BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3970
(104 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|339773549|gb|AEK05181.1| methyl-binding protein [Schistocerca gregaria]
Length = 182
Score = 100 bits (250), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 65/97 (67%), Gaps = 1/97 (1%)
Query: 9 SLVSNLLKMLPTKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
++ + M K++YEC LP GW REEV R GLS GKVDV+YYSP GKK R++ ++
Sbjct: 11 DVIGDTRTMALEKRKYECSALPKGWQREEVIRKSGLSAGKVDVYYYSPNGKKFRSKPQLA 70
Query: 69 QVIRGNIPGVSFDFRSGKLNSLQKHRN-KQRGNQFEY 104
+ + + +FDFRSGK+NSL +N KQRG QF+Y
Sbjct: 71 RYLGDALDLATFDFRSGKINSLLLRKNKKQRGTQFDY 107
>gi|241616494|ref|XP_002407962.1| methyl-CpG binding transcription regulator, putative [Ixodes
scapularis]
gi|215502882|gb|EEC12376.1| methyl-CpG binding transcription regulator, putative [Ixodes
scapularis]
Length = 258
Score = 92.0 bits (227), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP LP GW REEV R GLS GKVDV+YYSP GKK R++ ++ + + I +FDFR+
Sbjct: 15 DCPALPKGWKREEVIRRTGLSAGKVDVYYYSPGGKKFRSKPQLARFLGDAIDLSTFDFRT 74
Query: 85 GKLNSLQKHRN-KQRGNQFEY 104
GK+NSL ++ +QRG QF+Y
Sbjct: 75 GKINSLLLRKSRRQRGTQFDY 95
>gi|427787647|gb|JAA59275.1| Putative methyl-cpg binding transcription regulator [Rhipicephalus
pulchellus]
Length = 251
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP LP GW REEV R GLS GKVDV+YYSP GKK R++ ++ + + I +FDFR+
Sbjct: 8 DCPALPKGWRREEVIRRGGLSAGKVDVYYYSPGGKKFRSKPQLARFLGDAIDLSTFDFRT 67
Query: 85 GKLNSLQKHRN-KQRGNQFEY 104
GK+NSL ++ +QRG QF+Y
Sbjct: 68 GKINSLLLRKSRRQRGTQFDY 88
>gi|346472001|gb|AEO35845.1| hypothetical protein [Amblyomma maculatum]
Length = 248
Score = 91.7 bits (226), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/81 (53%), Positives = 58/81 (71%), Gaps = 1/81 (1%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
ECP LP GW REEV R GLS GKVDV+YYSP GKK R++ ++ + + + +FDFR+
Sbjct: 5 ECPALPKGWRREEVIRRGGLSAGKVDVYYYSPGGKKFRSKPQLARFLGDALDLSTFDFRT 64
Query: 85 GKLNSLQKHRN-KQRGNQFEY 104
GK+NSL ++ +QRG QF+Y
Sbjct: 65 GKINSLLLRKSRRQRGTQFDY 85
>gi|115644418|ref|XP_792656.2| PREDICTED: methyl-CpG-binding domain protein 2-like
[Strongylocentrotus purpuratus]
gi|192759055|gb|ACF05485.1| methyl-CpG-binding domain type 2/3 [Hemicentrotus pulcherrimus]
Length = 274
Score = 88.6 bits (218), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 3/101 (2%)
Query: 7 PLSLVSNL--LKMLPTKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTR 64
P+ L N+ + + TK +CP LP GW REEV R GLS GK DV+YYSPCGKKLR++
Sbjct: 3 PMDLPENMDCEERIDTKGLQDCPGLPAGWKREEVIRKSGLSAGKTDVYYYSPCGKKLRSK 62
Query: 65 SEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQRGN-QFEY 104
++ + I I +FDFR+GKL S ++K+ N F+Y
Sbjct: 63 PQLARFIGDAIDLSAFDFRTGKLLSSGVRKSKRLKNIHFDY 103
>gi|73987325|ref|XP_868594.1| PREDICTED: methyl-CpG-binding domain protein 3 isoform 5 [Canis
lupus familiaris]
Length = 291
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 56/78 (71%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
+KR+ECP LP GW REEV R GLS G DVFYYSP GKK R++ ++ + + G++ +F
Sbjct: 3 RKRWECPALPQGWEREEVPRRSGLSAGHRDVFYYSPSGKKFRSKPQLARYLGGSMDLSTF 62
Query: 81 DFRSGKLNSLQKHRNKQR 98
DFR+GK+ + +R++QR
Sbjct: 63 DFRTGKMLMSKMNRSRQR 80
>gi|380798437|gb|AFE71094.1| methyl-CpG-binding domain protein 2 isoform 1, partial [Macaca
mulatta]
Length = 276
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 22 KRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFD 81
KR +CP LPPGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + SFD
Sbjct: 13 KRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFD 72
Query: 82 FRSGKLNSLQKHRNKQR 98
FR+GK+ + +NKQR
Sbjct: 73 FRTGKMMPSKLQKNKQR 89
>gi|403268200|ref|XP_003926168.1| PREDICTED: methyl-CpG-binding domain protein 2, partial [Saimiri
boliviensis boliviensis]
Length = 283
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 22 KRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFD 81
KR +CP LPPGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + SFD
Sbjct: 20 KRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFD 79
Query: 82 FRSGKLNSLQKHRNKQR 98
FR+GK+ + +NKQR
Sbjct: 80 FRTGKMMPSKLQKNKQR 96
>gi|301757743|ref|XP_002914722.1| PREDICTED: methyl-CpG-binding domain protein 2-like [Ailuropoda
melanoleuca]
Length = 330
Score = 87.8 bits (216), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 22 KRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFD 81
KR +CP LPPGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + SFD
Sbjct: 66 KRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFD 125
Query: 82 FRSGKLNSLQKHRNKQR 98
FR+GK+ + +NKQR
Sbjct: 126 FRTGKMMPSKLQKNKQR 142
>gi|281351227|gb|EFB26811.1| hypothetical protein PANDA_002637 [Ailuropoda melanoleuca]
Length = 287
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 22 KRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFD 81
KR +CP LPPGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + SFD
Sbjct: 23 KRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFD 82
Query: 82 FRSGKLNSLQKHRNKQR 98
FR+GK+ + +NKQR
Sbjct: 83 FRTGKMMPSKLQKNKQR 99
>gi|296222685|ref|XP_002757298.1| PREDICTED: methyl-CpG-binding domain protein 2, partial [Callithrix
jacchus]
Length = 299
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/77 (50%), Positives = 54/77 (70%)
Query: 22 KRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFD 81
KR +CP LPPGW +EEV R GLSVGK DV+Y+SP GKK R++ ++ + + + SFD
Sbjct: 36 KRMDCPALPPGWKKEEVIRKFGLSVGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFD 95
Query: 82 FRSGKLNSLQKHRNKQR 98
FR+GK+ + +NKQR
Sbjct: 96 FRTGKMMPSKLQKNKQR 112
>gi|291394391|ref|XP_002713528.1| PREDICTED: methyl-CpG binding domain protein 2 [Oryctolagus
cuniculus]
Length = 310
Score = 87.8 bits (216), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 22 KRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFD 81
KR +CP LPPGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + SFD
Sbjct: 47 KRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFD 106
Query: 82 FRSGKLNSLQKHRNKQR 98
FR+GK+ + +NKQR
Sbjct: 107 FRTGKMMPSKLQKNKQR 123
>gi|348505486|ref|XP_003440292.1| PREDICTED: methyl-CpG-binding domain protein 2-like [Oreochromis
niloticus]
Length = 265
Score = 87.4 bits (215), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 53/78 (67%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
+KR +CP LPPGW +EEV R GLS GK DV+YYSP GKK R++ ++ + + + F
Sbjct: 3 RKRTDCPALPPGWKKEEVIRKSGLSAGKSDVYYYSPSGKKFRSKPQLSRYLGNTVDLACF 62
Query: 81 DFRSGKLNSLQKHRNKQR 98
DFR+GK+ + +NKQR
Sbjct: 63 DFRTGKMMPGKLQKNKQR 80
>gi|426386009|ref|XP_004059488.1| PREDICTED: methyl-CpG-binding domain protein 2 [Gorilla gorilla
gorilla]
Length = 411
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 22 KRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFD 81
KR +CP LPPGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + SFD
Sbjct: 148 KRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFD 207
Query: 82 FRSGKLNSLQKHRNKQR 98
FR+GK+ + +NKQR
Sbjct: 208 FRTGKMMPSKLQKNKQR 224
>gi|4505117|ref|NP_003918.1| methyl-CpG-binding domain protein 2 isoform 1 [Homo sapiens]
gi|50401198|sp|Q9UBB5.1|MBD2_HUMAN RecName: Full=Methyl-CpG-binding domain protein 2; AltName:
Full=Demethylase; Short=DMTase; AltName:
Full=Methyl-CpG-binding protein MBD2
gi|3800793|gb|AAC68871.1| methyl-CpG binding protein MBD2 [Homo sapiens]
gi|5929756|gb|AAD56597.1| methyl-CpG binding protein 2 [Homo sapiens]
gi|21595776|gb|AAH32638.1| Methyl-CpG binding domain protein 2 [Homo sapiens]
gi|119583401|gb|EAW62997.1| methyl-CpG binding domain protein 2, isoform CRA_a [Homo sapiens]
Length = 411
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 22 KRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFD 81
KR +CP LPPGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + SFD
Sbjct: 148 KRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFD 207
Query: 82 FRSGKLNSLQKHRNKQR 98
FR+GK+ + +NKQR
Sbjct: 208 FRTGKMMPSKLQKNKQR 224
>gi|402903150|ref|XP_003914441.1| PREDICTED: methyl-CpG-binding domain protein 2 [Papio anubis]
Length = 412
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 22 KRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFD 81
KR +CP LPPGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + SFD
Sbjct: 149 KRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFD 208
Query: 82 FRSGKLNSLQKHRNKQR 98
FR+GK+ + +NKQR
Sbjct: 209 FRTGKMMPSKLQKNKQR 225
>gi|109122247|ref|XP_001082249.1| PREDICTED: methyl-CpG-binding domain protein 2 [Macaca mulatta]
Length = 412
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 22 KRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFD 81
KR +CP LPPGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + SFD
Sbjct: 149 KRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFD 208
Query: 82 FRSGKLNSLQKHRNKQR 98
FR+GK+ + +NKQR
Sbjct: 209 FRTGKMMPSKLQKNKQR 225
>gi|344269858|ref|XP_003406764.1| PREDICTED: methyl-CpG-binding domain protein 2-like [Loxodonta
africana]
Length = 348
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 22 KRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFD 81
KR +CP LPPGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + SFD
Sbjct: 85 KRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFD 144
Query: 82 FRSGKLNSLQKHRNKQR 98
FR+GK+ + +NKQR
Sbjct: 145 FRTGKMMPSKLQKNKQR 161
>gi|194214687|ref|XP_001499825.2| PREDICTED: methyl-CpG-binding domain protein 2-like [Equus
caballus]
Length = 337
Score = 87.0 bits (214), Expect = 1e-15, Method: Composition-based stats.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 22 KRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFD 81
KR +CP LPPGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + SFD
Sbjct: 74 KRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFD 133
Query: 82 FRSGKLNSLQKHRNKQR 98
FR+GK+ + +NKQR
Sbjct: 134 FRTGKMMPSKLQKNKQR 150
>gi|397514153|ref|XP_003827361.1| PREDICTED: methyl-CpG-binding domain protein 2 [Pan paniscus]
Length = 376
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 22 KRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFD 81
KR +CP LPPGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + SFD
Sbjct: 113 KRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFD 172
Query: 82 FRSGKLNSLQKHRNKQR 98
FR+GK+ + +NKQR
Sbjct: 173 FRTGKMMPSKLQKNKQR 189
>gi|126320765|ref|XP_001362190.1| PREDICTED: methyl-CpG-binding domain protein 2-like [Monodelphis
domestica]
Length = 416
Score = 87.0 bits (214), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 22 KRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFD 81
KR +CP LPPGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + SFD
Sbjct: 153 KRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFD 212
Query: 82 FRSGKLNSLQKHRNKQR 98
FR+GK+ + +NKQR
Sbjct: 213 FRTGKMMPSKLQKNKQR 229
>gi|126323490|ref|XP_001363695.1| PREDICTED: methyl-CpG-binding domain protein 3-like [Monodelphis
domestica]
Length = 289
Score = 86.7 bits (213), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 56/78 (71%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
+KR+EC LP GW REEVTR GLS GK DV+YYSP GKK R++ ++ + + ++ +F
Sbjct: 3 RKRWECSALPQGWKREEVTRKSGLSAGKSDVYYYSPSGKKFRSKPQLARYLGSSMDLSTF 62
Query: 81 DFRSGKLNSLQKHRNKQR 98
DFR+GK+ + ++N+QR
Sbjct: 63 DFRTGKMLMSKMNKNRQR 80
>gi|432950889|ref|XP_004084660.1| PREDICTED: methyl-CpG-binding domain protein 2-like [Oryzias
latipes]
Length = 261
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
+K+ +CP LPPGW +EEV R GLS GK DV+YYSP GKK R++ ++ + + + F
Sbjct: 4 RKKADCPALPPGWKKEEVIRKSGLSAGKSDVYYYSPTGKKFRSKPQLARYLGNTVDLACF 63
Query: 81 DFRSGKLNSLQKHRNKQR 98
DFR+GK+ + +NKQR
Sbjct: 64 DFRTGKMMPGKLQKNKQR 81
>gi|3800795|gb|AAC68872.1| methyl-CpG binding protein MBD2 [Mus musculus]
gi|5739188|gb|AAD50372.1| methyl-CpG binding protein 2 [Mus musculus]
gi|37572285|gb|AAH46607.2| Methyl-CpG binding domain protein 2 [Mus musculus]
gi|148677619|gb|EDL09566.1| methyl-CpG binding domain protein 2, isoform CRA_b [Mus musculus]
Length = 414
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 22 KRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFD 81
KR +CP LPPGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + SFD
Sbjct: 151 KRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNAVDLSSFD 210
Query: 82 FRSGKLNSLQKHRNKQR 98
FR+GK+ + +NKQR
Sbjct: 211 FRTGKMMPSKLQKNKQR 227
>gi|218931229|ref|NP_034903.2| methyl-CpG-binding domain protein 2 [Mus musculus]
gi|341940941|sp|Q9Z2E1.2|MBD2_MOUSE RecName: Full=Methyl-CpG-binding domain protein 2; AltName:
Full=Methyl-CpG-binding protein MBD2
Length = 414
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 22 KRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFD 81
KR +CP LPPGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + SFD
Sbjct: 151 KRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNAVDLSSFD 210
Query: 82 FRSGKLNSLQKHRNKQR 98
FR+GK+ + +NKQR
Sbjct: 211 FRTGKMMPSKLQKNKQR 227
>gi|169234846|ref|NP_001108497.1| methyl-CpG-binding domain protein 2 [Rattus norvegicus]
gi|165970773|gb|AAI58878.1| Mbd2 protein [Rattus norvegicus]
Length = 412
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 22 KRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFD 81
KR +CP LPPGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + SFD
Sbjct: 149 KRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNAVDLSSFD 208
Query: 82 FRSGKLNSLQKHRNKQR 98
FR+GK+ + +NKQR
Sbjct: 209 FRTGKMMPSKLQKNKQR 225
>gi|395830852|ref|XP_003788528.1| PREDICTED: methyl-CpG-binding domain protein 2 [Otolemur garnettii]
Length = 405
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 22 KRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFD 81
KR +CP LPPGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + SFD
Sbjct: 142 KRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFD 201
Query: 82 FRSGKLNSLQKHRNKQR 98
FR+GK+ + +NKQR
Sbjct: 202 FRTGKMMPSKLQKNKQR 218
>gi|335282297|ref|XP_003354028.1| PREDICTED: methyl-CpG-binding domain protein 3-like isoform 2
[Sus scrofa]
Length = 291
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 56/78 (71%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
+KR+ECP LP GW REEV R GLS G DVFYYSP GKK R++ ++ + + G++ +F
Sbjct: 3 RKRWECPALPQGWEREEVPRRSGLSAGHRDVFYYSPSGKKFRSKPQLARYLGGSMDLSTF 62
Query: 81 DFRSGKLNSLQKHRNKQR 98
DFR+GK+ + ++++QR
Sbjct: 63 DFRTGKMLMSKMNKSRQR 80
>gi|148223675|ref|NP_001083787.1| methyl-CpG binding domain protein 2 [Xenopus laevis]
gi|24898897|dbj|BAC23079.1| methyl-CpG binding protein MBD2 [Xenopus laevis]
Length = 267
Score = 86.7 bits (213), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 54/78 (69%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
K+R ECP LP GW +EEV R GLS GK DV+YYSP GKK R++ ++ + + ++ SF
Sbjct: 3 KRRLECPALPAGWKKEEVIRKSGLSAGKSDVYYYSPNGKKFRSKPQLARYLGNSVDLNSF 62
Query: 81 DFRSGKLNSLQKHRNKQR 98
DFR+GK+ + +NKQR
Sbjct: 63 DFRTGKMMPSKLQKNKQR 80
>gi|4505119|ref|NP_003917.1| methyl-CpG-binding domain protein 3 [Homo sapiens]
gi|55647849|ref|XP_512241.1| PREDICTED: methyl-CpG-binding domain protein 3 isoform 2 [Pan
troglodytes]
gi|50400820|sp|O95983.1|MBD3_HUMAN RecName: Full=Methyl-CpG-binding domain protein 3; AltName:
Full=Methyl-CpG-binding protein MBD3
gi|3800803|gb|AAC68876.1| methyl-CpG binding domain-containing protein MBD3 [Homo sapiens]
gi|3850564|gb|AAC72104.1| methyl-CpG binding protein MBD3 [Homo sapiens]
gi|119589883|gb|EAW69477.1| methyl-CpG binding domain protein 3, isoform CRA_a [Homo sapiens]
gi|119589884|gb|EAW69478.1| methyl-CpG binding domain protein 3, isoform CRA_a [Homo sapiens]
gi|119589887|gb|EAW69481.1| methyl-CpG binding domain protein 3, isoform CRA_a [Homo sapiens]
gi|158255200|dbj|BAF83571.1| unnamed protein product [Homo sapiens]
gi|261860518|dbj|BAI46781.1| methyl-CpG binding domain protein 3 [synthetic construct]
gi|410219894|gb|JAA07166.1| methyl-CpG binding domain protein 3 [Pan troglodytes]
gi|410303042|gb|JAA30121.1| methyl-CpG binding domain protein 3 [Pan troglodytes]
gi|410335731|gb|JAA36812.1| methyl-CpG binding domain protein 3 [Pan troglodytes]
gi|410335733|gb|JAA36813.1| methyl-CpG binding domain protein 3 [Pan troglodytes]
Length = 291
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 56/78 (71%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
+KR+ECP LP GW REEV R GLS G DVFYYSP GKK R++ ++ + + G++ +F
Sbjct: 3 RKRWECPALPQGWEREEVPRRSGLSAGHRDVFYYSPSGKKFRSKPQLARYLGGSMDLSTF 62
Query: 81 DFRSGKLNSLQKHRNKQR 98
DFR+GK+ + ++++QR
Sbjct: 63 DFRTGKMLMSKMNKSRQR 80
>gi|302563677|ref|NP_001180972.1| methyl-CpG-binding domain protein 3 [Macaca mulatta]
gi|402903577|ref|XP_003914640.1| PREDICTED: methyl-CpG-binding domain protein 3 [Papio anubis]
gi|383414137|gb|AFH30282.1| methyl-CpG-binding domain protein 3 [Macaca mulatta]
gi|387540270|gb|AFJ70762.1| methyl-CpG-binding domain protein 3 [Macaca mulatta]
Length = 291
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 56/78 (71%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
+KR+ECP LP GW REEV R GLS G DVFYYSP GKK R++ ++ + + G++ +F
Sbjct: 3 RKRWECPALPQGWEREEVPRRSGLSAGHRDVFYYSPSGKKFRSKPQLARYLGGSMDLSTF 62
Query: 81 DFRSGKLNSLQKHRNKQR 98
DFR+GK+ + ++++QR
Sbjct: 63 DFRTGKMLMSKMNKSRQR 80
>gi|157818023|ref|NP_001102205.1| methyl-CpG-binding domain protein 3 [Rattus norvegicus]
gi|149034542|gb|EDL89279.1| methyl-CpG binding domain protein 3 (predicted), isoform CRA_a
[Rattus norvegicus]
gi|149034543|gb|EDL89280.1| methyl-CpG binding domain protein 3 (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 286
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
+KR+ECP LP GW REEV R GLS G DVFYYSP GKK R++ ++ + + G++ +F
Sbjct: 3 RKRWECPALPQGWEREEVPRRSGLSAGHRDVFYYSPSGKKFRSKPQLARYLGGSMDLSTF 62
Query: 81 DFRSGK--LNSLQKHRNKQR 98
DFR+GK +N + K R + R
Sbjct: 63 DFRTGKMLMNKMNKSRQRVR 82
>gi|7305261|ref|NP_038623.1| methyl-CpG-binding domain protein 3 [Mus musculus]
gi|50401209|sp|Q9Z2D8.1|MBD3_MOUSE RecName: Full=Methyl-CpG-binding domain protein 3; AltName:
Full=Methyl-CpG-binding protein MBD3
gi|5731992|gb|AAD48909.1|AF120995_1 methyl-CpG binding domain-containing protein 3 [Mus musculus
domesticus]
gi|3800805|gb|AAC68877.1| methyl-CpG binding domain-containing protein MBD3 [Mus musculus]
gi|148699603|gb|EDL31550.1| methyl-CpG binding domain protein 3, isoform CRA_c [Mus musculus]
gi|148699604|gb|EDL31551.1| methyl-CpG binding domain protein 3, isoform CRA_c [Mus musculus]
Length = 285
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
+KR+ECP LP GW REEV R GLS G DVFYYSP GKK R++ ++ + + G++ +F
Sbjct: 3 RKRWECPALPQGWEREEVPRRSGLSAGHRDVFYYSPSGKKFRSKPQLARYLGGSMDLSTF 62
Query: 81 DFRSGK--LNSLQKHRNKQR 98
DFR+GK +N + K R + R
Sbjct: 63 DFRTGKMLMNKMNKSRQRVR 82
>gi|149064588|gb|EDM14791.1| rCG46680, isoform CRA_b [Rattus norvegicus]
Length = 447
Score = 86.3 bits (212), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 22 KRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFD 81
KR +CP LPPGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + SFD
Sbjct: 184 KRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNAVDLSSFD 243
Query: 82 FRSGKLNSLQKHRNKQR 98
FR+GK+ + +NKQR
Sbjct: 244 FRTGKMMPSKLQKNKQR 260
>gi|441656563|ref|XP_003277102.2| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein
3 [Nomascus leucogenys]
Length = 298
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 56/78 (71%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
+KR+ECP LP GW REEV R GLS G DVFYYSP GKK R++ ++ + + G++ +F
Sbjct: 3 RKRWECPALPQGWEREEVPRRSGLSAGHRDVFYYSPSGKKFRSKPQLARYLGGSMDLSTF 62
Query: 81 DFRSGKLNSLQKHRNKQR 98
DFR+GK+ + ++++QR
Sbjct: 63 DFRTGKMLMSKMNKSRQR 80
>gi|410052700|ref|XP_512139.4| PREDICTED: methyl-CpG-binding domain protein 2 isoform 3 [Pan
troglodytes]
Length = 487
Score = 85.9 bits (211), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/77 (49%), Positives = 53/77 (68%)
Query: 22 KRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFD 81
KR +CP LPPGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + SFD
Sbjct: 224 KRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFD 283
Query: 82 FRSGKLNSLQKHRNKQR 98
FR+GK+ + +NKQR
Sbjct: 284 FRTGKMMPSKLQKNKQR 300
>gi|348550421|ref|XP_003461030.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein
3-like [Cavia porcellus]
Length = 367
Score = 85.9 bits (211), Expect = 3e-15, Method: Composition-based stats.
