
Sbjct: 127 NLTQLYFNSNHISKIPELIAKLSNLRELHVSSNKITEIPEAIAKLSNLRELHVSSNQIT- 185

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+ ++NL NL+  ++S NQ+ + P  I  +  L+ L + +N +  +P  I KL  L 
Sbjct: 186 -EIPEAIANLSNLRELHVSSNQITEIPEAIAKLINLRELQVSSNKITEIPEVIAKLTNLR 244

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N +T+IP+    L  L  L LS NQ+  +  +++ L  L  ++LHNNK+  +P 
Sbjct: 245 KLYLRNNQITEIPEVIAKLTNLTQLDLSYNQITKISEALAKLINLTQIILHNNKITEIPD 304

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN-----PLVIRFVSDMT 289
            +  L  L++    L L  N++  +P  +  L  L++L L  N     P VI  ++++T
Sbjct: 305 ALAKLINLTQ----LDLSYNQITKIPEALAKLTNLTQLILYSNQITEIPEVIAKLTNLT 359



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/283 (28%), Positives = 135/283 (47%), Gaps = 41/283 (14%)

Query: 20  KTVSIKTLDFSYSSLDS--ETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASK 77
           K +++  LD SY+ +    E LA             K  N+  L+LY N ++  P+  +K
Sbjct: 308 KLINLTQLDLSYNQITKIPEALA-------------KLTNLTQLILYSNQITEIPEVIAK 354

Query: 78  FTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA--------------------- 115
            TNL  LDLS N+IT +P+A+     L+ LI  +N ++                      
Sbjct: 355 LTNLTQLDLSYNQITKIPEALAKLTNLTQLILYSNRISEIPEALAKLINLTQIILSYNRI 414

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+ ++ L NL   +LS NQ+ + P  +  +  L  + L +N +  +P  + KL  L 
Sbjct: 415 SEIPEALAKLTNLTQLDLSYNQITKIPEALAKLINLTQIILHSNKITEIPEALAKLTNLR 474

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N +T+IP+    L  L  L LSDNQ+  +P +++ L  L  L L+ NK+  +P 
Sbjct: 475 QLYLSYNRITEIPEALAKLTNLTQLNLSDNQIIKIPKALAKLSNLTQLDLNRNKITEIPE 534

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            +  L  L++    L L NN++  +P  +  L  L++L L  N
Sbjct: 535 ALAKLTNLTQ----LYLRNNRITEIPEALAKLTNLTQLDLGTN 573



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 112/222 (50%), Gaps = 4/222 (1%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           N+  L L  N ++  P+  +K TNL  L L NNRIT +P+A+      T +         
Sbjct: 518 NLTQLDLNRNKITEIPEALAKLTNLTQLYLRNNRITEIPEALAKLTNLTQLDLGTNYNIS 577

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            +P+ ++ L NL   NL+ +Q+ + P  I  +  L  L L +N +  +P  I KL  L  
Sbjct: 578 EIPEAITKLTNLTQLNLTSSQITEIPEVIAKLTNLTQLNLTSNQIAEIPEAIAKLTNLTQ 637

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N +T+IP+    L  L  L L+ NQ+  +P +I+ L  L  L+L  N++  +P  
Sbjct: 638 LILTSNQITEIPEAIAKLTNLTQLNLTSNQITKIPEAIAKLTNLTQLILSYNQITEIPEA 697

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           I  L  L++    L+L +N++  +P  I  L  L++L L  N
Sbjct: 698 IAKLTNLTQ----LILTSNQITEIPDAITKLTNLTQLDLSYN 735



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 118/242 (48%), Gaps = 22/242 (9%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L +N ++  P+  +K TNL  LDLS N+IT + +A+     L+ +I  NN +T 
Sbjct: 242 NLRKLYLRNNQITEIPEVIAKLTNLTQLDLSYNQITKISEALAKLINLTQIILHNNKIT- 300

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P  ++ L NL   +LS NQ+ + P  +  +  L  L L +N +  +P  I KL  L 
Sbjct: 301 -EIPDALAKLINLTQLDLSYNQITKIPEALAKLTNLTQLILYSNQITEIPEVIAKLTNLT 359

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N +T IP+    L  L  LIL  N++  +P +++ L  L  ++L  N++  +P 
Sbjct: 360 QLDLSYNQITKIPEALAKLTNLTQLILYSNRISEIPEALAKLINLTQIILSYNRISEIPE 419

Query: 236 EIITLKCLSE-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
            +  L  L++                    L  ++LH+NK+  +P  +  L  L +L L 
Sbjct: 420 ALAKLTNLTQLDLSYNQITKIPEALAKLINLTQIILHSNKITEIPEALAKLTNLRQLYLS 479

Query: 277 DN 278
            N
Sbjct: 480 YN 481



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/216 (31%), Positives = 107/216 (49%), Gaps = 7/216 (3%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTAESLPKDMSN 124
           NNL   P       NLR LD+S N +  +P  +T    L  LI     LT   +P+ ++N
Sbjct: 67  NNLKTLPLELLGLPNLRKLDISGNPLESIPDVVTQILHLEELILIRVELT--EIPEAIAN 124

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L NL     + N + + P  I  +  L+ L++ +N +  +P  I KL  L  L +  N +
Sbjct: 125 LSNLTQLYFNSNHISKIPELIAKLSNLRELHVSSNKITEIPEAIAKLSNLRELHVSSNQI 184

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T+IP+   +L  L  L +S NQ+  +P +I+ L  L+ L + +NK+  +P  I  L    
Sbjct: 185 TEIPEAIANLSNLRELHVSSNQITEIPEAIAKLINLRELQVSSNKITEIPEVIAKLT--- 241

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             L+ L L NN++  +P  I  L  L++L L  N +
Sbjct: 242 -NLRKLYLRNNQITEIPEVIAKLTNLTQLDLSYNQI 276



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/172 (33%), Positives = 92/172 (53%), Gaps = 1/172 (0%)

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLK 126
           N+S  P+  +K TNL  L+L++++IT +P+ I      T +   +   AE +P+ ++ L 
Sbjct: 575 NISEIPEAITKLTNLTQLNLTSSQITEIPEVIAKLTNLTQLNLTSNQIAE-IPEAIAKLT 633

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NL    L+ NQ+ + P  I  +  L  L L +N +  +P  I KL  L  L L  N +T+
Sbjct: 634 NLTQLILTSNQITEIPEAIAKLTNLTQLNLTSNQITKIPEAIAKLTNLTQLILSYNQITE 693

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
           IP+    L  L  LIL+ NQ+  +P +I+ L  L  L L  N++  +P EI+
Sbjct: 694 IPEAIAKLTNLTQLILTSNQITEIPDAITKLTNLTQLDLSYNRISEIPLEIL 745



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 115/253 (45%), Gaps = 49/253 (19%)

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE----------------SLPKDMSN 124
           R LDLS   +T LP  I     L +LI    L   E                +LP ++  
Sbjct: 19  RELDLSGQELTELPGEIGKLQQLESLILGKKLEGYERVGSRILEKVSGNNLKTLPLELLG 78

Query: 125 LKNLKVFNLSGNQLEQFP----------------IQILDIP-------TLKYLYLGNNSL 161
           L NL+  ++SGN LE  P                +++ +IP        L  LY  +N +
Sbjct: 79  LPNLRKLDISGNPLESIPDVVTQILHLEELILIRVELTEIPEAIANLSNLTQLYFNSNHI 138

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
           + +P  I KL  L  L +  N +T+IP+    L  L  L +S NQ+  +P +I+NL  L+
Sbjct: 139 SKIPELIAKLSNLRELHVSSNKITEIPEAIAKLSNLRELHVSSNQITEIPEAIANLSNLR 198

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN--- 278
            L + +N++  +P  I  L  L E    L + +NK+  +P  I  L  L +L LR+N   
Sbjct: 199 ELHVSSNQITEIPEAIAKLINLRE----LQVSSNKITEIPEVIAKLTNLRKLYLRNNQIT 254

Query: 279 --PLVIRFVSDMT 289
             P VI  ++++T
Sbjct: 255 EIPEVIAKLTNLT 267


>gi|260826692|ref|XP_002608299.1| hypothetical protein BRAFLDRAFT_89276 [Branchiostoma floridae]
 gi|229293650|gb|EEN64309.1| hypothetical protein BRAFLDRAFT_89276 [Branchiostoma floridae]
          Length = 2303

 Score =  102 bits (253), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 130/272 (47%), Gaps = 53/272 (19%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITH-------------------- 93
           K E+I +L L  N L+  PD+     NL+ L+LS NRI                      
Sbjct: 55  KMEDIQSLDLRSNYLTSIPDDIENLRNLKVLNLSGNRIVEYSFLSKLRTLVELDLSNQNL 114

Query: 94  --LPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPT 150
             +P+ + N   L  L   NN +T   +PK +  LK L++ ++SGN++  FPI  L   T
Sbjct: 115 RSIPEEVFNIHSLEILRVANNGIT--EIPKSILKLKGLRILDVSGNRISSFPISTLG--T 170

Query: 151 LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQ-------------- 196
           LK LY+    L  +P E+  L +L VL +  N +  +P   G LY+              
Sbjct: 171 LKELYISRVQLQTIPEEVFALEELEVLDISNNKVKYLPVKLGKLYRLRVLKLGGNNVCSF 230

Query: 197 --------LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLK 248
                   LE L LSD +L+S+P     L  LK+L L+NNK+RT+P +I         L+
Sbjct: 231 EVMPALQCLEELDLSDMRLKSIPKEAFYLTNLKTLKLNNNKIRTIPADIER----PMALQ 286

Query: 249 SLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +LLL NNK+ ++   +  +K L  LSL +N L
Sbjct: 287 TLLLDNNKISSVSEVLDKMKFLRHLSLSNNNL 318



 Score = 92.4 bits (228), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 145/288 (50%), Gaps = 19/288 (6%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHL-PQAI 98
             +I +LP      K  +I  L L +N +    D+ ++   +R LDLS NR+  + P  +
Sbjct: 363 GNRIRVLPEEIAGLK--DIRVLKLKNNRIRQVADDVAELCEIRHLDLSENRLNGIHPSIL 420

Query: 99  TNFPLSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
               + +L +++N ++    +P+++S+L+ L+   L G  L +   ++  I  L+ L +G
Sbjct: 421 EMRHMESLDLSKNRVI---KIPREISHLRRLQTLKLRGTDLREVNEELFTIDDLRELDIG 477

Query: 158 NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNL 217
            N    +  +++KL  L  LSL G  L+ +P    +L  LE L +SDN + ++P +I NL
Sbjct: 478 QNPRMFISEKVSKLRCLKTLSLDGCRLSGLPRELFELPNLEVLDISDNDIRTIPTAIENL 537

Query: 218 KMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRD 277
           K LK L  +   L ++P  I+ L C   KL+ L L  N+++ +   I  LK L  L L D
Sbjct: 538 KKLKVLRANRLFLDSVPYSILGL-C---KLRCLFLQGNRIQKISESISMLKELQVLDLSD 593

Query: 278 NPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLES 325
           N   IR +      P  L E+++      E ++  +  P   ++YLE+
Sbjct: 594 NK--IRRI------PAQLGEISTLQSVNVERNWVTDLTPICRLKYLET 633



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 82/272 (30%), Positives = 131/272 (48%), Gaps = 30/272 (11%)

Query: 45   LLPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI 98
            LL  N  ++   NI+TL+      L  NNL   P++ S    L  L+LS NR+ H P   
Sbjct: 843  LLGGNHLDELSRNINTLMYLERLDLSRNNLRDLPESLSFLPCLEILNLSGNRLRHFPPEF 902

Query: 99   TNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
            +   L  L   +N L    +P++++++ +L+  N+S N+++    ++  + +L  L +  
Sbjct: 903  SGLMLEVLDLSDNGL--RFVPREVTDMLSLQTLNISRNRIKVIGDRMCQLDSLVDLDISR 960

Query: 159  NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
            NS+  +P  I  L  +  L+   N+++ I     +L  LE L L  NQLE +P  I +L 
Sbjct: 961  NSVTSIPENICLLANMERLTASHNNISSIIRDVCELPNLEYLDLRHNQLEKVPTDIGSLS 1020

Query: 219  MLKSLLLHNNKL--------------------RTLPTEIITLKCLSEKLKSLLLHNNKLR 258
             L+ LLL  NK+                    R L T I +  C S  L+ L L+ NK+ 
Sbjct: 1021 QLRVLLLSGNKIAYVTTIDLAKAVELVLLDLSRNLLTSIPSSVCQSASLRVLKLNENKIE 1080

Query: 259  TLPTEIITLKCLSELSLRDNPL--VIRFVSDM 288
             +PT I     L+EL LR N +  V R VS++
Sbjct: 1081 GVPTYISRATGLTELQLRGNRIFVVCREVSEL 1112



 Score = 88.2 bits (217), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 117/236 (49%), Gaps = 7/236 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ TL L +N +   P +  +   L++L L NN+I+ + + +     L  L   NN LT 
Sbjct: 261 NLKTLKLNNNKIRTIPADIERPMALQTLLLDNNKISSVSEVLDKMKFLRHLSLSNNNLTD 320

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
              P D  ++ +L+  NL GN+L   P  +     L  L    N +  +P EI  L  + 
Sbjct: 321 SGFPVDDVDIISLEHLNLDGNKLTAIPTCVYQAQKLVCLSAEGNRIRVLPEEIAGLKDIR 380

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           VL L  N +  + D   +L ++  L LS+N+L  +  SI  ++ ++SL L  N++  +P 
Sbjct: 381 VLKLKNNRIRQVADDVAELCEIRHLDLSENRLNGIHPSILEMRHMESLDLSKNRVIKIPR 440

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYK 291
           EI  L+    +L++L L    LR +  E+ T+  L EL +  NP +  F+S+   K
Sbjct: 441 EISHLR----RLQTLKLRGTDLREVNEELFTIDDLRELDIGQNPRM--FISEKVSK 490



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 66/217 (30%), Positives = 112/217 (51%), Gaps = 32/217 (14%)

Query: 84  LDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF- 141
            DLS+  ++HL   +     + +L  R+N LT  S+P D+ NL+NLKV NLSGN++ ++ 
Sbjct: 39  FDLSDRCLSHLSVGVCKMEDIQSLDLRSNYLT--SIPDDIENLRNLKVLNLSGNRIVEYS 96

Query: 142 ---------------------PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
                                P ++ +I +L+ L + NN +  +P+ I KL  L +L + 
Sbjct: 97  FLSKLRTLVELDLSNQNLRSIPEEVFNIHSLEILRVANNGITEIPKSILKLKGLRILDVS 156

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
           GN ++  P     L  L+ L +S  QL+++P  +  L+ L+ L + NNK++ LP ++  L
Sbjct: 157 GNRISSFP--ISTLGTLKELYISRVQLQTIPEEVFALEELEVLDISNNKVKYLPVKLGKL 214

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRD 277
                +L+ L L  N + +    +  L+CL EL L D
Sbjct: 215 Y----RLRVLKLGGNNVCSFEV-MPALQCLEELDLSD 246



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 143/285 (50%), Gaps = 25/285 (8%)

Query: 24  IKTLDFSYSSLDSETLATQIELLPNNDYNKKPE---NIDTLL---LYHNNLSFFPDNASK 77
           I++L  S+SSL+    A  +  L +ND +  P     I+TL    L  N +   P     
Sbjct: 687 IESLPDSFSSLN----ALSVLRLASNDMSSFPTEVCGINTLTDIDLSSNKIPSLPFGVGL 742

Query: 78  FTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAES----LPKDMSNLKNLKVFNL 133
             N+ +L+LS N+   LP  + +F +S + +  +L  +++    +P+ +S L+ L+  N+
Sbjct: 743 LENVEALNLSKNK---LPDDMHDF-ISQMTSLKHLDLSQTGMTKVPETISRLEELEYLNI 798

Query: 134 SGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGD 193
           S N+L+  P ++ ++P L+ L   +N L  +P +  +   +  L LGGN L ++      
Sbjct: 799 SSNKLQYIPSEMFELPFLEELDASDNVLKELPVDAVQESDVERLLLGGNHLDELSRNINT 858

Query: 194 LYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLH 253
           L  LE L LS N L  LP S+S L  L+ L L  N+LR  P E   L      L+ L L 
Sbjct: 859 LMYLERLDLSRNNLRDLPESLSFLPCLEILNLSGNRLRHFPPEFSGL-----MLEVLDLS 913

Query: 254 NNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLEL 298
           +N LR +P E+  +  L  L++  N   I+ + D   +  SL++L
Sbjct: 914 DNGLRFVPREVTDMLSLQTLNISRNR--IKVIGDRMCQLDSLVDL 956



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/204 (29%), Positives = 100/204 (49%), Gaps = 6/204 (2%)

Query: 65   HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSN 124
             NN      N     +L SLD + N I+ L        L  L A NNL+T   +P +++ 
Sbjct: 1259 RNNAIMALPNIGHLRSLTSLDATANSISDLVDLCNASDLRVLKADNNLIT--EVPDEIAK 1316

Query: 125  LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
            L+++++ +LSGN L+     + ++  ++ L   +  L  VP E+ +L  L  + L  N L
Sbjct: 1317 LEHIELLSLSGNWLDDLSPHLSELSKIRRLVFNSCMLTEVPPEVGELRTLRSIELKDNEL 1376

Query: 185  TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
             D PD    L  L  + L  N+L+ +P  +   + LK + L  N + TLP+ +    C  
Sbjct: 1377 ADFPDVLLYLPHLANVALDGNKLDIIPDEVRRFESLKIMSLSRNNIETLPSTL----CHV 1432

Query: 245  EKLKSLLLHNNKLRTLPTEIITLK 268
              L+ L +  NKL TLP +I+ L+
Sbjct: 1433 NNLQWLDVRKNKLTTLPADIVRLE 1456



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/226 (30%), Positives = 113/226 (50%), Gaps = 10/226 (4%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLTA 115
           ++TL +  N L   P N  + + L+ L  S+NR+T LP+       L  L + +NN+   
Sbjct: 631 LETLNIGSNGLYSLPGNLVELSQLKHLRASHNRLTSLPEQFGKLSRLKVLDLTKNNI--- 687

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           ESLP   S+L  L V  L+ N +  FP ++  I TL  + L +N +  +P  +  L  + 
Sbjct: 688 ESLPDSFSSLNALSVLRLASNDMSSFPTEVCGINTLTDIDLSSNKIPSLPFGVGLLENVE 747

Query: 176 VLSLGGNSL-TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            L+L  N L  D+ D    +  L+ L LS   +  +P +IS L+ L+ L + +NKL+ +P
Sbjct: 748 ALNLSKNKLPDDMHDFISQMTSLKHLDLSQTGMTKVPETISRLEELEYLNISSNKLQYIP 807

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +E+  L  L E    L   +N L+ LP + +    +  L L  N L
Sbjct: 808 SEMFELPFLEE----LDASDNVLKELPVDAVQESDVERLLLGGNHL 849



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 59/197 (29%), Positives = 98/197 (49%), Gaps = 6/197 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPK 120
           L L  N +    ++ S    L+ LDLS+N+I  +P  +    +STL + N      +   
Sbjct: 566 LFLQGNRIQKISESISMLKELQVLDLSDNKIRRIPAQLGE--ISTLQSVNVERNWVTDLT 623

Query: 121 DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
            +  LK L+  N+  N L   P  ++++  LK+L   +N L  +P +  KL +L VL L 
Sbjct: 624 PICRLKYLETLNIGSNGLYSLPGNLVELSQLKHLRASHNRLTSLPEQFGKLSRLKVLDLT 683

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
            N++  +PD+F  L  L  L L+ N + S P  +  +  L  + L +NK+ +LP  +   
Sbjct: 684 KNNIESLPDSFSSLNALSVLRLASNDMSSFPTEVCGINTLTDIDLSSNKIPSLPFGV--- 740

Query: 241 KCLSEKLKSLLLHNNKL 257
             L E +++L L  NKL
Sbjct: 741 -GLLENVEALNLSKNKL 756



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 70/239 (29%), Positives = 116/239 (48%), Gaps = 15/239 (6%)

Query: 43   IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT--N 100
            I LLP+      P N+ TL L  N +S    +  +  NL  L+L++NR+           
Sbjct: 1194 INLLPS----AMPPNVVTLDLSCNGISRLGSSLGQMQNLEVLNLADNRVDSCRGVFGPNT 1249

Query: 101  FP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
            FP L  L  RNN + A  LP ++ +L++L   + + N +    + + +   L+ L   NN
Sbjct: 1250 FPSLRVLNVRNNAIMA--LP-NIGHLRSLTSLDATANSISDL-VDLCNASDLRVLKADNN 1305

Query: 160  SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
             +  VP EI KL  + +LSL GN L D+     +L ++  L+ +   L  +P  +  L+ 
Sbjct: 1306 LITEVPDEIAKLEHIELLSLSGNWLDDLSPHLSELSKIRRLVFNSCMLTEVPPEVGELRT 1365

Query: 220  LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+S+ L +N+L   P  ++ L      L ++ L  NKL  +P E+   + L  +SL  N
Sbjct: 1366 LRSIELKDNELADFPDVLLYLP----HLANVALDGNKLDIIPDEVRRFESLKIMSLSRN 1420



 Score = 78.6 bits (192), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 70/236 (29%), Positives = 109/236 (46%), Gaps = 27/236 (11%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTL-IARNNLLTAE--------- 116
           L   P+       L  LD+SNN++ +LP  +   + L  L +  NN+ + E         
Sbjct: 181 LQTIPEEVFALEELEVLDISNNKVKYLPVKLGKLYRLRVLKLGGNNVCSFEVMPALQCLE 240

Query: 117 ----------SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPR 166
                     S+PK+   L NLK   L+ N++   P  I     L+ L L NN ++ V  
Sbjct: 241 ELDLSDMRLKSIPKEAFYLTNLKTLKLNNNKIRTIPADIERPMALQTLLLDNNKISSVSE 300

Query: 167 EINKLCKLHVLSLGGNSLTD--IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLL 224
            ++K+  L  LSL  N+LTD   P    D+  LE L L  N+L ++P  +   + L  L 
Sbjct: 301 VLDKMKFLRHLSLSNNNLTDSGFPVDDVDIISLEHLNLDGNKLTAIPTCVYQAQKLVCLS 360

Query: 225 LHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
              N++R LP EI  LK     ++ L L NN++R +  ++  L  +  L L +N L
Sbjct: 361 AEGNRIRVLPEEIAGLK----DIRVLKLKNNRIRQVADDVAELCEIRHLDLSENRL 412



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 109/213 (51%), Gaps = 14/213 (6%)

Query: 57   NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITH-----LPQAITNFPLSTLIARNN 111
            N++ L L HN L   P +    + LR L LS N+I +     L +A+    L  L    N
Sbjct: 998  NLEYLDLRHNQLEKVPTDIGSLSQLRVLLLSGNKIAYVTTIDLAKAVE---LVLLDLSRN 1054

Query: 112  LLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
            LLT  S+P  +    +L+V  L+ N++E  P  I     L  L L  N +  V RE+++L
Sbjct: 1055 LLT--SIPSSVCQSASLRVLKLNENKIEGVPTYISRATGLTELQLRGNRIFVVCREVSEL 1112

Query: 172  CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
              L  + L  N L+ +P +   +  LEAL +S N++  L + +  +K +++     NK+ 
Sbjct: 1113 HNLRKVDLSYNHLSTLPLSICHMSNLEALDISHNRIYYLSSDVQKMKKIRTFRAVGNKIH 1172

Query: 232  TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
             LP +I+ L    ++L+ ++LH+N +  LP+ +
Sbjct: 1173 QLPEQILKL----DRLEHVVLHDNNINLLPSAM 1201



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 8/224 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           + TL L   +L    +      +LR LD+  N    + + ++    L TL      L+  
Sbjct: 448 LQTLKLRGTDLREVNEELFTIDDLRELDIGQNPRMFISEKVSKLRCLKTLSLDGCRLSG- 506

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            LP+++  L NL+V ++S N +   P  I ++  LK L      L+ VP  I  LCKL  
Sbjct: 507 -LPRELFELPNLEVLDISDNDIRTIPTAIENLKKLKVLRANRLFLDSVPYSILGLCKLRC 565

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L GN +  I ++   L +L+ L LSDN++  +PA +  +  L+S+ +  N +  L   
Sbjct: 566 LFLQGNRIQKISESISMLKELQVLDLSDNKIRRIPAQLGEISTLQSVNVERNWVTDL--- 622

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             T  C  + L++L + +N L +LP  ++ L  L  L    N L
Sbjct: 623 --TPICRLKYLETLNIGSNGLYSLPGNLVELSQLKHLRASHNRL 664



 Score = 71.6 bits (174), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 105/220 (47%), Gaps = 8/220 (3%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKD 121
           L  NN+   PD+ S    L  L L++N ++  P  +     L+ +   +N +   SLP  
Sbjct: 682 LTKNNIESLPDSFSSLNALSVLRLASNDMSSFPTEVCGINTLTDIDLSSNKIP--SLPFG 739

Query: 122 MSNLKNLKVFNLSGNQL-EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLG 180
           +  L+N++  NLS N+L +     I  + +LK+L L    +  VP  I++L +L  L++ 
Sbjct: 740 VGLLENVEALNLSKNKLPDDMHDFISQMTSLKHLDLSQTGMTKVPETISRLEELEYLNIS 799

Query: 181 GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITL 240
            N L  IP    +L  LE L  SDN L+ LP        ++ LLL  N L  L   I TL
Sbjct: 800 SNKLQYIPSEMFELPFLEELDASDNVLKELPVDAVQESDVERLLLGGNHLDELSRNINTL 859

Query: 241 KCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
                 L+ L L  N LR LP  +  L CL  L+L  N L
Sbjct: 860 M----YLERLDLSRNNLRDLPESLSFLPCLEILNLSGNRL 895



 Score = 50.8 bits (120), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 5/131 (3%)

Query: 148 IPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQL 207
           IP+  +  L +  L+H+   + K+  +  L L  N LT IPD   +L  L+ L LS N++
Sbjct: 33  IPSHLHFDLSDRCLSHLSVGVCKMEDIQSLDLRSNYLTSIPDDIENLRNLKVLNLSGNRI 92

Query: 208 ESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITL 267
               + +S L+ L  L L N  LR++P E+  +      L+ L + NN +  +P  I+ L
Sbjct: 93  VEY-SFLSKLRTLVELDLSNQNLRSIPEEVFNI----HSLEILRVANNGITEIPKSILKL 147

Query: 268 KCLSELSLRDN 278
           K L  L +  N
Sbjct: 148 KGLRILDVSGN 158


>gi|426246387|ref|XP_004016976.1| PREDICTED: protein LAP2 [Ovis aries]
          Length = 1371

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 110/221 (49%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETIGSLKNVTTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N+LE+LP+SI  L  +++    +N L+ LP EI  
Sbjct: 284 DENQLMYLPDSIGGLVSIEELDCSINELEALPSSIGQLTNVRTFAADHNYLQQLPPEIGN 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 97.4 bits (241), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 135/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI-ARNNLLTA----------- 115
           L+  P + +   NLR LD+S N I   P+ I N  + T++ A  N ++            
Sbjct: 81  LTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNL 140

Query: 116 ----------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                     E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    + GN LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDISKNNIEMVEEGISGCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNVT----TLKIDENQLMYLPDSIGGLVSIEEL 304



 Score = 74.3 bits (181), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 93/175 (53%), Gaps = 5/175 (2%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLTAESL 118
           L +  NN+    +  S   NL+ L LS+N +  LP+ I +   ++TL I  N L+    L
Sbjct: 235 LDISKNNIEMVEEGISGCENLQDLLLSSNSLQQLPETIGSLKNVTTLKIDENQLMY---L 291

Query: 119 PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           P  +  L +++  + S N+LE  P  I  +  ++     +N L  +P EI     + VL 
Sbjct: 292 PDSIGGLVSIEELDCSINELEALPSSIGQLTNVRTFAADHNYLQQLPPEIGNWKNITVLF 351

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  N L  +P+  GD+ +L+ + LSDN+L++LP S + L+ L ++ L +N+ + L
Sbjct: 352 LHSNKLETLPEEMGDMQKLKVINLSDNRLKNLPFSFTKLQQLTAMWLSDNQSKPL 406


>gi|260812958|ref|XP_002601187.1| hypothetical protein BRAFLDRAFT_75632 [Branchiostoma floridae]
 gi|229286478|gb|EEN57199.1| hypothetical protein BRAFLDRAFT_75632 [Branchiostoma floridae]
          Length = 1577

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 84/263 (31%), Positives = 123/263 (46%), Gaps = 37/263 (14%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI---TNFPLSTLIARN-- 110
           ENI  L LY   ++  P    K T L  L+LS N   HLP  +   TN  +  L+     
Sbjct: 161 ENIKELRLYACFMATVPPAVLKLTQLEKLNLSGNWGIHLPDGLSRLTNIRVLILLGTGMD 220

Query: 111 -------------------NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
                              N L   +LP  + +L N+K  +LS  QL   P ++  +  L
Sbjct: 221 TVPSVAWRLTQLERLYLSLNPLQTSTLPAKVGHLTNIKHLHLSHCQLHTLPPEVGRLTQL 280

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           ++L L +N L  +P E+ +L K+  L L    L  +P   G L QLE L L +N +++LP
Sbjct: 281 EWLDLSSNPLQTLPAEVGQLTKVKHLDLSYCQLHTLPPEVGRLTQLERLDLRNNPIQTLP 340

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLS 271
             +  L  +K L L + +L TLP E+  L     +L+ L L +N L+TLP E+  L  +S
Sbjct: 341 VEVGQLTNIKHLKLSHCQLHTLPPEVGRLT----QLEWLDLSSNPLQTLPAEVGQLTNVS 396

Query: 272 ELSLRDNPLVIRFVSDMTYKPPS 294
            L +  NPL+         KPPS
Sbjct: 397 YLHVSGNPLI---------KPPS 410



 Score = 75.1 bits (183), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 113/272 (41%), Gaps = 53/272 (19%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           N+  L L   NL+  P    K   L +L LSNN    LP  ++     T I   +    +
Sbjct: 70  NLKLLSLAGCNLATVPAAVMKLPQLETLILSNNENITLPDDMSGLVNLTAI-HLDWCNLD 128

Query: 117 SLPKDMSNLKNLKVFNLSGNQ-----------------------LEQFPIQILDIPTLKY 153
           SLP  +  L +L+  +LSGN+                       +   P  +L +  L+ 
Sbjct: 129 SLPPVVLKLSHLRSLDLSGNEQISLPDELCRLENIKELRLYACFMATVPPAVLKLTQLEK 188

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDN-------- 205
           L L  N   H+P  +++L  + VL L G  +  +P     L QLE L LS N        
Sbjct: 189 LNLSGNWGIHLPDGLSRLTNIRVLILLGTGMDTVPSVAWRLTQLERLYLSLNPLQTSTLP 248

Query: 206 -----------------QLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLK 248
                            QL +LP  +  L  L+ L L +N L+TLP E+  L     K+K
Sbjct: 249 AKVGHLTNIKHLHLSHCQLHTLPPEVGRLTQLEWLDLSSNPLQTLPAEVGQLT----KVK 304

Query: 249 SLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            L L   +L TLP E+  L  L  L LR+NP+
Sbjct: 305 HLDLSYCQLHTLPPEVGRLTQLERLDLRNNPI 336



 Score = 72.8 bits (177), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/230 (28%), Positives = 99/230 (43%), Gaps = 33/230 (14%)

Query: 8   SSSSDSSDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNN 67
            +  D+  S +++   ++ L  S + L + TL  ++  L          NI  L L H  
Sbjct: 216 GTGMDTVPSVAWRLTQLERLYLSLNPLQTSTLPAKVGHL---------TNIKHLHLSHCQ 266

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKN 127
           L   P    + T L  LDLS+N            PL TL            P ++  L  
Sbjct: 267 LHTLPPEVGRLTQLEWLDLSSN------------PLQTL------------PAEVGQLTK 302

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           +K  +LS  QL   P ++  +  L+ L L NN +  +P E+ +L  +  L L    L  +
Sbjct: 303 VKHLDLSYCQLHTLPPEVGRLTQLERLDLRNNPIQTLPVEVGQLTNIKHLKLSHCQLHTL 362

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
           P   G L QLE L LS N L++LPA +  L  +  L +  N L   P+E+
Sbjct: 363 PPEVGRLTQLEWLDLSSNPLQTLPAEVGQLTNVSYLHVSGNPLIKPPSEV 412



 Score = 64.3 bits (155), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 56/180 (31%), Positives = 87/180 (48%), Gaps = 11/180 (6%)

Query: 106 LIARNNLLTAE-------SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
           ++ +  LLT E        LP ++  LK+L+  +LS N   +    ++ +  LK L L  
Sbjct: 19  IMGKMTLLTLELRYKNLKQLPDELFELKDLEALDLSRNMNMELSNGLIKLTNLKLLSLAG 78

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
            +L  VP  + KL +L  L L  N    +PD    L  L A+ L    L+SLP  +  L 
Sbjct: 79  CNLATVPAAVMKLPQLETLILSNNENITLPDDMSGLVNLTAIHLDWCNLDSLPPVVLKLS 138

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L+SL L  N+  +LP E+    C  E +K L L+   + T+P  ++ L  L +L+L  N
Sbjct: 139 HLRSLDLSGNEQISLPDEL----CRLENIKELRLYACFMATVPPAVLKLTQLEKLNLSGN 194



 Score = 60.8 bits (146), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 94/195 (48%), Gaps = 14/195 (7%)

Query: 106 LIARNNLLTAESLPK--DMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNH 163
           ++A  +  T +  PK  D+     L    L    L+Q P ++ ++  L+ L L  N    
Sbjct: 1   MMASTSSFTDKVKPKEWDIMGKMTLLTLELRYKNLKQLPDELFELKDLEALDLSRNMNME 60

Query: 164 VPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL 223
           +   + KL  L +LSL G +L  +P     L QLE LILS+N+  +LP  +S L  L ++
Sbjct: 61  LSNGLIKLTNLKLLSLAGCNLATVPAAVMKLPQLETLILSNNENITLPDDMSGLVNLTAI 120

Query: 224 LLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIR 283
            L    L +LP  ++ L      L+SL L  N+  +LP E+  L+ + EL L        
Sbjct: 121 HLDWCNLDSLPPVVLKLS----HLRSLDLSGNEQISLPDELCRLENIKELRL-------- 168

Query: 284 FVSDMTYKPPSLLEL 298
           +   M   PP++L+L
Sbjct: 169 YACFMATVPPAVLKL 183


>gi|417406607|gb|JAA49953.1| Putative protein scribble [Desmodus rotundus]
          Length = 1575

 Score =  101 bits (252), Expect = 5e-19,   Method: Composition-based stats.
 Identities = 72/223 (32%), Positives = 112/223 (50%), Gaps = 10/223 (4%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF- 101
           ++ +P   Y +   +++ LLL  N L   P    +  NLR L LS+N I  LP  + NF 
Sbjct: 24  LQAVPEEIY-RYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 102 PLSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
            L  L ++RN++     +P+ +   K L++ + SGN L + P     + +L +L L + S
Sbjct: 83  QLVELDVSRNDI---PEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVS 139

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P ++  L  L  L L  N L  +P +   L +LE L L  N LE LP ++  L  L
Sbjct: 140 LQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNL 199

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTE 263
           + L L  N+L  LP E+  L+    +L  L +  N+L  LP E
Sbjct: 200 RELWLDRNQLSALPPELGNLR----RLVCLDVSENRLEALPAE 238



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Composition-based stats.
 Identities = 101/354 (28%), Positives = 146/354 (41%), Gaps = 82/354 (23%)

Query: 29  FSYSSLDSETL--ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           + YS    E L  A Q+  LP   +  +  N+  L L  N +   P   + F  L  LD+
Sbjct: 32  YRYSRSLEELLLDANQLRELPKPFF--RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDV 89

Query: 87  SNNRITHLPQAI-----------TNFPLSTL------------IARNNLLTAESLPKDMS 123
           S N I  +P++I           +  PLS L            +A N++ + ++LP D+ 
Sbjct: 90  SRNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDV-SLQALPGDVG 148

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           NL NL    L  N L+  P  +  +  L+ L LG N L  +P  +  L  L  L L  N 
Sbjct: 149 NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQ 208

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPAS-----------------------ISNLKML 220
           L+ +P   G+L +L  L +S+N+LE+LPA                        I  LK L
Sbjct: 209 LSALPPELGNLRRLVCLDVSENRLEALPAELGGLALLTDLLLSQNLLQRLPDGIGQLKQL 268

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSE-------------------KLKSLLLHNNKLRTLP 261
             L +  N+L  +   I   + LSE                   KL +L +  N+L  LP
Sbjct: 269 SILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNRLEVLP 328

Query: 262 TEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHL 315
            EI     LS LSLRDN L I         PP L    + T ++H +D +   L
Sbjct: 329 PEIGGCVALSVLSLRDNRLAIL--------PPEL----AHTTELHVLDVAGNRL 370



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 10/204 (4%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ S+D  +  +  +P+ I  +   L  L+   N L    LPK    L NL+   LS N+
Sbjct: 13  HVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQL--RELPKPFFRLLNLRKLGLSDNE 70

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK-LHVLSLGGNSLTDIPDTFGDLYQ 196
           +++ P ++ +   L  L +  N +  +P  I K CK L +    GN L+ +P+ F  L  
Sbjct: 71  IQRLPPEVANFMQLVELDVSRNDIPEIPESI-KFCKALEIADFSGNPLSRLPEGFTQLRS 129

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
           L  L L+D  L++LP  + NL  L +L L  N L++LP  +  L     KL+ L L  N 
Sbjct: 130 LAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV----KLEQLDLGGND 185

Query: 257 LRTLPTEIITLKCLSELSLRDNPL 280
           L  LP  +  L  L EL L  N L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQL 209



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Composition-based stats.
 Identities = 68/219 (31%), Positives = 100/219 (45%), Gaps = 10/219 (4%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLP-QAITNF 101
           +E+LP  D      N+  L L  N LS  P        L  LD+S NR+  LP +     
Sbjct: 186 LEVLP--DTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEALPAELGGLA 243

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L+ L+   NLL  + LP  +  LK L +  +  N+L +    I D   L  L L  N L
Sbjct: 244 LLTDLLLSQNLL--QRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLL 301

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +P  + KL KL  L++  N L  +P   G    L  L L DN+L  LP  +++   L 
Sbjct: 302 TALPHSLGKLTKLTNLNVDRNRLEVLPPEIGGCVALSVLSLRDNRLAILPPELAHTTELH 361

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L +  N+L++LP  +  L      LK+L L  N+ + +
Sbjct: 362 VLDVAGNRLQSLPFALTHL-----NLKALWLAENQAQPM 395


>gi|345322696|ref|XP_001505628.2| PREDICTED: leucine-rich repeat-containing protein 40
           [Ornithorhynchus anatinus]
          Length = 612

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 83/228 (36%), Positives = 124/228 (54%), Gaps = 9/228 (3%)

Query: 57  NIDTLLLYHNNLSF-FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           N+DT    + NLSF   D   + T+L  L LSNN++  L   +   P L+ L   +N L 
Sbjct: 67  NLDTPEEANQNLSFGAADRWWEQTDLTKLILSNNKLQTLSDDLRLLPALTVLDVHDNQLA 126

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLP  +  L+NL+  N+S N+L+  P +I ++  LK L+L NN L  +P    +L  L
Sbjct: 127 --SLPCAVGELENLQRLNVSHNKLKILPEEIKNLRNLKSLFLQNNELTCIPEGFGQLLNL 184

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L +  N L+ +P +F  L  L  L L+ NQL+SLP  IS +K LK L    N L T+P
Sbjct: 185 EELDISNNHLSSVPASFSTLTNLVRLNLARNQLKSLPTEISGMKRLKQLDCTCNLLETIP 244

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           +E+ ++    E L+ L L  NKLR++P E    + L EL + +N + +
Sbjct: 245 SELASM----ESLELLYLRRNKLRSIP-EFPFCRSLKELHVGENQIEV 287



 Score = 90.9 bits (224), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 78/227 (34%), Positives = 115/227 (50%), Gaps = 9/227 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLT 114
           EN+  L + HN L   P+      NL+SL L NN +T +P+       L  L   NN L+
Sbjct: 136 ENLQRLNVSHNKLKILPEEIKNLRNLKSLFLQNNELTCIPEGFGQLLNLEELDISNNHLS 195

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             S+P   S L NL   NL+ NQL+  P +I  +  LK L    N L  +P E+  +  L
Sbjct: 196 --SVPASFSTLTNLVRLNLARNQLKSLPTEISGMKRLKQLDCTCNLLETIPSELASMESL 253

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS-ISNLKMLKSLLLHNNKLRTL 233
            +L L  N L  IP+ F     L+ L + +NQ+E + A  + +L  +  L L +NKL+++
Sbjct: 254 ELLYLRRNKLRSIPE-FPFCRSLKELHVGENQIEVIGAEHLKHLSSINVLDLRDNKLKSI 312

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P EI  L+     L+ L L NN + +LP  +  L  L  L+L  NP+
Sbjct: 313 PDEITLLQA----LERLDLTNNDISSLPYALGNLPHLKFLALEGNPM 355



 Score = 89.0 bits (219), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 73/240 (30%), Positives = 119/240 (49%), Gaps = 40/240 (16%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           ++++LP    N +  N+ +L L +N L+  P+   +  NL  LD+SNN ++ +P + +  
Sbjct: 147 KLKILPEEIKNLR--NLKSLFLQNNELTCIPEGFGQLLNLEELDISNNHLSSVPASFST- 203

Query: 102 PLSTLI----ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
            L+ L+    ARN L   +SLP ++S +K LK  + + N LE  P ++  + +L+ LYL 
Sbjct: 204 -LTNLVRLNLARNQL---KSLPTEISGMKRLKQLDCTCNLLETIPSELASMESLELLYLR 259

Query: 158 NNSLNHVPR-----------------------EINKLCKLHVLSLGGNSLTDIPDTFGDL 194
            N L  +P                         +  L  ++VL L  N L  IPD    L
Sbjct: 260 RNKLRSIPEFPFCRSLKELHVGENQIEVIGAEHLKHLSSINVLDLRDNKLKSIPDEITLL 319

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT------LKCLSEKLK 248
             LE L L++N + SLP ++ NL  LK L L  N +RT+  +++T      +K L  K+K
Sbjct: 320 QALERLDLTNNDISSLPYALGNLPHLKFLALEGNPMRTIRRDLLTKGTQELMKYLRSKIK 379



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/168 (29%), Positives = 89/168 (52%), Gaps = 4/168 (2%)

Query: 131 FNLSGNQLEQFPIQILDI-PTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
            N S NQL + P +I+++  T+  + L  N L+ +  EI+ L KL  L +  N LT +PD
Sbjct: 440 INFSKNQLNEVPKRIVELKETVSDVNLSFNKLSLISLEISVLQKLTHLDIRNNLLTALPD 499

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
               L +L+ + LS N+ ++ P  +  +  L+++L  NN++ ++  + + +K + +KL +
Sbjct: 500 EMSALKKLQTINLSFNRFKTFPDVLYCIPTLETILFSNNQVGSV--DALRMKKM-DKLAT 556

Query: 250 LLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLE 297
           L L NN L  +P E+     L  L L  NP  I   + +     ++LE
Sbjct: 557 LDLQNNDLLQVPPELGNCMTLRTLLLEGNPFRIPRAAILAKGTAAVLE 604



 Score = 48.5 bits (114), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 80/302 (26%), Positives = 118/302 (39%), Gaps = 59/302 (19%)

Query: 20  KTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFT 79
           K  SI    F  S  +      QIE++   ++ K   +I+ L L  N L   PD  +   
Sbjct: 262 KLRSIPEFPFCRSLKELHVGENQIEVI-GAEHLKHLSSINVLDLRDNKLKSIPDEITLLQ 320

Query: 80  NLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
            L  LDL+NN I+ LP A+ N P                        +LK   L GN + 
Sbjct: 321 ALERLDLTNNDISSLPYALGNLP------------------------HLKFLALEGNPMR 356

Query: 140 QFPIQILDIPTLKYL-YLGNNSLNHVPRE-------------------INKLCKLHVLSL 179
                +L   T + + YL +   +  P +                   ++ +  L +L  
Sbjct: 357 TIRRDLLTKGTQELMKYLRSKIKDDAPPQNETTTTGTAMTLPSESRVNVHAIVTLKILEY 416

Query: 180 GGNSLTDIPDTFGDLY---QLEALILSDNQLESLPASISNLK-MLKSLLLHNNKLRTLPT 235
                T IPD   D      + ++  S NQL  +P  I  LK  +  + L  NKL  +  
Sbjct: 417 SEKQTTAIPDEVFDAVGRNTVTSINFSKNQLNEVPKRIVELKETVSDVNLSFNKLSLISL 476

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVS--DMTYKPP 293
           EI  L    +KL  L + NN L  LP E+  LK L  ++L  N    RF +  D+ Y  P
Sbjct: 477 EISVL----QKLTHLDIRNNLLTALPDEMSALKKLQTINLSFN----RFKTFPDVLYCIP 528

