Query psy3967
Match_columns 324
No_of_seqs 259 out of 1221
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 21:53:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3967.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3967hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2i3h_A Baculoviral IAP repeat- 100.0 6.5E-32 2.2E-36 226.5 7.8 96 163-258 36-131 (133)
2 3hl5_A Baculoviral IAP repeat- 100.0 1.1E-31 3.9E-36 213.9 8.2 90 165-256 4-93 (95)
3 1jd5_A DIAP1, apoptosis 1 inhi 100.0 2.7E-31 9.1E-36 220.8 8.3 93 164-256 15-107 (124)
4 2vm5_A Baculoviral IAP repeat- 100.0 2E-31 6.7E-36 216.4 6.1 94 164-257 10-104 (106)
5 3d9t_A Baculoviral IAP repeat- 100.0 7.1E-31 2.4E-35 210.2 7.5 89 168-256 7-95 (97)
6 3t6p_A Baculoviral IAP repeat- 100.0 2.8E-31 9.6E-36 256.2 6.2 88 171-258 2-89 (345)
7 3mup_A Baculoviral IAP repeat- 100.0 9.2E-31 3.2E-35 217.2 8.2 94 166-259 11-104 (122)
8 3siq_A Apoptosis 1 inhibitor; 100.0 1.1E-30 3.7E-35 219.3 8.7 102 15-123 9-114 (136)
9 1g73_C Inhibitors of apoptosis 100.0 2.2E-30 7.7E-35 214.7 7.3 94 165-260 18-111 (121)
10 1se0_A Apoptosis 1 inhibitor; 100.0 1.5E-28 5E-33 202.4 8.8 92 31-129 7-109 (116)
11 2poi_A Baculoviral IAP repeat- 99.9 3.8E-28 1.3E-32 193.1 7.6 78 168-245 14-91 (94)
12 1i4o_C X-linked IAP, baculovir 99.9 7.8E-28 2.7E-32 204.0 8.6 79 165-243 34-112 (141)
13 3m1d_A Baculoviral IAP repeat- 99.9 4.8E-28 1.6E-32 189.2 5.6 77 170-246 7-83 (85)
14 2qra_D XIAP, baculoviral IAP r 99.9 1.3E-27 4.4E-32 194.9 7.4 78 168-245 31-108 (111)
15 2qfa_A Baculoviral IAP repeat- 99.9 4.2E-27 1.4E-31 200.5 8.1 85 165-249 5-94 (142)
16 1se0_A Apoptosis 1 inhibitor; 99.9 7.4E-27 2.5E-31 192.2 7.1 79 168-247 8-86 (116)
17 2qfa_A Baculoviral IAP repeat- 99.9 6.4E-28 2.2E-32 205.5 -1.1 130 32-198 8-140 (142)
18 3siq_A Apoptosis 1 inhibitor; 99.9 2.2E-26 7.7E-31 193.1 7.1 78 169-247 31-108 (136)
19 2poi_A Baculoviral IAP repeat- 99.9 4.6E-26 1.6E-30 181.1 7.9 76 32-114 14-90 (94)
20 3m1d_A Baculoviral IAP repeat- 99.9 1.9E-26 6.6E-31 180.1 4.7 77 32-115 5-82 (85)
21 1i4o_C X-linked IAP, baculovir 99.9 8.4E-26 2.9E-30 191.5 7.5 86 30-123 35-121 (141)
22 2qra_D XIAP, baculoviral IAP r 99.9 1.1E-25 3.9E-30 183.4 7.7 78 31-115 30-108 (111)
23 2vm5_A Baculoviral IAP repeat- 99.9 2E-25 6.7E-30 181.1 5.6 78 31-115 13-92 (106)
24 3hl5_A Baculoviral IAP repeat- 99.9 2.9E-25 9.8E-30 176.9 6.2 76 32-115 7-82 (95)
25 3d9t_A Baculoviral IAP repeat- 99.9 4.5E-25 1.5E-29 176.5 6.0 77 32-115 7-84 (97)
26 2i3h_A Baculoviral IAP repeat- 99.9 8.1E-25 2.8E-29 183.4 6.2 79 30-115 39-118 (133)
27 1jd5_A DIAP1, apoptosis 1 inhi 99.9 8.4E-25 2.9E-29 181.6 6.1 78 31-115 18-96 (124)
28 1g73_C Inhibitors of apoptosis 99.9 1E-24 3.6E-29 180.6 6.1 77 31-115 20-96 (121)
29 3mup_A Baculoviral IAP repeat- 99.9 1.7E-24 5.8E-29 179.5 6.2 77 32-115 13-90 (122)
30 3t6p_A Baculoviral IAP repeat- 99.8 3.8E-21 1.3E-25 185.5 6.2 266 35-323 2-320 (345)
31 2ea5_A Cell growth regulator w 98.3 2.2E-07 7.7E-12 68.7 2.8 28 296-323 13-40 (68)
32 2vje_A E3 ubiquitin-protein li 97.9 4.3E-06 1.5E-10 60.8 1.9 27 297-323 7-35 (64)
33 2vje_B MDM4 protein; proto-onc 97.8 5.4E-06 1.8E-10 60.1 2.0 27 297-323 6-34 (63)
34 2yho_A E3 ubiquitin-protein li 97.8 5.5E-06 1.9E-10 62.9 1.5 29 295-323 15-43 (79)
35 4ic3_A E3 ubiquitin-protein li 97.5 2.6E-05 8.9E-10 58.1 1.5 29 295-323 21-49 (74)
36 2ecg_A Baculoviral IAP repeat- 97.3 2.2E-05 7.5E-10 58.5 -0.9 29 295-323 22-50 (75)
37 2d8t_A Dactylidin, ring finger 96.0 0.0062 2.1E-07 44.2 4.1 26 296-321 13-38 (71)
38 2ysl_A Tripartite motif-contai 96.0 0.0058 2E-07 44.3 3.9 28 294-321 16-43 (73)
39 2ysj_A Tripartite motif-contai 95.9 0.0051 1.7E-07 43.5 3.3 28 294-321 16-43 (63)
40 2ecn_A Ring finger protein 141 95.8 0.0063 2.2E-07 43.9 3.5 26 295-321 12-37 (70)
41 2ct2_A Tripartite motif protei 95.5 0.013 4.5E-07 43.8 4.3 28 294-321 11-42 (88)
42 2csy_A Zinc finger protein 183 95.4 0.013 4.4E-07 43.5 3.9 26 296-321 13-38 (81)
43 2ecj_A Tripartite motif-contai 95.3 0.0059 2E-07 42.1 1.6 28 294-321 11-38 (58)
44 2ea6_A Ring finger protein 4; 95.0 0.013 4.3E-07 41.7 2.6 27 295-321 12-45 (69)
45 2yur_A Retinoblastoma-binding 94.8 0.02 6.7E-07 41.9 3.3 28 294-321 11-39 (74)
46 2djb_A Polycomb group ring fin 94.8 0.02 6.9E-07 41.5 3.3 28 294-321 11-39 (72)
47 2ecw_A Tripartite motif-contai 94.7 0.018 6E-07 42.6 2.8 28 294-321 15-42 (85)
48 2ecv_A Tripartite motif-contai 94.5 0.014 4.8E-07 43.1 1.8 28 294-321 15-42 (85)
49 2egp_A Tripartite motif-contai 94.4 0.011 3.9E-07 43.3 1.1 28 294-321 8-35 (79)
50 1bor_A Transcription factor PM 94.3 0.0096 3.3E-07 41.4 0.5 25 297-321 5-29 (56)
51 2kiz_A E3 ubiquitin-protein li 94.2 0.04 1.4E-06 39.4 3.7 26 296-321 12-40 (69)
52 2ecm_A Ring finger and CHY zin 94.1 0.028 9.6E-07 38.2 2.5 24 298-321 5-32 (55)
53 1chc_A Equine herpes virus-1 r 94.1 0.022 7.5E-07 40.6 2.0 24 298-321 5-29 (68)
54 4ayc_A E3 ubiquitin-protein li 94.0 0.021 7.2E-07 47.0 2.1 25 297-321 52-76 (138)
55 2ect_A Ring finger protein 126 93.7 0.06 2.1E-06 39.4 3.9 27 295-321 12-41 (78)
56 2ecy_A TNF receptor-associated 93.6 0.021 7.1E-07 40.7 1.2 27 295-321 12-38 (66)
57 2ep4_A Ring finger protein 24; 93.5 0.073 2.5E-06 38.5 4.1 27 295-321 12-41 (74)
58 2y1n_A E3 ubiquitin-protein li 93.3 0.037 1.3E-06 53.8 2.8 24 298-321 332-355 (389)
59 3ztg_A E3 ubiquitin-protein li 93.1 0.049 1.7E-06 41.2 2.7 28 294-321 9-37 (92)
60 1iym_A EL5; ring-H2 finger, ub 92.8 0.05 1.7E-06 37.0 2.0 25 297-321 4-32 (55)
61 3ng2_A RNF4, snurf, ring finge 92.4 0.045 1.5E-06 39.1 1.5 25 297-321 9-40 (71)
62 2xeu_A Ring finger protein 4; 92.4 0.046 1.6E-06 38.1 1.6 24 298-321 3-33 (64)
63 2l0b_A E3 ubiquitin-protein li 92.3 0.096 3.3E-06 39.8 3.3 26 296-321 38-66 (91)
64 1x4j_A Ring finger protein 38; 92.3 0.1 3.5E-06 37.9 3.3 26 296-321 21-49 (75)
65 3l11_A E3 ubiquitin-protein li 92.2 0.053 1.8E-06 42.9 1.9 27 295-321 12-38 (115)
66 1g25_A CDK-activating kinase a 91.9 0.042 1.4E-06 38.9 0.8 24 298-321 3-31 (65)
67 3fl2_A E3 ubiquitin-protein li 91.6 0.066 2.3E-06 42.9 1.8 26 296-321 50-75 (124)
68 1t1h_A Gspef-atpub14, armadill 91.4 0.14 4.9E-06 37.3 3.3 26 296-321 6-31 (78)
69 1e4u_A Transcriptional repress 91.1 0.056 1.9E-06 40.5 0.8 27 295-321 8-38 (78)
70 3hct_A TNF receptor-associated 90.5 0.16 5.4E-06 40.4 3.0 28 294-321 14-41 (118)
71 1z6u_A NP95-like ring finger p 90.1 0.11 3.7E-06 43.6 1.8 25 297-321 77-101 (150)
72 2ckl_A Polycomb group ring fin 89.8 0.17 5.9E-06 39.4 2.6 27 295-321 12-39 (108)
73 2ckl_B Ubiquitin ligase protei 89.7 0.12 4.1E-06 43.5 1.7 28 294-321 50-78 (165)
74 3lrq_A E3 ubiquitin-protein li 89.5 0.12 4.3E-06 39.9 1.6 27 295-321 19-46 (100)
75 1jm7_A BRCA1, breast cancer ty 89.4 0.057 2E-06 42.1 -0.4 25 297-321 20-44 (112)
76 2y43_A E3 ubiquitin-protein li 89.1 0.15 5.1E-06 39.1 1.8 27 295-321 19-46 (99)
77 2kr4_A Ubiquitin conjugation f 88.1 0.49 1.7E-05 35.6 4.1 28 294-321 10-37 (85)
78 1rmd_A RAG1; V(D)J recombinati 86.1 0.29 9.9E-06 38.6 1.8 27 295-321 20-46 (116)
79 1jm7_B BARD1, BRCA1-associated 85.3 0.16 5.6E-06 40.3 -0.0 27 295-321 19-46 (117)
80 1wgm_A Ubiquitin conjugation f 83.8 1.5 5.1E-05 33.9 4.9 28 294-321 18-46 (98)
81 3knv_A TNF receptor-associated 82.1 0.63 2.2E-05 38.4 2.3 28 294-321 27-54 (141)
82 2ecl_A Ring-box protein 2; RNF 81.2 0.62 2.1E-05 34.5 1.7 24 298-321 15-53 (81)
83 2kre_A Ubiquitin conjugation f 80.8 1.4 4.7E-05 34.2 3.7 28 294-321 25-52 (100)
84 1v87_A Deltex protein 2; ring- 79.6 0.91 3.1E-05 35.4 2.3 23 299-321 26-66 (114)
85 4ap4_A E3 ubiquitin ligase RNF 74.3 1.2 4E-05 35.1 1.6 25 297-321 71-102 (133)
86 2yu4_A E3 SUMO-protein ligase 73.9 2.5 8.4E-05 32.1 3.3 25 297-321 6-31 (94)
87 2d8s_A Cellular modulator of i 73.8 2 6.9E-05 32.0 2.7 24 297-320 14-44 (80)
88 2c2l_A CHIP, carboxy terminus 71.8 3 0.0001 37.1 3.8 26 296-321 206-231 (281)
89 3dpl_R Ring-box protein 1; ubi 66.6 2.5 8.4E-05 33.2 1.8 12 310-321 67-78 (106)
90 2f42_A STIP1 homology and U-bo 60.8 5.5 0.00019 34.3 3.1 27 295-321 103-129 (179)
91 1vyx_A ORF K3, K3RING; zinc-bi 59.1 2.3 8E-05 29.8 0.4 22 297-318 5-26 (60)
92 4a0k_B E3 ubiquitin-protein li 47.5 4.2 0.00014 32.6 0.2 22 299-320 49-88 (117)
93 1ef4_A Subunit N, DNA-directed 46.1 2.9 9.8E-05 29.3 -0.9 11 210-220 4-14 (55)
94 1twf_J DNA-directed RNA polyme 43.0 5.1 0.00018 29.4 0.0 12 209-220 4-15 (70)
95 4ayb_N DNA-directed RNA polyme 33.7 8.2 0.00028 28.0 -0.1 15 80-94 5-20 (66)
96 2bay_A PRE-mRNA splicing facto 25.8 32 0.0011 23.8 1.9 23 299-321 4-27 (61)
97 3htk_C E3 SUMO-protein ligase 24.4 81 0.0028 28.8 4.7 27 295-321 178-205 (267)
No 1
>2i3h_A Baculoviral IAP repeat-containing protein 7; zinc binding, peptide complex, apoptosis inhibition, peptidomimetic, small molecule, drug design, inhibitor/apoptosis complex; HET: BTB; 1.62A {Homo sapiens} SCOP: g.52.1.1 PDB: 2i3i_A* 3f7h_A* 3f7i_A* 3gt9_A* 3gta_A* 1tw6_A* 3uw5_A* 3f7g_A* 1oxn_A* 1oxq_A* 1oy7_A*
Probab=99.97 E-value=6.5e-32 Score=226.49 Aligned_cols=96 Identities=46% Similarity=0.948 Sum_probs=87.6
Q ss_pred CCCCCCCCCCCCHHHHHhccccCCCCCCCChHHHHHcCCcccCCCCceEEeeeCCcccCCCCCCChHHHHHhhcCCCchh
Q psy3967 163 KNSPPAFPNYATYESRLRSFDSWPISLRLKPVTLTEAGFFYTGKADQTLCFRCGGGLKHWEETDDPWTEHARWFSSCPYV 242 (324)
Q Consensus 163 ~~~~p~~~~y~~~~~Rl~SF~~Wp~~~~~~~~~LA~AGFyytg~~D~v~Cf~Cg~~l~~W~~~DdP~~eH~~~~p~C~f~ 242 (324)
....|.++.|.++++||+||.+||....+++++||+|||||+|.+|.|+||+|+++|.+|+++||||+||++|+|+|.|+
T Consensus 36 ~~~~~~~~~m~~e~~RL~SF~~WP~~~~~~pe~LA~AGFYYtg~~D~V~Cf~C~~~L~~We~~DDP~~EH~r~~P~C~Fv 115 (133)
T 2i3h_A 36 LSRGPAFPGMGSEELRLASFYDWPLTAEVPPELLAAAGFFHTGHQDKVRCFFCYGGLQSWKRGDDPWTEHAKWFPGCQFL 115 (133)
T ss_dssp ---CCSCGGGCCHHHHHHTTTTCSCTTTSCHHHHHHTTEEECSSTTCEEETTTCCEEECCCTTCCHHHHHHHHCTTCHHH
T ss_pred cCCCCCchhhhCHHHHHHHHhcCCCCcCCCHHHHHHcCCCCcCCCCEEEecccCCEeCCCCCCCCHHHHHHHHCcCCcee
Confidence 34578899999999999999999987678999999999999999999999999999999999999999999999999999
Q ss_pred hhccchhHHHhhhccc
Q psy3967 243 KLVKGQEFINQVIGHK 258 (324)
Q Consensus 243 ~~~kg~~~i~~v~~~~ 258 (324)
+..||++||++|+.++
T Consensus 116 ~~~Kg~~fv~~v~~~~ 131 (133)
T 2i3h_A 116 LRSKGQEYINNIHLTH 131 (133)
T ss_dssp HHHHCHHHHHHHC---
T ss_pred hhcccHHHHHHHhhhC
Confidence 9999999999998654
No 2
>3hl5_A Baculoviral IAP repeat-containing protein 4; BIR, apoptosis, small molecule drug discovery, structur drug design, ligase, metal-binding; HET: 9JZ; 1.80A {Homo sapiens} PDB: 1nw9_A 2vsl_A
Probab=99.97 E-value=1.1e-31 Score=213.94 Aligned_cols=90 Identities=41% Similarity=0.961 Sum_probs=86.0
Q ss_pred CCCCCCCCCCHHHHHhccccCCCCCCCChHHHHHcCCcccCCCCceEEeeeCCcccCCCCCCChHHHHHhhcCCCchhhh
Q psy3967 165 SPPAFPNYATYESRLRSFDSWPISLRLKPVTLTEAGFFYTGKADQTLCFRCGGGLKHWEETDDPWTEHARWFSSCPYVKL 244 (324)
Q Consensus 165 ~~p~~~~y~~~~~Rl~SF~~Wp~~~~~~~~~LA~AGFyytg~~D~v~Cf~Cg~~l~~W~~~DdP~~eH~~~~p~C~f~~~ 244 (324)
..|.+|.|.++++|++||.+||+. +++++||+|||||+|.+|.|+||+|+++|.+|+++||||+||++|+|+|.|++.
T Consensus 4 ~~p~~~~m~~~~~Rl~TF~~Wp~~--~~~~~LA~AGFyy~g~~D~v~Cf~C~~~l~~We~~DdP~~eH~r~~p~C~f~~~ 81 (95)
T 3hl5_A 4 MLPRNPSMADYEARIFTFGTWIYS--VNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLE 81 (95)
T ss_dssp SSCSCGGGCSHHHHHHTTTTCCSS--SCHHHHHHTTEEECSSTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCHHHHH
T ss_pred CCCCCccccCHHHHHHHHcCCCCC--CCHHHHHhCCCeEcCCCCeEEecCCCCCccCcCCCCCHHHHHHHHCcCCcchHh
Confidence 357899999999999999999986 689999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHhhhc
Q psy3967 245 VKGQEFINQVIG 256 (324)
Q Consensus 245 ~kg~~~i~~v~~ 256 (324)
.||++||++|+.