Identities = 38/78 (48%), Positives = 56/78 (71%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
+KR+ECP LP GW REEV R GLS G DVFYYSP GKK R++ ++ + + G++ +F
Sbjct: 80 RKRWECPALPQGWEREEVPRRSGLSAGHRDVFYYSPSGKKFRSKPQLARYLGGSMDLSTF 139
Query: 81 DFRSGKLNSLQKHRNKQR 98
DFR+GK+ + ++++QR
Sbjct: 140 DFRTGKMLMSKMNKSRQR 157
>gi|24210495|dbj|BAC22082.1| methyl-CpG binding protein MBD3 [Xenopus laevis]
Length = 283
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 56/78 (71%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
KKR+EC LP GW +EEVTR GLS GK DV+YYSP GKK R++ ++ + + ++ +F
Sbjct: 3 KKRWECSALPQGWKKEEVTRRSGLSAGKSDVYYYSPSGKKFRSKPQLARYLGNSMDLSTF 62
Query: 81 DFRSGKLNSLQKHRNKQR 98
DFR+GK+ + ++N+QR
Sbjct: 63 DFRTGKMLMSKINKNRQR 80
>gi|149034544|gb|EDL89281.1| methyl-CpG binding domain protein 3 (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 157
Score = 85.5 bits (210), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/80 (50%), Positives = 55/80 (68%), Gaps = 2/80 (2%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
+KR+ECP LP GW REEV R GLS G DVFYYSP GKK R++ ++ + + G++ +F
Sbjct: 3 RKRWECPALPQGWEREEVPRRSGLSAGHRDVFYYSPSGKKFRSKPQLARYLGGSMDLSTF 62
Query: 81 DFRSGK--LNSLQKHRNKQR 98
DFR+GK +N + K R + R
Sbjct: 63 DFRTGKMLMNKMNKSRQRVR 82
>gi|7710145|ref|NP_056647.1| methyl-CpG-binding domain protein 2 testis-specific isoform [Homo
sapiens]
gi|5929755|gb|AAD56596.1| testis-specific methyl-CpG binding protein 2 [Homo sapiens]
gi|119583402|gb|EAW62998.1| methyl-CpG binding domain protein 2, isoform CRA_b [Homo sapiens]
gi|119583403|gb|EAW62999.1| methyl-CpG binding domain protein 2, isoform CRA_b [Homo sapiens]
Length = 302
Score = 85.5 bits (210), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 54/79 (68%)
Query: 20 TKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVS 79
+ KR +CP LPPGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + S
Sbjct: 146 SGKRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSS 205
Query: 80 FDFRSGKLNSLQKHRNKQR 98
FDFR+GK+ + +NKQR
Sbjct: 206 FDFRTGKMMPSKLQKNKQR 224
>gi|3800799|gb|AAC68874.1| testis specific methyl-CpG binding protein MBD2 [Mus musculus]
gi|5739189|gb|AAD50373.1| testis-specific methyl-CpG binding protein 2 [Mus musculus]
gi|148677618|gb|EDL09565.1| methyl-CpG binding domain protein 2, isoform CRA_a [Mus musculus]
Length = 249
Score = 85.1 bits (209), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 54/79 (68%)
Query: 20 TKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVS 79
+ KR +CP LPPGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + S
Sbjct: 149 SGKRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNAVDLSS 208
Query: 80 FDFRSGKLNSLQKHRNKQR 98
FDFR+GK+ + +NKQR
Sbjct: 209 FDFRTGKMMPSKLQKNKQR 227
>gi|149064587|gb|EDM14790.1| rCG46680, isoform CRA_a [Rattus norvegicus]
Length = 278
Score = 84.7 bits (208), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 54/79 (68%)
Query: 20 TKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVS 79
+ KR +CP LPPGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + S
Sbjct: 182 SGKRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNAVDLSS 241
Query: 80 FDFRSGKLNSLQKHRNKQR 98
FDFR+GK+ + +NKQR
Sbjct: 242 FDFRTGKMMPSKLQKNKQR 260
>gi|431896183|gb|ELK05599.1| Methyl-CpG-binding domain protein 2 [Pteropus alecto]
Length = 262
Score = 84.3 bits (207), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 51/74 (68%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP LPPGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + SFDFR+
Sbjct: 2 DCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFDFRT 61
Query: 85 GKLNSLQKHRNKQR 98
GK+ + +NKQR
Sbjct: 62 GKMMPSKLQKNKQR 75
>gi|47086513|ref|NP_997933.1| methyl-CpG-binding domain protein 2 [Danio rerio]
gi|29692019|gb|AAO91661.1| methyl-CpG binding protein 2 [Danio rerio]
gi|62204526|gb|AAH93117.1| Mbd2 protein [Danio rerio]
gi|157422758|gb|AAI53556.1| Methyl-CpG binding domain protein 2 [Danio rerio]
gi|182888962|gb|AAI64452.1| Mbd2 protein [Danio rerio]
Length = 256
Score = 84.3 bits (207), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 53/78 (67%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
KKR +CP LPPGW +EEV R GLS GK DV+YYSP GKK R++ ++ + + + F
Sbjct: 3 KKRTDCPALPPGWKKEEVIRKSGLSAGKSDVYYYSPKGKKFRSKPQLSRYLGNTVDLGCF 62
Query: 81 DFRSGKLNSLQKHRNKQR 98
DFR+GK+ + ++KQR
Sbjct: 63 DFRTGKMMPGKMQKSKQR 80
>gi|410903269|ref|XP_003965116.1| PREDICTED: methyl-CpG-binding domain protein 2-like [Takifugu
rubripes]
Length = 265
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
+K+ +CP LPPGW +EEV R GLS GK DV+YYSP GKK R++ ++ + + + F
Sbjct: 3 RKKSDCPALPPGWKKEEVIRKSGLSAGKSDVYYYSPSGKKFRSKPQLSRYLGNAVDLGCF 62
Query: 81 DFRSGKLNSLQKHRNKQR 98
DFR+GK+ + +NKQR
Sbjct: 63 DFRTGKMMPGKLQKNKQR 80
>gi|47939475|gb|AAH71531.1| Methyl-CpG binding domain protein 3a [Danio rerio]
Length = 273
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 56/78 (71%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
+KR+EC LP GW EEVTR GLS GK DV+Y+SP GKK R++ ++++ + ++ SF
Sbjct: 3 RKRWECSALPNGWKMEEVTRKSGLSAGKSDVYYFSPTGKKFRSKPQLVRYLGKSMDLSSF 62
Query: 81 DFRSGKLNSLQKHRNKQR 98
DFR+GK+ + ++N+QR
Sbjct: 63 DFRTGKMLMSKLNKNRQR 80
>gi|47086507|ref|NP_997934.1| methyl-CpG-binding domain protein 3 [Danio rerio]
gi|37681869|gb|AAQ97812.1| methyl-CpG binding domain protein 3 [Danio rerio]
Length = 273
Score = 83.6 bits (205), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 56/78 (71%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
+KR+EC LP GW EEVTR GLS GK DV+Y+SP GKK R++ ++++ + ++ SF
Sbjct: 3 RKRWECSALPNGWKMEEVTRKSGLSAGKSDVYYFSPTGKKFRSKPQLVRYLGKSMDLSSF 62
Query: 81 DFRSGKLNSLQKHRNKQR 98
DFR+GK+ + ++N+QR
Sbjct: 63 DFRTGKMLMSKLNKNRQR 80
>gi|395831632|ref|XP_003788899.1| PREDICTED: methyl-CpG-binding domain protein 3 [Otolemur garnettii]
Length = 325
Score = 83.6 bits (205), Expect = 1e-14, Method: Composition-based stats.
Identities = 38/83 (45%), Positives = 56/83 (67%)
Query: 16 KMLPTKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNI 75
++L T R CP LP GW REEV R GLS G DVFYYSP GKK R++ ++ + + G++
Sbjct: 35 RVLKTPARERCPALPQGWEREEVPRRSGLSAGHRDVFYYSPSGKKFRSKPQLARYLGGSM 94
Query: 76 PGVSFDFRSGKLNSLQKHRNKQR 98
+FDFR+GK+ + ++++QR
Sbjct: 95 DLSTFDFRTGKMLMSKMNKSRQR 117
>gi|47210325|emb|CAF91173.1| unnamed protein product [Tetraodon nigroviridis]
Length = 290
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/78 (46%), Positives = 53/78 (67%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
+K+ +CP LPPGW +EEV R GLS GK DV+YYSP GKK R++ ++ + + + F
Sbjct: 3 RKKTDCPALPPGWKKEEVIRKSGLSAGKSDVYYYSPSGKKFRSKPQLSRYLGNAVDLACF 62
Query: 81 DFRSGKLNSLQKHRNKQR 98
DFR+GK+ + ++KQR
Sbjct: 63 DFRTGKMMPGKLQKSKQR 80
>gi|357610614|gb|EHJ67065.1| putative methyl-CpG binding transcription regulator [Danaus
plexippus]
Length = 251
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 58/85 (68%), Gaps = 1/85 (1%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
KK+ +C LP GW REEV R GLS GKVDV+YYSP GKK R++SE+++ + ++ F
Sbjct: 7 KKKSDCDALPKGWQREEVVRKTGLSAGKVDVYYYSPTGKKCRSKSELVRYLGDSVNLSYF 66
Query: 81 DFRSGKLNSLQKHR-NKQRGNQFEY 104
D++ G+LN++ + KQ Q+EY
Sbjct: 67 DYQQGQLNTMLLCKVKKQARAQYEY 91
>gi|260829803|ref|XP_002609851.1| hypothetical protein BRAFLDRAFT_126023 [Branchiostoma floridae]
gi|229295213|gb|EEN65861.1| hypothetical protein BRAFLDRAFT_126023 [Branchiostoma floridae]
Length = 298
Score = 83.2 bits (204), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 53/77 (68%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
++R +CP LP GW REEVTR GLS GK DV+YYSP GKK R++ ++ + + F
Sbjct: 3 RRRMDCPALPKGWKREEVTRKSGLSAGKSDVYYYSPSGKKFRSKPQLARYLGDTFDLSCF 62
Query: 81 DFRSGKLNSLQKHRNKQ 97
DFR+GK+ S + ++NK+
Sbjct: 63 DFRTGKMLSSKVNKNKK 79
>gi|60097955|ref|NP_001012403.1| methyl-CpG-binding domain protein 2 [Gallus gallus]
gi|58450101|gb|AAW78400.1| methyl-CpG-binding domain protein 2 [Gallus gallus]
Length = 257
Score = 82.8 bits (203), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 51/76 (67%)
Query: 23 RYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDF 82
R +CP LPPGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + FDF
Sbjct: 6 RTDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNAVDLSCFDF 65
Query: 83 RSGKLNSLQKHRNKQR 98
R+GK+ + +NKQR
Sbjct: 66 RTGKMMPSKLQKNKQR 81
>gi|47215634|emb|CAG01351.1| unnamed protein product [Tetraodon nigroviridis]
Length = 261
Score = 82.8 bits (203), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 54/78 (69%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
KKR++C LP GW EEVTR GLS GK DV+Y+SP GKK R++ ++ + + + SF
Sbjct: 3 KKRWDCTALPKGWKMEEVTRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNQMDLSSF 62
Query: 81 DFRSGKLNSLQKHRNKQR 98
DFR+GK+ + ++N+QR
Sbjct: 63 DFRTGKMLMSKLNKNRQR 80
>gi|321472364|gb|EFX83334.1| hypothetical protein DAPPUDRAFT_195138 [Daphnia pulex]
Length = 252
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 55/79 (69%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
+KR+EC LP GW REEV R GLS G D+FYYSP GKK R++ ++++ + + +F
Sbjct: 9 RKRFECNALPKGWTREEVIRKAGLSAGTKDIFYYSPNGKKFRSKPQLVRYLGDTVDLTTF 68
Query: 81 DFRSGKLNSLQKHRNKQRG 99
D+++GK+N++ +N+++
Sbjct: 69 DYKTGKINAILLRKNRKKA 87
>gi|432853519|ref|XP_004067747.1| PREDICTED: methyl-CpG-binding domain protein 3-like isoform 1
[Oryzias latipes]
Length = 274
Score = 82.4 bits (202), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 54/78 (69%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
KKR++C LP GW EEVTR GLS GK DV+Y+SP GKK R++ ++ + + + SF
Sbjct: 3 KKRWDCSALPKGWKMEEVTRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNQMDLSSF 62
Query: 81 DFRSGKLNSLQKHRNKQR 98
DFR+GK+ + ++N+QR
Sbjct: 63 DFRTGKMLMSKLNKNRQR 80
>gi|192759051|gb|ACF05483.1| methyl-CpG-binding domain type 2/3a [Patiria pectinifera]
Length = 268
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 48/70 (68%)
Query: 18 LPTKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPG 77
+ KK ECP LP GW +EEV R GLS GK D++Y+SPCG+K R++ ++ + + I
Sbjct: 1 MEKKKTEECPFLPKGWKKEEVIRKSGLSAGKTDIYYHSPCGRKFRSKPQLARFLGDAIDL 60
Query: 78 VSFDFRSGKL 87
SFDFR+GKL
Sbjct: 61 TSFDFRTGKL 70
>gi|192759053|gb|ACF05484.1| methyl-CpG-binding domain type 2/3b [Patiria pectinifera]
Length = 260
Score = 82.0 bits (201), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 35/70 (50%), Positives = 48/70 (68%)
Query: 18 LPTKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPG 77
+ KK ECP LP GW +EEV R GLS GK D++Y+SPCG+K R++ ++ + + I
Sbjct: 1 MEKKKTEECPFLPKGWKKEEVIRKSGLSAGKTDIYYHSPCGRKFRSKPQLARFLGDAIDL 60
Query: 78 VSFDFRSGKL 87
SFDFR+GKL
Sbjct: 61 TSFDFRTGKL 70
>gi|358418734|ref|XP_003584033.1| PREDICTED: methyl-CpG-binding domain protein 2 [Bos taurus]
Length = 149
Score = 81.6 bits (200), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 50/74 (67%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP LPPGW EEV R GLS GK DV+Y+SP GKK R++ ++ + + + SFDFR+
Sbjct: 2 DCPALPPGWKIEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFDFRT 61
Query: 85 GKLNSLQKHRNKQR 98
GK+ + +NKQR
Sbjct: 62 GKMMPSKLQKNKQR 75
>gi|29692025|gb|AAO91664.1| methyl-CpG binding protein 2/3 [Branchiostoma floridae]
Length = 326
Score = 79.7 bits (195), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 52/77 (67%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
++R +CP LP W REEVTR GLS GK DV+YYSP GKK R++ ++ + + F
Sbjct: 3 RRRMDCPALPKEWKREEVTRKSGLSAGKSDVYYYSPSGKKFRSKPQLARYLGDTFDLSCF 62
Query: 81 DFRSGKLNSLQKHRNKQ 97
DFR+GK+ S + ++NK+
Sbjct: 63 DFRTGKMLSSKVNKNKK 79
>gi|405967697|gb|EKC32831.1| Methyl-CpG-binding domain protein 2 [Crassostrea gigas]
Length = 248
Score = 79.3 bits (194), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
K+R +C LPPGW REEV R GLS GK DV+Y SP GKK+R++ ++ + + +F
Sbjct: 3 KRRLDCVGLPPGWKREEVVRKSGLSAGKTDVYYISPDGKKIRSKPQLARQLGEQFDLSAF 62
Query: 81 DFRSGKLNSLQKHRNKQRGNQFEY 104
DFRSG++N Q ++K+ +++
Sbjct: 63 DFRSGRINHSQLRKSKRPQGPYDF 86
>gi|5901737|gb|AAD55389.1|AF170346_1 methyl-CpG binding protein MBD3 [Xenopus laevis]
Length = 282
Score = 78.6 bits (192), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 55/78 (70%), Gaps = 1/78 (1%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
KKR+EC L GW +EEVTR GLS GK DV+YYSP GKK R++ ++ + + ++ +F
Sbjct: 3 KKRWECSALQ-GWKKEEVTRRSGLSAGKSDVYYYSPSGKKFRSKPQLARYLGNSMDLSTF 61
Query: 81 DFRSGKLNSLQKHRNKQR 98
DFR+GK+ + ++N+QR
Sbjct: 62 DFRTGKMLMSKINKNRQR 79
>gi|347971013|ref|XP_003436675.1| AGAP003982-PB [Anopheles gambiae str. PEST]
gi|333469591|gb|EGK97349.1| AGAP003982-PB [Anopheles gambiae str. PEST]
Length = 304
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 47/67 (70%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
+KR +C LP GW REEV R GLS GKVDV+YYSP GKK+ ++ ++ + + I +F
Sbjct: 7 RKRTDCAALPKGWQREEVLRKTGLSAGKVDVYYYSPTGKKIESKPQLARALGDTIDLSTF 66
Query: 81 DFRSGKL 87
D+++G++
Sbjct: 67 DYQAGRI 73
>gi|333360981|pdb|2KY8|A Chain A, Solution Structure And Dynamic Analysis Of Chicken Mbd2
Methyl Binding Domain Bound To A Target Methylated Dna
Sequence
Length = 72
Score = 75.9 bits (185), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 45/65 (69%)
Query: 23 RYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDF 82
R +CP LPPGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + FDF
Sbjct: 7 RTDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNAVDLSCFDF 66
Query: 83 RSGKL 87
R+GK+
Sbjct: 67 RTGKM 71
>gi|24210497|dbj|BAC22083.1| methyl-CpG binding protein MBD3 long form [Xenopus laevis]
gi|50414505|gb|AAH77740.1| MBD3 protein [Xenopus laevis]
Length = 302
Score = 73.9 bits (180), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 56/97 (57%), Gaps = 19/97 (19%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYS-------------------PCGKKL 61
KKR+EC LP GW +EEVTR GLS GK DV+YYS P GKK
Sbjct: 3 KKRWECSALPQGWKKEEVTRRSGLSAGKSDVYYYSSPSRYNRSLRDRVGCLNINPSGKKF 62
Query: 62 RTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
R++ ++ + + ++ +FDFR+GK+ + ++N+QR
Sbjct: 63 RSKPQLARYLGNSMDLSTFDFRTGKMLMSKINKNRQR 99
>gi|291223461|ref|XP_002731728.1| PREDICTED: methyl-CpG-binding domain type 2/3a-like [Saccoglossus
kowalevskii]
Length = 252
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 53/81 (65%), Gaps = 1/81 (1%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+C LP GW REEV R GLS GK DV+Y+SP GKK R++ ++ + + + +FDFR+
Sbjct: 8 DCSALPKGWKREEVIRKSGLSAGKSDVYYFSPNGKKFRSKPQLARFLGDSFDLSTFDFRT 67
Query: 85 GKLNSLQKHRNKQ-RGNQFEY 104
GK+++ ++K+ R ++Y
Sbjct: 68 GKISAASIRKSKRLRNVHYDY 88
>gi|349605676|gb|AEQ00832.1| Methyl-CpG-binding domain protein 2-like protein, partial [Equus
caballus]
Length = 255
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%)
Query: 31 PGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSL 90
PGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + SFDFR+GK+
Sbjct: 1 PGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFDFRTGKMMPS 60
Query: 91 QKHRNKQR 98
+ +NKQR
Sbjct: 61 KLQKNKQR 68
>gi|440902692|gb|ELR53450.1| Methyl-CpG-binding domain protein 2, partial [Bos grunniens
mutus]
Length = 255
Score = 73.2 bits (178), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%)
Query: 31 PGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSL 90
PGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + SFDFR+GK+
Sbjct: 1 PGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFDFRTGKMMPS 60
Query: 91 QKHRNKQR 98
+ +NKQR
Sbjct: 61 KLQKNKQR 68
>gi|443694004|gb|ELT95247.1| hypothetical protein CAPTEDRAFT_180602 [Capitella teleta]
Length = 119
Score = 72.8 bits (177), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSF 80
++R + P LPPGW REE R GLS GK DV+Y SP G ++R++ ++ +++ + SF
Sbjct: 6 RRRLDIPGLPPGWRREENVRKSGLSAGKTDVYYISPDGTRVRSKPQLCRMVGDAVDLNSF 65
Query: 81 DFRSGK-LNSLQKHRNKQRGNQFEY 104
DFR+GK L S + + RG+ +++
Sbjct: 66 DFRTGKILQSSIRKSKRMRGSSYDF 90
>gi|3800801|gb|AAC68875.1| testis specific methyl-CpG binding protein MBD2, partial [Homo
sapiens]
Length = 146
Score = 72.0 bits (175), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 46/68 (67%)
Query: 31 PGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSL 90
PGW +EEV R GLS GK DV+Y+SP GKK R++ ++ + + + SFDFR+GK+
Sbjct: 1 PGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNTVDLSSFDFRTGKMMPS 60
Query: 91 QKHRNKQR 98
+ +NKQR
Sbjct: 61 KLQKNKQR 68
>gi|198435312|ref|XP_002132141.1| PREDICTED: similar to methyl-CpG binding domain protein 2 [Ciona
intestinalis]
Length = 257
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 17 MLPTKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIP 76
M KK+ LP GW REE R GLS GK DV+Y SP GKK+R++ E+++V+ ++
Sbjct: 1 MNQAKKKVAVLGLPHGWIREECVRQNGLSRGKCDVYYISPTGKKVRSKPELIRVLGSSVD 60
Query: 77 GVSFDFRSGKLNSLQKHRNKQRGNQFE 103
FD+R G+ S +K ++ +R Q++
Sbjct: 61 LTCFDYRLGRFMS-EKVKSSRRQKQYD 86
>gi|340381059|ref|XP_003389039.1| PREDICTED: methyl-CpG-binding domain protein 2-like [Amphimedon
queenslandica]
Length = 319