Query: 294 SL 295
           +L
Sbjct: 529 TL 530


>gi|432116060|gb|ELK37190.1| Leucine-rich repeat-containing protein 40 [Myotis davidii]
          Length = 561

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 85/224 (37%), Positives = 124/224 (55%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSF-FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           N+D     + NLSF   +   + T+L  L +SNN++  L   +   P L+ L   +N LT
Sbjct: 18  NVDIPEEANQNLSFSATERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLT 77

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLP  +  L+NL+  N+S N+L+  P +I ++  LK LYL +N L  +P    +L  L
Sbjct: 78  --SLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKGLYLQHNELTSIPEGFEQLFNL 135

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L +  N LT +P +F  L  L  L LS NQL++LPA IS +K LK L  ++N L ++P
Sbjct: 136 EDLDISNNCLTTVPASFSSLSSLVRLNLSSNQLKNLPAEISGMKRLKHLDCNSNLLESIP 195

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           +E+  +    E L+ L L  NKLR LP E  + K L EL L +N
Sbjct: 196 SELAGM----ESLELLYLRRNKLRFLP-EFPSCKLLKELHLGEN 234



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 81/229 (35%), Positives = 121/229 (52%), Gaps = 14/229 (6%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLT 114
           EN+  L + HN L   P+  +   NL+ L L +N +T +P+     F L  L   NN LT
Sbjct: 87  ENLQKLNVSHNKLKILPEEITNLRNLKGLYLQHNELTSIPEGFEQLFNLEDLDISNNCLT 146

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             ++P   S+L +L   NLS NQL+  P +I  +  LK+L   +N L  +P E+  +  L
Sbjct: 147 --TVPASFSSLSSLVRLNLSSNQLKNLPAEISGMKRLKHLDCNSNLLESIPSELAGMESL 204

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLL---LHNNKLR 231
            +L L  N L  +P+ F     L+ L L +NQ+E L A   +LK L S+L   L +NKL+
Sbjct: 205 ELLYLRRNKLRFLPE-FPSCKLLKELHLGENQIEMLGA--EHLKHLNSILVLDLRDNKLK 261

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           ++P EI  L    + L+ L L NN + +LP  +  L  L  L+L  NP+
Sbjct: 262 SVPDEITLL----QSLERLDLSNNDISSLPYSLGKLH-LKFLALEGNPM 305



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 79/238 (33%), Positives = 118/238 (49%), Gaps = 37/238 (15%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           ++++LP    N +  N+  L L HN L+  P+   +  NL  LD+SNN +T +P + ++ 
Sbjct: 98  KLKILPEEITNLR--NLKGLYLQHNELTSIPEGFEQLFNLEDLDISNNCLTTVPASFSS- 154

Query: 102 PLSTLIARNNLLTAE--SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
            LS+L+ R NL + +  +LP ++S +K LK  + + N LE  P ++  + +L+ LYL  N
Sbjct: 155 -LSSLV-RLNLSSNQLKNLPAEISGMKRLKHLDCNSNLLESIPSELAGMESLELLYLRRN 212

Query: 160 SLNHVPR---------------EINKLCKLH--------VLSLGGNSLTDIPDTFGDLYQ 196
            L  +P                +I  L   H        VL L  N L  +PD    L  
Sbjct: 213 KLRFLPEFPSCKLLKELHLGENQIEMLGAEHLKHLNSILVLDLRDNKLKSVPDEITLLQS 272

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII------TLKCLSEKLK 248
           LE L LS+N + SLP S+  L  LK L L  N +RT+  EII       LK L  K+K
Sbjct: 273 LERLDLSNNDISSLPYSLGKLH-LKFLALEGNPMRTIRREIINKGTQEVLKYLRSKIK 329



 Score = 60.1 bits (144), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 100/199 (50%), Gaps = 9/199 (4%)

Query: 74  NASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE--SLPKDMSNLKNL-KV 130
           N      L+ LD S+ + T +P  + +   S ++   N    +   +PK +  LK +   
Sbjct: 353 NVHAIITLKILDYSDKQTTLIPDEVFDAVKSNIVTSINFSKNQLCEIPKRIIELKEMVSD 412

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NL  N+L    +++  +  L +L L NN LN +P E+  L +L  ++L  N    +P+ 
Sbjct: 413 VNLGFNKLSLISLELCMLQKLSFLDLRNNFLNSLPEEMESLIRLQTINLSFNRFKILPEV 472

Query: 191 FGDLYQLEALILSDNQLESL-PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
              +  LE +++S+NQ+ S+ P  +  ++ L +L L NN L  +P E+    C++  L++
Sbjct: 473 LYRISTLETILISNNQVGSVNPEKLKIMENLVTLDLQNNDLLQIPPELGN--CVN--LRT 528

Query: 250 LLLHNNKLRTLPTEIITLK 268
           LLL  N  R +P   I +K
Sbjct: 529 LLLDGNPFR-VPRAAILMK 546



 Score = 45.8 bits (107), Expect = 0.034,   Method: Compositional matrix adjust.
 Identities = 76/302 (25%), Positives = 127/302 (42%), Gaps = 55/302 (18%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           QIE+L   ++ K   +I  L L  N L   PD  +   +L  LDLSNN I+ LP ++   
Sbjct: 235 QIEML-GAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGKL 293

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYL-YLGNNS 160
                                    +LK   L GN +     +I++  T + L YL +  
Sbjct: 294 -------------------------HLKFLALEGNPMRTIRREIINKGTQEVLKYLRSKI 328

Query: 161 LNHVPRE------------------INKLCKLHVLSLGGNSLTDIPDTFGDLYQ---LEA 199
            +  PR+                  ++ +  L +L       T IPD   D  +   + +
Sbjct: 329 KDDGPRQSDSVIETAMTLPSESRVNVHAIITLKILDYSDKQTTLIPDEVFDAVKSNIVTS 388

Query: 200 LILSDNQLESLPASISNLK-MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
           +  S NQL  +P  I  LK M+  + L  NKL  +  E+    C+ +KL  L L NN L 
Sbjct: 389 INFSKNQLCEIPKRIIELKEMVSDVNLGFNKLSLISLEL----CMLQKLSFLDLRNNFLN 444

Query: 259 TLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQN 318
           +LP E+ +L  L  ++L  N    + + ++ Y+  +L  +     +V  ++  +  + +N
Sbjct: 445 SLPEEMESLIRLQTINLSFNRF--KILPEVLYRISTLETILISNNQVGSVNPEKLKIMEN 502

Query: 319 LV 320
           LV
Sbjct: 503 LV 504


>gi|195570161|ref|XP_002103077.1| GD20236 [Drosophila simulans]
 gi|194199004|gb|EDX12580.1| GD20236 [Drosophila simulans]
          Length = 724

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 123/228 (53%), Gaps = 10/228 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNA-SKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
            + T+ L  N  + +P    ++FTN+ S++L +NRI  +P  I +    L+ L  + N+L
Sbjct: 436 GLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENML 495

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA  LP D+    N+   NL+ N L++ P  I+++  L+ L L NN L  +P  I  L +
Sbjct: 496 TA--LPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRR 553

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N +  +P   G L++L+ LIL  NQ+  LP SI +L  L  L +  N L+ L
Sbjct: 554 LRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFL 613

Query: 234 PTEIITLKCLSEKLKSLLLHNN-KLRTLPTEIITLKCLSELSLRDNPL 280
           P EI +L    E L++L ++ N  L  LP E+   + L  L++   PL
Sbjct: 614 PEEIGSL----ESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCPL 657



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 127/265 (47%), Gaps = 21/265 (7%)

Query: 14  SDSDSFKTVS---IKTLDFSYSSLD--SETLATQIEL----LPNNDYNKKPENIDTLL-- 62
           +D D  K +    IK LD S SS+     T+   + L    L +N   + P  I  L+  
Sbjct: 193 ADQDVIKALQRCRIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSL 252

Query: 63  ----LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAES 117
               L  N+L+  P++    + L+ LDL +N++  +P  I     L+TL  R N +TA  
Sbjct: 253 RNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITA-- 310

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           +  D+  L NL + +L  N++ +    I  +  L  L + +N L H+P +I     L  L
Sbjct: 311 VADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSAL 370

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            L  N L DIPD+ G+L  L  L +  N+L S+PA++ N K +    +  N +  LP  +
Sbjct: 371 DLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGM 430

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPT 262
             L  LS  L ++ L  N+  + PT
Sbjct: 431 --LASLS-GLTTITLSRNQFASYPT 452



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/225 (31%), Positives = 107/225 (47%), Gaps = 7/225 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAE 116
           I  L L  ++++  P    +  +L  L L +N+I  LP  I     L  L    N LT  
Sbjct: 206 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLT-- 263

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           SLP+ + N   LKV +L  N+L + P  I  + +L  LYL  N +  V  ++ +L  L +
Sbjct: 264 SLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTM 323

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           LSL  N + ++    G L  L  L +S N LE LP  I N   L +L L +N+L  +P  
Sbjct: 324 LSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDS 383

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           I  LK L      L +  N+L ++P  +   K + E ++  N + 
Sbjct: 384 IGNLKSLVR----LGMRYNRLSSVPATLKNCKSMDEFNVEGNGIT 424



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 72/142 (50%), Gaps = 4/142 (2%)

Query: 137 QLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQ 196
           Q +Q  I+ L    +K L L  +S+  +P  + +   L  L L  N +  +P   G L  
Sbjct: 192 QADQDVIKALQRCRIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVS 251

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
           L  L L++N L SLP S+ N   LK L L +NKL  +P  I  L+ L+    +L L  N+
Sbjct: 252 LRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLT----TLYLRFNR 307

Query: 257 LRTLPTEIITLKCLSELSLRDN 278
           +  +  ++  L  L+ LSLR+N
Sbjct: 308 ITAVADDLRQLVNLTMLSLREN 329



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 13/165 (7%)

Query: 34  LDSETLATQIEL-LPNNDYNKKP------ENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           LD  T    +EL L  N   K P      +N++ L+L +N L   P+       LR LDL
Sbjct: 500 LDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDL 559

Query: 87  SNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI 145
             NRI  LP  I     L  LI + N +T   LP+ + +L NL   ++S N L+  P +I
Sbjct: 560 EENRIEVLPHEIGLLHELQRLILQTNQITM--LPRSIGHLGNLTHLSVSENNLQFLPEEI 617

Query: 146 LDIPTLKYLYLGNN-SLNHVPREINKLCK-LHVLSLGGNSLTDIP 188
             + +L+ LY+  N  L  +P E+  LC+ L  L++    L+ IP
Sbjct: 618 GSLESLENLYINQNPGLEKLPFEL-ALCQNLKYLNIDKCPLSTIP 661


>gi|359319033|ref|XP_003638977.1| PREDICTED: protein LAP2-like isoform 2 [Canis lupus familiaris]
          Length = 1302

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  +++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 133/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    + GN LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNVT----TLKIDENQLMYLPDSIGGLVSIEEL 304


>gi|403257262|ref|XP_003921246.1| PREDICTED: leucine-rich repeat and death domain-containing protein
           1 [Saimiri boliviensis boliviensis]
          Length = 860

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/225 (33%), Positives = 121/225 (53%), Gaps = 10/225 (4%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L  N L  F ++     NL+ LDL  N+I  +P +I+N   L  LI   N    E+ P
Sbjct: 515 LELNENKLLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCN--KFETFP 572

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
           +++  L+NL+V +LS NQL++    I ++  ++ L   +N   H P E+ +L  L  L++
Sbjct: 573 RELCTLENLRVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNI 632

Query: 180 G---GNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
               G  LT +P    ++ QL+ L +S+N +  +P +I  L+ L SL  HNN++  LP  
Sbjct: 633 SQIKGRKLTILPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAHNNQISYLPPS 692

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +++L      L+ L L  N L  LP++I  L  L E++  DNPL+
Sbjct: 693 LLSLN----DLQQLNLSGNNLTALPSDIYNLFSLKEINFDDNPLL 733



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/272 (32%), Positives = 139/272 (51%), Gaps = 28/272 (10%)

Query: 16  SDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNA 75
           +DS   + +++L    + L S  L ++I+LL          N+  L + HN++S  P   
Sbjct: 182 ADSGDLLGLESLSLQENGLSS--LPSEIQLL---------HNLRILNVSHNHISHIPKEM 230

Query: 76  SKFTNLRSLDLSNNRITHLP---QAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFN 132
            +  N+R L L+NN I + P   + + N  + +L  +N L     LP  + +LKNL++ N
Sbjct: 231 LQLGNIRQLFLNNNYIENFPSDLECLGNLEILSL-GKNKL---RHLPDTLPSLKNLRILN 286

Query: 133 LSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFG 192
           L  NQL  FP  +  +P L  L L  N ++ +P+EI +L  L  L L  N LT +     
Sbjct: 287 LEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIRELKHLETLLLDHNKLTFLAVEIF 346

Query: 193 DLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI---ITLKCLSEKLKS 249
            L +++ L L+DN+LE +   I N + L+ L+L  N L+ +P +I     L+CLS     
Sbjct: 347 QLLKIKELQLADNKLEVISHKIENFRELRILILDKNILKNIPEKISYCAMLECLS----- 401

Query: 250 LLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             L +NKL  LP  I  LK L +L +  N +V
Sbjct: 402 --LSDNKLTELPKNIHKLKNLRKLHVNRNNMV 431



 Score = 95.5 bits (236), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/225 (35%), Positives = 115/225 (51%), Gaps = 8/225 (3%)

Query: 60  TLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN--FPLSTLIARNNLLTAES 117
           T+ L    L  FP +  K   ++ L L  N+I     A +     L +L  + N L+  S
Sbjct: 145 TVNLEAKGLQEFPKDILKIKYVKYLYLDKNQIRTFQGADSGDLLGLESLSLQENGLS--S 202

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           LP ++  L NL++ N+S N +   P ++L +  ++ L+L NN + + P ++  L  L +L
Sbjct: 203 LPSEIQLLHNLRILNVSHNHISHIPKEMLQLGNIRQLFLNNNYIENFPSDLECLGNLEIL 262

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
           SLG N L  +PDT   L  L  L L  NQL   P ++  L  L SL L  N + +LP EI
Sbjct: 263 SLGKNKLRHLPDTLPSLKNLRILNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEI 322

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
             LK     L++LLL +NKL  L  EI  L  + EL L DN L +
Sbjct: 323 RELK----HLETLLLDHNKLTFLAVEIFQLLKIKELQLADNKLEV 363



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 138/278 (49%), Gaps = 23/278 (8%)

Query: 19  FKTVSIKTLDFSYSSLDSETLATQIE--------LLPNNDYNKKPENI------DTLLLY 64
           F+ + IK L  + + L  E ++ +IE        +L  N     PE I      + L L 
Sbjct: 346 FQLLKIKELQLADNKL--EVISHKIENFRELRILILDKNILKNIPEKISYCAMLECLSLS 403

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
            N L+  P N  K  NLR L ++ N +  +   I++   + ++    N++T  S+P ++ 
Sbjct: 404 DNKLTELPKNIHKLKNLRKLHVNRNNMVKINDNISHLNNICSIEFSGNIIT--SVPIEIK 461

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           N + +    L+ N++  FP+ +  + +L YL +  N ++ +P +I+   +L  L L  N 
Sbjct: 462 NCQKITKVELNYNKIMYFPVGLCALDSLYYLSVNGNYISEIPVDISFSKQLLHLELNENK 521

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           L    + F  L  L+ L L  NQ++ +PASISN+  L  L+L  NK  T P E+ TL   
Sbjct: 522 LLIFSEHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFPRELCTL--- 578

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            E L+ L L  N+L+ + ++I  LK + +L+   N  +
Sbjct: 579 -ENLRVLDLSENQLQKISSDICNLKGIQKLNFSSNQFI 615



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 87/291 (29%), Positives = 130/291 (44%), Gaps = 42/291 (14%)

Query: 46  LPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN----- 100
           LP N +  K +N+  L +  NN+    DN S   N+ S++ S N IT +P  I N     
Sbjct: 410 LPKNIH--KLKNLRKLHVNRNNMVKINDNISHLNNICSIEFSGNIITSVPIEIKNCQKIT 467

Query: 101 -----------FPLSTLIARNNLLT-------AESLPKDMSNLKNLKVFNLSGNQLEQFP 142
                      FP+  L A ++L            +P D+S  K L    L+ N+L  F 
Sbjct: 468 KVELNYNKIMYFPVG-LCALDSLYYLSVNGNYISEIPVDISFSKQLLHLELNENKLLIFS 526

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALIL 202
                +  LKYL LG N +  +P  I+ +  LHVL L  N     P     L  L  L L
Sbjct: 527 EHFCSLINLKYLDLGKNQIKKIPASISNMISLHVLILCCNKFETFPRELCTLENLRVLDL 586

Query: 203 SDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT 262
           S+NQL+ + + I NLK ++ L   +N+    P E+  L+ L E+L    +   KL  LP 
Sbjct: 587 SENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSL-EQLNISQIKGRKLTILPG 645

Query: 263 EIITLKCLSELSLRDNPL--VIRFVSDM-------------TYKPPSLLEL 298
           E+  +  L EL + +N +  + R + ++             +Y PPSLL L
Sbjct: 646 ELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAHNNQISYLPPSLLSL 696



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 68/224 (30%), Positives = 109/224 (48%), Gaps = 7/224 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+  L L +N L+ FP        L SLDL+ N I+ LP+ I     L TL+  +N LT
Sbjct: 280 KNLRILNLEYNQLTIFPKALCFLPKLISLDLTGNLISSLPKEIRELKHLETLLLDHNKLT 339

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              L  ++  L  +K   L+ N+LE    +I +   L+ L L  N L ++P +I+    L
Sbjct: 340 F--LAVEIFQLLKIKELQLADNKLEVISHKIENFRELRILILDKNILKNIPEKISYCAML 397

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             LSL  N LT++P     L  L  L ++ N +  +  +IS+L  + S+    N + ++P
Sbjct: 398 ECLSLSDNKLTELPKNIHKLKNLRKLHVNRNNMVKINDNISHLNNICSIEFSGNIITSVP 457

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI       +K+  + L+ NK+   P  +  L  L  LS+  N
Sbjct: 458 IEIKN----CQKITKVELNYNKIMYFPVGLCALDSLYYLSVNGN 497



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 97/209 (46%), Gaps = 14/209 (6%)

Query: 46  LPNNDYNKKPENIDTLLLYH------NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L  N   K P +I  ++  H      N    FP       NLR LDLS N++  +   I 
Sbjct: 540 LGKNQIKKIPASISNMISLHVLILCCNKFETFPRELCTLENLRVLDLSENQLQKISSDIC 599

Query: 100 NFPLSTLIARNNLLTAE--SLPKDMSNLKNLKVFNLS---GNQLEQFPIQILDIPTLKYL 154
           N      I + N  + +    P ++  L++L+  N+S   G +L   P ++ ++  LK L
Sbjct: 600 NL---KGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGRKLTILPGELSNMTQLKEL 656

Query: 155 YLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASI 214
            + NN++  +PR I +L  L  L    N ++ +P +   L  L+ L LS N L +LP+ I
Sbjct: 657 DISNNAIREIPRNIGELRNLVSLHAHNNQISYLPPSLLSLNDLQQLNLSGNNLTALPSDI 716

Query: 215 SNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
            NL  LK +   +N L   P EI   K L
Sbjct: 717 YNLFSLKEINFDDNPLLRPPMEICKGKQL 745



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 10/174 (5%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLP------QAITNFPLSTLIAR 109
           EN+  L L  N L     +      ++ L+ S+N+  H P      Q++    +S +  R
Sbjct: 579 ENLRVLDLSENQLQKISSDICNLKGIQKLNFSSNQFIHFPIELCQLQSLEQLNISQIKGR 638

Query: 110 NNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREIN 169
              LT   LP ++SN+  LK  ++S N + + P  I ++  L  L+  NN ++++P  + 
Sbjct: 639 K--LTI--LPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAHNNQISYLPPSLL 694

Query: 170 KLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSL 223
            L  L  L+L GN+LT +P    +L+ L+ +   DN L   P  I   K L ++
Sbjct: 695 SLNDLQQLNLSGNNLTALPSDIYNLFSLKEINFDDNPLLRPPMEICKGKQLYTI 748



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 60/112 (53%), Gaps = 3/112 (2%)

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLK 126
           L+  P   S  T L+ LD+SNN I  +P+ I     L +L A NN ++   LP  + +L 
Sbjct: 640 LTILPGELSNMTQLKELDISNNAIREIPRNIGELRNLVSLHAHNNQISY--LPPSLLSLN 697

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLS 178
           +L+  NLSGN L   P  I ++ +LK +   +N L   P EI K  +L+ ++
Sbjct: 698 DLQQLNLSGNNLTALPSDIYNLFSLKEINFDDNPLLRPPMEICKGKQLYTIA 749


>gi|261277896|sp|B4QVR7.2|SUR8_DROSI RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
          Length = 680

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 123/228 (53%), Gaps = 10/228 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNA-SKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
            + T+ L  N  + +P    ++FTN+ S++L +NRI  +P  I +    L+ L  + N+L
Sbjct: 392 GLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENML 451

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA  LP D+    N+   NL+ N L++ P  I+++  L+ L L NN L  +P  I  L +
Sbjct: 452 TA--LPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRR 509

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N +  +P   G L++L+ LIL  NQ+  LP SI +L  L  L +  N L+ L
Sbjct: 510 LRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFL 569

Query: 234 PTEIITLKCLSEKLKSLLLHNN-KLRTLPTEIITLKCLSELSLRDNPL 280
           P EI +L    E L++L ++ N  L  LP E+   + L  L++   PL
Sbjct: 570 PEEIGSL----ESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCPL 613



 Score = 84.3 bits (207), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 80/265 (30%), Positives = 127/265 (47%), Gaps = 21/265 (7%)

Query: 14  SDSDSFKTVS---IKTLDFSYSSLD--SETLATQIEL----LPNNDYNKKPENIDTLL-- 62
           +D D  K +    IK LD S SS+     T+   + L    L +N   + P  I  L+  
Sbjct: 149 ADQDVIKALQRCRIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSL 208

Query: 63  ----LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAES 117
               L  N+L+  P++    + L+ LDL +N++  +P  I     L+TL  R N +TA  
Sbjct: 209 RNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITA-- 266

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVL 177
           +  D+  L NL + +L  N++ +    I  +  L  L + +N L H+P +I     L  L
Sbjct: 267 VADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSAL 326

Query: 178 SLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI 237
            L  N L DIPD+ G+L  L  L +  N+L S+PA++ N K +    +  N +  LP  +
Sbjct: 327 DLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLPDGM 386

Query: 238 ITLKCLSEKLKSLLLHNNKLRTLPT 262
             L  LS  L ++ L  N+  + PT
Sbjct: 387 --LASLS-GLTTITLSRNQFASYPT 408



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 70/222 (31%), Positives = 106/222 (47%), Gaps = 7/222 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAE 116
           I  L L  ++++  P    +  +L  L L +N+I  LP  I     L  L    N LT  
Sbjct: 162 IKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENSLT-- 219

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           SLP+ + N   LKV +L  N+L + P  I  + +L  LYL  N +  V  ++ +L  L +
Sbjct: 220 SLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTM 279

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           LSL  N + ++    G L  L  L +S N LE LP  I N   L +L L +N+L  +P  
Sbjct: 280 LSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDS 339

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           I  LK L      L +  N+L ++P  +   K + E ++  N
Sbjct: 340 IGNLKSLVR----LGMRYNRLSSVPATLKNCKSMDEFNVEGN 377



 Score = 57.4 bits (137), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/142 (33%), Positives = 72/142 (50%), Gaps = 4/142 (2%)

Query: 137 QLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQ 196
           Q +Q  I+ L    +K L L  +S+  +P  + +   L  L L  N +  +P   G L  
Sbjct: 148 QADQDVIKALQRCRIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVS 207

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
           L  L L++N L SLP S+ N   LK L L +NKL  +P  I  L+ L+    +L L  N+
Sbjct: 208 LRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLT----TLYLRFNR 263

Query: 257 LRTLPTEIITLKCLSELSLRDN 278
           +  +  ++  L  L+ LSLR+N
Sbjct: 264 ITAVADDLRQLVNLTMLSLREN 285



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 13/165 (7%)

Query: 34  LDSETLATQIEL-LPNNDYNKKP------ENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           LD  T    +EL L  N   K P      +N++ L+L +N L   P+       LR LDL
Sbjct: 456 LDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDL 515

Query: 87  SNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI 145
             NRI  LP  I     L  LI + N +T   LP+ + +L NL   ++S N L+  P +I
Sbjct: 516 EENRIEVLPHEIGLLHELQRLILQTNQITM--LPRSIGHLGNLTHLSVSENNLQFLPEEI 573

Query: 146 LDIPTLKYLYLGNN-SLNHVPREINKLCK-LHVLSLGGNSLTDIP 188
             + +L+ LY+  N  L  +P E+  LC+ L  L++    L+ IP
Sbjct: 574 GSLESLENLYINQNPGLEKLPFEL-ALCQNLKYLNIDKCPLSTIP 617


>gi|72004380|ref|XP_784595.1| PREDICTED: leucine-rich repeat-containing protein 69-like isoform 2
           [Strongylocentrotus purpuratus]
          Length = 362

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 161/354 (45%), Gaps = 44/354 (12%)

Query: 59  DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAES 117
            TL L   NLS  P    K   L +L L NN+I  LP+  T+   L TL   NN +  E 
Sbjct: 15  QTLNLSSKNLSNVPKAVGKLYRLHNLQLKNNKIVKLPKEFTSLTTLVTLNLGNNCI--EE 72

Query: 118 LPKDMSNLKNLKVFNLSGNQLEQFPIQILD-IPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           +P ++S+L +L+V ++  N+++    +IL  +  LK L L NN +  +P  +NKL  L  
Sbjct: 73  IPDELSSLHSLEVLHIFNNKIQNVESKILGCLRHLKILNLNNNQIKSLPISMNKLINLEF 132

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           LS+ GN LT +P     L  +  +  ++NQL SLP  +  L  LK   +  N+++ LP  
Sbjct: 133 LSVDGNQLTTLPGEICALSHMVEIHAANNQLTSLPMELGFLVKLKKFHVQQNRIKELPEG 192

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV--IRFVSDMTYKPPS 294
           +  L+     L+ + +  N+LR  PTE+  L  L EL   +NPL+  I   S    +  +
Sbjct: 193 MGKLR----NLEVIDVAANELRIFPTELHKLP-LKELYCEENPLLDKIPVQSVQEDEVLT 247

Query: 295 LLELAS-----------RTLKVHEIDYSQE------------HLPQNLVQYLESAHHCVN 331
           L EL +           R +KV    + +E            H P N+   L  A  C  
Sbjct: 248 LKELTARYVMKQLKDRRRLVKVGGQLFYEENPAWSYLRRAIRHYP-NVRDMLAQASKCA- 305

Query: 332 PKCKGVFFDNRIEHIKFVDFCGKY-------RIPLLQYLCSSRCITNSPNVMYG 378
             C   F +  +E + FVD            +IP+   LCS +C     +  YG
Sbjct: 306 -LCGESFLNTWLECVCFVDGHKDLKLGNSPGKIPIRALLCSYKCFNQPGHGFYG 358


>gi|449278701|gb|EMC86492.1| Protein LAP2 [Columba livia]
          Length = 1413

 Score =  101 bits (252), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 75/221 (33%), Positives = 110/221 (49%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   S+ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKILPKTMSRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTL--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             +  LK L   ++S N +E     I    +L+ L L +NSL  +P  I  L K+  L +
Sbjct: 224 GFIGTLKQLTYLDVSKNNIEVVEEGISGCESLQDLLLSSNSLQQLPETIGSLKKVTTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  LE L  S N++E+LP+SI  L  +++    +N L  LP+EI  
Sbjct: 284 DENQLIYLPDSVGGLISLEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPSEIGN 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL  LP E+  ++ L  ++L DN L
Sbjct: 344 WKHVT----VLFLHSNKLEFLPEEMGDMQKLKVINLSDNRL 380



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 133/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKILPKTMSRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    + GN LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNIEVVEEGISGCESLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK    K+ +L +  N+L  LP  +  L  L EL
Sbjct: 261 SSNSLQQLPETIGSLK----KVTTLKIDENQLIYLPDSVGGLISLEEL 304



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 117/238 (49%), Gaps = 8/238 (3%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTN-LRSLDLSNNRITHLPQAITNF 101
           + L+P      + E + TL   H +L   P     F   L  L L  N+I  LP+ + N 
Sbjct: 9   VRLVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC 68

Query: 102 -PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
             L  L   +N LT  +LP  ++NL NL+  ++S N +++FP  I +   L  +    N 
Sbjct: 69  QSLHKLSLPDNDLT--TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNP 126

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           ++ +P   ++L  L  L L    L  +P  FG L +L+ L L +NQL+ LP ++S L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKILPKTMSRLTQL 186

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           + L L +N+   +P     L+ LS  LK   +  N+L  +P  I TLK L+ L +  N
Sbjct: 187 ERLDLGSNEFTEVPE---VLEQLS-GLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSKN 240



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 50/156 (32%), Positives = 81/156 (51%), Gaps = 3/156 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           E++  LLL  N+L   P+       + +L +  N++ +LP ++     L  L    N + 
Sbjct: 253 ESLQDLLLSSNSLQQLPETIGSLKKVTTLKIDENQLIYLPDSVGGLISLEELDCSFNEI- 311

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            E+LP  +  L N++ F    N L Q P +I +   +  L+L +N L  +P E+  + KL
Sbjct: 312 -ETLPSSIGQLSNIRTFAADHNFLTQLPSEIGNWKHVTVLFLHSNKLEFLPEEMGDMQKL 370

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
            V++L  N L ++P TF  L QL A+ LSDNQ + L
Sbjct: 371 KVINLSDNRLKNLPFTFTKLQQLTAMWLSDNQSKPL 406



 Score = 70.1 bits (170), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 91/170 (53%), Gaps = 5/170 (2%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLTAESLPKDMS 123
           NN+    +  S   +L+ L LS+N +  LP+ I +   ++TL I  N L+    LP  + 
Sbjct: 240 NNIEVVEEGISGCESLQDLLLSSNSLQQLPETIGSLKKVTTLKIDENQLIY---LPDSVG 296

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            L +L+  + S N++E  P  I  +  ++     +N L  +P EI     + VL L  N 
Sbjct: 297 GLISLEELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPSEIGNWKHVTVLFLHSNK 356

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  +P+  GD+ +L+ + LSDN+L++LP + + L+ L ++ L +N+ + L
Sbjct: 357 LEFLPEEMGDMQKLKVINLSDNRLKNLPFTFTKLQQLTAMWLSDNQSKPL 406



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 109/229 (47%), Gaps = 15/229 (6%)

Query: 41  TQIELL--PNNDYNKKPENIDTL------LLYHNNLSFFPDNASKFTNLRSLDLSNNRIT 92
           TQ+E L   +N++ + PE ++ L       +  N L+  P        L  LD+S N I 
Sbjct: 184 TQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNIE 243

Query: 93  HLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
            + + I+    L  L+  +N L  + LP+ + +LK +    +  NQL   P  +  + +L
Sbjct: 244 VVEEGISGCESLQDLLLSSNSL--QQLPETIGSLKKVTTLKIDENQLIYLPDSVGGLISL 301

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           + L    N +  +P  I +L  +   +   N LT +P   G+   +  L L  N+LE LP
Sbjct: 302 EELDCSFNEIETLPSSIGQLSNIRTFAADHNFLTQLPSEIGNWKHVTVLFLHSNKLEFLP 361

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
             + +++ LK + L +N+L+ LP     L    ++L ++ L +N+ + L
Sbjct: 362 EEMGDMQKLKVINLSDNRLKNLPFTFTKL----QQLTAMWLSDNQSKPL 406


>gi|66799847|ref|XP_628849.1| leucine-rich repeat-containing protein [Dictyostelium discoideum
           AX4]
 gi|122056492|sp|Q54AX5.1|LRRA_DICDI RecName: Full=Leucine-rich repeat protein lrrA
 gi|7673365|gb|AAF66828.1| leucine-rich-repeat protein lrrA [Dictyostelium discoideum]
 gi|60462184|gb|EAL60413.1| leucine-rich repeat-containing protein [Dictyostelium discoideum
           AX4]
          Length = 510

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 117/239 (48%), Gaps = 20/239 (8%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           LLL  N+L   P+   K + +  +D + NRI ++P  I +   L  L   NN L    + 
Sbjct: 42  LLLSENDLITIPEEIGKLSKVEIIDFAKNRINYIPPEIGSLATLKQLFLSNNKLFYTPIT 101

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            ++  LKNL   +LS NQL+  P++I +   L+YL + +N L   P E  KL  L V + 
Sbjct: 102 PNIGALKNLTRLDLSSNQLDDLPVEISNCEALEYLDISDNQLQSFPLEFGKLYNLQVFNC 161

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             NSL  +P       +LE L +S+NQL  LP  I  L +L +L +  NKL+ LP E+ +
Sbjct: 162 SKNSLKSLPSEISGWVKLEELNVSNNQLAFLPNQICLLGLLSTLNVGFNKLQQLPEELSS 221

Query: 240 LKCLS-------------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           +  L+                    +LK L + N ++  LP  +  L  L EL +RDNP
Sbjct: 222 MVSLTNLDLKVNPPLQYVPQLSNLRQLKILSIRNLQITHLPLGLGLLSELIELDIRDNP 280



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 73/224 (32%), Positives = 108/224 (48%), Gaps = 16/224 (7%)

Query: 14  SDSDSFKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPD 73
           S+    K +SI+ L  ++  L    L+  IEL    D    P+           L   P 
Sbjct: 243 SNLRQLKILSIRNLQITHLPLGLGLLSELIEL----DIRDNPQ-----------LKEIPY 287

Query: 74  NASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFN 132
           + +   NL+ LDL  N +  +P+ + N   L TL  R N LT +++P ++  L NLK   
Sbjct: 288 DIATLINLQKLDLFGNNMRIVPREVGNLINLQTLDLRQNKLTIDNIPSEIGKLVNLKKLL 347

Query: 133 LSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFG 192
           LS N L   P +I  +  LK     NN L  +P EI +L  L  ++L GN LT IP +FG
Sbjct: 348 LSNNLLIALPPEIASMKALKEFEASNNQLQAIPTEIGELSGLTKINLSGNKLTSIPASFG 407

Query: 193 DLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           +L +L+   L  N++  LP ++  LK    + L +N L  LP E
Sbjct: 408 NLSELQICDLKSNEIAELPTTLDGLKSCTKIDLSHNMLTELPWE 451



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 73/243 (30%), Positives = 113/243 (46%), Gaps = 33/243 (13%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
            N+L   P   S +  L  L++SNN++  LP  I     LSTL    N L  + LP+++S
Sbjct: 163 KNSLKSLPSEISGWVKLEELNVSNNQLAFLPNQICLLGLLSTLNVGFNKL--QQLPEELS 220

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN- 182
           ++ +L   +L  N   Q+  Q+ ++  LK L + N  + H+P  +  L +L  L +  N 
Sbjct: 221 SMVSLTNLDLKVNPPLQYVPQLSNLRQLKILSIRNLQITHLPLGLGLLSELIELDIRDNP 280

Query: 183 SLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR----------- 231
            L +IP     L  L+ L L  N +  +P  + NL  L++L L  NKL            
Sbjct: 281 QLKEIPYDIATLINLQKLDLFGNNMRIVPREVGNLINLQTLDLRQNKLTIDNIPSEIGKL 340

Query: 232 --------------TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRD 277
                          LP EI ++K L E   S    NN+L+ +PTEI  L  L++++L  
Sbjct: 341 VNLKKLLLSNNLLIALPPEIASMKALKEFEAS----NNQLQAIPTEIGELSGLTKINLSG 396

Query: 278 NPL 280
           N L
Sbjct: 397 NKL 399



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 77/224 (34%), Positives = 113/224 (50%), Gaps = 13/224 (5%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLS-NNRITHLPQAITNFPLSTLIARNNLLTAE 116
           + TL +  N L   P+  S   +L +LDL  N  + ++PQ      L  L  RN  L   
Sbjct: 202 LSTLNVGFNKLQQLPEELSSMVSLTNLDLKVNPPLQYVPQLSNLRQLKILSIRN--LQIT 259

Query: 117 SLPKDMSNLKNLKVFNLSGN-QLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            LP  +  L  L   ++  N QL++ P  I  +  L+ L L  N++  VPRE+  L  L 
Sbjct: 260 HLPLGLGLLSELIELDIRDNPQLKEIPYDIATLINLQKLDLFGNNMRIVPREVGNLINLQ 319

Query: 176 VLSLGGNSLT--DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
            L L  N LT  +IP   G L  L+ L+LS+N L +LP  I+++K LK     NN+L+ +
Sbjct: 320 TLDLRQNKLTIDNIPSEIGKLVNLKKLLLSNNLLIALPPEIASMKALKEFEASNNQLQAI 379

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRD 277
           PTEI  L  L++    + L  NKL ++P    +   LSEL + D
Sbjct: 380 PTEIGELSGLTK----INLSGNKLTSIPA---SFGNLSELQICD 416



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 69/214 (32%), Positives = 107/214 (50%), Gaps = 12/214 (5%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           E ++ L +  N L  FP    K  NL+  + S N +  LP  I+ +  L  L   NN L 
Sbjct: 131 EALEYLDISDNQLQSFPLEFGKLYNLQVFNCSKNSLKSLPSEISGWVKLEELNVSNNQLA 190

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG-NNSLNHVPREINKLCK 173
              LP  +  L  L   N+  N+L+Q P ++  + +L  L L  N  L +VP +++ L +
Sbjct: 191 F--LPNQICLLGLLSTLNVGFNKLQQLPEELSSMVSLTNLDLKVNPPLQYVP-QLSNLRQ 247

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDN-QLESLPASISNLKMLKSLLLHNNKLRT 232
           L +LS+    +T +P   G L +L  L + DN QL+ +P  I+ L  L+ L L  N +R 
Sbjct: 248 LKILSIRNLQITHLPLGLGLLSELIELDIRDNPQLKEIPYDIATLINLQKLDLFGNNMRI 307

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRT--LPTEI 264
           +P E+  L      L++L L  NKL    +P+EI
Sbjct: 308 VPREVGNLI----NLQTLDLRQNKLTIDNIPSEI 337



 Score = 55.8 bits (133), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 35/158 (22%)

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSD------- 204
           K L L  N L  +P EI KL K+ ++    N +  IP   G L  L+ L LS+       
Sbjct: 40  KELLLSENDLITIPEEIGKLSKVEIIDFAKNRINYIPPEIGSLATLKQLFLSNNKLFYTP 99

Query: 205 ------------------NQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
                             NQL+ LP  ISN + L+ L + +N+L++ P E         K
Sbjct: 100 ITPNIGALKNLTRLDLSSNQLDDLPVEISNCEALEYLDISDNQLQSFPLEF-------GK 152

Query: 247 LKSLLLHN---NKLRTLPTEIITLKCLSELSLRDNPLV 281
           L +L + N   N L++LP+EI     L EL++ +N L 
Sbjct: 153 LYNLQVFNCSKNSLKSLPSEISGWVKLEELNVSNNQLA 190



 Score = 40.8 bits (94), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 38/113 (33%), Positives = 56/113 (49%), Gaps = 7/113 (6%)

Query: 170 KLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
           K  K  ++ L   ++  +P T G L Q + L+LS+N L ++P  I  L  ++ +    N+
Sbjct: 13  KYRKREIVDLRKMNIDKLPPTIGAL-QCKELLLSENDLITIPEEIGKLSKVEIIDFAKNR 71

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPT--EIITLKCLSELSLRDNPL 280
           +  +P EI +L      LK L L NNKL   P    I  LK L+ L L  N L
Sbjct: 72  INYIPPEIGSLAT----LKQLFLSNNKLFYTPITPNIGALKNLTRLDLSSNQL 120


>gi|327263159|ref|XP_003216388.1| PREDICTED: protein LAP2-like isoform 2 [Anolis carolinensis]
          Length = 1295

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 112/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTL--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             M +LK+L   ++S N +E     I    +L+ L L +NSL  +P  I  L KL +L +
Sbjct: 224 GFMGSLKHLIYLDVSKNNIETLEEGISGCESLQDLLLSSNSLQQLPESIGCLKKLAILKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+S+  L  +++    +N L  LP EI  
Sbjct: 284 DENQLMYLPDSIGGLTSVEELDCSFNEIEALPSSVGQLSNIRTFAADHNFLTQLPPEIGN 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL  LP E+  ++ L  ++L DN L
Sbjct: 344 WKYVT----VLFLHSNKLEFLPEEMGDMQKLKVINLSDNRL 380



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 129/288 (44%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLD---------SETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++  LD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTALDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  +  ++  +                 
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    + GN LT IP   G L  L  L +S N +E+L   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDGNRLTLIPGFMGSLKHLIYLDVSKNNIETLEEGISGCESLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I  LK    KL  L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPESIGCLK----KLAILKIDENQLMYLPDSIGGLTSVEEL 304


>gi|194743364|ref|XP_001954170.1| GF16883 [Drosophila ananassae]
 gi|261277884|sp|B3LWU3.1|SUR8_DROAN RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|190627207|gb|EDV42731.1| GF16883 [Drosophila ananassae]
          Length = 641

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 123/228 (53%), Gaps = 10/228 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNA-SKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
            + T+ L  N  + +P    ++FTN+ S++L +NRI  +P  I +    L+ L  + N+L
Sbjct: 392 GLTTITLSRNQFTSYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENML 451

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA  LP D+    N+   NL+ N L++ P  I+++  L+ L L NN L  +P  I  L +
Sbjct: 452 TA--LPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRR 509

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N +  +P   G L++L+ LIL  NQ+  LP SI +L  L  L +  N L+ L
Sbjct: 510 LRILDLEENRIETLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFL 569

Query: 234 PTEIITLKCLSEKLKSLLLHNN-KLRTLPTEIITLKCLSELSLRDNPL 280
           P EI +L    E L++L ++ N  L  LP E+   + L  L++   PL
Sbjct: 570 PEEIGSL----ESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCPL 613



 Score = 83.6 bits (205), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/271 (29%), Positives = 117/271 (43%), Gaps = 45/271 (16%)

Query: 14  SDSDSFKTV------SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNN 67
           +D D  K +       IK LD S SS         I ++P+    K    I  L LY N 
Sbjct: 146 ADQDVIKALQRCRDEGIKRLDLSKSS---------ITVIPSTV--KDCVQITELYLYSNK 194

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKN 127
           +   P       NLR+L L+ N +T                        SLP+ + N   
Sbjct: 195 IGQLPPEIGCLVNLRNLALNENSLT------------------------SLPESLQNCNQ 230

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           LKV +L  N+L + P  I  + +L  LYL  N +  V  ++ +L  L +LSL  N + ++
Sbjct: 231 LKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLVNLTMLSLRENKIREL 290

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
               G L  L  L +S N LE LP  I N   L +L L +N+L  +P  I  LK L    
Sbjct: 291 GSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVR-- 348

Query: 248 KSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
             L +  N+L ++P  +   KC+ E ++  N
Sbjct: 349 --LGMRYNRLTSVPATLKNCKCMDEFNVEGN 377



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 59/186 (31%), Positives = 96/186 (51%), Gaps = 4/186 (2%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           + + +  L +  N L+  P +   + N+  L+L+ N +  LP  I N   L  LI  NN+
Sbjct: 437 RAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNM 496

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L  + +P  + NL+ L++ +L  N++E  P +I  +  L+ L L  N +  +PR I  L 
Sbjct: 497 L--KKIPNTIGNLRRLRILDLEENRIETLPHEIGLLHELQRLILQTNQITMLPRSIGHLG 554

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDN-QLESLPASISNLKMLKSLLLHNNKLR 231
            L  LS+  N+L  +P+  G L  LE L ++ N  LE LP  ++  + LK L +    L 
Sbjct: 555 NLTHLSVSENNLQFLPEEIGSLESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCPLS 614

Query: 232 TLPTEI 237
           T+P EI
Sbjct: 615 TIPPEI 620



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 13/165 (7%)

Query: 34  LDSETLATQIEL-LPNNDYNKKP------ENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           LD  T    +EL L  N   K P      +N++ L+L +N L   P+       LR LDL
Sbjct: 456 LDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDL 515

Query: 87  SNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI 145
             NRI  LP  I     L  LI + N +T   LP+ + +L NL   ++S N L+  P +I
Sbjct: 516 EENRIETLPHEIGLLHELQRLILQTNQITM--LPRSIGHLGNLTHLSVSENNLQFLPEEI 573

Query: 146 LDIPTLKYLYLGNN-SLNHVPREINKLCK-LHVLSLGGNSLTDIP 188
             + +L+ LY+  N  L  +P E+  LC+ L  L++    L+ IP
Sbjct: 574 GSLESLENLYINQNPGLEKLPFEL-ALCQNLKYLNIDKCPLSTIP 617


>gi|198451363|ref|XP_002137290.1| GA27118 [Drosophila pseudoobscura pseudoobscura]
 gi|261277894|sp|B5DX45.1|SUR8_DROPS RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|198131455|gb|EDY67848.1| GA27118 [Drosophila pseudoobscura pseudoobscura]
          Length = 629