T Consensus 82 ~kg~~fv~~i~~ 93 (95)
T 3hl5_A 82 QKGQEYINNIHL 93 (95)
T ss_dssp HTCHHHHHHHTT
T ss_pred hccHHHHHHHHc
Confidence 999999999874
No 3
>1jd5_A DIAP1, apoptosis 1 inhibitor; IAP, caspase activation; 1.90A {Drosophila melanogaster} SCOP: g.52.1.1 PDB: 1jd4_A 1jd6_A 1q4q_A
Probab=99.97 E-value=2.7e-31 Score=220.76 Aligned_cols=93 Identities=52% Similarity=1.132 Sum_probs=89.0
Q ss_pred CCCCCCCCCCCHHHHHhccccCCCCCCCChHHHHHcCCcccCCCCceEEeeeCCcccCCCCCCChHHHHHhhcCCCchhh
Q psy3967 164 NSPPAFPNYATYESRLRSFDSWPISLRLKPVTLTEAGFFYTGKADQTLCFRCGGGLKHWEETDDPWTEHARWFSSCPYVK 243 (324)
Q Consensus 164 ~~~p~~~~y~~~~~Rl~SF~~Wp~~~~~~~~~LA~AGFyytg~~D~v~Cf~Cg~~l~~W~~~DdP~~eH~~~~p~C~f~~ 243 (324)
...|.++.|.++++||+||.+||....+++++||+|||||+|.+|.|+||+|+++|.+|+++||||+||++|+|+|.|++
T Consensus 15 ~~~p~~p~~~~e~~Rl~TF~~WP~~~~~~p~~LA~AGFyYtg~~D~V~Cf~C~~~L~~We~~DdP~~EH~r~~P~C~Fv~ 94 (124)
T 1jd5_A 15 NYFPQYPEYAIETARLRTFEAWPRNLKQKPHQLAEAGFFYTGVGDRVRCFSCGGGLMDWNDNDEPWEQHALWLSQCRFVK 94 (124)
T ss_dssp CCCCSCGGGCSHHHHHHHGGGCCTTCSSCHHHHHHTTEEECSSTTCEEETTTCCEEECCCTTCCHHHHHHHHCTTCHHHH
T ss_pred CCCCCChhhhCHHHHHHHHhhCCCCccCCHHHHHHcCCCCcCCCCEEEecCCCCEecCCCCCCCHHHHHHHHCcCCceee
Confidence 35688999999999999999999987788999999999999999999999999999999999999999999999999999
Q ss_pred hccchhHHHhhhc
Q psy3967 244 LVKGQEFINQVIG 256 (324)
Q Consensus 244 ~~kg~~~i~~v~~ 256 (324)
++||++||+++..
T Consensus 95 ~~kg~~fv~~v~~ 107 (124)
T 1jd5_A 95 LMKGQLYIDTVAA 107 (124)
T ss_dssp HHHCHHHHHHHHH
T ss_pred cccchHHHHHHHh
Confidence 9999999999986
No 4
>2vm5_A Baculoviral IAP repeat-containing protein 1; apoptosis; 1.80A {Homo sapiens}
Probab=99.97 E-value=2e-31 Score=216.43 Aligned_cols=94 Identities=45% Similarity=0.924 Sum_probs=85.2
Q ss_pred CCCCCCCCCCCHHHHHhccccCCCCCC-CChHHHHHcCCcccCCCCceEEeeeCCcccCCCCCCChHHHHHhhcCCCchh
Q psy3967 164 NSPPAFPNYATYESRLRSFDSWPISLR-LKPVTLTEAGFFYTGKADQTLCFRCGGGLKHWEETDDPWTEHARWFSSCPYV 242 (324)
Q Consensus 164 ~~~p~~~~y~~~~~Rl~SF~~Wp~~~~-~~~~~LA~AGFyytg~~D~v~Cf~Cg~~l~~W~~~DdP~~eH~~~~p~C~f~ 242 (324)
+..|.++.|.++++|++||.+||.... +++++||+|||||+|.+|.|+||+|+++|.+|+++||||+||++|+|+|.|+
T Consensus 10 ~~~~~~~~~~~~~~Rl~TF~~WP~~~~~~~p~~LA~AGFyy~g~~D~V~Cf~C~~~L~~We~~DdP~~eH~r~~p~C~Fv 89 (106)
T 2vm5_A 10 RLRGGKMRYQEEEARLASFRNWPFYVQGISPCVLSEAGFVFTGKQDTVQCFSCGGCLGNWEEGDDPWKEHAKWFPKCEFL 89 (106)
T ss_dssp CCC---CTTSSHHHHHHGGGGCCGGGTTSCHHHHHHTTEEECSSTTCEEETTTCCEEESCCTTCCHHHHHHHHCTTCHHH
T ss_pred CCCCCchhhcCHHHHHHHHhcCCCCcccCCHHHHHHcCCCCcCCCCEEEccccCCEecCCCCCCCHHHHHHHHCcCCcch
Confidence 346888999999999999999998754 7899999999999999999999999999999999999999999999999999
Q ss_pred hhccchhHHHhhhcc
Q psy3967 243 KLVKGQEFINQVIGH 257 (324)
Q Consensus 243 ~~~kg~~~i~~v~~~ 257 (324)
+..||.+||+++++.
T Consensus 90 ~~~Kg~~~i~~~~~~ 104 (106)
T 2vm5_A 90 RSKKSSEEITQYIQS 104 (106)
T ss_dssp HHHHCCTTSCCCCCC
T ss_pred hhccCHHHHHHHHHh
Confidence 999999999887754
No 5
>3d9t_A Baculoviral IAP repeat-containing protein 2; zinc finger, apoptosis, cytoplasm, metal-binding, polymorphism, zinc, zinc-finger, alternative splicing, hydrolase, protease; 1.50A {Homo sapiens} SCOP: g.52.1.1 PDB: 3d9u_A 3uw4_A* 2uvl_A
Probab=99.96 E-value=7.1e-31 Score=210.17 Aligned_cols=89 Identities=44% Similarity=1.031 Sum_probs=84.1
Q ss_pred CCCCCCCHHHHHhccccCCCCCCCChHHHHHcCCcccCCCCceEEeeeCCcccCCCCCCChHHHHHhhcCCCchhhhccc
Q psy3967 168 AFPNYATYESRLRSFDSWPISLRLKPVTLTEAGFFYTGKADQTLCFRCGGGLKHWEETDDPWTEHARWFSSCPYVKLVKG 247 (324)
Q Consensus 168 ~~~~y~~~~~Rl~SF~~Wp~~~~~~~~~LA~AGFyytg~~D~v~Cf~Cg~~l~~W~~~DdP~~eH~~~~p~C~f~~~~kg 247 (324)
.+..|.++++|++||.+||....+++++||+|||||+|.+|.|+||+|+++|.+|+++||||+||++|+|+|.|++.+||
T Consensus 7 ~~~~m~~~~~Rl~TF~~Wp~~~~~~~~~LA~AGFyy~g~~D~v~Cf~C~~~l~~We~~Ddp~~eH~r~~p~C~f~~~~kg 86 (97)
T 3d9t_A 7 SNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKG 86 (97)
T ss_dssp -CGGGCSHHHHHHGGGGCCTTSSSCHHHHHHTTEEECSSTTCEEETTTCCEEECCCTTCCHHHHHHHHCTTBHHHHHHHC
T ss_pred cchhhhCHHHHHHHHhcCCCcccCCHHHHHHcCCCCcCCCCEEEecCcCCEecCCCCCCCHHHHHHHhCccChhhHhhcc
Confidence 45568999999999999998877889999999999999999999999999999999999999999999999999999999
Q ss_pred hhHHHhhhc
Q psy3967 248 QEFINQVIG 256 (324)
Q Consensus 248 ~~~i~~v~~ 256 (324)
++||++++.
T Consensus 87 ~~~v~~~~~ 95 (97)
T 3d9t_A 87 QEFVDEIQG 95 (97)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHh
Confidence 999999985
No 6
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=99.96 E-value=2.8e-31 Score=256.17 Aligned_cols=88 Identities=44% Similarity=1.061 Sum_probs=83.6
Q ss_pred CCCCHHHHHhccccCCCCCCCChHHHHHcCCcccCCCCceEEeeeCCcccCCCCCCChHHHHHhhcCCCchhhhccchhH
Q psy3967 171 NYATYESRLRSFDSWPISLRLKPVTLTEAGFFYTGKADQTLCFRCGGGLKHWEETDDPWTEHARWFSSCPYVKLVKGQEF 250 (324)
Q Consensus 171 ~y~~~~~Rl~SF~~Wp~~~~~~~~~LA~AGFyytg~~D~v~Cf~Cg~~l~~W~~~DdP~~eH~~~~p~C~f~~~~kg~~~ 250 (324)
.|.++++|++||.+||+...+++++||+|||||+|.+|.|+||+|+++|.+|+++||||+||++|+|+|+|++..||++|
T Consensus 2 ~m~~~~~Rl~tF~~WP~~~~~~~~~lA~AGFyy~g~~D~v~Cf~C~~~l~~We~~DdP~~eH~~~~p~C~f~~~~kg~~~ 81 (345)
T 3t6p_A 2 SMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCFSCDGGLRCWESGDDPWVEHAKWFPRCEFLIRMKGQEF 81 (345)
T ss_dssp TTSSHHHHHHHGGGSCTTCSSCHHHHHHTTEEECSSTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCHHHHHHHCHHH
T ss_pred CCccHHHHHHHHhhCCCcccCCHHHHHhCCCeecCCCCeEEecCCCCCccCCCCCCCHHHHHHHhCCCCccHHHhccHHH
Confidence 36789999999999998877899999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhhccc
Q psy3967 251 INQVIGHK 258 (324)
Q Consensus 251 i~~v~~~~ 258 (324)
|++|+..+
T Consensus 82 i~~~~~~~ 89 (345)
T 3t6p_A 82 VDEIQGRY 89 (345)
T ss_dssp HHHHHHHS
T ss_pred HHHHHHhC
Confidence 99998643
No 7
>3mup_A Baculoviral IAP repeat-containing protein 2; zinc-finger motif, apoptosis inhibitor; HET: SMK; 2.60A {Homo sapiens} SCOP: g.52.1.1 PDB: 3oz1_A* 4eb9_A*
Probab=99.96 E-value=9.2e-31 Score=217.18 Aligned_cols=94 Identities=41% Similarity=0.961 Sum_probs=88.7
Q ss_pred CCCCCCCCCHHHHHhccccCCCCCCCChHHHHHcCCcccCCCCceEEeeeCCcccCCCCCCChHHHHHhhcCCCchhhhc
Q psy3967 166 PPAFPNYATYESRLRSFDSWPISLRLKPVTLTEAGFFYTGKADQTLCFRCGGGLKHWEETDDPWTEHARWFSSCPYVKLV 245 (324)
Q Consensus 166 ~p~~~~y~~~~~Rl~SF~~Wp~~~~~~~~~LA~AGFyytg~~D~v~Cf~Cg~~l~~W~~~DdP~~eH~~~~p~C~f~~~~ 245 (324)
.+.++.|.++++|++||.+||....+++++||+|||||+|.+|.|+||+|+++|.+|+++||||+||++|+|+|.|++.+
T Consensus 11 ~~~~~~m~s~~~Rl~TF~~WP~~~~~~p~~LA~AGFyy~g~~D~V~Cf~C~~~L~~We~~DdP~~EH~r~~P~C~Fv~~~ 90 (122)
T 3mup_A 11 SISNLSMQTHAARMRTFMYWPSSVPVQPEQLASAGFYYVGRNDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCEFLIRM 90 (122)
T ss_dssp CCSCGGGCSHHHHHHGGGGCCTTCSSCHHHHHHTTEEECSSTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCHHHHHH
T ss_pred CcCCccccCHHHHHHHHhcCCCcccCCHHHHHHCCCeEeCCCCeEEecCcCCEecCCCCCCCHHHHHHHHCcCCcchhhc
Confidence 46678899999999999999988778999999999999999999999999999999999999999999999999999999
Q ss_pred cchhHHHhhhcccc
Q psy3967 246 KGQEFINQVIGHKE 259 (324)
Q Consensus 246 kg~~~i~~v~~~~~ 259 (324)
||++||++|+..++
T Consensus 91 kg~~fi~~i~~~~~ 104 (122)
T 3mup_A 91 KGQEFVDEIQGRYP 104 (122)
T ss_dssp HCHHHHHHHHHHCT
T ss_pred CcHHHHHHHHHhch
Confidence 99999999997543
No 8
>3siq_A Apoptosis 1 inhibitor; DIAP1-BIR1 domain, ligase; 2.40A {Drosophila melanogaster}
Probab=99.96 E-value=1.1e-30 Score=219.32 Aligned_cols=102 Identities=41% Similarity=0.852 Sum_probs=81.9
Q ss_pred ccCCCCCcccccccc----cccccCCcCHHHHHhccCCCCCCCCcCHHHHHHcCceecCCCCCCCCCCeEeecccCceec
Q psy3967 15 TNMNDNRSTSTLLDK----CSRKQNMTLECDRLDSFKNSWPLTYLSAKQMAAAGFYFLGKKENGRFSDDVKCIFCGIELG 90 (324)
Q Consensus 15 ~~~~~~~~~~~~~~~----~~~~~~~~~e~~RL~SF~~~Wp~~~~~~~~LA~aGFyy~g~~~~~~~~D~V~C~~C~~~l~ 90 (324)
++|+||++.+++++| +..+.+|.+|++||+||.+ ||+..+++++||+|||||+|. +|+|+||+|+++|.
T Consensus 9 ~~~~~n~~~~~~~~~~~~~~~~~~dy~~e~~RL~TF~~-WP~~~~~p~~LA~AGFYYtG~------~D~V~Cf~C~~~L~ 81 (136)
T 3siq_A 9 FDQVDNNTNATQLFKNNINKTRMNDLNREETRLKTFTD-WPLDWLDKRQLAQTGMYFTHA------GDKVKCFFCGVEIG 81 (136)
T ss_dssp ---------------------CCCCTTBHHHHHHTTTT-CCCTTSCHHHHHHTTEEECSS------TTCEEETTTCCEEE
T ss_pred hhhhccchhhHHhhccCcccccHHhhhCHHHHHHHHcc-CCCCcCCHHHHHHCCCeEcCC------CCeEEEeccCCEec
Confidence 699999999999998 2368889999999999999 999889999999999999999 99999999999999
Q ss_pred cccCCCChhhhhcccCCCCccccccccCCccCC
Q psy3967 91 KWVQGDDPLKDHEKWSPNCWFLRRLKKGNTESA 123 (324)
Q Consensus 91 ~w~~~Ddp~~eH~~~sP~C~f~~~~~~~Nv~~~ 123 (324)
+|+++|||+++|++|+|.|+|++...++|||+.
T Consensus 82 ~We~~DdP~~EH~r~sP~C~Fv~~~~~~Nvpi~ 114 (136)
T 3siq_A 82 SWEQEDQPVPEHQRWSPNCPLLRRRTTNNVPIN 114 (136)
T ss_dssp CCCTTCCHHHHHHHHCTTCTTTTTCCCCCBCSC
T ss_pred CCCCCCCHHHHHHHHCcCCcceecccCCCccCC
Confidence 999999999999999999999999999999874
No 9
>1g73_C Inhibitors of apoptosis-like protein ILP; helix bundle, zinc-binding domain, apoptosis/apoptosis inhibitor complex; 2.00A {Homo sapiens} SCOP: g.52.1.1 PDB: 3cm2_D* 3clx_D* 3cm7_C* 1f9x_A 1g3f_A 1tfq_A* 1tft_A* 3eyl_A* 3g76_A* 2jk7_A* 2opz_A 2opy_A* 1xb0_A 1xb1_A
Probab=99.96 E-value=2.2e-30 Score=214.67 Aligned_cols=94 Identities=39% Similarity=0.936 Sum_probs=86.2
Q ss_pred CCCCCCCCCCHHHHHhccccCCCCCCCChHHHHHcCCcccCCCCceEEeeeCCcccCCCCCCChHHHHHhhcCCCchhhh
Q psy3967 165 SPPAFPNYATYESRLRSFDSWPISLRLKPVTLTEAGFFYTGKADQTLCFRCGGGLKHWEETDDPWTEHARWFSSCPYVKL 244 (324)
Q Consensus 165 ~~p~~~~y~~~~~Rl~SF~~Wp~~~~~~~~~LA~AGFyytg~~D~v~Cf~Cg~~l~~W~~~DdP~~eH~~~~p~C~f~~~ 244 (324)
..|.++.|.++++|++||.+||+. +++++||+|||||+|.+|.|+||+|+++|.+|+++||||+||++|+|+|.|++.