Score = 66.6 bits (161), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 44/74 (59%), Gaps = 1/74 (1%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDF-RSGKL 87
LP GW RE V R G+S GK DV+YYSPCGKK R++ ++ + + + FDF R+G L
Sbjct: 16 LPSGWRREIVVRKNGMSAGKTDVYYYSPCGKKFRSKPQIARFLGDHADLTCFDFSRAGSL 75
Query: 88 NSLQKHRNKQRGNQ 101
+ R + R Q
Sbjct: 76 GDGTRRRARDRNPQ 89
>gi|391341628|ref|XP_003745129.1| PREDICTED: methyl-CpG-binding domain protein 2-like [Metaseiulus
occidentalis]
Length = 251
Score = 65.5 bits (158), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLN 88
LP GW REE R GLS GKVDV YY P G++ R + ++++ + + +FDFR+GK+N
Sbjct: 6 LPKGWRREEQARKLGLSAGKVDVSYYGPDGQRYRNKQQLVKALGKFVDLSAFDFRTGKIN 65
Query: 89 SL---QKHRNKQRG 99
+ +NKQ+G
Sbjct: 66 PALVRKSKQNKQKG 79
>gi|148224538|ref|NP_001081946.1| methyl-CpG binding domain protein 3 [Xenopus laevis]
gi|5901739|gb|AAD55390.1|AF170347_1 methyl-CpG binding protein MBD3 long form [Xenopus laevis]
Length = 303
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 53/98 (54%), Gaps = 20/98 (20%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDV--------------------FYYSPCGKK 60
KKR+EC LP GW +EEVTR GLS GK DV +P GKK
Sbjct: 3 KKRWECSALPQGWKKEEVTRRSGLSAGKSDVYYYSSSPSRYNRSLRDRVGCLNINPSGKK 62
Query: 61 LRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
R++ ++ + + ++ +FDFR+GK+ + ++N+QR
Sbjct: 63 FRSKPQLARYLGNSMDLSTFDFRTGKMLMSKINKNRQR 100
>gi|55742186|ref|NP_001006901.1| methyl-CpG binding domain protein 3 [Xenopus (Silurana) tropicalis]
gi|49522042|gb|AAH74695.1| methyl-CpG binding domain protein 3 [Xenopus (Silurana) tropicalis]
gi|89267393|emb|CAJ82821.1| methyl-CpG binding domain protein 3 [Xenopus (Silurana) tropicalis]
Length = 301
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 53/98 (54%), Gaps = 20/98 (20%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDV--------------------FYYSPCGKK 60
+KR+EC LP GW +EEVTR GLS GK DV +P GKK
Sbjct: 3 RKRWECSALPQGWKKEEVTRRSGLSAGKSDVYYYSSSPSRYNRSLRDRVGYLNTNPSGKK 62
Query: 61 LRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
R++ ++ + + ++ +FDFR+GK+ + ++N+QR
Sbjct: 63 FRSKPQLARYLGNSMDLSTFDFRTGKMLMSKINKNRQR 100
>gi|195395476|ref|XP_002056362.1| GJ10907 [Drosophila virilis]
gi|194143071|gb|EDW59474.1| GJ10907 [Drosophila virilis]
Length = 342
Score = 62.8 bits (151), Expect = 3e-08, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVS- 79
+KR +C LP GW REEV + G + G VDVFYYSP GK++ ++ ++ + + + VS
Sbjct: 11 RKRVDCTALPKGWQREEVHKKSGCNTG-VDVFYYSPTGKRIESKPQLARQLSAEMFDVSN 69
Query: 80 FDFRSGKL 87
FDF++GK+
Sbjct: 70 FDFQTGKM 77
>gi|195108137|ref|XP_001998649.1| GI24088 [Drosophila mojavensis]
gi|193915243|gb|EDW14110.1| GI24088 [Drosophila mojavensis]
Length = 334
Score = 62.0 bits (149), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVS- 79
+KR +C LP GW REEV + G + G VDVFYYSP GK++ ++ ++ + + + +S
Sbjct: 11 RKRVDCNALPKGWQREEVHKKSGCNTG-VDVFYYSPTGKRIESKPQLARQLNTEMFDISN 69
Query: 80 FDFRSGKLNSLQK 92
FDF++GK+ + ++
Sbjct: 70 FDFQTGKMQTQRQ 82
>gi|358338874|dbj|GAA57483.1| methyl-CpG-binding domain protein 2 [Clonorchis sinensis]
Length = 293
Score = 61.2 bits (147), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 39/59 (66%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKL 87
LP GW REE TR GLS GK DV+Y SP G+K+RT+ E+ ++ +FD+R+GK
Sbjct: 47 LPSGWKREECTRPCGLSTGKTDVYYISPNGQKVRTKHEMKFLLDDAYDISTFDWRTGKF 105
>gi|195037829|ref|XP_001990363.1| GH18280 [Drosophila grimshawi]
gi|193894559|gb|EDV93425.1| GH18280 [Drosophila grimshawi]
Length = 330
Score = 60.1 bits (144), Expect = 2e-07, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVS- 79
+KR +C LP GW REEV R + G VDVFYYSP GK++ ++ ++ + + + +S
Sbjct: 11 RKRVDCNALPKGWQREEVHRKSSCNSG-VDVFYYSPTGKRIESKPQLARQLSAEMFDISN 69
Query: 80 FDFRSGKLNSLQKH 93
FDF++GK+ LQ+
Sbjct: 70 FDFQTGKMQ-LQRQ 82
>gi|193788584|ref|NP_001123339.1| Zn-finger (CXXC)-4 [Ciona intestinalis]
gi|93003308|tpd|FAA00237.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 492
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 43/74 (58%)
Query: 26 CPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSG 85
CP L GWY E++ R G S G+ DV+YYSP ++R+++ + + ++ FDF +G
Sbjct: 50 CPDLGEGWYFEQIVRQHGKSAGQYDVYYYSPQNVRIRSKARLAMLAPSSVSIEDFDFNAG 109
Query: 86 KLNSLQKHRNKQRG 99
K+ ++H K+
Sbjct: 110 KIVKQKEHLCKKEA 123
>gi|56756827|gb|AAW26585.1| SJCHGC02818 protein [Schistosoma japonicum]
gi|226484736|emb|CAX74277.1| Methyl-CpG-binding domain protein 2 [Schistosoma japonicum]
Length = 306
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLN 88
LPPGW REE R GL GK DV+Y SP + +R + E+ ++ SFD+R GK N
Sbjct: 46 LPPGWKREECMRPNGLGTGKSDVYYISPQNQVVRNKQEMQTILGDKYDIASFDWRIGKFN 105
>gi|226468582|emb|CAX69968.1| Methyl-CpG-binding domain protein 2 [Schistosoma japonicum]
Length = 306
Score = 58.5 bits (140), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLN 88
LPPGW REE R GL GK DV+Y SP + +R + E+ ++ SFD+R GK N
Sbjct: 46 LPPGWKREECMRPNGLGTGKSDVYYISPQNQVVRNKQEMQTILGDKYDIASFDWRIGKFN 105
>gi|344249764|gb|EGW05868.1| Methyl-CpG-binding domain protein 1 [Cricetulus griseus]
Length = 330
Score = 58.5 bits (140), Expect = 4e-07, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R E R G S G+ D++Y SP G K+R++ E+ + + FDFR
Sbjct: 19 DCPALGPGWKRREAFRKSGASCGRSDIYYLSPTGDKIRSKVELTRYLGPACDLTLFDFRQ 78
Query: 85 GKL 87
G L
Sbjct: 79 GIL 81
>gi|195444753|ref|XP_002070013.1| GK11825 [Drosophila willistoni]
gi|194166098|gb|EDW80999.1| GK11825 [Drosophila willistoni]
Length = 337
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 7/81 (8%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVG------KVDVFYYSPCGKKLRTRSEVLQVIRGN 74
+KR +C LP GW REEV ++ S KVDVFYYSP GK++ ++ ++ + +
Sbjct: 11 RKRVDCTALPKGWQREEVRKSANSSSAPNNNNNKVDVFYYSPTGKRIESKPQLARQLGSE 70
Query: 75 IPGV-SFDFRSGKLNSLQKHR 94
+ + +FDF+SGK+ Q+ R
Sbjct: 71 MFDIGNFDFQSGKMVQQQQQR 91
>gi|74224160|dbj|BAE33700.1| unnamed protein product [Mus musculus]
Length = 580
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R E R G S G+ D++Y SP G+K+R++ E+ + + FDFR
Sbjct: 7 DCPALGPGWKRRESFRKSGASFGRSDIYYQSPTGEKIRSKVELTRYLGPACDLTLFDFRQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GTL 69
>gi|157817372|ref|NP_038622.2| methyl-CpG-binding domain protein 1 [Mus musculus]
gi|12835923|dbj|BAB23419.1| unnamed protein product [Mus musculus]
Length = 588
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R E R G S G+ D++Y SP G+K+R++ E+ + + FDFR
Sbjct: 7 DCPALGPGWKRRESFRKSGASFGRSDIYYQSPTGEKIRSKVELTRYLGPACDLTLFDFRQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GTL 69
>gi|148677583|gb|EDL09530.1| methyl-CpG binding domain protein 1, isoform CRA_a [Mus musculus]
Length = 572
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R E R G S G+ D++Y SP G+K+R++ E+ + + FDFR
Sbjct: 7 DCPALGPGWKRRESFRKSGASFGRSDIYYQSPTGEKIRSKVELTRYLGPACDLTLFDFRQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GTL 69
>gi|241631815|ref|XP_002410284.1| conserved hypothetical protein [Ixodes scapularis]
gi|215503366|gb|EEC12860.1| conserved hypothetical protein [Ixodes scapularis]
Length = 686
Score = 58.2 bits (139), Expect = 7e-07, Method: Composition-based stats.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 3/62 (4%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV---LQVIRGNIPGVSF 80
++ P LPPGWYR+ R G S GK DV+ +SP GKK R+R+E+ L+ + +P +F
Sbjct: 25 FDDPNLPPGWYRKVTQRQAGRSAGKFDVYIFSPEGKKFRSRNELQAHLEKVGSPLPLSNF 84
Query: 81 DF 82
DF
Sbjct: 85 DF 86
>gi|148677584|gb|EDL09531.1| methyl-CpG binding domain protein 1, isoform CRA_b [Mus musculus]
Length = 556
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R E R G S G+ D++Y SP G+K+R++ E+ + + FDFR
Sbjct: 7 DCPALGPGWKRRESFRKSGASFGRSDIYYQSPTGEKIRSKVELTRYLGPACDLTLFDFRQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GTL 69
>gi|148677588|gb|EDL09535.1| methyl-CpG binding domain protein 1, isoform CRA_f [Mus musculus]
Length = 636
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R E R G S G+ D++Y SP G+K+R++ E+ + + FDFR
Sbjct: 7 DCPALGPGWKRRESFRKSGASFGRSDIYYQSPTGEKIRSKVELTRYLGPACDLTLFDFRQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GTL 69
>gi|148677585|gb|EDL09532.1| methyl-CpG binding domain protein 1, isoform CRA_c [Mus musculus]
Length = 569
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R E R G S G+ D++Y SP G+K+R++ E+ + + FDFR
Sbjct: 7 DCPALGPGWKRRESFRKSGASFGRSDIYYQSPTGEKIRSKVELTRYLGPACDLTLFDFRQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GTL 69
>gi|47122682|gb|AAH69837.1| Mbd1 protein [Mus musculus]
Length = 588
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R E R G S G+ D++Y SP G+K+R++ E+ + + FDFR
Sbjct: 7 DCPALGPGWKRRESFRKSGASFGRSDIYYQSPTGEKIRSKVELTRYLGPACDLTLFDFRQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GTL 69
>gi|158523333|sp|Q9Z2E2.2|MBD1_MOUSE RecName: Full=Methyl-CpG-binding domain protein 1; AltName:
Full=Methyl-CpG-binding protein MBD1
Length = 636
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R E R G S G+ D++Y SP G+K+R++ E+ + + FDFR
Sbjct: 7 DCPALGPGWKRRESFRKSGASFGRSDIYYQSPTGEKIRSKVELTRYLGPACDLTLFDFRQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GTL 69
>gi|148677587|gb|EDL09534.1| methyl-CpG binding domain protein 1, isoform CRA_e [Mus musculus]
Length = 628
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R E R G S G+ D++Y SP G+K+R++ E+ + + FDFR
Sbjct: 7 DCPALGPGWKRRESFRKSGASFGRSDIYYQSPTGEKIRSKVELTRYLGPACDLTLFDFRQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GTL 69
>gi|5731990|gb|AAD48908.1|AF120978_1 methyl-CpG binding protein 1 [Mus musculus domesticus]
gi|3800789|gb|AAC68869.1| methyl-CpG binding protein MBD1 [Mus musculus]
Length = 636
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R E R G S G+ D++Y SP G+K+R++ E+ + + FDFR
Sbjct: 7 DCPALGPGWKRRESFRKSGASFGRSDIYYQSPTGEKIRSKVELTRYLGPACDLTLFDFRQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GTL 69
>gi|148677586|gb|EDL09533.1| methyl-CpG binding domain protein 1, isoform CRA_d [Mus musculus]
Length = 520
Score = 57.8 bits (138), Expect = 8e-07, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R E R G S G+ D++Y SP G+K+R++ E+ + + FDFR
Sbjct: 7 DCPALGPGWKRRESFRKSGASFGRSDIYYQSPTGEKIRSKVELTRYLGPACDLTLFDFRQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GTL 69
>gi|344307888|ref|XP_003422610.1| PREDICTED: methyl-CpG-binding domain protein 3-like [Loxodonta
africana]
Length = 276
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 43/62 (69%)
Query: 37 EVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNK 96
EV R GLS G DVFYYSP GKK R++ ++ + + G++ +FDFR+G++ + ++++
Sbjct: 4 EVPRRSGLSAGHRDVFYYSPSGKKFRSKPQLARYLGGSMDLSTFDFRTGRMLMSKVNKSR 63
Query: 97 QR 98
QR
Sbjct: 64 QR 65
>gi|58865426|ref|NP_001011924.1| methyl-CpG-binding domain protein 1 [Rattus norvegicus]
gi|51859293|gb|AAH81932.1| Methyl-CpG binding domain protein 1 [Rattus norvegicus]
Length = 533
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R E R G S G+ D++Y SP G+K+R++ E+ + + FDFR
Sbjct: 7 DCPALGPGWKRREAFRKSGASCGRSDIYYRSPTGEKIRSKIELTRYLGPACDLTLFDFRQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|334350404|ref|XP_001371626.2| PREDICTED: methyl-CpG-binding domain protein 1-like [Monodelphis
domestica]
Length = 644
Score = 57.4 bits (137), Expect = 1e-06, Method: Composition-based stats.
Identities = 24/66 (36%), Positives = 39/66 (59%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R E +R G + G+ D +Y SP G+++R++ E+ + + + FDF+
Sbjct: 7 DCPTLGPGWKRREASRKSGATCGRTDTYYQSPTGERIRSKVELTRFLGPDCDLSCFDFKR 66
Query: 85 GKLNSL 90
G L L
Sbjct: 67 GVLQYL 72
>gi|149027168|gb|EDL82892.1| rCG41735, isoform CRA_a [Rattus norvegicus]
gi|149027170|gb|EDL82894.1| rCG41735, isoform CRA_a [Rattus norvegicus]
gi|149027172|gb|EDL82896.1| rCG41735, isoform CRA_a [Rattus norvegicus]
gi|149027173|gb|EDL82897.1| rCG41735, isoform CRA_a [Rattus norvegicus]
Length = 330
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R E R G S G+ D++Y SP G+K+R++ E+ + + FDFR
Sbjct: 7 DCPALGPGWKRREAFRKSGASCGRSDIYYRSPTGEKIRSKIELTRYLGPACDLTLFDFRQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|149027169|gb|EDL82893.1| rCG41735, isoform CRA_b [Rattus norvegicus]
gi|149027171|gb|EDL82895.1| rCG41735, isoform CRA_b [Rattus norvegicus]
Length = 322
Score = 57.0 bits (136), Expect = 1e-06, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R E R G S G+ D++Y SP G+K+R++ E+ + + FDFR
Sbjct: 7 DCPALGPGWKRREAFRKSGASCGRSDIYYRSPTGEKIRSKIELTRYLGPACDLTLFDFRQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|146187002|gb|AAI39876.1| Mbd1 protein [Danio rerio]
Length = 980
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGK 86
P L GW R+EV R G S G+ D +Y SP G+K+R+R E+ + I ++ +FDF+SG+
Sbjct: 274 PALGKGWKRKEVFRRSGTSEGRSDTYYISPRGRKVRSRVELTKHIGHSVDLTNFDFKSGQ 333
Query: 87 L 87
Sbjct: 334 F 334
>gi|74184170|dbj|BAE37086.1| unnamed protein product [Mus musculus]
Length = 298
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 37/63 (58%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R E R G S G+ D++Y SP G+K+R++ E+ + + FDFR
Sbjct: 7 DCPALGPGWKRRESFRKSGASFGRSDIYYQSPTGEKIRSKVELTRYLGPACDLTLFDFRQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GTL 69
>gi|113676658|ref|NP_001038218.1| methyl-CpG binding domain protein 1 [Danio rerio]
gi|33468627|emb|CAE30422.1| novel protein similar to human and mouse methyl-CpG binding domain
protein 1 (MBD1) [Danio rerio]
Length = 673
Score = 56.2 bits (134), Expect = 2e-06, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGK 86
P L GW R+EV R G S G+ D +Y SP G+K+R+R E+ + I ++ +FDF+SG+
Sbjct: 274 PALGKGWKRKEVFRRSGTSEGRSDTYYISPRGRKVRSRVELTKHIGHSVDLTNFDFKSGQ 333
Query: 87 L 87
Sbjct: 334 F 334
>gi|116284159|gb|AAI24167.1| Mbd1 protein [Danio rerio]
Length = 849
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGK 86
P L GW R+EV R G S G+ D +Y SP G+K+R+R E+ + I ++ +FDF+SG+
Sbjct: 201 PALGKGWKRKEVFRRSGTSEGRSDTYYISPRGRKVRSRVELTKHIGHSVDLTNFDFKSGQ 260
Query: 87 L 87
Sbjct: 261 F 261
>gi|158298247|ref|XP_318432.4| AGAP003982-PA [Anopheles gambiae str. PEST]
gi|157014432|gb|EAA43676.4| AGAP003982-PA [Anopheles gambiae str. PEST]
Length = 203
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 35/52 (67%), Gaps = 3/52 (5%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIR 72
+KR +C LP GW REEV R GLS GKVDV+YYS + +R+ + ++ IR
Sbjct: 7 RKRTDCAALPKGWQREEVLRKTGLSAGKVDVYYYS---RAMRSDTSLIPPIR 55
>gi|157169513|ref|XP_001657876.1| methyl-cpg binding protein, mbd [Aedes aegypti]
gi|108883656|gb|EAT47881.1| AAEL001033-PA [Aedes aegypti]
Length = 202
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 26/35 (74%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYS 55
+KR +C LP GW REEV R GLS GKVDV+YYS
Sbjct: 7 RKRSDCAALPKGWQREEVLRKSGLSAGKVDVYYYS 41
>gi|332849926|ref|XP_003315957.1| PREDICTED: uncharacterized protein LOC455418 isoform 8 [Pan
troglodytes]
Length = 656
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 9 SLVSNLLKMLPTKKRYE----CPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTR 64
+L S+ L +LP E CP L PGW R EV R G + G+ D +Y SP G ++R++
Sbjct: 13 ALNSDRLLLLPVASMAEDWLDCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSK 72
Query: 65 SEVLQVIRGNIPGVSFDFRSGKL 87
E+ + + FDF+ G L
Sbjct: 73 VELTRYLGPACDLTLFDFKQGIL 95
>gi|194380002|dbj|BAG58353.1| unnamed protein product [Homo sapiens]
Length = 656
Score = 55.5 bits (132), Expect = 4e-06, Method: Composition-based stats.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 4/83 (4%)
Query: 9 SLVSNLLKMLPTKKRYE----CPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTR 64
+L S+ L +LP E CP L PGW R EV R G + G+ D +Y SP G ++R++
Sbjct: 13 ALNSDRLLLLPVASMAEDWLDCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSK 72
Query: 65 SEVLQVIRGNIPGVSFDFRSGKL 87
E+ + + FDF+ G L
Sbjct: 73 VELTRYLGPACDLTLFDFKQGIL 95
>gi|432102921|gb|ELK30351.1| Methyl-CpG-binding domain protein 1 [Myotis davidii]
Length = 589
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+++ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELIRYLGPSCDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|170042470|ref|XP_001848947.1| methyl-cpg binding protein [Culex quinquefasciatus]
gi|167866023|gb|EDS29406.1| methyl-cpg binding protein [Culex quinquefasciatus]
Length = 202
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/35 (65%), Positives = 26/35 (74%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYS 55
+KR +C LP GW REEV R GLS GKVDV+YYS
Sbjct: 7 RKRTDCAALPKGWQREEVLRKSGLSAGKVDVYYYS 41
>gi|148225943|ref|NP_001080512.1| methyl-CpG binding domain protein 1 [Xenopus laevis]
gi|27694795|gb|AAH43835.1| Mbd1-prov protein [Xenopus laevis]
Length = 321
Score = 55.1 bits (131), Expect = 5e-06, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSG 85
P L PGW R V R G + G D +Y SP GKK+R+R E+ + + + FDFR+G
Sbjct: 9 PLLGPGWKRRNVVRKSGATCGHSDTYYRSPAGKKIRSRIELAKYLGSAVDLSFFDFRNG 67
>gi|403268207|ref|XP_003926170.1| PREDICTED: methyl-CpG-binding domain protein 1 [Saimiri boliviensis
boliviensis]
Length = 940
Score = 54.7 bits (130), Expect = 6e-06, Method: Composition-based stats.