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 123/228 (53%), Gaps = 10/228 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNA-SKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
            + T+ L  N  + +P    ++FTN+ S++L +NRI  +P  I +    L+ L  + N+L
Sbjct: 380 GLTTITLSRNQFTSYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENML 439

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA  LP D+    N+   NL+ N L++ P  I+++  L+ L L NN L  +P  I  + K
Sbjct: 440 TA--LPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNMRK 497

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N +  +P   G L++L+ LIL  NQ+  LP SI +L  L  L +  N L+ L
Sbjct: 498 LRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLSNLTHLSVSENNLQFL 557

Query: 234 PTEIITLKCLSEKLKSLLLHNN-KLRTLPTEIITLKCLSELSLRDNPL 280
           P EI +L    E L++L ++ N  L  LP E+   + L  L++   PL
Sbjct: 558 PEEIGSL----EGLENLYINQNPGLEKLPFELALCQNLKYLNIDKCPL 601



 Score = 85.5 bits (210), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 109/229 (47%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           + E I  L L  ++++  P    +  +L  L L +N+I  LP  I     L  L    N 
Sbjct: 146 RDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPAEIGCLVNLRNLALNENS 205

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  SLP+ + N K LKV +L  N+L + P  I  + TL  LYL  N +  V   + +L 
Sbjct: 206 LT--SLPESLQNCKQLKVLDLRHNKLAEIPPVIYRLRTLTTLYLRFNRITAVADNLRQLV 263

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L +LSL  N + ++    G L  L  L +S N LE LP  I N   L +L L +N+L  
Sbjct: 264 NLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLD 323

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +P  I  LK L      L L  N+L ++P  +   K + E ++  N + 
Sbjct: 324 IPDSIGNLKSLVR----LGLRYNRLSSVPATLKNCKSMDEFNVEGNGMT 368



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 81/266 (30%), Positives = 126/266 (47%), Gaps = 38/266 (14%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ TL + HN+L   P++     NL +LDL +N +  +P +I N   L  L  R N L+ 
Sbjct: 287 NLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGLRYNRLS- 345

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQIL-----------------DIPT-------- 150
            S+P  + N K++  FN+ GN + Q P  +L                   PT        
Sbjct: 346 -SVPATLKNCKSMDEFNVEGNGMTQLPDGMLASLSGLTTITLSRNQFTSYPTGGPAQFTN 404

Query: 151 LKYLYLGNNSLNHVPREINKLCK-LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
           +  + L +N ++ +P  I    K L  L++  N LT +P   G    +  L L+ N L+ 
Sbjct: 405 VYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDIGTWVNMVELNLATNALQK 464

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           LP  I NL+ L+ L+L NN L+ +P  I  ++    KL+ L L  N++  LP EI  L  
Sbjct: 465 LPDDIMNLQNLEILILSNNMLKKIPNTIGNMR----KLRILDLEENRIEVLPHEIGLLHE 520

Query: 270 LSELSLRDN-----PLVIRFVSDMTY 290
           L  L L+ N     P  I  +S++T+
Sbjct: 521 LQRLILQTNQITMLPRSIGHLSNLTH 546



 Score = 81.6 bits (200), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 126/268 (47%), Gaps = 24/268 (8%)

Query: 14  SDSDSFKTV------SIKTLDFSYSSLD--SETLATQIEL----LPNNDYNKKPENIDTL 61
           +D D  K +       IK LD S SS+     T+   + L    L +N   + P  I  L
Sbjct: 134 ADQDVIKALQRCRDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPAEIGCL 193

Query: 62  L------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +      L  N+L+  P++      L+ LDL +N++  +P  I     L+TL  R N +T
Sbjct: 194 VNLRNLALNENSLTSLPESLQNCKQLKVLDLRHNKLAEIPPVIYRLRTLTTLYLRFNRIT 253

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  +  ++  L NL + +L  N++ +    I  +  L  L + +N L H+P +I     L
Sbjct: 254 A--VADNLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNL 311

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L DIPD+ G+L  L  L L  N+L S+PA++ N K +    +  N +  LP
Sbjct: 312 SALDLQHNELLDIPDSIGNLKSLVRLGLRYNRLSSVPATLKNCKSMDEFNVEGNGMTQLP 371

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPT 262
             +  L  LS  L ++ L  N+  + PT
Sbjct: 372 DGM--LASLS-GLTTITLSRNQFTSYPT 396



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 80/165 (48%), Gaps = 13/165 (7%)

Query: 34  LDSETLATQIEL-LPNNDYNKKP------ENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           LD  T    +EL L  N   K P      +N++ L+L +N L   P+       LR LDL
Sbjct: 444 LDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNMRKLRILDL 503

Query: 87  SNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI 145
             NRI  LP  I     L  LI + N +T   LP+ + +L NL   ++S N L+  P +I
Sbjct: 504 EENRIEVLPHEIGLLHELQRLILQTNQITM--LPRSIGHLSNLTHLSVSENNLQFLPEEI 561

Query: 146 LDIPTLKYLYLGNN-SLNHVPREINKLCK-LHVLSLGGNSLTDIP 188
             +  L+ LY+  N  L  +P E+  LC+ L  L++    L+ IP
Sbjct: 562 GSLEGLENLYINQNPGLEKLPFEL-ALCQNLKYLNIDKCPLSTIP 605


>gi|195349129|ref|XP_002041099.1| GM15368 [Drosophila sechellia]
 gi|261277895|sp|B4IBI9.1|SUR8_DROSE RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|194122704|gb|EDW44747.1| GM15368 [Drosophila sechellia]
          Length = 683

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 123/228 (53%), Gaps = 10/228 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNA-SKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
            + T+ L  N  + +P    ++FTN+ S++L +NRI  +P  I +    L+ L  + N+L
Sbjct: 395 GLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENML 454

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA  LP D+    N+   NL+ N L++ P  I+++  L+ L L NN L  +P  I  L +
Sbjct: 455 TA--LPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRR 512

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N +  +P   G L++L+ LIL  NQ+  LP SI +L  L  L +  N L+ L
Sbjct: 513 LRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFL 572

Query: 234 PTEIITLKCLSEKLKSLLLHNN-KLRTLPTEIITLKCLSELSLRDNPL 280
           P EI +L    E L++L ++ N  L  LP E+   + L  L++   PL
Sbjct: 573 PEEIGSL----ESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCPL 616



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 127/268 (47%), Gaps = 24/268 (8%)

Query: 14  SDSDSFKTV------SIKTLDFSYSSLD--SETLATQIEL----LPNNDYNKKPENIDTL 61
           +D D  K +       IK LD S SS+     T+   + L    L +N   + P  I  L
Sbjct: 149 ADQDVIKALQRCRDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCL 208

Query: 62  L------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +      L  N+L+  P++    + L+ LDL +N++  +P  I     L+TL  R N +T
Sbjct: 209 VSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPSVIYRLRSLTTLYLRFNRIT 268

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  +  D+  L NL + +L  N++ +    I  +  L  L + +N L H+P +I     L
Sbjct: 269 A--VADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNL 326

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L DIPD+ G+L  L  L +  N+L S+PA++ N K +    +  N +  LP
Sbjct: 327 SALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLP 386

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPT 262
             +  L  LS  L ++ L  N+  + PT
Sbjct: 387 DGM--LASLS-GLTTITLSRNQFASYPT 411



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 109/229 (47%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           + E I  L L  ++++  P    +  +L  L L +N+I  LP  I     L  L    N 
Sbjct: 161 RDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENS 220

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  SLP+ + N   LKV +L  N+L + P  I  + +L  LYL  N +  V  ++ +L 
Sbjct: 221 LT--SLPESLQNCSQLKVLDLRHNKLAEIPSVIYRLRSLTTLYLRFNRITAVADDLRQLV 278

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L +LSL  N + ++    G L  L  L +S N LE LP  I N   L +L L +N+L  
Sbjct: 279 NLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLD 338

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +P  I  LK L      L +  N+L ++P  +   K + E ++  N + 
Sbjct: 339 IPDSIGNLKSLVR----LGMRYNRLSSVPATLKNCKSMDEFNVEGNGIT 383



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 13/165 (7%)

Query: 34  LDSETLATQIEL-LPNNDYNKKP------ENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           LD  T    +EL L  N   K P      +N++ L+L +N L   P+       LR LDL
Sbjct: 459 LDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDL 518

Query: 87  SNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI 145
             NRI  LP  I     L  LI + N +T   LP+ + +L NL   ++S N L+  P +I
Sbjct: 519 EENRIEVLPHEIGLLHELQRLILQTNQITM--LPRSIGHLGNLTHLSVSENNLQFLPEEI 576

Query: 146 LDIPTLKYLYLGNN-SLNHVPREINKLCK-LHVLSLGGNSLTDIP 188
             + +L+ LY+  N  L  +P E+  LC+ L  L++    L+ IP
Sbjct: 577 GSLESLENLYINQNPGLEKLPFEL-ALCQNLKYLNIDKCPLSTIP 620


>gi|359727345|ref|ZP_09266041.1| leucine-rich repeat-containing protein [Leptospira weilii str.
           2006001855]
          Length = 674

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 124/228 (54%), Gaps = 10/228 (4%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           +N++ L L  N ++   +    F  +  L L  NR+T L + I NFP     L+ RN L 
Sbjct: 433 KNLEELNLGGNFITGISNLTRAFAQIEELGLYENRLTSL-EGIRNFPNLKQLLVWRNEL- 490

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
             E++P ++++LK L   +L+ N++   P   +++ ++K L LG N ++ +P  + +   
Sbjct: 491 --ETIPVEIADLKKLIRIDLTKNRISNLPDLGMELESVKELSLGGNRISKLPEFLVRFPN 548

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  LSL  N L ++ D FG+  +LE L  S+N L SLP SI+ L+ L  L L NNK   +
Sbjct: 549 LSSLSLSDNQLEELSDLFGNFKKLEYLSFSNNALASLPVSIAQLESLNDLSLKNNKFGEI 608

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           P     +    +KLK L +++N++  LP  +  +K L EL + +NP+ 
Sbjct: 609 P----EILKKLKKLKELWMNDNQISELPEFLSEMKALRELKIGNNPIA 652



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 68/221 (30%), Positives = 106/221 (47%), Gaps = 22/221 (9%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           N+R++ +   ++T  P  +   P L +L   +N    E+   ++SN  N++  +++ + L
Sbjct: 341 NIRTISIEKTQLTEFPDFLLGIPSLRSLYFTDNGPFTEN-KTNISNFSNVEELSINNSAL 399

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
            + P  +  +  LK L + NN L   P+ +  L  L  L+LGGN +T I +      Q+E
Sbjct: 400 VEIPEFVFQLSKLKKLLVMNNRLTEFPKRLADLKNLEELNLGGNFITGISNLTRAFAQIE 459

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS-------------- 244
            L L +N+L SL   I N   LK LL+  N+L T+P EI  LK L               
Sbjct: 460 ELGLYENRLTSLEG-IRNFPNLKQLLVWRNELETIPVEIADLKKLIRIDLTKNRISNLPD 518

Query: 245 -----EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
                E +K L L  N++  LP  ++    LS LSL DN L
Sbjct: 519 LGMELESVKELSLGGNRISKLPEFLVRFPNLSSLSLSDNQL 559



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 57/182 (31%), Positives = 92/182 (50%), Gaps = 3/182 (1%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQ-AITNFPLSTLIARNNLLTA 115
           N+  LL++ N L   P   +    L  +DL+ NRI++LP   +    +  L    N ++ 
Sbjct: 479 NLKQLLVWRNELETIPVEIADLKKLIRIDLTKNRISNLPDLGMELESVKELSLGGNRIS- 537

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+ +    NL   +LS NQLE+      +   L+YL   NN+L  +P  I +L  L+
Sbjct: 538 -KLPEFLVRFPNLSSLSLSDNQLEELSDLFGNFKKLEYLSFSNNALASLPVSIAQLESLN 596

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            LSL  N   +IP+    L +L+ L ++DNQ+  LP  +S +K L+ L + NN +     
Sbjct: 597 DLSLKNNKFGEIPEILKKLKKLKELWMNDNQISELPEFLSEMKALRELKIGNNPIAQNQE 656

Query: 236 EI 237
           E+
Sbjct: 657 EV 658


>gi|301103829|ref|XP_002901000.1| conserved hypothetical protein [Phytophthora infestans T30-4]
 gi|262101338|gb|EEY59390.1| conserved hypothetical protein [Phytophthora infestans T30-4]
          Length = 1178

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 88/268 (32%), Positives = 134/268 (50%), Gaps = 32/268 (11%)

Query: 32  SSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRI 91
           S LD+  L+++I  L         + + +L+L  N L+  P       +L  LD+S N++
Sbjct: 226 SGLDAWKLSSRIWNL---------QYLKSLVLSRNCLTRIPSGIQDLIHLEELDVSFNQL 276

Query: 92  THLPQAI-TNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPT 150
           T LP  + T   L+++ A +NL+   S PK +  L+ ++  +LS N+L++ P    D+  
Sbjct: 277 TRLPSCLQTTTSLTSICASHNLIQTFS-PK-LWKLREIRYLDLSYNRLKELPFVEGDLKL 334

Query: 151 LK----------------YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
           L+                 L L NN L  VP+ I K   L +L +  N L+ + D    L
Sbjct: 335 LRETGEWQVGVGLLEHLQVLRLSNNQLVEVPKSIEKCSHLTLLDISNNQLSSLSDEISAL 394

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHN 254
             L  +IL  N L  LP +I NL+ML+ L L +N L TLP  I  L+     LK+L L +
Sbjct: 395 TSLHRMILHHNALHELPEAIGNLEMLQELDLAHNSLVTLPESIGMLR----NLKTLTLVS 450

Query: 255 NKLRTLPTEIITLKCLSELSLRDNPLVI 282
           N+LR LP E  +L  L  L L +NP +I
Sbjct: 451 NQLRLLPNEFGSLSQLRHLDLDNNPKLI 478



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 86/271 (31%), Positives = 127/271 (46%), Gaps = 32/271 (11%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSN 124
           HN +  F     K   +R LDLS NR+  LP    +  L        L         +  
Sbjct: 296 HNLIQTFSPKLWKLREIRYLDLSYNRLKELPFVEGDLKL--------LRETGEWQVGVGL 347

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L++L+V  LS NQL + P  I     L  L + NN L+ +  EI+ L  LH + L  N+L
Sbjct: 348 LEHLQVLRLSNNQLVEVPKSIEKCSHLTLLDISNNQLSSLSDEISALTSLHRMILHHNAL 407

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
            ++P+  G+L  L+ L L+ N L +LP SI  L+ LK+L L +N+LR LP E  +L    
Sbjct: 408 HELPEAIGNLEMLQELDLAHNSLVTLPESIGMLRNLKTLTLVSNQLRLLPNEFGSLS--- 464

Query: 245 EKLKSLLLHNNK--------LRTLPT---------EIITLKCLSELSLRDNPLV-IRFVS 286
            +L+ L L NN          R LP+          I+T   L    L+D+P+  +R   
Sbjct: 465 -QLRHLDLDNNPKLITLEAFFRHLPSVEFLSASSCGIVTFASLD--FLKDSPVEKLRLNH 521

Query: 287 DMTYKPPSLLELASRTLKVHEIDYSQEHLPQ 317
           +   + P L+  A+    + E+D S  HL Q
Sbjct: 522 NALQEFPLLIGHAAMQDTLQELDLSDSHLTQ 552



 Score = 74.3 bits (181), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 114/246 (46%), Gaps = 21/246 (8%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNN-RITHLPQAITNFPLSTLIARN--NLL 113
           N+ TL L  N L   P+     + LR LDL NN ++  L     + P    ++ +   ++
Sbjct: 442 NLKTLTLVSNQLRLLPNEFGSLSQLRHLDLDNNPKLITLEAFFRHLPSVEFLSASSCGIV 501

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIP---TLKYLYLGNNSLNHVPREINK 170
           T  SL  D      ++   L+ N L++FP+ I       TL+ L L ++ L  VP  +  
Sbjct: 502 TFASL--DFLKDSPVEKLRLNHNALQEFPLLIGHAAMQDTLQELDLSDSHLTQVPLAVLL 559

Query: 171 LCK-LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
            C  L    L  NSL  +P   G L +LE L LS N L++LP  ++ L  L+ L   +N+
Sbjct: 560 YCSHLQYFDLSSNSLRVLPTEIGHLRRLEVLNLSSNTLQALPDELTQLPRLRQLKCDHNQ 619

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMT 289
           L  LP  +  L     +L  L +  N+LR++PT ++ +  L  L   DN         M 
Sbjct: 620 LGQLPLRLGNLV----QLTKLNVSFNRLRSMPTSLMEMTQLQSLYASDNL--------MA 667

Query: 290 YKPPSL 295
             PP+L
Sbjct: 668 TPPPAL 673



 Score = 61.6 bits (148), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 119/279 (42%), Gaps = 61/279 (21%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRIT----------------------- 92
           E++  L L +N L   P +  K ++L  LD+SNN+++                       
Sbjct: 349 EHLQVLRLSNNQLVEVPKSIEKCSHLTLLDISNNQLSSLSDEISALTSLHRMILHHNALH 408

Query: 93  HLPQAITNFPL--STLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPT 150
            LP+AI N  +     +A N+L+T   LP+ +  L+NLK   L  NQL   P +   +  
Sbjct: 409 ELPEAIGNLEMLQELDLAHNSLVT---LPESIGMLRNLKTLTLVSNQLRLLPNEFGSLSQ 465

Query: 151 LKYLYLGNNS--------LNHVPR-----------------EINKLCKLHVLSLGGNSLT 185
           L++L L NN           H+P                  +  K   +  L L  N+L 
Sbjct: 466 LRHLDLDNNPKLITLEAFFRHLPSVEFLSASSCGIVTFASLDFLKDSPVEKLRLNHNALQ 525

Query: 186 DIPDTFGDLYQ---LEALILSDNQLESLP-ASISNLKMLKSLLLHNNKLRTLPTEIITLK 241
           + P   G       L+ L LSD+ L  +P A +     L+   L +N LR LPTEI  L+
Sbjct: 526 EFPLLIGHAAMQDTLQELDLSDSHLTQVPLAVLLYCSHLQYFDLSSNSLRVLPTEIGHLR 585

Query: 242 CLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
               +L+ L L +N L+ LP E+  L  L +L    N L
Sbjct: 586 ----RLEVLNLSSNTLQALPDELTQLPRLRQLKCDHNQL 620



 Score = 48.1 bits (113), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 59/225 (26%), Positives = 88/225 (39%), Gaps = 58/225 (25%)

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A+ +     + +   + N+SG    +   +I ++  LK L L  N L  +P  I  L  L
Sbjct: 207 AQQIVDTAEDAEQAPILNMSGLDAWKLSSRIWNLQYLKSLVLSRNCLTRIPSGIQDLIHL 266

Query: 175 HVLSLGGNSLTDIP-------------------DTFG----DLYQLEALILSDNQLESLP 211
             L +  N LT +P                    TF      L ++  L LS N+L+ LP
Sbjct: 267 EELDVSFNQLTRLPSCLQTTTSLTSICASHNLIQTFSPKLWKLREIRYLDLSYNRLKELP 326

Query: 212 ASISNLKMLKS----------------LLLHNNKLRTLPTEII-------------TLKC 242
               +LK+L+                 L L NN+L  +P  I               L  
Sbjct: 327 FVEGDLKLLRETGEWQVGVGLLEHLQVLRLSNNQLVEVPKSIEKCSHLTLLDISNNQLSS 386

Query: 243 LSEKLKSL------LLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           LS+++ +L      +LH+N L  LP  I  L+ L EL L  N LV
Sbjct: 387 LSDEISALTSLHRMILHHNALHELPEAIGNLEMLQELDLAHNSLV 431


>gi|359319031|ref|XP_003638976.1| PREDICTED: protein LAP2-like isoform 1 [Canis lupus familiaris]
          Length = 1372

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  +++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 135/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI-ARNNLLTA----------- 115
           L+  P + +   NLR LD+S N I   P+ I N  + T++ A  N ++            
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNL 140

Query: 116 ----------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                     E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    + GN LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNVT----TLKIDENQLMYLPDSIGGLVSIEEL 304


>gi|301767856|ref|XP_002919341.1| PREDICTED: protein LAP2-like isoform 2 [Ailuropoda melanoleuca]
          Length = 1372

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  +++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 133/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    + GN LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNVT----TLKIDENQLMYLPDSIGGLVSIEEL 304


>gi|195391504|ref|XP_002054400.1| GJ22826 [Drosophila virilis]
 gi|261277888|sp|B4LXW1.1|SUR8_DROVI RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|194152486|gb|EDW67920.1| GJ22826 [Drosophila virilis]
          Length = 614

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 123/227 (54%), Gaps = 10/227 (4%)

Query: 58  IDTLLLYHNNLSFFPDNA-SKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLT 114
           + T+ L  N  + +P    ++FTN+ S++L +NRI  +P  I +    L+ L  + N+LT
Sbjct: 366 LTTITLSRNQFTSYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLT 425

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  LP D+    N+   NL+ N L++ P  I+++  L+ L L NN L  +P  I  L KL
Sbjct: 426 A--LPLDVGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKL 483

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            +L L  N +  +P   G L++L+ LIL  NQ+  LP SI +L  L  L +  N L+ LP
Sbjct: 484 RILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLSNLTHLSVSENNLQFLP 543

Query: 235 TEIITLKCLSEKLKSLLLHNN-KLRTLPTEIITLKCLSELSLRDNPL 280
            EI +L    E L++L ++ N  L  LP E+   + L  L++   PL
Sbjct: 544 EEIGSL----ESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCPL 586



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 82/268 (30%), Positives = 127/268 (47%), Gaps = 24/268 (8%)

Query: 14  SDSDSFKTV------SIKTLDFSYSSLD--SETLATQIEL----LPNNDYNKKPENIDTL 61
           +D D  K +       IK LD S SS+     T+   + L    L +N   + P  I  L
Sbjct: 119 ADQDVIKALQRCRDEGIKRLDLSKSSITVLPNTVRECVHLTELYLYSNKIGQLPTEIGCL 178

Query: 62  L------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +      L  N+L+  P++    T L+ LDL +N++  +P  I     L+TL  R N +T
Sbjct: 179 VNLRNLALNENSLTSLPESLKHCTQLKVLDLRHNKLAEIPSVIYRLRSLTTLYLRFNRIT 238

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  +  D+  L NL + +L  N++++    I  +  L  L + +N L H+P +I     L
Sbjct: 239 A--VADDLRQLVNLTMLSLRENKIKELGSAIGALVNLTTLDVSHNHLEHLPDDIGNCVNL 296

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L DIPD+ G+L  L  L L  N+L S+P S+ N K +    +  N +  LP
Sbjct: 297 SALDLQHNELLDIPDSIGNLKSLVRLGLRYNRLNSVPISLKNCKSMDEFNVEGNGITQLP 356

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPT 262
             +  L  LS  L ++ L  N+  + PT
Sbjct: 357 DGM--LASLS-ALTTITLSRNQFTSYPT 381



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 83/266 (31%), Positives = 125/266 (46%), Gaps = 38/266 (14%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ TL + HN+L   PD+     NL +LDL +N +  +P +I N   L  L  R N L  
Sbjct: 272 NLTTLDVSHNHLEHLPDDIGNCVNLSALDLQHNELLDIPDSIGNLKSLVRLGLRYNRLN- 330

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQIL-----------------DIPT-------- 150
            S+P  + N K++  FN+ GN + Q P  +L                   PT        
Sbjct: 331 -SVPISLKNCKSMDEFNVEGNGITQLPDGMLASLSALTTITLSRNQFTSYPTGGPAQFTN 389

Query: 151 LKYLYLGNNSLNHVPREINKLCK-LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
           +  + L +N ++ +P  I    K L  L++  N LT +P   G    +  L L+ N L+ 
Sbjct: 390 VYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENMLTALPLDVGTWVNMVELNLATNALQK 449

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           LP  I NL+ L+ L+L NN L+ +P  I  L+    KL+ L L  N++  LP EI  L  
Sbjct: 450 LPDDIMNLQNLEILILSNNMLKKIPNTIGNLR----KLRILDLEENRIEVLPHEIGLLHE 505

Query: 270 LSELSLRDN-----PLVIRFVSDMTY 290
           L  L L+ N     P  I  +S++T+
Sbjct: 506 LQRLILQTNQITMLPRSIGHLSNLTH 531



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 109/226 (48%), Gaps = 7/226 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           + E I  L L  ++++  P+   +  +L  L L +N+I  LP  I     L  L    N 
Sbjct: 131 RDEGIKRLDLSKSSITVLPNTVRECVHLTELYLYSNKIGQLPTEIGCLVNLRNLALNENS 190

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  SLP+ + +   LKV +L  N+L + P  I  + +L  LYL  N +  V  ++ +L 
Sbjct: 191 LT--SLPESLKHCTQLKVLDLRHNKLAEIPSVIYRLRSLTTLYLRFNRITAVADDLRQLV 248

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L +LSL  N + ++    G L  L  L +S N LE LP  I N   L +L L +N+L  
Sbjct: 249 NLTMLSLRENKIKELGSAIGALVNLTTLDVSHNHLEHLPDDIGNCVNLSALDLQHNELLD 308

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           +P  I  LK L      L L  N+L ++P  +   K + E ++  N
Sbjct: 309 IPDSIGNLKSLVR----LGLRYNRLNSVPISLKNCKSMDEFNVEGN 350



 Score = 53.5 bits (127), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 50/149 (33%), Positives = 73/149 (48%), Gaps = 12/149 (8%)

Query: 34  LDSETLATQIEL-LPNNDYNKKP------ENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           LD  T    +EL L  N   K P      +N++ L+L +N L   P+       LR LDL
Sbjct: 429 LDVGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRKLRILDL 488

Query: 87  SNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI 145
             NRI  LP  I     L  LI + N +T   LP+ + +L NL   ++S N L+  P +I
Sbjct: 489 EENRIEVLPHEIGLLHELQRLILQTNQITM--LPRSIGHLSNLTHLSVSENNLQFLPEEI 546

Query: 146 LDIPTLKYLYLGNN-SLNHVPREINKLCK 173
             + +L+ LY+  N  L  +P E+  LC+
Sbjct: 547 GSLESLENLYINQNPGLEKLPFEL-ALCQ 574


>gi|281204955|gb|EFA79149.1| villin [Polysphondylium pallidum PN500]
          Length = 1501

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 92/282 (32%), Positives = 140/282 (49%), Gaps = 21/282 (7%)

Query: 67  NLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLK 126
           +L  FP   ++ T L++L L++N I  L        L  L    N L  + L  ++ ++ 
Sbjct: 32  HLVAFPMQLNQLTKLKTLSLAHNNIQKLDGVSQVLTLEDLDLSYNSL--QLLSDELYHVV 89

Query: 127 NLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTD 186
           NLK  N+S NQL+     I  +  LK L L NN L  +P+EI +   L ++++  N L  
Sbjct: 90  NLKKLNISFNQLQSIGANIALLKQLKVLNLSNNQLVAIPKEIGQSLSLQIINISFNKLEA 149

Query: 187 IPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEK 246
           +P   G L QL  L+L++N++ +LP+ I  L  L  L L  N+L++LP EI  LK L++ 
Sbjct: 150 LPKEIGLLNQLTKLVLNNNKIGTLPSDIGKLGQLTLLDLAENELKSLPHEIGQLKQLAK- 208

Query: 247 LKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTL--- 303
              L L NN    LP+E+  L  L EL+LR N LV     D+   P S+ +L   TL   
Sbjct: 209 ---LYLDNNDFLVLPSEVGQLSELKELNLRSNQLV-----DL---PSSMHKLTKLTLVDL 257

Query: 304 ---KVHEIDYSQEHLPQNLVQYLESAHHCVNPKCKGVFFDNR 342
              +     Y    +PQ L+ +L++    VN   K    + R
Sbjct: 258 EDNQWESSQYQATDIPQ-LLAFLKTKRDIVNKSRKATSKEYR 298



 Score = 94.7 bits (234), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 82/223 (36%), Positives = 117/223 (52%), Gaps = 10/223 (4%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLTA 115
           + TL L HNN+    D  S+   L  LDLS N +  L   + +   L  L I+ N L   
Sbjct: 46  LKTLSLAHNNIQKL-DGVSQVLTLEDLDLSYNSLQLLSDELYHVVNLKKLNISFNQL--- 101

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           +S+  +++ LK LKV NLS NQL   P +I    +L+ + +  N L  +P+EI  L +L 
Sbjct: 102 QSIGANIALLKQLKVLNLSNNQLVAIPKEIGQSLSLQIINISFNKLEALPKEIGLLNQLT 161

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N +  +P   G L QL  L L++N+L+SLP  I  LK L  L L NN    LP+
Sbjct: 162 KLVLNNNKIGTLPSDIGKLGQLTLLDLAENELKSLPHEIGQLKQLAKLYLDNNDFLVLPS 221

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           E+  L     +LK L L +N+L  LP+ +  L  L+ + L DN
Sbjct: 222 EVGQLS----ELKELNLRSNQLVDLPSSMHKLTKLTLVDLEDN 260



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 104/207 (50%), Gaps = 14/207 (6%)

Query: 19  FKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKF 78
           +  V++K L+ S++ L S  +   I LL         + +  L L +N L   P    + 
Sbjct: 86  YHVVNLKKLNISFNQLQS--IGANIALL---------KQLKVLNLSNNQLVAIPKEIGQS 134

Query: 79  TNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
            +L+ +++S N++  LP+ I     L+ L+  NN +   +LP D+  L  L + +L+ N+
Sbjct: 135 LSLQIINISFNKLEALPKEIGLLNQLTKLVLNNNKIG--TLPSDIGKLGQLTLLDLAENE 192

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           L+  P +I  +  L  LYL NN    +P E+ +L +L  L+L  N L D+P +   L +L
Sbjct: 193 LKSLPHEIGQLKQLAKLYLDNNDFLVLPSEVGQLSELKELNLRSNQLVDLPSSMHKLTKL 252

Query: 198 EALILSDNQLESLPASISNLKMLKSLL 224
             + L DNQ ES     +++  L + L
Sbjct: 253 TLVDLEDNQWESSQYQATDIPQLLAFL 279



 Score = 68.2 bits (165), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 64/213 (30%), Positives = 102/213 (47%), Gaps = 12/213 (5%)

Query: 20  KTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFT 79
           + ++++ LD SY+SL         +LL +  Y+    N+  L +  N L     N +   
Sbjct: 64  QVLTLEDLDLSYNSL---------QLLSDELYH--VVNLKKLNISFNQLQSIGANIALLK 112

Query: 80  NLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLE 139
            L+ L+LSNN++  +P+ I    LS  I   +    E+LPK++  L  L    L+ N++ 
Sbjct: 113 QLKVLNLSNNQLVAIPKEIGQ-SLSLQIINISFNKLEALPKEIGLLNQLTKLVLNNNKIG 171

Query: 140 QFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEA 199
             P  I  +  L  L L  N L  +P EI +L +L  L L  N    +P   G L +L+ 
Sbjct: 172 TLPSDIGKLGQLTLLDLAENELKSLPHEIGQLKQLAKLYLDNNDFLVLPSEVGQLSELKE 231

Query: 200 LILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
           L L  NQL  LP+S+  L  L  + L +N+  +
Sbjct: 232 LNLRSNQLVDLPSSMHKLTKLTLVDLEDNQWES 264



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 41/170 (24%)

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGG----------------------NSLTDIPD 189
           ++L +    L   P ++N+L KL  LSL                        NSL  + D
Sbjct: 24  EFLEINGRHLVAFPMQLNQLTKLKTLSLAHNNIQKLDGVSQVLTLEDLDLSYNSLQLLSD 83

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEI---ITLKCLS-- 244
               +  L+ L +S NQL+S+ A+I+ LK LK L L NN+L  +P EI   ++L+ ++  
Sbjct: 84  ELYHVVNLKKLNISFNQLQSIGANIALLKQLKVLNLSNNQLVAIPKEIGQSLSLQIINIS 143

Query: 245 --------------EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
                          +L  L+L+NNK+ TLP++I  L  L+ L L +N L
Sbjct: 144 FNKLEALPKEIGLLNQLTKLVLNNNKIGTLPSDIGKLGQLTLLDLAENEL 193


>gi|348555824|ref|XP_003463723.1| PREDICTED: protein scribble homolog isoform 3 [Cavia porcellus]
          Length = 1601

 Score =  101 bits (252), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 72/223 (32%), Positives = 113/223 (50%), Gaps = 10/223 (4%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF- 101
           ++ +P   Y +   +++ LLL  N L   P    +  NLR L LS+N I  LP  + NF 
Sbjct: 24  LQAVPEEIY-RYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 102 PLSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
            L  L ++RN++     +P+ +   K+L++ + SGN L + P     + +L +L L + S
Sbjct: 83  QLVELDVSRNDI---PEIPESIKFCKSLEIADFSGNPLSRLPDGFTQLRSLAHLALNDVS 139

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P ++  L  L  L L  N L  +P +   L +LE L L  N LE LP ++  L  L
Sbjct: 140 LQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNL 199

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTE 263
           + L L  N+L  LP E+  L+    +L  L +  N+L  LP E
Sbjct: 200 RELWLDRNQLSALPPELGNLR----RLVCLDVSENRLEELPVE 238



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 77/225 (34%), Positives = 113/225 (50%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ TL L  N L   P + S    L  LDL  N +  LP  +   P L  L    N L+A
Sbjct: 152 NLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSA 211

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP ++ NL+ L   ++S N+LE+ P+++  +  L  L L  N L  +P  I +L +L 
Sbjct: 212 --LPPELGNLRRLVCLDVSENRLEELPVELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N L ++ +  GD   L  LIL++N L +LP S+  L  L +L +  N L  LP 
Sbjct: 270 ILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI    C++  L  L L +N+L TLP E+     L  L +  N L
Sbjct: 330 EI--GGCVA--LSVLSLRDNRLATLPPELAHTAELHVLDVAGNRL 370



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 97/358 (27%), Positives = 144/358 (40%), Gaps = 90/358 (25%)

Query: 29  FSYSSLDSETL--ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           + YS    E L  A Q+  LP   +  +  N+  L L  N +   P   + F  L  LD+
Sbjct: 32  YRYSRSLEELLLDANQLRELPKPFF--RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDV 89

Query: 87  SNNRITHLPQAI-----------TNFPLSTL------------IARNNLLTAESLPKDMS 123
           S N I  +P++I           +  PLS L            +A N++ + ++LP D+ 
Sbjct: 90  SRNDIPEIPESIKFCKSLEIADFSGNPLSRLPDGFTQLRSLAHLALNDV-SLQALPGDVG 148

Query: 124 NLKN-----------------------LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
           NL N                       L+  +L GN LE  P  +  +P L+ L+L  N 
Sbjct: 149 NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQ 208

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTD-----------------------IPDTFGDLYQL 197
           L+ +P E+  L +L  L +  N L +                       +PD  G L QL
Sbjct: 209 LSALPPELGNLRRLVCLDVSENRLEELPVELGGLVLLTDLLLSQNLLQRLPDGIGQLKQL 268

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
             L +  N+L  +  +I + + L  L+L  N L  LP  +  L     KL +L +  N L
Sbjct: 269 SILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLT----KLTNLNVDRNHL 324

Query: 258 RTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHL 315
             LP EI     LS LSLRDN L           PP L    + T ++H +D +   L
Sbjct: 325 EVLPPEIGGCVALSVLSLRDNRLATL--------PPEL----AHTAELHVLDVAGNRL 370



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 99/204 (48%), Gaps = 10/204 (4%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ S+D  +  +  +P+ I  +   L  L+   N L    LPK    L NL+   LS N+
Sbjct: 13  HVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQL--RELPKPFFRLLNLRKLGLSDNE 70

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK-LHVLSLGGNSLTDIPDTFGDLYQ 196
           +++ P ++ +   L  L +  N +  +P  I K CK L +    GN L+ +PD F  L  
Sbjct: 71  IQRLPPEVANFMQLVELDVSRNDIPEIPESI-KFCKSLEIADFSGNPLSRLPDGFTQLRS 129

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
           L  L L+D  L++LP  + NL  L +L L  N L++LP  +  L     KL+ L L  N 
Sbjct: 130 LAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV----KLEQLDLGGND 185

Query: 257 LRTLPTEIITLKCLSELSLRDNPL 280
           L  LP  +  L  L EL L  N L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQL 209



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 70/219 (31%), Positives = 102/219 (46%), Gaps = 10/219 (4%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLP-QAITNF 101
           +E+LP  D      N+  L L  N LS  P        L  LD+S NR+  LP +     
Sbjct: 186 LEVLP--DTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLV 243

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L+ L+   NLL  + LP  +  LK L +  +  N+L +    I D   L  L L  N L
Sbjct: 244 LLTDLLLSQNLL--QRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLL 301

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +PR + KL KL  L++  N L  +P   G    L  L L DN+L +LP  +++   L 
Sbjct: 302 TALPRSLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSVLSLRDNRLATLPPELAHTAELH 361

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L +  N+LR+LP  +  L      LK+L L  N+ + +
Sbjct: 362 VLDVAGNRLRSLPFALTHL-----NLKALWLAENQAQPM 395


>gi|301767854|ref|XP_002919340.1| PREDICTED: protein LAP2-like isoform 1 [Ailuropoda melanoleuca]
          Length = 1420

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  +++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 133/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLD---------SETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    + GN LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNVT----TLKIDENQLMYLPDSIGGLVSIEEL 304


>gi|156371180|ref|XP_001628643.1| predicted protein [Nematostella vectensis]
 gi|156215625|gb|EDO36580.1| predicted protein [Nematostella vectensis]
          Length = 348

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 163/355 (45%), Gaps = 34/355 (9%)

Query: 49  NDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLI 107
           N    KP+++    L + NL+  P      T+L+S+DL NN++ +LP+       L  L 
Sbjct: 8   NACKGKPKSLS---LCNKNLTSVPHIIGTITSLKSVDLKNNKLVNLPREFAALNQLEGLN 64

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF-PIQILDIPTLKYLYLGNNSLNHVPR 166
             NN L  + LP+ +  L++L+  +L  N L+   PI +  +  L +L L  N L  +P 
Sbjct: 65  LGNNRL--QELPEVLCFLESLQKLHLFKNLLQDLNPIVLSGLQKLTFLNLNGNRLVSLPG 122

Query: 167 EINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLH 226
           EIN+L  L  LSL GN L  +P     L  L     +DNQ+ SLP  I+ L+ L  L + 
Sbjct: 123 EINRLVSLQFLSLDGNQLKSLPTEICHLINLTEFHAADNQITSLPEDIAFLRNLSKLFVQ 182

Query: 227 NNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV--IRF 284
            N +  LP  +   KC   +L +L +  N+LR  P E+  L  L EL   +N L+  I  
Sbjct: 183 KNYIEELPEGLA--KC--TRLSTLDISANRLRIFPAELSHLP-LKELYCEENNLLRHIPV 237

Query: 285 VSDMTYKPPSLLELASRTL------KVHEIDYSQEHLP--QNLVQYLESAHHCVNPKCKG 336
            S    +  SL EL +R +          I  +  H P  Q ++QY   A  C    C  
Sbjct: 238 HSQQEDEVLSLKELTARCVLKGLKDGRSYIRRTIRHYPKIQEMLQY---ASECA--VCGE 292

Query: 337 VFFDNRIEHIKFVDFCGKYR-------IPLLQYLCSSRCITNSPNVMYGDVKNED 384
            F +  +E + FVD     +       IP+   LCS +C  +  +  +G  +  D
Sbjct: 293 SFLNTWLECVHFVDARKTLKTKTNTRIIPVRGLLCSYKCFNSEGHDYFGIAQVGD 347


>gi|348555822|ref|XP_003463722.1| PREDICTED: protein scribble homolog isoform 2 [Cavia porcellus]
          Length = 1629

 Score =  101 bits (252), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 72/223 (32%), Positives = 113/223 (50%), Gaps = 10/223 (4%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF- 101
           ++ +P   Y +   +++ LLL  N L   P    +  NLR L LS+N I  LP  + NF 
Sbjct: 24  LQAVPEEIY-RYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 102 PLSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
            L  L ++RN++     +P+ +   K+L++ + SGN L + P     + +L +L L + S
Sbjct: 83  QLVELDVSRNDI---PEIPESIKFCKSLEIADFSGNPLSRLPDGFTQLRSLAHLALNDVS 139

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P ++  L  L  L L  N L  +P +   L +LE L L  N LE LP ++  L  L
Sbjct: 140 LQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNL 199

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTE 263
           + L L  N+L  LP E+  L+    +L  L +  N+L  LP E
Sbjct: 200 RELWLDRNQLSALPPELGNLR----RLVCLDVSENRLEELPVE 238



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 77/225 (34%), Positives = 113/225 (50%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ TL L  N L   P + S    L  LDL  N +  LP  +   P L  L    N L+A
Sbjct: 152 NLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSA 211

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP ++ NL+ L   ++S N+LE+ P+++  +  L  L L  N L  +P  I +L +L 
Sbjct: 212 --LPPELGNLRRLVCLDVSENRLEELPVELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N L ++ +  GD   L  LIL++N L +LP S+  L  L +L +  N L  LP 
Sbjct: 270 ILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI    C++  L  L L +N+L TLP E+     L  L +  N L
Sbjct: 330 EI--GGCVA--LSVLSLRDNRLATLPPELAHTAELHVLDVAGNRL 370



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 97/358 (27%), Positives = 144/358 (40%), Gaps = 90/358 (25%)

Query: 29  FSYSSLDSETL--ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           + YS    E L  A Q+  LP   +  +  N+  L L  N +   P   + F  L  LD+
Sbjct: 32  YRYSRSLEELLLDANQLRELPKPFF--RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDV 89

Query: 87  SNNRITHLPQAI-----------TNFPLSTL------------IARNNLLTAESLPKDMS 123
           S N I  +P++I           +  PLS L            +A N++ + ++LP D+ 
Sbjct: 90  SRNDIPEIPESIKFCKSLEIADFSGNPLSRLPDGFTQLRSLAHLALNDV-SLQALPGDVG 148

Query: 124 NLKN-----------------------LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
           NL N                       L+  +L GN LE  P  +  +P L+ L+L  N 
Sbjct: 149 NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQ 208

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTD-----------------------IPDTFGDLYQL 197
           L+ +P E+  L +L  L +  N L +                       +PD  G L QL
Sbjct: 209 LSALPPELGNLRRLVCLDVSENRLEELPVELGGLVLLTDLLLSQNLLQRLPDGIGQLKQL 268

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
             L +  N+L  +  +I + + L  L+L  N L  LP  +  L     KL +L +  N L
Sbjct: 269 SILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLT----KLTNLNVDRNHL 324

Query: 258 RTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHL 315
             LP EI     LS LSLRDN L           PP L    + T ++H +D +   L
Sbjct: 325 EVLPPEIGGCVALSVLSLRDNRLATL--------PPEL----AHTAELHVLDVAGNRL 370



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 99/204 (48%), Gaps = 10/204 (4%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ S+D  +  +  +P+ I  +   L  L+   N L    LPK    L NL+   LS N+
Sbjct: 13  HVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQL--RELPKPFFRLLNLRKLGLSDNE 70

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK-LHVLSLGGNSLTDIPDTFGDLYQ 196
           +++ P ++ +   L  L +  N +  +P  I K CK L +    GN L+ +PD F  L  
Sbjct: 71  IQRLPPEVANFMQLVELDVSRNDIPEIPESI-KFCKSLEIADFSGNPLSRLPDGFTQLRS 129

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
           L  L L+D  L++LP  + NL  L +L L  N L++LP  +  L     KL+ L L  N 
Sbjct: 130 LAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV----KLEQLDLGGND 185

Query: 257 LRTLPTEIITLKCLSELSLRDNPL 280
           L  LP  +  L  L EL L  N L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQL 209



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 70/219 (31%), Positives = 102/219 (46%), Gaps = 10/219 (4%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLP-QAITNF 101
           +E+LP  D      N+  L L  N LS  P        L  LD+S NR+  LP +     
Sbjct: 186 LEVLP--DTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLV 243

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L+ L+   NLL  + LP  +  LK L +  +  N+L +    I D   L  L L  N L
Sbjct: 244 LLTDLLLSQNLL--QRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLL 301

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +PR + KL KL  L++  N L  +P   G    L  L L DN+L +LP  +++   L 
Sbjct: 302 TALPRSLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSVLSLRDNRLATLPPELAHTAELH 361

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L +  N+LR+LP  +  L      LK+L L  N+ + +
Sbjct: 362 VLDVAGNRLRSLPFALTHL-----NLKALWLAENQAQPM 395


>gi|348555820|ref|XP_003463721.1| PREDICTED: protein scribble homolog isoform 1 [Cavia porcellus]
          Length = 1653

 Score =  101 bits (252), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 72/223 (32%), Positives = 113/223 (50%), Gaps = 10/223 (4%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF- 101
           ++ +P   Y +   +++ LLL  N L   P    +  NLR L LS+N I  LP  + NF 
Sbjct: 24  LQAVPEEIY-RYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 102 PLSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
            L  L ++RN++     +P+ +   K+L++ + SGN L + P     + +L +L L + S
Sbjct: 83  QLVELDVSRNDI---PEIPESIKFCKSLEIADFSGNPLSRLPDGFTQLRSLAHLALNDVS 139