T Consensus 18 ~~p~~~~m~~~~~Rl~TF~~Wp~~--~~p~~LA~AGFyy~g~~D~V~Cf~C~~~L~~We~~DdP~~eH~r~~P~C~Fv~~ 95 (121)
T 1g73_C 18 NLPRNPSMADYEARIFTFGTWIYS--VNKEQLARAGFYALGEGDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKYLLE 95 (121)
T ss_dssp -CCSCGGGCSHHHHHHTTTTCCSS--SCHHHHHHTTEEECSSTTCEEETTTCCEEESCCTTCCHHHHHHHHCTTCHHHHH
T ss_pred CCCCChhhhCHHHHHHHHccCCCC--CCHHHHHHcCCCCcCCCCEEEcCcCCCCcCCCCCCCCHHHHHHHHCcCCcchhh
Confidence 468899999999999999999987 689999999999999999999999999999999999999999999999999999
Q ss_pred ccchhHHHhhhccccc
Q psy3967 245 VKGQEFINQVIGHKEV 260 (324)
Q Consensus 245 ~kg~~~i~~v~~~~~~ 260 (324)
.||.+||++++.+.++
T Consensus 96 ~kg~~~v~~v~~~~p~ 111 (121)
T 1g73_C 96 QKGQEYINNIHLTHSL 111 (121)
T ss_dssp HHHHHHHHHHTC----
T ss_pred ccchhhhccccccCCC
Confidence 9999999999976544
No 10
>1se0_A Apoptosis 1 inhibitor; apoptosis, IAP, BIR, caspase; 1.75A {Drosophila melanogaster} SCOP: g.52.1.1 PDB: 1sdz_A 3sip_E
Probab=99.95 E-value=1.5e-28 Score=202.39 Aligned_cols=92 Identities=45% Similarity=1.020 Sum_probs=82.4
Q ss_pred ccccCCcCHHHHHhccCCCCCCCCcCHHHHHHcCceecCCCCCCCCCCeEeecccCceeccccCCCChhhhhcccCCCCc
Q psy3967 31 SRKQNMTLECDRLDSFKNSWPLTYLSAKQMAAAGFYFLGKKENGRFSDDVKCIFCGIELGKWVQGDDPLKDHEKWSPNCW 110 (324)
Q Consensus 31 ~~~~~~~~e~~RL~SF~~~Wp~~~~~~~~LA~aGFyy~g~~~~~~~~D~V~C~~C~~~l~~w~~~Ddp~~eH~~~sP~C~ 110 (324)
.++.+|.++++||+||.+ ||+..+++++||+|||||+|. +|.|+||+|++.|.+|+++|||+++|++|+|.|+
T Consensus 7 ~~~~~~~~e~~Rl~TF~~-WP~~~~~~~~LA~AGFyy~g~------~D~V~Cf~C~~~L~~We~~DdP~~eH~r~~p~C~ 79 (116)
T 1se0_A 7 TRMNDLNREETRLKTFTD-WPLDWLDKRQLAQTGMYFTHA------GDKVKCFFCGVEIGSWEQEDQPVPEHQRWSPNCP 79 (116)
T ss_dssp ---CCTTBHHHHHTTCTT-CCCTTSCHHHHHHTTEEECSS------TTCEEETTTCCEEESCCTTCCHHHHHHHHCTTCT
T ss_pred hhhhhhcCHHHHHHHHhh-CCCCcCCHHHHHHcCCcCcCC------CCEEEecCcCCEecCCCCCCCHHHHHHHHCccCc
Confidence 366789999999999999 999888999999999999999 9999999999999999999999999999999999
Q ss_pred cccccccCCccCC-----------CcCCCC
Q psy3967 111 FLRRLKKGNTESA-----------GYDTCG 129 (324)
Q Consensus 111 f~~~~~~~Nv~~~-----------~~d~~~ 129 (324)
|++....+|+++. ++|+||
T Consensus 80 Fv~~~~~~nvp~~~~~~~~~~~~~~~d~cg 109 (116)
T 1se0_A 80 LLRRRTTNNVPINAEALDRILPPISYDICG 109 (116)
T ss_dssp TTTTCCCCCBCSCHHHHHHHSCCCCCC---
T ss_pred ceeeeccCccccCCCcccccCCCCCccccC
Confidence 9999999999874 678887
No 11
>2poi_A Baculoviral IAP repeat-containing protein 4; zinc finger, signaling protein/apoptosis complex; 1.80A {Homo sapiens} PDB: 2pop_B
Probab=99.95 E-value=3.8e-28 Score=193.08 Aligned_cols=78 Identities=26% Similarity=0.584 Sum_probs=72.1
Q ss_pred CCCCCCCHHHHHhccccCCCCCCCChHHHHHcCCcccCCCCceEEeeeCCcccCCCCCCChHHHHHhhcCCCchhhhc
Q psy3967 168 AFPNYATYESRLRSFDSWPISLRLKPVTLTEAGFFYTGKADQTLCFRCGGGLKHWEETDDPWTEHARWFSSCPYVKLV 245 (324)
Q Consensus 168 ~~~~y~~~~~Rl~SF~~Wp~~~~~~~~~LA~AGFyytg~~D~v~Cf~Cg~~l~~W~~~DdP~~eH~~~~p~C~f~~~~ 245 (324)
.+++|.++++|++||.+||+...+++++||+|||||+|.+|.|+||+|+++|.+|+++||||+||++|+|+|.|++.+
T Consensus 14 ~~~~~~~e~~Rl~TF~~WP~~~~~~p~~LA~AGFyytg~~D~V~Cf~C~~~l~~We~~DdP~~eH~r~~P~C~Fv~~~ 91 (94)
T 2poi_A 14 KEEEFVEEFNRLKTFANFPSGSPVSASTLARAGFLYTGEGDTVRCFSCHAAVDRWQYGDSAVGRHRKVSPNCRFINGF 91 (94)
T ss_dssp ---CTTSHHHHHGGGTTCCTTSSSCHHHHHHTTEEECSSTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCTTTTTT
T ss_pred cchhhhCHHHHHHHHhcCCCCccCCHHHHHHcCCCCcCCCCEEEcccCCCEeCCCCCCCCHHHHHHHHCccCcccccc
Confidence 356799999999999999988778999999999999999999999999999999999999999999999999999764
No 12
>1i4o_C X-linked IAP, baculoviral IAP repeat-containing protein 4; protease-inhibitor, apoptosis-hydrolase complex; 2.40A {Homo sapiens} PDB: 1kmc_C 1i51_E 1i3o_E 1c9q_A
Probab=99.94 E-value=7.8e-28 Score=204.02 Aligned_cols=79 Identities=46% Similarity=0.918 Sum_probs=75.4
Q ss_pred CCCCCCCCCCHHHHHhccccCCCCCCCChHHHHHcCCcccCCCCceEEeeeCCcccCCCCCCChHHHHHhhcCCCchhh
Q psy3967 165 SPPAFPNYATYESRLRSFDSWPISLRLKPVTLTEAGFFYTGKADQTLCFRCGGGLKHWEETDDPWTEHARWFSSCPYVK 243 (324)
Q Consensus 165 ~~p~~~~y~~~~~Rl~SF~~Wp~~~~~~~~~LA~AGFyytg~~D~v~Cf~Cg~~l~~W~~~DdP~~eH~~~~p~C~f~~ 243 (324)
..|.++.|.++++||+||.+||+...+++++||+|||||+|.+|.|+||+|+++|.+|+++||||+||++|+|+|.|++
T Consensus 34 ~~p~~~~m~~e~~Rl~TF~~WP~~~~~~p~~LA~AGFyY~g~~D~V~Cf~C~~~L~~We~~DdP~~EH~r~~P~C~Fv~ 112 (141)
T 1i4o_C 34 IYPRNPAMYSEEARLKSFQNWPDYAHLTPRELASAGLYYTGIGDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPNCFFVL 112 (141)
T ss_pred cCCCChhhhCHHHHHHHHhcCCCCccCCHHHHHHcCCcCcCCCCEEEeccCCCEecCCCCCCCHHHHHHHHCcCCcccC
Confidence 4577889999999999999999887789999999999999999999999999999999999999999999999999996
No 13
>3m1d_A Baculoviral IAP repeat-containing protein 2; BIR, apoptosis, cytoplasm, polymorphism, zinc, zinc-FIN metal binding protein; 2.00A {Homo sapiens} PDB: 3m0a_D 3m0d_D
Probab=99.94 E-value=4.8e-28 Score=189.21 Aligned_cols=77 Identities=27% Similarity=0.691 Sum_probs=72.5
Q ss_pred CCCCCHHHHHhccccCCCCCCCChHHHHHcCCcccCCCCceEEeeeCCcccCCCCCCChHHHHHhhcCCCchhhhcc
Q psy3967 170 PNYATYESRLRSFDSWPISLRLKPVTLTEAGFFYTGKADQTLCFRCGGGLKHWEETDDPWTEHARWFSSCPYVKLVK 246 (324)
Q Consensus 170 ~~y~~~~~Rl~SF~~Wp~~~~~~~~~LA~AGFyytg~~D~v~Cf~Cg~~l~~W~~~DdP~~eH~~~~p~C~f~~~~k 246 (324)
.+|.+++.|++||.+||+...+++++||+|||||+|.+|.|+||+|+++|.+|+++||||+||++|+|+|.|++.++
T Consensus 7 ~~~~~e~~Rl~TF~~WP~~~~~~~~~LA~AGFyy~g~~D~v~Cf~C~~~l~~We~~DdP~~eH~~~~p~C~F~~~~~ 83 (85)
T 3m1d_A 7 YDFSCELYRMSTYSTFPAGVPVSERSLARAGFYYTGVNDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCSFIQNLV 83 (85)
T ss_dssp CCHHHHHHHHHGGGGCCTTCSSCHHHHHHTTEEECSSTTCEEETTTCCEECSCCTTCCHHHHHHHHCTTCHHHHHHH
T ss_pred HHhHhHHHHHHHHhcCCCCCcCCHHHHHHCCCeEeCCCCEEEeCCcCCEecCCCCCCCHHHHHHHHCccCcchhccC
Confidence 35789999999999999987789999999999999999999999999999999999999999999999999997653
No 14
>2qra_D XIAP, baculoviral IAP repeat-containing protein 4, inhibitor; apoptosis, signaling protein, zinc binding; 2.50A {Homo sapiens}
Probab=99.94 E-value=1.3e-27 Score=194.91 Aligned_cols=78 Identities=26% Similarity=0.584 Sum_probs=72.1
Q ss_pred CCCCCCCHHHHHhccccCCCCCCCChHHHHHcCCcccCCCCceEEeeeCCcccCCCCCCChHHHHHhhcCCCchhhhc
Q psy3967 168 AFPNYATYESRLRSFDSWPISLRLKPVTLTEAGFFYTGKADQTLCFRCGGGLKHWEETDDPWTEHARWFSSCPYVKLV 245 (324)
Q Consensus 168 ~~~~y~~~~~Rl~SF~~Wp~~~~~~~~~LA~AGFyytg~~D~v~Cf~Cg~~l~~W~~~DdP~~eH~~~~p~C~f~~~~ 245 (324)
..++|.++++|++||.+||....+++++||+|||||+|.+|.|+||+|+++|.+|+++||||+||++|+|+|+|++.+
T Consensus 31 ~~~~m~~e~~RL~TF~~WP~~~~~~p~~LA~AGFyYtg~~D~V~Cf~C~~~L~~We~~DdP~~eH~r~sP~C~Fv~~~ 108 (111)
T 2qra_D 31 KEEEFVEEFNRLKTFANFPSGSPVSASTLARAGFLYTGEGDTVRCFSCHAAVDRWQYGDSAVGRHRKVSPNCRFINGF 108 (111)
T ss_dssp ---CTTSHHHHHHTTTTCCTTCSSCHHHHHHTTEEECSSTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCTTTTTT
T ss_pred hchhhhCHHHHHHHHhcCCCCccCCHHHHHHcCCCCcCCCCEEEcccCCCEeCCCCCCCCHHHHHHHHCccCcchhhc
Confidence 356799999999999999988778999999999999999999999999999999999999999999999999999764
No 15
>2qfa_A Baculoviral IAP repeat-containing protein 5; three-helical-bundle, long helix, protein complex, alternative splicing, apoptosis, cell cycle, cell division; HET: MES; 1.40A {Homo sapiens} SCOP: g.52.1.1 PDB: 1e31_A* 4a0i_A 4a0j_A* 4a0n_A* 2raw_A 3uec_A* 3ued_A* 3uef_A 3uig_A* 3uih_A 3uii_A 1f3h_A 3uee_A 3ueg_A* 3uei_A 3ueh_A* 3uik_A 3uij_A 1m4m_A 2rax_A ...
Probab=99.94 E-value=4.2e-27 Score=200.48 Aligned_cols=85 Identities=31% Similarity=0.564 Sum_probs=79.2
Q ss_pred CCCCCCCCCCHHHHHhccccCCCCC--CCChHHHHHcCCcccCCC---CceEEeeeCCcccCCCCCCChHHHHHhhcCCC
Q psy3967 165 SPPAFPNYATYESRLRSFDSWPISL--RLKPVTLTEAGFFYTGKA---DQTLCFRCGGGLKHWEETDDPWTEHARWFSSC 239 (324)
Q Consensus 165 ~~p~~~~y~~~~~Rl~SF~~Wp~~~--~~~~~~LA~AGFyytg~~---D~v~Cf~Cg~~l~~W~~~DdP~~eH~~~~p~C 239 (324)
..|.++.|.++++|++||.+||+.. .+++++||+|||||+|.+ |.|+||+|+++|.+|+++||||+||++|+|+|
T Consensus 5 ~~p~~~~~~~~~~Rl~TF~~WP~~~~~~~~p~~LA~AGFyy~g~~~~~D~V~Cf~C~~~L~~We~~DdP~~EH~r~~p~C 84 (142)
T 2qfa_A 5 TLPPAWQPFLKDHRISTFKNWPFLEGCACTPERMAEAGFIHCPTENEPDLAQCFFCFKELEGWEPDDDPIEEHKKHSSGC 84 (142)
T ss_dssp CCCTTTGGGSHHHHHHTCCSCSCCSSCSSCHHHHHHTTEEECCBTTBTTCEEETTTCCEECCCCTTCCHHHHHHHHCTTC
T ss_pred CCCCcccccCHHHHHHHHhcCCccCCcCCCHHHHHHcCCCcCCCCCCCCEEEcCCCCCEecccCCCCCHHHHHHHHCcCC
Confidence 4578889999999999999999875 368999999999999986 99999999999999999999999999999999
Q ss_pred chhhhccchh
Q psy3967 240 PYVKLVKGQE 249 (324)
Q Consensus 240 ~f~~~~kg~~ 249 (324)
.|++..||.+
T Consensus 85 ~F~~~~k~~~ 94 (142)
T 2qfa_A 85 AFLSVKKQFE 94 (142)
T ss_dssp GGGGCCSCGG
T ss_pred cceecccccc
Confidence 9999999963
No 16
>1se0_A Apoptosis 1 inhibitor; apoptosis, IAP, BIR, caspase; 1.75A {Drosophila melanogaster} SCOP: g.52.1.1 PDB: 1sdz_A 3sip_E
Probab=99.93 E-value=7.4e-27 Score=192.23 Aligned_cols=79 Identities=32% Similarity=0.788 Sum_probs=72.6
Q ss_pred CCCCCCCHHHHHhccccCCCCCCCChHHHHHcCCcccCCCCceEEeeeCCcccCCCCCCChHHHHHhhcCCCchhhhccc
Q psy3967 168 AFPNYATYESRLRSFDSWPISLRLKPVTLTEAGFFYTGKADQTLCFRCGGGLKHWEETDDPWTEHARWFSSCPYVKLVKG 247 (324)
Q Consensus 168 ~~~~y~~~~~Rl~SF~~Wp~~~~~~~~~LA~AGFyytg~~D~v~Cf~Cg~~l~~W~~~DdP~~eH~~~~p~C~f~~~~kg 247 (324)
.+++|.++++|++||.+||+. .+++++||+|||||+|.+|+|+||+|+++|.+|+++||||+||++|+|+|.|++..+.
T Consensus 8 ~~~~~~~e~~Rl~TF~~WP~~-~~~~~~LA~AGFyy~g~~D~V~Cf~C~~~L~~We~~DdP~~eH~r~~p~C~Fv~~~~~ 86 (116)
T 1se0_A 8 RMNDLNREETRLKTFTDWPLD-WLDKRQLAQTGMYFTHAGDKVKCFFCGVEIGSWEQEDQPVPEHQRWSPNCPLLRRRTT 86 (116)
T ss_dssp --CCTTBHHHHHTTCTTCCCT-TSCHHHHHHTTEEECSSTTCEEETTTCCEEESCCTTCCHHHHHHHHCTTCTTTTTCCC
T ss_pred hhhhhcCHHHHHHHHhhCCCC-cCCHHHHHHcCCcCcCCCCEEEecCcCCEecCCCCCCCHHHHHHHHCccCcceeeecc
Confidence 356789999999999999985 4789999999999999999999999999999999999999999999999999987654
No 17
>2qfa_A Baculoviral IAP repeat-containing protein 5; three-helical-bundle, long helix, protein complex, alternative splicing, apoptosis, cell cycle, cell division; HET: MES; 1.40A {Homo sapiens} SCOP: g.52.1.1 PDB: 1e31_A* 4a0i_A 4a0j_A* 4a0n_A* 2raw_A 3uec_A* 3ued_A* 3uef_A 3uig_A* 3uih_A 3uii_A 1f3h_A 3uee_A 3ueg_A* 3uei_A 3ueh_A* 3uik_A 3uij_A 1m4m_A 2rax_A ...
Probab=99.93 E-value=6.4e-28 Score=205.55 Aligned_cols=130 Identities=26% Similarity=0.449 Sum_probs=95.3
Q ss_pred cccCCcCHHHHHhccCCCCCCCC---cCHHHHHHcCceecCCCCCCCCCCeEeecccCceeccccCCCChhhhhcccCCC
Q psy3967 32 RKQNMTLECDRLDSFKNSWPLTY---LSAKQMAAAGFYFLGKKENGRFSDDVKCIFCGIELGKWVQGDDPLKDHEKWSPN 108 (324)
Q Consensus 32 ~~~~~~~e~~RL~SF~~~Wp~~~---~~~~~LA~aGFyy~g~~~~~~~~D~V~C~~C~~~l~~w~~~Ddp~~eH~~~sP~ 108 (324)
....|.++++||+||.+ ||+.. .++++||+|||||+|...+ .|.|+||+|++.|.+|+++|||+.+|++|+|+
T Consensus 8 ~~~~~~~~~~Rl~TF~~-WP~~~~~~~~p~~LA~AGFyy~g~~~~---~D~V~Cf~C~~~L~~We~~DdP~~EH~r~~p~ 83 (142)
T 2qfa_A 8 PAWQPFLKDHRISTFKN-WPFLEGCACTPERMAEAGFIHCPTENE---PDLAQCFFCFKELEGWEPDDDPIEEHKKHSSG 83 (142)
T ss_dssp TTTGGGSHHHHHHTCCS-CSCCSSCSSCHHHHHHTTEEECCBTTB---TTCEEETTTCCEECCCCTTCCHHHHHHHHCTT
T ss_pred CcccccCHHHHHHHHhc-CCccCCcCCCHHHHHHcCCCcCCCCCC---CCEEEcCCCCCEecccCCCCCHHHHHHHHCcC
Confidence 34569999999999999 99875 6899999999999998222 59999999999999999999999999999999
Q ss_pred CccccccccCCccCCCcCCCCCccccCCCCCcccccCCCCCCccchhhhhcccCCCCCCCCCCCCCHHHHHhccccCCCC
Q psy3967 109 CWFLRRLKKGNTESAGYDTCGSLIIEPPKSKSEVSQSCSQPNQVVSSLEKLGIHKNSPPAFPNYATYESRLRSFDSWPIS 188 (324)
Q Consensus 109 C~f~~~~~~~Nv~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~y~~~~~Rl~SF~~Wp~~ 188 (324)
|+|+...+..+... .+..-.+... ...+.++.| .++|++||.+||..
T Consensus 84 C~F~~~~k~~~~~t------------------------------~~~~l~l~~~-~~~~~~~~~--~~~r~~~F~~~p~~ 130 (142)
T 2qfa_A 84 CAFLSVKKQFEELT------------------------------LGEFLKLDRE-RAKNKIAKE--TNNKKKEFEETAKK 130 (142)
T ss_dssp CGGGGCCSCGGGCB------------------------------HHHHHHHHHH-HHHHHHHHH--HHHHHHHHHHHHHH
T ss_pred Ccceecccccchhh------------------------------HHHHhhhhhH-HHHHHHHHH--HHHHHHHHHHHHHH
Confidence 99998642211000 0000000000 001223344 39999999999987
Q ss_pred CCCChHHHHH
Q psy3967 189 LRLKPVTLTE 198 (324)
Q Consensus 189 ~~~~~~~LA~ 198 (324)
.+..+.+||.
T Consensus 131 ~~~~~~~la~ 140 (142)
T 2qfa_A 131 VRRAIEQLAA 140 (142)
T ss_dssp HHHHHHHHHT
T ss_pred HHHhHHHHhc
Confidence 6566777875
No 18
>3siq_A Apoptosis 1 inhibitor; DIAP1-BIR1 domain, ligase; 2.40A {Drosophila melanogaster}
Probab=99.93 E-value=2.2e-26 Score=193.10 Aligned_cols=78 Identities=32% Similarity=0.804 Sum_probs=72.9
Q ss_pred CCCCCCHHHHHhccccCCCCCCCChHHHHHcCCcccCCCCceEEeeeCCcccCCCCCCChHHHHHhhcCCCchhhhccc
Q psy3967 169 FPNYATYESRLRSFDSWPISLRLKPVTLTEAGFFYTGKADQTLCFRCGGGLKHWEETDDPWTEHARWFSSCPYVKLVKG 247 (324)
Q Consensus 169 ~~~y~~~~~Rl~SF~~Wp~~~~~~~~~LA~AGFyytg~~D~v~Cf~Cg~~l~~W~~~DdP~~eH~~~~p~C~f~~~~kg 247 (324)
..+|.++++|++||.+||+.. +++++||+|||||+|.+|+|+||+|+++|.+|+++||||+||+||+|+|+|++..+.
T Consensus 31 ~~dy~~e~~RL~TF~~WP~~~-~~p~~LA~AGFYYtG~~D~V~Cf~C~~~L~~We~~DdP~~EH~r~sP~C~Fv~~~~~ 108 (136)
T 3siq_A 31 MNDLNREETRLKTFTDWPLDW-LDKRQLAQTGMYFTHAGDKVKCFFCGVEIGSWEQEDQPVPEHQRWSPNCPLLRRRTT 108 (136)
T ss_dssp CCCTTBHHHHHHTTTTCCCTT-SCHHHHHHTTEEECSSTTCEEETTTCCEEECCCTTCCHHHHHHHHCTTCTTTTTCCC
T ss_pred HHhhhCHHHHHHHHccCCCCc-CCHHHHHHCCCeEcCCCCeEEEeccCCEecCCCCCCCHHHHHHHHCcCCcceecccC
Confidence 456999999999999999874 789999999999999999999999999999999999999999999999999987654
No 19
>2poi_A Baculoviral IAP repeat-containing protein 4; zinc finger, signaling protein/apoptosis complex; 1.80A {Homo sapiens} PDB: 2pop_B
Probab=99.93 E-value=4.6e-26 Score=181.07 Aligned_cols=76 Identities=36% Similarity=0.764 Sum_probs=70.2
Q ss_pred cccCCcCHHHHHhccCCCCCCCC-cCHHHHHHcCceecCCCCCCCCCCeEeecccCceeccccCCCChhhhhcccCCCCc
Q psy3967 32 RKQNMTLECDRLDSFKNSWPLTY-LSAKQMAAAGFYFLGKKENGRFSDDVKCIFCGIELGKWVQGDDPLKDHEKWSPNCW 110 (324)
Q Consensus 32 ~~~~~~~e~~RL~SF~~~Wp~~~-~~~~~LA~aGFyy~g~~~~~~~~D~V~C~~C~~~l~~w~~~Ddp~~eH~~~sP~C~ 110 (324)
...+|.+|++||+||.+ ||+.. +++++||+|||||+|. +|+|+||+|+++|.+|+++|||+++|++|+|+|+
T Consensus 14 ~~~~~~~e~~Rl~TF~~-WP~~~~~~p~~LA~AGFyytg~------~D~V~Cf~C~~~l~~We~~DdP~~eH~r~~P~C~ 86 (94)
T 2poi_A 14 KEEEFVEEFNRLKTFAN-FPSGSPVSASTLARAGFLYTGE------GDTVRCFSCHAAVDRWQYGDSAVGRHRKVSPNCR 86 (94)
T ss_dssp ---CTTSHHHHHGGGTT-CCTTSSSCHHHHHHTTEEECSS------TTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCT
T ss_pred cchhhhCHHHHHHHHhc-CCCCccCCHHHHHHcCCCCcCC------CCEEEcccCCCEeCCCCCCCCHHHHHHHHCccCc
Confidence 34569999999999999 99875 7999999999999999 9999999999999999999999999999999999
Q ss_pred cccc
Q psy3967 111 FLRR 114 (324)
Q Consensus 111 f~~~ 114 (324)
|++.