Identities = 30/82 (36%), Positives = 43/82 (52%), Gaps = 4/82 (4%)
Query: 10 LVSNLLKMLPTKKRYE----CPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRS 65
LV + L +LP E CP L PGW R EV R G + G+ D +Y SP G ++R++
Sbjct: 286 LVPDWLLLLPVASMAEDWLDCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKV 345
Query: 66 EVLQVIRGNIPGVSFDFRSGKL 87
E+ + + FDF+ G L
Sbjct: 346 ELTRYLGPACDLSLFDFKQGIL 367
>gi|395822931|ref|XP_003784756.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 2
[Otolemur garnettii]
Length = 593
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPECDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|332236737|ref|XP_003267556.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 13
[Nomascus leucogenys]
Length = 656
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 4/80 (5%)
Query: 12 SNLLKMLPTKKRYE----CPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
S+ L +LP E CP L PGW R EV R G + G+ D +Y SP G ++R++ E+
Sbjct: 16 SDRLLLLPVASMAEDWLDCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVEL 75
Query: 68 LQVIRGNIPGVSFDFRSGKL 87
+ + FDF+ G L
Sbjct: 76 TRYLGPACDLTLFDFKQGIL 95
>gi|444728934|gb|ELW69368.1| Methyl-CpG-binding domain protein 1 [Tupaia chinensis]
Length = 598
Score = 54.7 bits (130), Expect = 7e-06, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPSCDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|291394373|ref|XP_002713579.1| PREDICTED: methyl-CpG binding domain protein 1 isoform 2
[Oryctolagus cuniculus]
Length = 557
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D++Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDIYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GVL 69
>gi|291394371|ref|XP_002713578.1| PREDICTED: methyl-CpG binding domain protein 1 isoform 1
[Oryctolagus cuniculus]
Length = 606
Score = 54.7 bits (130), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D++Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDIYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GVL 69
>gi|291394375|ref|XP_002713580.1| PREDICTED: methyl-CpG binding domain protein 1 isoform 3
[Oryctolagus cuniculus]
Length = 550
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D++Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDIYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GVL 69
>gi|395822929|ref|XP_003784755.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 1
[Otolemur garnettii]
Length = 543
Score = 54.3 bits (129), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPECDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|395749896|ref|XP_003780589.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein 2
[Pongo abelii]
Length = 299
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 25/33 (75%)
Query: 22 KRYECPQLPPGWYREEVTRNKGLSVGKVDVFYY 54
KR +CP LPPGW +EEV R GLS GK DV+Y+
Sbjct: 78 KRMDCPALPPGWKKEEVIRKSGLSAGKSDVYYF 110
>gi|432859870|ref|XP_004069277.1| PREDICTED: uncharacterized protein LOC101158689 [Oryzias latipes]
Length = 829
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%), Gaps = 2/69 (2%)
Query: 19 PTKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGV 78
P + E P L GW R+EV R G S+G+ DV+Y SP G ++R+R E+ V+ ++
Sbjct: 135 PDEGWVEWPALGEGWKRKEVVRRSGSSIGQKDVYYMSPRGDRVRSRVELASVLPIDL--T 192
Query: 79 SFDFRSGKL 87
F+F++GK
Sbjct: 193 HFEFKTGKF 201
>gi|426385952|ref|XP_004059460.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 3 [Gorilla
gorilla gorilla]
Length = 549
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|426385950|ref|XP_004059459.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 2 [Gorilla
gorilla gorilla]
Length = 655
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|397513935|ref|XP_003827260.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 1 [Pan
paniscus]
Length = 655
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|124111383|gb|ABM92100.1| MBD1 [Pan troglodytes]
Length = 592
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|426385960|ref|XP_004059464.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 7 [Gorilla
gorilla gorilla]
Length = 574
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|5777948|gb|AAD51444.1|AF078832_1 methyl-CpG binding protein splice variant 3 [Homo sapiens]
Length = 549
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|417412028|gb|JAA52430.1| Putative methyl-cpg binding transcription regulator, partial
[Desmodus rotundus]
Length = 629
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 24 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 83
Query: 85 GKL 87
G L
Sbjct: 84 GIL 86
>gi|332849922|ref|XP_003315955.1| PREDICTED: uncharacterized protein LOC455418 isoform 6 [Pan
troglodytes]
Length = 535
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|332849918|ref|XP_003315953.1| PREDICTED: uncharacterized protein LOC455418 isoform 4 [Pan
troglodytes]
gi|397513941|ref|XP_003827263.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 4 [Pan
paniscus]
gi|343958670|dbj|BAK63190.1| methyl-CpG-binding domain protein 1 [Pan troglodytes]
Length = 574
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|332849910|ref|XP_003315950.1| PREDICTED: uncharacterized protein LOC455418 isoform 1 [Pan
troglodytes]
gi|410221324|gb|JAA07881.1| methyl-CpG binding domain protein 1 [Pan troglodytes]
gi|410267102|gb|JAA21517.1| methyl-CpG binding domain protein 1 [Pan troglodytes]
gi|410294438|gb|JAA25819.1| methyl-CpG binding domain protein 1 [Pan troglodytes]
gi|410335985|gb|JAA36939.1| methyl-CpG binding domain protein 1 [Pan troglodytes]
Length = 655
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|332236729|ref|XP_003267552.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 9
[Nomascus leucogenys]
Length = 574
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|323462161|ref|NP_001191072.1| methyl-CpG-binding domain protein 1 isoform 12 [Homo sapiens]
Length = 535
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|323462147|ref|NP_001191065.1| methyl-CpG-binding domain protein 1 isoform 6 [Homo sapiens]
Length = 655
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|323462155|ref|NP_001191069.1| methyl-CpG-binding domain protein 1 isoform 9 [Homo sapiens]
Length = 574
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|194374621|dbj|BAG62425.1| unnamed protein product [Homo sapiens]
Length = 535
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|156105673|ref|NP_056669.2| methyl-CpG-binding domain protein 1 isoform 3 [Homo sapiens]
gi|21620082|gb|AAH33242.1| Methyl-CpG binding domain protein 1 [Homo sapiens]
gi|119583366|gb|EAW62962.1| methyl-CpG binding domain protein 1, isoform CRA_a [Homo sapiens]
Length = 549
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|11514253|pdb|1D9N|A Chain A, Solution Structure Of The Methyl-Cpg-Binding Domain Of
The Methylation-Dependent Transcriptional Repressor
Mbd1PCM1
gi|14488681|pdb|1IG4|A Chain A, Solution Structure Of The Methyl-Cpg-Binding Domain Of
Human Mbd1 In Complex With Methylated Dna
Length = 75
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|383418411|gb|AFH32419.1| methyl-CpG-binding domain protein 1 isoform 6 [Macaca mulatta]
Length = 599
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|395749868|ref|XP_003779018.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 2 [Pongo
abelii]
Length = 655
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|124054431|gb|ABM89443.1| MBD1 [Pongo pygmaeus]
Length = 592
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|426385958|ref|XP_004059463.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 6 [Gorilla
gorilla gorilla]
gi|426385966|ref|XP_004059467.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 10
[Gorilla gorilla gorilla]
Length = 630
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|395749879|ref|XP_003779023.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 7 [Pongo
abelii]
Length = 574
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|383418415|gb|AFH32421.1| methyl-CpG-binding domain protein 1 isoform 6 [Macaca mulatta]
gi|384947076|gb|AFI37143.1| methyl-CpG-binding domain protein 1 isoform 6 [Macaca mulatta]
Length = 655
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|323462151|ref|NP_001191067.1| methyl-CpG-binding domain protein 1 isoform 8 [Homo sapiens]
Length = 629
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|426385964|ref|XP_004059466.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 9 [Gorilla
gorilla gorilla]
Length = 567
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|426385948|ref|XP_004059458.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 1 [Gorilla
gorilla gorilla]
gi|426385962|ref|XP_004059465.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 8 [Gorilla
gorilla gorilla]
Length = 605
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|332849916|ref|XP_512130.3| PREDICTED: uncharacterized protein LOC455418 isoform 9 [Pan
troglodytes]
gi|397513939|ref|XP_003827262.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 3 [Pan
paniscus]
Length = 630
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|332236719|ref|XP_003267547.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 4
[Nomascus leucogenys]
Length = 549
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|332236715|ref|XP_003267545.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 2
[Nomascus leucogenys]
Length = 655
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|323462149|ref|NP_001191066.1| methyl-CpG-binding domain protein 1 isoform 7 [Homo sapiens]
gi|194378484|dbj|BAG63407.1| unnamed protein product [Homo sapiens]
gi|261858622|dbj|BAI45833.1| methyl-CpG binding domain protein 1 [synthetic construct]
Length = 630
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|338728007|ref|XP_003365601.1| PREDICTED: methyl-CpG-binding domain protein 1 [Equus caballus]
Length = 557
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 G-------KLNSLQKHRNKQR 98
G K +SL KQ+
Sbjct: 67 GVLCYPAPKAHSLAAPSRKQK 87
>gi|124013742|gb|ABM88148.1| MBD1 [Macaca nemestrina]
Length = 142
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|426385954|ref|XP_004059461.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 4 [Gorilla
gorilla gorilla]
Length = 550
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|21464115|ref|NP_056670.2| methyl-CpG-binding domain protein 1 isoform 2 [Homo sapiens]
gi|119583370|gb|EAW62966.1| methyl-CpG binding domain protein 1, isoform CRA_e [Homo sapiens]
Length = 586
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|5777946|gb|AAD51443.1|AF078831_1 methyl-CpG binding protein splice variant 2 [Homo sapiens]
Length = 586
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|395749870|ref|XP_003779019.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 3 [Pongo
abelii]
Length = 550
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|383418413|gb|AFH32420.1| methyl-CpG-binding domain protein 1 isoform 6 [Macaca mulatta]
Length = 609
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|297702598|ref|XP_002828265.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 1 [Pongo
abelii]
Length = 605
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|297275298|ref|XP_001098362.2| PREDICTED: methyl-CpG-binding domain protein 1-like isoform 1
[Macaca mulatta]
Length = 630
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|55727757|emb|CAH90629.1| hypothetical protein [Pongo abelii]
Length = 605
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|7710143|ref|NP_002375.1| methyl-CpG-binding domain protein 1 isoform 4 [Homo sapiens]
gi|5777950|gb|AAD51445.1|AF078833_1 methyl-CpG binding protein splice variant 4 [Homo sapiens]
gi|119583371|gb|EAW62967.1| methyl-CpG binding domain protein 1, isoform CRA_f [Homo sapiens]
Length = 503
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|5777944|gb|AAD51442.1|AF078830_1 methyl-CpG binding protein splice variant 1 [Homo sapiens]
Length = 605
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|323462159|ref|NP_001191071.1| methyl-CpG-binding domain protein 1 isoform 11 [Homo sapiens]
gi|31414478|emb|CAD92308.1| methyl-CpG binding domain protein 1, splice form 6 [Homo sapiens]
gi|119583367|gb|EAW62963.1| methyl-CpG binding domain protein 1, isoform CRA_b [Homo sapiens]
Length = 550
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|21464117|ref|NP_056671.2| methyl-CpG-binding domain protein 1 isoform 1 [Homo sapiens]
gi|323462153|ref|NP_001191068.1| methyl-CpG-binding domain protein 1 isoform 1 [Homo sapiens]
gi|50401200|sp|Q9UIS9.2|MBD1_HUMAN RecName: Full=Methyl-CpG-binding domain protein 1; AltName:
Full=CXXC-type zinc finger protein 3; AltName:
Full=Methyl-CpG-binding protein MBD1; AltName:
Full=Protein containing methyl-CpG-binding domain 1
gi|119583369|gb|EAW62965.1| methyl-CpG binding domain protein 1, isoform CRA_d [Homo sapiens]
Length = 605
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|395749875|ref|XP_003779021.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 5 [Pongo
abelii]
Length = 630
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|332849924|ref|XP_003315956.1| PREDICTED: uncharacterized protein LOC455418 isoform 7 [Pan
troglodytes]
Length = 567
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|332849920|ref|XP_003315954.1| PREDICTED: uncharacterized protein LOC455418 isoform 5 [Pan
troglodytes]
gi|410221322|gb|JAA07880.1| methyl-CpG binding domain protein 1 [Pan troglodytes]
gi|410267100|gb|JAA21516.1| methyl-CpG binding domain protein 1 [Pan troglodytes]
gi|410294436|gb|JAA25818.1| methyl-CpG binding domain protein 1 [Pan troglodytes]
gi|410335983|gb|JAA36938.1| methyl-CpG binding domain protein 1 [Pan troglodytes]
Length = 605
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|332849912|ref|XP_003315951.1| PREDICTED: uncharacterized protein LOC455418 isoform 2 [Pan
troglodytes]
gi|397513937|ref|XP_003827261.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 2 [Pan
paniscus]
Length = 550
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|332236727|ref|XP_003267551.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 8
[Nomascus leucogenys]
Length = 630
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|332236713|ref|XP_003267544.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 1
[Nomascus leucogenys]
gi|332236731|ref|XP_003267553.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 10
[Nomascus leucogenys]
Length = 605
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|323462157|ref|NP_001191070.1| methyl-CpG-binding domain protein 1 isoform 10 [Homo sapiens]
Length = 567
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|67968403|dbj|BAE00563.1| unnamed protein product [Macaca fascicularis]
Length = 566
Score = 53.9 bits (128), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|355701946|gb|EHH29299.1| hypothetical protein EGK_09681 [Macaca mulatta]
gi|355755028|gb|EHH58895.1| hypothetical protein EGM_08857 [Macaca fascicularis]
gi|380812826|gb|AFE78287.1| methyl-CpG-binding domain protein 1 isoform 1 [Macaca mulatta]
gi|380812830|gb|AFE78289.1| methyl-CpG-binding domain protein 1 isoform 6 [Macaca mulatta]
gi|383410407|gb|AFH28417.1| methyl-CpG-binding domain protein 1 isoform 6 [Macaca mulatta]
gi|384947074|gb|AFI37142.1| methyl-CpG-binding domain protein 1 isoform 1 [Macaca mulatta]
Length = 605
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|431896198|gb|ELK05614.1| Methyl-CpG-binding domain protein 1 [Pteropus alecto]
Length = 639
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPSCDLSLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|332236717|ref|XP_003267546.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 3
[Nomascus leucogenys]
Length = 550
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|395749872|ref|XP_003779020.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 4 [Pongo
abelii]
Length = 586
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|390473975|ref|XP_002757279.2| PREDICTED: methyl-CpG-binding domain protein 1 isoform 1
[Callithrix jacchus]
Length = 642
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|332236733|ref|XP_003267554.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 11
[Nomascus leucogenys]
Length = 567
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|426253820|ref|XP_004020589.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 1 [Ovis
aries]
Length = 575
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GVL 69
>gi|149720933|ref|XP_001499382.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 3 [Equus
caballus]
Length = 553
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 7/81 (8%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 G-------KLNSLQKHRNKQR 98
G K +SL KQ+
Sbjct: 67 GVLCYPAPKAHSLAAPSRKQK 87
>gi|440895457|gb|ELR47635.1| Methyl-CpG-binding domain protein 1 [Bos grunniens mutus]
Length = 644
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GVL 69
>gi|114050963|ref|NP_001039946.1| methyl-CpG-binding domain protein 1 [Bos taurus]
gi|86437962|gb|AAI12459.1| Methyl-CpG binding domain protein 1 [Bos taurus]
gi|296473709|tpg|DAA15824.1| TPA: methyl-CpG binding domain protein 1 [Bos taurus]
Length = 642
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GVL 69
>gi|402903118|ref|XP_003914426.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 2 [Papio
anubis]
Length = 574
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|297275300|ref|XP_002800978.1| PREDICTED: methyl-CpG-binding domain protein 1-like isoform 2
[Macaca mulatta]
Length = 550
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|296222659|ref|XP_002757280.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 2
[Callithrix jacchus]
Length = 668
Score = 53.5 bits (127), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 33 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 92
Query: 85 GKL 87
G L
Sbjct: 93 GIL 95
>gi|351710467|gb|EHB13386.1| Methyl-CpG-binding domain protein 1 [Heterocephalus glaber]
Length = 622
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVYRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLSLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|417411980|gb|JAA52407.1| Putative methyl-cpg binding transcription regulator, partial
[Desmodus rotundus]
Length = 621
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 24 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 83
Query: 85 GKL 87
G L
Sbjct: 84 GIL 86
>gi|348576643|ref|XP_003474096.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein
1-like [Cavia porcellus]
Length = 633
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + + FDF+
Sbjct: 7 DCPALGPGWKRREVYRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPSCDLSLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|149720937|ref|XP_001499413.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 5 [Equus
caballus]
Length = 583
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GVL 69
>gi|383418417|gb|AFH32422.1| methyl-CpG-binding domain protein 1 isoform 6 [Macaca mulatta]
Length = 606
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|323462163|ref|NP_001191080.1| methyl-CpG-binding domain protein 1 isoform 13 [Homo sapiens]
Length = 536
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|5739181|gb|AAD50371.1| methyl-CpG binding protein 1 [Homo sapiens]
Length = 605
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|402903116|ref|XP_003914425.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 1 [Papio
anubis]
Length = 630
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|380812828|gb|AFE78288.1| methyl-CpG-binding domain protein 1 isoform 6 [Macaca mulatta]
Length = 559
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|158256470|dbj|BAF84208.1| unnamed protein product [Homo sapiens]
Length = 605
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKPGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|338727997|ref|XP_003365596.1| PREDICTED: methyl-CpG-binding domain protein 1 [Equus caballus]
Length = 533
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GVL 69
>gi|395749877|ref|XP_003779022.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 6 [Pongo
abelii]
Length = 536
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|345803421|ref|XP_537343.3| PREDICTED: methyl-CpG-binding domain protein 1 [Canis lupus
familiaris]
Length = 634
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 10 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 69
Query: 85 GKL 87
G L
Sbjct: 70 GIL 72
>gi|144704702|gb|ABP02056.1| methyl-CpG binding domain protein 1 variant 8 [Homo sapiens]
Length = 536
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|417411861|gb|JAA52351.1| Putative methyl-cpg binding transcription regulator, partial
[Desmodus rotundus]
Length = 598
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 24 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 83
Query: 85 GKL 87
G L
Sbjct: 84 GIL 86
>gi|338728001|ref|XP_003365598.1| PREDICTED: methyl-CpG-binding domain protein 1 [Equus caballus]
Length = 652
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GVL 69
>gi|426385956|ref|XP_004059462.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 5 [Gorilla
gorilla gorilla]
Length = 556
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|21464119|ref|NP_056723.2| methyl-CpG-binding domain protein 1 isoform 5 [Homo sapiens]
gi|119583368|gb|EAW62964.1| methyl-CpG binding domain protein 1, isoform CRA_c [Homo sapiens]
Length = 556
Score = 53.5 bits (127), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|2239126|emb|CAA71735.1| methyl-CpG binding protein [Homo sapiens]
Length = 556
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|426253822|ref|XP_004020590.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 2 [Ovis
aries]
Length = 557
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GVL 69
>gi|338728009|ref|XP_003365602.1| PREDICTED: methyl-CpG-binding domain protein 1 [Equus caballus]
Length = 532
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GVL 69
>gi|338727999|ref|XP_003365597.1| PREDICTED: methyl-CpG-binding domain protein 1 [Equus caballus]
Length = 638
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GVL 69
>gi|332236725|ref|XP_003267550.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 7
[Nomascus leucogenys]
Length = 556
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|149720931|ref|XP_001499371.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 2 [Equus
caballus]
Length = 602
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GVL 69
>gi|149720935|ref|XP_001499360.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 1 [Equus
caballus]
Length = 546
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GVL 69
>gi|410977694|ref|XP_003995236.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 5 [Felis
catus]
Length = 558
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|380812832|gb|AFE78290.1| methyl-CpG-binding domain protein 1 isoform 6 [Macaca mulatta]
Length = 556
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|410977690|ref|XP_003995234.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 3 [Felis
catus]
Length = 594
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|338728003|ref|XP_003365599.1| PREDICTED: methyl-CpG-binding domain protein 1 [Equus caballus]
Length = 627
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GVL 69
>gi|410977686|ref|XP_003995232.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 1 [Felis
catus]
gi|410977698|ref|XP_003995238.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 7 [Felis
catus]
Length = 607
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|301789485|ref|XP_002930161.1| PREDICTED: methyl-CpG-binding domain protein 1-like [Ailuropoda
melanoleuca]
Length = 643
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|410977692|ref|XP_003995235.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 4 [Felis
catus]
Length = 663
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|281348710|gb|EFB24294.1| hypothetical protein PANDA_020519 [Ailuropoda melanoleuca]
Length = 576
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|338728005|ref|XP_003365600.1| PREDICTED: methyl-CpG-binding domain protein 1 [Equus caballus]
Length = 571
Score = 53.1 bits (126), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GVL 69
>gi|338728011|ref|XP_003365603.1| PREDICTED: methyl-CpG-binding domain protein 1 [Equus caballus]
Length = 500
Score = 52.8 bits (125), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GVL 69
>gi|335279477|ref|XP_003121489.2| PREDICTED: methyl-CpG-binding domain protein 1 [Sus scrofa]
Length = 536
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLSLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|410977688|ref|XP_003995233.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 2 [Felis
catus]
Length = 551
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|116487716|gb|AAI26018.1| LOC779091 protein [Xenopus laevis]
Length = 612
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSG 85
P L PGW R R G S G +D++Y SP G+++R++ E+ + + ++ FDFR+G
Sbjct: 48 PLLGPGWKRRISVRKSGASCGHIDIYYRSPTGEQMRSKIELAKYLGSSVDLSLFDFRNG 106
>gi|410977702|ref|XP_003995240.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 9 [Felis
catus]
gi|410977704|ref|XP_003995241.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 10 [Felis
catus]
Length = 632
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|410977700|ref|XP_003995239.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 8 [Felis
catus]
Length = 576
Score = 52.8 bits (125), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|410977696|ref|XP_003995237.1| PREDICTED: methyl-CpG-binding domain protein 1 isoform 6 [Felis
catus]
Length = 505
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 24/63 (38%), Positives = 36/63 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R EV R G + G+ D +Y SP G ++R++ E+ + + FDF+
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQ 66
Query: 85 GKL 87
G L
Sbjct: 67 GIL 69
>gi|160420127|ref|NP_001104183.1| methyl-CpG binding domain protein 1 [Xenopus laevis]
gi|159155455|gb|AAI54959.1| LOC779091 protein [Xenopus laevis]
Length = 626
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSG 85
P L PGW R R G S G +D++Y SP G+++R++ E+ + + ++ FDFR+G
Sbjct: 9 PLLGPGWKRRISVRKSGASCGHIDIYYRSPTGEQMRSKIELAKYLGSSVDLSLFDFRNG 67
>gi|355701339|gb|AES01651.1| methyl-CpG binding domain protein 1 [Mustela putorius furo]
Length = 341
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 4/67 (5%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV-LQVIRGNIPGVS---F 80
ECP L PGW R EV R G + G+ D +Y SP G ++R++ E+ +++ R P F
Sbjct: 39 ECPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTVELTRYLGPACDLSLF 98
Query: 81 DFRSGKL 87
DF+ G L
Sbjct: 99 DFKQGIL 105
>gi|348502661|ref|XP_003438886.1| PREDICTED: methyl-CpG-binding domain protein 4-like [Oreochromis
niloticus]
Length = 385
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 39/67 (58%), Gaps = 6/67 (8%)
Query: 26 CPQ--LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSE----VLQVIRGNIPGVS 79
CP LPPGW RE R G + GK+DV++ SP G++ R+R+ +L+ GN+
Sbjct: 13 CPSSALPPGWIREVRQRKAGKTAGKLDVYFTSPEGQRFRSRASLRTFLLESGSGNLDISL 72
Query: 80 FDFRSGK 86
FDF + K
Sbjct: 73 FDFTTSK 79
>gi|321459031|gb|EFX70089.1| hypothetical protein DAPPUDRAFT_61643 [Daphnia pulex]
Length = 75
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 3/69 (4%)
Query: 17 MLPTKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV---LQVIRG 73
M ++ P LP GW+R+ V R G + G+ DV+ Y+P GKK R+R+E+ I
Sbjct: 1 MFTESPLFDDPSLPTGWHRKVVQRQTGATAGQWDVYVYNPEGKKFRSRNELRTHFNQIGS 60
Query: 74 NIPGVSFDF 82
+ FDF
Sbjct: 61 TMNSEDFDF 69
>gi|395546804|ref|XP_003775127.1| PREDICTED: uncharacterized protein LOC100923299 [Sarcophilus
harrisii]
Length = 488
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRS 84
+CP L PGW R E R G + G+ D +Y SP G+++R++ E+ + + + FDF+
Sbjct: 7 DCPVLGPGWKRRESFRKSGATCGRSDTYYQSPTGERIRSKVELRRFLGPDCDLSRFDFKR 66
Query: 85 GKLNSL 90
G L L
Sbjct: 67 GVLQYL 72
>gi|327263796|ref|XP_003216703.1| PREDICTED: hypothetical protein LOC100553494 [Anolis
carolinensis]
Length = 207
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 38/66 (57%)
Query: 20 TKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVS 79
T+ +CP L PGW R +V R G G+ D +Y SP G+K+R+R E+ +++ +
Sbjct: 2 TEGWIDCPSLGPGWKRRQVLRKNGTRPGQSDTYYMSPRGEKIRSRVELTKLLGCSRDLTD 61
Query: 80 FDFRSG 85
F F+ G
Sbjct: 62 FHFKKG 67
>gi|91079510|ref|XP_969537.1| PREDICTED: similar to methyl-cpg binding protein [Tribolium
castaneum]
gi|270004424|gb|EFA00872.1| hypothetical protein TcasGA2_TC003775 [Tribolium castaneum]
Length = 200
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 8/87 (9%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNI----- 75
K +YEC LP W RE++ R G+SVGKVDV YYS + +R + ++ IR
Sbjct: 7 KTKYECAALPKRWQREDMLRKTGISVGKVDVMYYS---RGVRNDASLVPPIRQTASIFKQ 63
Query: 76 PGVSFDFRSGKLNSLQKHRNKQRGNQF 102
P + + K+ S K+ N+++ Q
Sbjct: 64 PVTVYKTQESKVKSDYKNGNQEKPKQL 90
>gi|345320312|ref|XP_003430271.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein
1-like [Ornithorhynchus anatinus]
Length = 595
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFR 83
+CP L PGW R E R G + G+ D +Y SP G++ R++ E+ + + + FDF+
Sbjct: 6 MDCPALGPGWKRRESFRKSGATCGRTDTYYQSPTGERFRSKIELTRFLGPDQDLSLFDFK 65
Query: 84 SG 85
+G
Sbjct: 66 NG 67
>gi|198454368|ref|XP_001359567.2| GA20899, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198132763|gb|EAL28716.2| GA20899, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 343
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 18/85 (21%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVG--------------KVDVFYYSPCGKKLRTRSE 66
+KR +C LP GW R+E ++ S KVDVFYYSP GK++ + +
Sbjct: 11 RKRVDCSVLPKGWQRDEGRKSGSSSCATTTNSSSISSNNNNKVDVFYYSPTGKRIEGKQQ 70
Query: 67 VLQVIRGNIPGVSFDFRSGKLNSLQ 91
+V SFDF+SGKL Q
Sbjct: 71 GGEVFDIG----SFDFQSGKLQQRQ 91
>gi|195153140|ref|XP_002017487.1| GL22327 [Drosophila persimilis]
gi|194112544|gb|EDW34587.1| GL22327 [Drosophila persimilis]
Length = 343
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 42/85 (49%), Gaps = 18/85 (21%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVG--------------KVDVFYYSPCGKKLRTRSE 66
+KR +C LP GW R+E ++ S KVDVFYYSP GK++ + +
Sbjct: 11 RKRVDCSVLPKGWQRDEGRKSGSSSCATTTNSSSISSNNNNKVDVFYYSPTGKRVEGKQQ 70
Query: 67 VLQVIRGNIPGVSFDFRSGKLNSLQ 91
+V SFDF+SGKL Q
Sbjct: 71 GGEVFDIG----SFDFQSGKLQQRQ 91
>gi|405960128|gb|EKC26075.1| Methyl-CpG-binding domain protein 4 [Crassostrea gigas]
Length = 826
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 4/59 (6%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIR----GNIPGVSFDF 82
QLP GW R+ V R G S GK DV+ YSP G+KLR+++++ + + + FDF
Sbjct: 188 QLPKGWTRKVVQRLSGKSAGKYDVYIYSPSGRKLRSKTDLARYLEEEGITELTADDFDF 246
>gi|89271297|emb|CAJ82703.1| l-CpG binding domain protein 1 [Xenopus (Silurana) tropicalis]
Length = 380
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV---LQVIRGNIPGVSFD 81
E P L PGW R R G+S G D +Y SP G+K+R+R E+ + ++ FD
Sbjct: 7 EWPLLGPGWKRRIAVRKSGVSCGHTDTYYKSPTGEKIRSRIELAKYFNALGSSVDLTLFD 66
Query: 82 FRSG 85
FR+G
Sbjct: 67 FRNG 70
>gi|256076205|ref|XP_002574404.1| methyl-cpg binding protein mbd [Schistosoma mansoni]
gi|339776687|gb|AEK05283.1| methyl-CpG binding domain protein [Schistosoma mansoni]
gi|350646128|emb|CCD59175.1| methyl-cpg binding protein, mbd, putative [Schistosoma mansoni]
Length = 314
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVS-FDFRSGKL 87
LP GW REE R GL GK DV+Y SP + +R + E +Q I G+ + FD+R GK
Sbjct: 47 LPTGWRREECMRPNGLGTGKSDVYYISPQNQIVRNKQE-MQTILGDKYDIGLFDWRMGKF 105
>gi|51703367|gb|AAH80900.1| mbd1 protein [Xenopus (Silurana) tropicalis]
Length = 640
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV---LQVIRGNIPGVSFD 81
E P L PGW R R G+S G D +Y SP G+K+R+R E+ + ++ FD
Sbjct: 15 EWPLLGPGWKRRIAVRKSGVSCGHTDTYYKSPTGEKIRSRIELAKYFDALGSSVDLTLFD 74
Query: 82 FRSG 85
FR+G
Sbjct: 75 FRNG 78
>gi|443723537|gb|ELU11914.1| hypothetical protein CAPTEDRAFT_102897, partial [Capitella
teleta]
Length = 205
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
LPPGW R+ R G S GK DV+ +SP GKK R+R+++ + N
Sbjct: 8 LPPGWTRKVTQRQMGKSAGKYDVYIFSPSGKKFRSRTDLASWVEKN 53
>gi|301628286|ref|XP_002943288.1| PREDICTED: methyl-CpG-binding domain protein 1 [Xenopus
(Silurana) tropicalis]
Length = 601
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%), Gaps = 3/64 (4%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV---LQVIRGNIPGVSFD 81
E P L PGW R R G+S G D +Y SP G+K+R+R E+ + ++ FD
Sbjct: 7 EWPLLGPGWKRRIAVRKSGVSCGHTDTYYKSPTGEKIRSRIELAKYFNALGSSVDLTLFD 66
Query: 82 FRSG 85
FR+G
Sbjct: 67 FRNG 70
>gi|256076207|ref|XP_002574405.1| methyl-cpg binding protein mbd [Schistosoma mansoni]
gi|350646129|emb|CCD59176.1| methyl-cpg binding protein, mbd, putative [Schistosoma mansoni]
Length = 246
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 35/60 (58%), Gaps = 2/60 (3%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVS-FDFRSGKL 87
LP GW REE R GL GK DV+Y SP + +R + E +Q I G+ + FD+R GK
Sbjct: 47 LPTGWRREECMRPNGLGTGKSDVYYISPQNQIVRNKQE-MQTILGDKYDIGLFDWRMGKF 105
>gi|380798351|gb|AFE71051.1| methyl-CpG-binding domain protein 3, partial [Macaca mulatta]
Length = 264
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 37/53 (69%)
Query: 46 VGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
G DVFYYSP GKK R++ ++ + + G++ +FDFR+GK+ + ++++QR
Sbjct: 1 AGHRDVFYYSPSGKKFRSKPQLARYLGGSMDLSTFDFRTGKMLMSKMNKSRQR 53
>gi|260781241|ref|XP_002585728.1| hypothetical protein BRAFLDRAFT_119982 [Branchiostoma floridae]
gi|229270764|gb|EEN41739.1| hypothetical protein BRAFLDRAFT_119982 [Branchiostoma floridae]
Length = 858
Score = 48.5 bits (114), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/71 (40%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRG---NIPGVSFDFRSG 85
LP GW ++ V R G S GK D ++YSP GKK R+R+E+ + + I SF F G
Sbjct: 86 LPKGWTKKVVLRQSGASAGKTDTYFYSPEGKKFRSRTEIAKYCKDKGLKIDTDSFTF-GG 144
Query: 86 KLNSLQKHRNK 96
K+ S K K
Sbjct: 145 KVTSSAKKAAK 155
>gi|297793491|ref|XP_002864630.1| hypothetical protein ARALYDRAFT_919168 [Arabidopsis lyrata subsp.