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P ++  L  L  L L  N L  +P +   L +LE L L  N LE LP ++  L  L
Sbjct: 140 LQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNL 199

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTE 263
           + L L  N+L  LP E+  L+    +L  L +  N+L  LP E
Sbjct: 200 RELWLDRNQLSALPPELGNLR----RLVCLDVSENRLEELPVE 238



 Score = 99.4 bits (246), Expect = 3e-18,   Method: Composition-based stats.
 Identities = 77/225 (34%), Positives = 113/225 (50%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ TL L  N L   P + S    L  LDL  N +  LP  +   P L  L    N L+A
Sbjct: 152 NLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSA 211

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP ++ NL+ L   ++S N+LE+ P+++  +  L  L L  N L  +P  I +L +L 
Sbjct: 212 --LPPELGNLRRLVCLDVSENRLEELPVELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N L ++ +  GD   L  LIL++N L +LP S+  L  L +L +  N L  LP 
Sbjct: 270 ILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI    C++  L  L L +N+L TLP E+     L  L +  N L
Sbjct: 330 EI--GGCVA--LSVLSLRDNRLATLPPELAHTAELHVLDVAGNRL 370



 Score = 87.8 bits (216), Expect = 9e-15,   Method: Composition-based stats.
 Identities = 97/358 (27%), Positives = 144/358 (40%), Gaps = 90/358 (25%)

Query: 29  FSYSSLDSETL--ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           + YS    E L  A Q+  LP   +  +  N+  L L  N +   P   + F  L  LD+
Sbjct: 32  YRYSRSLEELLLDANQLRELPKPFF--RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDV 89

Query: 87  SNNRITHLPQAI-----------TNFPLSTL------------IARNNLLTAESLPKDMS 123
           S N I  +P++I           +  PLS L            +A N++ + ++LP D+ 
Sbjct: 90  SRNDIPEIPESIKFCKSLEIADFSGNPLSRLPDGFTQLRSLAHLALNDV-SLQALPGDVG 148

Query: 124 NLKN-----------------------LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
           NL N                       L+  +L GN LE  P  +  +P L+ L+L  N 
Sbjct: 149 NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQ 208

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTD-----------------------IPDTFGDLYQL 197
           L+ +P E+  L +L  L +  N L +                       +PD  G L QL
Sbjct: 209 LSALPPELGNLRRLVCLDVSENRLEELPVELGGLVLLTDLLLSQNLLQRLPDGIGQLKQL 268

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
             L +  N+L  +  +I + + L  L+L  N L  LP  +  L     KL +L +  N L
Sbjct: 269 SILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPRSLGKLT----KLTNLNVDRNHL 324

Query: 258 RTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHL 315
             LP EI     LS LSLRDN L           PP L    + T ++H +D +   L
Sbjct: 325 EVLPPEIGGCVALSVLSLRDNRLATL--------PPEL----AHTAELHVLDVAGNRL 370



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 99/204 (48%), Gaps = 10/204 (4%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ S+D  +  +  +P+ I  +   L  L+   N L    LPK    L NL+   LS N+
Sbjct: 13  HVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQL--RELPKPFFRLLNLRKLGLSDNE 70

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK-LHVLSLGGNSLTDIPDTFGDLYQ 196
           +++ P ++ +   L  L +  N +  +P  I K CK L +    GN L+ +PD F  L  
Sbjct: 71  IQRLPPEVANFMQLVELDVSRNDIPEIPESI-KFCKSLEIADFSGNPLSRLPDGFTQLRS 129

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
           L  L L+D  L++LP  + NL  L +L L  N L++LP  +  L     KL+ L L  N 
Sbjct: 130 LAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV----KLEQLDLGGND 185

Query: 257 LRTLPTEIITLKCLSELSLRDNPL 280
           L  LP  +  L  L EL L  N L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQL 209



 Score = 84.0 bits (206), Expect = 1e-13,   Method: Composition-based stats.
 Identities = 70/219 (31%), Positives = 102/219 (46%), Gaps = 10/219 (4%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLP-QAITNF 101
           +E+LP  D      N+  L L  N LS  P        L  LD+S NR+  LP +     
Sbjct: 186 LEVLP--DTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPVELGGLV 243

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L+ L+   NLL  + LP  +  LK L +  +  N+L +    I D   L  L L  N L
Sbjct: 244 LLTDLLLSQNLL--QRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLL 301

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +PR + KL KL  L++  N L  +P   G    L  L L DN+L +LP  +++   L 
Sbjct: 302 TALPRSLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSVLSLRDNRLATLPPELAHTAELH 361

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L +  N+LR+LP  +  L      LK+L L  N+ + +
Sbjct: 362 VLDVAGNRLRSLPFALTHL-----NLKALWLAENQAQPM 395


>gi|313220970|emb|CBY31803.1| unnamed protein product [Oikopleura dioica]
          Length = 1092

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 125/260 (48%), Gaps = 16/260 (6%)

Query: 19  FKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKF 78
           FK V++K L+ S + L +  L  +I  L           +  L L  N+L   P+N    
Sbjct: 60  FKLVNLKKLNLSDNDLSN--LGQEISQL---------SKLVELDLSRNDLGRIPENIKML 108

Query: 79  TNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
             L S+D S N +T +P+ + N   S    + N ++ E  P++  +LK L+      N +
Sbjct: 109 ALLESVDFSANPMTRIPETMVNL-ASLKHLKINAISLERFPENFGDLKTLETLEARENMV 167

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
              P  I ++P L+YL LG N +  +P +  KL  L  L +  N LT +P++ G L  L 
Sbjct: 168 MTLPETICELPNLQYLDLGENEITKLPEKFGKLSNLLELWMDDNDLTSLPESIGGLVNLT 227

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
               + N+LE +P SISN   +  L L  N L  LP  I +LK LSE    L + NNKL 
Sbjct: 228 LADFTKNKLEQIPDSISNCVNISVLTLKENYLSYLPHSIGSLKKLSE----LTVDNNKLC 283

Query: 259 TLPTEIITLKCLSELSLRDN 278
            L   I     L+EL L +N
Sbjct: 284 ELTESIGQCVALTELILTEN 303



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 153/329 (46%), Gaps = 54/329 (16%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI----ARNNL 112
           +++ LLL  NN+   P    K  NL+ L+LS+N +++L Q I+   LS L+    +RN+L
Sbjct: 41  SLEELLLGSNNIKELPKQFFKLVNLKKLNLSDNDLSNLGQEISQ--LSKLVELDLSRNDL 98

Query: 113 -----------------LTAESL---PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                             +A  +   P+ M NL +LK   ++   LE+FP    D+ TL+
Sbjct: 99  GRIPENIKMLALLESVDFSANPMTRIPETMVNLASLKHLKINAISLERFPENFGDLKTLE 158

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            L    N +  +P  I +L  L  L LG N +T +P+ FG L  L  L + DN L SLP 
Sbjct: 159 TLEARENMVMTLPETICELPNLQYLDLGENEITKLPEKFGKLSNLLELWMDDNDLTSLPE 218

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSE 272
           SI  L  L       NKL  +P  I    C++  +  L L  N L  LP  I +LK LSE
Sbjct: 219 SIGGLVNLTLADFTKNKLEQIPDSISN--CVN--ISVLTLKENYLSYLPHSIGSLKKLSE 274

Query: 273 LSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNP 332
           L++ +N L              L E   + + + E+      L +NL+Q L  +  C+  
Sbjct: 275 LTVDNNKLC------------ELTESIGQCVALTEL-----ILTENLIQVLPESVACL-- 315

Query: 333 KCK-GV--FFDNRIEHI-KFVDFCGKYRI 357
            C+ GV     NRI H+ + +  C   R+
Sbjct: 316 -CRLGVLNLGRNRITHLPEKIGKCKALRM 343



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 125/260 (48%), Gaps = 17/260 (6%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A  +E  P N  + K   ++TL    N +   P+   +  NL+ LDL  N IT LP+   
Sbjct: 141 AISLERFPENFGDLK--TLETLEARENMVMTLPETICELPNLQYLDLGENEITKLPEKFG 198

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L  L   +N LT  SLP+ +  L NL + + + N+LEQ P  I +   +  L L  
Sbjct: 199 KLSNLLELWMDDNDLT--SLPESIGGLVNLTLADFTKNKLEQIPDSISNCVNISVLTLKE 256

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L+++P  I  L KL  L++  N L ++ ++ G    L  LIL++N ++ LP S++ L 
Sbjct: 257 NYLSYLPHSIGSLKKLSELTVDNNKLCELTESIGQCVALTELILTENLIQVLPESVACLC 316

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L  L L  N++  LP +I   K     L+ L L  N L  +P  I  LK L  L +  N
Sbjct: 317 RLGVLNLGRNRITHLPEKIGKCKA----LRMLFLRENHLERIPETIGDLKNLQTLDVAGN 372

Query: 279 PLVIRFVSDMTYKPPSLLEL 298
            L         Y P SLL+L
Sbjct: 373 RL--------DYLPDSLLQL 384


>gi|124009256|ref|ZP_01693936.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
 gi|123985138|gb|EAY25077.1| leucine-rich repeat containing protein [Microscilla marina ATCC
           23134]
          Length = 306

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 77/202 (38%), Positives = 110/202 (54%), Gaps = 7/202 (3%)

Query: 78  FTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGN 136
           + N  +L L+N+++T LP  I     L TL  R N LT  +LPK++  LK L++ +L  N
Sbjct: 61  YLNQATLCLNNHKLTQLPTEIGLLRNLQTLELRQNKLT--TLPKEIMQLKALQILDLYDN 118

Query: 137 QLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQ 196
           Q+   P  I  + +L  L L  N L  +P EI +L  L  L L  N L  +P++ G L+ 
Sbjct: 119 QIAHLPASIGALHSLHKLDLYKNGLQALPYEIGQLASLTTLWLNENKLKALPESIGQLHH 178

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
           L+ L +  N+L  LP +I NL  L+ L L  NKL +LP  I  L+ L E    L L +N+
Sbjct: 179 LQELDIHKNELSVLPEAIGNLTNLQVLDLRQNKLTSLPATIGQLQNLRE----LHLSSNR 234

Query: 257 LRTLPTEIITLKCLSELSLRDN 278
           L TLP +I  L+ L  L + DN
Sbjct: 235 LTTLPPQIGELQGLWVLGIADN 256



 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 75/226 (33%), Positives = 120/226 (53%), Gaps = 7/226 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N  TL L ++ L+  P       NL++L+L  N++T LP+ I     L  L   +N +  
Sbjct: 63  NQATLCLNNHKLTQLPTEIGLLRNLQTLELRQNKLTTLPKEIMQLKALQILDLYDNQIA- 121

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP  +  L +L   +L  N L+  P +I  + +L  L+L  N L  +P  I +L  L 
Sbjct: 122 -HLPASIGALHSLHKLDLYKNGLQALPYEIGQLASLTTLWLNENKLKALPESIGQLHHLQ 180

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L +  N L+ +P+  G+L  L+ L L  N+L SLPA+I  L+ L+ L L +N+L TLP 
Sbjct: 181 ELDIHKNELSVLPEAIGNLTNLQVLDLRQNKLTSLPATIGQLQNLRELHLSSNRLTTLPP 240

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +I  L    + L  L + +N++ +LP EI  L+ L +L + +NP+ 
Sbjct: 241 QIGEL----QGLWVLGIADNRISSLPEEIRQLQSLQKLYICNNPVA 282



 Score = 71.6 bits (174), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 53/129 (41%), Positives = 66/129 (51%), Gaps = 4/129 (3%)

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           L L N+ L  +P EI  L  L  L L  N LT +P     L  L+ L L DNQ+  LPAS
Sbjct: 67  LCLNNHKLTQLPTEIGLLRNLQTLELRQNKLTTLPKEIMQLKALQILDLYDNQIAHLPAS 126

Query: 214 ISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
           I  L  L  L L+ N L+ LP EI  L  L+    +L L+ NKL+ LP  I  L  L EL
Sbjct: 127 IGALHSLHKLDLYKNGLQALPYEIGQLASLT----TLWLNENKLKALPESIGQLHHLQEL 182

Query: 274 SLRDNPLVI 282
            +  N L +
Sbjct: 183 DIHKNELSV 191



 Score = 44.7 bits (104), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 4/78 (5%)

Query: 204 DNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTE 263
           D QL+ + A+        +L L+N+KL  LPTEI  L+     L++L L  NKL TLP E
Sbjct: 48  DKQLQKIEAAHLAYLNQATLCLNNHKLTQLPTEIGLLR----NLQTLELRQNKLTTLPKE 103

Query: 264 IITLKCLSELSLRDNPLV 281
           I+ LK L  L L DN + 
Sbjct: 104 IMQLKALQILDLYDNQIA 121


>gi|440801654|gb|ELR22663.1| leucine rich repeat domain containing protein [Acanthamoeba
           castellanii str. Neff]
          Length = 936

 Score =  101 bits (252), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 92/315 (29%), Positives = 142/315 (45%), Gaps = 52/315 (16%)

Query: 22  VSIKTLDFSYSSLDS-----ETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNAS 76
           VS++ LD S+++L +     ETL +   L  NN                N L+  P +  
Sbjct: 311 VSLQELDVSFNTLQALPEGLETLTSLRRLWANN----------------NELTSLPASIR 354

Query: 77  KFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSG 135
               L  L +++NRIT LP  I     LS L A  N ++   L  D+SNL++L    L  
Sbjct: 355 GLVGLSELSVTSNRITELPSEIAQLSCLSRLSASANFIS--ELNVDLSNLQHLWCLELGH 412

Query: 136 NQLEQFPIQILDIPT-----------------------LKYLYLGNNSLNHVPREINKLC 172
           N L +FP+ + + P                        L+ LYL  N + H+P ++ ++ 
Sbjct: 413 NNLMEFPVSVFEAPGLLQLNLFGNGLSVVPDDIGRLTKLQRLYLSCNKIEHLPEQMKEMV 472

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L  L +G NS T+ P    +L  L  L L+++    +P  IS L  L+ L ++ N+++ 
Sbjct: 473 ALKDLYIGSNSFTEFPPVVFELTTLRELSLANSNFSVVPPHISKLAGLEVLHMNGNEIKE 532

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKP 292
           LP EI  L      LK L L +N L  LP E   L+ L+EL +  N L    V   +++ 
Sbjct: 533 LPAEIGALI----NLKELDLSHNCLAALPAEFTALRRLAELDISHNELTSLPVGIKSFQQ 588

Query: 293 PSLLELA-SRTLKVH 306
              L+L  +R  K H
Sbjct: 589 ICQLKLGHNRLAKSH 603



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 81/225 (36%), Positives = 110/225 (48%), Gaps = 10/225 (4%)

Query: 59  DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTL--IARNNLLTAE 116
           D L L + NL+  P +      L  L L++N I  LP  I N    T+  +  N L   +
Sbjct: 40  DRLDLKNQNLTDLPKDF-IIEELTWLSLNHNAIESLPPEIANLTRLTIFRLFGNKL---K 95

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           SLP ++  L +L   +L  N L   P QI D+  LK L++  N L  VP E+ KL  LH 
Sbjct: 96  SLPPEIGALAHLTTLDLGKNLLSSLPPQIGDLSLLKELHVHWNRLEEVPPEVGKLTALHT 155

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+L  N LT +PD    L  LE L ++ N   +LPA I+    L +L L  N  +++  E
Sbjct: 156 LNLYINRLTTLPDELQSLTALENLDIAHNAFSTLPAVIAQFSSLTNLKLVGNDFKSIGNE 215

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +    C    L+ L L  N L TLP EI  L  L  L LR+N L 
Sbjct: 216 LSHAVC----LQKLDLRCNFLTTLPPEIGNLTALRHLLLRNNCLT 256



 Score = 70.9 bits (172), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 68/266 (25%), Positives = 110/266 (41%), Gaps = 53/266 (19%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNL 125
           N L++ P   ++ +NLR+LD   N+I+ LP                         D+  L
Sbjct: 276 NKLTWVPPEITRLSNLRNLDFWENQISELP-------------------------DLGGL 310

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
            +L+  ++S N L+  P  +  + +L+ L+  NN L  +P  I  L  L  LS+  N +T
Sbjct: 311 VSLQELDVSFNTLQALPEGLETLTSLRRLWANNNELTSLPASIRGLVGLSELSVTSNRIT 370

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
           ++P     L  L  L  S N +  L   +SNL+ L  L L +N L   P  +     L +
Sbjct: 371 ELPSEIAQLSCLSRLSASANFISELNVDLSNLQHLWCLELGHNNLMEFPVSVFEAPGLLQ 430

Query: 246 -------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVS 286
                              KL+ L L  NK+  LP ++  +  L +L +  N        
Sbjct: 431 LNLFGNGLSVVPDDIGRLTKLQRLYLSCNKIEHLPEQMKEMVALKDLYIGSN-------- 482

Query: 287 DMTYKPPSLLELAS-RTLKVHEIDYS 311
             T  PP + EL + R L +   ++S
Sbjct: 483 SFTEFPPVVFELTTLRELSLANSNFS 508



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 79/264 (29%), Positives = 112/264 (42%), Gaps = 44/264 (16%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           ++ TL L  N LS  P      + L+ L +  NR+  +P  +     L TL    N LT 
Sbjct: 106 HLTTLDLGKNLLSSLPPQIGDLSLLKELHVHWNRLEEVPPEVGKLTALHTLNLYINRLT- 164

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +LP ++ +L  L+  +++ N     P  I    +L  L L  N    +  E++    L 
Sbjct: 165 -TLPDELQSLTALENLDIAHNAFSTLPAVIAQFSSLTNLKLVGNDFKSIGNELSHAVCLQ 223

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +P   G+L  L  L+L +N L SLPA + NL  L  L L NNKL  +P 
Sbjct: 224 KLDLRCNFLTTLPPEIGNLTALRHLLLRNNCLTSLPAELGNLSELLELSLGNNKLTWVPP 283

Query: 236 EII-----------------------------------TLKCLSEKLKS------LLLHN 254
           EI                                    TL+ L E L++      L  +N
Sbjct: 284 EITRLSNLRNLDFWENQISELPDLGGLVSLQELDVSFNTLQALPEGLETLTSLRRLWANN 343

Query: 255 NKLRTLPTEIITLKCLSELSLRDN 278
           N+L +LP  I  L  LSELS+  N
Sbjct: 344 NELTSLPASIRGLVGLSELSVTSN 367


>gi|359072215|ref|XP_003586928.1| PREDICTED: protein scribble homolog isoform 2 [Bos taurus]
          Length = 1606

 Score =  101 bits (251), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 72/223 (32%), Positives = 112/223 (50%), Gaps = 10/223 (4%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF- 101
           ++ +P   Y +   +++ LLL  N L   P    +  NLR L LS+N I  LP  + NF 
Sbjct: 24  LQAVPEEIY-RYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 102 PLSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
            L  L ++RN++     +P+ +   K L++ + SGN L + P     + +L +L L + S
Sbjct: 83  QLVELDVSRNDI---PEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVS 139

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P ++  L  L  L L  N L  +P +   L +LE L L  N LE LP ++  L  L
Sbjct: 140 LQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNL 199

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTE 263
           + L L  N+L  LP E+  L+    +L  L +  N+L  LP E
Sbjct: 200 RELWLDRNQLSALPPELGNLR----RLVCLDVSENRLEELPAE 238



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 100/354 (28%), Positives = 144/354 (40%), Gaps = 82/354 (23%)

Query: 29  FSYSSLDSETL--ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           + YS    E L  A Q+  LP   +  +  N+  L L  N +   P   + F  L  LD+
Sbjct: 32  YRYSRSLEELLLDANQLRELPKPFF--RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDV 89

Query: 87  SNNRITHLPQAI-----------TNFPLSTL------------IARNNLLTAESLPKDMS 123
           S N I  +P++I           +  PLS L            +A N++ + ++LP D+ 
Sbjct: 90  SRNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDV-SLQALPGDVG 148

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           NL NL    L  N L+  P  +  +  L+ L LG N L  +P  +  L  L  L L  N 
Sbjct: 149 NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQ 208

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPAS-----------------------ISNLKML 220
           L+ +P   G+L +L  L +S+N+LE LPA                        I  LK L
Sbjct: 209 LSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQL 268

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSE-------------------KLKSLLLHNNKLRTLP 261
             L +  N+L  +   I   + LSE                   KL +L +  N L  LP
Sbjct: 269 SILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEALP 328

Query: 262 TEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHL 315
            EI     LS LSLRDN L +         PP L    + T ++H +D +   L
Sbjct: 329 PEIGGCVALSVLSLRDNRLAVL--------PPEL----AHTAELHVLDVAGNRL 370



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 10/204 (4%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ S+D  +  +  +P+ I  +   L  L+   N L    LPK    L NL+   LS N+
Sbjct: 13  HVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQL--RELPKPFFRLLNLRKLGLSDNE 70

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK-LHVLSLGGNSLTDIPDTFGDLYQ 196
           +++ P ++ +   L  L +  N +  +P  I K CK L +    GN L+ +P+ F  L  
Sbjct: 71  IQRLPPEVANFMQLVELDVSRNDIPEIPESI-KFCKALEIADFSGNPLSRLPEGFTQLRS 129

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
           L  L L+D  L++LP  + NL  L +L L  N L++LP  +  L     KL+ L L  N 
Sbjct: 130 LAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV----KLEQLDLGGND 185

Query: 257 LRTLPTEIITLKCLSELSLRDNPL 280
           L  LP  +  L  L EL L  N L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQL 209



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 68/219 (31%), Positives = 100/219 (45%), Gaps = 10/219 (4%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLP-QAITNF 101
           +E+LP  D      N+  L L  N LS  P        L  LD+S NR+  LP +     
Sbjct: 186 LEVLP--DTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLV 243

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L+ L+   NLL  + LP  +  LK L +  +  N+L +    I D   L  L L  N L
Sbjct: 244 LLTDLLLSQNLL--QRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLL 301

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +P  + KL KL  L++  N L  +P   G    L  L L DN+L  LP  +++   L 
Sbjct: 302 TALPHSLGKLTKLTNLNVDRNHLEALPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELH 361

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L +  N+L++LP  +  L      LK+L L  N+ + +
Sbjct: 362 VLDVAGNRLQSLPFALTHL-----NLKALWLAENQAQPM 395


>gi|307153650|ref|YP_003889034.1| small GTP-binding protein [Cyanothece sp. PCC 7822]
 gi|306983878|gb|ADN15759.1| small GTP-binding protein [Cyanothece sp. PCC 7822]
          Length = 857

 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/183 (39%), Positives = 102/183 (55%), Gaps = 3/183 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           E ++ L L +N+L+  P++ ++  NL  LDL NN +T LP++IT    L+ L   +N LT
Sbjct: 48  EWLEVLTLNYNHLTSVPESITRLVNLTELDLRNNGLTTLPESITCLVNLTRLYLSSNGLT 107

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP+ ++ L NL V  LS N L   P  I  +  L  L L +N L  +P  I +L  L
Sbjct: 108 --TLPESITRLVNLTVLGLSSNGLTTLPESITRLVNLTVLGLSSNGLTTLPESITRLVNL 165

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
            VL L  N LT +P++   L  L  L LS N+L +LP SI+ L  LK L L NN L T P
Sbjct: 166 TVLGLSNNGLTILPESITRLVNLRELDLSYNRLTTLPESITRLVNLKELDLRNNPLETPP 225

Query: 235 TEI 237
            E+
Sbjct: 226 LEV 228



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 82/213 (38%), Positives = 104/213 (48%), Gaps = 14/213 (6%)

Query: 76  SKFTNLRSLDLSNN-------RITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKN 127
           +K   L  LDLS N       ++T +P+ +     L  L    N LT  S+P+ ++ L N
Sbjct: 15  AKELRLTQLDLSLNWTARDEDKLTKIPEEVFELEWLEVLTLNYNHLT--SVPESITRLVN 72

Query: 128 LKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDI 187
           L   +L  N L   P  I  +  L  LYL +N L  +P  I +L  L VL L  N LT +
Sbjct: 73  LTELDLRNNGLTTLPESITCLVNLTRLYLSSNGLTTLPESITRLVNLTVLGLSSNGLTTL 132

Query: 188 PDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKL 247
           P++   L  L  L LS N L +LP SI+ L  L  L L NN L  LP  I  L  L E  
Sbjct: 133 PESITRLVNLTVLGLSSNGLTTLPESITRLVNLTVLGLSNNGLTILPESITRLVNLRE-- 190

Query: 248 KSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             L L  N+L TLP  I  L  L EL LR+NPL
Sbjct: 191 --LDLSYNRLTTLPESITRLVNLKELDLRNNPL 221



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 76/201 (37%), Positives = 102/201 (50%), Gaps = 7/201 (3%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMS 123
            + L+  P+   +   L  L L+ N +T +P++IT    L+ L  RNN LT  +LP+ ++
Sbjct: 34  EDKLTKIPEEVFELEWLEVLTLNYNHLTSVPESITRLVNLTELDLRNNGLT--TLPESIT 91

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            L NL    LS N L   P  I  +  L  L L +N L  +P  I +L  L VL L  N 
Sbjct: 92  CLVNLTRLYLSSNGLTTLPESITRLVNLTVLGLSSNGLTTLPESITRLVNLTVLGLSSNG 151

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           LT +P++   L  L  L LS+N L  LP SI+ L  L+ L L  N+L TLP  I  L   
Sbjct: 152 LTTLPESITRLVNLTVLGLSNNGLTILPESITRLVNLRELDLSYNRLTTLPESITRLV-- 209

Query: 244 SEKLKSLLLHNNKLRTLPTEI 264
              LK L L NN L T P E+
Sbjct: 210 --NLKELDLRNNPLETPPLEV 228



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 63/115 (54%), Gaps = 3/115 (2%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+  L L  N L+  P++ ++  NL  L LS+N +T LP++IT    L+ L   NN LT 
Sbjct: 118 NLTVLGLSSNGLTTLPESITRLVNLTVLGLSSNGLTTLPESITRLVNLTVLGLSNNGLTI 177

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINK 170
             LP+ ++ L NL+  +LS N+L   P  I  +  LK L L NN L   P E+ K
Sbjct: 178 --LPESITRLVNLRELDLSYNRLTTLPESITRLVNLKELDLRNNPLETPPLEVAK 230


>gi|390475905|ref|XP_002807686.2| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog
           [Callithrix jacchus]
          Length = 1471

 Score =  101 bits (251), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 86/274 (31%), Positives = 126/274 (45%), Gaps = 42/274 (15%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N LS  PD  ++  +L  L L++  +  LP  + N   L TL  R NLL  +SLP  +S 
Sbjct: 115 NPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLL--KSLPASLSF 172

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L  L+  +L GN LE  P  +  +P L+ L+L  N L+ +P E+  L +L  L +  N L
Sbjct: 173 LVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 232

Query: 185 TDIP-----------------------DTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
            ++P                       D  G L QL  L +  N+L  +  +I + + L 
Sbjct: 233 EELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS 292

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L+L  N L  LP  +  L     KL +L +  N+L  LP+EI     LS LSLRDN L 
Sbjct: 293 ELILTENLLMALPRSLGKLT----KLTNLNVDRNQLEALPSEIGGCVALSVLSLRDNRLA 348

Query: 282 IRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHL 315
           +         PP L    + T ++H +D +   L
Sbjct: 349 VL--------PPEL----AHTSELHVLDVAGNRL 370



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Composition-based stats.
 Identities = 76/225 (33%), Positives = 113/225 (50%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ TL L  N L   P + S    L  LDL  N +  LP  +   P L  L    N L+A
Sbjct: 152 NLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSA 211

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP ++ NL+ L   ++S N+LE+ P ++  +  L  L L  N L  +P  I +L +L 
Sbjct: 212 --LPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N L ++ +  GD   L  LIL++N L +LP S+  L  L +L +  N+L  LP+
Sbjct: 270 ILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNQLEALPS 329

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI    C++  L  L L +N+L  LP E+     L  L +  N L
Sbjct: 330 EI--GGCVA--LSVLSLRDNRLAVLPPELAHTSELHVLDVAGNRL 370



 Score = 82.4 bits (202), Expect = 4e-13,   Method: Composition-based stats.
 Identities = 69/219 (31%), Positives = 101/219 (46%), Gaps = 10/219 (4%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLP-QAITNF 101
           +E+LP  D      N+  L L  N LS  P        L  LD+S NR+  LP +     
Sbjct: 186 LEVLP--DTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLV 243

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L+ L+   NLL  + LP  +  LK L +  +  N+L +    I D   L  L L  N L
Sbjct: 244 LLTDLLLSQNLL--QRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLL 301

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +PR + KL KL  L++  N L  +P   G    L  L L DN+L  LP  +++   L 
Sbjct: 302 MALPRSLGKLTKLTNLNVDRNQLEALPSEIGGCVALSVLSLRDNRLAVLPPELAHTSELH 361

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L +  N+L++LP  +  L      LK+L L  N+ + +
Sbjct: 362 VLDVAGNRLQSLPFALTHL-----NLKALWLAENQAQPM 395


>gi|359072211|ref|XP_003586927.1| PREDICTED: protein scribble homolog isoform 1 [Bos taurus]
          Length = 1631

 Score =  101 bits (251), Expect = 6e-19,   Method: Composition-based stats.
 Identities = 72/223 (32%), Positives = 112/223 (50%), Gaps = 10/223 (4%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF- 101
           ++ +P   Y +   +++ LLL  N L   P    +  NLR L LS+N I  LP  + NF 
Sbjct: 24  LQAVPEEIY-RYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 102 PLSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
            L  L ++RN++     +P+ +   K L++ + SGN L + P     + +L +L L + S
Sbjct: 83  QLVELDVSRNDI---PEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVS 139

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P ++  L  L  L L  N L  +P +   L +LE L L  N LE LP ++  L  L
Sbjct: 140 LQALPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNL 199

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTE 263
           + L L  N+L  LP E+  L+    +L  L +  N+L  LP E
Sbjct: 200 RELWLDRNQLSALPPELGNLR----RLVCLDVSENRLEELPAE 238



 Score = 91.7 bits (226), Expect = 6e-16,   Method: Composition-based stats.
 Identities = 100/354 (28%), Positives = 144/354 (40%), Gaps = 82/354 (23%)

Query: 29  FSYSSLDSETL--ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           + YS    E L  A Q+  LP   +  +  N+  L L  N +   P   + F  L  LD+
Sbjct: 32  YRYSRSLEELLLDANQLRELPKPFF--RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDV 89

Query: 87  SNNRITHLPQAI-----------TNFPLSTL------------IARNNLLTAESLPKDMS 123
           S N I  +P++I           +  PLS L            +A N++ + ++LP D+ 
Sbjct: 90  SRNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDV-SLQALPGDVG 148

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           NL NL    L  N L+  P  +  +  L+ L LG N L  +P  +  L  L  L L  N 
Sbjct: 149 NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQ 208

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPAS-----------------------ISNLKML 220
           L+ +P   G+L +L  L +S+N+LE LPA                        I  LK L
Sbjct: 209 LSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQL 268

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSE-------------------KLKSLLLHNNKLRTLP 261
             L +  N+L  +   I   + LSE                   KL +L +  N L  LP
Sbjct: 269 SILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEALP 328

Query: 262 TEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHL 315
            EI     LS LSLRDN L +         PP L    + T ++H +D +   L
Sbjct: 329 PEIGGCVALSVLSLRDNRLAVL--------PPEL----AHTAELHVLDVAGNRL 370



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Composition-based stats.
 Identities = 65/204 (31%), Positives = 99/204 (48%), Gaps = 10/204 (4%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ S+D  +  +  +P+ I  +   L  L+   N L    LPK    L NL+   LS N+
Sbjct: 13  HVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQL--RELPKPFFRLLNLRKLGLSDNE 70

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK-LHVLSLGGNSLTDIPDTFGDLYQ 196
           +++ P ++ +   L  L +  N +  +P  I K CK L +    GN L+ +P+ F  L  
Sbjct: 71  IQRLPPEVANFMQLVELDVSRNDIPEIPESI-KFCKALEIADFSGNPLSRLPEGFTQLRS 129

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
           L  L L+D  L++LP  + NL  L +L L  N L++LP  +  L     KL+ L L  N 
Sbjct: 130 LAHLALNDVSLQALPGDVGNLANLVTLELRENLLKSLPASLSFLV----KLEQLDLGGND 185

Query: 257 LRTLPTEIITLKCLSELSLRDNPL 280
           L  LP  +  L  L EL L  N L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQL 209



 Score = 79.7 bits (195), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 68/219 (31%), Positives = 100/219 (45%), Gaps = 10/219 (4%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLP-QAITNF 101
           +E+LP  D      N+  L L  N LS  P        L  LD+S NR+  LP +     
Sbjct: 186 LEVLP--DTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLV 243

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L+ L+   NLL  + LP  +  LK L +  +  N+L +    I D   L  L L  N L
Sbjct: 244 LLTDLLLSQNLL--QRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLL 301

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +P  + KL KL  L++  N L  +P   G    L  L L DN+L  LP  +++   L 
Sbjct: 302 TALPHSLGKLTKLTNLNVDRNHLEALPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELH 361

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L +  N+L++LP  +  L      LK+L L  N+ + +
Sbjct: 362 VLDVAGNRLQSLPFALTHL-----NLKALWLAENQAQPM 395


>gi|281341775|gb|EFB17359.1| hypothetical protein PANDA_007969 [Ailuropoda melanoleuca]
          Length = 1412

 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  +++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNMRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 135/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLD---------SETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI-ARNNLLTA----------- 115
           L+  P + +   NLR LD+S N I   P+ I N  + T++ A  N ++            
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNL 140

Query: 116 ----------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                     E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    + GN LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNVT----TLKIDENQLMYLPDSIGGLVSIEEL 304


>gi|194900450|ref|XP_001979770.1| GG16778 [Drosophila erecta]
 gi|261277885|sp|B3P3E8.1|SUR8_DROER RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|190651473|gb|EDV48728.1| GG16778 [Drosophila erecta]
          Length = 644

 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 123/228 (53%), Gaps = 10/228 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNA-SKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
            + T+ L  N  + +P    ++FTN+ S++L +NRI  +P  I +    L+ L  + N+L
Sbjct: 395 GLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENML 454

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA  LP D+    N+   NL+ N L++ P  I+++  L+ L L NN L  +P  I  L +
Sbjct: 455 TA--LPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRR 512

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N +  +P   G L++L+ LIL  NQ+  LP SI +L  L  L +  N L+ L
Sbjct: 513 LRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFL 572

Query: 234 PTEIITLKCLSEKLKSLLLHNN-KLRTLPTEIITLKCLSELSLRDNPL 280
           P EI +L    E L++L ++ N  L  LP E+   + L  L++   PL
Sbjct: 573 PEEIGSL----ESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCPL 616



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 127/268 (47%), Gaps = 24/268 (8%)

Query: 14  SDSDSFKTV------SIKTLDFSYSSLD--SETLATQIEL----LPNNDYNKKPENIDTL 61
           +D D  K +       IK LD S SS+     T+   + L    L +N   + P  I  L
Sbjct: 149 ADQDVIKALQRCRDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCL 208

Query: 62  L------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +      L  N+L+  P++    + L+ LDL +N++  +P  I     L+TL  R N +T
Sbjct: 209 VSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRIT 268

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  +  D+  L NL + +L  N++ +    I  +  L  L + +N L H+P +I     L
Sbjct: 269 A--VADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNL 326

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L DIPD+ G+L  L  L +  N+L S+PA++ N K +    +  N +  LP
Sbjct: 327 SALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLNSVPATLKNCKSMDEFNVEGNGITQLP 386

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPT 262
             +  L  LS  L ++ L  N+  + PT
Sbjct: 387 DGM--LASLS-GLTTITLSRNQFASYPT 411



 Score = 82.0 bits (201), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 71/229 (31%), Positives = 109/229 (47%), Gaps = 7/229 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           + E I  L L  ++++  P    +  +L  L L +N+I  LP  I     L  L    N 
Sbjct: 161 RDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENS 220

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  SLP+ + N   LKV +L  N+L + P  I  + +L  LYL  N +  V  ++ +L 
Sbjct: 221 LT--SLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLV 278

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L +LSL  N + ++    G L  L  L +S N LE LP  I N   L +L L +N+L  
Sbjct: 279 NLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLD 338

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +P  I  LK L      L +  N+L ++P  +   K + E ++  N + 
Sbjct: 339 IPDSIGNLKSLVR----LGMRYNRLNSVPATLKNCKSMDEFNVEGNGIT 383



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 13/165 (7%)

Query: 34  LDSETLATQIEL-LPNNDYNKKP------ENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           LD  T    +EL L  N   K P      +N++ L+L +N L   P+       LR LDL
Sbjct: 459 LDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDL 518

Query: 87  SNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI 145
             NRI  LP  I     L  LI + N +T   LP+ + +L NL   ++S N L+  P +I
Sbjct: 519 EENRIEVLPHEIGLLHELQRLILQTNQITM--LPRSIGHLGNLTHLSVSENNLQFLPEEI 576

Query: 146 LDIPTLKYLYLGNN-SLNHVPREINKLCK-LHVLSLGGNSLTDIP 188
             + +L+ LY+  N  L  +P E+  LC+ L  L++    L+ IP
Sbjct: 577 GSLESLENLYINQNPGLEKLPFEL-ALCQNLKYLNIDKCPLSTIP 620


>gi|158335132|ref|YP_001516304.1| hypothetical protein AM1_1973 [Acaryochloris marina MBIC11017]
 gi|158305373|gb|ABW26990.1| leucine-rich-repeat protein [Acaryochloris marina MBIC11017]
          Length = 842

 Score =  101 bits (251), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 63/149 (42%), Positives = 84/149 (56%), Gaps = 4/149 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            +P  +S LKNL+  +L GNQL   P  I  +  L+ L L  N L  +P  I++L  L  
Sbjct: 30  EIPDAISQLKNLQTLSLQGNQLTTIPDAISQLKNLQTLSLQRNQLTAIPDAISQLKNLQT 89

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           LSL GN LT IPD  G L  L+ L L DNQL ++P +IS L  L+ L L N++L T+P  
Sbjct: 90  LSLQGNQLTAIPDAIGQLVNLQTLDLHDNQLTTIPDTISQLVNLQELDLRNDQLTTIPDA 149

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEII 265
           I  L      L+ L LH N+L  +P EI+
Sbjct: 150 ISQLS----NLQKLYLHGNELLKIPAEIL 174



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 65/158 (41%), Positives = 88/158 (55%), Gaps = 3/158 (1%)

Query: 82  RSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
           RSLDLS   +T +P AI+    L TL  + N LT  ++P  +S LKNL+  +L  NQL  
Sbjct: 19  RSLDLSYLGLTEIPDAISQLKNLQTLSLQGNQLT--TIPDAISQLKNLQTLSLQRNQLTA 76

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
            P  I  +  L+ L L  N L  +P  I +L  L  L L  N LT IPDT   L  L+ L
Sbjct: 77  IPDAISQLKNLQTLSLQGNQLTAIPDAIGQLVNLQTLDLHDNQLTTIPDTISQLVNLQEL 136

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
            L ++QL ++P +IS L  L+ L LH N+L  +P EI+
Sbjct: 137 DLRNDQLTTIPDAISQLSNLQKLYLHGNELLKIPAEIL 174



 Score = 77.4 bits (189), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/153 (37%), Positives = 80/153 (52%), Gaps = 4/153 (2%)

Query: 129 KVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIP 188
           +  +LS   L + P  I  +  L+ L L  N L  +P  I++L  L  LSL  N LT IP
Sbjct: 19  RSLDLSYLGLTEIPDAISQLKNLQTLSLQGNQLTTIPDAISQLKNLQTLSLQRNQLTAIP 78

Query: 189 DTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLK 248
           D    L  L+ L L  NQL ++P +I  L  L++L LH+N+L T+P  I  L  L E   
Sbjct: 79  DAISQLKNLQTLSLQGNQLTAIPDAIGQLVNLQTLDLHDNQLTTIPDTISQLVNLQE--- 135

Query: 249 SLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L L N++L T+P  I  L  L +L L  N L+
Sbjct: 136 -LDLRNDQLTTIPDAISQLSNLQKLYLHGNELL 167



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 62/114 (54%), Gaps = 3/114 (2%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  PD  S+  NL++L L  N++T +P AI     L TL   +N LT
Sbjct: 62  KNLQTLSLQRNQLTAIPDAISQLKNLQTLSLQGNQLTAIPDAIGQLVNLQTLDLHDNQLT 121

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREI 168
             ++P  +S L NL+  +L  +QL   P  I  +  L+ LYL  N L  +P EI
Sbjct: 122 --TIPDTISQLVNLQELDLRNDQLTTIPDAISQLSNLQKLYLHGNELLKIPAEI 173



 Score = 45.8 bits (107), Expect = 0.032,   Method: Compositional matrix adjust.
 Identities = 35/86 (40%), Positives = 47/86 (54%), Gaps = 4/86 (4%)

Query: 196 QLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNN 255
           Q  +L LS   L  +P +IS LK L++L L  N+L T+P  I  LK     L++L L  N
Sbjct: 17  QSRSLDLSYLGLTEIPDAISQLKNLQTLSLQGNQLTTIPDAISQLK----NLQTLSLQRN 72

Query: 256 KLRTLPTEIITLKCLSELSLRDNPLV 281
           +L  +P  I  LK L  LSL+ N L 
Sbjct: 73  QLTAIPDAISQLKNLQTLSLQGNQLT 98



 Score = 44.7 bits (104), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 24/90 (26%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           N+ TL L+ N L+  PD  S+  NL+ LDL N+++T +P AI                  
Sbjct: 109 NLQTLDLHDNQLTTIPDTISQLVNLQELDLRNDQLTTIPDAI------------------ 150

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQIL 146
                 S L NL+   L GN+L + P +IL
Sbjct: 151 ------SQLSNLQKLYLHGNELLKIPAEIL 174


>gi|327263157|ref|XP_003216387.1| PREDICTED: protein LAP2-like isoform 1 [Anolis carolinensis]
          Length = 1363

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 112/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTL--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             M +LK+L   ++S N +E     I    +L+ L L +NSL  +P  I  L KL +L +
Sbjct: 224 GFMGSLKHLIYLDVSKNNIETLEEGISGCESLQDLLLSSNSLQQLPESIGCLKKLAILKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+S+  L  +++    +N L  LP EI  
Sbjct: 284 DENQLMYLPDSIGGLTSVEELDCSFNEIEALPSSVGQLSNIRTFAADHNFLTQLPPEIGN 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL  LP E+  ++ L  ++L DN L
Sbjct: 344 WKYVT----VLFLHSNKLEFLPEEMGDMQKLKVINLSDNRL 380



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 131/288 (45%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++  LD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTALDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI-ARNNLLTA----------- 115
           L+  P + +   NLR LD+S N I   P+ I N  +  ++ A  N ++            
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLAIVEASVNPISKLPDGFSQLLNL 140

Query: 116 ----------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                     E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    + GN LT IP   G L  L  L +S N +E+L   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDGNRLTLIPGFMGSLKHLIYLDVSKNNIETLEEGISGCESLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I  LK    KL  L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPESIGCLK----KLAILKIDENQLMYLPDSIGGLTSVEEL 304


>gi|441648556|ref|XP_004093063.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog [Nomascus
           leucogenys]
          Length = 1582

 Score =  101 bits (251), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 86/274 (31%), Positives = 125/274 (45%), Gaps = 42/274 (15%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N LS  PD  ++  +L  L L++  +  LP+ + N   L TL  R NLL  +SLP  +S 
Sbjct: 151 NPLSRLPDGFTQLRSLAHLALNDVSLQALPRDVGNLANLVTLELRENLL--KSLPASLSF 208

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L  L+  +L GN LE  P  +  +P L+ L+L  N L+ +P E+  L +L  L +  N L
Sbjct: 209 LVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRL 268

Query: 185 TDIP-----------------------DTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
            ++P                       D  G L QL  L +  N+L  +  +I + + L 
Sbjct: 269 EELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS 328

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L+L  N L  LP  +  L     KL +L +  N L  LP EI     LS LSLRDN L 
Sbjct: 329 ELILTENLLMALPRSLGKLT----KLTNLNVDRNHLEALPPEIGGCVALSVLSLRDNRLA 384

Query: 282 IRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHL 315
           +         PP L    + T ++H +D +   L
Sbjct: 385 VL--------PPEL----AHTAELHVLDVAGNRL 406



 Score = 99.0 bits (245), Expect = 4e-18,   Method: Composition-based stats.
 Identities = 79/229 (34%), Positives = 110/229 (48%), Gaps = 32/229 (13%)

Query: 77  KFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTAESLPKDMSNLKNLKVFNLS 134
           +  NLR L LS+N I  LP  + NF  L  L ++RN++     +P+ +   K L++ + S
Sbjct: 93  RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDI---PEIPESIKFCKALEIADFS 149