T Consensus 87 Fv~~ 90 (94)
T 2poi_A 87 FING 90 (94)
T ss_dssp TTTT
T ss_pred cccc
Confidence 9975
No 20
>3m1d_A Baculoviral IAP repeat-containing protein 2; BIR, apoptosis, cytoplasm, polymorphism, zinc, zinc-FIN metal binding protein; 2.00A {Homo sapiens} PDB: 3m0a_D 3m0d_D
Probab=99.92 E-value=1.9e-26 Score=180.11 Aligned_cols=77 Identities=35% Similarity=0.827 Sum_probs=71.1
Q ss_pred cccCCcCHHHHHhccCCCCCCC-CcCHHHHHHcCceecCCCCCCCCCCeEeecccCceeccccCCCChhhhhcccCCCCc
Q psy3967 32 RKQNMTLECDRLDSFKNSWPLT-YLSAKQMAAAGFYFLGKKENGRFSDDVKCIFCGIELGKWVQGDDPLKDHEKWSPNCW 110 (324)
Q Consensus 32 ~~~~~~~e~~RL~SF~~~Wp~~-~~~~~~LA~aGFyy~g~~~~~~~~D~V~C~~C~~~l~~w~~~Ddp~~eH~~~sP~C~ 110 (324)
...+|.+|+.||+||.+ ||+. .+++++||+|||||+|. +|.|+||+|+++|.+|+++|||+++|++++|+|+
T Consensus 5 ~~~~~~~e~~Rl~TF~~-WP~~~~~~~~~LA~AGFyy~g~------~D~v~Cf~C~~~l~~We~~DdP~~eH~~~~p~C~ 77 (85)
T 3m1d_A 5 SKYDFSCELYRMSTYST-FPAGVPVSERSLARAGFYYTGV------NDKVKCFCCGLMLDNWKLGDSPIQKHKQLYPSCS 77 (85)
T ss_dssp --CCHHHHHHHHHGGGG-CCTTCSSCHHHHHHTTEEECSS------TTCEEETTTCCEECSCCTTCCHHHHHHHHCTTCH
T ss_pred cHHHhHhHHHHHHHHhc-CCCCCcCCHHHHHHCCCeEeCC------CCEEEeCCcCCEecCCCCCCCHHHHHHHHCccCc
Confidence 45569999999999999 9987 48999999999999999 9999999999999999999999999999999999
Q ss_pred ccccc
Q psy3967 111 FLRRL 115 (324)
Q Consensus 111 f~~~~ 115 (324)
|++.+
T Consensus 78 F~~~~ 82 (85)
T 3m1d_A 78 FIQNL 82 (85)
T ss_dssp HHHHH
T ss_pred chhcc
Confidence 98754
No 21
>1i4o_C X-linked IAP, baculoviral IAP repeat-containing protein 4; protease-inhibitor, apoptosis-hydrolase complex; 2.40A {Homo sapiens} PDB: 1kmc_C 1i51_E 1i3o_E 1c9q_A
Probab=99.92 E-value=8.4e-26 Score=191.55 Aligned_cols=86 Identities=36% Similarity=0.715 Sum_probs=80.0
Q ss_pred cccccCCcCHHHHHhccCCCCCCCC-cCHHHHHHcCceecCCCCCCCCCCeEeecccCceeccccCCCChhhhhcccCCC
Q psy3967 30 CSRKQNMTLECDRLDSFKNSWPLTY-LSAKQMAAAGFYFLGKKENGRFSDDVKCIFCGIELGKWVQGDDPLKDHEKWSPN 108 (324)
Q Consensus 30 ~~~~~~~~~e~~RL~SF~~~Wp~~~-~~~~~LA~aGFyy~g~~~~~~~~D~V~C~~C~~~l~~w~~~Ddp~~eH~~~sP~ 108 (324)
+.....|.++++||+||.+ ||+.. +++++||+|||||+|. +|.|+||+|+++|.+|+++|||+.||++|+|+
T Consensus 35 ~p~~~~m~~e~~Rl~TF~~-WP~~~~~~p~~LA~AGFyY~g~------~D~V~Cf~C~~~L~~We~~DdP~~EH~r~~P~ 107 (141)
T 1i4o_C 35 YPRNPAMYSEEARLKSFQN-WPDYAHLTPRELASAGLYYTGI------GDQVQCFCCGGKLKNWEPCDRAWSEHRRHFPN 107 (141)
T ss_pred CCCChhhhCHHHHHHHHhc-CCCCccCCHHHHHHcCCcCcCC------CCEEEeccCCCEecCCCCCCCHHHHHHHHCcC
Confidence 4555679999999999999 99875 7999999999999999 99999999999999999999999999999999
Q ss_pred CccccccccCCccCC
Q psy3967 109 CWFLRRLKKGNTESA 123 (324)
Q Consensus 109 C~f~~~~~~~Nv~~~ 123 (324)
|+|++.... |+|+.
T Consensus 108 C~Fv~~~~~-nvp~~ 121 (141)
T 1i4o_C 108 CFFVLGRNL-NIRSE 121 (141)
T ss_pred CcccCcccc-CCCcc
Confidence 999998888 99873
No 22
>2qra_D XIAP, baculoviral IAP repeat-containing protein 4, inhibitor; apoptosis, signaling protein, zinc binding; 2.50A {Homo sapiens}
Probab=99.92 E-value=1.1e-25 Score=183.38 Aligned_cols=78 Identities=35% Similarity=0.756 Sum_probs=70.6
Q ss_pred ccccCCcCHHHHHhccCCCCCCCC-cCHHHHHHcCceecCCCCCCCCCCeEeecccCceeccccCCCChhhhhcccCCCC
Q psy3967 31 SRKQNMTLECDRLDSFKNSWPLTY-LSAKQMAAAGFYFLGKKENGRFSDDVKCIFCGIELGKWVQGDDPLKDHEKWSPNC 109 (324)
Q Consensus 31 ~~~~~~~~e~~RL~SF~~~Wp~~~-~~~~~LA~aGFyy~g~~~~~~~~D~V~C~~C~~~l~~w~~~Ddp~~eH~~~sP~C 109 (324)
....+|.+|++||+||.+ ||+.. +++++||+|||||+|. +|+|+||+|+++|.+|+++|||+++|++++|+|
T Consensus 30 ~~~~~m~~e~~RL~TF~~-WP~~~~~~p~~LA~AGFyYtg~------~D~V~Cf~C~~~L~~We~~DdP~~eH~r~sP~C 102 (111)
T 2qra_D 30 NKEEEFVEEFNRLKTFAN-FPSGSPVSASTLARAGFLYTGE------GDTVRCFSCHAAVDRWQYGDSAVGRHRKVSPNC 102 (111)
T ss_dssp ----CTTSHHHHHHTTTT-CCTTCSSCHHHHHHTTEEECSS------TTCEEETTTCCEECCCCTTCCHHHHHHHHCTTC
T ss_pred hhchhhhCHHHHHHHHhc-CCCCccCCHHHHHHcCCCCcCC------CCEEEcccCCCEeCCCCCCCCHHHHHHHHCccC
Confidence 345569999999999999 99875 7999999999999999 999999999999999999999999999999999
Q ss_pred cccccc
Q psy3967 110 WFLRRL 115 (324)
Q Consensus 110 ~f~~~~ 115 (324)
+|++..
T Consensus 103 ~Fv~~~ 108 (111)
T 2qra_D 103 RFINGF 108 (111)
T ss_dssp TTTTTT
T ss_pred cchhhc
Confidence 999753
No 23
>2vm5_A Baculoviral IAP repeat-containing protein 1; apoptosis; 1.80A {Homo sapiens}
Probab=99.91 E-value=2e-25 Score=181.13 Aligned_cols=78 Identities=47% Similarity=0.911 Sum_probs=71.3
Q ss_pred ccccCCcCHHHHHhccCCCCCCCC--cCHHHHHHcCceecCCCCCCCCCCeEeecccCceeccccCCCChhhhhcccCCC
Q psy3967 31 SRKQNMTLECDRLDSFKNSWPLTY--LSAKQMAAAGFYFLGKKENGRFSDDVKCIFCGIELGKWVQGDDPLKDHEKWSPN 108 (324)
Q Consensus 31 ~~~~~~~~e~~RL~SF~~~Wp~~~--~~~~~LA~aGFyy~g~~~~~~~~D~V~C~~C~~~l~~w~~~Ddp~~eH~~~sP~ 108 (324)
.....|.++++||+||.+ ||+.. +++++||+|||||+|. +|.|+||+|++.|.+|+++|||+.+|++|+|.
T Consensus 13 ~~~~~~~~~~~Rl~TF~~-WP~~~~~~~p~~LA~AGFyy~g~------~D~V~Cf~C~~~L~~We~~DdP~~eH~r~~p~ 85 (106)
T 2vm5_A 13 GGKMRYQEEEARLASFRN-WPFYVQGISPCVLSEAGFVFTGK------QDTVQCFSCGGCLGNWEEGDDPWKEHAKWFPK 85 (106)
T ss_dssp ---CTTSSHHHHHHGGGG-CCGGGTTSCHHHHHHTTEEECSS------TTCEEETTTCCEEESCCTTCCHHHHHHHHCTT
T ss_pred CCchhhcCHHHHHHHHhc-CCCCcccCCHHHHHHcCCCCcCC------CCEEEccccCCEecCCCCCCCHHHHHHHHCcC
Confidence 345569999999999999 99875 7999999999999999 99999999999999999999999999999999
Q ss_pred Ccccccc
Q psy3967 109 CWFLRRL 115 (324)
Q Consensus 109 C~f~~~~ 115 (324)
|+|++..
T Consensus 86 C~Fv~~~ 92 (106)
T 2vm5_A 86 CEFLRSK 92 (106)
T ss_dssp CHHHHHH
T ss_pred Ccchhhc
Confidence 9999864
No 24
>3hl5_A Baculoviral IAP repeat-containing protein 4; BIR, apoptosis, small molecule drug discovery, structur drug design, ligase, metal-binding; HET: 9JZ; 1.80A {Homo sapiens} PDB: 1nw9_A 2vsl_A
Probab=99.91 E-value=2.9e-25 Score=176.94 Aligned_cols=76 Identities=38% Similarity=0.799 Sum_probs=71.6
Q ss_pred cccCCcCHHHHHhccCCCCCCCCcCHHHHHHcCceecCCCCCCCCCCeEeecccCceeccccCCCChhhhhcccCCCCcc
Q psy3967 32 RKQNMTLECDRLDSFKNSWPLTYLSAKQMAAAGFYFLGKKENGRFSDDVKCIFCGIELGKWVQGDDPLKDHEKWSPNCWF 111 (324)
Q Consensus 32 ~~~~~~~e~~RL~SF~~~Wp~~~~~~~~LA~aGFyy~g~~~~~~~~D~V~C~~C~~~l~~w~~~Ddp~~eH~~~sP~C~f 111 (324)
....|.++++||+||.+ ||+. +++++||+|||||+|. +|.|+||+|++.|.+|+++|||+.+|++|+|+|+|
T Consensus 7 ~~~~m~~~~~Rl~TF~~-Wp~~-~~~~~LA~AGFyy~g~------~D~v~Cf~C~~~l~~We~~DdP~~eH~r~~p~C~f 78 (95)
T 3hl5_A 7 RNPSMADYEARIFTFGT-WIYS-VNKEQLARAGFYALGE------GDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCKY 78 (95)
T ss_dssp SCGGGCSHHHHHHTTTT-CCSS-SCHHHHHHTTEEECSS------TTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCHH
T ss_pred CCccccCHHHHHHHHcC-CCCC-CCHHHHHhCCCeEcCC------CCeEEecCCCCCccCcCCCCCHHHHHHHHCcCCcc
Confidence 34569999999999999 9987 8999999999999998 99999999999999999999999999999999999
Q ss_pred cccc
Q psy3967 112 LRRL 115 (324)
Q Consensus 112 ~~~~ 115 (324)
+...
T Consensus 79 ~~~~ 82 (95)
T 3hl5_A 79 LLEQ 82 (95)
T ss_dssp HHHH
T ss_pred hHhh
Confidence 9854
No 25
>3d9t_A Baculoviral IAP repeat-containing protein 2; zinc finger, apoptosis, cytoplasm, metal-binding, polymorphism, zinc, zinc-finger, alternative splicing, hydrolase, protease; 1.50A {Homo sapiens} SCOP: g.52.1.1 PDB: 3d9u_A 3uw4_A* 2uvl_A
Probab=99.91 E-value=4.5e-25 Score=176.48 Aligned_cols=77 Identities=42% Similarity=0.918 Sum_probs=71.4
Q ss_pred cccCCcCHHHHHhccCCCCCCCC-cCHHHHHHcCceecCCCCCCCCCCeEeecccCceeccccCCCChhhhhcccCCCCc
Q psy3967 32 RKQNMTLECDRLDSFKNSWPLTY-LSAKQMAAAGFYFLGKKENGRFSDDVKCIFCGIELGKWVQGDDPLKDHEKWSPNCW 110 (324)
Q Consensus 32 ~~~~~~~e~~RL~SF~~~Wp~~~-~~~~~LA~aGFyy~g~~~~~~~~D~V~C~~C~~~l~~w~~~Ddp~~eH~~~sP~C~ 110 (324)
....|.++++||+||.+ ||+.. +++++||+|||||+|. +|.|+||+|++.|.+|+++|||+++|++|+|+|+
T Consensus 7 ~~~~m~~~~~Rl~TF~~-Wp~~~~~~~~~LA~AGFyy~g~------~D~v~Cf~C~~~l~~We~~Ddp~~eH~r~~p~C~ 79 (97)
T 3d9t_A 7 SNLSMQTHAARMRTFMY-WPSSVPVQPEQLASAGFYYVGR------NDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCE 79 (97)
T ss_dssp -CGGGCSHHHHHHGGGG-CCTTSSSCHHHHHHTTEEECSS------TTCEEETTTCCEEECCCTTCCHHHHHHHHCTTBH
T ss_pred cchhhhCHHHHHHHHhc-CCCcccCCHHHHHHcCCCCcCC------CCEEEecCcCCEecCCCCCCCHHHHHHHhCccCh
Confidence 34569999999999999 99875 7999999999999999 9999999999999999999999999999999999
Q ss_pred ccccc
Q psy3967 111 FLRRL 115 (324)
Q Consensus 111 f~~~~ 115 (324)
|+...
T Consensus 80 f~~~~ 84 (97)
T 3d9t_A 80 FLIRM 84 (97)
T ss_dssp HHHHH
T ss_pred hhHhh
Confidence 99854
No 26
>2i3h_A Baculoviral IAP repeat-containing protein 7; zinc binding, peptide complex, apoptosis inhibition, peptidomimetic, small molecule, drug design, inhibitor/apoptosis complex; HET: BTB; 1.62A {Homo sapiens} SCOP: g.52.1.1 PDB: 2i3i_A* 3f7h_A* 3f7i_A* 3gt9_A* 3gta_A* 1tw6_A* 3uw5_A* 3f7g_A* 1oxn_A* 1oxq_A* 1oy7_A*
Probab=99.90 E-value=8.1e-25 Score=183.44 Aligned_cols=79 Identities=44% Similarity=0.831 Sum_probs=73.6
Q ss_pred cccccCCcCHHHHHhccCCCCCCC-CcCHHHHHHcCceecCCCCCCCCCCeEeecccCceeccccCCCChhhhhcccCCC
Q psy3967 30 CSRKQNMTLECDRLDSFKNSWPLT-YLSAKQMAAAGFYFLGKKENGRFSDDVKCIFCGIELGKWVQGDDPLKDHEKWSPN 108 (324)
Q Consensus 30 ~~~~~~~~~e~~RL~SF~~~Wp~~-~~~~~~LA~aGFyy~g~~~~~~~~D~V~C~~C~~~l~~w~~~Ddp~~eH~~~sP~ 108 (324)
......|.++++||+||.+ ||.. .+++++||+|||||+|. +|.|+||+|++.|.+|+++|||+.+|++|+|+
T Consensus 39 ~~~~~~m~~e~~RL~SF~~-WP~~~~~~pe~LA~AGFYYtg~------~D~V~Cf~C~~~L~~We~~DDP~~EH~r~~P~ 111 (133)
T 2i3h_A 39 GPAFPGMGSEELRLASFYD-WPLTAEVPPELLAAAGFFHTGH------QDKVRCFFCYGGLQSWKRGDDPWTEHAKWFPG 111 (133)
T ss_dssp CCSCGGGCCHHHHHHTTTT-CSCTTTSCHHHHHHTTEEECSS------TTCEEETTTCCEEECCCTTCCHHHHHHHHCTT
T ss_pred CCCchhhhCHHHHHHHHhc-CCCCcCCCHHHHHHcCCCCcCC------CCEEEecccCCEeCCCCCCCCHHHHHHHHCcC
Confidence 4566779999999999999 9986 47999999999999999 99999999999999999999999999999999
Q ss_pred Ccccccc
Q psy3967 109 CWFLRRL 115 (324)
Q Consensus 109 C~f~~~~ 115 (324)
|+|+...
T Consensus 112 C~Fv~~~ 118 (133)
T 2i3h_A 112 CQFLLRS 118 (133)
T ss_dssp CHHHHHH
T ss_pred Cceehhc
Confidence 9998754
No 27
>1jd5_A DIAP1, apoptosis 1 inhibitor; IAP, caspase activation; 1.90A {Drosophila melanogaster} SCOP: g.52.1.1 PDB: 1jd4_A 1jd6_A 1q4q_A
Probab=99.90 E-value=8.4e-25 Score=181.65 Aligned_cols=78 Identities=32% Similarity=0.789 Sum_probs=72.6
Q ss_pred ccccCCcCHHHHHhccCCCCCCCC-cCHHHHHHcCceecCCCCCCCCCCeEeecccCceeccccCCCChhhhhcccCCCC
Q psy3967 31 SRKQNMTLECDRLDSFKNSWPLTY-LSAKQMAAAGFYFLGKKENGRFSDDVKCIFCGIELGKWVQGDDPLKDHEKWSPNC 109 (324)
Q Consensus 31 ~~~~~~~~e~~RL~SF~~~Wp~~~-~~~~~LA~aGFyy~g~~~~~~~~D~V~C~~C~~~l~~w~~~Ddp~~eH~~~sP~C 109 (324)
.....|.++++||+||.+ ||+.. .++++||+|||||+|. +|.|+||+|++.|.+|+++|||+.+|++|+|+|
T Consensus 18 p~~p~~~~e~~Rl~TF~~-WP~~~~~~p~~LA~AGFyYtg~------~D~V~Cf~C~~~L~~We~~DdP~~EH~r~~P~C 90 (124)
T 1jd5_A 18 PQYPEYAIETARLRTFEA-WPRNLKQKPHQLAEAGFFYTGV------GDRVRCFSCGGGLMDWNDNDEPWEQHALWLSQC 90 (124)
T ss_dssp CSCGGGCSHHHHHHHGGG-CCTTCSSCHHHHHHTTEEECSS------TTCEEETTTCCEEECCCTTCCHHHHHHHHCTTC
T ss_pred CCChhhhCHHHHHHHHhh-CCCCccCCHHHHHHcCCCCcCC------CCEEEecCCCCEecCCCCCCCHHHHHHHHCcCC
Confidence 345579999999999999 99874 7999999999999999 999999999999999999999999999999999
Q ss_pred cccccc
Q psy3967 110 WFLRRL 115 (324)
Q Consensus 110 ~f~~~~ 115 (324)
+|++..
