RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy3969
(86 letters)
>d1t1va_ c.47.1.14 (A:) SH3BGRL3 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 93
Score = 51.4 bits (123), Expect = 6e-11
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 10 TVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNP 69
+V G + +K +Q V ILD K I Y ++DI++ ++ +
Sbjct: 10 SVTGSREIKSQQSEVTRILDGKRIQYQLVDISQDNALRDEMRTLAGNPK----------A 59
Query: 70 LPPQIFNEEDYCG 82
PPQI N YCG
Sbjct: 60 TPPQIVNGNHYCG 72
>d1r5aa2 c.47.1.5 (A:2-86) Class delta GST {Mosquito (Anopheles
dirus b), isozyme 1-5 [TaxId: 123217]}
Length = 85
Score = 27.6 bits (61), Expect = 0.071
Identities = 5/40 (12%), Positives = 19/40 (47%), Gaps = 1/40 (2%)
Query: 22 QRVLMILDSKNIDYTVIDI-TEPGKENEKEFMQQNSKATP 60
+ VL++ ++ + + G++ + +F++ N +
Sbjct: 14 RSVLLLAKMIGVELDLKVLNIMEGEQLKPDFVELNPQHCI 53
>d1v2aa2 c.47.1.5 (A:1-83) Class delta GST {Mosquito (Anopheles
dirus b), isozyme 1-6 [TaxId: 123217]}
Length = 83
Score = 27.0 bits (59), Expect = 0.14
Identities = 3/34 (8%), Positives = 8/34 (23%)
Query: 22 QRVLMILDSKNIDYTVIDITEPGKENEKEFMQQN 55
Q +++ I + + N
Sbjct: 13 QSAILLAKKLGITLNLKKTNVHDPVERDALTKLN 46
>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB
{Staphylococcus aureus [TaxId: 1280]}
Length = 312
Score = 27.3 bits (59), Expect = 0.20
Identities = 9/45 (20%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Query: 1 MKKPYK-ISNTVRGVKGVKKRQQRVLMILDSKNIDYTVIDITEPG 44
M+K + I N G + K+ L+ L+ + + + G
Sbjct: 1 MRKRARIIYNPTSGKEQFKRELPDALIKLEKAGYETSAYATEKIG 45
>d1n2aa2 c.47.1.5 (A:1-80) Class beta GST {Escherichia coli
[TaxId: 562]}
Length = 80
Score = 26.4 bits (58), Expect = 0.24
Identities = 7/36 (19%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 22 QRVLMILDSKNIDYTV--IDITEPGKENEKEFMQQN 55
+ L D+T+ +D+ + EN ++ N
Sbjct: 12 LASHITLRESGKDFTLVSVDLMKKRLENGDDYFAVN 47
>d1wdva_ d.116.1.1 (A:) Hypothetical protein APE2540 {Aeropyrum
pernix [TaxId: 56636]}
Length = 150
Score = 26.9 bits (59), Expect = 0.25
Identities = 2/24 (8%), Positives = 14/24 (58%)
Query: 22 QRVLMILDSKNIDYTVIDITEPGK 45
++V + ++ + + ++ + +P +
Sbjct: 1 EKVEEWIKARGLTWRLLIMQKPTR 24
>d1jlva2 c.47.1.5 (A:1-84) Class delta GST {Mosquito (Anopheles
dirus b), isozyme 1-3 [TaxId: 123217]}
Length = 84
Score = 26.1 bits (57), Expect = 0.27
Identities = 6/40 (15%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Query: 22 QRVLMILDSKNIDYTVIDI-TEPGKENEKEFMQQNSKATP 60
+ V M + ++ + G+ + EF++ N +
Sbjct: 13 RAVQMTAAAVGVELNLKLTNLMAGEHMKPEFLKINPQHCI 52
>d1vkia_ d.116.1.1 (A:) Hypothetical protein Atu3699
{Agrobacterium tumefaciens, strain C58 [TaxId: 358]}
Length = 165
Score = 26.2 bits (57), Expect = 0.51
Identities = 5/22 (22%), Positives = 8/22 (36%)
Query: 18 KKRQQRVLMILDSKNIDYTVID 39
+K + LD I +T
Sbjct: 2 RKTATELFEFLDGLGISHTTKQ 23
>d1gwca2 c.47.1.5 (A:4-86) Class tau GST {Aegilops tauschii, also
known as Triticum tauschii [TaxId: 37682]}
Length = 83
Score = 25.4 bits (55), Expect = 0.57