lyrata]
gi|297310465|gb|EFH40889.1| hypothetical protein ARALYDRAFT_919168 [Arabidopsis lyrata subsp.
lyrata]
Length = 233
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSP-CGKKLRTRSEVL 68
LPPGW E+ R G + G VD +YY P G+K R+R+EVL
Sbjct: 88 LPPGWRVEDKIRTSGATAGSVDKYYYEPNTGRKFRSRTEVL 128
>gi|15238389|ref|NP_200746.1| methyl-CPG-binding domain 6 protein [Arabidopsis thaliana]
gi|75180469|sp|Q9LTJ1.1|MBD6_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 6;
Short=AtMBD6; Short=MBD06; AltName:
Full=Methyl-CpG-binding protein MBD6
gi|8885544|dbj|BAA97474.1| unnamed protein product [Arabidopsis thaliana]
gi|28416643|gb|AAO42852.1| At5g59380 [Arabidopsis thaliana]
gi|110743343|dbj|BAE99559.1| hypothetical protein [Arabidopsis thaliana]
gi|332009795|gb|AED97178.1| methyl-CPG-binding domain 6 protein [Arabidopsis thaliana]
Length = 225
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 27/41 (65%), Gaps = 1/41 (2%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSP-CGKKLRTRSEVL 68
LPPGW E+ R G + G VD +YY P G+K R+R+EVL
Sbjct: 81 LPPGWRVEDKIRTSGATAGSVDKYYYEPNTGRKFRSRTEVL 121
>gi|323450793|gb|EGB06672.1| hypothetical protein AURANDRAFT_65286 [Aureococcus anophagefferens]
Length = 1993
Score = 47.8 bits (112), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 3/44 (6%)
Query: 31 PGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
PGWYRE V R G KVD +YY P G +LR+R +V + GN
Sbjct: 1000 PGWYRELVPRRSG---DKVDAYYYPPDGTQLRSRPDVRRYFEGN 1040
>gi|449671060|ref|XP_002167440.2| PREDICTED: methyl-CpG-binding domain protein 2-like [Hydra
magnipapillata]
Length = 221
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 27/50 (54%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQV 70
K R C LP GW +E V R G S GK DV+YYS + T S +L V
Sbjct: 3 KIRTSCSNLPTGWVKEVVIRKSGASAGKSDVYYYSSLKENDSTYSRLLDV 52
>gi|242005031|ref|XP_002423378.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212506422|gb|EEB10640.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 81
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
L GW R EVTR G+ GK D++ +SP G K R++ E++ + N
Sbjct: 7 HLKDGWKRVEVTRKNGVYAGKADIYIFSPDGNKFRSKKELVNYLAAN 53
>gi|334821934|gb|AEG90859.1| methyl-CpG-binding domain protein 2 [Apostichopus japonicus]
Length = 95
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 18 LPTKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKL 61
L +K +C LP GW REEV R GLS GK D++Y+ GK+L
Sbjct: 1 LEKRKIQDCLGLPTGWKREEVIRKSGLSAGKTDIYYFR-SGKQL 43
>gi|156365579|ref|XP_001626722.1| predicted protein [Nematostella vectensis]
gi|156213609|gb|EDO34622.1| predicted protein [Nematostella vectensis]
Length = 223
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/33 (57%), Positives = 22/33 (66%)
Query: 23 RYECPQLPPGWYREEVTRNKGLSVGKVDVFYYS 55
R CP LP GW RE V R G+S G+ DV+YYS
Sbjct: 7 RVTCPSLPKGWLREIVLRKSGVSAGRSDVYYYS 39
>gi|26349999|dbj|BAC38639.1| unnamed protein product [Mus musculus]
Length = 102
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 33/49 (67%)
Query: 50 DVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
DV+Y+SP GKK R++ ++ + + + SFDFR+GK+ + +NKQR
Sbjct: 32 DVYYFSPSGKKFRSKPQLARYLGNAVDLSSFDFRTGKMMPSKLQKNKQR 80
>gi|291236887|ref|XP_002738372.1| PREDICTED: methyl-CpG binding domain protein 4-like [Saccoglossus
kowalevskii]
Length = 862
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 37/82 (45%), Gaps = 18/82 (21%)
Query: 4 NDSPLSLVSNLLKMLPTKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRT 63
NDSPL E LP GW R+ V R G S GK DV+ SP GKK R+
Sbjct: 320 NDSPL---------------LEDTTLPEGWTRKVVQRKSGKSAGKYDVYILSPEGKKYRS 364
Query: 64 RSEVLQV---IRGNIPGVSFDF 82
R E+ + ++ FDF
Sbjct: 365 RIELAALFMKTNSDLKCSQFDF 386
>gi|358248398|ref|NP_001239875.1| uncharacterized protein LOC100802350 [Glycine max]
gi|255641529|gb|ACU21038.1| unknown [Glycine max]
Length = 177
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 8/66 (12%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN--IPGVS---FD 81
P+ P G+ R V R K+D +Y +P GKKLRTR+E+ ++ N GVS FD
Sbjct: 89 PKTPQGFKRSLVLRK---DYSKLDAYYITPAGKKLRTRNEIAAFLKDNPEFKGVSASDFD 145
Query: 82 FRSGKL 87
F S K+
Sbjct: 146 FSSPKI 151
>gi|356535711|ref|XP_003536387.1| PREDICTED: methyl-CpG-binding domain-containing protein 4-like
[Glycine max]
Length = 193
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 8/66 (12%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN--IPGVS---FD 81
P+ P G+ R V R K+D +Y +P GKKLRTR+E+ ++ N GVS FD
Sbjct: 105 PKTPQGFKRSLVLRK---DYSKLDAYYITPAGKKLRTRNEIAAFLKDNPEFKGVSASDFD 161
Query: 82 FRSGKL 87
F S K+
Sbjct: 162 FSSPKI 167
>gi|213982783|ref|NP_001135563.1| methyl CpG binding protein 2 (Rett syndrome) [Xenopus (Silurana)
tropicalis]
gi|195539664|gb|AAI68054.1| Unknown (protein for MGC:185616) [Xenopus (Silurana) tropicalis]
Length = 466
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
YE P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 96 YEDPTLPEGWTRKLKQRKSGRSAGKFDVYLINPNGKAFRSKVELI 140
>gi|147907162|ref|NP_001081854.1| methyl CpG binding protein 2 (Rett syndrome) [Xenopus laevis]
gi|4105999|gb|AAD02651.1| methyl-CpG-binding protein 2 [Xenopus laevis]
gi|4139226|gb|AAD03736.1| methyl-CpG-binding protein MeCP2 [Xenopus laevis]
Length = 467
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
YE P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 96 YEDPTLPEGWTRKLKQRKSGRSAGKFDVYLINPNGKAFRSKVELI 140
>gi|444517319|gb|ELV11493.1| Host cell factor 1, partial [Tupaia chinensis]
Length = 3434
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 86 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 130
>gi|327280386|ref|XP_003224933.1| PREDICTED: methyl-CpG-binding domain protein 4-like [Anolis
carolinensis]
Length = 530
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVSFDFRS 84
+P GW R R G + GK D+++ SP GKKLR++ +L + N + FDF +
Sbjct: 65 VPEGWERIVKQRQAGKTAGKYDIYFVSPQGKKLRSKHALLDYFKKNRETGLKLEDFDFTT 124
Query: 85 GKLNSLQKHR 94
N+ Q+ +
Sbjct: 125 SVQNNKQRTK 134
>gi|412988901|emb|CCO15492.1| predicted protein [Bathycoccus prasinos]
Length = 872
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 12 SNLLKMLPTKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVI 71
+ +L+ L E L PGW TR G + G D +Y+SP G+KLR+++EV++ +
Sbjct: 6 TKVLQKLRNDLEREGFHLAPGWRVAIETRKSGATKGGTDKYYFSPDGRKLRSKTEVMRFL 65
>gi|115725067|ref|XP_783908.2| PREDICTED: uncharacterized protein LOC578658 [Strongylocentrotus
purpuratus]
Length = 550
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFDF 82
LP GW R+ R G S GK DV+ SP GK+LR+ EV + + N S DF
Sbjct: 137 LPTGWTRKITERMSGASAGKFDVYLTSPEGKRLRSMKEVADHLEKTNSTYTSADF 191
>gi|383617611|gb|AFH41803.1| Y-linked methyl CpG binding protein 2, partial [Monodelphis
domestica]
Length = 163
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
YE P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 97 YEDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAXRSKVELI 141
>gi|302779886|ref|XP_002971718.1| hypothetical protein SELMODRAFT_38000 [Selaginella moellendorffii]
gi|300160850|gb|EFJ27467.1| hypothetical protein SELMODRAFT_38000 [Selaginella moellendorffii]
Length = 141
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
P+ P GW R+ V R++G S D++Y SPCGKKLR+ EV + + +
Sbjct: 72 PKTPAGWKRDFVIRSEGCSRFG-DIYYISPCGKKLRSMVEVAKFLEDH 118
>gi|302819820|ref|XP_002991579.1| hypothetical protein SELMODRAFT_429893 [Selaginella moellendorffii]
gi|300140612|gb|EFJ07333.1| hypothetical protein SELMODRAFT_429893 [Selaginella moellendorffii]
Length = 335
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 1/48 (2%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
P+ P GW R+ V R++G S D++Y SPCGKKLR+ EV + + +
Sbjct: 120 PKTPAGWKRDFVIRSEGCSRFG-DIYYISPCGKKLRSMVEVAKFLEDH 166
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
P +P GW RE + R G S DV+Y SPC ++R+ ++ + + N
Sbjct: 243 PPVPRGWIREIILRGSG-SSRLCDVYYLSPCQARIRSLPDMNEFLHQN 289
>gi|195393748|ref|XP_002055515.1| GJ18751 [Drosophila virilis]
gi|194150025|gb|EDW65716.1| GJ18751 [Drosophila virilis]
Length = 1063
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 46/90 (51%), Gaps = 11/90 (12%)
Query: 15 LKMLPTKKRYECPQLPPGWYREEVTRNKG-LSVGKVDVFYYSPCGKKLRTRSEVLQVIRG 73
K+ PT + Y P GW RE V R+ LS + DV + SP GKKLR+R +++ ++ G
Sbjct: 266 FKLHPTDEFYRLP-FKYGWKRELVLRSSASLSRQRGDVIFISPGGKKLRSREDIVPLLNG 324
Query: 74 NIPGVSFDFRSGKLNSLQKHRNKQRGNQFE 103
+ F F + + +Q G +FE
Sbjct: 325 ELTIDHFCF---------QRQMQQVGEEFE 345
>gi|297815816|ref|XP_002875791.1| hypothetical protein ARALYDRAFT_485028 [Arabidopsis lyrata subsp.
lyrata]
gi|297321629|gb|EFH52050.1| hypothetical protein ARALYDRAFT_485028 [Arabidopsis lyrata subsp.
lyrata]
Length = 181
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSP-CGKKLRTRSEVLQVIRGNIP 76
LPP W E R G G VD FYY P G+K R+++EVL + P
Sbjct: 35 LPPDWRTEVRVRTSGTKAGTVDKFYYEPITGRKFRSKNEVLYYLEHGAP 83
>gi|119593164|gb|EAW72758.1| methyl CpG binding protein 2 (Rett syndrome), isoform CRA_b [Homo
sapiens]
Length = 154
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|294487675|gb|ADE87881.1| truncated methyl CpG binding protein 2 transcript 1 [Homo sapiens]
Length = 173
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|15232591|ref|NP_190242.1| methyl-CPG-binding domain protein 5 [Arabidopsis thaliana]
gi|75206905|sp|Q9SNC0.1|MBD5_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 5;
Short=AtMBD5; Short=MBD05; AltName:
Full=Methyl-CpG-binding protein MBD5
gi|6523061|emb|CAB62328.1| putative protein [Arabidopsis thaliana]
gi|17380750|gb|AAL36205.1| unknown protein [Arabidopsis thaliana]
gi|23296870|gb|AAN13191.1| unknown protein [Arabidopsis thaliana]
gi|332644653|gb|AEE78174.1| methyl-CPG-binding domain protein 5 [Arabidopsis thaliana]
Length = 182
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSP-CGKKLRTRSEVLQVIRGNIP 76
LPP W E R G G VD FYY P G+K R+++EVL + P
Sbjct: 35 LPPDWRTEIRVRTSGTKAGTVDKFYYEPITGRKFRSKNEVLYYLEHGTP 83
>gi|21554707|gb|AAM63666.1| unknown [Arabidopsis thaliana]
Length = 182
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSP-CGKKLRTRSEVLQVIRGNIP 76
LPP W E R G G VD FYY P G+K R+++EVL + P
Sbjct: 35 LPPDWRTEIRVRTSGTKAGTVDKFYYEPITGRKFRSKNEVLYYLEHGTP 83
>gi|344235976|gb|EGV92079.1| Methyl-CpG-binding protein 2 [Cricetulus griseus]
Length = 203
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|305861203|gb|ADM72855.1| mutant methyl CpG binding protein 2 [Homo sapiens]
Length = 271
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|188036229|pdb|3C2I|A Chain A, The Crystal Structure Of Methyl-Cpg Binding Domain Of
Human Mecp2 In Complex With A Methylated Dna Sequence
From Bdnf
Length = 97
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 19 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 63
>gi|339242099|ref|XP_003376975.1| putative bromodomain protein [Trichinella spiralis]
gi|316974284|gb|EFV57780.1| putative bromodomain protein [Trichinella spiralis]
Length = 1670
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%)
Query: 32 GWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
GW R+ V R+ S + DV YY+PCGK+L + EV++ +R N
Sbjct: 542 GWRRQTVIRHISASGIRGDVLYYAPCGKRLGSYVEVMRYLRKN 584
>gi|242016236|ref|XP_002428735.1| methyl-cpg binding protein, mbd, putative [Pediculus humanus
corporis]
gi|212513420|gb|EEB15997.1| methyl-cpg binding protein, mbd, putative [Pediculus humanus
corporis]
Length = 200
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 25/39 (64%)
Query: 17 MLPTKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYS 55
M K+RY+ + W R+++ R + LS GKVD++YYS
Sbjct: 1 MSSDKRRYDSTSISKSWARDDIMRKQTLSSGKVDIYYYS 39
>gi|295651477|gb|ADG26557.1| mutant methyl CpG binding protein 2 [Homo sapiens]
Length = 286
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|157879779|pdb|1QK9|A Chain A, The Solution Structure Of The Domain From Mecp2 That
Binds To Methylated Dna
Length = 92
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 19 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 63
>gi|355701648|gb|AES01751.1| methyl CpG binding protein 2 [Mustela putorius furo]
Length = 414
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|351712909|gb|EHB15828.1| Methyl-CpG-binding protein 2 [Heterocephalus glaber]
Length = 443
Score = 42.7 bits (99), Expect = 0.030, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 116 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 160
>gi|62204887|gb|AAH93116.1| Mecp2 protein [Danio rerio]
Length = 523
Score = 42.4 bits (98), Expect = 0.031, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
YE P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 103 YEDPSLPQGWTRKLKQRKSGRSAGKFDVYLINPEGKAFRSKVELM 147
>gi|47086573|ref|NP_997901.1| methyl-CpG-binding protein 2 [Danio rerio]
gi|37574906|gb|AAP57248.2| methyl-cytosine binding protein 2 [Danio rerio]
Length = 524
Score = 42.4 bits (98), Expect = 0.032, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
YE P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 104 YEDPSLPQGWTRKLKQRKSGRSAGKFDVYLINPEGKAFRSKVELM 148
>gi|431904346|gb|ELK09737.1| Methyl-CpG-binding protein 2 [Pteropus alecto]
Length = 427
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 94 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 138
>gi|242013163|ref|XP_002427284.1| methyl-cpg-binding protein, putative [Pediculus humanus corporis]
gi|212511625|gb|EEB14546.1| methyl-cpg-binding protein, putative [Pediculus humanus corporis]
Length = 714
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 23 RYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVI---RGNIPGVS 79
+++ P LPPGW R R+ G S G+++V SP GK+ R++ ++ I + N
Sbjct: 475 KFKDPTLPPGWKRCIKIRSCGKSAGRMEVIIVSPDGKRHRSKKQLENYILKNKLNFNSED 534
Query: 80 FDF 82
FDF
Sbjct: 535 FDF 537
>gi|159163105|pdb|1UB1|A Chain A, Solution Structure Of The Matrix Attachment
Region-Binding Domain Of Chicken Mecp2
Length = 133
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 33 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 77
>gi|306450689|gb|ADM88591.1| methyl CpG binding protein 2 transcript variant 1 [Homo sapiens]
Length = 397
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|2388805|emb|CAA74577.1| attachment region binding protein [Gallus gallus]
Length = 344
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 96 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 140
>gi|440799087|gb|ELR20148.1| MethylCpG binding domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 691
Score = 42.4 bits (98), Expect = 0.035, Method: Composition-based stats.