T Consensus 91 ~Fv~~~ 96 (124)
T 1jd5_A 91 RFVKLM 96 (124)
T ss_dssp HHHHHH
T ss_pred ceeecc
Confidence 999864
No 28
>1g73_C Inhibitors of apoptosis-like protein ILP; helix bundle, zinc-binding domain, apoptosis/apoptosis inhibitor complex; 2.00A {Homo sapiens} SCOP: g.52.1.1 PDB: 3cm2_D* 3clx_D* 3cm7_C* 1f9x_A 1g3f_A 1tfq_A* 1tft_A* 3eyl_A* 3g76_A* 2jk7_A* 2opz_A 2opy_A* 1xb0_A 1xb1_A
Probab=99.90 E-value=1e-24 Score=180.65 Aligned_cols=77 Identities=38% Similarity=0.791 Sum_probs=72.4
Q ss_pred ccccCCcCHHHHHhccCCCCCCCCcCHHHHHHcCceecCCCCCCCCCCeEeecccCceeccccCCCChhhhhcccCCCCc
Q psy3967 31 SRKQNMTLECDRLDSFKNSWPLTYLSAKQMAAAGFYFLGKKENGRFSDDVKCIFCGIELGKWVQGDDPLKDHEKWSPNCW 110 (324)
Q Consensus 31 ~~~~~~~~e~~RL~SF~~~Wp~~~~~~~~LA~aGFyy~g~~~~~~~~D~V~C~~C~~~l~~w~~~Ddp~~eH~~~sP~C~ 110 (324)
.....|.++++||+||.+ ||+. +++++||+|||||+|. +|.|+||+|++.|.+|+++|||+.+|++|+|+|+
T Consensus 20 p~~~~m~~~~~Rl~TF~~-Wp~~-~~p~~LA~AGFyy~g~------~D~V~Cf~C~~~L~~We~~DdP~~eH~r~~P~C~ 91 (121)
T 1g73_C 20 PRNPSMADYEARIFTFGT-WIYS-VNKEQLARAGFYALGE------GDKVKCFHCGGGLTDWKPSEDPWEQHAKWYPGCK 91 (121)
T ss_dssp CSCGGGCSHHHHHHTTTT-CCSS-SCHHHHHHTTEEECSS------TTCEEETTTCCEEESCCTTCCHHHHHHHHCTTCH
T ss_pred CCChhhhCHHHHHHHHcc-CCCC-CCHHHHHHcCCCCcCC------CCEEEcCcCCCCcCCCCCCCCHHHHHHHHCcCCc
Confidence 355579999999999999 9998 8999999999999998 9999999999999999999999999999999999
Q ss_pred ccccc
Q psy3967 111 FLRRL 115 (324)
Q Consensus 111 f~~~~ 115 (324)
|+...
T Consensus 92 Fv~~~ 96 (121)
T 1g73_C 92 YLLEQ 96 (121)
T ss_dssp HHHHH
T ss_pred chhhc
Confidence 99854
No 29
>3mup_A Baculoviral IAP repeat-containing protein 2; zinc-finger motif, apoptosis inhibitor; HET: SMK; 2.60A {Homo sapiens} SCOP: g.52.1.1 PDB: 3oz1_A* 4eb9_A*
Probab=99.90 E-value=1.7e-24 Score=179.53 Aligned_cols=77 Identities=42% Similarity=0.918 Sum_probs=72.3
Q ss_pred cccCCcCHHHHHhccCCCCCCCC-cCHHHHHHcCceecCCCCCCCCCCeEeecccCceeccccCCCChhhhhcccCCCCc
Q psy3967 32 RKQNMTLECDRLDSFKNSWPLTY-LSAKQMAAAGFYFLGKKENGRFSDDVKCIFCGIELGKWVQGDDPLKDHEKWSPNCW 110 (324)
Q Consensus 32 ~~~~~~~e~~RL~SF~~~Wp~~~-~~~~~LA~aGFyy~g~~~~~~~~D~V~C~~C~~~l~~w~~~Ddp~~eH~~~sP~C~ 110 (324)
....|.++++||+||.+ ||+.. +++++||+|||||+|. +|+|+||+|++.|.+|+++|||+.+|++|+|+|+
T Consensus 13 ~~~~m~s~~~Rl~TF~~-WP~~~~~~p~~LA~AGFyy~g~------~D~V~Cf~C~~~L~~We~~DdP~~EH~r~~P~C~ 85 (122)
T 3mup_A 13 SNLSMQTHAARMRTFMY-WPSSVPVQPEQLASAGFYYVGR------NDDVKCFCCDGGLRCWESGDDPWVEHAKWFPRCE 85 (122)
T ss_dssp SCGGGCSHHHHHHGGGG-CCTTCSSCHHHHHHTTEEECSS------TTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCH
T ss_pred CCccccCHHHHHHHHhc-CCCcccCCHHHHHHCCCeEeCC------CCeEEecCcCCEecCCCCCCCHHHHHHHHCcCCc
Confidence 45569999999999999 99874 7999999999999999 9999999999999999999999999999999999
Q ss_pred ccccc
Q psy3967 111 FLRRL 115 (324)
Q Consensus 111 f~~~~ 115 (324)
|+...
T Consensus 86 Fv~~~ 90 (122)
T 3mup_A 86 FLIRM 90 (122)
T ss_dssp HHHHH
T ss_pred chhhc
Confidence 99854
No 30
>3t6p_A Baculoviral IAP repeat-containing protein 2; ring, BIR, CARD, UBA, apoptosis, ubiquitin ligase, SMAC/ ubiquitin, caspase, IAP family, SMAC mimetic; 1.90A {Homo sapiens} PDB: 1qbh_A 2l9m_A 3eb5_A 3eb6_A 4auq_B
Probab=99.82 E-value=3.8e-21 Score=185.48 Aligned_cols=266 Identities=25% Similarity=0.455 Sum_probs=150.1
Q ss_pred CCcCHHHHHhccCCCCCCCC-cCHHHHHHcCceecCCCCCCCCCCeEeecccCceeccccCCCChhhhhcccCCCCcccc
Q psy3967 35 NMTLECDRLDSFKNSWPLTY-LSAKQMAAAGFYFLGKKENGRFSDDVKCIFCGIELGKWVQGDDPLKDHEKWSPNCWFLR 113 (324)
Q Consensus 35 ~~~~e~~RL~SF~~~Wp~~~-~~~~~LA~aGFyy~g~~~~~~~~D~V~C~~C~~~l~~w~~~Ddp~~eH~~~sP~C~f~~ 113 (324)
.|.++++||+||.+ ||+.. +++++||+|||||+|. +|.|+||+|++.|.+|+++||||.+|++|+|+|+|+.
T Consensus 2 ~m~~~~~Rl~tF~~-WP~~~~~~~~~lA~AGFyy~g~------~D~v~Cf~C~~~l~~We~~DdP~~eH~~~~p~C~f~~ 74 (345)
T 3t6p_A 2 SMQTHAARMRTFMY-WPSSVPVQPEQLASAGFYYVGR------NDDVKCFSCDGGLRCWESGDDPWVEHAKWFPRCEFLI 74 (345)
T ss_dssp TTSSHHHHHHHGGG-SCTTCSSCHHHHHHTTEEECSS------TTCEEETTTCCEECCCCTTCCHHHHHHHHCTTCHHHH
T ss_pred CCccHHHHHHHHhh-CCCcccCCHHHHHhCCCeecCC------CCeEEecCCCCCccCCCCCCCHHHHHHHhCCCCccHH
Confidence 58999999999999 99875 7999999999999999 9999999999999999999999999999999999987
Q ss_pred ccccCC----ccCCCcCCCCCc-ccc---CCCCCcccccCCCCC---Cccc-hhhhhccc-------------CCCCCCC
Q psy3967 114 RLKKGN----TESAGYDTCGSL-IIE---PPKSKSEVSQSCSQP---NQVV-SSLEKLGI-------------HKNSPPA 168 (324)
Q Consensus 114 ~~~~~N----v~~~~~d~~~~~-~~~---~~~~~~~~~~~~~~~---~~~~-~~~~~~~~-------------~~~~~p~ 168 (324)
..+... +-. .+..-... +.. ..+..... ..... .++. ...-..|. .. ...
T Consensus 75 ~~kg~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~l~mGf~~~~v~~~~~~~~~~-~g~- 149 (345)
T 3t6p_A 75 RMKGQEFVDEIQG-RYPHLLEQLLSTPPIIHYGPGES--SSEDAVMMNTPVVKSALEMGFNRDLVKQTVQSKILT-TGE- 149 (345)
T ss_dssp HHHCHHHHHHHHH-HSTTHHHHHHHC---------------CCCGGGCSHHHHHHHHTTCCHHHHHHHHHHHHHH-HSS-
T ss_pred HhccHHHHHHHHH-hCcccccccccCccccccCCccc--hhhhhhhhcCHHHHHHHHhcccHHHHHHHHHHHHHh-cCC-
Confidence 542110 000 00000000 000 00000000 00000 0000 00000000 00 000
Q ss_pred CCCCCCHHHHHh----------------ccccCCCCCCCChHHHHHcCCcccCCCCceEEeeeCCcccCCCCCCChHHHH
Q psy3967 169 FPNYATYESRLR----------------SFDSWPISLRLKPVTLTEAGFFYTGKADQTLCFRCGGGLKHWEETDDPWTEH 232 (324)
Q Consensus 169 ~~~y~~~~~Rl~----------------SF~~Wp~~~~~~~~~LA~AGFyytg~~D~v~Cf~Cg~~l~~W~~~DdP~~eH 232 (324)
.|.+.+.=+. .+..+- ...++..++++|+||.. +.|...+.+|...+++|.++
T Consensus 150 --~~~~~~~lv~~~l~~~~~~~~~~~~~~~~~~~-~~~~s~~~~~ra~l~~~--------~~~v~pild~lle~~vis~~ 218 (345)
T 3t6p_A 150 --NYKTVNDIVSALLNAEDEKREEEKEKQAEEMA-SDDLSLIRKNRMALFQQ--------LTCVLPILDNLLKANVINKQ 218 (345)
T ss_dssp --CCCSHHHHHHHHHHHHHHHHHHHHHHHHSCCC-CHHHHHHHHTHHHHHHH--------CCCCHHHHHHHHHTTSSCHH
T ss_pred --CcCCHHHHHHHHHhcccccchhhhhhhhcccc-cccchHHHHHHHHHhhc--------cccccccccccccccccchh
Confidence 1122211111 122221 01124556778888776 45788888999999999999
Q ss_pred HhhcCCCchhhhccchhHHHhhhccccccCCC-----CCcCCc--cccc-cccCCCCCCCCC---CCCCCCCCCCccccc
Q psy3967 233 ARWFSSCPYVKLVKGQEFINQVIGHKEVANDP-----ITLQPL--HYIA-ETSTAVKPTACS---QDDKRPEPNSDGRLC 301 (324)
Q Consensus 233 ~~~~p~C~f~~~~kg~~~i~~v~~~~~~~~~~-----~~~~~~--~~~~-~~~~~~~~t~~~---~~~~~~~~~~~~~~C 301 (324)
.++...+.+.....+.+++..++......... ....+. ..+. .......++... ..++..+.+.++..|
T Consensus 219 e~dv~~~~~~~~~~~r~li~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~C 298 (345)
T 3t6p_A 219 EHDIIKQKTQIPLQARELIDTILVKGNAAANIFKNSLKEIDSTLYKNLFVDKNMKYIPTEDVSGLSLEEQLRRLQEERTC 298 (345)
T ss_dssp HHHHHHTCSSHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHCHHHHHHHHTSCCCCCCCSSCGGGSCHHHHHHHHHTTCBC
T ss_pred hhhhhhhHhhhHHHHHHHHHHHHHhhhhhHHHHHHHHhccchhhhhhhccccccccCCccccccccHHHHHHhCcCCCCC
Confidence 99999998877777777776665421100000 000000 0000 000000000000 001112234456889
Q ss_pred cccccccccEEEecCCceeecc
Q psy3967 302 KICYQREMGVVFLPCGHIVACV 323 (324)
Q Consensus 302 ~iC~~~~~~~~~~PCgH~~~C~ 323 (324)
.||++...+.+++||||.+.|.
T Consensus 299 ~IC~~~~~~~v~lpCgH~~fC~ 320 (345)
T 3t6p_A 299 KVCMDKEVSVVFIPCGHLVVCQ 320 (345)
T ss_dssp TTTSSSBCCEEEETTCCEEECT
T ss_pred CccCCcCCceEEcCCCChhHhH
Confidence 9999999999999999997774
No 31
>2ea5_A Cell growth regulator with ring finger domain protein 1; CGRRF1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.32 E-value=2.2e-07 Score=68.70 Aligned_cols=28 Identities=29% Similarity=0.756 Sum_probs=25.2
Q ss_pred CccccccccccccccEEEecCCceeecc
Q psy3967 296 SDGRLCKICYQREMGVVFLPCGHIVACV 323 (324)
Q Consensus 296 ~~~~~C~iC~~~~~~~~~~PCgH~~~C~ 323 (324)
.+..+|+||+++.++++|+||||++.|.
T Consensus 13 ~~~~~C~IC~~~~~~~v~~pCgH~~~C~ 40 (68)
T 2ea5_A 13 ENSKDCVVCQNGTVNWVLLPCRHTCLCD 40 (68)
T ss_dssp CCSSCCSSSSSSCCCCEETTTTBCCSCT
T ss_pred CCCCCCCCcCcCCCCEEEECCCChhhhH
Confidence 3567899999999999999999998875
No 32
>2vje_A E3 ubiquitin-protein ligase MDM2; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_A* 2hdp_A
Probab=97.86 E-value=4.3e-06 Score=60.81 Aligned_cols=27 Identities=30% Similarity=0.599 Sum_probs=24.1
Q ss_pred ccccccccccccccEEEe--cCCceeecc
Q psy3967 297 DGRLCKICYQREMGVVFL--PCGHIVACV 323 (324)
Q Consensus 297 ~~~~C~iC~~~~~~~~~~--PCgH~~~C~ 323 (324)
++..|+||+++.++++|+ ||||++.|.
T Consensus 7 ~~~~C~IC~~~~~~~~~~~~pCgH~~~C~ 35 (64)
T 2vje_A 7 AIEPCVICQGRPKNGCIVHGKTGHLMACF 35 (64)
T ss_dssp GGSCCTTTSSSCSCEEEEETTEEEEEECH
T ss_pred CcCCCCcCCCCCCCEEEECCCCCChhhHH
Confidence 467899999999999999 999998763
No 33
>2vje_B MDM4 protein; proto-oncogene, phosphorylation, alternative splicing, HOST-virus interaction, UBL conjugation pathway, zinc-finger, polymorphism; HET: FLC; 2.20A {Homo sapiens} PDB: 2vjf_B*
Probab=97.83 E-value=5.4e-06 Score=60.11 Aligned_cols=27 Identities=26% Similarity=0.583 Sum_probs=23.6
Q ss_pred ccccccccccccccEEEe--cCCceeecc
Q psy3967 297 DGRLCKICYQREMGVVFL--PCGHIVACV 323 (324)
Q Consensus 297 ~~~~C~iC~~~~~~~~~~--PCgH~~~C~ 323 (324)
....|+||+++.++.+++ ||||++.|.
T Consensus 6 ~~~~C~IC~~~~~~~~~~~~pCgH~~~C~ 34 (63)
T 2vje_B 6 LLKPCSLCEKRPRDGNIIHGRTGHLVTCF 34 (63)
T ss_dssp GGSBCTTTSSSBSCEEEEETTEEEEEECH
T ss_pred cCCCCcccCCcCCCeEEEecCCCCHhHHH
Confidence 356899999999999888 999998774
No 34
>2yho_A E3 ubiquitin-protein ligase mylip; ligase, E2 ligase-E3 ligase complex, ring zinc-finger, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 2yhn_A
Probab=97.79 E-value=5.5e-06 Score=62.85 Aligned_cols=29 Identities=38% Similarity=0.970 Sum_probs=25.1
Q ss_pred CCccccccccccccccEEEecCCceeecc
Q psy3967 295 NSDGRLCKICYQREMGVVFLPCGHIVACV 323 (324)
Q Consensus 295 ~~~~~~C~iC~~~~~~~~~~PCgH~~~C~ 323 (324)
+.+...|.||+++.++++|+||||++.|.
T Consensus 15 l~~~~~C~IC~~~~~~~v~~pCgH~~~C~ 43 (79)
T 2yho_A 15 LKEAMLCMVCCEEEINSTFCPCGHTVCCE 43 (79)
T ss_dssp HHHHTBCTTTSSSBCCEEEETTCBCCBCH
T ss_pred CCCCCEeEEeCcccCcEEEECCCCHHHHH
Confidence 44567899999999999999999997663
No 35
>4ic3_A E3 ubiquitin-protein ligase XIAP; ring domain, zinc-finger, E3 ligase; 1.78A {Homo sapiens} PDB: 4ic2_A
Probab=97.51 E-value=2.6e-05 Score=58.10 Aligned_cols=29 Identities=48% Similarity=1.250 Sum_probs=25.0
Q ss_pred CCccccccccccccccEEEecCCceeecc
Q psy3967 295 NSDGRLCKICYQREMGVVFLPCGHIVACV 323 (324)
Q Consensus 295 ~~~~~~C~iC~~~~~~~~~~PCgH~~~C~ 323 (324)
..+...|.||++..++.+++||||.+.|.
T Consensus 21 ~~~~~~C~iC~~~~~~~~~~pCgH~~~C~ 49 (74)
T 4ic3_A 21 LQEEKLCKICMDRNIAIVFVPCGHLVTCK 49 (74)
T ss_dssp HHHHTBCTTTSSSBCCEEEETTCCBCCCH
T ss_pred CccCCCCCCCCCCCCCEEEcCCCChhHHH
Confidence 44567899999999999999999996663
No 36
>2ecg_A Baculoviral IAP repeat-containing protein 4; BIRC4, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=97.32 E-value=2.2e-05 Score=58.54 Aligned_cols=29 Identities=48% Similarity=1.250 Sum_probs=24.8
Q ss_pred CCccccccccccccccEEEecCCceeecc
Q psy3967 295 NSDGRLCKICYQREMGVVFLPCGHIVACV 323 (324)
Q Consensus 295 ~~~~~~C~iC~~~~~~~~~~PCgH~~~C~ 323 (324)
+.+..+|.||++..++.+++||||.+.|.