Identities = 8/39 (20%), Positives = 12/39 (30%)
Query: 22 QRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATP 60
RV + L K + Y ++ K K P
Sbjct: 16 TRVKLALALKGLSYEDVEEDLYKKSELLLKSNPVHKKIP 54
>d1axda2 c.47.1.5 (A:1-80) Class phi GST {Maize (Zea mays), type I
[TaxId: 4577]}
Length = 80
Score = 25.3 bits (55), Expect = 0.59
Identities = 6/26 (23%), Positives = 10/26 (38%)
Query: 22 QRVLMILDSKNIDYTVIDITEPGKEN 47
R L+ DY ++ I E+
Sbjct: 15 TRCATALEEAGSDYEIVPINFATAEH 40
>d1pmta2 c.47.1.5 (A:1-80) Class beta GST {Proteus mirabilis
[TaxId: 584]}
Length = 80
Score = 25.0 bits (54), Expect = 0.74
Identities = 7/38 (18%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Query: 20 RQQRVLMILDSKNIDYTVIDITEPGKENEK--EFMQQN 55
++L +D+++ I K+ E +F+ N
Sbjct: 10 CSLSPHIVLRETGLDFSIERIDLRTKKTESGKDFLAIN 47
>d1f2ea2 c.47.1.5 (A:1-80) Class beta GST {Sphingomonas
paucimobilis [TaxId: 13689]}
Length = 80
Score = 25.0 bits (54), Expect = 0.75
Identities = 5/42 (11%), Positives = 12/42 (28%), Gaps = 2/42 (4%)
Query: 22 QRVLMILDSKNIDYTVIDIT--EPGKENEKEFMQQNSKATPS 61
+ L D+ + + E ++F+ N
Sbjct: 12 LAPHIALRETGADFEAVKVDLAVRKTEAGEDFLTVNPSGKVP 53
>d1vjfa_ d.116.1.1 (A:) Hypothetical protein CC0111 {Caulobacter
crescentus [TaxId: 155892]}
Length = 168
Score = 25.0 bits (54), Expect = 1.0
Identities = 3/19 (15%), Positives = 9/19 (47%)
Query: 21 QQRVLMILDSKNIDYTVID 39
+ + D+ +D+ +D
Sbjct: 4 RADLFAFFDAHGVDHKTLD 22
>d1eema2 c.47.1.5 (A:5-102) Class omega GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 98
Score = 24.5 bits (53), Expect = 1.2
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 22 QRVLMILDSKNIDYTVIDITEPGKENE 48
+R ++L +K I + VI+I K
Sbjct: 32 ERTRLVLKAKGIRHEVININLKNKPEW 58
>d1vqow1 d.59.1.1 (W:1-154) Archaeal L30 (L30a) {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 154
Score = 24.7 bits (54), Expect = 1.5
Identities = 5/28 (17%), Positives = 14/28 (50%)
Query: 11 VRGVKGVKKRQQRVLMILDSKNIDYTVI 38
+RG + Q L +L+ ++++ +
Sbjct: 7 LRGEVNMHTDIQDTLEMLNIHHVNHCTL 34
>d1fhea2 c.47.1.5 (A:1-80) Class alpha GST {Fasciola hepatica
[TaxId: 6192]}
Length = 80
Score = 23.8 bits (51), Expect = 1.9
Identities = 5/35 (14%), Positives = 9/35 (25%)
Query: 20 RQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQ 54
Q V + L+ +Y +E
Sbjct: 12 LAQPVRLFLEYLGEEYEEHLYGRDDREKWMSEKFN 46
>d1k0da2 c.47.1.5 (A:109-200) Yeast prion protein ure2p, nitrogen
regulation fragment {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 92
Score = 23.9 bits (51), Expect = 2.3
Identities = 6/54 (11%), Positives = 15/54 (27%)
Query: 22 QRVLMILDSKNIDYTVIDITEPGKENEKEFMQQNSKATPSDSTVKSNPLPPQIF 75
+V ++L Y I + E+ + + + I+
Sbjct: 18 FKVAIVLSELGFHYNTIFLDFNLGEHRAPEFVSVNPNARVPALIDHGMDNLSIW 71
>d1e6ba2 c.47.1.5 (A:8-87) Class zeta GST {Mouse-ear cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 80
Score = 23.4 bits (50), Expect = 2.5
Identities = 7/34 (20%), Positives = 13/34 (38%)
Query: 22 QRVLMILDSKNIDYTVIDITEPGKENEKEFMQQN 55
RV + L K +DY I + + ++