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 1/40 (2%)
Query: 29 LPPGWYREEVTRNKGLSVG-KVDVFYYSPCGKKLRTRSEV 67
L GW RE VTR G + + DV+Y++P GKKLR+R EV
Sbjct: 225 LRAGWTREVVTRQSGATAKIRKDVYYHAPDGKKLRSRVEV 264
>gi|301786889|ref|XP_002928858.1| PREDICTED: methyl-CpG-binding protein 2-like [Ailuropoda
melanoleuca]
Length = 483
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|195134773|ref|XP_002011811.1| GI14405 [Drosophila mojavensis]
gi|193909065|gb|EDW07932.1| GI14405 [Drosophila mojavensis]
Length = 1040
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 32 GWYREEVTR-NKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFR 83
GW RE V R N +S + DV + SP GKKLR+R +++ +++G + F F+
Sbjct: 265 GWKRELVLRSNASVSRQRGDVIFVSPGGKKLRSREDIIPLLKGELTIDHFCFQ 317
>gi|332374762|gb|AEE62522.1| unknown [Dendroctonus ponderosae]
Length = 205
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNI----- 75
K +YEC QLP +EE+ R GL V KVDV+Y + + +R+ + ++ IR
Sbjct: 12 KTKYECAQLPKRISKEEMLRKSGLQVNKVDVYYGN---RTMRSDASLVPPIRQTASIFKQ 68
Query: 76 PGVSFDFRSGKLNSLQKHRNKQRGNQF 102
P + + G+ + KH +++ Q
Sbjct: 69 PVTVYKTQEGQARADCKHGTQEKPKQL 95
>gi|332022570|gb|EGI62872.1| Bromodomain adjacent to zinc finger domain protein 2B [Acromyrmex
echinatior]
Length = 2202
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 6/77 (7%)
Query: 16 KMLPTKKRYECPQLPPGWYREEVTRNKGLS-VGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
K+ P+++ + P L GW RE V + G + V K DV YYSPCGK R+ ++++ +
Sbjct: 545 KLKPSERDLQMP-LERGWKRETVIKGLGKTGVIKGDVSYYSPCGKTFRSSPDLVKFLEHQ 603
Query: 75 IPG----VSFDFRSGKL 87
P +F F S L
Sbjct: 604 NPAELTTANFSFSSRPL 620
>gi|449016928|dbj|BAM80330.1| unknown homeobox protein [Cyanidioschyzon merolae strain 10D]
Length = 818
Score = 42.4 bits (98), Expect = 0.038, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVI 71
LPPGW EE R G G++D Y SP G+K R+ EV + +
Sbjct: 774 LPPGWRLEEQIRKGGSLAGRIDRVYVSPDGRKFRSLKEVARFL 816
>gi|281341235|gb|EFB16819.1| hypothetical protein PANDA_018915 [Ailuropoda melanoleuca]
Length = 474
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 86 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 130
>gi|190576571|gb|ACE79061.1| methyl CpG binding protein 2 isoform 2 (predicted) [Sorex araneus]
Length = 478
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 87 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 131
>gi|334350137|ref|XP_001379261.2| PREDICTED: methyl-CpG-binding protein 2-like [Monodelphis
domestica]
Length = 628
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 223 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 267
>gi|14149645|ref|NP_034918.1| methyl-CpG-binding protein 2 isoform 2 [Mus musculus]
gi|12585281|sp|Q9Z2D6.1|MECP2_MOUSE RecName: Full=Methyl-CpG-binding protein 2; Short=MeCp-2 protein;
Short=MeCp2
gi|6959310|gb|AAF33024.1|AF158181_1 methyl CpG binding protein 2 [Mus musculus]
gi|3800811|gb|AAC68880.1| methyl-CpG binding protein 2 [Mus musculus]
gi|5419962|emb|CAB46495.1| methyl-CpG-binding protein 2 [Mus musculus]
gi|20072600|gb|AAH27153.1| Methyl CpG binding protein 2 [Mus musculus]
gi|148697898|gb|EDL29845.1| methyl CpG binding protein 2 [Mus musculus]
Length = 484
Score = 42.4 bits (98), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|417401778|gb|JAA47757.1| Putative methyl-cpg binding transcription regulator [Desmodus
rotundus]
Length = 486
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|330864700|ref|NP_001193481.1| methyl-CpG-binding protein 2 [Bos taurus]
Length = 486
Score = 42.0 bits (97), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|432097786|gb|ELK27822.1| Methyl-CpG-binding protein 2 [Myotis davidii]
Length = 428
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 107 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 151
>gi|327264237|ref|XP_003216921.1| PREDICTED: methyl-CpG-binding protein 2-like [Anolis carolinensis]
Length = 778
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 394 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 438
>gi|126517469|ref|NP_001075448.1| methyl-CpG-binding protein 2 isoform 1 [Mus musculus]
Length = 501
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 112 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 156
>gi|266521|sp|Q00566.1|MECP2_RAT RecName: Full=Methyl-CpG-binding protein 2; Short=MeCp-2 protein;
Short=MeCp2
gi|205362|gb|AAA41584.1| MeCP-2 [Rattus norvegicus]
Length = 492
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|149029883|gb|EDL84995.1| methyl CpG binding protein 2 [Rattus norvegicus]
Length = 492
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|440894037|gb|ELR46603.1| Methyl-CpG-binding protein 2, partial [Bos grunniens mutus]
Length = 456
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 86 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 130
>gi|115312278|ref|NP_073164.2| methyl-CpG-binding protein 2 [Rattus norvegicus]
gi|114225272|gb|ABI55238.1| methyl CpG binding protein 2 isoform e2 [Rattus norvegicus]
Length = 492
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|74008801|ref|XP_853488.1| PREDICTED: methyl-CpG-binding protein 2 isoform 1 [Canis lupus
familiaris]
Length = 486
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|345326255|ref|XP_001508704.2| PREDICTED: methyl-CpG-binding protein 2-like [Ornithorhynchus
anatinus]
Length = 459
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 156 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 200
>gi|311277211|ref|XP_003135541.1| PREDICTED: methyl-CpG-binding protein 2-like [Sus scrofa]
Length = 479
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|345807369|ref|XP_003435601.1| PREDICTED: methyl-CpG-binding protein 2 [Canis lupus familiaris]
Length = 498
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 107 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 151
>gi|262089225|gb|ACY24448.1| methyl CpG binding protein 2 isoform 1 [Homo sapiens]
Length = 486
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|74177432|dbj|BAE34602.1| unnamed protein product [Mus musculus]
Length = 501
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 112 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 156
>gi|320006185|gb|ADW01220.1| mutant methyl CpG binding protein 2 variant 1 [Homo sapiens]
Length = 511
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|184185496|gb|ACC68899.1| methyl-CpG-binding protein 2 (predicted) [Rhinolophus
ferrumequinum]
Length = 486
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|149758807|ref|XP_001494268.1| PREDICTED: methyl-CpG-binding protein 2-like [Equus caballus]
Length = 486
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|403306887|ref|XP_003943950.1| PREDICTED: methyl-CpG-binding protein 2 [Saimiri boliviensis
boliviensis]
Length = 486
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|303275850|ref|XP_003057219.1| methyl binding domain protein [Micromonas pusilla CCMP1545]
gi|226461571|gb|EEH58864.1| methyl binding domain protein [Micromonas pusilla CCMP1545]
Length = 293
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 3/45 (6%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVI 71
P P GW RE + R L D +YYSPCGK++R++ +V + +
Sbjct: 132 PAPPEGWRREVIPRRSTLGA---DAYYYSPCGKRMRSKPDVQRFL 173
>gi|410989629|ref|XP_004001061.1| PREDICTED: methyl-CpG-binding protein 2 [Felis catus]
Length = 486
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|383873280|ref|NP_001244471.1| methyl-CpG-binding protein 2 [Macaca mulatta]
gi|296236737|ref|XP_002763455.1| PREDICTED: methyl-CpG-binding protein 2 isoform 2 [Callithrix
jacchus]
gi|50401118|sp|Q95LG8.1|MECP2_MACFA RecName: Full=Methyl-CpG-binding protein 2; Short=MeCp-2 protein;
Short=MeCp2
gi|15419706|gb|AAK97131.1|AF295597_1 methyl-CpG-binding protein 2 [Macaca fascicularis]
gi|167045815|gb|ABZ10483.1| methyl CpG binding protein 2 isoform 1 (predicted) [Callithrix
jacchus]
gi|380812854|gb|AFE78301.1| methyl-CpG-binding protein 2 isoform 1 [Macaca mulatta]
gi|383411395|gb|AFH28911.1| methyl-CpG-binding protein 2 isoform 1 [Macaca mulatta]
gi|384947100|gb|AFI37155.1| methyl-CpG-binding protein 2 isoform 1 [Macaca mulatta]
Length = 486
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|395545788|ref|XP_003774780.1| PREDICTED: methyl-CpG-binding protein 2 [Sarcophilus harrisii]
Length = 530
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 133 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 177
>gi|170649629|gb|ACB21216.1| methyl-CpG-binding protein 2 (predicted) [Callicebus moloch]
Length = 486
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|284004980|ref|NP_001164841.1| methyl-CpG-binding protein 2 [Oryctolagus cuniculus]
gi|217418267|gb|ACK44271.1| methyl CpG binding protein 2 isoform 2 (predicted) [Oryctolagus
cuniculus]
Length = 497
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 107 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 151
>gi|114225270|gb|ABI55237.1| methyl CpG binding protein 2 isoform e1 [Rattus norvegicus]
Length = 520
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 123 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 167
>gi|4826830|ref|NP_004983.1| methyl-CpG-binding protein 2 isoform 1 [Homo sapiens]
gi|397466230|ref|XP_003804868.1| PREDICTED: methyl-CpG-binding protein 2 [Pan paniscus]
gi|1708973|sp|P51608.1|MECP2_HUMAN RecName: Full=Methyl-CpG-binding protein 2; Short=MeCp-2 protein;
Short=MeCp2
gi|6959308|gb|AAF33023.1|AF158180_1 methyl CpG binding protein 2 [Homo sapiens]
gi|972765|gb|AAC32737.1| methyl-CpG-binding protein [Homo sapiens]
gi|1934902|emb|CAA73190.1| methyl-CpG binding protein 2 [Homo sapiens]
gi|3002591|gb|AAC08757.1| Methyl-CpG binding protein 2 [Homo sapiens]
gi|5419677|emb|CAB46446.1| Methyl-CpG-binding protein 2 [Homo sapiens]
gi|15079580|gb|AAH11612.1| Methyl CpG binding protein 2 (Rett syndrome) [Homo sapiens]
gi|117646640|emb|CAL37435.1| hypothetical protein [synthetic construct]
gi|119593163|gb|EAW72757.1| methyl CpG binding protein 2 (Rett syndrome), isoform CRA_a [Homo
sapiens]
gi|123982072|gb|ABM82865.1| methyl CpG binding protein 2 (Rett syndrome) [synthetic construct]
gi|157928322|gb|ABW03457.1| methyl CpG binding protein 2 (Rett syndrome) [synthetic construct]
gi|208966764|dbj|BAG73396.1| methyl CpG binding protein 2 [synthetic construct]
gi|289719650|gb|ADD17354.1| methyl CpG binding protein 2 [Homo sapiens]
gi|300518924|gb|ADK25711.1| mutant methyl CpG binding protein 2 transcript 1 [Homo sapiens]
gi|410223132|gb|JAA08785.1| methyl CpG binding protein 2 (Rett syndrome) [Pan troglodytes]
gi|410253214|gb|JAA14574.1| methyl CpG binding protein 2 (Rett syndrome) [Pan troglodytes]
gi|410297368|gb|JAA27284.1| methyl CpG binding protein 2 (Rett syndrome) [Pan troglodytes]
gi|410342699|gb|JAA40296.1| methyl CpG binding protein 2 (Rett syndrome) [Pan troglodytes]
Length = 486
Score = 42.0 bits (97), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|294487881|gb|ADE87882.1| methyl CpG binding protein 2 transcript 1 [Homo sapiens]
Length = 486
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|2246416|emb|CAA68001.1| methyl-CpG-binding protein 2 [Homo sapiens]
Length = 486
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|348552818|ref|XP_003462224.1| PREDICTED: methyl-CpG-binding protein 2-like [Cavia porcellus]
Length = 532
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 123 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 167
>gi|402911862|ref|XP_003918522.1| PREDICTED: methyl-CpG-binding protein 2 isoform 1 [Papio anubis]
Length = 486
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|395860609|ref|XP_003802603.1| PREDICTED: methyl-CpG-binding protein 2 [Otolemur garnettii]
Length = 498
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 107 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 151
>gi|242350739|gb|ACS92726.1| mutant methyl CpG binding protein 2 transcript variant 1 [Homo
sapiens]
Length = 486
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|158259911|dbj|BAF82133.1| unnamed protein product [Homo sapiens]
Length = 486
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|1752668|emb|CAA64331.1| methyl-CpG-binding protein [Homo sapiens]
Length = 477
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 86 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 130
>gi|427795843|gb|JAA63373.1| Putative bromodomain adjacent to zinc finger domain protein 2b,
partial [Rhipicephalus pulchellus]
Length = 1933
Score = 42.0 bits (97), Expect = 0.050, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 20 TKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
T +R L GW R+ + + G S K +V Y +PCGKKLR+ EVL+ ++ N
Sbjct: 301 TNEREARIPLERGWQRQTIIHSYGKSGVKGEVIYIAPCGKKLRSYPEVLKYLQQN 355
>gi|402911864|ref|XP_003918523.1| PREDICTED: methyl-CpG-binding protein 2 isoform 2 [Papio anubis]
Length = 498
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 107 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 151
>gi|355705284|gb|EHH31209.1| hypothetical protein EGK_21097, partial [Macaca mulatta]
Length = 477
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 86 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 130
>gi|31874179|emb|CAD97991.1| hypothetical protein [Homo sapiens]
Length = 516
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 125 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 169
>gi|355757820|gb|EHH61345.1| hypothetical protein EGM_19341, partial [Macaca fascicularis]
Length = 477
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 86 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 130
>gi|255088019|ref|XP_002505932.1| methyl binding domain protein [Micromonas sp. RCC299]
gi|226521203|gb|ACO67190.1| methyl binding domain protein [Micromonas sp. RCC299]
Length = 232
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 25/38 (65%), Gaps = 3/38 (7%)
Query: 30 PPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
P GW RE + R SV D +YYSPCGK++R++ +V
Sbjct: 80 PEGWRREVIPRK---SVQGADAYYYSPCGKRMRSKPDV 114
>gi|426258200|ref|XP_004022706.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding protein 2 [Ovis
aries]
Length = 497
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 112 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 156
>gi|390480372|ref|XP_003735907.1| PREDICTED: methyl-CpG-binding protein 2 [Callithrix jacchus]
Length = 497
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 106 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 150
>gi|387541748|gb|AFJ71501.1| methyl-CpG-binding protein 2 isoform 2 [Macaca mulatta]
Length = 498
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 107 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 151
>gi|297711430|ref|XP_002832346.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding protein 2 [Pongo
abelii]
Length = 489
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 98 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 142
>gi|160707950|ref|NP_001104262.1| methyl-CpG-binding protein 2 isoform 2 [Homo sapiens]
gi|332861983|ref|XP_521333.3| PREDICTED: methyl-CpG-binding protein 2 [Pan troglodytes]
gi|426397930|ref|XP_004065157.1| PREDICTED: methyl-CpG-binding protein 2 [Gorilla gorilla gorilla]
gi|45181603|gb|AAS55455.1| methyl CpG binding protein 2 isoform B [Homo sapiens]
gi|119593165|gb|EAW72759.1| methyl CpG binding protein 2 (Rett syndrome), isoform CRA_c [Homo
sapiens]
gi|410223130|gb|JAA08784.1| methyl CpG binding protein 2 (Rett syndrome) [Pan troglodytes]
gi|410253212|gb|JAA14573.1| methyl CpG binding protein 2 (Rett syndrome) [Pan troglodytes]
gi|410342697|gb|JAA40295.1| methyl CpG binding protein 2 (Rett syndrome) [Pan troglodytes]
Length = 498
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 107 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 151
>gi|2146960|pir||S57963 methyl CpG binding protein 2 - human (fragment)
gi|899296|emb|CAA61599.1| methyl CpG binding protein 2 [Homo sapiens]
Length = 476
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 85 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 129
>gi|449670049|ref|XP_002168970.2| PREDICTED: uncharacterized protein LOC100214210 [Hydra
magnipapillata]
Length = 1465
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 8/61 (13%)
Query: 29 LPPGWYREE----VTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQ-VIRGNIPGVSFDFR 83
L GW R+ V +GL + DV+YYSPCGKKLRT E+ +I+ I + D+
Sbjct: 960 LQKGWRRQTRLRPVNNGEGL---RGDVYYYSPCGKKLRTYPEINSYMIKNEITDLQLDYF 1016
Query: 84 S 84
S
Sbjct: 1017 S 1017
>gi|441676071|ref|XP_003279406.2| PREDICTED: methyl-CpG-binding protein 2 [Nomascus leucogenys]
Length = 258
Score = 41.6 bits (96), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 107 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 151
>gi|427795741|gb|JAA63322.1| Putative bromodomain adjacent to zinc finger domain protein 2b,
partial [Rhipicephalus pulchellus]
Length = 1293
Score = 41.6 bits (96), Expect = 0.053, Method: Composition-based stats.
Identities = 22/55 (40%), Positives = 32/55 (58%)
Query: 20 TKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
T +R L GW R+ + + G S K +V Y +PCGKKLR+ EVL+ ++ N
Sbjct: 301 TNEREARIPLERGWQRQTIIHSYGKSGVKGEVIYIAPCGKKLRSYPEVLKYLQQN 355
>gi|224106479|ref|XP_002314180.1| methyl binding domain protein [Populus trichocarpa]
gi|222850588|gb|EEE88135.1| methyl binding domain protein [Populus trichocarpa]
Length = 214
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPC-GKKLRTRSEV 67
E LPPGW E+ R G + G VD +Y P G+K R++ +V
Sbjct: 70 ETSWLPPGWVVEDRIRTSGATAGTVDKYYIDPASGRKFRSKKDV 113
>gi|380023668|ref|XP_003695637.1| PREDICTED: bromodomain adjacent to zinc finger domain protein
2B-like [Apis florea]
Length = 2272
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 16 KMLPTKKRYECPQLPPGWYREEVTRNKGLS-VGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
K+ P+++ + P L GW RE V + G S V K DV YYSPCGK R+ ++ + +
Sbjct: 599 KVKPSERDLQVP-LERGWKRETVIKGLGKSGVIKGDVSYYSPCGKTFRSSPDLAKFLEQQ 657
Query: 75 IP----GVSFDFRSGKL 87
P +F F S L
Sbjct: 658 NPPELTTANFSFSSRPL 674
>gi|388503158|gb|AFK39645.1| unknown [Lotus japonicus]
Length = 176
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN-----IPGVSFD 81
P+ P G+ R V R K+D +Y +P GKKLRTR+E+ ++ + I FD
Sbjct: 91 PKTPQGFRRSLVLRK---DYSKLDAYYITPTGKKLRTRNEIAAFLKEHPEFEGISAQDFD 147
Query: 82 FRSGKL 87
F S K+
Sbjct: 148 FSSPKV 153
>gi|390334110|ref|XP_003723851.1| PREDICTED: bromodomain adjacent to zinc finger domain protein
2B-like isoform 3 [Strongylocentrotus purpuratus]
Length = 2266
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 29 LPPGWYREEVTRNKGLSVG-KVDVFYYSPCGKKLRTRSEVLQVI 71
L GW R+ + R G K DV YY+PCGKKLRT EV++ I
Sbjct: 592 LANGWRRQTIIRQLGPGDRIKGDVIYYAPCGKKLRTYPEVVRYI 635
>gi|390334106|ref|XP_783177.3| PREDICTED: bromodomain adjacent to zinc finger domain protein
2B-like isoform 4 [Strongylocentrotus purpuratus]
Length = 2272
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 29 LPPGWYREEVTRNKGLSVG-KVDVFYYSPCGKKLRTRSEVLQVI 71
L GW R+ + R G K DV YY+PCGKKLRT EV++ I
Sbjct: 592 LANGWRRQTIIRQLGPGDRIKGDVIYYAPCGKKLRTYPEVVRYI 635
>gi|390334104|ref|XP_003723849.1| PREDICTED: bromodomain adjacent to zinc finger domain protein
2B-like isoform 1 [Strongylocentrotus purpuratus]
Length = 2186
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 29 LPPGWYREEVTRNKGLSVG-KVDVFYYSPCGKKLRTRSEVLQVI 71
L GW R+ + R G K DV YY+PCGKKLRT EV++ I
Sbjct: 592 LANGWRRQTIIRQLGPGDRIKGDVIYYAPCGKKLRTYPEVVRYI 635
>gi|350407087|ref|XP_003487980.1| PREDICTED: hypothetical protein LOC100749908 [Bombus impatiens]
Length = 2303
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 16 KMLPTKKRYECPQLPPGWYREEVTRNKGLS-VGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
K+ P+++ + P L GW RE V + G S V K DV YYSPCGK R+ ++ + +
Sbjct: 607 KVKPSERDLQVP-LERGWKRETVIKGLGKSGVIKGDVSYYSPCGKTFRSSPDLAKFLEQQ 665
Query: 75 IP----GVSFDFRSGKL 87
P +F F S L
Sbjct: 666 NPPDLTTANFSFSSRPL 682
>gi|307203572|gb|EFN82605.1| PHD finger protein 20 [Harpegnathos saltator]
Length = 1346
Score = 41.6 bits (96), Expect = 0.060, Method: Composition-based stats.
Identities = 27/75 (36%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDV-FYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGK 86
+LPPGW + R G S GK DV F + GKK R+R+++ +V N + FD
Sbjct: 524 RLPPGWEKHFTQRKAGTSAGKWDVLFIHKQTGKKFRSRNDI-RVFMENQGQLDFDPEKFD 582
Query: 87 LNSLQKHRNKQRGNQ 101
+K RN R Q
Sbjct: 583 FCIHRKKRNVHRIKQ 597
>gi|328792710|ref|XP_623473.3| PREDICTED: bromodomain adjacent to zinc finger domain protein
2B-like [Apis mellifera]
Length = 2293
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 16 KMLPTKKRYECPQLPPGWYREEVTRNKGLS-VGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
K+ P+++ + P L GW RE V + G S V K DV YYSPCGK R+ ++ + +
Sbjct: 570 KVKPSERDLQVP-LERGWKRETVIKGLGKSGVIKGDVSYYSPCGKTFRSSPDLAKFLEQQ 628
Query: 75 IP----GVSFDFRSGKL 87
P +F F S L
Sbjct: 629 NPPELTTANFSFSSRPL 645
>gi|340709835|ref|XP_003393506.1| PREDICTED: bromodomain adjacent to zinc finger domain protein
2B-like [Bombus terrestris]
Length = 2263
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 16 KMLPTKKRYECPQLPPGWYREEVTRNKGLS-VGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
K+ P+++ + P L GW RE V + G S V K DV YYSPCGK R+ ++ + +
Sbjct: 559 KVKPSERDLQVP-LERGWKRETVIKGLGKSGVIKGDVSYYSPCGKTFRSSPDLAKFLEQQ 617
Query: 75 IP----GVSFDFRSGKL 87
P +F F S L
Sbjct: 618 NPPDLTTANFSFSSRPL 634
>gi|242350737|gb|ACS92725.1| truncated methyl CpG binding protein 2 transcript 1 [Homo sapiens]
Length = 329
Score = 41.6 bits (96), Expect = 0.066, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|390334108|ref|XP_003723850.1| PREDICTED: bromodomain adjacent to zinc finger domain protein
2B-like isoform 2 [Strongylocentrotus purpuratus]
Length = 2303
Score = 41.6 bits (96), Expect = 0.068, Method: Composition-based stats.
Identities = 22/44 (50%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 29 LPPGWYREEVTRNKGLSVG-KVDVFYYSPCGKKLRTRSEVLQVI 71
L GW R+ + R G K DV YY+PCGKKLRT EV++ I
Sbjct: 592 LANGWRRQTIIRQLGPGDRIKGDVIYYAPCGKKLRTYPEVVRYI 635
>gi|255584216|ref|XP_002532846.1| DNA binding protein, putative [Ricinus communis]
gi|223527383|gb|EEF29524.1| DNA binding protein, putative [Ricinus communis]
Length = 234
Score = 41.6 bits (96), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 27/54 (50%), Gaps = 1/54 (1%)
Query: 15 LKMLPTKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSP-CGKKLRTRSEV 67
+ M P LPPGW E+ R G + G VD +Y P G++ R++ EV
Sbjct: 86 VTMAPAPSADSANWLPPGWLVEDRVRASGATAGTVDKYYIEPVTGRRFRSKKEV 139
>gi|410899959|ref|XP_003963464.1| PREDICTED: methyl-CpG-binding domain protein 4-like [Takifugu
rubripes]
Length = 257
Score = 41.2 bits (95), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
+PPGW RE R G + GK+DV+ SP G K R+++ + + N
Sbjct: 24 MPPGWIREVRQRKTGKTAGKLDVYIISPQGLKFRSKTSLQAFLLKN 69
>gi|225434937|ref|XP_002283682.1| PREDICTED: uncharacterized protein LOC100243225 [Vitis vinifera]
Length = 207
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNI 75
LPP W+ E+ TR +G G +D F+ P G + R++ +VL ++ +
Sbjct: 101 LPPDWHVEKETRLQGKKAGYLDSFFVDPMGNRFRSKKKVLSFLQTEV 147
>gi|297746070|emb|CBI16126.3| unnamed protein product [Vitis vinifera]
Length = 177
Score = 41.2 bits (95), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNI 75
LPP W+ E+ TR +G G +D F+ P G + R++ +VL ++ +
Sbjct: 71 LPPDWHVEKETRLQGKKAGYLDSFFVDPMGNRFRSKKKVLSFLQTEV 117
>gi|242094104|ref|XP_002437542.1| hypothetical protein SORBIDRAFT_10g029100 [Sorghum bicolor]
gi|241915765|gb|EER88909.1| hypothetical protein SORBIDRAFT_10g029100 [Sorghum bicolor]
Length = 348
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
Q PPGW RE R +G S DV+Y SP GKKLR+ E+ + + N
Sbjct: 167 QPPPGWDRE--VRLRGASTKFADVYYTSPSGKKLRSLVEIGRYLEQN 211
>gi|218198840|gb|EEC81267.1| hypothetical protein OsI_24363 [Oryza sativa Indica Group]
Length = 334
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 22/40 (55%), Positives = 25/40 (62%), Gaps = 1/40 (2%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
Q PPGW RE R +G S DV+Y SP GKKLR+ EV
Sbjct: 166 QTPPGWDREVRIRGEGCS-KFADVYYTSPTGKKLRSLVEV 204
>gi|320006183|gb|ADW01219.1| mutant methyl CpG binding protein 2 [Homo sapiens]
Length = 486
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ +P GK R++ E +
Sbjct: 95 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVESI 139
>gi|125598409|gb|EAZ38189.1| hypothetical protein OsJ_22540 [Oryza sativa Japonica Group]
Length = 359
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
Q PPGW RE R +G S DV+Y SP GKKLR+ EV + + N
Sbjct: 177 QTPPGWDREVRIRGEGCS-KFADVYYTSPTGKKLRSLVEVGRYLAEN 222
>gi|297606456|ref|NP_001058488.2| Os06g0702100 [Oryza sativa Japonica Group]
gi|255677371|dbj|BAF20402.2| Os06g0702100 [Oryza sativa Japonica Group]
Length = 373
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
Q PPGW RE R +G S DV+Y SP GKKLR+ EV + + N
Sbjct: 191 QTPPGWDREVRIRGEGCS-KFADVYYTSPTGKKLRSLVEVGRYLAEN 236
>gi|417406286|gb|JAA49807.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 1284
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YYSPCGKKLR EV++ + R I +S D
Sbjct: 690 GWQRETRIRNFG---GRLQGEVAYYSPCGKKLRQYPEVIKYLSRNGIMDISRD 739
>gi|417406362|gb|JAA49842.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 1347
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YYSPCGKKLR EV++ + R I +S D
Sbjct: 753 GWQRETRIRNFG---GRLQGEVAYYSPCGKKLRQYPEVIKYLSRNGIMDISRD 802
>gi|147853279|emb|CAN80675.1| hypothetical protein VITISV_003810 [Vitis vinifera]
Length = 319
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 16/47 (34%), Positives = 28/47 (59%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNI 75
LPP W+ E+ TR +G G +D F+ P G + R++ +VL ++ +
Sbjct: 213 LPPDWHVEKETRLQGKKAGYLDSFFVDPMGNRFRSKKKVLSFLQTEV 259
>gi|417406231|gb|JAA49780.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 1249
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 32 GWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G + + +V YYSPCGKKLR EV++ + R I +S D
Sbjct: 655 GWQRETRIRNFGGRL-QGEVAYYSPCGKKLRQYPEVIKYLSRNGIMDISRD 704
>gi|417406766|gb|JAA50027.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 1831
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YYSPCGKKLR EV++ + R I +S D
Sbjct: 753 GWQRETRIRNFG---GRLQGEVAYYSPCGKKLRQYPEVIKYLSRNGIMDISRD 802
>gi|417406075|gb|JAA49714.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 1186
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YYSPCGKKLR EV++ + R I +S D
Sbjct: 592 GWQRETRIRNFG---GRLQGEVAYYSPCGKKLRQYPEVIKYLSRNGIMDISRD 641
>gi|417406727|gb|JAA50008.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 1768
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YYSPCGKKLR EV++ + R I +S D
Sbjct: 690 GWQRETRIRNFG---GRLQGEVAYYSPCGKKLRQYPEVIKYLSRNGIMDISRD 739
>gi|417406914|gb|JAA50097.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2143
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YYSPCGKKLR EV++ + R I +S D
Sbjct: 690 GWQRETRIRNFG---GRLQGEVAYYSPCGKKLRQYPEVIKYLSRNGIMDISRD 739
>gi|417406900|gb|JAA50090.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2108
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 32 GWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G + + +V YYSPCGKKLR EV++ + R I +S D
Sbjct: 655 GWQRETRIRNFGGRL-QGEVAYYSPCGKKLRQYPEVIKYLSRNGIMDISRD 704
>gi|417406931|gb|JAA50104.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2206
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 32 GWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G + + +V YYSPCGKKLR EV++ + R I +S D
Sbjct: 753 GWQRETRIRNFGGRL-QGEVAYYSPCGKKLRQYPEVIKYLSRNGIMDISRD 802
>gi|392895585|ref|NP_498673.3| Protein FLT-1 [Caenorhabditis elegans]
gi|379656931|emb|CCD65251.2| Protein FLT-1 [Caenorhabditis elegans]
Length = 1390
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 27/43 (62%)
Query: 32 GWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
GW R+ R+ + K DV Y++PCGKKL T SEV++ + N
Sbjct: 336 GWRRQTCVRSIASAGVKGDVSYFAPCGKKLSTYSEVVRYLTKN 378
>gi|395513241|ref|XP_003760836.1| PREDICTED: methyl-CpG-binding domain protein 3 [Sarcophilus
harrisii]
Length = 272
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 34/50 (68%)
Query: 49 VDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
+ +F +SP GKK R++ ++ + + ++ +FDFR+GK+ + ++N+QR
Sbjct: 14 ISLFLFSPSGKKFRSKPQLARYLGSSMDLSTFDFRTGKMLMSKMNKNRQR 63
>gi|417406880|gb|JAA50080.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2045
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 32 GWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G + + +V YYSPCGKKLR EV++ + R I +S D
Sbjct: 592 GWQRETRIRNFGGRL-QGEVAYYSPCGKKLRQYPEVIKYLSRNGIMDISRD 641
>gi|345784370|ref|XP_541093.3| PREDICTED: methyl-CpG-binding domain protein 2 [Canis lupus
familiaris]
Length = 289
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 30/48 (62%)
Query: 51 VFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
+ Y SP GKK R++ ++ + + + SFDFR+GK+ + +NKQR
Sbjct: 55 LHYTSPSGKKFRSKPQLARYLGNTVDLSSFDFRTGKMMPSKLQKNKQR 102
>gi|302843023|ref|XP_002953054.1| hypothetical protein VOLCADRAFT_105771 [Volvox carteri f.