T Consensus 22 ~~~~~~C~IC~~~~~~~~~~pCgH~~~C~ 50 (75)
T 2ecg_A 22 LQEEKLCKICMDRNIAIVFVPCGHLVTCK 50 (75)
T ss_dssp HHHHHSCSSSCSSCCCBCCSSSCCCCBCH
T ss_pred CCCCCCCCcCCCCCCCEEEecCCCHHHHH
Confidence 34567899999999999999999996653
No 37
>2d8t_A Dactylidin, ring finger protein 146; RNF146, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=96.01 E-value=0.0062 Score=44.22 Aligned_cols=26 Identities=35% Similarity=0.612 Sum_probs=22.7
Q ss_pred CccccccccccccccEEEecCCceee
Q psy3967 296 SDGRLCKICYQREMGVVFLPCGHIVA 321 (324)
Q Consensus 296 ~~~~~C~iC~~~~~~~~~~PCgH~~~ 321 (324)
.+...|.||++.-.+.+++||||+.+
T Consensus 13 ~~~~~C~IC~~~~~~~~~~~CgH~fC 38 (71)
T 2d8t_A 13 LTVPECAICLQTCVHPVSLPCKHVFC 38 (71)
T ss_dssp SSCCBCSSSSSBCSSEEEETTTEEEE
T ss_pred CCCCCCccCCcccCCCEEccCCCHHH
Confidence 34678999999999999999999854
No 38
>2ysl_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.99 E-value=0.0058 Score=44.29 Aligned_cols=28 Identities=25% Similarity=0.509 Sum_probs=24.3
Q ss_pred CCCccccccccccccccEEEecCCceee
Q psy3967 294 PNSDGRLCKICYQREMGVVFLPCGHIVA 321 (324)
Q Consensus 294 ~~~~~~~C~iC~~~~~~~~~~PCgH~~~ 321 (324)
...+...|.||++.-.+.+++||||..+
T Consensus 16 ~~~~~~~C~IC~~~~~~~~~~~CgH~fC 43 (73)
T 2ysl_A 16 KLQEEVICPICLDILQKPVTIDCGHNFC 43 (73)
T ss_dssp CCCCCCBCTTTCSBCSSEEECTTCCEEE
T ss_pred hCccCCEeccCCcccCCeEEcCCCChhh
Confidence 4556789999999999999999999854
No 39
>2ysj_A Tripartite motif-containing protein 31; ring-type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.94 E-value=0.0051 Score=43.48 Aligned_cols=28 Identities=25% Similarity=0.509 Sum_probs=24.3
Q ss_pred CCCccccccccccccccEEEecCCceee
Q psy3967 294 PNSDGRLCKICYQREMGVVFLPCGHIVA 321 (324)
Q Consensus 294 ~~~~~~~C~iC~~~~~~~~~~PCgH~~~ 321 (324)
...+...|.||++.-.+.+.+||||..+
T Consensus 16 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC 43 (63)
T 2ysj_A 16 KLQEEVICPICLDILQKPVTIDCGHNFC 43 (63)
T ss_dssp CCCCCCBCTTTCSBCSSCEECTTSSEEC
T ss_pred hCccCCCCCcCCchhCCeEEeCCCCcch
Confidence 4556789999999999999999999854
No 40
>2ecn_A Ring finger protein 141; RNF141, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.85 E-value=0.0063 Score=43.85 Aligned_cols=26 Identities=31% Similarity=0.704 Sum_probs=22.1
Q ss_pred CCccccccccccccccEEEecCCceee
Q psy3967 295 NSDGRLCKICYQREMGVVFLPCGHIVA 321 (324)
Q Consensus 295 ~~~~~~C~iC~~~~~~~~~~PCgH~~~ 321 (324)
..+...|.||++...+ +++||||..+
T Consensus 12 ~~~~~~C~IC~~~~~~-~~~~CgH~fc 37 (70)
T 2ecn_A 12 LTDEEECCICMDGRAD-LILPCAHSFC 37 (70)
T ss_dssp CCCCCCCSSSCCSCCS-EEETTTEEEC
T ss_pred CCCCCCCeeCCcCccC-cccCCCCccc
Confidence 4456789999999999 9999999853
No 41
>2ct2_A Tripartite motif protein 32; zinc-finger protein HT2A, TAT- interacting protein, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.51 E-value=0.013 Score=43.80 Aligned_cols=28 Identities=25% Similarity=0.505 Sum_probs=23.6
Q ss_pred CCCcccccccccccccc----EEEecCCceee
Q psy3967 294 PNSDGRLCKICYQREMG----VVFLPCGHIVA 321 (324)
Q Consensus 294 ~~~~~~~C~iC~~~~~~----~~~~PCgH~~~ 321 (324)
...+...|.||++.-.+ .+.+||||..+
T Consensus 11 ~~~~~~~C~IC~~~~~~~~~~~~~~~CgH~fC 42 (88)
T 2ct2_A 11 ALREVLECPICMESFTEEQLRPKLLHCGHTIC 42 (88)
T ss_dssp CCCSCCBCTTTCCBCCTTSSCEEECSSSCEEE
T ss_pred hccCCCCCccCCccccccCCCeEECCCCChhh
Confidence 34567889999999888 99999999865
No 42
>2csy_A Zinc finger protein 183-like 1; ring finger protein 161, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.42 E-value=0.013 Score=43.54 Aligned_cols=26 Identities=27% Similarity=0.323 Sum_probs=22.8
Q ss_pred CccccccccccccccEEEecCCceee
Q psy3967 296 SDGRLCKICYQREMGVVFLPCGHIVA 321 (324)
Q Consensus 296 ~~~~~C~iC~~~~~~~~~~PCgH~~~ 321 (324)
.+...|.||++.-.+.+++||||..+
T Consensus 13 ~~~~~C~IC~~~~~~p~~~~CgH~fC 38 (81)
T 2csy_A 13 EIPFRCFICRQAFQNPVVTKCRHYFC 38 (81)
T ss_dssp CCCSBCSSSCSBCCSEEECTTSCEEE
T ss_pred CCCCCCcCCCchhcCeeEccCCCHhH
Confidence 44678999999999999999999864
No 43
>2ecj_A Tripartite motif-containing protein 39; TRIM39, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.32 E-value=0.0059 Score=42.11 Aligned_cols=28 Identities=21% Similarity=0.451 Sum_probs=23.6
Q ss_pred CCCccccccccccccccEEEecCCceee
Q psy3967 294 PNSDGRLCKICYQREMGVVFLPCGHIVA 321 (324)
Q Consensus 294 ~~~~~~~C~iC~~~~~~~~~~PCgH~~~ 321 (324)
...+...|.||++.-.+.+.+||||..+
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC 38 (58)
T 2ecj_A 11 NLQVEASCSVCLEYLKEPVIIECGHNFC 38 (58)
T ss_dssp CSCCCCBCSSSCCBCSSCCCCSSCCCCC
T ss_pred ccccCCCCccCCcccCccEeCCCCCccC
Confidence 3456778999999999999999999853
No 44
>2ea6_A Ring finger protein 4; RNF4, RES4-26, ring domain, zinc- binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=95.00 E-value=0.013 Score=41.72 Aligned_cols=27 Identities=30% Similarity=0.582 Sum_probs=21.6
Q ss_pred CCccccccccccccccE-------EEecCCceee
Q psy3967 295 NSDGRLCKICYQREMGV-------VFLPCGHIVA 321 (324)
Q Consensus 295 ~~~~~~C~iC~~~~~~~-------~~~PCgH~~~ 321 (324)
..+...|.||++.-.+. +++||||..+
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc 45 (69)
T 2ea6_A 12 PSGTVSCPICMDGYSEIVQNGRLIVSTECGHVFC 45 (69)
T ss_dssp TTCCCCCTTTCCCHHHHTTTTCCEEECSSSCEEE
T ss_pred CCCCCCCcccCccccccccccCCeEeCCCCChhc
Confidence 44577899999987664 9999999754
No 45
>2yur_A Retinoblastoma-binding protein 6; P53-associated cellular protein of testis, proliferation potential-related protein, protein P2P-R; NMR {Homo sapiens}
Probab=94.82 E-value=0.02 Score=41.95 Aligned_cols=28 Identities=36% Similarity=0.721 Sum_probs=24.4
Q ss_pred CCCccccccccccccccEEEec-CCceee
Q psy3967 294 PNSDGRLCKICYQREMGVVFLP-CGHIVA 321 (324)
Q Consensus 294 ~~~~~~~C~iC~~~~~~~~~~P-CgH~~~ 321 (324)
...+...|.||++.-.+-+.+| |||..+
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC 39 (74)
T 2yur_A 11 PIPDELLCLICKDIMTDAVVIPCCGNSYC 39 (74)
T ss_dssp CSCGGGSCSSSCCCCTTCEECSSSCCEEC
T ss_pred cCCCCCCCcCCChHHhCCeEcCCCCCHHH
Confidence 4567889999999999999999 999754
No 46
>2djb_A Polycomb group ring finger protein 6; PCGF6, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.77 E-value=0.02 Score=41.53 Aligned_cols=28 Identities=21% Similarity=0.361 Sum_probs=23.6
Q ss_pred CCCccccccccccccccEEEe-cCCceee
Q psy3967 294 PNSDGRLCKICYQREMGVVFL-PCGHIVA 321 (324)
Q Consensus 294 ~~~~~~~C~iC~~~~~~~~~~-PCgH~~~ 321 (324)
...+...|.||++.-.+.+.+ ||||..+
T Consensus 11 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC 39 (72)
T 2djb_A 11 ELTPYILCSICKGYLIDATTITECLHTFC 39 (72)
T ss_dssp CCCGGGSCTTTSSCCSSCEECSSSCCEEC
T ss_pred hcCCCCCCCCCChHHHCcCEECCCCCHHH
Confidence 456688999999999988887 9999764
No 47
>2ecw_A Tripartite motif-containing protein 30; metal binding protein, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=94.67 E-value=0.018 Score=42.57 Aligned_cols=28 Identities=21% Similarity=0.335 Sum_probs=23.8
Q ss_pred CCCccccccccccccccEEEecCCceee
Q psy3967 294 PNSDGRLCKICYQREMGVVFLPCGHIVA 321 (324)
Q Consensus 294 ~~~~~~~C~iC~~~~~~~~~~PCgH~~~ 321 (324)
...+...|.||++.-.+-+.+||||..+
T Consensus 15 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC 42 (85)
T 2ecw_A 15 MIKEEVTCPICLELLKEPVSADCNHSFC 42 (85)
T ss_dssp CCCTTTSCTTTCSCCSSCEECTTSCCBC
T ss_pred hCccCCCCcCCChhhCcceeCCCCCHHH
Confidence 3456788999999999999999999754
No 48
>2ecv_A Tripartite motif-containing protein 5; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=94.46 E-value=0.014 Score=43.11 Aligned_cols=28 Identities=25% Similarity=0.483 Sum_probs=23.8
Q ss_pred CCCccccccccccccccEEEecCCceee
Q psy3967 294 PNSDGRLCKICYQREMGVVFLPCGHIVA 321 (324)
Q Consensus 294 ~~~~~~~C~iC~~~~~~~~~~PCgH~~~ 321 (324)
...+...|.||++.-.+.+.+||||..+
T Consensus 15 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC 42 (85)
T 2ecv_A 15 NVKEEVTCPICLELLTQPLSLDCGHSFC 42 (85)
T ss_dssp CCCCCCCCTTTCSCCSSCBCCSSSCCBC
T ss_pred HccCCCCCCCCCcccCCceeCCCCCHHH
Confidence 3456788999999999999999999754
No 49
>2egp_A Tripartite motif-containing protein 34; ZF-C3HC4 domain, tripartite motif protein 34, interferon- responsive finger protein 1; NMR {Homo sapiens}
Probab=94.36 E-value=0.011 Score=43.29 Aligned_cols=28 Identities=25% Similarity=0.507 Sum_probs=23.5
Q ss_pred CCCccccccccccccccEEEecCCceee
Q psy3967 294 PNSDGRLCKICYQREMGVVFLPCGHIVA 321 (324)
Q Consensus 294 ~~~~~~~C~iC~~~~~~~~~~PCgH~~~ 321 (324)
...+...|.||++.-.+.+.+||||..+
T Consensus 8 ~~~~~~~C~IC~~~~~~p~~l~CgH~fC 35 (79)
T 2egp_A 8 NVQEEVTCPICLELLTEPLSLDCGHSLC 35 (79)
T ss_dssp CCCCCCEETTTTEECSSCCCCSSSCCCC
T ss_pred hcccCCCCcCCCcccCCeeECCCCCHHH
Confidence 3456788999999999999999999754
No 50
>1bor_A Transcription factor PML; proto-oncogene, nuclear bodies (PODS), leukemia, transcription regulation; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=94.28 E-value=0.0096 Score=41.44 Aligned_cols=25 Identities=24% Similarity=0.453 Sum_probs=21.9
Q ss_pred ccccccccccccccEEEecCCceee
Q psy3967 297 DGRLCKICYQREMGVVFLPCGHIVA 321 (324)
Q Consensus 297 ~~~~C~iC~~~~~~~~~~PCgH~~~ 321 (324)
+...|.||++.-.+-+.+||||..+
T Consensus 5 ~~~~C~IC~~~~~~p~~l~CgH~fC 29 (56)
T 1bor_A 5 QFLRCQQCQAEAKCPKLLPCLHTLC 29 (56)
T ss_dssp CCSSCSSSCSSCBCCSCSTTSCCSB
T ss_pred cCCCceEeCCccCCeEEcCCCCccc
Confidence 4678999999999999999999754
No 51
>2kiz_A E3 ubiquitin-protein ligase arkadia; ring-H2 finger, E3 ligase, Zn binding domain, metal zinc, zinc-finger, metal binding protein; NMR {Homo sapiens}
Probab=94.19 E-value=0.04 Score=39.37 Aligned_cols=26 Identities=31% Similarity=0.591 Sum_probs=20.0
Q ss_pred Cccccccccccc---cccEEEecCCceee
Q psy3967 296 SDGRLCKICYQR---EMGVVFLPCGHIVA 321 (324)
Q Consensus 296 ~~~~~C~iC~~~---~~~~~~~PCgH~~~ 321 (324)
.+...|.||++. ...++.+||||+.+
T Consensus 12 ~~~~~C~IC~~~~~~~~~~~~~~C~H~fc 40 (69)
T 2kiz_A 12 DTEEKCTICLSILEEGEDVRRLPCMHLFH 40 (69)
T ss_dssp TCCCSBTTTTBCCCSSSCEEECTTSCEEE
T ss_pred CCCCCCeeCCccccCCCcEEEeCCCCHHH
Confidence 346789999654 46789999999854
No 52
>2ecm_A Ring finger and CHY zinc finger domain- containing protein 1; RCHY1, ring domain, zinc-binding domain, structural genomics, NPPSFA; NMR {Mus musculus} PDB: 2jrj_A
Probab=94.07 E-value=0.028 Score=38.17 Aligned_cols=24 Identities=33% Similarity=0.780 Sum_probs=19.6
Q ss_pred ccccccccccccc----EEEecCCceee
Q psy3967 298 GRLCKICYQREMG----VVFLPCGHIVA 321 (324)
Q Consensus 298 ~~~C~iC~~~~~~----~~~~PCgH~~~ 321 (324)
...|.||++.-.+ ++++||||+..
T Consensus 5 ~~~C~IC~~~~~~~~~~~~~~~CgH~fc 32 (55)
T 2ecm_A 5 SSGCPICLEDIHTSRVVAHVLPCGHLLH 32 (55)
T ss_dssp CCSCTTTCCCCCTTTSCEEECTTSCEEE
T ss_pred CCcCcccChhhcCCCcCeEecCCCCccc
Confidence 4679999987655 99999999754
No 53
>1chc_A Equine herpes virus-1 ring domain; viral protein; NMR {Equid herpesvirus 1} SCOP: g.44.1.1
Probab=94.05 E-value=0.022 Score=40.58 Aligned_cols=24 Identities=29% Similarity=0.664 Sum_probs=20.6
Q ss_pred ccccccccccccc-EEEecCCceee
Q psy3967 298 GRLCKICYQREMG-VVFLPCGHIVA 321 (324)
Q Consensus 298 ~~~C~iC~~~~~~-~~~~PCgH~~~ 321 (324)
...|.||++.-.+ ++++||||..+
T Consensus 5 ~~~C~IC~~~~~~~~~~~~C~H~fc 29 (68)
T 1chc_A 5 AERCPICLEDPSNYSMALPCLHAFC 29 (68)
T ss_dssp CCCCSSCCSCCCSCEEETTTTEEES
T ss_pred CCCCeeCCccccCCcEecCCCCeeH
Confidence 5679999999888 69999999843
No 54
>4ayc_A E3 ubiquitin-protein ligase RNF8; DNA damage, K63 chains; HET: CPQ; 1.90A {Homo sapiens} PDB: 4epo_C
Probab=94.00 E-value=0.021 Score=47.01 Aligned_cols=25 Identities=28% Similarity=0.527 Sum_probs=22.0
Q ss_pred ccccccccccccccEEEecCCceee
Q psy3967 297 DGRLCKICYQREMGVVFLPCGHIVA 321 (324)
Q Consensus 297 ~~~~C~iC~~~~~~~~~~PCgH~~~ 321 (324)
++..|.||++.-.+.|.+||||..+
T Consensus 52 ~~~~C~iC~~~~~~~~~~~CgH~fc 76 (138)
T 4ayc_A 52 NELQCIICSEYFIEAVTLNCAHSFC 76 (138)
T ss_dssp HHSBCTTTCSBCSSEEEETTSCEEE
T ss_pred ccCCCcccCcccCCceECCCCCCcc
Confidence 4567999999999999999999765
No 55
>2ect_A Ring finger protein 126; metal binding protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=93.67 E-value=0.06 Score=39.37 Aligned_cols=27 Identities=30% Similarity=0.656 Sum_probs=20.1
Q ss_pred CCccccccccccc---cccEEEecCCceee
Q psy3967 295 NSDGRLCKICYQR---EMGVVFLPCGHIVA 321 (324)
Q Consensus 295 ~~~~~~C~iC~~~---~~~~~~~PCgH~~~ 321 (324)
..+...|.||++. ...++.+||||+.+
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~fc 41 (78)
T 2ect_A 12 VGSGLECPVCKEDYALGESVRQLPCNHLFH 41 (78)
T ss_dssp SSSSCCCTTTTSCCCTTSCEEECTTSCEEE
T ss_pred CCCCCCCeeCCccccCCCCEEEeCCCCeec
Confidence 3456789999654 46678899999754
No 56
>2ecy_A TNF receptor-associated factor 3; metal binding protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.62 E-value=0.021 Score=40.68 Aligned_cols=27 Identities=22% Similarity=0.311 Sum_probs=23.1
Q ss_pred CCccccccccccccccEEEecCCceee
Q psy3967 295 NSDGRLCKICYQREMGVVFLPCGHIVA 321 (324)
Q Consensus 295 ~~~~~~C~iC~~~~~~~~~~PCgH~~~ 321 (324)
..+...|.||++.-.+.+.+||||..+
T Consensus 12 ~~~~~~C~IC~~~~~~p~~~~CgH~fC 38 (66)
T 2ecy_A 12 VEDKYKCEKCHLVLCSPKQTECGHRFC 38 (66)
T ss_dssp CCCCEECTTTCCEESSCCCCSSSCCCC
T ss_pred CCcCCCCCCCChHhcCeeECCCCCHHH
Confidence 445788999999999999999999854
No 57
>2ep4_A Ring finger protein 24; zinc binding, ubiquitin, E3 enzyme, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=93.50 E-value=0.073 Score=38.49 Aligned_cols=27 Identities=22% Similarity=0.455 Sum_probs=20.5
Q ss_pred CCcccccccccccc---ccEEEecCCceee
Q psy3967 295 NSDGRLCKICYQRE---MGVVFLPCGHIVA 321 (324)
Q Consensus 295 ~~~~~~C~iC~~~~---~~~~~~PCgH~~~ 321 (324)
..+...|.||++.- ..++.+||||+.+
T Consensus 12 ~~~~~~C~IC~~~~~~~~~~~~~~C~H~f~ 41 (74)
T 2ep4_A 12 LNLHELCAVCLEDFKPRDELGICPCKHAFH 41 (74)
T ss_dssp CCCSCBCSSSCCBCCSSSCEEEETTTEEEE
T ss_pred CCCCCCCcCCCcccCCCCcEEEcCCCCEec
Confidence 34567899999773 5677789999854
No 58
>2y1n_A E3 ubiquitin-protein ligase; ligase-transferase complex, ubiquitin ring E3 ligase; HET: PTR; 2.00A {Homo sapiens} PDB: 2y1m_A* 4a4c_A* 4a4b_A* 1fbv_A* 3vgo_A 4a49_A* 2k4d_A 2ldr_A*
Probab=93.31 E-value=0.037 Score=53.77 Aligned_cols=24 Identities=42% Similarity=0.946 Sum_probs=22.0
Q ss_pred cccccccccccccEEEecCCceee
Q psy3967 298 GRLCKICYQREMGVVFLPCGHIVA 321 (324)
Q Consensus 298 ~~~C~iC~~~~~~~~~~PCgH~~~ 321 (324)
...|.||++...+.+++||||..|
T Consensus 332 ~~~C~ICle~~~~pv~lpCGH~FC 355 (389)
T 2y1n_A 332 FQLCKICAENDKDVKIEPCGHLMC 355 (389)
T ss_dssp SSBCTTTSSSBCCEEEETTCCEEC
T ss_pred CCCCCccCcCCCCeEEeCCCChhh
Confidence 468999999999999999999974
No 59
>3ztg_A E3 ubiquitin-protein ligase RBBP6; PACT, U-BOX, mRNA processing, mRNA splicing; NMR {Homo sapiens}
Probab=93.11 E-value=0.049 Score=41.17 Aligned_cols=28 Identities=36% Similarity=0.721 Sum_probs=24.0
Q ss_pred CCCccccccccccccccEEEec-CCceee
Q psy3967 294 PNSDGRLCKICYQREMGVVFLP-CGHIVA 321 (324)
Q Consensus 294 ~~~~~~~C~iC~~~~~~~~~~P-CgH~~~ 321 (324)
...+...|.||++.-.+-+.+| |||..+
T Consensus 9 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC 37 (92)
T 3ztg_A 9 PIPDELLCLICKDIMTDAVVIPCCGNSYC 37 (92)
T ss_dssp CCCTTTEETTTTEECSSCEECTTTCCEEC
T ss_pred cCCcCCCCCCCChhhcCceECCCCCCHHH
Confidence 3456789999999999999999 999764
No 60
>1iym_A EL5; ring-H2 finger, ubiquitin ligase, DNA binding protein; NMR {Oryza sativa} SCOP: g.44.1.1
Probab=92.75 E-value=0.05 Score=36.97 Aligned_cols=25 Identities=40% Similarity=0.844 Sum_probs=19.9
Q ss_pred cccccccccccccc---EEEec-CCceee
Q psy3967 297 DGRLCKICYQREMG---VVFLP-CGHIVA 321 (324)
Q Consensus 297 ~~~~C~iC~~~~~~---~~~~P-CgH~~~ 321 (324)
+...|.||++.-.+ ++.+| |||...