Query: 135 GNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC---------------------- 172
           GN L + P     + +L +L L + SL  +PR++  L                       
Sbjct: 150 GNPLSRLPDGFTQLRSLAHLALNDVSLQALPRDVGNLANLVTLELRENLLKSLPASLSFL 209

Query: 173 -KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLR 231
            KL  L LGGN L  +PDT G L  L  L L  NQL +LP  + NL+ L  L +  N+L 
Sbjct: 210 VKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLE 269

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            LP E+  L  L++ L S     N LR LP  I  LK LS L +  N L
Sbjct: 270 ELPAELGGLVLLTDLLLS----QNLLRRLPDGIGQLKQLSILKVDQNRL 314



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 76/225 (33%), Positives = 111/225 (49%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ TL L  N L   P + S    L  LDL  N +  LP  +   P L  L    N L+A
Sbjct: 188 NLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSA 247

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP ++ NL+ L   ++S N+LE+ P ++  +  L  L L  N L  +P  I +L +L 
Sbjct: 248 --LPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLS 305

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N L ++ +  GD   L  LIL++N L +LP S+  L  L +L +  N L  LP 
Sbjct: 306 ILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNHLEALPP 365

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI    C++  L  L L +N+L  LP E+     L  L +  N L
Sbjct: 366 EI--GGCVA--LSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRL 406



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 56/162 (34%), Positives = 80/162 (49%), Gaps = 6/162 (3%)

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK-LHVLS 178
           K    L NL+   LS N++++ P ++ +   L  L +  N +  +P  I K CK L +  
Sbjct: 89  KPFFRLLNLRKLGLSDNEIQRLPPEVANFMQLVELDVSRNDIPEIPESI-KFCKALEIAD 147

Query: 179 LGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII 238
             GN L+ +PD F  L  L  L L+D  L++LP  + NL  L +L L  N L++LP  + 
Sbjct: 148 FSGNPLSRLPDGFTQLRSLAHLALNDVSLQALPRDVGNLANLVTLELRENLLKSLPASLS 207

Query: 239 TLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            L     KL+ L L  N L  LP  +  L  L EL L  N L
Sbjct: 208 FLV----KLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQL 245



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Composition-based stats.
 Identities = 69/219 (31%), Positives = 100/219 (45%), Gaps = 10/219 (4%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLP-QAITNF 101
           +E+LP  D      N+  L L  N LS  P        L  LD+S NR+  LP +     
Sbjct: 222 LEVLP--DTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLV 279

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L+ L+   NLL    LP  +  LK L +  +  N+L +    I D   L  L L  N L
Sbjct: 280 LLTDLLLSQNLL--RRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLL 337

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +PR + KL KL  L++  N L  +P   G    L  L L DN+L  LP  +++   L 
Sbjct: 338 MALPRSLGKLTKLTNLNVDRNHLEALPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELH 397

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L +  N+L++LP  +  L      LK+L L  N+ + +
Sbjct: 398 VLDVAGNRLQSLPFALTHL-----NLKALWLAENQAQPM 431


>gi|301780906|ref|XP_002925869.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Ailuropoda melanoleuca]
 gi|281346252|gb|EFB21836.1| hypothetical protein PANDA_015445 [Ailuropoda melanoleuca]
          Length = 603

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 85/228 (37%), Positives = 124/228 (54%), Gaps = 9/228 (3%)

Query: 57  NIDTLLLYHNNLSFFP-DNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           N+D     + NLSF   +   + T+L  L +SNN++  L   +   P L+ L   +N LT
Sbjct: 60  NVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLT 119

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLP  +  L+NL+  N+S N+L+  P +I ++  LK LYL +N L  +P    +L  L
Sbjct: 120 --SLPSAIRELENLQKLNVSHNKLQILPEEITNLRNLKGLYLQHNELTCIPEGFEQLFNL 177

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L +  N LT +P +F  L  L  L LS NQL+SLPA IS +K LK L  ++N L  +P
Sbjct: 178 EDLDISNNRLTTVPASFSSLSSLVRLNLSSNQLKSLPAEISGMKRLKHLDCNSNLLEAVP 237

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            E+  +    E L+ L L  NKLR LP E  + + L EL + +N + I
Sbjct: 238 PELANM----ESLELLYLRRNKLRFLP-EFPSCRLLKELYVGENQIEI 280



 Score = 89.7 bits (221), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 119/227 (52%), Gaps = 10/227 (4%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLT 114
           EN+  L + HN L   P+  +   NL+ L L +N +T +P+     F L  L   NN LT
Sbjct: 129 ENLQKLNVSHNKLQILPEEITNLRNLKGLYLQHNELTCIPEGFEQLFNLEDLDISNNRLT 188

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             ++P   S+L +L   NLS NQL+  P +I  +  LK+L   +N L  VP E+  +  L
Sbjct: 189 --TVPASFSSLSSLVRLNLSSNQLKSLPAEISGMKRLKHLDCNSNLLEAVPPELANMESL 246

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL-PASISNLKMLKSLLLHNNKLRTL 233
            +L L  N L  +P+ F     L+ L + +NQ+E L P  + +L  +  L L +NKL+++
Sbjct: 247 ELLYLRRNKLRFLPE-FPSCRLLKELYVGENQIEILGPEHLKHLNSILVLDLRDNKLKSV 305

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P EI  L    + L+ L L NN + +LP  +  L  L  L+L  NPL
Sbjct: 306 PDEITLL----QSLERLDLSNNDISSLPCSLGKLH-LKFLALEGNPL 347



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 82/238 (34%), Positives = 120/238 (50%), Gaps = 37/238 (15%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           ++++LP    N +  N+  L L HN L+  P+   +  NL  LD+SNNR+T +P + ++ 
Sbjct: 140 KLQILPEEITNLR--NLKGLYLQHNELTCIPEGFEQLFNLEDLDISNNRLTTVPASFSS- 196

Query: 102 PLSTLIARNNLLTAE--SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
            LS+L+ R NL + +  SLP ++S +K LK  + + N LE  P ++ ++ +L+ LYL  N
Sbjct: 197 -LSSLV-RLNLSSNQLKSLPAEISGMKRLKHLDCNSNLLEAVPPELANMESLELLYLRRN 254

Query: 160 SLNHVPR---------------EINKLCKLH--------VLSLGGNSLTDIPDTFGDLYQ 196
            L  +P                +I  L   H        VL L  N L  +PD    L  
Sbjct: 255 KLRFLPEFPSCRLLKELYVGENQIEILGPEHLKHLNSILVLDLRDNKLKSVPDEITLLQS 314

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII------TLKCLSEKLK 248
           LE L LS+N + SLP S+  L  LK L L  N LRT+  EII       LK L  K+K
Sbjct: 315 LERLDLSNNDISSLPCSLGKLH-LKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIK 371



 Score = 62.0 bits (149), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 58/199 (29%), Positives = 99/199 (49%), Gaps = 9/199 (4%)

Query: 74  NASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE--SLPKDMSNLKNL-KV 130
           N      L+ LD S  + T +P  + +     +I   N    +   +PK +  LK +   
Sbjct: 395 NVHAIITLKILDYSGKQTTLIPDEVFDAVKGNIITSVNFSKNQLCEIPKRIVELKEMVSD 454

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NLS N+L    +++  +  L +L L NN LN +P E+  L KL  ++L  N    +P+ 
Sbjct: 455 VNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLIKLQTINLSFNRFKILPEV 514

Query: 191 FGDLYQLEALILSDNQLESL-PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
              +  LE +++S+NQ+ S+ P  +  ++ L +L L NN L  +P E+    C++  L++
Sbjct: 515 LYHIPTLETILISNNQVGSVDPQKMKAMENLITLDLQNNDLLQIPPELGN--CVN--LRT 570

Query: 250 LLLHNNKLRTLPTEIITLK 268
           LLL  N  R +P   I +K
Sbjct: 571 LLLDGNPFR-VPRAAILMK 588



 Score = 51.2 bits (121), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 77/287 (26%), Positives = 131/287 (45%), Gaps = 25/287 (8%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           QIE+L   ++ K   +I  L L  N L   PD  +   +L  LDLSNN I+ LP ++   
Sbjct: 277 QIEIL-GPEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPCSLGKL 335

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L  L    N L   ++ +++ N    +V     ++++       D P+     +G  + 
Sbjct: 336 HLKFLALEGNPL--RTIRREIINKGTQEVLKYLRSKIKD------DGPSPSDSVIG--TA 385

Query: 162 NHVPRE----INKLCKLHVLSLGGNSLTDIPDTFGDLYQ---LEALILSDNQLESLPASI 214
             +P E    ++ +  L +L   G   T IPD   D  +   + ++  S NQL  +P  I
Sbjct: 386 MTLPSESRVNVHAIITLKILDYSGKQTTLIPDEVFDAVKGNIITSVNFSKNQLCEIPKRI 445

Query: 215 SNLK-MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
             LK M+  + L  NKL  +  E+    C+ +KL  L L NN L +LP E+ +L  L  +
Sbjct: 446 VELKEMVSDVNLSFNKLSFISLEL----CMLQKLTFLDLRNNFLNSLPEEMESLIKLQTI 501

Query: 274 SLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLV 320
           +L  N    + + ++ Y  P+L  +     +V  +D  +    +NL+
Sbjct: 502 NLSFNRF--KILPEVLYHIPTLETILISNNQVGSVDPQKMKAMENLI 546



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 54/105 (51%), Gaps = 3/105 (2%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L +N L+  P+       L++++LS NR   LP+ + + P L T++  NN + +   P+ 
Sbjct: 480 LRNNFLNSLPEEMESLIKLQTINLSFNRFKILPEVLYHIPTLETILISNNQVGSVD-PQK 538

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPR 166
           M  ++NL   +L  N L Q P ++ +   L+ L L  N    VPR
Sbjct: 539 MKAMENLITLDLQNNDLLQIPPELGNCVNLRTLLLDGNPF-RVPR 582


>gi|195501949|ref|XP_002098015.1| GE24170 [Drosophila yakuba]
 gi|261277890|sp|B4PU77.1|SUR8_DROYA RecName: Full=Leucine-rich repeat protein soc-2 homolog; AltName:
           Full=Protein Sur-8 homolog; AltName: Full=Protein soc-2
           homolog
 gi|194184116|gb|EDW97727.1| GE24170 [Drosophila yakuba]
          Length = 645

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 78/228 (34%), Positives = 123/228 (53%), Gaps = 10/228 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNA-SKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
            + T+ L  N  + +P    ++FTN+ S++L +NRI  +P  I +    L+ L  + N+L
Sbjct: 396 GLTTITLSRNQFASYPTGGPAQFTNVYSINLEHNRIDKIPYGIFSRAKGLTKLNMKENML 455

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           TA  LP D+    N+   NL+ N L++ P  I+++  L+ L L NN L  +P  I  L +
Sbjct: 456 TA--LPLDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRR 513

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N +  +P   G L++L+ LIL  NQ+  LP SI +L  L  L +  N L+ L
Sbjct: 514 LRILDLEENRIEVLPHEIGLLHELQRLILQTNQITMLPRSIGHLGNLTHLSVSENNLQFL 573

Query: 234 PTEIITLKCLSEKLKSLLLHNN-KLRTLPTEIITLKCLSELSLRDNPL 280
           P EI +L    E L++L ++ N  L  LP E+   + L  L++   PL
Sbjct: 574 PEEIGSL----ESLENLYINQNPGLEKLPFELALCQNLKYLNIDKCPL 617



 Score = 83.6 bits (205), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 127/268 (47%), Gaps = 24/268 (8%)

Query: 14  SDSDSFKTV------SIKTLDFSYSSLD--SETLATQIEL----LPNNDYNKKPENIDTL 61
           +D D  K +       IK LD S SS+     T+   + L    L +N   + P  I  L
Sbjct: 150 ADQDVIKALQRCRDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCL 209

Query: 62  L------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           +      L  N+L+  P++    + L+ LDL +N++  +P  I     L+TL  R N +T
Sbjct: 210 VSLRNLALNENSLTSLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRIT 269

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
           A  +  D+  L NL + +L  N++ +    I  +  L  L + +N L H+P +I     L
Sbjct: 270 A--VADDLRQLVNLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNL 327

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N L DIPD+ G+L  L  L +  N+L S+PA++ N K +    +  N +  LP
Sbjct: 328 SALDLQHNELLDIPDSIGNLKSLVRLGMRYNRLSSVPATLKNCKSMDEFNVEGNGITQLP 387

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPT 262
             +  L  LS  L ++ L  N+  + PT
Sbjct: 388 DGM--LASLS-GLTTITLSRNQFASYPT 412



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 71/226 (31%), Positives = 108/226 (47%), Gaps = 7/226 (3%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNL 112
           + E I  L L  ++++  P    +  +L  L L +N+I  LP  I     L  L    N 
Sbjct: 162 RDEGIKRLDLSKSSITVIPSTVKECVHLTELYLYSNKIGQLPPEIGCLVSLRNLALNENS 221

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  SLP+ + N   LKV +L  N+L + P  I  + +L  LYL  N +  V  ++ +L 
Sbjct: 222 LT--SLPESLQNCSQLKVLDLRHNKLAEIPPVIYRLRSLTTLYLRFNRITAVADDLRQLV 279

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRT 232
            L +LSL  N + ++    G L  L  L +S N LE LP  I N   L +L L +N+L  
Sbjct: 280 NLTMLSLRENKIRELGSAIGALVNLTTLDVSHNHLEHLPEDIGNCVNLSALDLQHNELLD 339

Query: 233 LPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           +P  I  LK L      L +  N+L ++P  +   K + E ++  N
Sbjct: 340 IPDSIGNLKSLVR----LGMRYNRLSSVPATLKNCKSMDEFNVEGN 381



 Score = 53.9 bits (128), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 55/165 (33%), Positives = 81/165 (49%), Gaps = 13/165 (7%)

Query: 34  LDSETLATQIEL-LPNNDYNKKP------ENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           LD  T    +EL L  N   K P      +N++ L+L +N L   P+       LR LDL
Sbjct: 460 LDIGTWVNMVELNLATNALQKLPDDIMNLQNLEILILSNNMLKKIPNTIGNLRRLRILDL 519

Query: 87  SNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI 145
             NRI  LP  I     L  LI + N +T   LP+ + +L NL   ++S N L+  P +I
Sbjct: 520 EENRIEVLPHEIGLLHELQRLILQTNQITM--LPRSIGHLGNLTHLSVSENNLQFLPEEI 577

Query: 146 LDIPTLKYLYLGNN-SLNHVPREINKLCK-LHVLSLGGNSLTDIP 188
             + +L+ LY+  N  L  +P E+  LC+ L  L++    L+ IP
Sbjct: 578 GSLESLENLYINQNPGLEKLPFEL-ALCQNLKYLNIDKCPLSTIP 621


>gi|443690437|gb|ELT92575.1| hypothetical protein CAPTEDRAFT_148907, partial [Capitella teleta]
          Length = 600

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 76/225 (33%), Positives = 121/225 (53%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+++L L  N L + P + S    L++LDL +N +  LP+ I + P L  L    N L+ 
Sbjct: 153 NLESLELRENLLKYLPSSLSFLVKLKTLDLGSNVLEDLPETIGSLPSLEELWLDCNELS- 211

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP ++ NLK L   ++S N+LE+ P ++  +  L  L L  NS+ ++P  I  L KL 
Sbjct: 212 -ELPPEIGNLKRLTQIDVSENKLERLPDEMSGLLHLTDLILSQNSIEYLPEGIGNLRKLS 270

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N L  +    G+   ++ LIL++N L  +P SI  +K+L +  +  N+L  +P 
Sbjct: 271 ILKMDQNQLLHLTPAIGNCIAMQELILTENLLSDVPTSIGRMKLLANFNVDRNRLTEIPK 330

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI   +C   KL  L L +N++  LP+EI  LK L  L +  N L
Sbjct: 331 EIG--QC--SKLGVLSLRDNRVLYLPSEIGNLKELHVLDVSGNRL 371



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 82/242 (33%), Positives = 119/242 (49%), Gaps = 7/242 (2%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A QI  LP   +  +   +  L L  N ++  P +   F +L+ LD+S N IT +P+ I 
Sbjct: 46  ANQIRELPRGFF--RLAQLRKLTLSDNEIARLPPDIGNFMSLQELDISRNDITDIPENI- 102

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
            F  +  +A  +      LP   + L+NL    L+   L + P  I  +  L+ L L  N
Sbjct: 103 KFCRNLQVADFSCNPLSRLPDGFTQLRNLTHLGLNDVSLARLPPDIGSLSNLESLELREN 162

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L ++P  ++ L KL  L LG N L D+P+T G L  LE L L  N+L  LP  I NLK 
Sbjct: 163 LLKYLPSSLSFLVKLKTLDLGSNVLEDLPETIGSLPSLEELWLDCNELSELPPEIGNLKR 222

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L  + +  NKL  LP E+  L  L++    L+L  N +  LP  I  L+ LS L +  N 
Sbjct: 223 LTQIDVSENKLERLPDEMSGLLHLTD----LILSQNSIEYLPEGIGNLRKLSILKMDQNQ 278

Query: 280 LV 281
           L+
Sbjct: 279 LL 280



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 116/240 (48%), Gaps = 13/240 (5%)

Query: 49  NDYNKKPENI------DTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP 102
           ND    PENI             N LS  PD  ++  NL  L L++  +  LP  I +  
Sbjct: 93  NDITDIPENIKFCRNLQVADFSCNPLSRLPDGFTQLRNLTHLGLNDVSLARLPPDIGSLS 152

Query: 103 -LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L +L  R NLL  + LP  +S L  LK  +L  N LE  P  I  +P+L+ L+L  N L
Sbjct: 153 NLESLELRENLL--KYLPSSLSFLVKLKTLDLGSNVLEDLPETIGSLPSLEELWLDCNEL 210

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
           + +P EI  L +L  + +  N L  +PD    L  L  LILS N +E LP  I NL+ L 
Sbjct: 211 SELPPEIGNLKRLTQIDVSENKLERLPDEMSGLLHLTDLILSQNSIEYLPEGIGNLRKLS 270

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L +  N+L  L   I    C++  ++ L+L  N L  +PT I  +K L+  ++  N L 
Sbjct: 271 ILKMDQNQLLHLTPAIGN--CIA--MQELILTENLLSDVPTSIGRMKLLANFNVDRNRLT 326



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 76/240 (31%), Positives = 115/240 (47%), Gaps = 19/240 (7%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           V +KTLD   + L  E L   I  LP+         ++ L L  N LS  P        L
Sbjct: 175 VKLKTLDLGSNVL--EDLPETIGSLPS---------LEELWLDCNELSELPPEIGNLKRL 223

Query: 82  RSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
             +D+S N++  LP  ++    L+ LI   N  + E LP+ + NL+ L +  +  NQL  
Sbjct: 224 TQIDVSENKLERLPDEMSGLLHLTDLILSQN--SIEYLPEGIGNLRKLSILKMDQNQLLH 281

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
               I +   ++ L L  N L+ VP  I ++  L   ++  N LT+IP   G   +L  L
Sbjct: 282 LTPAIGNCIAMQELILTENLLSDVPTSIGRMKLLANFNVDRNRLTEIPKEIGQCSKLGVL 341

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L DN++  LP+ I NLK L  L +  N+L+ LP   IT+   S  LK+L L  N+ + +
Sbjct: 342 SLRDNRVLYLPSEIGNLKELHVLDVSGNRLQHLP---ITMG--SCNLKALWLSENQAQPM 396



 Score = 61.2 bits (147), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 100/230 (43%), Gaps = 43/230 (18%)

Query: 117 SLPKD-MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
            +P+D +  ++ L+   L  NQ+ + P     +  L+ L L +N +  +P +I     L 
Sbjct: 27  QIPEDILRYVRTLEELLLDANQIRELPRGFFRLAQLRKLTLSDNEIARLPPDIGNFMSLQ 86

Query: 176 VLSLGGNSLTDI-----------------------PDTFGDLYQLEALILSDNQLESLPA 212
            L +  N +TDI                       PD F  L  L  L L+D  L  LP 
Sbjct: 87  ELDISRNDITDIPENIKFCRNLQVADFSCNPLSRLPDGFTQLRNLTHLGLNDVSLARLPP 146

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSE 272
            I +L  L+SL L  N L+ LP+ +  L     KLK+L L +N L  LP  I +L  L E
Sbjct: 147 DIGSLSNLESLELRENLLKYLPSSLSFLV----KLKTLDLGSNVLEDLPETIGSLPSLEE 202

Query: 273 LSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQ---EHLPQNL 319
           L L  N        +++  PP +  L     ++ +ID S+   E LP  +
Sbjct: 203 LWLDCN--------ELSELPPEIGNLK----RLTQIDVSENKLERLPDEM 240


>gi|403303038|ref|XP_003942154.1| PREDICTED: protein scribble homolog [Saimiri boliviensis
           boliviensis]
          Length = 1730

 Score =  101 bits (251), Expect = 7e-19,   Method: Composition-based stats.
 Identities = 86/274 (31%), Positives = 125/274 (45%), Gaps = 42/274 (15%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N LS  PD  ++  +L  L L++  +  LP  + N   L TL  R NLL  +SLP  +S 
Sbjct: 187 NPLSRLPDGFTQLRSLAHLALNDVSLQALPGDVGNLANLVTLELRENLL--KSLPASLSF 244

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L  L+  +L GN LE  P  +  +P L+ L+L  N L+ +P E+  L +L  L +  N L
Sbjct: 245 LVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSALPPELGSLRRLVCLDVSENRL 304

Query: 185 TDIP-----------------------DTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
            ++P                       D  G L QL  L +  N+L  +  +I + + L 
Sbjct: 305 EELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLS 364

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L+L  N L  LP  +  L     KL +L +  N+L  LP EI     LS LSLRDN L 
Sbjct: 365 ELILTENLLMALPRSLGKLT----KLTNLNVDRNQLEELPPEIGGCVALSVLSLRDNRLA 420

Query: 282 IRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHL 315
           +         PP L    + T ++H +D +   L
Sbjct: 421 VL--------PPEL----AHTSELHVLDVAGNRL 442



 Score = 95.5 bits (236), Expect = 4e-17,   Method: Composition-based stats.
 Identities = 75/225 (33%), Positives = 112/225 (49%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ TL L  N L   P + S    L  LDL  N +  LP  +   P L  L    N L+A
Sbjct: 224 NLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSA 283

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP ++ +L+ L   ++S N+LE+ P ++  +  L  L L  N L  +P  I +L +L 
Sbjct: 284 --LPPELGSLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLRRLPDGIGQLKQLS 341

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N L ++ +  GD   L  LIL++N L +LP S+  L  L +L +  N+L  LP 
Sbjct: 342 ILKVDQNRLCEVTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNQLEELPP 401

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI    C++  L  L L +N+L  LP E+     L  L +  N L
Sbjct: 402 EI--GGCVA--LSVLSLRDNRLAVLPPELAHTSELHVLDVAGNRL 442



 Score = 83.2 bits (204), Expect = 2e-13,   Method: Composition-based stats.
 Identities = 73/240 (30%), Positives = 107/240 (44%), Gaps = 19/240 (7%)

Query: 22  VSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNL 81
           V ++ LD   + L  E L   +  LPN         +  L L  N LS  P        L
Sbjct: 246 VKLEQLDLGGNDL--EVLPDTLGALPN---------LRELWLDRNQLSALPPELGSLRRL 294

Query: 82  RSLDLSNNRITHLP-QAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQ 140
             LD+S NR+  LP +      L+ L+   NLL    LP  +  LK L +  +  N+L +
Sbjct: 295 VCLDVSENRLEELPAELGGLVLLTDLLLSQNLL--RRLPDGIGQLKQLSILKVDQNRLCE 352

Query: 141 FPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEAL 200
               I D   L  L L  N L  +PR + KL KL  L++  N L ++P   G    L  L
Sbjct: 353 VTEAIGDCENLSELILTENLLMALPRSLGKLTKLTNLNVDRNQLEELPPEIGGCVALSVL 412

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
            L DN+L  LP  +++   L  L +  N+L++LP  +  L      LK+L L  N+ + +
Sbjct: 413 SLRDNRLAVLPPELAHTSELHVLDVAGNRLQSLPFALTHL-----NLKALWLAENQAQPM 467


>gi|75075434|sp|Q4R3P6.1|LRC40_MACFA RecName: Full=Leucine-rich repeat-containing protein 40
 gi|67971856|dbj|BAE02270.1| unnamed protein product [Macaca fascicularis]
          Length = 602

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 122/224 (54%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFP-DNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           N+D     + NLSF   +   + T+L  L +SNN++  L   +   P L+ L   +N LT
Sbjct: 59  NVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLT 118

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLP  M  L+NL+  N+S N+L+ FP +I ++  LK LYL +N L  +     +L  L
Sbjct: 119 --SLPSAMRELENLQKLNVSHNKLKIFPEEITNLRNLKCLYLQHNELTCISEGFEQLSNL 176

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P +F  L  L  L LS NQL+SLPA I+ +K LK L  ++N L T+P
Sbjct: 177 EDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLETIP 236

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            E+  +    E L+ L L  NKLR LP E  +   L EL + +N
Sbjct: 237 PELAGM----ESLELLYLRRNKLRFLP-EFPSCSLLKELHVGEN 275



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 81/229 (35%), Positives = 121/229 (52%), Gaps = 14/229 (6%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           EN+  L + HN L  FP+  +   NL+ L L +N +T + +       L  L   NN LT
Sbjct: 128 ENLQKLNVSHNKLKIFPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLT 187

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             ++P   S+L +L   NLS NQL+  P +I  +  LK+L   +N L  +P E+  +  L
Sbjct: 188 --TVPASFSSLSSLVRLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESL 245

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLL---LHNNKLR 231
            +L L  N L  +P+ F     L+ L + +NQ+E L A   +LK L S+L   L +NKL+
Sbjct: 246 ELLYLRRNKLRFLPE-FPSCSLLKELHVGENQIEMLEA--EHLKHLNSILVLDLRDNKLK 302

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           ++P EII L    + L+ L L NN + +LP  +  L  L  L+L  NPL
Sbjct: 303 SVPDEIILL----QSLERLDLSNNDISSLPYSLGNLH-LKFLALEGNPL 346



 Score = 85.5 bits (210), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 112/223 (50%), Gaps = 35/223 (15%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           N+  L L HN L+   +   + +NL  LDLSNNR+T +P + ++  LS+L+ R NL + +
Sbjct: 152 NLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPASFSS--LSSLV-RLNLSSNQ 208

Query: 117 --SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPR-------- 166
             SLP +++ +K LK  + + N LE  P ++  + +L+ LYL  N L  +P         
Sbjct: 209 LKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLPEFPSCSLLK 268

Query: 167 -------EINKLCKLH--------VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
                  +I  L   H        VL L  N L  +PD    L  LE L LS+N + SLP
Sbjct: 269 ELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLP 328

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEII------TLKCLSEKLK 248
            S+ NL  LK L L  N LRT+  EII       LK L  K+K
Sbjct: 329 YSLGNLH-LKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIK 370



 Score = 68.2 bits (165), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 9/199 (4%)

Query: 74  NASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE--SLPKDMSNLKNL-KV 130
           N      L+ LD S+ + T +P  + N   S +I   N    +   +PK M  LK +   
Sbjct: 394 NIHAIITLKILDYSDKQATLIPDEVFNAVKSNIITSINFSKNQLCEIPKRMVELKEMVSD 453

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NLS N+L    +++  +  L +L L NN LN +P E+  L +L  ++L  N    +P+ 
Sbjct: 454 VNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKMLPEV 513

Query: 191 FGDLYQLEALILSDNQLESL-PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
              ++ LE +++S+NQ+ S+ P  +  ++ L +L L NN L  +P E+    C++  L++
Sbjct: 514 LYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGN--CVN--LRT 569

Query: 250 LLLHNNKLRTLPTEIITLK 268
           LLL  N  R +P   I +K
Sbjct: 570 LLLDGNPFR-VPRAAILIK 587



 Score = 42.7 bits (99), Expect = 0.29,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 3/105 (2%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTAESLPKD 121
           L +N L+  P+       L++++LS NR   LP+ +   F L T++  NN + +   P+ 
Sbjct: 479 LRNNFLNSLPEEMESLVRLQTINLSFNRFKMLPEVLYRIFTLETILISNNQVGSVD-PQK 537

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPR 166
           M  ++NL   +L  N L Q P ++ +   L+ L L  N    VPR
Sbjct: 538 MKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNPF-RVPR 581



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 78/301 (25%), Positives = 125/301 (41%), Gaps = 55/301 (18%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           QIE+L   ++ K   +I  L L  N L   PD      +L  LDLSNN I+ LP ++ N 
Sbjct: 276 QIEML-EAEHLKHLNSILVLDLRDNKLKSVPDEIILLQSLERLDLSNNDISSLPYSLGNL 334

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPT---LKYLYL-- 156
                                    +LK   L GN L     +I++  T   LKYL    
Sbjct: 335 -------------------------HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKI 369

Query: 157 ----------GNNSLNHVPRE----INKLCKLHVLSLGGNSLTDIPDTFGDLYQ---LEA 199
                        +   +P E    I+ +  L +L       T IPD   +  +   + +
Sbjct: 370 KDDGPSQSESAAETAMTLPSESRVNIHAIITLKILDYSDKQATLIPDEVFNAVKSNIITS 429

Query: 200 LILSDNQLESLPASISNLK-MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
           +  S NQL  +P  +  LK M+  + L  NKL  +  E+    C+ +KL  L L NN L 
Sbjct: 430 INFSKNQLCEIPKRMVELKEMVSDVNLSFNKLSFISLEL----CMLQKLTFLDLRNNFLN 485

Query: 259 TLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQN 318
           +LP E+ +L  L  ++L  N    + + ++ Y+  +L  +     +V  +D  +  + +N
Sbjct: 486 SLPEEMESLVRLQTINLSFNRF--KMLPEVLYRIFTLETILISNNQVGSVDPQKMKMMEN 543

Query: 319 L 319
           L
Sbjct: 544 L 544


>gi|61806462|ref|NP_001013463.1| leucine-rich repeat-containing protein 1 [Danio rerio]
 gi|60551959|gb|AAH90814.1| Zgc:101523 [Danio rerio]
          Length = 526

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 93/275 (33%), Positives = 140/275 (50%), Gaps = 25/275 (9%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P      T LR L LS+N I  LP  I NF  L  L I+RN+++ 
Sbjct: 37  SLEELLLDANQLRDLPKPFFNLTKLRKLGLSDNEIQRLPGDIANFNQLVELDISRNDIM- 95

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              LP+ +S  K L+V + SGN L + P    ++  L  L + + SL  +P  I  LC L
Sbjct: 96  --ELPESISYCKTLQVADFSGNPLTRLPESFPELRNLACLSINDISLQALPDNIGNLCNL 153

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P++   L +LE L +  N+L +LP +I  L  LK L L  N+L  +P
Sbjct: 154 VSLELRENLLTYLPESLSQLQKLEELDVGSNELYNLPETIGCLVSLKDLWLDGNQLSDIP 213

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPS 294
            E+ +++ L+     L +  NKL  LP E+  L  L++L      LV + + D+   P  
Sbjct: 214 AEVGSMRSLT----CLDVSENKLERLPEEMGNLLSLTDL------LVSQNLIDLL--PEG 261

Query: 295 LLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHC 329
           + +L  + L + + D ++      LVQ  ES  HC
Sbjct: 262 IGKL--KRLSILKADQNR------LVQLPESIGHC 288



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 86/264 (32%), Positives = 121/264 (45%), Gaps = 28/264 (10%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI- 98
           A Q+  LP   +N     +  L L  N +   P + + F  L  LD+S N I  LP++I 
Sbjct: 45  ANQLRDLPKPFFNLT--KLRKLGLSDNEIQRLPGDIANFNQLVELDISRNDIMELPESIS 102

Query: 99  ---------------TNFPLSTLIARN------NLLTAESLPKDMSNLKNLKVFNLSGNQ 137
                          T  P S    RN      N ++ ++LP ++ NL NL    L  N 
Sbjct: 103 YCKTLQVADFSGNPLTRLPESFPELRNLACLSINDISLQALPDNIGNLCNLVSLELRENL 162

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           L   P  +  +  L+ L +G+N L ++P  I  L  L  L L GN L+DIP   G +  L
Sbjct: 163 LTYLPESLSQLQKLEELDVGSNELYNLPETIGCLVSLKDLWLDGNQLSDIPAEVGSMRSL 222

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKL 257
             L +S+N+LE LP  + NL  L  LL+  N +  LP  I  LK    +L  L    N+L
Sbjct: 223 TCLDVSENKLERLPEEMGNLLSLTDLLVSQNLIDLLPEGIGKLK----RLSILKADQNRL 278

Query: 258 RTLPTEIITLKCLSELSLRDNPLV 281
             LP  I   + L+EL L +N LV
Sbjct: 279 VQLPESIGHCESLTELVLTENQLV 302



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 80/266 (30%), Positives = 136/266 (51%), Gaps = 17/266 (6%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF- 101
           ++ LP+N  N    N+ +L L  N L++ P++ S+   L  LD+ +N + +LP+ I    
Sbjct: 140 LQALPDNIGNLC--NLVSLELRENLLTYLPESLSQLQKLEELDVGSNELYNLPETIGCLV 197

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L  L    N L+   +P ++ ++++L   ++S N+LE+ P ++ ++ +L  L +  N +
Sbjct: 198 SLKDLWLDGNQLS--DIPAEVGSMRSLTCLDVSENKLERLPEEMGNLLSLTDLLVSQNLI 255

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
           + +P  I KL +L +L    N L  +P++ G    L  L+L++NQL +LP SI  LK L 
Sbjct: 256 DLLPEGIGKLKRLSILKADQNRLVQLPESIGHCESLTELVLTENQLVNLPRSIGKLKKLS 315

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +     N+L +LP EI    C S  L  L +  N+L  +P E+     L  L L  N L+
Sbjct: 316 NFNCDRNRLASLPKEIGG--CCS--LNVLCVRENRLMRIPPELSQASELHVLDLSGNRLL 371

Query: 282 IRFVSDMTYKPPSLLELASRTLKVHE 307
                   Y P +L  L  + L + E
Sbjct: 372 --------YLPLTLTSLRLKALWLSE 389



 Score = 68.6 bits (166), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 90/199 (45%), Gaps = 27/199 (13%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L  N LS  P       +L  LD+S N++  LP+ + N   L+ L+   NL+  + LP
Sbjct: 202 LWLDGNQLSDIPAEVGSMRSLTCLDVSENKLERLPEEMGNLLSLTDLLVSQNLI--DLLP 259

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPR------------- 166
           + +  LK L +     N+L Q P  I    +L  L L  N L ++PR             
Sbjct: 260 EGIGKLKRLSILKADQNRLVQLPESIGHCESLTELVLTENQLVNLPRSIGKLKKLSNFNC 319

Query: 167 ----------EINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
                     EI   C L+VL +  N L  IP       +L  L LS N+L  LP ++++
Sbjct: 320 DRNRLASLPKEIGGCCSLNVLCVRENRLMRIPPELSQASELHVLDLSGNRLLYLPLTLTS 379

Query: 217 LKMLKSLLLHNNKLRTLPT 235
           L+ LK+L L  N+ + L T
Sbjct: 380 LR-LKALWLSENQSQPLLT 397


>gi|386781944|ref|NP_001247952.1| leucine-rich repeat-containing protein 40 [Macaca mulatta]
 gi|355745366|gb|EHH49991.1| hypothetical protein EGM_00744 [Macaca fascicularis]
 gi|380814504|gb|AFE79126.1| leucine-rich repeat-containing protein 40 [Macaca mulatta]
 gi|383410331|gb|AFH28379.1| leucine-rich repeat-containing protein 40 [Macaca mulatta]
          Length = 602

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 86/224 (38%), Positives = 122/224 (54%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFP-DNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           N+D     + NLSF   +   + T+L  L +SNN++  L   +   P L+ L   +N LT
Sbjct: 59  NVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQSLTDDLRLLPALTVLDIHDNQLT 118

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLP  M  L+NL+  N+S N+L+ FP +I ++  LK LYL +N L  +     +L  L
Sbjct: 119 --SLPSAMRELENLQKLNVSHNKLKIFPEEITNLRNLKCLYLQHNELTCISEGFEQLSNL 176

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P +F  L  L  L LS NQL+SLPA I+ +K LK L  ++N L T+P
Sbjct: 177 EDLDLSNNRLTTVPASFSSLSSLVRLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLETIP 236

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            E+  +    E L+ L L  NKLR LP E  +   L EL + +N
Sbjct: 237 PELAGM----ESLELLYLRRNKLRFLP-EFPSCSLLKELHVGEN 275



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 79/223 (35%), Positives = 112/223 (50%), Gaps = 35/223 (15%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           N+  L L HN L+   +   + +NL  LDLSNNR+T +P + ++  LS+L+ R NL + +
Sbjct: 152 NLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLTTVPASFSS--LSSLV-RLNLSSNQ 208

Query: 117 --SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPR-------- 166
             SLP +++ +K LK  + + N LE  P ++  + +L+ LYL  N L  +P         
Sbjct: 209 LKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESLELLYLRRNKLRFLPEFPSCSLLK 268

Query: 167 -------EINKLCKLH--------VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
                  +I  L   H        VL L  N L  +PD    L  LE L LS+N + SLP
Sbjct: 269 ELHVGENQIEMLEAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLP 328

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEII------TLKCLSEKLK 248
            S+ NL  LK L L  N LRT+  EII       LK L  K+K
Sbjct: 329 YSLGNLH-LKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIK 370



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 80/229 (34%), Positives = 120/229 (52%), Gaps = 14/229 (6%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           EN+  L + HN L  FP+  +   NL+ L L +N +T + +       L  L   NN LT
Sbjct: 128 ENLQKLNVSHNKLKIFPEEITNLRNLKCLYLQHNELTCISEGFEQLSNLEDLDLSNNRLT 187

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             ++P   S+L +L   NLS NQL+  P +I  +  LK+L   +N L  +P E+  +  L
Sbjct: 188 --TVPASFSSLSSLVRLNLSSNQLKSLPAEINRMKRLKHLDCNSNLLETIPPELAGMESL 245

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLL---LHNNKLR 231
            +L L  N L  +P+ F     L+ L + +NQ+E L A   +LK L S+L   L +NKL+
Sbjct: 246 ELLYLRRNKLRFLPE-FPSCSLLKELHVGENQIEMLEA--EHLKHLNSILVLDLRDNKLK 302

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           ++P EI  L    + L+ L L NN + +LP  +  L  L  L+L  NPL
Sbjct: 303 SVPDEITLL----QSLERLDLSNNDISSLPYSLGNLH-LKFLALEGNPL 346



 Score = 67.8 bits (164), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 60/199 (30%), Positives = 102/199 (51%), Gaps = 9/199 (4%)

Query: 74  NASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE--SLPKDMSNLKNL-KV 130
           N      L+ LD S+ + T +P  + N   S +I   N    +   +PK M  LK +   
Sbjct: 394 NIHAIITLKILDYSDKQATLIPDEVFNAVKSNIITSINFSKNQLCEIPKRMVELKEMVSD 453

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NLS N+L    +++  +  L +L L NN LN +P E+  L +L  ++L  N    +P+ 
Sbjct: 454 VNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLVRLQTINLSFNRFKMLPEV 513

Query: 191 FGDLYQLEALILSDNQLESL-PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
              ++ LE +++S+NQ+ S+ P  +  ++ L +L L NN L  +P E+    C++  L++
Sbjct: 514 LYRIFTLETILISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGN--CVN--LRT 569

Query: 250 LLLHNNKLRTLPTEIITLK 268
           LLL  N  R +P   I +K
Sbjct: 570 LLLDGNPFR-VPRAAILIK 587



 Score = 43.9 bits (102), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 107/257 (41%), Gaps = 53/257 (20%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           QIE+L   ++ K   +I  L L  N L   PD  +   +L  LDLSNN I+ LP ++ N 
Sbjct: 276 QIEML-EAEHLKHLNSILVLDLRDNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGNL 334

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPT---LKYLYL-- 156
                                    +LK   L GN L     +I++  T   LKYL    
Sbjct: 335 -------------------------HLKFLALEGNPLRTIRREIINKGTQEVLKYLRSKI 369

Query: 157 ----------GNNSLNHVPRE----INKLCKLHVLSLGGNSLTDIPDTFGDLYQ---LEA 199
                        +   +P E    I+ +  L +L       T IPD   +  +   + +
Sbjct: 370 KDDGPSQSESAAETAMTLPSESRVNIHAIITLKILDYSDKQATLIPDEVFNAVKSNIITS 429

Query: 200 LILSDNQLESLPASISNLK-MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
           +  S NQL  +P  +  LK M+  + L  NKL  +  E+    C+ +KL  L L NN L 
Sbjct: 430 INFSKNQLCEIPKRMVELKEMVSDVNLSFNKLSFISLEL----CMLQKLTFLDLRNNFLN 485

Query: 259 TLPTEIITLKCLSELSL 275
           +LP E+ +L  L  ++L
Sbjct: 486 SLPEEMESLVRLQTINL 502



 Score = 42.7 bits (99), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 3/105 (2%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTAESLPKD 121
           L +N L+  P+       L++++LS NR   LP+ +   F L T++  NN + +   P+ 
Sbjct: 479 LRNNFLNSLPEEMESLVRLQTINLSFNRFKMLPEVLYRIFTLETILISNNQVGSVD-PQK 537

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPR 166
           M  ++NL   +L  N L Q P ++ +   L+ L L  N    VPR
Sbjct: 538 MKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNPF-RVPR 581


>gi|313227075|emb|CBY22222.1| unnamed protein product [Oikopleura dioica]
          Length = 1092

 Score =  101 bits (251), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 125/260 (48%), Gaps = 16/260 (6%)

Query: 19  FKTVSIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKF 78
           FK V++K L+ S + L +  L  +I  L           +  L L  N+L   P+N    
Sbjct: 60  FKLVNLKKLNLSDNDLSN--LGQEISQL---------SKLVELDLSRNDLGRIPENIKML 108

Query: 79  TNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
             L S+D S N +T +P+ + N   S    + N ++ E  P++  +LK L+      N +
Sbjct: 109 ALLESVDFSANPMTRIPETMVNL-ASLKHLKINAISLERFPENFGDLKTLETLEARENMV 167

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
              P  I ++P L+YL LG N +  +P +  KL  L  L +  N LT +P++ G L  L 
Sbjct: 168 MTLPETICELPNLQYLDLGENEITKLPEKFGKLSNLLELWMDDNDLTSLPESIGGLVNLT 227

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
               + N+LE +P SISN   +  L L  N L  LP  I +LK LSE    L + NNKL 
Sbjct: 228 LADFTKNKLEQIPDSISNCVNISVLTLKENYLSYLPHSIGSLKKLSE----LTVDNNKLC 283

Query: 259 TLPTEIITLKCLSELSLRDN 278
            L   I     L+EL L +N
Sbjct: 284 ELTESIGQCVALTELILTEN 303



 Score = 94.4 bits (233), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 102/329 (31%), Positives = 153/329 (46%), Gaps = 54/329 (16%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI----ARNNL 112
           +++ LLL  NN+   P    K  NL+ L+LS+N +++L Q I+   LS L+    +RN+L
Sbjct: 41  SLEELLLGSNNIKELPKQFFKLVNLKKLNLSDNDLSNLGQEISQ--LSKLVELDLSRNDL 98

Query: 113 -----------------LTAESL---PKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLK 152
                             +A  +   P+ M NL +LK   ++   LE+FP    D+ TL+
Sbjct: 99  GRIPENIKMLALLESVDFSANPMTRIPETMVNLASLKHLKINAISLERFPENFGDLKTLE 158

Query: 153 YLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPA 212
            L    N +  +P  I +L  L  L LG N +T +P+ FG L  L  L + DN L SLP 
Sbjct: 159 TLEARENMVMTLPETICELPNLQYLDLGENEITKLPEKFGKLSNLLELWMDDNDLTSLPE 218

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSE 272
           SI  L  L       NKL  +P  I    C++  +  L L  N L  LP  I +LK LSE
Sbjct: 219 SIGGLVNLTLADFTKNKLEQIPDSISN--CVN--ISVLTLKENYLSYLPHSIGSLKKLSE 274

Query: 273 LSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNLVQYLESAHHCVNP 332
           L++ +N L              L E   + + + E+      L +NL+Q L  +  C+  
Sbjct: 275 LTVDNNKLC------------ELTESIGQCVALTEL-----ILTENLIQVLPESVACL-- 315

Query: 333 KCK-GV--FFDNRIEHI-KFVDFCGKYRI 357
            C+ GV     NRI H+ + +  C   R+
Sbjct: 316 -CRLGVLNLGRNRITHLPEKIGKCKALRM 343



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 85/260 (32%), Positives = 125/260 (48%), Gaps = 17/260 (6%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A  +E  P N  + K   ++TL    N +   P+   +  NL+ LDL  N IT LP+   
Sbjct: 141 AISLERFPENFGDLK--TLETLEARENMVMTLPETICELPNLQYLDLGENEITKLPEKFG 198

Query: 100 NFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
               L  L   +N LT  SLP+ +  L NL + + + N+LEQ P  I +   +  L L  
Sbjct: 199 KLSNLLELWMDDNDLT--SLPESIGGLVNLTLADFTKNKLEQIPDSISNCVNISVLTLKE 256