Sbjct: 14 HRVRIALALKGLDYEYIPVNLLKGDQFDSDFKKI 47
>d1abaa_ c.47.1.1 (A:) Glutaredoxin (Grx, thioltransferase)
{Bacteriophage T4 [TaxId: 10665]}
Length = 87
Score = 23.5 bits (50), Expect = 2.7
Identities = 10/62 (16%), Positives = 20/62 (32%), Gaps = 10/62 (16%)
Query: 22 QRVLMILDSKNIDYTVIDITEPGKENE----KEFMQQNSKATPSDSTVKSNPLPPQIFNE 77
+L K + I+I + E + + + T T+ PQ+F
Sbjct: 18 DNAKRLLTVKKQPFEFINIMPEKGVFDDEKIAELLTKLGRDTQIGLTM------PQVFAP 71
Query: 78 ED 79
+
Sbjct: 72 DG 73
>d1gnwa2 c.47.1.5 (A:2-85) Class phi GST {Mouse-ear cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 84
Score = 23.1 bits (49), Expect = 3.7
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 22 QRVLMILDSKNIDYTVIDITEPGKEN 47
+RVL+ L KN+D+ ++ + E+
Sbjct: 14 RRVLIALHEKNLDFELVHVELKDGEH 39
>d1aw9a2 c.47.1.5 (A:2-82) Class phi GST {Maize (Zea mays), type
III [TaxId: 4577]}
Length = 81
Score = 22.7 bits (48), Expect = 5.4
Identities = 5/26 (19%), Positives = 13/26 (50%)
Query: 22 QRVLMILDSKNIDYTVIDITEPGKEN 47
RV +L+ K +D+ ++ + +
Sbjct: 15 VRVATVLNEKGLDFEIVPVDLTTGAH 40
>d1fw1a2 c.47.1.5 (A:5-87) Class zeta GST {Human (Homo sapiens)
[TaxId: 9606]}
Length = 83
Score = 22.3 bits (47), Expect = 6.6
Identities = 12/37 (32%), Positives = 18/37 (48%), Gaps = 3/37 (8%)
Query: 22 QRVLMILDSKNIDYTVI---DITEPGKENEKEFMQQN 55
RV + L K IDY + I + G++ K+F N
Sbjct: 14 WRVRIALALKGIDYKTVPINLIKDGGQQFSKDFQALN 50
>d1x6oa2 b.40.4.5 (A:87-165) C-terminal domain of eukaryotic
initiation translation factor 5a (eIF5a) {Leishmania
infantum [TaxId: 5671]}
Length = 79
Score = 22.4 bits (48), Expect = 6.7
Identities = 5/22 (22%), Positives = 9/22 (40%)
Query: 31 KNIDYTVIDITEPGKENEKEFM 52
K Y+V+DI + +
Sbjct: 2 KTYTYSVLDIQANEDPSLPAHL 23
>d1b48a2 c.47.1.5 (A:2-79) Class alpha GST {Mouse (Mus musculus),
(a1-4) [TaxId: 10090]}
Length = 78
Score = 22.3 bits (47), Expect = 6.7
Identities = 2/36 (5%), Positives = 13/36 (36%)
Query: 20 RQQRVLMILDSKNIDYTVIDITEPGKENEKEFMQQN 55
R + + +L + +++ + + + +
Sbjct: 14 RMESIRWLLAAAGVEFEEEFLETREQYEKMQKDGHL 49
>d1tdja2 d.58.18.2 (A:336-423) Allosteric threonine deaminase
C-terminal domain {Escherichia coli [TaxId: 562]}
Length = 88
Score = 22.0 bits (47), Expect = 8.9
Identities = 6/30 (20%), Positives = 18/30 (60%)
Query: 13 GVKGVKKRQQRVLMILDSKNIDYTVIDITE 42
GV+ + ++R ++ + Y+V+D+++
Sbjct: 47 GVRLSRGLEERKEILQMLNDGGYSVVDLSD 76
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.312 0.132 0.370
Gapped
Lambda K H
0.267 0.0429 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 303,547
Number of extensions: 10890
Number of successful extensions: 49
Number of sequences better than 10.0: 1
Number of HSP's gapped: 49
Number of HSP's successfully gapped: 29
Length of query: 86
Length of database: 2,407,596
Length adjustment: 51
Effective length of query: 35
Effective length of database: 1,707,366
Effective search space: 59757810
Effective search space used: 59757810
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 47 (22.6 bits)