T Consensus 4 ~~~~C~IC~~~~~~~~~~~~~~~C~H~f~ 32 (55)
T 1iym_A 4 DGVECAVCLAELEDGEEARFLPRCGHGFH 32 (55)
T ss_dssp CSCCCTTTCCCCCTTSCCEECSSSCCEEC
T ss_pred CCCcCccCCccccCCCceEECCCCCCccc
Confidence 45689999988666 88888 999743
No 61
>3ng2_A RNF4, snurf, ring finger protein 4; ring domain, E3 ligase, ubiquitylation, sumoylation, zinc-FI metal binding protein; 1.80A {Rattus norvegicus}
Probab=92.44 E-value=0.045 Score=39.11 Aligned_cols=25 Identities=28% Similarity=0.611 Sum_probs=20.3
Q ss_pred ccccccccccccccE-------EEecCCceee
Q psy3967 297 DGRLCKICYQREMGV-------VFLPCGHIVA 321 (324)
Q Consensus 297 ~~~~C~iC~~~~~~~-------~~~PCgH~~~ 321 (324)
+...|.||++.-.+. +++||||..+
T Consensus 9 ~~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc 40 (71)
T 3ng2_A 9 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFC 40 (71)
T ss_dssp TCCBCTTTCCBHHHHHTTTCCEEECTTSCEEE
T ss_pred CCCCCcccChhhhccccccCCeEeCCCCChHh
Confidence 467899999886664 9999999754
No 62
>2xeu_A Ring finger protein 4; transcription, zinc-finger, metal-binding; HET: SUC; 1.50A {Homo sapiens}
Probab=92.41 E-value=0.046 Score=38.06 Aligned_cols=24 Identities=29% Similarity=0.602 Sum_probs=19.4
Q ss_pred cccccccccccccE-------EEecCCceee
Q psy3967 298 GRLCKICYQREMGV-------VFLPCGHIVA 321 (324)
Q Consensus 298 ~~~C~iC~~~~~~~-------~~~PCgH~~~ 321 (324)
...|.||++.-.+. +++||||..+
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~~~CgH~fc 33 (64)
T 2xeu_A 3 MVSCPICMDGYSEIVQNGRLIVSTECGHVFC 33 (64)
T ss_dssp CCBCTTTCCBHHHHHHTTCCEEEETTSCEEE
T ss_pred CCCCCccChhhhCccccCCCEEeCCCCCchh
Confidence 46799999976653 8999999854
No 63
>2l0b_A E3 ubiquitin-protein ligase praja-1; zinc finger, NESG, structural genomics, PSI-2, protein struc initiative; NMR {Homo sapiens}
Probab=92.26 E-value=0.096 Score=39.83 Aligned_cols=26 Identities=27% Similarity=0.566 Sum_probs=20.8
Q ss_pred Ccccccccccccccc---EEEecCCceee
Q psy3967 296 SDGRLCKICYQREMG---VVFLPCGHIVA 321 (324)
Q Consensus 296 ~~~~~C~iC~~~~~~---~~~~PCgH~~~ 321 (324)
.+...|.||++.-.+ ++.+||||..+
T Consensus 38 ~~~~~C~IC~~~~~~~~~~~~l~C~H~Fh 66 (91)
T 2l0b_A 38 GQEMCCPICCSEYVKGDVATELPCHHYFH 66 (91)
T ss_dssp SSCSEETTTTEECCTTCEEEEETTTEEEE
T ss_pred CCCCCCcccChhhcCCCcEEecCCCChHH
Confidence 456789999977655 88999999754
No 64
>1x4j_A Ring finger protein 38; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=92.25 E-value=0.1 Score=37.94 Aligned_cols=26 Identities=31% Similarity=0.644 Sum_probs=19.7
Q ss_pred Cccccccccccc---cccEEEecCCceee
Q psy3967 296 SDGRLCKICYQR---EMGVVFLPCGHIVA 321 (324)
Q Consensus 296 ~~~~~C~iC~~~---~~~~~~~PCgH~~~ 321 (324)
.+...|.||++. ...++.+||||+..
T Consensus 21 ~~~~~C~IC~~~~~~~~~~~~l~C~H~fh 49 (75)
T 1x4j_A 21 SEQTLCVVCMCDFESRQLLRVLPCNHEFH 49 (75)
T ss_dssp SSCCEETTTTEECCBTCEEEEETTTEEEE
T ss_pred CCCCCCeECCcccCCCCeEEEECCCCHhH
Confidence 346789999955 34568999999854
No 65
>3l11_A E3 ubiquitin-protein ligase RNF168; E3 ligase, ring domain, DNA damage, chromatin regulator, CHR protein, DNA repair, metal-binding, nucleus; 2.12A {Homo sapiens}
Probab=92.24 E-value=0.053 Score=42.87 Aligned_cols=27 Identities=30% Similarity=0.597 Sum_probs=23.4
Q ss_pred CCccccccccccccccEEEecCCceee
Q psy3967 295 NSDGRLCKICYQREMGVVFLPCGHIVA 321 (324)
Q Consensus 295 ~~~~~~C~iC~~~~~~~~~~PCgH~~~ 321 (324)
..+...|.||++.-.+-+.+||||..+
T Consensus 12 ~~~~~~C~iC~~~~~~p~~~~CgH~fC 38 (115)
T 3l11_A 12 SLSECQCGICMEILVEPVTLPCNHTLC 38 (115)
T ss_dssp CHHHHBCTTTCSBCSSCEECTTSCEEC
T ss_pred CCCCCCCccCCcccCceeEcCCCCHHh
Confidence 445788999999999999999999765
No 66
>1g25_A CDK-activating kinase assembly factor MAT1; ring finger (C3HC4), metal binding protein; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=91.93 E-value=0.042 Score=38.89 Aligned_cols=24 Identities=21% Similarity=0.533 Sum_probs=17.5
Q ss_pred ccccccccc-cccc----EEEecCCceee
Q psy3967 298 GRLCKICYQ-REMG----VVFLPCGHIVA 321 (324)
Q Consensus 298 ~~~C~iC~~-~~~~----~~~~PCgH~~~ 321 (324)
+..|.||++ .-.+ ++++||||..+
T Consensus 3 ~~~C~IC~~~~~~~~~~~~~~~~CgH~fC 31 (65)
T 1g25_A 3 DQGCPRCKTTKYRNPSLKLMVNVCGHTLC 31 (65)
T ss_dssp TTCCSTTTTHHHHCSSCCEEECTTCCCEE
T ss_pred CCcCCcCCCCccCCCccCeecCCCCCHhH
Confidence 467999999 2222 26789999865
No 67
>3fl2_A E3 ubiquitin-protein ligase UHRF1; cell cycle, DNA damage, DNA repair, ring finger domain, metal binding, DNA replication; 1.75A {Homo sapiens}
Probab=91.63 E-value=0.066 Score=42.94 Aligned_cols=26 Identities=19% Similarity=0.346 Sum_probs=22.7
Q ss_pred CccccccccccccccEEEecCCceee
Q psy3967 296 SDGRLCKICYQREMGVVFLPCGHIVA 321 (324)
Q Consensus 296 ~~~~~C~iC~~~~~~~~~~PCgH~~~ 321 (324)
.+...|.||++.-.+-+.+||||..+
T Consensus 50 ~~~~~C~IC~~~~~~p~~~~CgH~fC 75 (124)
T 3fl2_A 50 EETFQCICCQELVFRPITTVCQHNVC 75 (124)
T ss_dssp HHHTBCTTTSSBCSSEEECTTSCEEE
T ss_pred ccCCCCCcCChHHcCcEEeeCCCccc
Confidence 45678999999999999999999765
No 68
>1t1h_A Gspef-atpub14, armadillo repeat containing protein; ubiquitin ligase, E3 ligase, U-BOX,; NMR {Arabidopsis thaliana} SCOP: g.44.1.2
Probab=91.44 E-value=0.14 Score=37.30 Aligned_cols=26 Identities=15% Similarity=0.198 Sum_probs=22.9
Q ss_pred CccccccccccccccEEEecCCceee
Q psy3967 296 SDGRLCKICYQREMGVVFLPCGHIVA 321 (324)
Q Consensus 296 ~~~~~C~iC~~~~~~~~~~PCgH~~~ 321 (324)
.+...|.||++.-.+-|.+||||..+
T Consensus 6 ~~~~~C~IC~~~~~~Pv~~~CgH~fc 31 (78)
T 1t1h_A 6 PEYFRCPISLELMKDPVIVSTGQTYE 31 (78)
T ss_dssp SSSSSCTTTSCCCSSEEEETTTEEEE
T ss_pred cccCCCCCccccccCCEEcCCCCeec
Confidence 45678999999999999999999865
No 69
>1e4u_A Transcriptional repressor NOT4; gene regulation, transcriptional control; NMR {Homo sapiens} SCOP: g.44.1.1 PDB: 1ur6_B
Probab=91.09 E-value=0.056 Score=40.46 Aligned_cols=27 Identities=26% Similarity=0.673 Sum_probs=20.8
Q ss_pred CCcccccccccccc--ccEEEec--CCceee
Q psy3967 295 NSDGRLCKICYQRE--MGVVFLP--CGHIVA 321 (324)
Q Consensus 295 ~~~~~~C~iC~~~~--~~~~~~P--CgH~~~ 321 (324)
..++..|-||++.- .+++|+| |||..+
T Consensus 8 ~~~~~~CpICle~~~~~d~~~~p~~CGH~fC 38 (78)
T 1e4u_A 8 KEDPVECPLCMEPLEIDDINFFPCTCGYQIC 38 (78)
T ss_dssp CCCCCBCTTTCCBCCTTTTTCCSSTTSCCCC
T ss_pred cccCCcCCccCccCccccccccccCCCCCcC
Confidence 34577899999965 4677887 999754
No 70
>3hct_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.10A {Homo sapiens} PDB: 3hcu_A 2eci_A 2jmd_A
Probab=90.50 E-value=0.16 Score=40.43 Aligned_cols=28 Identities=32% Similarity=0.579 Sum_probs=24.1
Q ss_pred CCCccccccccccccccEEEecCCceee
Q psy3967 294 PNSDGRLCKICYQREMGVVFLPCGHIVA 321 (324)
Q Consensus 294 ~~~~~~~C~iC~~~~~~~~~~PCgH~~~ 321 (324)
...+...|.||++.-.+-+.+||||..+
T Consensus 14 ~~~~~~~C~IC~~~~~~p~~~~CgH~fC 41 (118)
T 3hct_A 14 PLESKYECPICLMALREAVQTPCGHRFC 41 (118)
T ss_dssp CCCGGGBCTTTCSBCSSEEECTTSCEEE
T ss_pred CCCCCCCCCcCChhhcCeEECCcCChhh
Confidence 3456789999999999999999999765
No 71
>1z6u_A NP95-like ring finger protein isoform B; structural genomics consortium, ligase, ubiquitin-protein ligase, cell cycle regulation, SGC; 2.10A {Homo sapiens}
Probab=90.14 E-value=0.11 Score=43.56 Aligned_cols=25 Identities=24% Similarity=0.359 Sum_probs=22.2
Q ss_pred ccccccccccccccEEEecCCceee
Q psy3967 297 DGRLCKICYQREMGVVFLPCGHIVA 321 (324)
Q Consensus 297 ~~~~C~iC~~~~~~~~~~PCgH~~~ 321 (324)
+...|.||++.-.+-+.+||||..+
T Consensus 77 ~~~~C~IC~~~~~~pv~~~CgH~fC 101 (150)
T 1z6u_A 77 QSFMCVCCQELVYQPVTTECFHNVC 101 (150)
T ss_dssp HHTBCTTTSSBCSSEEECTTSCEEE
T ss_pred cCCEeecCChhhcCCEEcCCCCchh
Confidence 4678999999999999999999764
No 72
>2ckl_A Polycomb group ring finger protein 4; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_B 2h0d_A
Probab=89.77 E-value=0.17 Score=39.43 Aligned_cols=27 Identities=15% Similarity=0.304 Sum_probs=22.9
Q ss_pred CCccccccccccccccEEEe-cCCceee
Q psy3967 295 NSDGRLCKICYQREMGVVFL-PCGHIVA 321 (324)
Q Consensus 295 ~~~~~~C~iC~~~~~~~~~~-PCgH~~~ 321 (324)
..+...|.||++.-.+-+.+ ||||..+
T Consensus 12 ~~~~~~C~IC~~~~~~p~~~~~CgH~fC 39 (108)
T 2ckl_A 12 LNPHLMCVLCGGYFIDATTIIECLHSFC 39 (108)
T ss_dssp HGGGTBCTTTSSBCSSEEEETTTCCEEE
T ss_pred cCCcCCCccCChHHhCcCEeCCCCChhh
Confidence 34567899999999999998 9999865
No 73
>2ckl_B Ubiquitin ligase protein RING2; BMI1, RING1B, polycomb, E3-ligase, nuclear protein, chromosomal protein, transcription regulation; 2.0A {Mus musculus} PDB: 3rpg_C 2h0d_B
Probab=89.69 E-value=0.12 Score=43.53 Aligned_cols=28 Identities=18% Similarity=0.337 Sum_probs=23.7
Q ss_pred CCCccccccccccccccEEEe-cCCceee
Q psy3967 294 PNSDGRLCKICYQREMGVVFL-PCGHIVA 321 (324)
Q Consensus 294 ~~~~~~~C~iC~~~~~~~~~~-PCgH~~~ 321 (324)
...+...|.||++.-.+.+.+ ||||..+
T Consensus 50 ~~~~~~~C~IC~~~~~~p~~~~~CgH~fC 78 (165)
T 2ckl_B 50 SLHSELMCPICLDMLKNTMTTKECLHRFC 78 (165)
T ss_dssp CCHHHHBCTTTSSBCSSEEEETTTCCEEE
T ss_pred hCCCCCCCcccChHhhCcCEeCCCCChhH
Confidence 345677899999999998888 9999875
No 74
>3lrq_A E3 ubiquitin-protein ligase TRIM37; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: MSE; 2.29A {Homo sapiens}
Probab=89.49 E-value=0.12 Score=39.90 Aligned_cols=27 Identities=15% Similarity=0.351 Sum_probs=23.5
Q ss_pred CCccccccccccccccEEE-ecCCceee
Q psy3967 295 NSDGRLCKICYQREMGVVF-LPCGHIVA 321 (324)
Q Consensus 295 ~~~~~~C~iC~~~~~~~~~-~PCgH~~~ 321 (324)
+.+...|.||++.-.+-+. +||||..+
T Consensus 19 l~~~~~C~IC~~~~~~p~~~~~CgH~FC 46 (100)
T 3lrq_A 19 IAEVFRCFICMEKLRDARLCPHCSKLCC 46 (100)
T ss_dssp HHHHTBCTTTCSBCSSEEECTTTCCEEE
T ss_pred CCCCCCCccCCccccCccccCCCCChhh
Confidence 4457789999999999999 99999865
No 75
>1jm7_A BRCA1, breast cancer type 1 susceptibility protein; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=89.41 E-value=0.057 Score=42.14 Aligned_cols=25 Identities=28% Similarity=0.416 Sum_probs=21.8
Q ss_pred ccccccccccccccEEEecCCceee
Q psy3967 297 DGRLCKICYQREMGVVFLPCGHIVA 321 (324)
Q Consensus 297 ~~~~C~iC~~~~~~~~~~PCgH~~~ 321 (324)
+...|.||++.-.+.+.+||||..+
T Consensus 20 ~~~~C~IC~~~~~~p~~~~CgH~fC 44 (112)
T 1jm7_A 20 KILECPICLELIKEPVSTKCDHIFC 44 (112)
T ss_dssp HHTSCSSSCCCCSSCCBCTTSCCCC
T ss_pred CCCCCcccChhhcCeEECCCCCHHH
Confidence 4568999999999999999999764
No 76
>2y43_A E3 ubiquitin-protein ligase RAD18; DNA repair, metal-binding, translesion synthesis, UB conjugation pathway; 1.80A {Homo sapiens}
Probab=89.14 E-value=0.15 Score=39.08 Aligned_cols=27 Identities=22% Similarity=0.417 Sum_probs=22.5
Q ss_pred CCccccccccccccccEEEe-cCCceee
Q psy3967 295 NSDGRLCKICYQREMGVVFL-PCGHIVA 321 (324)
Q Consensus 295 ~~~~~~C~iC~~~~~~~~~~-PCgH~~~ 321 (324)
..+...|.||++.-.+-+.+ ||||..+
T Consensus 19 ~~~~~~C~IC~~~~~~p~~~~~CgH~fC 46 (99)
T 2y43_A 19 IDDLLRCGICFEYFNIAMIIPQCSHNYC 46 (99)
T ss_dssp HHHHTBCTTTCSBCSSEEECTTTCCEEE
T ss_pred CCCCCCcccCChhhCCcCEECCCCCHhh
Confidence 34567899999999999888 9999764
No 77
>2kr4_A Ubiquitin conjugation factor E4 B; U-BOX, UFD2, ring, E3 ligase, UBL conjugation pathway; NMR {Mus musculus}
Probab=88.14 E-value=0.49 Score=35.56 Aligned_cols=28 Identities=18% Similarity=0.113 Sum_probs=24.2
Q ss_pred CCCccccccccccccccEEEecCCceee
Q psy3967 294 PNSDGRLCKICYQREMGVVFLPCGHIVA 321 (324)
Q Consensus 294 ~~~~~~~C~iC~~~~~~~~~~PCgH~~~ 321 (324)
...+.-.|-||++--.|=|.+||||..+
T Consensus 10 ~~p~~~~CpI~~~~m~dPV~~~cGhtf~ 37 (85)
T 2kr4_A 10 DAPDEFRDPLMDTLMTDPVRLPSGTVMD 37 (85)
T ss_dssp TCCTTTBCTTTCSBCSSEEECTTSCEEE
T ss_pred cCchheECcccCchhcCCeECCCCCEEC
Confidence 4456789999999999999999999854
No 78
>1rmd_A RAG1; V(D)J recombination, antibody, MAD, ring finger, zinc binuclear cluster, zinc finger, DNA-binding protein; 2.10A {Mus musculus} SCOP: g.37.1.1 g.44.1.1
Probab=86.11 E-value=0.29 Score=38.55 Aligned_cols=27 Identities=22% Similarity=0.373 Sum_probs=23.4
Q ss_pred CCccccccccccccccEEEecCCceee
Q psy3967 295 NSDGRLCKICYQREMGVVFLPCGHIVA 321 (324)
Q Consensus 295 ~~~~~~C~iC~~~~~~~~~~PCgH~~~ 321 (324)
+.+...|.||++.-.+-+.+||||..+
T Consensus 20 ~~~~~~C~IC~~~~~~p~~~~CgH~fC 46 (116)
T 1rmd_A 20 FVKSISCQICEHILADPVETSCKHLFC 46 (116)
T ss_dssp HHHHTBCTTTCSBCSSEEECTTSCEEE
T ss_pred ccCCCCCCCCCcHhcCcEEcCCCCccc
Confidence 345678999999999999999999865
No 79
>1jm7_B BARD1, BRCA1-associated ring domain protein 1; ring finger, zinc-binding protein, heterodimer, ubiquitin ligase, antitumor; NMR {Homo sapiens} SCOP: g.44.1.1
Probab=85.34 E-value=0.16 Score=40.27 Aligned_cols=27 Identities=26% Similarity=0.313 Sum_probs=23.2
Q ss_pred CCccccccccccccccEEEe-cCCceee
Q psy3967 295 NSDGRLCKICYQREMGVVFL-PCGHIVA 321 (324)
Q Consensus 295 ~~~~~~C~iC~~~~~~~~~~-PCgH~~~ 321 (324)
+.+...|.||++.-.+-+.+ ||||..+
T Consensus 19 l~~~~~C~IC~~~~~~pv~~~~CgH~fC 46 (117)
T 1jm7_B 19 LEKLLRCSRCTNILREPVCLGGCEHIFC 46 (117)
T ss_dssp HHHTTSCSSSCSCCSSCBCCCSSSCCBC
T ss_pred chhCCCCCCCChHhhCccEeCCCCCHHH
Confidence 34567899999999999999 9999865
No 80
>1wgm_A Ubiquitin conjugation factor E4A; ubiquitinating enzyme, KIAA0126, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: g.44.1.2
Probab=83.78 E-value=1.5 Score=33.87 Aligned_cols=28 Identities=25% Similarity=0.127 Sum_probs=24.4
Q ss_pred CCCccccccccccccccEEEecCC-ceee
Q psy3967 294 PNSDGRLCKICYQREMGVVFLPCG-HIVA 321 (324)
Q Consensus 294 ~~~~~~~C~iC~~~~~~~~~~PCg-H~~~ 321 (324)
...+...|-||++--.|=|.+||| |..+
T Consensus 18 ~~p~~~~CpI~~~~m~dPV~~~cG~htf~ 46 (98)
T 1wgm_A 18 DACDEFLDPIMSTLMCDPVVLPSSRVTVD 46 (98)
T ss_dssp SCCTTTBCTTTCSBCSSEEECTTTCCEEE
T ss_pred cCcHhcCCcCccccccCCeECCCCCeEEC
Confidence 455678999999999999999999 9765
No 81
>3knv_A TNF receptor-associated factor 2; cross-brace, alternative splicing, apoptosis, cytoplasm, metal-binding, UBL conjugation, zinc, zinc-finger; 1.90A {Homo sapiens}
Probab=82.13 E-value=0.63 Score=38.41 Aligned_cols=28 Identities=21% Similarity=0.317 Sum_probs=24.0
Q ss_pred CCCccccccccccccccEEEecCCceee
Q psy3967 294 PNSDGRLCKICYQREMGVVFLPCGHIVA 321 (324)
Q Consensus 294 ~~~~~~~C~iC~~~~~~~~~~PCgH~~~ 321 (324)
...+...|.||++.-.+-|.+||||..+
T Consensus 27 ~l~~~~~C~IC~~~~~~pv~~~CgH~FC 54 (141)
T 3knv_A 27 KLEAKYLCSACRNVLRRPFQAQCGHRYC 54 (141)
T ss_dssp GCCGGGBCTTTCSBCSSEEECTTSCEEE
T ss_pred cCCcCcCCCCCChhhcCcEECCCCCccC
Confidence 3456789999999999999999999865
No 82
>2ecl_A Ring-box protein 2; RNF7, ring domian, zinc-binding domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=81.24 E-value=0.62 Score=34.49 Aligned_cols=24 Identities=33% Similarity=0.623 Sum_probs=14.7
Q ss_pred ccccccccccccc--------------EEEe-cCCceee
Q psy3967 298 GRLCKICYQREMG--------------VVFL-PCGHIVA 321 (324)
Q Consensus 298 ~~~C~iC~~~~~~--------------~~~~-PCgH~~~ 321 (324)
...|.||++.-.+ ++.+ +|||+-.