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L+++P  I  L KL  L++  N L ++ ++ G    L  LIL++N ++ LP S++ L 
Sbjct: 257 NYLSYLPHSIGSLKKLSELTVDNNKLCELTESIGQCVALTELILTENLIQVLPESVACLC 316

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            L  L L  N++  LP +I   K     L+ L L  N L  +P  I  LK L  L +  N
Sbjct: 317 RLGVLNLGRNRITHLPEKIGKCKA----LRMLFLRENHLERIPETIGDLKNLQTLDVAGN 372

Query: 279 PLVIRFVSDMTYKPPSLLEL 298
            L         Y P SLL+L
Sbjct: 373 RL--------DYLPDSLLQL 384


>gi|194215174|ref|XP_001916975.1| PREDICTED: LOW QUALITY PROTEIN: protein scribble homolog [Equus
           caballus]
          Length = 1642

 Score =  101 bits (251), Expect = 8e-19,   Method: Composition-based stats.
 Identities = 72/223 (32%), Positives = 112/223 (50%), Gaps = 10/223 (4%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF- 101
           ++ +P   Y +   +++ LLL  N L   P    +  NLR L LS+N I  LP  + NF 
Sbjct: 24  LQAVPEEIY-RYSRSLEELLLDANQLRELPKPFFRLLNLRKLGLSDNEIQRLPPEVANFM 82

Query: 102 PLSTL-IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
            L  L ++RN++     +P+ +   K L++ + SGN L + P     + +L +L L + S
Sbjct: 83  QLVELDVSRNDI---PEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDVS 139

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L  +P ++  L  L  L L  N L  +P +   L +LE L L  N LE LP ++  L  L
Sbjct: 140 LQSLPGDVGNLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNL 199

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTE 263
           + L L  N+L  LP E+  L+    +L  L +  N+L  LP E
Sbjct: 200 RELWLDRNQLSALPPELGNLR----RLVCLDVSENRLEELPAE 238



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 76/225 (33%), Positives = 111/225 (49%), Gaps = 7/225 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ TL L  N L   P + S    L  LDL  N +  LP  +   P L  L    N L+A
Sbjct: 152 NLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQLSA 211

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP ++ NL+ L   ++S N+LE+ P ++  +  L  L L  N L  +P  I +L +L 
Sbjct: 212 --LPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N L ++ +  GD   L  LIL++N L +LP S+  L  L +L +  N L  LP 
Sbjct: 270 ILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLPP 329

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           EI    C++  L  L L +N+L  LP E+     L  L +  N L
Sbjct: 330 EI--GGCVA--LSVLSLRDNRLAVLPPELAHTAELHVLDVAGNRL 370



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Composition-based stats.
 Identities = 101/354 (28%), Positives = 144/354 (40%), Gaps = 82/354 (23%)

Query: 29  FSYSSLDSETL--ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           + YS    E L  A Q+  LP   +  +  N+  L L  N +   P   + F  L  LD+
Sbjct: 32  YRYSRSLEELLLDANQLRELPKPFF--RLLNLRKLGLSDNEIQRLPPEVANFMQLVELDV 89

Query: 87  SNNRITHLPQAI-----------TNFPLSTL------------IARNNLLTAESLPKDMS 123
           S N I  +P++I           +  PLS L            +A N++ + +SLP D+ 
Sbjct: 90  SRNDIPEIPESIKFCKALEIADFSGNPLSRLPEGFTQLRSLAHLALNDV-SLQSLPGDVG 148

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
           NL NL    L  N L+  P  +  +  L+ L LG N L  +P  +  L  L  L L  N 
Sbjct: 149 NLANLVTLELRENLLKSLPASLSFLVKLEQLDLGGNDLEVLPDTLGALPNLRELWLDRNQ 208

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPAS-----------------------ISNLKML 220
           L+ +P   G+L +L  L +S+N+LE LPA                        I  LK L
Sbjct: 209 LSALPPELGNLRRLVCLDVSENRLEELPAELGGLVLLTDLLLSQNLLQRLPDGIGQLKQL 268

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSE-------------------KLKSLLLHNNKLRTLP 261
             L +  N+L  +   I   + LSE                   KL +L +  N L  LP
Sbjct: 269 SILKVDQNRLCEVTEAIGDCENLSELILTENLLTALPHSLGKLTKLTNLNVDRNHLEVLP 328

Query: 262 TEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHL 315
            EI     LS LSLRDN L +         PP L    + T ++H +D +   L
Sbjct: 329 PEIGGCVALSVLSLRDNRLAVL--------PPEL----AHTAELHVLDVAGNRL 370



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Composition-based stats.
 Identities = 66/204 (32%), Positives = 99/204 (48%), Gaps = 10/204 (4%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ S+D  +  +  +P+ I  +   L  L+   N L    LPK    L NL+   LS N+
Sbjct: 13  HVESVDKRHCSLQAVPEEIYRYSRSLEELLLDANQL--RELPKPFFRLLNLRKLGLSDNE 70

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK-LHVLSLGGNSLTDIPDTFGDLYQ 196
           +++ P ++ +   L  L +  N +  +P  I K CK L +    GN L+ +P+ F  L  
Sbjct: 71  IQRLPPEVANFMQLVELDVSRNDIPEIPESI-KFCKALEIADFSGNPLSRLPEGFTQLRS 129

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
           L  L L+D  L+SLP  + NL  L +L L  N L++LP  +  L     KL+ L L  N 
Sbjct: 130 LAHLALNDVSLQSLPGDVGNLANLVTLELRENLLKSLPASLSFLV----KLEQLDLGGND 185

Query: 257 LRTLPTEIITLKCLSELSLRDNPL 280
           L  LP  +  L  L EL L  N L
Sbjct: 186 LEVLPDTLGALPNLRELWLDRNQL 209



 Score = 80.1 bits (196), Expect = 2e-12,   Method: Composition-based stats.
 Identities = 82/285 (28%), Positives = 127/285 (44%), Gaps = 19/285 (6%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLP-QAITNF 101
           +E+LP  D      N+  L L  N LS  P        L  LD+S NR+  LP +     
Sbjct: 186 LEVLP--DTLGALPNLRELWLDRNQLSALPPELGNLRRLVCLDVSENRLEELPAELGGLV 243

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L+ L+   NLL  + LP  +  LK L +  +  N+L +    I D   L  L L  N L
Sbjct: 244 LLTDLLLSQNLL--QRLPDGIGQLKQLSILKVDQNRLCEVTEAIGDCENLSELILTENLL 301

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +P  + KL KL  L++  N L  +P   G    L  L L DN+L  LP  +++   L 
Sbjct: 302 TALPHSLGKLTKLTNLNVDRNHLEVLPPEIGGCVALSVLSLRDNRLAVLPPELAHTAELH 361

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
            L +  N+L++LP  +  L      LK+L L  N+ + +      L+  +E   +    V
Sbjct: 362 VLDVAGNRLQSLPFALTHL-----NLKALWLAENQAQPM------LRFQTEDDAQTGEKV 410

Query: 282 IRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQ-NLVQYLES 325
           +         PPSL +L  R+       +S   L + +++Q+LE+
Sbjct: 411 LTCYLLPQQPPPSLEDLGQRSSPSES--WSDAPLSRVSVIQFLEA 453


>gi|395735874|ref|XP_003776657.1| PREDICTED: protein LAP2 isoform 3 [Pongo abelii]
          Length = 1302

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 132/288 (45%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLD---------SETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|332233712|ref|XP_003266047.1| PREDICTED: protein LAP2 isoform 2 [Nomascus leucogenys]
          Length = 1301

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 132/288 (45%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLD---------SETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|194380802|dbj|BAG58554.1| unnamed protein product [Homo sapiens]
          Length = 610

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 78/239 (32%), Positives = 118/239 (49%), Gaps = 9/239 (3%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP 102
           +E LP N    +   +  L L  N L   P   ++ T L  LDL +N  T +P+ +    
Sbjct: 150 LEFLPAN--FGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLS 207

Query: 103 -LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
            L       N LT   +P  + +LK L   ++S N +E     I     L+ L L +NSL
Sbjct: 208 GLKEFWMDANRLTF--IPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSL 265

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +P  I  L  +  L +  N L  +PD+ G L  +E L  S N++E+LP+SI  L  L+
Sbjct: 266 QQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLR 325

Query: 222 SLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           +    +N L+ LP EI + K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 326 TFAADHNYLQQLPPEIGSWKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 95.1 bits (235), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 132/288 (45%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304



 Score = 80.5 bits (197), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 79/151 (52%), Gaps = 1/151 (0%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           EN+  LLL  N+L   P+      N+ +L +  N++ +LP +I    +S      +    
Sbjct: 253 ENLQDLLLSSNSLQQLPETIGSLKNITTLKIDENQLMYLPDSIGGL-ISVEELDCSFNEV 311

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           E+LP  +  L NL+ F    N L+Q P +I     +  L+L +N L  +P E+  + KL 
Sbjct: 312 EALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLPEEMGDMQKLK 371

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQ 206
           V++L  N L ++P +F  L QL A+ LSDNQ
Sbjct: 372 VINLSDNRLKNLPFSFTKLQQLTAMWLSDNQ 402



 Score = 74.7 bits (182), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 108/225 (48%), Gaps = 15/225 (6%)

Query: 41  TQIELL--PNNDYNKKPENIDTL------LLYHNNLSFFPDNASKFTNLRSLDLSNNRIT 92
           TQ+E L   +N++ + PE ++ L       +  N L+F P        L  LD+S N I 
Sbjct: 184 TQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIE 243

Query: 93  HLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
            + + I+    L  L+  +N L  + LP+ + +LKN+    +  NQL   P  I  + ++
Sbjct: 244 MVEEGISTCENLQDLLLSSNSL--QQLPETIGSLKNITTLKIDENQLMYLPDSIGGLISV 301

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           + L    N +  +P  I +L  L   +   N L  +P   G    +  L L  N+LE+LP
Sbjct: 302 EELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGSWKNITVLFLHSNKLETLP 361

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
             + +++ LK + L +N+L+ LP     L    ++L ++ L +N+
Sbjct: 362 EEMGDMQKLKVINLSDNRLKNLPFSFTKL----QQLTAMWLSDNQ 402


>gi|29791785|gb|AAH50692.1| ERBB2IP protein, partial [Homo sapiens]
          Length = 633

 Score =  101 bits (251), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 132/288 (45%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLD---------SETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|114599989|ref|XP_001162676.1| PREDICTED: protein LAP2 isoform 2 [Pan troglodytes]
 gi|397514431|ref|XP_003827491.1| PREDICTED: protein LAP2 isoform 4 [Pan paniscus]
 gi|410217136|gb|JAA05787.1| erbb2 interacting protein [Pan troglodytes]
 gi|410260626|gb|JAA18279.1| erbb2 interacting protein [Pan troglodytes]
 gi|410300754|gb|JAA28977.1| erbb2 interacting protein [Pan troglodytes]
 gi|410354911|gb|JAA44059.1| erbb2 interacting protein [Pan troglodytes]
          Length = 1302

 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 132/288 (45%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLD---------SETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|321460374|gb|EFX71417.1| hypothetical protein DAPPUDRAFT_327214 [Daphnia pulex]
          Length = 1847

 Score =  100 bits (250), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 73/224 (32%), Positives = 116/224 (51%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLT 114
           +++ LLL  N++   P N  +   LR L LS+N I  +PQ I NF   +   ++RN++  
Sbjct: 35  SLEELLLDANHIRDLPKNFFRLAKLRKLSLSDNEIQRIPQDIQNFENLVELDVSRNDI-- 92

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+ + ++K L+V + S N + + P   + +  L  L L + SL+ +P +   L  L
Sbjct: 93  -SDIPETIKHVKALQVADFSSNPIPRLPAGFVQLKNLTVLGLNDMSLSSLPLDFGSLSNL 151

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             + L  N L  +P++   L +LE L L DN +E LPA I +L  L  L L +N+L  LP
Sbjct: 152 QSVELRENLLRTLPESMSQLTKLERLDLGDNDIEILPAHIGSLPALTELWLDHNQLGQLP 211

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            E+    C    L  L +  N L ++P EI  L  L++L L  N
Sbjct: 212 KEL----CQLTNLACLDVSENHLDSMPEEIGGLISLTDLHLSQN 251



 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 76/209 (36%), Positives = 109/209 (52%), Gaps = 7/209 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N+ ++ L  N L   P++ S+ T L  LDL +N I  LP  I + P L+ L   +N L  
Sbjct: 150 NLQSVELRENLLRTLPESMSQLTKLERLDLGDNDIEILPAHIGSLPALTELWLDHNQLG- 208

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LPK++  L NL   ++S N L+  P +I  + +L  L+L  N L  +P  I  L KL 
Sbjct: 209 -QLPKELCQLTNLACLDVSENHLDSMPEEIGGLISLTDLHLSQNFLESLPDGIGALSKLT 267

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT +    G    L+ LIL++N L  LP SI N+  L +L +  N+L  LP 
Sbjct: 268 ILKVDQNRLTTLNYAIGKCVALQELILTENFLTELPTSIGNMTKLTNLNVDRNRLHELPV 327

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           E+  L CL+     L L  NKL  LP E+
Sbjct: 328 EVGHLVCLN----VLSLRENKLHFLPNEL 352



 Score = 82.0 bits (201), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 81/281 (28%), Positives = 119/281 (42%), Gaps = 45/281 (16%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           +I+ +P +  N   EN+  L +  N++S  P+       L+  D S+N I  LP      
Sbjct: 68  EIQRIPQDIQNF--ENLVELDVSRNDISDIPETIKHVKALQVADFSSNPIPRLPAGFVQL 125

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSL 161
              T++  N++ +  SLP D  +L NL+   L  N L   P  +  +  L+ L LG+N +
Sbjct: 126 KNLTVLGLNDM-SLSSLPLDFGSLSNLQSVELRENLLRTLPESMSQLTKLERLDLGDNDI 184

Query: 162 NHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLK 221
             +P  I  L  L  L L  N L  +P     L  L  L +S+N L+S+P  I  L  L 
Sbjct: 185 EILPAHIGSLPALTELWLDHNQLGQLPKELCQLTNLACLDVSENHLDSMPEEIGGLISLT 244

Query: 222 SLLLHNNKLRTLPTEIITL---------------------KCLS---------------- 244
            L L  N L +LP  I  L                     KC++                
Sbjct: 245 DLHLSQNFLESLPDGIGALSKLTILKVDQNRLTTLNYAIGKCVALQELILTENFLTELPT 304

Query: 245 -----EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
                 KL +L +  N+L  LP E+  L CL+ LSLR+N L
Sbjct: 305 SIGNMTKLTNLNVDRNRLHELPVEVGHLVCLNVLSLRENKL 345



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 61/201 (30%), Positives = 91/201 (45%), Gaps = 8/201 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L HN L   P    + TNL  LD+S N +  +P+ I     L+ L    N L  ESLP
Sbjct: 200 LWLDHNQLGQLPKELCQLTNLACLDVSENHLDSMPEEIGGLISLTDLHLSQNFL--ESLP 257

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             +  L  L +  +  N+L      I     L+ L L  N L  +P  I  + KL  L++
Sbjct: 258 DGIGALSKLTILKVDQNRLTTLNYAIGKCVALQELILTENFLTELPTSIGNMTKLTNLNV 317

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L ++P   G L  L  L L +N+L  LP  + +   L  L +  N+L+ LP  +  
Sbjct: 318 DRNRLHELPVEVGHLVCLNVLSLRENKLHFLPNELGDCSELHVLDVSGNRLQYLPLSLTG 377

Query: 240 LKCLSEKLKSLLLHNNKLRTL 260
           L      LK++ L  N+ + +
Sbjct: 378 L-----NLKAIWLSENQAQPM 393



 Score = 67.0 bits (162), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 51/167 (30%), Positives = 81/167 (48%), Gaps = 5/167 (2%)

Query: 117 SLPKDMSNL-KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           S+P+D+    ++L+   L  N +   P     +  L+ L L +N +  +P++I     L 
Sbjct: 24  SVPEDLWRYSRSLEELLLDANHIRDLPKNFFRLAKLRKLSLSDNEIQRIPQDIQNFENLV 83

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L +  N ++DIP+T   +  L+    S N +  LPA    LK L  L L++  L +LP 
Sbjct: 84  ELDVSRNDISDIPETIKHVKALQVADFSSNPIPRLPAGFVQLKNLTVLGLNDMSLSSLPL 143

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           +  +L      L+S+ L  N LRTLP  +  L  L  L L DN + I
Sbjct: 144 DFGSLS----NLQSVELRENLLRTLPESMSQLTKLERLDLGDNDIEI 186


>gi|449514350|ref|XP_004177207.1| PREDICTED: LOW QUALITY PROTEIN: protein LAP2 [Taeniopygia guttata]
          Length = 1452

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 110/221 (49%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   S+ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKILPKTMSRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTL--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             +  LK L   ++S N +E     I    +L+ L L +NSL  +P  I  L K+  L +
Sbjct: 224 GFIGTLKQLTYLDVSKNNIEVVEEGISGCESLQDLLLSSNSLQQLPESIGSLKKVTTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+S+  L  +++    +N L  LP+EI  
Sbjct: 284 DENQLIYLPDSIGGLISVEELDCSFNEIETLPSSVGQLSNIRTFAADHNFLTQLPSEIGN 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL  LP E+  ++ L  ++L DN L
Sbjct: 344 WKHVT----VLFLHSNKLEFLPEEMGDMQKLKVINLSDNRL 380



 Score = 97.8 bits (242), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 90/288 (31%), Positives = 135/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI-ARNNLLTA----------- 115
           L+  P + +   NLR LD+S N I   P+ I N  + T++ A  N ++            
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNL 140

Query: 116 ----------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                     E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKILPKTMSRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    + GN LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNIEVVEEGISGCESLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK    K+ +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPESIGSLK----KVTTLKIDENQLIYLPDSIGGLISVEEL 304



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 75/238 (31%), Positives = 117/238 (49%), Gaps = 8/238 (3%)

Query: 43  IELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTN-LRSLDLSNNRITHLPQAITNF 101
           + L+P      + E + TL   H +L   P     F   L  L L  N+I  LP+ + N 
Sbjct: 9   LRLVPCRCLRGEEETVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC 68

Query: 102 -PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
             L  L   +N LT  +LP  ++NL NL+  ++S N +++FP  I +   L  +    N 
Sbjct: 69  QSLHKLSLPDNDLT--TLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNP 126

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           ++ +P   ++L  L  L L    L  +P  FG L +L+ L L +NQL+ LP ++S L  L
Sbjct: 127 ISKLPDGFSQLLNLTQLYLNDAFLEFLPANFGRLTKLQILELRENQLKILPKTMSRLTQL 186

Query: 221 KSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           + L L +N+   +P     L+ LS  LK   +  N+L  +P  I TLK L+ L +  N
Sbjct: 187 ERLDLGSNEFTEVPE---VLEQLS-GLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSKN 240



 Score = 74.7 bits (182), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 51/159 (32%), Positives = 83/159 (52%), Gaps = 9/159 (5%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTA 115
           E++  LLL  N+L   P++      + +L +  N++ +LP +I       LI+   L  +
Sbjct: 253 ESLQDLLLSSNSLQQLPESIGSLKKVTTLKIDENQLIYLPDSIGG-----LISVEELDCS 307

Query: 116 ----ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKL 171
               E+LP  +  L N++ F    N L Q P +I +   +  L+L +N L  +P E+  +
Sbjct: 308 FNEIETLPSSVGQLSNIRTFAADHNFLTQLPSEIGNWKHVTVLFLHSNKLEFLPEEMGDM 367

Query: 172 CKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
            KL V++L  N L ++P TF  L QL A+ LSDNQ + L
Sbjct: 368 QKLKVINLSDNRLKNLPFTFTKLQQLTAMWLSDNQSKPL 406



 Score = 69.3 bits (168), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 92/170 (54%), Gaps = 5/170 (2%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTL-IARNNLLTAESLPKDMS 123
           NN+    +  S   +L+ L LS+N +  LP++I +   ++TL I  N L+    LP  + 
Sbjct: 240 NNIEVVEEGISGCESLQDLLLSSNSLQQLPESIGSLKKVTTLKIDENQLIY---LPDSIG 296

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
            L +++  + S N++E  P  +  +  ++     +N L  +P EI     + VL L  N 
Sbjct: 297 GLISVEELDCSFNEIETLPSSVGQLSNIRTFAADHNFLTQLPSEIGNWKHVTVLFLHSNK 356

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L  +P+  GD+ +L+ + LSDN+L++LP + + L+ L ++ L +N+ + L
Sbjct: 357 LEFLPEEMGDMQKLKVINLSDNRLKNLPFTFTKLQQLTAMWLSDNQSKPL 406



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 109/229 (47%), Gaps = 15/229 (6%)

Query: 41  TQIELL--PNNDYNKKPENIDTL------LLYHNNLSFFPDNASKFTNLRSLDLSNNRIT 92
           TQ+E L   +N++ + PE ++ L       +  N L+  P        L  LD+S N I 
Sbjct: 184 TQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTLIPGFIGTLKQLTYLDVSKNNIE 243

Query: 93  HLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
            + + I+    L  L+  +N L  + LP+ + +LK +    +  NQL   P  I  + ++
Sbjct: 244 VVEEGISGCESLQDLLLSSNSL--QQLPESIGSLKKVTTLKIDENQLIYLPDSIGGLISV 301

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           + L    N +  +P  + +L  +   +   N LT +P   G+   +  L L  N+LE LP
Sbjct: 302 EELDCSFNEIETLPSSVGQLSNIRTFAADHNFLTQLPSEIGNWKHVTVLFLHSNKLEFLP 361

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
             + +++ LK + L +N+L+ LP     L    ++L ++ L +N+ + L
Sbjct: 362 EEMGDMQKLKVINLSDNRLKNLPFTFTKL----QQLTAMWLSDNQSKPL 406


>gi|55770895|ref|NP_001006600.1| protein LAP2 isoform 7 [Homo sapiens]
          Length = 1302

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 132/288 (45%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLD---------SETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|418666002|ref|ZP_13227434.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
 gi|410758251|gb|EKR19849.1| leucine rich repeat protein [Leptospira interrogans serovar
           Pyrogenes str. 2006006960]
          Length = 221

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 75/190 (39%), Positives = 105/190 (55%), Gaps = 3/190 (1%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           +N+ TL L  N L+  P    K  NL +L+LS+N++  L   +     L TL   +N LT
Sbjct: 2   KNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLT 61

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             +LP ++  L+NL   NLSGNQL   PI+I  +  L+ L L +N L  + +EI +L  L
Sbjct: 62  --TLPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNL 119

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             LSL  N L  +P   G L  L+ L L +NQL +LP  I  L+ L++L L+ N+L T P
Sbjct: 120 QTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFP 179

Query: 235 TEIITLKCLS 244
            EI  LK L 
Sbjct: 180 KEIGQLKNLQ 189



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 77/179 (43%), Positives = 98/179 (54%), Gaps = 6/179 (3%)

Query: 103 LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLN 162
           L TL   +N LT  +LP ++  L+NL   NLS NQL    I++  +  L  L L +N L 
Sbjct: 4   LQTLNLSDNQLT--TLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLT 61

Query: 163 HVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKS 222
            +P EI KL  LH L+L GN LT +P   G L  L+ L L  NQL +L   I  LK L++
Sbjct: 62  TLPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQT 121

Query: 223 LLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           L L  N+L  LP EI  L+ L E    L L NN+L  LP EI  L+ L  LSL  N L+
Sbjct: 122 LSLSYNRLVILPKEIGQLQNLQE----LNLWNNQLTALPIEIGQLQNLQTLSLYKNRLM 176



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/157 (43%), Positives = 89/157 (56%), Gaps = 4/157 (2%)

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           +KNL+  NLS NQL   PI+I  +  L  L L +N L  +  E+ KL  LH L+L  N L
Sbjct: 1   MKNLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQL 60

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           T +P   G L  L  L LS NQL +LP  I  L+ L+ L LH+N+L TL  EI  LK   
Sbjct: 61  TTLPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLK--- 117

Query: 245 EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
             L++L L  N+L  LP EI  L+ L EL+L +N L 
Sbjct: 118 -NLQTLSLSYNRLVILPKEIGQLQNLQELNLWNNQLT 153



 Score = 92.0 bits (227), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 80/197 (40%), Positives = 105/197 (53%), Gaps = 7/197 (3%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           NL++L+LS+N++T LP  I     L TL   +N L    L  ++  L+NL   NLS NQL
Sbjct: 3   NLQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAI--LLIEVGKLQNLHTLNLSDNQL 60

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
              PI+I  +  L  L L  N L  +P EI KL  L  L+L  N LT +      L  L+
Sbjct: 61  TTLPIEIGKLQNLHTLNLSGNQLTTLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQ 120

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L LS N+L  LP  I  L+ L+ L L NN+L  LP EI  L    + L++L L+ N+L 
Sbjct: 121 TLSLSYNRLVILPKEIGQLQNLQELNLWNNQLTALPIEIGQL----QNLQTLSLYKNRLM 176

Query: 259 TLPTEIITLKCLSELSL 275
           T P EI  LK L  L L
Sbjct: 177 TFPKEIGQLKNLQTLYL 193



 Score = 81.3 bits (199), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/177 (37%), Positives = 93/177 (52%), Gaps = 5/177 (2%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           K +N+ TL L  N L+       K  NL +L+LS+N++T LP  I     L TL    N 
Sbjct: 23  KLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTLPIEIGKLQNLHTLNLSGNQ 82

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           LT  +LP ++  L+NL+  NL  NQL     +I  +  L+ L L  N L  +P+EI +L 
Sbjct: 83  LT--TLPIEIGKLQNLQDLNLHSNQLTTLSKEIEQLKNLQTLSLSYNRLVILPKEIGQLQ 140

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL--HN 227
            L  L+L  N LT +P   G L  L+ L L  N+L + P  I  LK L++L L  HN
Sbjct: 141 NLQELNLWNNQLTALPIEIGQLQNLQTLSLYKNRLMTFPKEIGQLKNLQTLYLGGHN 197



 Score = 78.2 bits (191), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 61/132 (46%), Positives = 74/132 (56%), Gaps = 4/132 (3%)

Query: 151 LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           L+ L L +N L  +P EI KL  LH L+L  N L  +    G L  L  L LSDNQL +L
Sbjct: 4   LQTLNLSDNQLTTLPIEIGKLQNLHTLNLSDNQLAILLIEVGKLQNLHTLNLSDNQLTTL 63

Query: 211 PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
           P  I  L+ L +L L  N+L TLP EI  L    + L+ L LH+N+L TL  EI  LK L
Sbjct: 64  PIEIGKLQNLHTLNLSGNQLTTLPIEIGKL----QNLQDLNLHSNQLTTLSKEIEQLKNL 119

Query: 271 SELSLRDNPLVI 282
             LSL  N LVI
Sbjct: 120 QTLSLSYNRLVI 131


>gi|92097612|gb|AAI15016.1| ERBB2IP protein [Homo sapiens]
          Length = 1367

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 77/233 (33%), Positives = 114/233 (48%), Gaps = 13/233 (5%)

Query: 55  PENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLI 107
           P N D L       L  N L   P   ++ T L  LDL +N  T +P+ +     L    
Sbjct: 154 PANFDRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFW 213

Query: 108 ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPRE 167
              N LT   +P  + +LK L   ++S N +E     I     L+ L L +NSL  +P  
Sbjct: 214 MDANRLTF--IPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPET 271

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           I  L  +  L +  N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +
Sbjct: 272 IGSLKNITTLKIDENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADH 331

Query: 228 NKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           N L+ LP EI + K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 332 NYLQQLPPEIGSWKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 134/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI-ARNNLLTA----------- 115
           L+  P + +   NLR LD+S N I   P+ I N  + T++ A  N ++            
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 116 ----------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                     E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFDRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304



 Score = 57.8 bits (138), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/144 (33%), Positives = 70/144 (48%), Gaps = 5/144 (3%)

Query: 138 LEQFPIQILDIP-TLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQ 196
           LEQ P +I     TL+ LYL  N +  +P+++     LH LSL  N LT +P +  +L  
Sbjct: 34  LEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNCQSLHKLSLPDNDLTTLPASIANLIN 93

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
           L  L +S N ++  P +I N K+L  +    N +  LP     L  L++    L L++  
Sbjct: 94  LRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNLTQ----LYLNDAF 149

Query: 257 LRTLPTEIITLKCLSELSLRDNPL 280
           L  LP     L  L  L LR+N L
Sbjct: 150 LEFLPANFDRLTKLQILELRENQL 173


>gi|395735870|ref|XP_002815652.2| PREDICTED: protein LAP2 isoform 1 [Pongo abelii]
          Length = 1371

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 132/288 (45%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|332233710|ref|XP_003266046.1| PREDICTED: protein LAP2 isoform 1 [Nomascus leucogenys]
          Length = 1370

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 93.2 bits (230), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 132/288 (45%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|332233716|ref|XP_003266049.1| PREDICTED: protein LAP2 isoform 4 [Nomascus leucogenys]
          Length = 1345

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 132/288 (45%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|119571718|gb|EAW51333.1| erbb2 interacting protein, isoform CRA_b [Homo sapiens]
          Length = 1460

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 132/288 (45%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|198415792|ref|XP_002126526.1| PREDICTED: similar to Leucine-rich repeat-containing protein 40
           [Ciona intestinalis]
          Length = 815

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 85/245 (34%), Positives = 117/245 (47%), Gaps = 22/245 (8%)

Query: 23  SIKTLDFSYSSLDSETLATQIELLPNNDYNKKPENIDTL------LLYHNNLSFFPDNAS 76
           S+ +L FS +SL+          L NN     P+ I +L      +L  N L   P++ +
Sbjct: 270 SVYSLGFSLTSLN----------LTNNSLESIPDGIGSLKRLRVFMLSFNKLQTLPNDMN 319

Query: 77  KFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGN 136
              +L+ L +SNN +T+L   I    L TL A NN +T  SLP +M  L+ L + NL+ N
Sbjct: 320 GLVSLQQLHVSNNNLTNLSPLIGLLHLETLDASNNKIT--SLPTEMHTLRWLFILNLANN 377

Query: 137 QLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQ 196
           QL   P  I  I  LK LYL NN L  +P  + +   L V+    N LT++PD       
Sbjct: 378 QLTSLPPSIGHIKALKQLYLRNNRLESLPSTLGEQQLLQVVDASDNELTNLPDDLRKWRT 437

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNK 256
           LE LIL+ NQL  +P SI  L ML    + +N   T P         S+ L+ L L  N 
Sbjct: 438 LEQLILARNQLSQIPKSIKYLGMLDKFDVSDNNFVTSPLP----DAASKVLRELRLAGNP 493

Query: 257 LRTLP 261
            R  P
Sbjct: 494 WRLPP 498



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 73/218 (33%), Positives = 122/218 (55%), Gaps = 10/218 (4%)

Query: 83  SLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           SLDLS   +   P +I N   L  L    N  + +S+P ++  L+ L++ ++S NQ+ + 
Sbjct: 521 SLDLSRVELEEFPLSICNCRNLRELKLAGN--SIKSIPGNIGRLRLLEILDVSNNQVARI 578

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALI 201
           P QI  +  L+ L++ NN L +  + + KL  L +L+  GN LT +P+ FG+L +L ++ 
Sbjct: 579 PEQIGILTHLQELHVSNNCLENFAQNLTKLRSLQILNFAGNQLTQLPENFGELNKLTSMD 638

Query: 202 LSDNQLESLP-ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
           LSDNQL  LP   I  L  L +L +  N+++ +PT++  L     +++ + L  N L+ L
Sbjct: 639 LSDNQLLELPNDRIDVLASLMTLNISYNRVKNIPTDLPYL----YRMQIINLSRNDLKLL 694

Query: 261 PTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLEL 298
           P +I  +K L+ L L DN  +I  + +   K P+L EL
Sbjct: 695 PIDIWRMKSLTSLDLTDN--LIESIPESIAKLPALKEL 730



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 86/273 (31%), Positives = 132/273 (48%), Gaps = 51/273 (18%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNL- 112
           K   ++T  + +N +   P N  + +N+ SLD+S N I  LP++I   P S  ++ N + 
Sbjct: 135 KASGLETCDVSNNKIKKLPKNIGQ-SNMTSLDVSQNSIKILPKSIYRLPRSLDVSGNQIE 193

Query: 113 ------LTAES----------------LPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPT 150
                 +T +S                LP+D+  L+ L   N+SGN L+  P  I  +  
Sbjct: 194 VLPPIVITKKSKGNISQINLSDNKLSKLPEDIDKLQRLTHINVSGNHLQSLPTAIGSLKY 253

Query: 151 LKYLYLGNNSLNHVPREINKLC-KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
           L +L   +N++   P+ +  L   L  L+L  NSL  IPD  G L +L   +LS N+L++
Sbjct: 254 LHHLDASSNNIKVFPQSVYSLGFSLTSLNLTNNSLESIPDGIGSLKRLRVFMLSFNKLQT 313

Query: 210 LPASISNLKMLKSL---------------LLH-------NNKLRTLPTEIITLKCLSEKL 247
           LP  ++ L  L+ L               LLH       NNK+ +LPTE+ TL+ L    
Sbjct: 314 LPNDMNGLVSLQQLHVSNNNLTNLSPLIGLLHLETLDASNNKITSLPTEMHTLRWLF--- 370

Query: 248 KSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             L L NN+L +LP  I  +K L +L LR+N L
Sbjct: 371 -ILNLANNQLTSLPPSIGHIKALKQLYLRNNRL 402



 Score = 79.0 bits (193), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 107/214 (50%), Gaps = 33/214 (15%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
            N+  L L  N++   P N  +   L  LD+SNN++  +P+ I     L  L   NN L 
Sbjct: 540 RNLRELKLAGNSIKSIPGNIGRLRLLEILDVSNNQVARIPEQIGILTHLQELHVSNNCL- 598

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPI----------------QILDIP--------T 150
            E+  ++++ L++L++ N +GNQL Q P                 Q+L++P        +
Sbjct: 599 -ENFAQNLTKLRSLQILNFAGNQLTQLPENFGELNKLTSMDLSDNQLLELPNDRIDVLAS 657

Query: 151 LKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL 210
           L  L +  N + ++P ++  L ++ +++L  N L  +P     +  L +L L+DN +ES+
Sbjct: 658 LMTLNISYNRVKNIPTDLPYLYRMQIINLSRNDLKLLPIDIWRMKSLTSLDLTDNLIESI 717

Query: 211 PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
           P SI+ L  LK L L +NK++  P      KC++
Sbjct: 718 PESIAKLPALKELNLTDNKIKVWP------KCMA 745



 Score = 62.0 bits (149), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 61/200 (30%), Positives = 102/200 (51%), Gaps = 15/200 (7%)

Query: 84  LDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFP 142
           L   NN+I  +P++I+    L  +  RNN++ A  LP  ++ LK L   N+S N+L+  P
Sbjct: 73  LHAQNNKIKKIPRSISALQSLYEVDMRNNVIGA--LPASVAKLKKLSSLNVSDNRLKALP 130

Query: 143 IQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL-EALI 201
             I     L+   + NN +  +P+ I +   +  L +  NS+  +P +   +Y+L  +L 
Sbjct: 131 KTIHKASGLETCDVSNNKIKKLPKNIGQ-SNMTSLDVSQNSIKILPKS---IYRLPRSLD 186

Query: 202 LSDNQLESLPASISNLKM---LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
           +S NQ+E LP  +   K    +  + L +NKL  LP +I  L    ++L  + +  N L+
Sbjct: 187 VSGNQIEVLPPIVITKKSKGNISQINLSDNKLSKLPEDIDKL----QRLTHINVSGNHLQ 242

Query: 259 TLPTEIITLKCLSELSLRDN 278
           +LPT I +LK L  L    N
Sbjct: 243 SLPTAIGSLKYLHHLDASSN 262



 Score = 54.3 bits (129), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 78/154 (50%), Gaps = 10/154 (6%)

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
           V +   N++++ P  I  + +L  + + NN +  +P  + KL KL  L++  N L  +P 
Sbjct: 72  VLHAQNNKIKKIPRSISALQSLYEVDMRNNVIGALPASVAKLKKLSSLNVSDNRLKALPK 131

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
           T      LE   +S+N+++ LP +I    M  SL +  N ++ LP  I  L       +S
Sbjct: 132 TIHKASGLETCDVSNNKIKKLPKNIGQSNM-TSLDVSQNSIKILPKSIYRLP------RS 184

Query: 250 LLLHNNKLRTLPTEIITLKC---LSELSLRDNPL 280
           L +  N++  LP  +IT K    +S+++L DN L
Sbjct: 185 LDVSGNQIEVLPPIVITKKSKGNISQINLSDNKL 218



 Score = 52.8 bits (125), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 63/129 (48%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNL 125
           N L+  P+N  +   L S+DLS+N++  LP    +   S +    +    +++P D+  L
Sbjct: 619 NQLTQLPENFGELNKLTSMDLSDNQLLELPNDRIDVLASLMTLNISYNRVKNIPTDLPYL 678

Query: 126 KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLT 185
             +++ NLS N L+  PI I  + +L  L L +N +  +P  I KL  L  L+L  N + 
Sbjct: 679 YRMQIINLSRNDLKLLPIDIWRMKSLTSLDLTDNLIESIPESIAKLPALKELNLTDNKIK 738

Query: 186 DIPDTFGDL 194
             P     L
Sbjct: 739 VWPKCMAVL 747



 Score = 43.9 bits (102), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 46/180 (25%), Positives = 77/180 (42%), Gaps = 30/180 (16%)

Query: 149 PTLKYLYLGNNSLNHVPREINKLC-----------------------KLHVLSLGGNSLT 185
           P   Y  L  N L H+ R  NKL                           VL    N + 
Sbjct: 22  PGSTYAALPKNVLRHMKRHSNKLTVELDTVNIKVLPEEIYANEEVAMMTSVLHAQNNKIK 81

Query: 186 DIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE 245
            IP +   L  L  + + +N + +LPAS++ LK L SL + +N+L+ LP  I      + 
Sbjct: 82  KIPRSISALQSLYEVDMRNNVIGALPASVAKLKKLSSLNVSDNRLKALPKTIHK----AS 137

Query: 246 KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKV 305
            L++  + NNK++ LP   I    ++ L +  N   I+ +    Y+ P  L+++   ++V
Sbjct: 138 GLETCDVSNNKIKKLPKN-IGQSNMTSLDVSQN--SIKILPKSIYRLPRSLDVSGNQIEV 194


>gi|395735872|ref|XP_003776656.1| PREDICTED: protein LAP2 isoform 2 [Pongo abelii]
          Length = 1419

 Score =  100 bits (250), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 132/288 (45%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|355686423|gb|AER98051.1| erbb2 interacting protein [Mustela putorius furo]
          Length = 1093

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 147 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTF--IP 204

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 205 GFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKI 264

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+S+  L  +++    +N L+ LP EI +
Sbjct: 265 DENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGS 324

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 325 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 361



 Score = 95.9 bits (237), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 133/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLD---------SETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 4   TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 61

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 62  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNL 121

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 122 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 181

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    + GN LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 182 EVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLL 241

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 242 SSNSLQQLPETIGSLKNVT----TLKIDENQLMYLPDSIGGLVSIEEL 285


>gi|344279012|ref|XP_003411285.1| PREDICTED: leucine-rich repeat-containing protein 40-like
           [Loxodonta africana]
          Length = 602

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/224 (37%), Positives = 124/224 (55%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFP-DNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           N+D     + NLSF   +   + T+L  L +SNN++  +   +   P L+ L   +N LT
Sbjct: 59  NVDIPEEANQNLSFGATERWWEQTDLTKLIISNNKLQSITDDLRLLPALTVLDIHDNQLT 118

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLP  +  L+NL+  N+S N+L+  P +I ++  LK LYL +N L  +P    +L  L
Sbjct: 119 --SLPSAIRELENLQKLNVSHNKLKILPEEITNLRNLKGLYLQHNELTCIPEGFEQLSSL 176

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +P +F  L  L  L LS NQL+SLPA IS +K LK L  ++N L T+P
Sbjct: 177 EDLDLSSNRLTTVPVSFSALSSLVRLNLSSNQLKSLPAEISRMKKLKHLDCNSNLLETIP 236

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           +E+  +    E L+ L L  NKL +LP +  + + L EL + +N
Sbjct: 237 SELAGM----ESLELLYLRRNKLHSLP-QFPSCRLLKELHVGEN 275



 Score = 89.4 bits (220), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 82/234 (35%), Positives = 121/234 (51%), Gaps = 32/234 (13%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           ++++LP    N +  N+  L L HN L+  P+   + ++L  LDLS+NR+T +P + +  
Sbjct: 139 KLKILPEEITNLR--NLKGLYLQHNELTCIPEGFEQLSSLEDLDLSSNRLTTVPVSFS-- 194

Query: 102 PLSTLIARNNLLTAE--SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
            LS+L+ R NL + +  SLP ++S +K LK  + + N LE  P ++  + +L+ LYL  N
Sbjct: 195 ALSSLV-RLNLSSNQLKSLPAEISRMKKLKHLDCNSNLLETIPSELAGMESLELLYLRRN 253

Query: 160 SLNHVPR---------------EINKLCKLH--------VLSLGGNSLTDIPDTFGDLYQ 196
            L+ +P+               +I  L   H        VL L  N L  +PD    L  
Sbjct: 254 KLHSLPQFPSCRLLKELHVGENQIEMLGAEHLKHLNSILVLELRDNKLKSVPDEITLLQS 313

Query: 197 LEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
           LE L LS+N + SLP S+ NL  LK L L  N LRT+  EII  K   E LK L
Sbjct: 314 LERLDLSNNDISSLPYSLGNLH-LKFLALEGNPLRTIRREIIN-KGTQEVLKYL 365



 Score = 84.3 bits (207), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 79/229 (34%), Positives = 118/229 (51%), Gaps = 14/229 (6%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           EN+  L + HN L   P+  +   NL+ L L +N +T +P+       L  L   +N LT
Sbjct: 128 ENLQKLNVSHNKLKILPEEITNLRNLKGLYLQHNELTCIPEGFEQLSSLEDLDLSSNRLT 187

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             ++P   S L +L   NLS NQL+  P +I  +  LK+L   +N L  +P E+  +  L
Sbjct: 188 --TVPVSFSALSSLVRLNLSSNQLKSLPAEISRMKKLKHLDCNSNLLETIPSELAGMESL 245

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLL---LHNNKLR 231
            +L L  N L  +P  F     L+ L + +NQ+E L A   +LK L S+L   L +NKL+
Sbjct: 246 ELLYLRRNKLHSLPQ-FPSCRLLKELHVGENQIEMLGA--EHLKHLNSILVLELRDNKLK 302

Query: 232 TLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           ++P EI  L    + L+ L L NN + +LP  +  L  L  L+L  NPL
Sbjct: 303 SVPDEITLL----QSLERLDLSNNDISSLPYSLGNLH-LKFLALEGNPL 346



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 104/199 (52%), Gaps = 9/199 (4%)

Query: 74  NASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE--SLPKDMSNLKNL-KV 130
           N    T L++LD S+ + T +P  + +   S ++   N    E   +PK +  LK +   
Sbjct: 394 NVHAITTLKTLDYSDKQKTSIPDEVFDAVKSHIVTSVNFSKNELCEIPKRIVELKEMVSD 453

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NLS N+L    +++  +  L +L L NN LN +P E+  L +L +++L  N    +P+ 
Sbjct: 454 VNLSFNKLSFVSLELCMLQKLTFLDLRNNFLNSLPEEMESLIRLQMINLSFNRFKILPEV 513

Query: 191 FGDLYQLEALILSDNQLESL-PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
              +  LE +++S+NQ+ S+ P  +  ++ L +L L NN L  +P E+    C++  L++
Sbjct: 514 LYRIPTLETVLISNNQVGSVDPQKMKMMENLTTLDLQNNDLLQIPPELGN--CVN--LRT 569

Query: 250 LLLHNNKLRTLPTEIITLK 268
           LLL  N  R +P   I +K
Sbjct: 570 LLLDGNPFR-VPRAAILMK 587



 Score = 50.4 bits (119), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 75/283 (26%), Positives = 126/283 (44%), Gaps = 19/283 (6%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           QIE+L   ++ K   +I  L L  N L   PD  +   +L  LDLSNN I+ LP ++ N 
Sbjct: 276 QIEML-GAEHLKHLNSILVLELRDNKLKSVPDEITLLQSLERLDLSNNDISSLPYSLGNL 334

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFN-LSGNQLEQFPIQILDIPTLKYLYLGNNS 160
            L  L    N L   ++ +++ N    +V   L     +  P Q   +          + 
Sbjct: 335 HLKFLALEGNPL--RTIRREIINKGTQEVLKYLRSKIRDDRPTQSDSVTETAMTLPSESR 392

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQ---LEALILSDNQLESLPASISNL 217
           +N     ++ +  L  L       T IPD   D  +   + ++  S N+L  +P  I  L
Sbjct: 393 VN-----VHAITTLKTLDYSDKQKTSIPDEVFDAVKSHIVTSVNFSKNELCEIPKRIVEL 447