nagariensis]
gi|300261765|gb|EFJ45976.1| hypothetical protein VOLCADRAFT_105771 [Volvox carteri f.
nagariensis]
Length = 2579
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVI 71
LP GW R G S G+ D++Y SP G+ +R+R+EVL+++
Sbjct: 134 LPQGWMGVYKMRVGGNSAGQYDLYYKSPEGRMIRSRAEVLRIL 176
>gi|15214874|gb|AAH12576.1| BAZ2B protein [Homo sapiens]
Length = 643
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 458 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 507
>gi|332236824|ref|XP_003267600.1| PREDICTED: methyl-CpG-binding domain protein 2 [Nomascus
leucogenys]
Length = 245
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%)
Query: 53 YYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
Y SP GKK R++ ++ + + + SFDFR+GK+ + +NKQR
Sbjct: 13 YISPSGKKFRSKPQLARYLGNTVDLSSFDFRTGKMMPSKLQKNKQR 58
>gi|307169034|gb|EFN61879.1| Bromodomain adjacent to zinc finger domain protein 2B [Camponotus
floridanus]
Length = 2352
Score = 40.4 bits (93), Expect = 0.15, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 16 KMLPTKKRYECPQLPPGWYREEVTRNKGLS-VGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
K+ P+++ + P L GW RE V + G S V K +V YYSPCGK R +++ + +
Sbjct: 608 KLRPSERDLQMP-LERGWRRETVIKGLGKSGVIKGEVSYYSPCGKTFRNSADLAKFLEHQ 666
Query: 75 IPG----VSFDFRSGKL 87
P +F F S L
Sbjct: 667 NPAELTTANFSFSSRPL 683
>gi|340730117|ref|XP_003403333.1| PREDICTED: hypothetical protein LOC100651907 isoform 3 [Bombus
terrestris]
Length = 1378
Score = 40.0 bits (92), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDV-FYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGK 86
+LPPGW + R G S GK DV F + GKK R+++++ + FDF K
Sbjct: 544 RLPPGWQKHFTQRKAGTSAGKWDVLFLHKSSGKKFRSKNDIRAFMENQ---GQFDFDPEK 600
Query: 87 LNSLQKHRNKQRGNQ 101
+ HR K+ +Q
Sbjct: 601 FD-FCIHRKKKNQSQ 614
>gi|195456816|ref|XP_002075300.1| GK17291 [Drosophila willistoni]
gi|194171385|gb|EDW86286.1| GK17291 [Drosophila willistoni]
Length = 1266
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 1/68 (1%)
Query: 16 KMLPTKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNI 75
K+ PT + Y P GW RE V + DVF+ SP G+K R+R +++ ++G++
Sbjct: 516 KLKPTDEHYRLP-FAHGWKRELVLPSTDTHRRSGDVFFISPEGRKFRSREDIIPQLKGDL 574
Query: 76 PGVSFDFR 83
F F+
Sbjct: 575 TIDHFCFQ 582
>gi|449523954|ref|XP_004168988.1| PREDICTED: methyl-CpG-binding domain-containing protein 6-like
[Cucumis sativus]
Length = 206
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 26/41 (63%), Gaps = 1/41 (2%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCG-KKLRTRSEVL 68
LPPGW E+ R+ G + G VD +Y+ P ++ R++ EVL
Sbjct: 144 LPPGWVVEDRVRSSGATAGTVDKYYFDPVSNRRFRSKIEVL 184
>gi|350425399|ref|XP_003494110.1| PREDICTED: hypothetical protein LOC100749657 isoform 1 [Bombus
impatiens]
Length = 1372
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDV-FYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGK 86
+LPPGW + R G S GK DV F + GKK R+++++ + FDF K
Sbjct: 546 RLPPGWQKHFTQRKAGTSAGKWDVLFLHKSSGKKFRSKNDIRAFMENQ---GQFDFDPEK 602
Query: 87 LNSLQKHRNKQRGNQ 101
+ HR K+ +Q
Sbjct: 603 FD-FCIHRKKKNQSQ 616
>gi|224117174|ref|XP_002331766.1| methyl binding domain protein [Populus trichocarpa]
gi|224117178|ref|XP_002331767.1| hypothetical protein POPTRDRAFT_585558 [Populus trichocarpa]
gi|222874359|gb|EEF11490.1| methyl binding domain protein [Populus trichocarpa]
gi|222874360|gb|EEF11491.1| hypothetical protein POPTRDRAFT_585558 [Populus trichocarpa]
Length = 182
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN-----IPGVSFD 81
P+ P G+ R V R K+D +Y +P GKKLRTR+E+ I N + +F+
Sbjct: 91 PKTPEGFKRSLVLRR---DFSKMDAYYITPTGKKLRTRNEIAAFIEANPKYKDVNLSAFN 147
Query: 82 FRSGKL 87
F S K+
Sbjct: 148 FTSPKV 153
>gi|52545889|emb|CAD39044.2| hypothetical protein [Homo sapiens]
Length = 967
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 32 GWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G + + +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 752 GWQRETRIRNFGGRL-QGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 801
>gi|350425402|ref|XP_003494111.1| PREDICTED: hypothetical protein LOC100749657 isoform 2 [Bombus
impatiens]
Length = 1363
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDV-FYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGK 86
+LPPGW + R G S GK DV F + GKK R+++++ + FDF K
Sbjct: 537 RLPPGWQKHFTQRKAGTSAGKWDVLFLHKSSGKKFRSKNDIRAFMENQ---GQFDFDPEK 593
Query: 87 LNSLQKHRNKQRGNQ 101
+ HR K+ +Q
Sbjct: 594 FD-FCIHRKKKNQSQ 607
>gi|328786530|ref|XP_001121736.2| PREDICTED: hypothetical protein LOC725950 [Apis mellifera]
Length = 1377
Score = 40.0 bits (92), Expect = 0.16, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDV-FYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGK 86
+LPPGW + R G S GK DV F + GKK R+++++ + FDF K
Sbjct: 545 RLPPGWQKHFTQRKAGTSAGKWDVLFLHKSSGKKFRSKNDIRAFMENQ---GQFDFDPEK 601
Query: 87 LNSLQKHRNKQRGNQ 101
+ HR K+ +Q
Sbjct: 602 FD-FCIHRKKKNQSQ 615
>gi|340730113|ref|XP_003403331.1| PREDICTED: hypothetical protein LOC100651907 isoform 1 [Bombus
terrestris]
Length = 1359
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDV-FYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGK 86
+LPPGW + R G S GK DV F + GKK R+++++ + FDF K
Sbjct: 535 RLPPGWQKHFTQRKAGTSAGKWDVLFLHKSSGKKFRSKNDIRAFMENQ---GQFDFDPEK 591
Query: 87 LNSLQKHRNKQRGNQ 101
+ HR K+ +Q
Sbjct: 592 FD-FCIHRKKKNQSQ 605
>gi|388511439|gb|AFK43781.1| unknown [Lotus japonicus]
Length = 180
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%), Gaps = 8/66 (12%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN-----IPGVSFD 81
P+ P G+ R V R K+D +Y +P GKKLRTR+E ++ + I FD
Sbjct: 92 PKTPEGFKRSLVLRK---DYSKLDAYYITPTGKKLRTRNEAAAFLKDHPELQGISAQDFD 148
Query: 82 FRSGKL 87
F K+
Sbjct: 149 FSCPKI 154
>gi|340730115|ref|XP_003403332.1| PREDICTED: hypothetical protein LOC100651907 isoform 2 [Bombus
terrestris]
Length = 1368
Score = 40.0 bits (92), Expect = 0.17, Method: Composition-based stats.
Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 5/75 (6%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDV-FYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGK 86
+LPPGW + R G S GK DV F + GKK R+++++ + FDF K
Sbjct: 544 RLPPGWQKHFTQRKAGTSAGKWDVLFLHKSSGKKFRSKNDIRAFMENQ---GQFDFDPEK 600
Query: 87 LNSLQKHRNKQRGNQ 101
+ HR K+ +Q
Sbjct: 601 FD-FCIHRKKKNQSQ 614
>gi|195048973|ref|XP_001992626.1| GH24855 [Drosophila grimshawi]
gi|193893467|gb|EDV92333.1| GH24855 [Drosophila grimshawi]
Length = 967
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 5/67 (7%)
Query: 16 KMLPTKKRYECPQLPPGWYREEVT-RNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
K+L T Y P GW RE V N + + DV + SP GKKLR+R +++ ++
Sbjct: 151 KLLATDPFYRLP-FEHGWKRELVLPSNLNNARQQADVIFISPGGKKLRSRDDIVPLL--- 206
Query: 75 IPGVSFD 81
+PG+S D
Sbjct: 207 VPGLSID 213
>gi|194903030|ref|XP_001980805.1| GG16885 [Drosophila erecta]
gi|190652508|gb|EDV49763.1| GG16885 [Drosophila erecta]
Length = 334
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 28/82 (34%), Positives = 38/82 (46%), Gaps = 24/82 (29%)
Query: 21 KKRYECPQLPPGWYREEV---------------TRNKGLSVGKVDVFYYSPCGKKLRTRS 65
+KR +C LP GW R+EV T + KVDVFYYSP GK+ +
Sbjct: 11 RKRVDCSVLPKGWQRDEVRKSGSSTNSNNSSSATAGSNNNNNKVDVFYYSPTGKRAEGKP 70
Query: 66 EVLQVIRGNIPGVSFDFRSGKL 87
+ + IP DF+ GK+
Sbjct: 71 QDIA-----IP----DFQPGKM 83
>gi|6683500|dbj|BAA89212.1| bromodomain adjacent to zinc finger domain 2B [Homo sapiens]
Length = 1972
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 556 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 605
>gi|402888433|ref|XP_003907566.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B [Papio anubis]
Length = 2131
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 753 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 802
>gi|350593515|ref|XP_003133470.3| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Sus scrofa]
Length = 1986
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 751 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 800
>gi|410035848|ref|XP_525949.4| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Pan troglodytes]
Length = 2198
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 749 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 798
>gi|432098345|gb|ELK28145.1| Bromodomain adjacent to zinc finger domain protein 2B [Myotis
davidii]
Length = 2206
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 753 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 802
>gi|390464478|ref|XP_002806959.2| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B [Callithrix jacchus]
Length = 2178
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 753 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 802
>gi|351711943|gb|EHB14862.1| Bromodomain adjacent to zinc finger domain protein 2B
[Heterocephalus glaber]
Length = 2168
Score = 39.7 bits (91), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 751 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 800
>gi|383851119|ref|XP_003701087.1| PREDICTED: uncharacterized protein LOC100875782 [Megachile
rotundata]
Length = 1380
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDV-FYYSPCGKKLRTRSEV 67
+LPPGW + R G S GK DV F + GKK R+R+++
Sbjct: 550 RLPPGWQKHFTQRKAGTSAGKWDVLFLHKSSGKKFRSRNDI 590
>gi|332234004|ref|XP_003266198.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Nomascus leucogenys]
Length = 2167
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 751 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 800
>gi|301779808|ref|XP_002925321.1| PREDICTED: bromodomain adjacent to zinc finger domain protein
2B-like [Ailuropoda melanoleuca]
Length = 2169
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 751 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 800
>gi|291391605|ref|XP_002712247.1| PREDICTED: bromodomain adjacent to zinc finger domain, 2B
[Oryctolagus cuniculus]
Length = 2168
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 751 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 800
>gi|194222248|ref|XP_001916271.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Equus caballus]
Length = 2170
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 752 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 801
>gi|195499469|ref|XP_002096961.1| methyl-CpG-binding-domain-like [Drosophila yakuba]
gi|194183062|gb|EDW96673.1| methyl-CpG-binding-domain-like [Drosophila yakuba]
Length = 339
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 29/87 (33%)
Query: 21 KKRYECPQLPPGWYREEVTRN--------------------KGLSVGKVDVFYYSPCGKK 60
+KR +C LP GW R+EV ++ + KVDVFYYSP GK+
Sbjct: 11 RKRVDCSVLPKGWQRDEVRKSGSSANSNASSNNNSSSATASSNNNNNKVDVFYYSPTGKR 70
Query: 61 LRTRSEVLQVIRGNIPGVSFDFRSGKL 87
+ + + IP DF+SGK+
Sbjct: 71 AEGKPQDIA-----IP----DFQSGKM 88
>gi|329664076|ref|NP_001192347.1| bromodomain adjacent to zinc finger domain protein 2B [Bos taurus]
gi|296490606|tpg|DAA32719.1| TPA: bromodomain adjacent to zinc finger domain, 2B [Bos taurus]
Length = 2167
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 751 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 800
>gi|440898818|gb|ELR50241.1| Bromodomain adjacent to zinc finger domain protein 2B [Bos
grunniens mutus]
Length = 2166
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 750 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 799
>gi|395846680|ref|XP_003796028.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Otolemur garnettii]
Length = 2146
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 753 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 802
>gi|395732421|ref|XP_002812584.2| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B [Pongo abelii]
Length = 2004
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 654 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 703
>gi|344268059|ref|XP_003405881.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Loxodonta africana]
Length = 2169
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 750 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 799
>gi|195330376|ref|XP_002031880.1| GM23815 [Drosophila sechellia]
gi|194120823|gb|EDW42866.1| GM23815 [Drosophila sechellia]
Length = 338
Score = 39.7 bits (91), Expect = 0.21, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 29/87 (33%)
Query: 21 KKRYECPQLPPGWYREEVTRN--------------------KGLSVGKVDVFYYSPCGKK 60
+KR +C LP GW R+EV ++ + KVDVFYYSP GK+
Sbjct: 11 RKRVDCSVLPKGWQRDEVRKSGSSANSNASSNNNSSSATASSNNNNNKVDVFYYSPTGKR 70
Query: 61 LRTRSEVLQVIRGNIPGVSFDFRSGKL 87
+ + + IP DF+SGK+
Sbjct: 71 AEGKPQDIA-----IP----DFQSGKM 88
>gi|126326221|ref|XP_001366439.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Monodelphis domestica]
Length = 2180
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 762 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 811
>gi|426221047|ref|XP_004004723.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Ovis aries]
Length = 2167
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 751 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 800
>gi|119631811|gb|EAX11406.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_c [Homo
sapiens]
Length = 2231
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 752 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 801
>gi|431894841|gb|ELK04634.1| Bromodomain adjacent to zinc finger domain protein 2B [Pteropus
alecto]
Length = 2135
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 683 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 732
>gi|410968711|ref|XP_003990845.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B [Felis catus]
Length = 2171
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 753 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 802
>gi|410348356|gb|JAA40782.1| bromodomain adjacent to zinc finger domain, 2B [Pan troglodytes]
Length = 2176
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 751 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 800
>gi|397500603|ref|XP_003820998.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Pan paniscus]
Length = 2168
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 752 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 801
>gi|281337460|gb|EFB13044.1| hypothetical protein PANDA_014792 [Ailuropoda melanoleuca]
Length = 2122
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 704 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 753
>gi|255567630|ref|XP_002524794.1| DNA binding protein, putative [Ricinus communis]
gi|223535978|gb|EEF37637.1| DNA binding protein, putative [Ricinus communis]
Length = 160
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN--IPGVS---FD 81
P+ P G+ R V R K+D +Y +P GKKLRTR+E+ + N GVS F+
Sbjct: 70 PKTPGGFKRSLVLRR---DFSKMDAYYITPTGKKLRTRNEIAAFLEANPKYKGVSIEDFN 126
Query: 82 FRSGKL 87
F S K+
Sbjct: 127 FTSPKV 132
>gi|297264141|ref|XP_002808049.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2B-like [Macaca mulatta]
Length = 2188
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 753 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 802
>gi|94681063|ref|NP_038478.2| bromodomain adjacent to zinc finger domain protein 2B [Homo
sapiens]
gi|229462995|sp|Q9UIF8.3|BAZ2B_HUMAN RecName: Full=Bromodomain adjacent to zinc finger domain protein
2B; AltName: Full=hWALp4
gi|119631809|gb|EAX11404.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_b [Homo
sapiens]
gi|119631810|gb|EAX11405.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_b [Homo
sapiens]
gi|119631812|gb|EAX11407.1| bromodomain adjacent to zinc finger domain, 2B, isoform CRA_b [Homo
sapiens]
gi|162319380|gb|AAI56488.1| Bromodomain adjacent to zinc finger domain, 2B [synthetic
construct]
Length = 2168
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 752 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 801
>gi|403258938|ref|XP_003921998.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Saimiri boliviensis boliviensis]
Length = 2170
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 753 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 802
>gi|345797221|ref|XP_856450.2| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
isoform 2 [Canis lupus familiaris]
Length = 2169
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 752 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 801
>gi|345328056|ref|XP_001512551.2| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
isoform 1 [Ornithorhynchus anatinus]
Length = 2183
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 761 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 810
>gi|195572246|ref|XP_002104107.1| GD18624 [Drosophila simulans]
gi|194200034|gb|EDX13610.1| GD18624 [Drosophila simulans]
Length = 341
Score = 39.7 bits (91), Expect = 0.22, Method: Composition-based stats.
Identities = 28/87 (32%), Positives = 40/87 (45%), Gaps = 29/87 (33%)
Query: 21 KKRYECPQLPPGWYREEVTRN--------------------KGLSVGKVDVFYYSPCGKK 60
+KR +C LP GW R+EV ++ + KVDVFYYSP GK+
Sbjct: 11 RKRVDCSVLPKGWQRDEVRKSGSSANSNASSNNNSSSATASSNNNNNKVDVFYYSPTGKR 70
Query: 61 LRTRSEVLQVIRGNIPGVSFDFRSGKL 87
+ + + IP DF+SGK+
Sbjct: 71 AEGKPQDIA-----IP----DFQSGKM 88
>gi|348585935|ref|XP_003478726.1| PREDICTED: bromodomain adjacent to zinc finger domain protein
2B-like isoform 1 [Cavia porcellus]
Length = 2170
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 32/53 (60%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G G++ +V YY+PCGKKLR EV++ + R I +S D
Sbjct: 753 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKYLSRNGIMDISRD 802
>gi|327283518|ref|XP_003226488.1| PREDICTED: bromodomain adjacent to zinc finger domain protein
2B-like [Anolis carolinensis]
Length = 2184
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 32 GWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE RN G + + +V YY+PCGKKLR EV++ + R I VS D
Sbjct: 761 GWQRETRIRNFGGRL-QGEVAYYTPCGKKLRQYPEVVKYLSRNGIMDVSRD 810
>gi|224128656|ref|XP_002320386.1| methyl binding domain protein [Populus trichocarpa]
gi|118485542|gb|ABK94623.1| unknown [Populus trichocarpa]
gi|222861159|gb|EEE98701.1| methyl binding domain protein [Populus trichocarpa]
Length = 182
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
P+ P G+ R V R K+D +Y +P GKKLRTR+E+ I N
Sbjct: 91 PKTPEGFKRSLVLRR---DFSKMDAYYITPTGKKLRTRNEIAAFIDAN 135
>gi|357442669|ref|XP_003591612.1| hypothetical protein MTR_1g089750 [Medicago truncatula]
gi|355480660|gb|AES61863.1| hypothetical protein MTR_1g089750 [Medicago truncatula]
gi|388499614|gb|AFK37873.1| unknown [Medicago truncatula]
Length = 176
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 8/66 (12%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN-----IPGVSFD 81
P+ P G+ + V R K+D +Y +P GKKLRTR+E+ ++ + + FD
Sbjct: 87 PKTPQGFKKILVLRK---DYSKLDSYYITPTGKKLRTRNEIAAYLKDHPQPSGVSAADFD 143
Query: 82 FRSGKL 87
F S K+
Sbjct: 144 FSSPKI 149
>gi|242012982|ref|XP_002427202.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212511494|gb|EEB14464.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 376
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 29 LPPGWYREEVTRNKGLSVG-KVDVFYYSPCGKKLRTRSEV 67
L GW RE V R G G + DV+Y+ P GKKLR+ EV
Sbjct: 315 LEKGWRRELVYRRNGTKTGQRADVYYFHPNGKKLRSCREV 354
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 45/80 (56%), Gaps = 15/80 (18%)
Query: 32 GWYREEV----TRNKGLSVGKVDVFYYSPCGKKLRTRSEV-LQVIRGNIPGVSFDFRSGK 86
GW RE V T+N+ L+ D++Y+SP GKK+R+ +E+ L + G P F F+
Sbjct: 27 GWTREVVKRVVTKNRNLNC---DIYYFSPSGKKIRSLTEIKLNLTDGLTPEC-FSFKRQP 82
Query: 87 L------NSLQKHRNKQRGN 100
L +++ RNK++G+
Sbjct: 83 LGINENFETVRDARNKRKGH 102
>gi|426229507|ref|XP_004008832.1| PREDICTED: methyl-CpG-binding domain protein 3 [Ovis aries]
Length = 270
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 7/66 (10%)
Query: 33 WYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQK 92
W +EE G + SP GKK R++ ++ + + G++ +FDFR+GK+ +
Sbjct: 3 WTKEEAEEGAG-------AWVLSPSGKKFRSKPQLARYLGGSMDLSTFDFRTGKMLMSKV 55
Query: 93 HRNKQR 98
++ +QR
Sbjct: 56 NKGRQR 61
>gi|307103473|gb|EFN51733.1| hypothetical protein CHLNCDRAFT_139929 [Chlorella variabilis]
Length = 1890
Score = 39.3 bits (90), Expect = 0.28, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVI 71
LP GW + R G S G +D +YYSP GK+ ++ +V + +
Sbjct: 734 LPFGWSVKAAIRQNGASAGGIDAYYYSPGGKRFKSMVKVAEAL 776
>gi|170591925|ref|XP_001900720.1| Bromodomain containing protein [Brugia malayi]
gi|158591872|gb|EDP30475.1| Bromodomain containing protein [Brugia malayi]
Length = 1592
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 23/39 (58%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
L GW R+ R S + DV YY+PCGKKL + +EV
Sbjct: 353 LKSGWRRQTCIRTISASGVRGDVIYYAPCGKKLGSYAEV 391
>gi|417406324|gb|JAA49824.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 1313
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQ 69
GW RE RN G G++ +V YYSPCGKKLR EV++
Sbjct: 753 GWQRETRIRNFG---GRLQGEVAYYSPCGKKLRQYPEVIK 789
>gi|47211430|emb|CAF93409.1| unnamed protein product [Tetraodon nigroviridis]
Length = 681
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ + GK R++ E++
Sbjct: 29 YDDPSLPEGWTRKLKQRKSGRSAGKFDVYLINSEGKAFRSKVELI 73
>gi|417406237|gb|JAA49783.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 1250
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQ 69
GW RE RN G G++ +V YYSPCGKKLR EV++
Sbjct: 690 GWQRETRIRNFG---GRLQGEVAYYSPCGKKLRQYPEVIK 726
>gi|354499582|ref|XP_003511887.1| PREDICTED: methyl-CpG-binding domain protein 2-like [Cricetulus
griseus]
Length = 344
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 55 SPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
SP GKK R++ ++ + + + SFDFR+GK+ + +NKQR
Sbjct: 114 SPSGKKFRSKPQLARYLGNAVDLSSFDFRTGKMMPSKLQKNKQR 157
>gi|82393857|gb|ABB72227.1| methyl CpG binding protein 2 [Bos taurus]
Length = 51
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 24/41 (58%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTR 64
Y+ P LP GW R+ R G S GK DV+ +P GK R++
Sbjct: 4 YDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSK 44
>gi|417406741|gb|JAA50015.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 1797
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQ 69
GW RE RN G G++ +V YYSPCGKKLR EV++
Sbjct: 753 GWQRETRIRNFG---GRLQGEVAYYSPCGKKLRQYPEVIK 789
>gi|300518922|gb|ADK25710.1| mutant methyl CpG binding protein 2 transcript 1 [Homo sapiens]
Length = 486
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP W R+ R G S GK DV+ +P GK R++ E++
Sbjct: 95 YDDPTLPEDWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELI 139
>gi|297817640|ref|XP_002876703.1| methyl-CpG-binding domain 4 [Arabidopsis lyrata subsp. lyrata]
gi|297322541|gb|EFH52962.1| methyl-CpG-binding domain 4 [Arabidopsis lyrata subsp. lyrata]
Length = 182
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
P+ P G+ R V R K+D +Y++P GKKLR+R+E+ + N
Sbjct: 90 PKTPQGFRRSLVLRK---DYSKMDTYYFTPTGKKLRSRNEIAAFVEAN 134
>gi|170045735|ref|XP_001850453.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167868663|gb|EDS32046.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 992
Score = 39.3 bits (90), Expect = 0.34, Method: Composition-based stats.