T Consensus 15 ~~~C~IC~~~~~~~C~iC~~~~~~~~~~~~~~~C~H~FH 53 (81)
T 2ecl_A 15 CDTCAICRVQVMDACLRCQAENKQEDCVVVWGECNHSFH 53 (81)
T ss_dssp CSCBTTTTBCTTSCCTTHHHHTCTTTCCEEEETTSCEEE
T ss_pred CCCCcccChhhhccCcccccccCCCceEEEeCCCCCccC
Confidence 3457777765543 4455 5999853
No 83
>2kre_A Ubiquitin conjugation factor E4 B; U-box domain, E3 ubiquitin ligase, E4 polyubiquitin chain EL factor, phosphoprotein, UBL conjugation pathway; NMR {Homo sapiens} PDB: 3l1x_A 3l1z_B
Probab=80.84 E-value=1.4 Score=34.19 Aligned_cols=28 Identities=21% Similarity=0.123 Sum_probs=24.3
Q ss_pred CCCccccccccccccccEEEecCCceee
Q psy3967 294 PNSDGRLCKICYQREMGVVFLPCGHIVA 321 (324)
Q Consensus 294 ~~~~~~~C~iC~~~~~~~~~~PCgH~~~ 321 (324)
...+.-.|-||++--.|=|.+||||..+
T Consensus 25 ~~p~~~~CpI~~~~m~dPV~~~cGhtf~ 52 (100)
T 2kre_A 25 DAPDEFRDPLMDTLMTDPVRLPSGTIMD 52 (100)
T ss_dssp SCSTTTBCTTTCSBCSSEEEETTTEEEE
T ss_pred cCcHhhCCcCccCcccCCeECCCCCEEc
Confidence 4456789999999999999999999854
No 84
>1v87_A Deltex protein 2; ring-H2 domain, zinc-binding domain, notch signaling, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.44.1.1
Probab=79.60 E-value=0.91 Score=35.37 Aligned_cols=23 Identities=22% Similarity=0.434 Sum_probs=17.5
Q ss_pred ccccccccccc------------------cEEEecCCceee
Q psy3967 299 RLCKICYQREM------------------GVVFLPCGHIVA 321 (324)
Q Consensus 299 ~~C~iC~~~~~------------------~~~~~PCgH~~~ 321 (324)
..|.||++.-. -++++||||+-.
T Consensus 26 ~~C~ICl~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~H~Fh 66 (114)
T 1v87_A 26 EDCIICMEKLAVASGYSDMTDSKALGPMVVGRLTKCSHAFH 66 (114)
T ss_dssp CEETTTTEETTSCCSTTTTCCCSSSCSSCCEEESSSCCEEC
T ss_pred CcCccCChhhcCcccccccccccccCcccceecCCCCCccc
Confidence 47999998743 345899999754
No 85
>4ap4_A E3 ubiquitin ligase RNF4; ligase-signalling protein complex, chimera; 2.21A {Rattus norvegicus}
Probab=74.28 E-value=1.2 Score=35.12 Aligned_cols=25 Identities=28% Similarity=0.611 Sum_probs=20.2
Q ss_pred ccccccccccccccE-------EEecCCceee
Q psy3967 297 DGRLCKICYQREMGV-------VFLPCGHIVA 321 (324)
Q Consensus 297 ~~~~C~iC~~~~~~~-------~~~PCgH~~~ 321 (324)
+...|.||++.-.+. +.++|||+-+
T Consensus 71 ~~~~C~iC~~~~~~~~~~~~~~~~~~CgH~fc 102 (133)
T 4ap4_A 71 GTVSCPICMDGYSEIVQNGRLIVSTECGHVFC 102 (133)
T ss_dssp SSCBCTTTCCBHHHHHHTTCCEEEETTSBEEE
T ss_pred CCCCCCCCCCccccccccCcceEeCCCCChhh
Confidence 456799999876664 9999999865
No 86
>2yu4_A E3 SUMO-protein ligase NSE2; SP-ring domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=73.86 E-value=2.5 Score=32.10 Aligned_cols=25 Identities=28% Similarity=0.396 Sum_probs=22.0
Q ss_pred ccccccccccccccEEEec-CCceee
Q psy3967 297 DGRLCKICYQREMGVVFLP-CGHIVA 321 (324)
Q Consensus 297 ~~~~C~iC~~~~~~~~~~P-CgH~~~ 321 (324)
+...|-||++--.+=|.+| |||.-+
T Consensus 6 ~~~~CPI~~~~~~dPV~~~~cGh~f~ 31 (94)
T 2yu4_A 6 SGFTCPITKEEMKKPVKNKVCGHTYE 31 (94)
T ss_dssp SCCBCTTTCSBCSSEEEESSSCCEEE
T ss_pred cEeECcCcCchhcCCEEcCCCCCeec
Confidence 4678999999999999997 999764
No 87
>2d8s_A Cellular modulator of immune recognition; C-MIR, march8, ring domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=73.83 E-value=2 Score=31.96 Aligned_cols=24 Identities=29% Similarity=0.735 Sum_probs=17.3
Q ss_pred cccccccccccc--ccEEEecCC-----cee
Q psy3967 297 DGRLCKICYQRE--MGVVFLPCG-----HIV 320 (324)
Q Consensus 297 ~~~~C~iC~~~~--~~~~~~PCg-----H~~ 320 (324)
+...|.||++.. .+.+++||+ |.+
T Consensus 14 ~~~~C~IC~~~~~~~~~l~~pC~C~Gs~h~f 44 (80)
T 2d8s_A 14 SQDICRICHCEGDDESPLITPCHCTGSLHFV 44 (80)
T ss_dssp TSCCCSSSCCCCCSSSCEECSSSCCSSSCCE
T ss_pred CCCCCeEcCccccCCCeeEeccccCCcCCee
Confidence 356799999642 345679996 875
No 88
>2c2l_A CHIP, carboxy terminus of HSP70-interacting protein; chaperone, E3 ligase, ubiquitinylation, TPR, heat-shock protein complex; 3.3A {Mus musculus} SCOP: a.118.8.1 g.44.1.2
Probab=71.76 E-value=3 Score=37.07 Aligned_cols=26 Identities=19% Similarity=0.141 Sum_probs=23.2
Q ss_pred CccccccccccccccEEEecCCceee
Q psy3967 296 SDGRLCKICYQREMGVVFLPCGHIVA 321 (324)
Q Consensus 296 ~~~~~C~iC~~~~~~~~~~PCgH~~~ 321 (324)
.+...|.||++--.+=|.+||||..+
T Consensus 206 ~~~~~c~i~~~~~~dPv~~~~gh~f~ 231 (281)
T 2c2l_A 206 PDYLCGKISFELMREPCITPSGITYD 231 (281)
T ss_dssp CSTTBCTTTCSBCSSEEECSSCCEEE
T ss_pred CcccCCcCcCCHhcCCeECCCCCEEC
Confidence 35678999999999999999999866
No 89
>3dpl_R Ring-box protein 1; ubiquitin, NEDD8, cullin, HOST-virus interaction, receptor, UBL conjugation, UBL conjugation pathway, acetylation, cytoplasm; 2.60A {Homo sapiens} SCOP: g.44.1.1 PDB: 3dqv_R 3rtr_B 4f52_B 1u6g_B 2hye_D* 4a0c_D 4a0l_F* 1ldj_B 1ldk_C 2lgv_A
Probab=66.55 E-value=2.5 Score=33.22 Aligned_cols=12 Identities=25% Similarity=0.451 Sum_probs=9.4
Q ss_pred cEEEecCCceee
Q psy3967 310 GVVFLPCGHIVA 321 (324)
Q Consensus 310 ~~~~~PCgH~~~ 321 (324)
.++++||||+-.
T Consensus 67 ~~~~~~C~H~FH 78 (106)
T 3dpl_R 67 TVAWGVCNHAFH 78 (106)
T ss_dssp CEEEETTSCEEE
T ss_pred eEeecccCcEEC
Confidence 378899999853
No 90
>2f42_A STIP1 homology and U-box containing protein 1; chaperone; 2.50A {Danio rerio} PDB: 2c2v_S 2oxq_C
Probab=60.76 E-value=5.5 Score=34.34 Aligned_cols=27 Identities=19% Similarity=0.101 Sum_probs=23.5
Q ss_pred CCccccccccccccccEEEecCCceee
Q psy3967 295 NSDGRLCKICYQREMGVVFLPCGHIVA 321 (324)
Q Consensus 295 ~~~~~~C~iC~~~~~~~~~~PCgH~~~ 321 (324)
..+...|.||++--.|=|.+||||..+
T Consensus 103 ip~~f~CPI~~elm~DPV~~~~Ghtfe 129 (179)
T 2f42_A 103 IPDYLCGKISFELMREPCITPSGITYD 129 (179)
T ss_dssp CCGGGBCTTTCSBCSSEEECTTSCEEE
T ss_pred CcHhhcccCccccCCCCeECCCCCEEC
Confidence 345789999999999999999999764
No 91
>1vyx_A ORF K3, K3RING; zinc-binding protein, ring domain, cross-brace motif; NMR {Human herpesvirus 8} SCOP: g.44.1.3
Probab=59.14 E-value=2.3 Score=29.84 Aligned_cols=22 Identities=32% Similarity=0.585 Sum_probs=16.8
Q ss_pred ccccccccccccccEEEecCCc
Q psy3967 297 DGRLCKICYQREMGVVFLPCGH 318 (324)
Q Consensus 297 ~~~~C~iC~~~~~~~~~~PCgH 318 (324)
+...|.||++...+-+++||.+
T Consensus 5 ~~~~CrIC~~~~~~~l~~PC~C 26 (60)
T 1vyx_A 5 DVPVCWICNEELGNERFRACGC 26 (60)
T ss_dssp SCCEETTTTEECSCCCCCSCCC
T ss_pred CCCEeEEeecCCCCceecCcCC
Confidence 4568999998766667899753
No 92
>4a0k_B E3 ubiquitin-protein ligase RBX1; ligase-DNA-binding protein-DNA complex, DNA-binding protein- complex; HET: DNA 3DR; 5.93A {Mus musculus}
Probab=47.48 E-value=4.2 Score=32.58 Aligned_cols=22 Identities=32% Similarity=0.628 Sum_probs=0.0
Q ss_pred ccccccccccc------------------cEEEecCCcee
Q psy3967 299 RLCKICYQREM------------------GVVFLPCGHIV 320 (324)
Q Consensus 299 ~~C~iC~~~~~------------------~~~~~PCgH~~ 320 (324)
..|.||++.-. .++++||||+-
T Consensus 49 d~CaICl~~~~~~c~~C~~~~~~~~~~~~~v~~~~C~H~F 88 (117)
T 4a0k_B 49 DNCAICRNHIMDLCIECQANQASATSEECTVAWGVCNHAF 88 (117)
T ss_dssp ----------------------------------------
T ss_pred CcCeECChhhcCcChhhhcccccccccccccccCCcCceE
Confidence 46999986643 34557999974
No 93
>1ef4_A Subunit N, DNA-directed RNA polymerase; three helix bundle, zinc binding, structural genomics, PSI; NMR {Methanothermobacterthermautotrophicus} SCOP: a.4.11.1
Probab=46.08 E-value=2.9 Score=29.29 Aligned_cols=11 Identities=27% Similarity=0.860 Sum_probs=10.1
Q ss_pred eEEeeeCCccc
Q psy3967 210 TLCFRCGGGLK 220 (324)
Q Consensus 210 v~Cf~Cg~~l~ 220 (324)
|+||.||..+.
T Consensus 4 VRCFTCGkvi~ 14 (55)
T 1ef4_A 4 VRCLSCGKPVS 14 (55)
T ss_dssp SSCSCTTSCCH
T ss_pred eecCCCCCChh
Confidence 78999999997
No 94
>1twf_J DNA-directed RNA polymerases I, II, and III 8.3 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: a.4.11.1 PDB: 1i3q_J 1i6h_J 1k83_J* 1nik_J 1nt9_J 1pqv_J 1r5u_J 1r9s_J* 1r9t_J* 1sfo_J* 1twa_J* 1twc_J* 1i50_J* 1twg_J* 1twh_J* 1wcm_J 1y1v_J 1y1w_J 1y1y_J 1y77_J* ...
Probab=42.99 E-value=5.1 Score=29.36 Aligned_cols=12 Identities=33% Similarity=0.841 Sum_probs=10.7
Q ss_pred ceEEeeeCCccc
Q psy3967 209 QTLCFRCGGGLK 220 (324)
Q Consensus 209 ~v~Cf~Cg~~l~ 220 (324)
-|+||.||..+.
T Consensus 4 PVRCFTCGkvi~ 15 (70)
T 1twf_J 4 PVRCFSCGKVVG 15 (70)
T ss_dssp CSBCTTTCCBCT
T ss_pred CeecCCCCCChH
Confidence 378999999998
No 95
>4ayb_N DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2wb1_N 2y0s_N 2waq_N 4b1o_N 4b1p_O 2pmz_N 3hkz_N
Probab=33.71 E-value=8.2 Score=27.96 Aligned_cols=15 Identities=27% Similarity=1.019 Sum_probs=12.1
Q ss_pred EeecccCceecc-ccC
Q psy3967 80 VKCIFCGIELGK-WVQ 94 (324)
Q Consensus 80 V~C~~C~~~l~~-w~~ 94 (324)
|+||.||+.+.+ |++
T Consensus 5 VRCFTCGkvi~~k~~~ 20 (66)
T 4ayb_N 5 IRCFTCGSLIADKWQP 20 (66)
T ss_dssp SBCTTTCCBCHHHHHH
T ss_pred cccCCCcHhHHHHHHH
Confidence 799999999953 654
No 96
>2bay_A PRE-mRNA splicing factor PRP19; U-BOX, ubiquitin ligase, E3 ligase; 1.50A {Saccharomyces cerevisiae} SCOP: g.44.1.2 PDB: 1n87_A
Probab=25.78 E-value=32 Score=23.75 Aligned_cols=23 Identities=22% Similarity=0.199 Sum_probs=20.1
Q ss_pred ccccccccccccEEEe-cCCceee
Q psy3967 299 RLCKICYQREMGVVFL-PCGHIVA 321 (324)
Q Consensus 299 ~~C~iC~~~~~~~~~~-PCgH~~~ 321 (324)
..|.||++--.|-|.. +|||+..
T Consensus 4 ~~CpIs~~~m~dPV~~~~sG~~ye 27 (61)
T 2bay_A 4 MLCAISGKVPRRPVLSPKSRTIFE 27 (61)
T ss_dssp CCCTTTCSCCSSEEEETTTTEEEE
T ss_pred EEecCCCCCCCCCEEeCCCCcEEc
Confidence 4699999999999999 9999853
No 97
>3htk_C E3 SUMO-protein ligase MMS21; SUMO E3 ligase, SPL-ring, ring, ATP-binding, chromosomal protein, coiled coil, DNA damage; 2.31A {Saccharomyces cerevisiae}
Probab=24.44 E-value=81 Score=28.77 Aligned_cols=27 Identities=15% Similarity=0.271 Sum_probs=22.4
Q ss_pred CCccccccccccccccEEEe-cCCceee
Q psy3967 295 NSDGRLCKICYQREMGVVFL-PCGHIVA 321 (324)
Q Consensus 295 ~~~~~~C~iC~~~~~~~~~~-PCgH~~~ 321 (324)
......|-||++.-.+=|-. .|||.-+
T Consensus 178 ~~~el~CPIcl~~f~DPVts~~CGHsFc 205 (267)
T 3htk_C 178 GKIELTCPITCKPYEAPLISRKCNHVFD 205 (267)
T ss_dssp SBCCSBCTTTSSBCSSEEEESSSCCEEE
T ss_pred CceeeECcCccCcccCCeeeCCCCCccc
Confidence 45578899999999999975 9999754
Done!