Query: 218 K-MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           K M+  + L  NKL  +  E+    C+ +KL  L L NN L +LP E+ +L  L  ++L 
Sbjct: 448 KEMVSDVNLSFNKLSFVSLEL----CMLQKLTFLDLRNNFLNSLPEEMESLIRLQMINLS 503

Query: 277 DNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQNL 319
            N    + + ++ Y+ P+L  +     +V  +D  +  + +NL
Sbjct: 504 FNRF--KILPEVLYRIPTLETVLISNNQVGSVDPQKMKMMENL 544



 Score = 41.6 bits (96), Expect = 0.64,   Method: Compositional matrix adjust.
 Identities = 32/105 (30%), Positives = 52/105 (49%), Gaps = 3/105 (2%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKD 121
           L +N L+  P+       L+ ++LS NR   LP+ +   P L T++  NN + +   P+ 
Sbjct: 479 LRNNFLNSLPEEMESLIRLQMINLSFNRFKILPEVLYRIPTLETVLISNNQVGSVD-PQK 537

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPR 166
           M  ++NL   +L  N L Q P ++ +   L+ L L  N    VPR
Sbjct: 538 MKMMENLTTLDLQNNDLLQIPPELGNCVNLRTLLLDGNPF-RVPR 581


>gi|441658612|ref|XP_004091272.1| PREDICTED: protein LAP2 [Nomascus leucogenys]
          Length = 1418

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 132/288 (45%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|395735876|ref|XP_003776658.1| PREDICTED: protein LAP2 isoform 4 [Pongo abelii]
          Length = 1346

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 94.0 bits (232), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 132/288 (45%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTALPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|345802228|ref|XP_547338.3| PREDICTED: leucine-rich repeat-containing protein 40 [Canis lupus
           familiaris]
          Length = 631

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/228 (36%), Positives = 124/228 (54%), Gaps = 9/228 (3%)

Query: 57  NIDTLLLYHNNLSF-FPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLT 114
           N+D     + NLSF   +   + T+L  L LS+N++  L   +   P L+ L   +N LT
Sbjct: 88  NVDVPEEANQNLSFSAAERWWEQTDLTKLILSSNQLQSLTDDLRLLPALTVLDIHDNQLT 147

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLP  +  L+NL+  N+S N+L+  P +I ++  LK LYL +N L  +P    +L  L
Sbjct: 148 --SLPSAIRELENLQKLNVSHNKLQILPEEITNLRNLKGLYLQHNELTRIPEGFEQLFNL 205

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L +  N LT +P +F  L  L  L +S NQL+SLP  IS +K LK L  ++N L T+P
Sbjct: 206 EDLDISNNRLTTVPASFSSLSSLVRLNISSNQLKSLPVEISGMKRLKHLDCNSNLLETVP 265

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
            E+  +    E L+ L L  NKLR LP E  + + L EL + +N + I
Sbjct: 266 PELANM----ESLELLYLRRNKLRFLP-EFPSCRLLKELHVGENQIEI 308



 Score = 92.0 bits (227), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 79/227 (34%), Positives = 120/227 (52%), Gaps = 10/227 (4%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLT 114
           EN+  L + HN L   P+  +   NL+ L L +N +T +P+     F L  L   NN LT
Sbjct: 157 ENLQKLNVSHNKLQILPEEITNLRNLKGLYLQHNELTRIPEGFEQLFNLEDLDISNNRLT 216

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             ++P   S+L +L   N+S NQL+  P++I  +  LK+L   +N L  VP E+  +  L
Sbjct: 217 --TVPASFSSLSSLVRLNISSNQLKSLPVEISGMKRLKHLDCNSNLLETVPPELANMESL 274

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESL-PASISNLKMLKSLLLHNNKLRTL 233
            +L L  N L  +P+ F     L+ L + +NQ+E L P  + +L  +  L L +NKLR++
Sbjct: 275 ELLYLRRNKLRFLPE-FPSCRLLKELHVGENQIEILGPEHLKHLNSILVLDLRDNKLRSV 333

Query: 234 PTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           P EI  L    + L+ L L NN + +LP  +  L  L  L+L  NPL
Sbjct: 334 PDEITLL----QSLERLDLSNNDISSLPCSLGKLP-LKFLALEGNPL 375



 Score = 88.2 bits (217), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 82/240 (34%), Positives = 119/240 (49%), Gaps = 41/240 (17%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           ++++LP    N +  N+  L L HN L+  P+   +  NL  LD+SNNR+T +P + ++ 
Sbjct: 168 KLQILPEEITNLR--NLKGLYLQHNELTRIPEGFEQLFNLEDLDISNNRLTTVPASFSS- 224

Query: 102 PLSTL----IARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG 157
            LS+L    I+ N L   +SLP ++S +K LK  + + N LE  P ++ ++ +L+ LYL 
Sbjct: 225 -LSSLVRLNISSNQL---KSLPVEISGMKRLKHLDCNSNLLETVPPELANMESLELLYLR 280

Query: 158 NNSLN--------------HV---------PREINKLCKLHVLSLGGNSLTDIPDTFGDL 194
            N L               HV         P  +  L  + VL L  N L  +PD    L
Sbjct: 281 RNKLRFLPEFPSCRLLKELHVGENQIEILGPEHLKHLNSILVLDLRDNKLRSVPDEITLL 340

Query: 195 YQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEII------TLKCLSEKLK 248
             LE L LS+N + SLP S+  L  LK L L  N LRT+  EII       LK L  K+K
Sbjct: 341 QSLERLDLSNNDISSLPCSLGKLP-LKFLALEGNPLRTIRREIINKGTQEVLKYLRSKIK 399



 Score = 64.3 bits (155), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 59/199 (29%), Positives = 101/199 (50%), Gaps = 9/199 (4%)

Query: 74  NASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE--SLPKDMSNLKNL-KV 130
           N      L+ LD S+ + T +P  + +   S +I   N    +   +PK +  LK +   
Sbjct: 423 NVHAIITLKILDYSDKQTTLIPDEVFDAVKSNIITSVNFSKNQLCEIPKRIVELKEMVSD 482

Query: 131 FNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDT 190
            NLS N+L    +++  +  L +L L NN LN +P E+  L +L  ++L  N    +PD 
Sbjct: 483 VNLSFNKLSFISLELCMLQKLTFLDLRNNFLNSLPEEMESLIRLQTINLSFNRFKILPDV 542

Query: 191 FGDLYQLEALILSDNQLESL-PASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
              +  LE +++S+NQ+ S+ P  +  ++ L +L L NN L  +P E+    C++  L++
Sbjct: 543 LYHIPTLETILISNNQVGSVDPQKMKAMENLITLDLQNNDLLQIPPELGN--CVN--LRT 598

Query: 250 LLLHNNKLRTLPTEIITLK 268
           LLL  N  R +P   I +K
Sbjct: 599 LLLDGNPFR-VPRAAILMK 616



 Score = 52.0 bits (123), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 84/302 (27%), Positives = 127/302 (42%), Gaps = 55/302 (18%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           QIE+L   ++ K   +I  L L  N L   PD  +   +L  LDLSNN I+ LP ++   
Sbjct: 305 QIEIL-GPEHLKHLNSILVLDLRDNKLRSVPDEITLLQSLERLDLSNNDISSLPCSLGKL 363

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPT---LKYLYL-- 156
           PL                         K   L GN L     +I++  T   LKYL    
Sbjct: 364 PL-------------------------KFLALEGNPLRTIRREIINKGTQEVLKYLRSKI 398

Query: 157 ---GNNSLNHV-------PRE----INKLCKLHVLSLGGNSLTDIPDTFGDLYQ---LEA 199
              G N  + V       P E    ++ +  L +L       T IPD   D  +   + +
Sbjct: 399 KDDGPNQSDSVVETAMTLPSESRVNVHAIITLKILDYSDKQTTLIPDEVFDAVKSNIITS 458

Query: 200 LILSDNQLESLPASISNLK-MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
           +  S NQL  +P  I  LK M+  + L  NKL  +  E+    C+ +KL  L L NN L 
Sbjct: 459 VNFSKNQLCEIPKRIVELKEMVSDVNLSFNKLSFISLEL----CMLQKLTFLDLRNNFLN 514

Query: 259 TLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQEHLPQN 318
           +LP E+ +L  L  ++L  N    + + D+ Y  P+L  +     +V  +D  +    +N
Sbjct: 515 SLPEEMESLIRLQTINLSFNRF--KILPDVLYHIPTLETILISNNQVGSVDPQKMKAMEN 572

Query: 319 LV 320
           L+
Sbjct: 573 LI 574



 Score = 47.4 bits (111), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 63/153 (41%), Gaps = 25/153 (16%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDM 122
           L  N LSF          L  LDL NN +                         SLP++M
Sbjct: 485 LSFNKLSFISLELCMLQKLTFLDLRNNFLN------------------------SLPEEM 520

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHV-PREINKLCKLHVLSLGG 181
            +L  L+  NLS N+ +  P  +  IPTL+ + + NN +  V P+++  +  L  L L  
Sbjct: 521 ESLIRLQTINLSFNRFKILPDVLYHIPTLETILISNNQVGSVDPQKMKAMENLITLDLQN 580

Query: 182 NSLTDIPDTFGDLYQLEALILSDNQLESLPASI 214
           N L  IP   G+   L  L+L  N      A+I
Sbjct: 581 NDLLQIPPELGNCVNLRTLLLDGNPFRVPRAAI 613


>gi|242006348|ref|XP_002424013.1| leucine-rich repeat protein SHOC-2, putative [Pediculus humanus
           corporis]
 gi|212507305|gb|EEB11275.1| leucine-rich repeat protein SHOC-2, putative [Pediculus humanus
           corporis]
          Length = 608

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 131/244 (53%), Gaps = 11/244 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNA-SKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLL 113
           ++  + +  NN++ +P    ++FTN+ S++L +N I  +P  I      L+ L  + N L
Sbjct: 355 DLTAITISRNNMTSYPSGGPAQFTNVHSINLEHNLIDKIPYGIFTRAKNLAKLNMKENQL 414

Query: 114 TAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCK 173
           T  SLP D+    N+   NL+ N+L + P  I  + +L+ L L NN L  +P  +  L K
Sbjct: 415 T--SLPLDIGTWTNMVELNLATNKLTKIPEDIQCLESLEVLILSNNMLKRIPAGMGNLRK 472

Query: 174 LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           L +L L  N +  +P+  G L  L  LI+  NQ+  LP +I +L  L  L + +N L +L
Sbjct: 473 LRILDLEENRIEVLPNEIGFLRDLTKLIIHSNQISVLPRAIGHLSSLVYLSVGDNNLTSL 532

Query: 234 PTEIITLKCLSEKLKSLLLHNN-KLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKP 292
           P EI TL    EKL+SL +++N  L  LP E+   K L  +S+ + PL  +  +++    
Sbjct: 533 PEEIGTL----EKLESLYVNDNLNLHHLPFELALCKNLHIMSIENCPLS-QIPAEIVQGG 587

Query: 293 PSLL 296
           PSL+
Sbjct: 588 PSLV 591



 Score = 91.7 bits (226), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 61/187 (32%), Positives = 105/187 (56%), Gaps = 4/187 (2%)

Query: 54  KPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNL 112
           + +N+  L +  N L+  P +   +TN+  L+L+ N++T +P+ I     L  LI  NN+
Sbjct: 400 RAKNLAKLNMKENQLTSLPLDIGTWTNMVELNLATNKLTKIPEDIQCLESLEVLILSNNM 459

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLC 172
           L  + +P  M NL+ L++ +L  N++E  P +I  +  L  L + +N ++ +PR I  L 
Sbjct: 460 L--KRIPAGMGNLRKLRILDLEENRIEVLPNEIGFLRDLTKLIIHSNQISVLPRAIGHLS 517

Query: 173 KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDN-QLESLPASISNLKMLKSLLLHNNKLR 231
            L  LS+G N+LT +P+  G L +LE+L ++DN  L  LP  ++  K L  + + N  L 
Sbjct: 518 SLVYLSVGDNNLTSLPEEIGTLEKLESLYVNDNLNLHHLPFELALCKNLHIMSIENCPLS 577

Query: 232 TLPTEII 238
            +P EI+
Sbjct: 578 QIPAEIV 584



 Score = 75.5 bits (184), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 117/266 (43%), Gaps = 38/266 (14%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIA-RNNLLTA 115
           N+ T  + HN L   P    +   L +LDL +N +  +P+ I N  L T +  R N L  
Sbjct: 262 NLTTFDVSHNQLEHLPIEIGQCVQLSTLDLQHNELLDIPETIGNLQLLTRLGLRYNRLV- 320

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQIL-------------------------DIPT 150
            ++PK + N   +  FN+ GN +   P  +L                             
Sbjct: 321 -TVPKSLCNCSRMDEFNVEGNSISNLPEGLLASLSDLTAITISRNNMTSYPSGGPAQFTN 379

Query: 151 LKYLYLGNNSLNHVPREINKLCK-LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLES 209
           +  + L +N ++ +P  I    K L  L++  N LT +P   G    +  L L+ N+L  
Sbjct: 380 VHSINLEHNLIDKIPYGIFTRAKNLAKLNMKENQLTSLPLDIGTWTNMVELNLATNKLTK 439

Query: 210 LPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKC 269
           +P  I  L+ L+ L+L NN L+ +P  +  L+    KL+ L L  N++  LP EI  L+ 
Sbjct: 440 IPEDIQCLESLEVLILSNNMLKRIPAGMGNLR----KLRILDLEENRIEVLPNEIGFLRD 495

Query: 270 LSELSLRDN-----PLVIRFVSDMTY 290
           L++L +  N     P  I  +S + Y
Sbjct: 496 LTKLIIHSNQISVLPRAIGHLSSLVY 521



 Score = 70.5 bits (171), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 70/224 (31%), Positives = 109/224 (48%), Gaps = 7/224 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           +  L L  ++++  P +    T+L    L  N++  LP  I     L TL    N LT  
Sbjct: 125 VSRLDLSKSSITQLPSSVRDLTHLEEFYLYGNKLYSLPSEIGCLVNLQTLALSENSLT-- 182

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
           SLP+ + +LK+LKV +L  N+L + P  +  + TL  L+L  N +  V  +I  L  L +
Sbjct: 183 SLPESLVSLKSLKVLDLRHNKLNEIPEVVYKLTTLTTLFLRFNRIRVVDDDIRNLSNLTM 242

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           LSL  N + ++P   G L  L    +S NQLE LP  I     L +L L +N+L  +P  
Sbjct: 243 LSLRENKIKELPPGIGCLINLTTFDVSHNQLEHLPIEIGQCVQLSTLDLQHNELLDIPET 302

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           I  L+ L+     L L  N+L T+P  +     + E ++  N +
Sbjct: 303 IGNLQLLTR----LGLRYNRLVTVPKSLCNCSRMDEFNVEGNSI 342



 Score = 63.2 bits (152), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 56/165 (33%), Positives = 84/165 (50%), Gaps = 13/165 (7%)

Query: 34  LDSETLATQIEL-LPNNDYNKKPENI------DTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           LD  T    +EL L  N   K PE+I      + L+L +N L   P        LR LDL
Sbjct: 419 LDIGTWTNMVELNLATNKLTKIPEDIQCLESLEVLILSNNMLKRIPAGMGNLRKLRILDL 478

Query: 87  SNNRITHLPQAITNF-PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQI 145
             NRI  LP  I     L+ LI  +N ++   LP+ + +L +L   ++  N L   P +I
Sbjct: 479 EENRIEVLPNEIGFLRDLTKLIIHSNQISV--LPRAIGHLSSLVYLSVGDNNLTSLPEEI 536

Query: 146 LDIPTLKYLYLGNN-SLNHVPREINKLCK-LHVLSLGGNSLTDIP 188
             +  L+ LY+ +N +L+H+P E+  LCK LH++S+    L+ IP
Sbjct: 537 GTLEKLESLYVNDNLNLHHLPFEL-ALCKNLHIMSIENCPLSQIP 580



 Score = 38.9 bits (89), Expect = 4.7,   Method: Compositional matrix adjust.
 Identities = 31/116 (26%), Positives = 57/116 (49%), Gaps = 3/116 (2%)

Query: 42  QIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
           +IE+LPN     +  ++  L+++ N +S  P      ++L  L + +N +T LP+ I   
Sbjct: 482 RIEVLPNEIGFLR--DLTKLIIHSNQISVLPRAIGHLSSLVYLSVGDNNLTSLPEEIGTL 539

Query: 102 PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILD-IPTLKYLYL 156
                +  N+ L    LP +++  KNL + ++    L Q P +I+   P+L   YL
Sbjct: 540 EKLESLYVNDNLNLHHLPFELALCKNLHIMSIENCPLSQIPAEIVQGGPSLVIHYL 595


>gi|358679318|ref|NP_001240628.1| protein LAP2 isoform 8 [Homo sapiens]
          Length = 1419

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 134/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI-ARNNLLTA----------- 115
           L+  P + +   NLR LD+S N I   P+ I N  + T++ A  N ++            
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 116 ----------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                     E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|358679323|ref|NP_001240630.1| protein LAP2 isoform 9 [Homo sapiens]
          Length = 1367

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 134/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI-ARNNLLTA----------- 115
           L+  P + +   NLR LD+S N I   P+ I N  + T++ A  N ++            
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 116 ----------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                     E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|194388158|dbj|BAG65463.1| unnamed protein product [Homo sapiens]
          Length = 1346

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 134/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLD---------SETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI-ARNNLLTA----------- 115
           L+  P + +   NLR LD+S N I   P+ I N  + T++ A  N ++            
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 116 ----------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                     E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|114599987|ref|XP_001162804.1| PREDICTED: protein LAP2 isoform 4 [Pan troglodytes]
 gi|397514425|ref|XP_003827488.1| PREDICTED: protein LAP2 isoform 1 [Pan paniscus]
 gi|410217134|gb|JAA05786.1| erbb2 interacting protein [Pan troglodytes]
 gi|410217138|gb|JAA05788.1| erbb2 interacting protein [Pan troglodytes]
 gi|410260628|gb|JAA18280.1| erbb2 interacting protein [Pan troglodytes]
 gi|410300756|gb|JAA28978.1| erbb2 interacting protein [Pan troglodytes]
 gi|410354909|gb|JAA44058.1| erbb2 interacting protein [Pan troglodytes]
          Length = 1371

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 134/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI-ARNNLLTA----------- 115
           L+  P + +   NLR LD+S N I   P+ I N  + T++ A  N ++            
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 116 ----------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                     E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|334325168|ref|XP_001366860.2| PREDICTED: protein LAP2 isoform 1 [Monodelphis domestica]
          Length = 1448

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/219 (33%), Positives = 111/219 (50%), Gaps = 7/219 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N ++     I    +L+ L L +NSL  +P  I  L KL  L +
Sbjct: 224 GLIGSLKQLTYLDVSKNNIDTVEEGISGCESLQDLLLSSNSLQQLPESIGLLKKLTTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  +++    +N L+ LP EI  
Sbjct: 284 DENQLMYLPDSIGGLISIEELDCSFNEIEALPSSIGQLSNIRTFAADHNYLQQLPPEIGF 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            K ++     L LH+NKL TLP E+  ++ L  ++L DN
Sbjct: 344 WKHVT----VLFLHSNKLETLPEEMGDMQKLKVINLSDN 378



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 133/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    + GN LT IP   G L QL  L +S N ++++   IS  + L+ LLL
Sbjct: 201 EVLEQLNGLKEFWMDGNRLTFIPGLIGSLKQLTYLDVSKNNIDTVEEGISGCESLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I  LK    KL +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPESIGLLK----KLTTLKIDENQLMYLPDSIGGLISIEEL 304



 Score = 68.9 bits (167), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 60/229 (26%), Positives = 108/229 (47%), Gaps = 15/229 (6%)

Query: 41  TQIELL--PNNDYNKKPENIDTL------LLYHNNLSFFPDNASKFTNLRSLDLSNNRIT 92
           TQ+E L   +N++ + PE ++ L       +  N L+F P        L  LD+S N I 
Sbjct: 184 TQLERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTFIPGLIGSLKQLTYLDVSKNNID 243

Query: 93  HLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
            + + I+    L  L+  +N L  + LP+ +  LK L    +  NQL   P  I  + ++
Sbjct: 244 TVEEGISGCESLQDLLLSSNSL--QQLPESIGLLKKLTTLKIDENQLMYLPDSIGGLISI 301

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           + L    N +  +P  I +L  +   +   N L  +P   G    +  L L  N+LE+LP
Sbjct: 302 EELDCSFNEIEALPSSIGQLSNIRTFAADHNYLQQLPPEIGFWKHVTVLFLHSNKLETLP 361

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTL 260
             + +++ LK + L +N+++ LP     L    ++L ++ L +N+ + L
Sbjct: 362 EEMGDMQKLKVINLSDNRMKNLPFSFTKL----QQLTAMWLSDNQSKPL 406


>gi|218248723|ref|YP_002374094.1| small GTP-binding protein [Cyanothece sp. PCC 8801]
 gi|218169201|gb|ACK67938.1| small GTP-binding protein [Cyanothece sp. PCC 8801]
          Length = 937

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/204 (39%), Positives = 110/204 (53%), Gaps = 8/204 (3%)

Query: 81  LRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQL 138
           + +LDL+  R+T LP  I      L  L  RNN L  ++LP ++  L++L    L+ N L
Sbjct: 20  VETLDLTFKRLTSLPPEIGQLKNHLKFLDLRNNKL--KTLPPEIGTLQSLNALFLTTNYL 77

Query: 139 EQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLE 198
           E+ P +I ++ TL  L L  N L+H+P+E   L  L  L L  N L  +P  FG L  LE
Sbjct: 78  EELPPEIGNLSTLHRLSLTENKLSHLPQEFGNLIGLTELYLANNQLNSLPTEFGRLINLE 137

Query: 199 ALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLR 258
            L LS+NQL  LP    NLK L  L L +NKL +L  EI  LK LS+    L +  N+L 
Sbjct: 138 RLSLSNNQLTLLPEEFGNLKKLSWLDLKSNKLESLNPEIRDLKQLSK----LNISYNQLT 193

Query: 259 TLPTEIITLKCLSELSLRDNPLVI 282
            LP +I  ++ L EL+   N L I
Sbjct: 194 NLPPQISEVESLIELNASYNQLTI 217



 Score = 90.1 bits (222), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 85/232 (36%), Positives = 119/232 (51%), Gaps = 28/232 (12%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L +N L+  P    +  NL  L LSNN++T LP+   N   LS L  ++N L  ESL 
Sbjct: 116 LYLANNQLNSLPTEFGRLINLERLSLSNNQLTLLPEEFGNLKKLSWLDLKSNKL--ESLN 173

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYL------------YLG---------- 157
            ++ +LK L   N+S NQL   P QI ++ +L  L             LG          
Sbjct: 174 PEIRDLKQLSKLNISYNQLTNLPPQISEVESLIELNASYNQLTILPGELGELSNLDLLNL 233

Query: 158 -NNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
            +N +  +PREI +L  L+ L+L  N+L  +P   G+L QL  L LS N L+++P+ I  
Sbjct: 234 SHNKIEKLPREIGQLKNLNTLNLIYNNLYYLPSQIGELSQLIDLRLSHNYLDNIPSEIEK 293

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLK 268
           L+ L +L L  NKL+ LPT II L    + L  L L  N L ++P EII  K
Sbjct: 294 LRKLTTLYLGYNKLKILPTGIIQLVRFGQ-LTILDLKEN-LLSIPPEIIWSK 343



 Score = 87.0 bits (214), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 84/243 (34%), Positives = 114/243 (46%), Gaps = 31/243 (12%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTN-LRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           ++TL L    L+  P    +  N L+ LDL NN++  LP  I     L+ L    N L  
Sbjct: 20  VETLDLTFKRLTSLPPEIGQLKNHLKFLDLRNNKLKTLPPEIGTLQSLNALFLTTNYL-- 77

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           E LP ++ NL  L   +L+ N+L   P +  ++  L  LYL NN LN +P E  +L  L 
Sbjct: 78  EELPPEIGNLSTLHRLSLTENKLSHLPQEFGNLIGLTELYLANNQLNSLPTEFGRLINLE 137

Query: 176 VLSLGGNSLTDIPDTFG-----------------------DLYQLEALILSDNQLESLPA 212
            LSL  N LT +P+ FG                       DL QL  L +S NQL +LP 
Sbjct: 138 RLSLSNNQLTLLPEEFGNLKKLSWLDLKSNKLESLNPEIRDLKQLSKLNISYNQLTNLPP 197

Query: 213 SISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSE 272
            IS ++ L  L    N+L  LP E+  L  L     S    +NK+  LP EI  LK L+ 
Sbjct: 198 QISEVESLIELNASYNQLTILPGELGELSNLDLLNLS----HNKIEKLPREIGQLKNLNT 253

Query: 273 LSL 275
           L+L
Sbjct: 254 LNL 256



 Score = 82.8 bits (203), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 79/226 (34%), Positives = 113/226 (50%), Gaps = 7/226 (3%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLT 114
           ++++ L L  N L   P      + L  L L+ N+++HLPQ   N   L+ L   NN L 
Sbjct: 65  QSLNALFLTTNYLEELPPEIGNLSTLHRLSLTENKLSHLPQEFGNLIGLTELYLANNQLN 124

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
             SLP +   L NL+  +LS NQL   P +  ++  L +L L +N L  +  EI  L +L
Sbjct: 125 --SLPTEFGRLINLERLSLSNNQLTLLPEEFGNLKKLSWLDLKSNKLESLNPEIRDLKQL 182

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L++  N LT++P    ++  L  L  S NQL  LP  +  L  L  L L +NK+  LP
Sbjct: 183 SKLNISYNQLTNLPPQISEVESLIELNASYNQLTILPGELGELSNLDLLNLSHNKIEKLP 242

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            EI  LK L+    +L L  N L  LP++I  L  L +L L  N L
Sbjct: 243 REIGQLKNLN----TLNLIYNNLYYLPSQIGELSQLIDLRLSHNYL 284



 Score = 66.6 bits (161), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/145 (40%), Positives = 70/145 (48%), Gaps = 5/145 (3%)

Query: 161 LNHVPREINKLCK-LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
           L  +P EI +L   L  L L  N L  +P   G L  L AL L+ N LE LP  I NL  
Sbjct: 30  LTSLPPEIGQLKNHLKFLDLRNNKLKTLPPEIGTLQSLNALFLTTNYLEELPPEIGNLST 89

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L  L L  NKL  LP E   L  L+E    L L NN+L +LPTE   L  L  LSL +N 
Sbjct: 90  LHRLSLTENKLSHLPQEFGNLIGLTE----LYLANNQLNSLPTEFGRLINLERLSLSNNQ 145

Query: 280 LVIRFVSDMTYKPPSLLELASRTLK 304
           L +        K  S L+L S  L+
Sbjct: 146 LTLLPEEFGNLKKLSWLDLKSNKLE 170


>gi|428175990|gb|EKX44877.1| hypothetical protein GUITHDRAFT_87300 [Guillardia theta CCMP2712]
          Length = 618

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 84/244 (34%), Positives = 118/244 (48%), Gaps = 16/244 (6%)

Query: 46  LPNNDYNKKPENIDTLLLY-----HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN 100
           L  N  N  P N   L L       NN   FP    + TNL  +DL++NR+T LP  I  
Sbjct: 347 LQENKLNSLPSNFSELPLMSINLSRNNFEIFPPPLERMTNLEHIDLTDNRLTRLPFMIGR 406

Query: 101 FPLST--LIARNNLLTAESLPKDMSNL--KNLKVFNLSGNQLEQFPIQILDIPTLKYLYL 156
           F  +T  L+  N +     LP  +  +   +L+V NLS N L   P  + +I  L+ + L
Sbjct: 407 FVYATAILLGGNQV---SVLPDSLGAMGEASLQVINLSKNGLFDLPSALFNIKRLERICL 463

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
             N+L  +P ++  L KL  L L  N LT +P   G+L  L AL L  N+L+ +P ++  
Sbjct: 464 SGNNLRELPNQLCVLKKLKELWLDHNQLTYLPSRLGELVSLSALYLHSNRLKMIPKNLVE 523

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           LK LK L L  N+LR LP +   L     +L+ L L +N+   L  E      L  L+ R
Sbjct: 524 LKGLKVLTLSGNELRELPWDFHRLS----ELEELWLDDNQFEALQLERSLFPRLQFLTFR 579

Query: 277 DNPL 280
            NPL
Sbjct: 580 HNPL 583



 Score = 91.3 bits (225), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 70/217 (32%), Positives = 113/217 (52%), Gaps = 7/217 (3%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAI-TNFPLSTLIARNNLLTAESLPKDMS 123
           HN L   P +   F  L + DLS+N +T LP  +     L  L+  +N+LT  ++ K++ 
Sbjct: 142 HNALRSLPASIKDFKRLLNFDLSHNHLTILPAEVGMLPLLDALLLPDNMLT--TIVKELG 199

Query: 124 NLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNS 183
              NL   +L GNQ+   P ++  + +L  + L +N +  +P  I +L  L +  +  N+
Sbjct: 200 GCVNLSHIDLIGNQVTYLPAELGKLRSLARVDLDSNQIGKIPNTIGRLQSLEIFLMQNNA 259

Query: 184 LTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCL 243
           L  IP++ G L  L+ L LSDN ++ LP SI ++  L  L L  N +  LP EI+ L   
Sbjct: 260 LDSIPESIGQLKSLQELDLSDNNIQLLPLSIGSISDLTELNLSANSISALPREIVVLT-- 317

Query: 244 SEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
             +L +    +N L TLP+ +  L  L+ L L++N L
Sbjct: 318 --RLVTFRYSSNNLLTLPSIVCKLTTLTSLDLQENKL 352



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 72/229 (31%), Positives = 105/229 (45%), Gaps = 30/229 (13%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTAESLPKD 121
           L  N LS  P +  K T L  L L +N+I+ LP  I N   L      +N L   SLP  
Sbjct: 94  LSRNQLSDCPVHLCKLTLLEELILDHNKISVLPNKIGNCGALRHFSISHNAL--RSLPAS 151

Query: 122 MSNLKNLKVFNLSGNQLEQFPIQI-----------------------LDIPTLKYLYLGN 158
           + + K L  F+LS N L   P ++                            L ++ L  
Sbjct: 152 IKDFKRLLNFDLSHNHLTILPAEVGMLPLLDALLLPDNMLTTIVKELGGCVNLSHIDLIG 211

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N + ++P E+ KL  L  + L  N +  IP+T G L  LE  ++ +N L+S+P SI  LK
Sbjct: 212 NQVTYLPAELGKLRSLARVDLDSNQIGKIPNTIGRLQSLEIFLMQNNALDSIPESIGQLK 271

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITL 267
            L+ L L +N ++ LP  I ++  L+E    L L  N +  LP EI+ L
Sbjct: 272 SLQELDLSDNNIQLLPLSIGSISDLTE----LNLSANSISALPREIVVL 316



 Score = 76.3 bits (186), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 107/210 (50%), Gaps = 10/210 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+  + L  N +++ P    K  +L  +DL +N+I  +P  I     L   + +NN L  
Sbjct: 203 NLSHIDLIGNQVTYLPAELGKLRSLARVDLDSNQIGKIPNTIGRLQSLEIFLMQNNAL-- 260

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           +S+P+ +  LK+L+  +LS N ++  P+ I  I  L  L L  NS++ +PREI  L +L 
Sbjct: 261 DSIPESIGQLKSLQELDLSDNNIQLLPLSIGSISDLTELNLSANSISALPREIVVLTRLV 320

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNN-KLRTLP 234
                 N+L  +P     L  L +L L +N+L SLP++ S L ++   L  NN ++   P
Sbjct: 321 TFRYSSNNLLTLPSIVCKLTTLTSLDLQENKLNSLPSNFSELPLMSINLSRNNFEIFPPP 380

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
            E +T       L+ + L +N+L  LP  I
Sbjct: 381 LERMT------NLEHIDLTDNRLTRLPFMI 404



 Score = 75.9 bits (185), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 73/225 (32%), Positives = 107/225 (47%), Gaps = 12/225 (5%)

Query: 71  FPDNASKFTNLRSLDLSNNRITHLPQAITNFPL-STLIARNNLLTAESLPKDMSNLKNLK 129
            P+  +  T+L  L+LS N+++  P  +    L   LI  +N ++   LP  + N   L+
Sbjct: 79  MPNILTSLTSLTVLNLSRNQLSDCPVHLCKLTLLEELILDHNKISV--LPNKIGNCGALR 136

Query: 130 VFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPD 189
            F++S N L   P  I D   L    L +N L  +P E+  L  L  L L  N LT I  
Sbjct: 137 HFSISHNALRSLPASIKDFKRLLNFDLSHNHLTILPAEVGMLPLLDALLLPDNMLTTIVK 196

Query: 190 TFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKS 249
             G    L  + L  NQ+  LPA +  L+ L  + L +N++  +P  I  L    + L+ 
Sbjct: 197 ELGGCVNLSHIDLIGNQVTYLPAELGKLRSLARVDLDSNQIGKIPNTIGRL----QSLEI 252

Query: 250 LLLHNNKLRTLPTEIITLKCLSELSLRDN-----PLVIRFVSDMT 289
            L+ NN L ++P  I  LK L EL L DN     PL I  +SD+T
Sbjct: 253 FLMQNNALDSIPESIGQLKSLQELDLSDNNIQLLPLSIGSISDLT 297



 Score = 55.1 bits (131), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 44/141 (31%), Positives = 71/141 (50%), Gaps = 5/141 (3%)

Query: 46  LPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLS 104
           LP+  +N K   ++ + L  NNL   P+       L+ L L +N++T+LP  +     LS
Sbjct: 448 LPSALFNIK--RLERICLSGNNLRELPNQLCVLKKLKELWLDHNQLTYLPSRLGELVSLS 505

Query: 105 TLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHV 164
            L   +N L  + +PK++  LK LKV  LSGN+L + P     +  L+ L+L +N    +
Sbjct: 506 ALYLHSNRL--KMIPKNLVELKGLKVLTLSGNELRELPWDFHRLSELEELWLDDNQFEAL 563

Query: 165 PREINKLCKLHVLSLGGNSLT 185
             E +   +L  L+   N LT
Sbjct: 564 QLERSLFPRLQFLTFRHNPLT 584



 Score = 42.4 bits (98), Expect = 0.43,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 54/120 (45%), Gaps = 5/120 (4%)

Query: 164 VPREINKLC-KLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKS 222
           VP EI   C + + +S   N ++ I    G     + L  +DN+LES+   + NL  L  
Sbjct: 9   VPSEIAGFCSQPYKVSFAHNHISTISSEIGLFENAQTLCFNDNKLESIACELRNLTRLVR 68

Query: 223 LLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           L L  N   T+P  + +L  L+     L L  N+L   P  +  L  L EL L  N + +
Sbjct: 69  LDLEGNLFETMPNILTSLTSLT----VLNLSRNQLSDCPVHLCKLTLLEELILDHNKISV 124


>gi|426384524|ref|XP_004058812.1| PREDICTED: protein LAP2 isoform 1 [Gorilla gorilla gorilla]
          Length = 1371

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 134/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI-ARNNLLTA----------- 115
           L+  P + +   NLR LD+S N I   P+ I N  + T++ A  N ++            
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 116 ----------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                     E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|417406440|gb|JAA49878.1| Putative cytoskeletal regulator flightless-i [Desmodus rotundus]
          Length = 1417

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/221 (33%), Positives = 110/221 (49%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLNGLKEFWMDGNRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   + S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDFSKNNIEMVEEGISACENLQDLILSSNSLQQLPETIGSLKNVTTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  +++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLVSIEELDCSFNEVEALPSSIGQLTNIRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 94.4 bits (233), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 132/288 (45%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    + GN LT IP   G L QL  L  S N +E +   IS  + L+ L+L
Sbjct: 201 EVLEQLNGLKEFWMDGNRLTFIPGFIGSLKQLTYLDFSKNNIEMVEEGISACENLQDLIL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNVT----TLKIDENQLMYLPDSIGGLVSIEEL 304


>gi|338718816|ref|XP_001915867.2| PREDICTED: LOW QUALITY PROTEIN: protein LAP2 [Equus caballus]
          Length = 1374

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 110/221 (49%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  L  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLLSSNSLQQLPETIGSLKNLTTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  +++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLVSIEELDCSFNEIEALPSSIGQLTNIRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L   +L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVTNLSDNRL 380



 Score = 96.7 bits (239), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 133/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    + GN LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISACENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK L+    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNLT----TLKIDENQLMYLPDSIGGLVSIEEL 304


>gi|114599985|ref|XP_001162761.1| PREDICTED: protein LAP2 isoform 3 [Pan troglodytes]
 gi|397514427|ref|XP_003827489.1| PREDICTED: protein LAP2 isoform 2 [Pan paniscus]
          Length = 1412

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 134/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI-ARNNLLTA----------- 115
           L+  P + +   NLR LD+S N I   P+ I N  + T++ A  N ++            
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 116 ----------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                     E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|427722688|ref|YP_007069965.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
 gi|427354408|gb|AFY37131.1| small GTP-binding protein [Leptolyngbya sp. PCC 7376]
          Length = 1183

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 66/224 (29%), Positives = 113/224 (50%), Gaps = 28/224 (12%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAE 116
           N+  L LY+N +   PD+ +  +NL+ L L+ NRI  +P +                   
Sbjct: 210 NLQQLYLYNNQIKEIPDSLAALSNLQRLQLNFNRIKKIPDS------------------- 250

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
                ++ L +L+  +L+ NQ+ + P     +  L+ L LG+N +  +P    KL  L  
Sbjct: 251 -----LAKLASLQQLDLNINQISEIPDSFATLKNLQKLDLGSNQIKKIPDSFGKLASLQQ 305

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L+LG N +  IPD+FG L  L+ L LS N++E +P S + L  L+ L L+NN ++ +P  
Sbjct: 306 LNLGSNQIKKIPDSFGKLASLQQLNLSHNKIEEIPDSFATLVNLQQLYLYNNPIKEVPDS 365

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           + TL      L+ L   +N+++ +P  + TL  L +L +  N +
Sbjct: 366 LATLV----NLQQLGFSSNQIKEIPDSLATLVNLQQLDISSNQI 405



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 76/239 (31%), Positives = 124/239 (51%), Gaps = 17/239 (7%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNL-LTA----ESLPK 120
           NNL   P   +KF  L+ L+LS N+I  +P++     LS LI    L L+A    + +P 
Sbjct: 79  NNLEAIPVIITKFPKLKQLNLSFNQIKEIPES-----LSALINLQQLDLSANHQIKEIPD 133

Query: 121 DMSNLKNLKVFNLSGN-QLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
            +S L NL+  +LS N Q+++ P  +  +  L+ L LG N +  +P  +  L  L  L L
Sbjct: 134 SLSALINLQQLDLSANHQIKEIPDSLAALVNLQQLQLGGNPIKEIPYVLTTLVSLQQLHL 193

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
               + +IPD+   L  L+ L L +NQ++ +P S++ L  L+ L L+ N+++ +P  +  
Sbjct: 194 NDTGIKEIPDSLAALVNLQQLYLYNNQIKEIPDSLAALSNLQRLQLNFNRIKKIPDSLAK 253

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLEL 298
           L  L +    L L+ N++  +P    TLK L +L L  N   I+ + D   K  SL +L
Sbjct: 254 LASLQQ----LDLNINQISEIPDSFATLKNLQKLDLGSNQ--IKKIPDSFGKLASLQQL 306



 Score = 90.5 bits (223), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 67/237 (28%), Positives = 117/237 (49%), Gaps = 22/237 (9%)

Query: 66  NNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDMSN 124
           N +S  PD+ +   NL+ LDL +N+I  +P +      L  L   +N +  + +P     
Sbjct: 265 NQISEIPDSFATLKNLQKLDLGSNQIKKIPDSFGKLASLQQLNLGSNQI--KKIPDSFGK 322

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L +L+  NLS N++E+ P     +  L+ LYL NN +  VP  +  L  L  L    N +
Sbjct: 323 LASLQQLNLSHNKIEEIPDSFATLVNLQQLYLYNNPIKEVPDSLATLVNLQQLGFSSNQI 382

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS 244
            +IPD+   L  L+ L +S NQ++ +P S++ L  L++L L + ++  +P  + TL  L 
Sbjct: 383 KEIPDSLATLVNLQQLDISSNQIKEIPDSLAALTHLQNLGLSSTQITEIPDFLSTLVNLQ 442

Query: 245 E-------------------KLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           +                    L++L L +N++  +P+ +  L  L +L LR NP+ +
Sbjct: 443 QLNLSFNQIKKIPDSFVKLASLQALYLCSNQITKIPSFLENLPALQKLDLRLNPIPV 499



 Score = 86.3 bits (212), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 129/252 (51%), Gaps = 17/252 (6%)

Query: 63  LYHNNLSFFPDNASKFTNLRSLDLS-NNRITHLPQAITNFPLSTLIARNNL-LTA----E 116
           L  N +   P++ S   NL+ LDLS N++I  +P +     LS LI    L L+A    +
Sbjct: 99  LSFNQIKEIPESLSALINLQQLDLSANHQIKEIPDS-----LSALINLQQLDLSANHQIK 153

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            +P  ++ L NL+   L GN +++ P  +  + +L+ L+L +  +  +P  +  L  L  
Sbjct: 154 EIPDSLAALVNLQQLQLGGNPIKEIPYVLTTLVSLQQLHLNDTGIKEIPDSLAALVNLQQ 213

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N + +IPD+   L  L+ L L+ N+++ +P S++ L  L+ L L+ N++  +P  
Sbjct: 214 LYLYNNQIKEIPDSLAALSNLQRLQLNFNRIKKIPDSLAKLASLQQLDLNINQISEIPDS 273

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLL 296
             TLK     L+ L L +N+++ +P     L  L +L+L  N   I+ + D   K  SL 
Sbjct: 274 FATLK----NLQKLDLGSNQIKKIPDSFGKLASLQQLNLGSNQ--IKKIPDSFGKLASLQ 327

Query: 297 ELASRTLKVHEI 308
           +L     K+ EI
Sbjct: 328 QLNLSHNKIEEI 339



 Score = 62.4 bits (150), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 101/196 (51%), Gaps = 18/196 (9%)

Query: 17  DSF-KTVSIKTLDFSYSSLDS--ETLATQIEL----LPNNDYNKKPENIDTLL------L 63
           DSF K  S++ L+ S++ ++   ++ AT + L    L NN   + P+++ TL+       
Sbjct: 318 DSFGKLASLQQLNLSHNKIEEIPDSFATLVNLQQLYLYNNPIKEVPDSLATLVNLQQLGF 377

Query: 64  YHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLPKDM 122
             N +   PD+ +   NL+ LD+S+N+I  +P ++     L  L   +  +T   +P  +
Sbjct: 378 SSNQIKEIPDSLATLVNLQQLDISSNQIKEIPDSLAALTHLQNLGLSSTQIT--EIPDFL 435

Query: 123 SNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGN 182
           S L NL+  NLS NQ+++ P   + + +L+ LYL +N +  +P  +  L  L  L L  N
Sbjct: 436 STLVNLQQLNLSFNQIKKIPDSFVKLASLQALYLCSNQITKIPSFLENLPALQKLDLRLN 495

Query: 183 SLTDIPDTFG--DLYQ 196
            +   P+  G  +LY+
Sbjct: 496 PIPVSPEILGSEELYE 511



 Score = 54.3 bits (129), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 83/171 (48%), Gaps = 13/171 (7%)

Query: 116 ESLPKDMSNLKNLKVFNLSG-------NQLEQFPIQILDIPTLKYLYLGNNSLNHVPREI 168
           ++LP  +  L  L+   L         N L+  P +   +  LK L    N+L  +P  I
Sbjct: 29  DALPPAIGKLAKLETLILGKWNGEAQENNLKTLPPETTQLQKLKRLEWPCNNLEAIPVII 88

Query: 169 NKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDN-QLESLPASISNLKMLKSL-LLH 226
            K  KL  L+L  N + +IP++   L  L+ L LS N Q++ +P S+S L  L+ L L  
Sbjct: 89  TKFPKLKQLNLSFNQIKEIPESLSALINLQQLDLSANHQIKEIPDSLSALINLQQLDLSA 148

Query: 227 NNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRD 277
           N++++ +P  +  L      L+ L L  N ++ +P  + TL  L +L L D
Sbjct: 149 NHQIKEIPDSLAALV----NLQQLQLGGNPIKEIPYVLTTLVSLQQLHLND 195


>gi|426384526|ref|XP_004058813.1| PREDICTED: protein LAP2 isoform 2 [Gorilla gorilla gorilla]
          Length = 1419

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 132/288 (45%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|157128242|ref|XP_001661361.1| LAP4 protein (Scribble protein) (Smell-impaired protein) [Aedes
           aegypti]
 gi|108882248|gb|EAT46473.1| AAEL002336-PA, partial [Aedes aegypti]
          Length = 626

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/208 (35%), Positives = 113/208 (54%), Gaps = 7/208 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           +++L L  N L   P++ S+ TNL  LDL +N I  LP  +   P L  L   +N L  +
Sbjct: 101 LESLELRENLLKHLPESISQLTNLERLDLGDNEIEELPPHLGYLPALQELWLDHNQL--Q 158

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            LP ++  LKNL   ++S N++E+ P +I  +  L  L+L  N L  +P  I+KL KL +
Sbjct: 159 KLPPEIGLLKNLVCLDVSENRMEELPEEIGGLENLTDLHLSQNLLEVLPDGISKLTKLTI 218

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L L  N L  + +  G    ++ LIL++N L  LP +I N+ ML +L +  N L ++P+E
Sbjct: 219 LKLDQNRLHTLNENIGQCVNMQELILTENFLNELPYTIGNMTMLNNLNVDRNSLISVPSE 278

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           +   K     L  L L  NKL  LP+E+
Sbjct: 279 LGNCK----NLGVLSLRENKLTKLPSEL 302



 Score = 96.3 bits (238), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 110/211 (52%), Gaps = 9/211 (4%)

Query: 74  NASKFTNLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVF 131
           N  +   LR L LS+N I  LP  I NF   +   ++RN++     +P D+ +L++L++ 
Sbjct: 2   NFFRLHRLRKLGLSDNEIIKLPSDIQNFENLVELDVSRNDI---GDIPDDIKHLRSLQIL 58

Query: 132 NLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTF 191
           + S N + + P     +  L  L L + SL  +P++   L KL  L L  N L  +P++ 
Sbjct: 59  DFSSNPIHRLPAGFSQLRNLTILGLNDMSLTSLPQDFGCLSKLESLELRENLLKHLPESI 118

Query: 192 GDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLL 251
             L  LE L L DN++E LP  +  L  L+ L L +N+L+ LP EI  LK     L  L 
Sbjct: 119 SQLTNLERLDLGDNEIEELPPHLGYLPALQELWLDHNQLQKLPPEIGLLK----NLVCLD 174

Query: 252 LHNNKLRTLPTEIITLKCLSELSLRDNPLVI 282
           +  N++  LP EI  L+ L++L L  N L +
Sbjct: 175 VSENRMEELPEEIGGLENLTDLHLSQNLLEV 205



 Score = 92.4 bits (228), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 98/311 (31%), Positives = 143/311 (45%), Gaps = 60/311 (19%)

Query: 56  ENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQA----------------IT 99
           EN+  L +  N++   PD+     +L+ LD S+N I  LP                  +T
Sbjct: 30  ENLVELDVSRNDIGDIPDDIKHLRSLQILDFSSNPIHRLPAGFSQLRNLTILGLNDMSLT 89

Query: 100 NFP--------LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTL 151
           + P        L +L  R NLL  + LP+ +S L NL+  +L  N++E+ P  +  +P L
Sbjct: 90  SLPQDFGCLSKLESLELRENLL--KHLPESISQLTNLERLDLGDNEIEELPPHLGYLPAL 147

Query: 152 KYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
           + L+L +N L  +P EI  L  L  L +  N + ++P+  G L  L  L LS N LE LP
Sbjct: 148 QELWLDHNQLQKLPPEIGLLKNLVCLDVSENRMEELPEEIGGLENLTDLHLSQNLLEVLP 207

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTE----------IITLKCLSE---------KLKSLLL 252
             IS L  L  L L  N+L TL             I+T   L+E          L +L +
Sbjct: 208 DGISKLTKLTILKLDQNRLHTLNENIGQCVNMQELILTENFLNELPYTIGNMTMLNNLNV 267

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDYSQ 312
             N L ++P+E+   K L  LSLR+N L          K PS L      L++H +D S 
Sbjct: 268 DRNSLISVPSELGNCKNLGVLSLRENKLT---------KLPSEL---GNCLELHVLDVSG 315

Query: 313 ---EHLPQNLV 320
              +HLP +LV
Sbjct: 316 NRLQHLPYSLV 326



 Score = 85.9 bits (211), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 77/221 (34%), Positives = 101/221 (45%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTAESLP 119
           L L  N +   P +   F NL  LD+S N I  +P  I +   L  L   +N +    LP
Sbjct: 12  LGLSDNEIIKLPSDIQNFENLVELDVSRNDIGDIPDDIKHLRSLQILDFSSNPI--HRLP 69

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
              S L+NL +  L+   L   P     +  L+ L L  N L H+P  I++L  L  L L
Sbjct: 70  AGFSQLRNLTILGLNDMSLTSLPQDFGCLSKLESLELRENLLKHLPESISQLTNLERLDL 129

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
           G N + ++P   G L  L+ L L  NQL+ LP  I  LK L  L +  N++  LP EI  
Sbjct: 130 GDNEIEELPPHLGYLPALQELWLDHNQLQKLPPEIGLLKNLVCLDVSENRMEELPEEIGG 189

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
           L    E L  L L  N L  LP  I  L  L+ L L  N L
Sbjct: 190 L----ENLTDLHLSQNLLEVLPDGISKLTKLTILKLDQNRL 226



 Score = 79.0 bits (193), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 97/206 (47%), Gaps = 8/206 (3%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAE 116
           +  L L HN L   P       NL  LD+S NR+  LP+ I     L+ L    NLL  E
Sbjct: 147 LQELWLDHNQLQKLPPEIGLLKNLVCLDVSENRMEELPEEIGGLENLTDLHLSQNLL--E 204

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            LP  +S L  L +  L  N+L      I     ++ L L  N LN +P  I  +  L+ 
Sbjct: 205 VLPDGISKLTKLTILKLDQNRLHTLNENIGQCVNMQELILTENFLNELPYTIGNMTMLNN 264

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
           L++  NSL  +P   G+   L  L L +N+L  LP+ + N   L  L +  N+L+ LP  
Sbjct: 265 LNVDRNSLISVPSELGNCKNLGVLSLRENKLTKLPSELGNCLELHVLDVSGNRLQHLPYS 324

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPT 262
           ++ L     +LK++ L  N+ + L T
Sbjct: 325 LVNL-----QLKAVWLSENQAQPLLT 345


>gi|8923909|ref|NP_061165.1| protein LAP2 isoform 2 [Homo sapiens]
 gi|8572221|gb|AAF77048.1|AF263744_1 erbb2-interacting protein ERBIN [Homo sapiens]
 gi|20521800|dbj|BAA86539.2| KIAA1225 protein [Homo sapiens]
 gi|119571719|gb|EAW51334.1| erbb2 interacting protein, isoform CRA_c [Homo sapiens]
 gi|168269750|dbj|BAG10002.1| erbb2 interacting protein [synthetic construct]
          Length = 1371

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 134/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI-ARNNLLTA----------- 115
           L+  P + +   NLR LD+S N I   P+ I N  + T++ A  N ++            
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 116 ----------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                     E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|387016772|gb|AFJ50505.1| Leucine-rich repeat-containing protein 1-like [Crotalus adamanteus]
          Length = 524

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/242 (32%), Positives = 121/242 (50%), Gaps = 11/242 (4%)

Query: 46  LPNNDYNKKPENIDTLL------LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           L +N+  + P  I   +      L  N++   P++ S   +L+  D S N +T LP++  
Sbjct: 66  LSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKSLQVADFSGNPLTRLPESFP 125

Query: 100 NFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNN 159
                T ++ N++ + ++LP+++ NL NL    L  N L   P  +  +  L+ L LGNN
Sbjct: 126 ELQNLTCLSANDI-SLQALPENIGNLYNLASLELRENLLTYLPESVAHLQRLEELDLGNN 184

Query: 160 SLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKM 219
            L ++P  I  L  L  L L GN L +IP   G L  L  L +S+N+LE LP  I+ L  
Sbjct: 185 ELYNLPGTIGALYNLKDLWLDGNQLAEIPQEIGSLKNLLCLDISENKLEKLPEEINGLTA 244

Query: 220 LKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNP 279
           L  LL+  N L  LP  +  LK    KL  L +  N+L  L   +   +CL+EL L +N 
Sbjct: 245 LTDLLISQNLLEMLPDGVGKLK----KLSILKVDQNRLTQLTEAVGNCECLTELVLTENQ 300

Query: 280 LV 281
           L+
Sbjct: 301 LL 302



 Score = 98.2 bits (243), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 73/209 (34%), Positives = 112/209 (53%), Gaps = 7/209 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITN-FPLSTLIARNNLLTA 115
           N+ +L L  N L++ P++ +    L  LDL NN + +LP  I   + L  L    N L  
Sbjct: 152 NLASLELRENLLTYLPESVAHLQRLEELDLGNNELYNLPGTIGALYNLKDLWLDGNQLA- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+++ +LKNL   ++S N+LE+ P +I  +  L  L +  N L  +P  + KL KL 
Sbjct: 211 -EIPQEIGSLKNLLCLDISENKLEKLPEEINGLTALTDLLISQNLLEMLPDGVGKLKKLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L +  N LT + +  G+   L  L+L++NQL +LP SI  LK L  L +  NKL +LP 
Sbjct: 270 ILKVDQNRLTQLTEAVGNCECLTELVLTENQLLTLPKSIGKLKKLNILNVDRNKLVSLPK 329

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           EI    C S  L    + +N+L  +P EI
Sbjct: 330 EIGG--CCS--LNVFSVRDNQLSRIPPEI 354



 Score = 96.3 bits (238), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 81/223 (36%), Positives = 115/223 (51%), Gaps = 9/223 (4%)

Query: 58  IDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLTA 115
           ++ LLL  N L   P    +   LR L LS+N I  LP  I NF  L  L ++RN++   
Sbjct: 38  LEELLLDANQLRELPKPFFQLIKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDI--- 94

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             +P+ +S  K+L+V + SGN L + P    ++  L  L   + SL  +P  I  L  L 
Sbjct: 95  PEIPESISFCKSLQVADFSGNPLTRLPESFPELQNLTCLSANDISLQALPENIGNLYNLA 154

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
            L L  N LT +P++   L +LE L L +N+L +LP +I  L  LK L L  N+L  +P 
Sbjct: 155 SLELRENLLTYLPESVAHLQRLEELDLGNNELYNLPGTIGALYNLKDLWLDGNQLAEIPQ 214

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           EI +LK     L  L +  NKL  LP EI  L  L++L +  N
Sbjct: 215 EIGSLK----NLLCLDISENKLEKLPEEINGLTALTDLLISQN 253



 Score = 86.7 bits (213), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 68/207 (32%), Positives = 100/207 (48%), Gaps = 8/207 (3%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+  L L  N L+  P       NL  LD+S N++  LP+ I     L+ L+   NLL  
Sbjct: 198 NLKDLWLDGNQLAEIPQEIGSLKNLLCLDISENKLEKLPEEINGLTALTDLLISQNLL-- 255

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
           E LP  +  LK L +  +  N+L Q    + +   L  L L  N L  +P+ I KL KL+
Sbjct: 256 EMLPDGVGKLKKLSILKVDQNRLTQLTEAVGNCECLTELVLTENQLLTLPKSIGKLKKLN 315

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L++  N L  +P   G    L    + DNQL  +P  IS+   L  L +  N+L  LP 
Sbjct: 316 ILNVDRNKLVSLPKEIGGCCSLNVFSVRDNQLSRIPPEISHATELHVLDVAGNRLIHLPM 375

Query: 236 EIITLKCLSEKLKSLLLHNNKLRTLPT 262
            + +L     KLK+L L +N+ + L T
Sbjct: 376 SLTSL-----KLKALWLSDNQSQPLLT 397



 Score = 74.3 bits (181), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/165 (35%), Positives = 82/165 (49%), Gaps = 4/165 (2%)

Query: 117 SLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHV 176
            LPK    L  L+   LS N++++ P +I +   L  L L  N +  +P  I+    L V
Sbjct: 50  ELPKPFFQLIKLRKLGLSDNEIQRLPPEIANFMQLVELDLSRNDIPEIPESISFCKSLQV 109

Query: 177 LSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTE 236
               GN LT +P++F +L  L  L  +D  L++LP +I NL  L SL L  N L  LP  
Sbjct: 110 ADFSGNPLTRLPESFPELQNLTCLSANDISLQALPENIGNLYNLASLELRENLLTYLPES 169

Query: 237 IITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
           +  L    ++L+ L L NN+L  LP  I  L  L +L L  N L 
Sbjct: 170 VAHL----QRLEELDLGNNELYNLPGTIGALYNLKDLWLDGNQLA 210


>gi|410948707|ref|XP_003981072.1| PREDICTED: LOW QUALITY PROTEIN: protein LAP2 [Felis catus]
          Length = 1421

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/221 (32%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDGNRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLLSSNSLQQLPETIGSLKNVTTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+S+  L  +++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLASIEELDCSFNEVEALPSSVGQLTNIRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 97.1 bits (240), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/288 (30%), Positives = 135/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI-ARNNLLTA----------- 115
           L+  P + +   NLR LD+S N I   P+ I N  + T++ A  N ++            
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTVVEASVNPISKLPDGFSQLLNL 140

Query: 116 ----------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                     E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 XQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    + GN LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDGNRLTFIPGFIGSLKQLTYLDVSKNNIEMIEEGISACENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNVT----TLKIDENQLMYLPDSIGGLASIEEL 304


>gi|358679316|ref|NP_001240627.1| protein LAP2 isoform 4 [Homo sapiens]
          Length = 1346

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 132/288 (45%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLD---------SETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|260826171|ref|XP_002608039.1| hypothetical protein BRAFLDRAFT_74989 [Branchiostoma floridae]
 gi|229293389|gb|EEN64049.1| hypothetical protein BRAFLDRAFT_74989 [Branchiostoma floridae]
          Length = 975

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/256 (28%), Positives = 125/256 (48%), Gaps = 24/256 (9%)

Query: 45  LLPNNDYNKKPENIDTLL---LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF 101
            L     N +P+ ++  L   L +  L+  P+     T L  LD+SNN +T +P+AI   
Sbjct: 342 FLKQQGENLQPQTVNGHLKIDLSNQGLTSIPEEVFDITGLEVLDVSNNELTSIPEAIGRL 401

Query: 102 -PLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNS 160
             L+ + A  N+LT  SLP+ + +L  L    +  N+L + P  I  +  L+ L +GNN 
Sbjct: 402 QKLNRMDAGGNMLT--SLPQAIGSLSKLTHLYIYDNRLTELPPWICSLCNLEVLVVGNNR 459

Query: 161 LNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKML 220
           L+ +P +I KL KL  L +  N L ++P     L  LE L+  +N+L  LP  +  L+ L
Sbjct: 460 LSTLPPDIEKLRKLTNLHIHDNQLKEVPQAICSLLNLEVLVTGNNRLSKLPPGVGRLQNL 519

Query: 221 KSLLLHNNKLRTLPTEIITL------------------KCLSEKLKSLLLHNNKLRTLPT 262
           + L +++N+++ LP  + +L                     +  L+ + L+NNK  T P 
Sbjct: 520 RELFINDNQVKMLPLGVFSLFNFEVLDVSNNKVSTLPPGAKNANLREVYLYNNKFDTFPE 579

Query: 263 EIITLKCLSELSLRDN 278
            +  L  + +L +R N
Sbjct: 580 VLCELPAMEKLDIRFN 595



 Score = 99.0 bits (245), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 79/252 (31%), Positives = 126/252 (50%), Gaps = 26/252 (10%)

Query: 52  NKKPENIDTLL---LYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLI 107
           N +P+ ++ LL   L +  L+  P+     T+L  LD+SNN++T++P+AI     L TL 
Sbjct: 5   NLQPQIVNGLLKLDLSNQGLTSIPEEVFDITDLEVLDVSNNKLTNIPEAIGRLQKLDTLS 64

Query: 108 ARNNLLTA---------------------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQIL 146
           A +N+LT+                       LP  + +L+NL+  N+  N+L + P ++ 
Sbjct: 65  AYSNMLTSLPHAIRSLQELKLLVVYNNDLSMLPDGLESLENLEYLNVKNNKLTKLPSKVF 124

Query: 147 DIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQ 206
             P L  L +GNN L+  P  + KL KL  L L  N LT++P     L  LE L ++ N 
Sbjct: 125 SCPNLVVLNVGNNKLSTFPAGVEKLQKLTKLYLHSNELTEVPSGVYSLSNLEVLCVARNP 184

Query: 207 LESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIIT 266
           +  L   I+ L  LKSL++ +      P +++ LK L E L +     +K   +P E+  
Sbjct: 185 IRRLSDDITRLTRLKSLIVADCHFDEFPRQVLHLKTL-EVLYAGQAGGSKFDMVPDELED 243

Query: 267 LKCLSELSLRDN 278
           L+ L  LSL +N
Sbjct: 244 LQHLWYLSLENN 255



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 119/244 (48%), Gaps = 26/244 (10%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+  + L++N    FP+   +   ++ LD+ NN IT LP A+     L  L    N LT 
Sbjct: 269 NLRVVNLWNNQFDTFPEVLCELPAMKELDIKNNSITRLPIALHRADKLEDLNVFGNPLTY 328

Query: 116 ESLPKDMSNLKNLKVF-------------------NLSGNQLEQFPIQILDIPTLKYLYL 156
              P+ +   + +  F                   +LS   L   P ++ DI  L+ L +
Sbjct: 329 P--PRHVQGTRAIMTFLKQQGENLQPQTVNGHLKIDLSNQGLTSIPEEVFDITGLEVLDV 386

Query: 157 GNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISN 216
            NN L  +P  I +L KL+ +  GGN LT +P   G L +L  L + DN+L  LP  I +
Sbjct: 387 SNNELTSIPEAIGRLQKLNRMDAGGNMLTSLPQAIGSLSKLTHLYIYDNRLTELPPWICS 446

Query: 217 LKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLR 276
           L  L+ L++ NN+L TLP +I  L+    KL +L +H+N+L+ +P  I +L  L  L   
Sbjct: 447 LCNLEVLVVGNNRLSTLPPDIEKLR----KLTNLHIHDNQLKEVPQAICSLLNLEVLVTG 502

Query: 277 DNPL 280
           +N L
Sbjct: 503 NNRL 506



 Score = 78.2 bits (191), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 105/221 (47%), Gaps = 16/221 (7%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTL----IARNNL 112
           N+  L + +N LS FP    K   L  L L +N +T +P  +  + LS L    +ARN +
Sbjct: 128 NLVVLNVGNNKLSTFPAGVEKLQKLTKLYLHSNELTEVPSGV--YSLSNLEVLCVARNPI 185

Query: 113 LTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLG---NNSLNHVPREIN 169
                L  D++ L  LK   ++    ++FP Q+L + TL+ LY G    +  + VP E+ 
Sbjct: 186 ---RRLSDDITRLTRLKSLIVADCHFDEFPRQVLHLKTLEVLYAGQAGGSKFDMVPDELE 242

Query: 170 KLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNK 229
            L  L  LSL  N L  +P T   L+ L  + L +NQ ++ P  +  L  +K L + NN 
Sbjct: 243 DLQHLWYLSLENNLLRTLPSTMSHLHNLRVVNLWNNQFDTFPEVLCELPAMKELDIKNNS 302

Query: 230 LRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCL 270
           +  LP  +      ++KL+ L +  N L   P  +   + +
Sbjct: 303 ITRLPIALHR----ADKLEDLNVFGNPLTYPPRHVQGTRAI 339



 Score = 54.7 bits (130), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 46/181 (25%), Positives = 86/181 (47%), Gaps = 25/181 (13%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N++ L++ +N LS  P +  K   L +L + +N++  +PQAI +   L  L+  NN L+ 
Sbjct: 449 NLEVLVVGNNRLSTLPPDIEKLRKLTNLHIHDNQLKEVPQAICSLLNLEVLVTGNNRLS- 507

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPI--------QILDI--------------PTLKY 153
             LP  +  L+NL+   ++ NQ++  P+        ++LD+                L+ 
Sbjct: 508 -KLPPGVGRLQNLRELFINDNQVKMLPLGVFSLFNFEVLDVSNNKVSTLPPGAKNANLRE 566

Query: 154 LYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPAS 213
           +YL NN  +  P  + +L  +  L +  N+++ +P       +LE L +S N L   P  
Sbjct: 567 VYLYNNKFDTFPEVLCELPAMEKLDIRFNNISRLPTALHRADKLEDLDVSGNPLTYPPQD 626

Query: 214 I 214
           +
Sbjct: 627 V 627



 Score = 48.1 bits (113), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 56/260 (21%), Positives = 111/260 (42%), Gaps = 30/260 (11%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTA 115
           N++ L +  N +    D+ ++ T L+SL +++      P+ + +   L  L A     + 
Sbjct: 174 NLEVLCVARNPIRRLSDDITRLTRLKSLIVADCHFDEFPRQVLHLKTLEVLYAGQAGGSK 233

Query: 116 -ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
            + +P ++ +L++L   +L  N L   P  +  +  L+ + L NN  +  P  + +L  +
Sbjct: 234 FDMVPDELEDLQHLWYLSLENNLLRTLPSTMSHLHNLRVVNLWNNQFDTFPEVLCELPAM 293

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLL---------- 224
             L +  NS+T +P       +LE L +  N L   P  +   + + + L          
Sbjct: 294 KELDIKNNSITRLPIALHRADKLEDLNVFGNPLTYPPRHVQGTRAIMTFLKQQGENLQPQ 353

Query: 225 ---------LHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSL 275
                    L N  L ++P E+  +      L+ L + NN+L ++P  I  L+ L+ +  
Sbjct: 354 TVNGHLKIDLSNQGLTSIPEEVFDITG----LEVLDVSNNELTSIPEAIGRLQKLNRMDA 409

Query: 276 RDN-----PLVIRFVSDMTY 290
             N     P  I  +S +T+
Sbjct: 410 GGNMLTSLPQAIGSLSKLTH 429


>gi|397514429|ref|XP_003827490.1| PREDICTED: protein LAP2 isoform 3 [Pan paniscus]
 gi|410039319|ref|XP_003950596.1| PREDICTED: protein LAP2 [Pan troglodytes]
          Length = 1419

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/288 (30%), Positives = 132/288 (45%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLD---------SETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARN----------------- 110
           L+  P + +   NLR LD+S N I   P+ I N  + T++  +                 
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 111 -----NLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                N    E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|358679311|ref|NP_001240626.1| protein LAP2 isoform 1 [Homo sapiens]
 gi|116242614|sp|Q96RT1.2|LAP2_HUMAN RecName: Full=Protein LAP2; AltName: Full=Densin-180-like protein;
           AltName: Full=Erbb2-interacting protein; Short=Erbin
 gi|119571720|gb|EAW51335.1| erbb2 interacting protein, isoform CRA_d [Homo sapiens]
          Length = 1412

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 134/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI-ARNNLLTA----------- 115
           L+  P + +   NLR LD+S N I   P+ I N  + T++ A  N ++            
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 116 ----------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                     E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|92098125|gb|AAI15013.1| Erbb2 interacting protein [Homo sapiens]
          Length = 1371

 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPEPIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 134/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI-ARNNLLTA----------- 115
           L+  P + +   NLR LD+S N I   P+ I N  + T++ A  N ++            
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 116 ----------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                     E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPEPIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|410354913|gb|JAA44060.1| erbb2 interacting protein [Pan troglodytes]
          Length = 1367

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 134/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI-ARNNLLTA----------- 115
           L+  P + +   NLR LD+S N I   P+ I N  + T++ A  N ++            
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 116 ----------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                     E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|332821306|ref|XP_003310748.1| PREDICTED: protein LAP2 [Pan troglodytes]
 gi|397514433|ref|XP_003827492.1| PREDICTED: protein LAP2 isoform 5 [Pan paniscus]
          Length = 1346

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 134/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI-ARNNLLTA----------- 115
           L+  P + +   NLR LD+S N I   P+ I N  + T++ A  N ++            
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 116 ----------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                     E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|26341692|dbj|BAC34508.1| unnamed protein product [Mus musculus]
 gi|148694404|gb|EDL26351.1| leucine rich repeat containing 1, isoform CRA_c [Mus musculus]
          Length = 349

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 72/181 (39%), Positives = 105/181 (58%), Gaps = 3/181 (1%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTLIARNNLLTA 115
           N+ +L L  N L++ PD+ ++   L  LDL NN I +LP++I     L  L    N L+ 
Sbjct: 152 NLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLS- 210

Query: 116 ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLH 175
             LP+++ NLKNL   ++S N+LE+ P +I  + +L YL +  N L  +P  I KL KL 
Sbjct: 211 -ELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLS 269

Query: 176 VLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPT 235
           +L L  N LT +P+  GD   L  L+L++N+L +LP SI  LK L +L    NKL +LP 
Sbjct: 270 ILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLVSLPK 329

Query: 236 E 236
           E
Sbjct: 330 E 330



 Score = 98.6 bits (244), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 81/224 (36%), Positives = 115/224 (51%), Gaps = 9/224 (4%)

Query: 57  NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNF-PLSTL-IARNNLLT 114
           +++ LLL  N L   P+   +   LR L LS+N I  LP  I NF  L  L ++RN++  
Sbjct: 37  SLEELLLDANQLRELPEQFFQLVKLRKLGLSDNEIQRLPPEIANFMQLVELDVSRNDI-- 94

Query: 115 AESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKL 174
              +P+ ++  K L+V + SGN L + P    ++  L  L + + SL  +P  I  L  L
Sbjct: 95  -PEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDISLQSLPENIGNLYNL 153

Query: 175 HVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP 234
             L L  N LT +PD+   L +LE L L +N++ +LP SI  L  LK L L  N+L  LP
Sbjct: 154 ASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQLSELP 213

Query: 235 TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
            EI  LK     L  L +  N+L  LP EI  L  L+ L +  N
Sbjct: 214 QEIGNLK----NLLCLDVSENRLERLPEEISGLTSLTYLVISQN 253



 Score = 92.8 bits (229), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 76/236 (32%), Positives = 115/236 (48%), Gaps = 20/236 (8%)

Query: 65  HNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSN 124
            N++   P++ +    L+  D S N +T LP++       T ++ N++ + +SLP+++ N
Sbjct: 91  RNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNLTCLSVNDI-SLQSLPENIGN 149

Query: 125 LKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSL 184
           L NL    L  N L   P  +  +  L+ L LGNN + ++P  I  L  L  L L GN L
Sbjct: 150 LYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLPESIGALLHLKDLWLDGNQL 209

Query: 185 TDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLP---------- 234
           +++P   G+L  L  L +S+N+LE LP  IS L  L  L++  N L T+P          
Sbjct: 210 SELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTYLVISQNLLETIPEGIGKLKKLS 269

Query: 235 ---------TEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPLV 281
                    T++       E L  L+L  N+L TLP  I  LK LS L+   N LV
Sbjct: 270 ILKLDQNRLTQLPEAIGDCENLTELVLTENRLLTLPKSIGKLKKLSNLNADRNKLV 325



 Score = 75.1 bits (183), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 72/237 (30%), Positives = 108/237 (45%), Gaps = 28/237 (11%)

Query: 80  NLRSLDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQ 137
           ++ ++D  +  + ++P+ I  +   L  L+   N L    LP+    L  L+   LS N+
Sbjct: 13  HVEAIDKRHCSLVYVPEEIYRYARSLEELLLDANQL--RELPEQFFQLVKLRKLGLSDNE 70

Query: 138 LEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQL 197
           +++ P +I +   L  L +  N +  +P  I     L V    GN LT +P++F +L  L
Sbjct: 71  IQRLPPEIANFMQLVELDVSRNDIPEIPESIAFCKALQVADFSGNPLTRLPESFPELQNL 130

Query: 198 EALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSE------------ 245
             L ++D  L+SLP +I NL  L SL L  N L  LP  +  L+ L E            
Sbjct: 131 TCLSVNDISLQSLPENIGNLYNLASLELRENLLTYLPDSLTQLRRLEELDLGNNEIYNLP 190

Query: 246 -------KLKSLLLHNNKLRTLPTEIITLK---CL--SELSLRDNPLVIRFVSDMTY 290
                   LK L L  N+L  LP EI  LK   CL  SE  L   P  I  ++ +TY
Sbjct: 191 ESIGALLHLKDLWLDGNQLSELPQEIGNLKNLLCLDVSENRLERLPEEISGLTSLTY 247


>gi|14582259|gb|AAK69431.1| densin-180-like protein [Homo sapiens]
          Length = 1412

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 74/221 (33%), Positives = 111/221 (50%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N L   P   ++ T L  LDL +N  T +P+ +     L       N LT   +P
Sbjct: 166 LELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVPEVLEQLSGLKEFWMDANRLTF--IP 223

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             + +LK L   ++S N +E     I     L+ L L +NSL  +P  I  L  +  L +
Sbjct: 224 GFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLLSSNSLQQLPETIGSLKNITTLKI 283

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N L  +PD+ G L  +E L  S N++E+LP+SI  L  L++    +N L+ LP EI +
Sbjct: 284 DENQLMYLPDSIGGLISVEELDCSFNEVEALPSSIGQLTNLRTFAADHNYLQQLPPEIGS 343

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     L LH+NKL TLP E+  ++ L  ++L DN L
Sbjct: 344 WKNIT----VLFLHSNKLETLPEEMGDMQKLKVINLSDNRL 380



 Score = 93.6 bits (231), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 88/288 (30%), Positives = 134/288 (46%), Gaps = 43/288 (14%)

Query: 23  SIKTLDFSYSSLDS---------ETL------ATQIELLPNNDYNKKPENIDTLLLYHNN 67
           ++ TLD+S+ SL+          +TL      A QIE LP   +N   +++  L L  N+
Sbjct: 23  TVTTLDYSHCSLEQVPKEIFTFEKTLEELYLDANQIEELPKQLFNC--QSLHKLSLPDND 80

Query: 68  LSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFPLSTLI-ARNNLLTA----------- 115
           L+  P + +   NLR LD+S N I   P+ I N  + T++ A  N ++            
Sbjct: 81  LTTLPASIANLINLRELDVSKNGIQEFPENIKNCKVLTIVEASVNPISKLPDGFSQLLNL 140

Query: 116 ----------ESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVP 165
                     E LP +   L  L++  L  NQL+  P  +  +  L+ L LG+N    VP
Sbjct: 141 TQLYLNDAFLEFLPANFGRLTKLQILELRENQLKMLPKTMNRLTQLERLDLGSNEFTEVP 200

Query: 166 REINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLL 225
             + +L  L    +  N LT IP   G L QL  L +S N +E +   IS  + L+ LLL
Sbjct: 201 EVLEQLSGLKEFWMDANRLTFIPGFIGSLKQLTYLDVSKNNIEMVEEGISTCENLQDLLL 260

Query: 226 HNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSEL 273
            +N L+ LP  I +LK ++    +L +  N+L  LP  I  L  + EL
Sbjct: 261 SSNSLQQLPETIGSLKNIT----TLKIDENQLMYLPDSIGGLISVEEL 304


>gi|334321689|ref|XP_001379482.2| PREDICTED: leucine-rich repeat-containing protein 7 [Monodelphis
           domestica]
          Length = 1571

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 80/221 (36%), Positives = 113/221 (51%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N+L   P +  K   L  LDL NN  + LP+ +     L  L   NN L  ++LP
Sbjct: 196 LELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLEQIQNLRELWMDNNAL--QTLP 253

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             +  LK L   ++S N++E   + I     L+ L L +N L  +P  I  L KL  L +
Sbjct: 254 GSIGKLKMLVYLDMSKNRIETVDLDISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKV 313

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N LT +P+  G+L  LE    S N+LESLPA+I  L  L++L +  N L  LP EI +
Sbjct: 314 DDNQLTVLPNAIGNLSLLEEFDCSCNELESLPATIGYLHSLRTLAVDENFLPELPREIGS 373

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     + L +NKL  LP EI  ++ L  L+L DN L
Sbjct: 374 CKNVT----VMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRL 410



 Score = 98.2 bits (243), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 81/244 (33%), Positives = 123/244 (50%), Gaps = 9/244 (3%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A QIE LP   +N   + +  L +  N+LS  P   +   NL+ LD+S N +   P+ I 
Sbjct: 85  ANQIEELPKQLFNC--QALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIK 142

Query: 100 NFPLSTLI-ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
                T+I A  N ++   LP   + L NL    L+   LE  P     +  L+ L L  
Sbjct: 143 CCKCLTIIEASVNPIS--KLPDGFTQLINLTQLYLNDAFLEFLPANFGRLVKLRILELRE 200

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P+ ++KL +L  L LG N  +++P+    +  L  L + +N L++LP SI  LK
Sbjct: 201 NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLEQIQNLRELWMDNNALQTLPGSIGKLK 260

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           ML  L +  N++ T+  +I    C  E L+ LLL +N L+ LP  I  LK L+ L + DN
Sbjct: 261 MLVYLDMSKNRIETVDLDISG--C--EALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDN 316

Query: 279 PLVI 282
            L +
Sbjct: 317 QLTV 320



 Score = 82.8 bits (203), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 106/218 (48%), Gaps = 32/218 (14%)

Query: 46  LPNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRI-------- 91
           L NN++++ PE      N+  L + +N L   P +  K   L  LD+S NRI        
Sbjct: 221 LGNNEFSELPEVLEQIQNLRELWMDNNALQTLPGSIGKLKMLVYLDMSKNRIETVDLDIS 280

Query: 92  ---------------THLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSG 135
                            LP +I     L+TL   +N LT   LP  + NL  L+ F+ S 
Sbjct: 281 GCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTV--LPNAIGNLSLLEEFDCSC 338

Query: 136 NQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLY 195
           N+LE  P  I  + +L+ L +  N L  +PREI     + V+SL  N L  +P+  G + 
Sbjct: 339 NELESLPATIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQ 398

Query: 196 QLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           +L  L LSDN+L++LP S + LK L +L L +N+ + L
Sbjct: 399 KLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 436



 Score = 74.7 bits (182), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 68/217 (31%), Positives = 97/217 (44%), Gaps = 25/217 (11%)

Query: 84  LDLSNNRITHLPQAITNFP--LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQF 141
           LD S+  +  +P+ + NF   L  L    N +  E LPK + N + L+  ++  N L   
Sbjct: 57  LDYSHCGLQQVPKEVFNFERTLEELYLDANQI--EELPKQLFNCQALRKLSIPDNDLSNL 114

Query: 142 PIQILDIPTLKYLYLGNNSLNHVPREINKLCK-LHVLSLGGNSLTDIPDTFGDLYQLEAL 200
           P  I  +  LK L +  N +   P  I K CK L ++    N ++ +PD F  L  L  L
Sbjct: 115 PTTIASLVNLKELDISKNGVQEFPENI-KCCKCLTIIEASVNPISKLPDGFTQLINLTQL 173

Query: 201 ILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS---------------- 244
            L+D  LE LPA+   L  L+ L L  N L+TLP  +  L  L                 
Sbjct: 174 YLNDAFLEFLPANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVL 233

Query: 245 ---EKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
              + L+ L + NN L+TLP  I  LK L  L +  N
Sbjct: 234 EQIQNLRELWMDNNALQTLPGSIGKLKMLVYLDMSKN 270


>gi|417786460|ref|ZP_12434151.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
 gi|409950393|gb|EKO04921.1| leucine rich repeat protein [Leptospira interrogans str. C10069]
          Length = 305

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 92/254 (36%), Positives = 126/254 (49%), Gaps = 11/254 (4%)

Query: 27  LDFSYSSLDSETLATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDL 86
           LD  +  L+ + L T    LP      K  N+  L L  N L  FP    +  NLR L+L
Sbjct: 43  LDVRFLYLNGQKLTT----LPKEIGQLK--NLHDLNLDENPLGAFPKEIGQLENLRVLEL 96

Query: 87  SNNRITHLPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQIL 146
           +NN++   P+ I        +  NN     +L K +  LKNL+   L+ NQL   P +I 
Sbjct: 97  NNNQLKTFPKEIGQLKNLLALYLNNNQLM-TLSKGIGQLKNLQELYLNYNQLTILPNEIG 155

Query: 147 DIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQ 206
            +  L+ L L NN L  + +EI +L  L  L LG N    IP+    L  L+ L L++NQ
Sbjct: 156 QLKNLQALELNNNQLKTLSKEIGQLKNLQRLDLGYNQFKIIPNEIEQLQNLQVLELNNNQ 215

Query: 207 LESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIIT 266
           L +L   I  L+ L+ L L  N+L  LP EI  LK     L+ L L+NN+L+TL  EI  
Sbjct: 216 LTTLSKEIGRLQNLQELYLSYNQLTILPNEIGQLK----NLQVLELNNNQLKTLSKEIGQ 271

Query: 267 LKCLSELSLRDNPL 280
           LK L  L L +N L
Sbjct: 272 LKNLKRLELDNNQL 285



 Score = 85.1 bits (209), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 84/242 (34%), Positives = 112/242 (46%), Gaps = 28/242 (11%)

Query: 94  LPQAITNFPLSTLIARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKY 153
           L +AI N PL       N     +LPK++  LKNL   NL  N L  FP +I  +  L+ 
Sbjct: 35  LTEAIQN-PLDVRFLYLNGQKLTTLPKEIGQLKNLHDLNLDENPLGAFPKEIGQLENLRV 93

Query: 154 LYLGNNSLNHVPRE-----------------------INKLCKLHVLSLGGNSLTDIPDT 190
           L L NN L   P+E                       I +L  L  L L  N LT +P+ 
Sbjct: 94  LELNNNQLKTFPKEIGQLKNLLALYLNNNQLMTLSKGIGQLKNLQELYLNYNQLTILPNE 153

Query: 191 FGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIITLKCLSEKLKSL 250
            G L  L+AL L++NQL++L   I  LK L+ L L  N+ + +P EI  L    + L+ L
Sbjct: 154 IGQLKNLQALELNNNQLKTLSKEIGQLKNLQRLDLGYNQFKIIPNEIEQL----QNLQVL 209

Query: 251 LLHNNKLRTLPTEIITLKCLSELSLRDNPLVIRFVSDMTYKPPSLLELASRTLKVHEIDY 310
            L+NN+L TL  EI  L+ L EL L  N L I        K   +LEL +  LK    + 
Sbjct: 210 ELNNNQLTTLSKEIGRLQNLQELYLSYNQLTILPNEIGQLKNLQVLELNNNQLKTLSKEI 269

Query: 311 SQ 312
            Q
Sbjct: 270 GQ 271



 Score = 42.4 bits (98), Expect = 0.42,   Method: Compositional matrix adjust.
 Identities = 33/97 (34%), Positives = 47/97 (48%), Gaps = 4/97 (4%)

Query: 168 INKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHN 227
           IN  CK+    +   +  D+ +   +   +  L L+  +L +LP  I  LK L  L L  
Sbjct: 16  INLSCKIQTEKVEPKTYRDLTEAIQNPLDVRFLYLNGQKLTTLPKEIGQLKNLHDLNLDE 75

Query: 228 NKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEI 264
           N L   P EI  L    E L+ L L+NN+L+T P EI
Sbjct: 76  NPLGAFPKEIGQL----ENLRVLELNNNQLKTFPKEI 108


>gi|395530455|ref|XP_003767310.1| PREDICTED: leucine-rich repeat-containing protein 7 [Sarcophilus
           harrisii]
          Length = 1442

 Score =  100 bits (249), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 79/221 (35%), Positives = 114/221 (51%), Gaps = 7/221 (3%)

Query: 61  LLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAITNFP-LSTLIARNNLLTAESLP 119
           L L  N+L   P +  K   L  LDL NN  + LP+ +     L  L   NN L  ++LP
Sbjct: 173 LELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLEQIQNLRELWMDNNAL--QTLP 230

Query: 120 KDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSL 179
             +  LK L   ++S N++E   ++I     L+ L L +N L  +P  I  L KL  L +
Sbjct: 231 GSIGKLKMLVYLDMSKNRIETVDLEISGCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKV 290

Query: 180 GGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTLPTEIIT 239
             N LT +P+  G+L  LE    S N+LESLP++I  L  L++L +  N L  LP EI +
Sbjct: 291 DDNQLTVLPNAIGNLSLLEEFDCSCNELESLPSTIGYLHSLRTLAVDENFLPELPREIGS 350

Query: 240 LKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDNPL 280
            K ++     + L +NKL  LP EI  ++ L  L+L DN L
Sbjct: 351 CKNVT----VMSLRSNKLEFLPEEIGQMQKLRVLNLSDNRL 387



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 82/244 (33%), Positives = 123/244 (50%), Gaps = 9/244 (3%)

Query: 40  ATQIELLPNNDYNKKPENIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRITHLPQAIT 99
           A QIE LP   +N   + +  L +  N+LS  P   +   NL+ LD+S N +   P+ I 
Sbjct: 62  ANQIEELPKQLFNC--QALRKLSIPDNDLSNLPTTIASLVNLKELDISKNGVQEFPENIK 119

Query: 100 NFPLSTLI-ARNNLLTAESLPKDMSNLKNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGN 158
                T+I A  N ++   LP   + L NL    L+   LE  P     +  L+ L L  
Sbjct: 120 CCKCLTIIEASVNPIS--KLPDGFTQLINLTQLYLNDAFLEFLPANFGRLVKLRILELRE 177

Query: 159 NSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLPASISNLK 218
           N L  +P+ ++KL +L  L LG N  +++P+    +  L  L + +N L++LP SI  LK
Sbjct: 178 NHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLEQIQNLRELWMDNNALQTLPGSIGKLK 237

Query: 219 MLKSLLLHNNKLRTLPTEIITLKCLSEKLKSLLLHNNKLRTLPTEIITLKCLSELSLRDN 278
           ML  L +  N++ T+  EI    C  E L+ LLL +N L+ LP  I  LK L+ L + DN
Sbjct: 238 MLVYLDMSKNRIETVDLEISG--C--EALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDN 293

Query: 279 PLVI 282
            L +
Sbjct: 294 QLTV 297



 Score = 82.4 bits (202), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 71/218 (32%), Positives = 106/218 (48%), Gaps = 32/218 (14%)

Query: 46  LPNNDYNKKPE------NIDTLLLYHNNLSFFPDNASKFTNLRSLDLSNNRI-------- 91
           L NN++++ PE      N+  L + +N L   P +  K   L  LD+S NRI        
Sbjct: 198 LGNNEFSELPEVLEQIQNLRELWMDNNALQTLPGSIGKLKMLVYLDMSKNRIETVDLEIS 257

Query: 92  ---------------THLPQAITNFP-LSTLIARNNLLTAESLPKDMSNLKNLKVFNLSG 135
                            LP +I     L+TL   +N LT   LP  + NL  L+ F+ S 
Sbjct: 258 GCEALEDLLLSSNMLQQLPDSIGLLKKLTTLKVDDNQLTV--LPNAIGNLSLLEEFDCSC 315

Query: 136 NQLEQFPIQILDIPTLKYLYLGNNSLNHVPREINKLCKLHVLSLGGNSLTDIPDTFGDLY 195
           N+LE  P  I  + +L+ L +  N L  +PREI     + V+SL  N L  +P+  G + 
Sbjct: 316 NELESLPSTIGYLHSLRTLAVDENFLPELPREIGSCKNVTVMSLRSNKLEFLPEEIGQMQ 375

Query: 196 QLEALILSDNQLESLPASISNLKMLKSLLLHNNKLRTL 233
           +L  L LSDN+L++LP S + LK L +L L +N+ + L
Sbjct: 376 KLRVLNLSDNRLKNLPFSFTKLKELAALWLSDNQSKAL 413



 Score = 65.9 bits (159), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 59/206 (28%), Positives = 90/206 (43%), Gaps = 43/206 (20%)

Query: 116 ESLPKDMSNL-KNLKVFNLSGNQLEQFPIQILDIPTLKYLYLGNNSLNHVPREIN----- 169
           + +PK++ N  + L+   L  NQ+E+ P Q+ +   L+ L + +N L+++P  I      
Sbjct: 42  QQVPKEVFNFERTLEELYLDANQIEELPKQLFNCQALRKLSIPDNDLSNLPTTIASLVNL 101

Query: 170 -----------------KLCK-LHVLSLGGNSLTDIPDTFGDLYQLEALILSDNQLESLP 211
                            K CK L ++    N ++ +PD F  L  L  L L+D  LE LP
Sbjct: 102 KELDISKNGVQEFPENIKCCKCLTIIEASVNPISKLPDGFTQLINLTQLYLNDAFLEFLP 161

Query: 212 ASISNLKMLKSLLLHNNKLRTLPTEIITLKCLS-------------------EKLKSLLL 252
           A+   L  L+ L L  N L+TLP  +  L  L                    + L+ L +
Sbjct: 162 ANFGRLVKLRILELRENHLKTLPKSMHKLAQLERLDLGNNEFSELPEVLEQIQNLRELWM 221

Query: 253 HNNKLRTLPTEIITLKCLSELSLRDN 278
            NN L+TLP  I  LK L  L +  N
Sbjct: 222 DNNALQTLPGSIGKLKMLVYLDMSKN 247


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.317    0.134    0.382 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,844,105,024
Number of Sequences: 23463169
Number of extensions: 239231581
Number of successful extensions: 1070151
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 9448
Number of HSP's successfully gapped in prelim test: 28845
Number of HSP's that attempted gapping in prelim test: 738815
Number of HSP's gapped (non-prelim): 144934
length of query: 392
length of database: 8,064,228,071
effective HSP length: 144
effective length of query: 248
effective length of database: 8,980,499,031
effective search space: 2227163759688
effective search space used: 2227163759688
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 78 (34.7 bits)