Identities = 23/66 (34%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 19 PTKKRYECPQLPPGWYREEVTRNK--GLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIP 76
P + ++ P GW RE V R G S K +V+Y +P GKKLRTR++++ + +
Sbjct: 144 PNDEAFKVP-FTFGWKRELVYRAHMDGNSKDKGEVYYITPAGKKLRTRNDIVMALHDGLT 202
Query: 77 GVSFDF 82
+F F
Sbjct: 203 MDNFTF 208
>gi|15229373|ref|NP_191862.1| methyl-CPG-binding domain 4 protein [Arabidopsis thaliana]
gi|75181050|sp|Q9LYB9.1|MBD4_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 4;
Short=AtMBD4; Short=MBD04; AltName:
Full=Methyl-CpG-binding protein MBD4
gi|7573432|emb|CAB87748.1| putative protein [Arabidopsis thaliana]
gi|34365655|gb|AAQ65139.1| At3g63030 [Arabidopsis thaliana]
gi|51971397|dbj|BAD44363.1| unknown protein [Arabidopsis thaliana]
gi|332646905|gb|AEE80426.1| methyl-CPG-binding domain 4 protein [Arabidopsis thaliana]
Length = 186
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
P+ P G+ R V R K+D +Y++P GKKLR+R+E+ + N
Sbjct: 91 PKTPKGFKRSLVLRK---DYSKMDTYYFTPTGKKLRSRNEIAAFVEAN 135
>gi|195999462|ref|XP_002109599.1| hypothetical protein TRIADDRAFT_53787 [Trichoplax adhaerens]
gi|190587723|gb|EDV27765.1| hypothetical protein TRIADDRAFT_53787 [Trichoplax adhaerens]
Length = 1866
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 3/49 (6%)
Query: 28 QLP--PGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
QLP GW R+ R G ++ + DV+Y++PCGKKLR +V + +R N
Sbjct: 448 QLPLDQGWRRQTRLRRVGRNL-RGDVYYFAPCGKKLRIYPDVTKYLRKN 495
>gi|355701342|gb|AES01652.1| methyl-CpG binding domain protein 2 isoform 1 [Mustela putorius
furo]
Length = 233
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 54 YSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
+SP GKK R++ ++ + + + SFDFR+GK+ + +NKQR
Sbjct: 1 FSPSGKKFRSKPQLARYLGNTVDLSSFDFRTGKMMPSKLQKNKQR 45
>gi|355701955|gb|EHH29308.1| Methyl-CpG-binding protein MBD2, partial [Macaca mulatta]
gi|355755038|gb|EHH58905.1| Methyl-CpG-binding protein MBD2, partial [Macaca fascicularis]
Length = 232
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 54 YSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
+SP GKK R++ ++ + + + SFDFR+GK+ + +NKQR
Sbjct: 1 FSPSGKKFRSKPQLARYLGNTVDLSSFDFRTGKMMPSKLQKNKQR 45
>gi|417406918|gb|JAA50099.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2172
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQ 69
GW RE RN G G++ +V YYSPCGKKLR EV++
Sbjct: 753 GWQRETRIRNFG---GRLQGEVAYYSPCGKKLRQYPEVIK 789
>gi|417406892|gb|JAA50086.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2074
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 32 GWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQ 69
GW RE RN G + + +V YYSPCGKKLR EV++
Sbjct: 655 GWQRETRIRNFGGRL-QGEVAYYSPCGKKLRQYPEVIK 691
>gi|417414064|gb|JAA53334.1| Putative chromatin remodeling complex wstf-iswi large subunit,
partial [Desmodus rotundus]
Length = 2092
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQ 69
GW RE RN G G++ +V YYSPCGKKLR EV++
Sbjct: 673 GWQRETRIRNFG---GRLQGEVAYYSPCGKKLRQYPEVIK 709
>gi|357498447|ref|XP_003619512.1| hypothetical protein MTR_6g055750 [Medicago truncatula]
gi|355494527|gb|AES75730.1| hypothetical protein MTR_6g055750 [Medicago truncatula]
Length = 174
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%), Gaps = 8/66 (12%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIR-----GNIPGVSFD 81
P+ P G+ R V R+ K+D +Y +P GK+LR+R+E+ ++ + + FD
Sbjct: 85 PKTPKGFKRISVLRD---DYSKLDSYYITPTGKQLRSRNEIASYLKDLPQPSGVSTLDFD 141
Query: 82 FRSGKL 87
F S K+
Sbjct: 142 FSSPKV 147
>gi|417406856|gb|JAA50069.1| Putative chromatin remodeling complex wstf-iswi large subunit
[Desmodus rotundus]
Length = 2011
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQ 69
GW RE RN G G++ +V YYSPCGKKLR EV++
Sbjct: 592 GWQRETRIRNFG---GRLQGEVAYYSPCGKKLRQYPEVIK 628
>gi|432960276|ref|XP_004086443.1| PREDICTED: uncharacterized protein LOC101167186 [Oryzias latipes]
Length = 1142
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ + GK R++ E+L
Sbjct: 274 YDDPTLPQGWTRKLKQRKSGRSAGKFDVYLINSEGKAFRSKVELL 318
>gi|312599247|gb|ADQ91270.1| hypothetical protein BpV2_103 [Bathycoccus sp. RCC1105 virus
BpV2]
Length = 250
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 4/64 (6%)
Query: 8 LSLVSNLLKMLPTKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
+S +S+L K L +K + ++ WY + TR G S G D +Y+SP GK+ R+ EV
Sbjct: 1 MSALSSLKKYLKSKGQ----EINDEWYVKIETRKSGKSAGMTDNYYFSPEGKRFRSMIEV 56
Query: 68 LQVI 71
+ +
Sbjct: 57 YRFL 60
>gi|440910441|gb|ELR60238.1| Methyl-CpG-binding domain protein 3, partial [Bos grunniens
mutus]
Length = 284
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 7/68 (10%)
Query: 33 WYRE--EVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSL 90
W+ E E R +GL D + SP GKK R++ ++ + + G++ +FDFR+GK+
Sbjct: 13 WHPETPEGPRRRGL-----DSSHESPSGKKFRSKPQLARYLGGSMDLSTFDFRTGKMLMS 67
Query: 91 QKHRNKQR 98
+ ++ +QR
Sbjct: 68 KVNKGRQR 75
>gi|393910541|gb|EJD75925.1| bromodomain containing protein [Loa loa]
Length = 1578
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVI 71
L GW R+ R S + DV YY+PCGKKL + +EV + +
Sbjct: 344 LKSGWRRQTCIRTISASGVRGDVIYYAPCGKKLGSYAEVTRYL 386
>gi|402588130|gb|EJW82064.1| bromodomain containing protein, partial [Wuchereria bancrofti]
Length = 841
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 18/43 (41%), Positives = 25/43 (58%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVI 71
L GW R+ R S + DV YY+PCGKKL + +EV + +
Sbjct: 354 LKSGWRRQTCIRTISASGVRGDVIYYAPCGKKLGSYAEVTRYL 396
>gi|357123643|ref|XP_003563518.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like
[Brachypodium distachyon]
Length = 375
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
Q PPGW R+ R +G S DV+Y SP GKKLR+ E+ + + N
Sbjct: 162 QPPPGWDRDVRIRGEG-SSKFADVYYTSPSGKKLRSLVEIGRYLAEN 207
>gi|395510683|ref|XP_003759602.1| PREDICTED: methyl-CpG-binding domain protein 2 [Sarcophilus
harrisii]
Length = 283
Score = 38.5 bits (88), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%)
Query: 50 DVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
D + P GKK R++ ++ + + + SFDFR+GK+ + +NKQR
Sbjct: 48 DADHAGPSGKKFRSKPQLARYLGNTVDLSSFDFRTGKMMPSKLQKNKQR 96
>gi|348540401|ref|XP_003457676.1| PREDICTED: hypothetical protein LOC100704200 [Oreochromis
niloticus]
Length = 1032
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 26/45 (57%)
Query: 24 YECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
Y+ P LP GW R+ R G S GK DV+ + GK R++ E++
Sbjct: 170 YDDPSLPEGWTRKLKQRKSGRSAGKFDVYLINSEGKAFRSKVELI 214
>gi|291393500|ref|XP_002713197.1| PREDICTED: methyl-CpG binding domain protein 4 [Oryctolagus
cuniculus]
Length = 561
Score = 38.5 bits (88), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 39/89 (43%), Gaps = 14/89 (15%)
Query: 3 ANDSPLS-----LVSNLLKMLPTKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPC 57
A+D PLS LV L M + K C GW R R G + GK DV++ SP
Sbjct: 45 ASDCPLSGRPFTLVKWELAMTESPKSVPC-----GWERVVKQRLSGKTAGKFDVYFISPQ 99
Query: 58 GKKLRTRSEVLQVIRGN----IPGVSFDF 82
G K R+R + + N + FDF
Sbjct: 100 GLKFRSRRSLTNYLHKNGETSLHPEDFDF 128
>gi|24645409|ref|NP_731370.1| MBD-like, isoform A [Drosophila melanogaster]
gi|23170814|gb|AAF54400.2| MBD-like, isoform A [Drosophila melanogaster]
gi|25012252|gb|AAN71240.1| LD22928p [Drosophila melanogaster]
Length = 339
Score = 38.5 bits (88), Expect = 0.56, Method: Composition-based stats.
Identities = 27/86 (31%), Positives = 39/86 (45%), Gaps = 28/86 (32%)
Query: 21 KKRYECPQLPPGWYREEVTRN-------------------KGLSVGKVDVFYYSPCGKKL 61
+KR +C LP GW R+EV ++ + KVDVFYYSP GK+
Sbjct: 11 RKRVDCSVLPKGWQRDEVRKSGSSANNNASSNNNSSATASSNNNNNKVDVFYYSPTGKRA 70
Query: 62 RTRSEVLQVIRGNIPGVSFDFRSGKL 87
+ + + IP DF+ GK+
Sbjct: 71 EGKPQDIA-----IP----DFQPGKM 87
>gi|91081211|ref|XP_975618.1| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 1102
Score = 38.1 bits (87), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVIRGN 74
GW RE V R + K D++YYSP GKK+R+ E+ +V++G+
Sbjct: 233 GWKRELVYRATFDNPNKRNGDIYYYSPTGKKIRSMRELTEVLKGS 277
>gi|270005259|gb|EFA01707.1| hypothetical protein TcasGA2_TC007283 [Tribolium castaneum]
Length = 1079
Score = 38.1 bits (87), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%), Gaps = 2/45 (4%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVIRGN 74
GW RE V R + K D++YYSP GKK+R+ E+ +V++G+
Sbjct: 210 GWKRELVYRATFDNPNKRNGDIYYYSPTGKKIRSMRELTEVLKGS 254
>gi|355750561|gb|EHH54888.1| hypothetical protein EGM_03990 [Macaca fascicularis]
Length = 2371
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%), Gaps = 5/41 (12%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQV 70
GW RE RN G G++ +V YY+PCGKKLR EV+++
Sbjct: 966 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIKL 1003
>gi|91094865|ref|XP_972506.1| PREDICTED: similar to phd finger domain [Tribolium castaneum]
Length = 1019
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
P+LP GW + R G S GK D SP ++ R++SE+
Sbjct: 385 PRLPEGWTKHLAQRMHGASAGKWDTIIVSPENRRFRSKSEI 425
>gi|332017137|gb|EGI57936.1| PHD finger protein 20-like protein 1 [Acromyrmex echinatior]
Length = 1350
Score = 38.1 bits (87), Expect = 0.63, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDV-FYYSPCGKKLRTRSEV 67
+LPPGW + R G S GK DV F + GKK R+R+++
Sbjct: 516 RLPPGWEKHFTQRKAGSSAGKWDVLFIHKQTGKKFRSRNDI 556
>gi|151555641|gb|AAI48867.1| BAZ2B protein [Bos taurus]
Length = 1285
Score = 38.1 bits (87), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 25/38 (65%), Gaps = 1/38 (2%)
Query: 32 GWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQ 69
GW RE RN G + + +V YY+PCGKKLR EV++
Sbjct: 653 GWQRETRIRNFGGRL-QGEVAYYAPCGKKLRQYPEVIK 689
>gi|307104195|gb|EFN52450.1| hypothetical protein CHLNCDRAFT_54503 [Chlorella variabilis]
Length = 1547
Score = 38.1 bits (87), Expect = 0.66, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 22/39 (56%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
L GW E R G S+G D +Y+SP K+ R+R E+
Sbjct: 47 LEEGWRVEVKIRGSGTSLGTTDAYYFSPGNKRYRSRMEI 85
>gi|270006581|gb|EFA03029.1| hypothetical protein TcasGA2_TC010453 [Tribolium castaneum]
Length = 1004
Score = 38.1 bits (87), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
P+LP GW + R G S GK D SP ++ R++SE+
Sbjct: 370 PRLPEGWTKHLAQRMHGASAGKWDTIIVSPENRRFRSKSEI 410
>gi|312283175|dbj|BAJ34453.1| unnamed protein product [Thellungiella halophila]
Length = 106
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
P+ P G+ R V R K+D +Y +P GKKLR+R+EV + N
Sbjct: 37 PKTPKGFKRSLVLRK---DYSKMDTYYITPTGKKLRSRNEVASYVEAN 81
>gi|324500550|gb|ADY40255.1| Bromodomain adjacent to zinc finger domain protein 2B [Ascaris
suum]
Length = 1509
Score = 37.7 bits (86), Expect = 0.76, Method: Composition-based stats.
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
L GW R+ R+ + + DV YY+PCGK+L + +EV++ + + NI + D
Sbjct: 314 LALGWRRQTCIRSISATGVRGDVIYYAPCGKRLGSYAEVIRYLNKRNITSIGRD 367
>gi|301607445|ref|XP_002933311.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
isoform 1 [Xenopus (Silurana) tropicalis]
Length = 2138
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 6/53 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE TR K LS G++ +V YY+PCGKK R EV++ + R I +S D
Sbjct: 733 GWQRE--TRIKNLS-GRLQGEVTYYAPCGKKFRQYPEVMKYLSRNGIMDISRD 782
>gi|348585937|ref|XP_003478727.1| PREDICTED: bromodomain adjacent to zinc finger domain protein
2B-like isoform 2 [Cavia porcellus]
Length = 2198
Score = 37.7 bits (86), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQ 69
GW RE RN G G++ +V YY+PCGKKLR EV++
Sbjct: 771 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIK 807
>gi|260799457|ref|XP_002594712.1| hypothetical protein BRAFLDRAFT_122791 [Branchiostoma floridae]
gi|229279948|gb|EEN50723.1| hypothetical protein BRAFLDRAFT_122791 [Branchiostoma floridae]
Length = 1962
Score = 37.7 bits (86), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 29 LPPGWYREEVTRNKGLSVG-KVDVFYYSPCGKKLRTRSEV 67
L GW RE R G G K DV Y +PCGKKLRT EV
Sbjct: 554 LEHGWRRETRIRAIGPGGGIKGDVCYLAPCGKKLRTYPEV 593
>gi|29421196|dbj|BAA96000.2| KIAA1476 protein [Homo sapiens]
Length = 2142
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQ 69
GW RE RN G G++ +V YY+PCGKKLR EV++
Sbjct: 760 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIK 796
>gi|113205660|ref|NP_001037916.1| methyl-CpG binding domain protein 4 [Xenopus (Silurana) tropicalis]
gi|89272695|emb|CAJ81414.1| methyl-CpG binding domain protein 4 [Xenopus (Silurana) tropicalis]
Length = 472
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRG----NIPGVSFDF 82
LP GW R R G + GK DV++ SP G LR+R + + + N+ FDF
Sbjct: 52 LPHGWKRIVKQRQSGKTSGKYDVYFVSPQGTTLRSRISLAKYLNNNKEINLKLEDFDF 109
>gi|345328058|ref|XP_003431230.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
isoform 2 [Ornithorhynchus anatinus]
Length = 2128
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQ 69
GW RE RN G G++ +V YY+PCGKKLR EV++
Sbjct: 696 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIK 732
>gi|426337492|ref|XP_004032738.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Gorilla gorilla gorilla]
Length = 2090
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQ 69
GW RE RN G G++ +V YY+PCGKKLR EV++
Sbjct: 686 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIK 722
>gi|334338449|ref|XP_001376329.2| PREDICTED: methyl-CpG-binding domain protein 4-like [Monodelphis
domestica]
Length = 486
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIR----GNIPGVSFDFRS 84
+P GW R R G + GK DV++ SP G KLR++S + + ++ FDFR+
Sbjct: 7 IPCGWERIVKQRLSGKTAGKYDVYFISPEGVKLRSKSSLACYLHKSGETSLKPEDFDFRA 66
>gi|14042407|dbj|BAB55231.1| unnamed protein product [Homo sapiens]
Length = 708
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQ 69
GW RE RN G G++ +V YY+PCGKKLR EV++
Sbjct: 83 GWQRETRIRNFG---GRLQGEVAYYAPCGKKLRQYPEVIK 119
>gi|313768101|ref|YP_004061532.1| hypothetical protein BpV1_102 [Bathycoccus sp. RCC1105 virus
BpV1]
gi|312599708|gb|ADQ91729.1| hypothetical protein BpV1_102 [Bathycoccus sp. RCC1105 virus
BpV1]
Length = 250
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 8 LSLVSNLLKMLPTKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
+S +++L K L +K + ++ WY + TR G S+G D +Y+SP GK+ R+ EV
Sbjct: 1 MSALNSLKKYLKSKGQ----EINDEWYVKIETRKSGKSMGMTDNYYFSPEGKRFRSMIEV 56
Query: 68 LQVI 71
+ +
Sbjct: 57 YRFL 60
>gi|326488565|dbj|BAJ93951.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326498931|dbj|BAK02451.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 272
Score = 37.7 bits (86), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%), Gaps = 1/48 (2%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
PQ PPGW R+ +T DV+Y P G+KLR+ EV + N
Sbjct: 146 PQTPPGWERK-ITLRSEQGTRFADVYYICPAGRKLRSMKEVERCFEDN 192
>gi|344245482|gb|EGW01586.1| Bromodomain adjacent to zinc finger domain protein 2B [Cricetulus
griseus]
Length = 1853
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQ 69
GW RE RN G G++ +V YY+PCGKKLR EV++
Sbjct: 551 GWPRETRVRNFG---GRLQGEVAYYAPCGKKLRQYPEVMK 587
>gi|341900623|gb|EGT56558.1| CBN-FLT-1 protein [Caenorhabditis brenneri]
Length = 1419
Score = 37.7 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 18/40 (45%), Positives = 24/40 (60%)
Query: 32 GWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVI 71
GW R+ R S K DV Y++PCGKKL T SE ++ +
Sbjct: 343 GWRRQTCVRAITASGVKGDVSYFAPCGKKLSTYSETVRYL 382
>gi|194763675|ref|XP_001963958.1| GF20982 [Drosophila ananassae]
gi|190618883|gb|EDV34407.1| GF20982 [Drosophila ananassae]
Length = 1280
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 32 GWYREEVTRNKGLSVGKV-DVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFR 83
GW RE V + G + DVF+ +P G+KLR+R +++ ++ G + F F+
Sbjct: 535 GWKRELVLPSNGNPKRRTGDVFFIAPSGRKLRSREDIIPLLEGELTIEHFCFQ 587
>gi|348516624|ref|XP_003445838.1| PREDICTED: bromodomain adjacent to zinc finger domain protein
2B-like [Oreochromis niloticus]
Length = 2378
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 4/52 (7%)
Query: 32 GWYREEVTRNKGLS-VGKVDVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE TR K ++ + +V YY+PCGKKLR +V++ + R I G++ D
Sbjct: 889 GWRRE--TRIKSVAGRPQGEVAYYAPCGKKLRQYPDVMKYLSRNGISGITRD 938
>gi|345323563|ref|XP_001507719.2| PREDICTED: methyl-CpG-binding domain protein 3-like
[Ornithorhynchus anatinus]
Length = 340
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 31/46 (67%)
Query: 53 YYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
Y+ P GKK R++ ++ + + ++ +FDFR+GK+ + ++N+QR
Sbjct: 83 YFCPSGKKFRSKPQLARYLGSSMDLSTFDFRTGKMLMSKMNKNRQR 128
>gi|354476573|ref|XP_003500499.1| PREDICTED: bromodomain adjacent to zinc finger domain protein
2B-like [Cricetulus griseus]
Length = 2117
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQ 69
GW RE RN G G++ +V YY+PCGKKLR EV++
Sbjct: 699 GWPRETRVRNFG---GRLQGEVAYYAPCGKKLRQYPEVMK 735
>gi|120975081|gb|ABM46832.1| MBD1 [Gorilla gorilla]
Length = 36
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFY 53
+CP L PGW R EV R G + G+ D +Y
Sbjct: 7 DCPALGPGWKRREVFRKSGATCGRSDTYY 35
>gi|351700534|gb|EHB03453.1| Methyl-CpG-binding domain protein 2, partial [Heterocephalus
glaber]
Length = 231
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 28/44 (63%)
Query: 55 SPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
SP GKK R++ ++ + + + SFDFR+GK+ + +NKQR
Sbjct: 1 SPSGKKFRSKPQLARYLGNTVDLSSFDFRTGKMMPSKLQKNKQR 44
>gi|426249701|ref|XP_004018588.1| PREDICTED: methyl-CpG-binding domain protein 4 [Ovis aries]
Length = 554
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 8/79 (10%)
Query: 25 EC-PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL----QVIRGNIPGVS 79
EC +P GW R R G + GK DV++ SP G+K R+R ++ Q ++
Sbjct: 76 ECRKSVPCGWERVVKQRASGKTAGKYDVYFISPQGQKFRSRVSLVNYLHQSGETSLKPED 135
Query: 80 FDFR---SGKLNSLQKHRN 95
FDF G + S K RN
Sbjct: 136 FDFSVRPKGSIKSGCKGRN 154
>gi|323451008|gb|EGB06887.1| hypothetical protein AURANDRAFT_65285 [Aureococcus anophagefferens]
Length = 2320
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 14/36 (38%), Positives = 22/36 (61%)
Query: 32 GWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
GW R +G + G DV+Y+ P G++ R+R+EV
Sbjct: 839 GWTATVEVRKEGNTAGTYDVYYFDPLGRRYRSRAEV 874
>gi|410950005|ref|XP_003981705.1| PREDICTED: methyl-CpG-binding domain protein 3 [Felis catus]
Length = 416
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 30/44 (68%)
Query: 55 SPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
SP GKK R++ ++ + + G++ +FDFR+GKL + R++QR
Sbjct: 162 SPSGKKFRSKPQLARYLGGSMDLSTFDFRTGKLLMSKASRSRQR 205
>gi|224014036|ref|XP_002296681.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220968536|gb|EED86882.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 936
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Query: 26 CPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRG 73
CP+L GW R V R K DV+Y P G+ R+ EV++ G
Sbjct: 31 CPELGEGWTRRIVARKK---TKASDVYYVHPDGRHFRSTKEVVRYFNG 75
>gi|395847220|ref|XP_003796279.1| PREDICTED: methyl-CpG-binding domain protein 4 [Otolemur garnettii]
Length = 574
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVSFDF 82
+P GW R R G + G+ DV+Y SP G K R++S + + N + FDF
Sbjct: 85 VPCGWERVVKQRLSGKTAGRFDVYYISPQGLKFRSKSSLANYLHKNGEMSLKPEDFDF 142
>gi|332020874|gb|EGI61272.1| F-box/LRR-repeat protein 7 [Acromyrmex echinatior]
Length = 1280
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%), Gaps = 2/42 (4%)
Query: 32 GWYREEVTRNKGLSVGK--VDVFYYSPCGKKLRTRSEVLQVI 71
GW RE V R S K D++YY+P GKK+R+ EV + +
Sbjct: 280 GWKRELVYRASNDSSSKKMADIYYYTPAGKKVRSFREVAESL 321
>gi|291234754|ref|XP_002737312.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 1482
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 2/52 (3%)
Query: 32 GWYREEVTRNKGLSVG-KVDVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
GW RE R G + +V YY+PCGKK++T EV++ + + I +S D
Sbjct: 716 GWRRETTIRQLGPGDRLRGEVVYYAPCGKKVKTYPEVIRYLEKHRITAISRD 767
>gi|242025014|ref|XP_002432921.1| hypothetical protein Phum_PHUM604760 [Pediculus humanus corporis]
gi|212518430|gb|EEB20183.1| hypothetical protein Phum_PHUM604760 [Pediculus humanus corporis]
Length = 1280
Score = 36.6 bits (83), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%), Gaps = 4/54 (7%)
Query: 32 GWYREEVTR---NKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDF 82
GW RE VTR +K + K DV+Y+ P GKKLR+ EV + + + +F F
Sbjct: 278 GWKREVVTRAITSKEDGISK-DVYYFHPSGKKLRSLREVSEKLTPGLTIENFTF 330
>gi|195168687|ref|XP_002025162.1| GL26896 [Drosophila persimilis]
gi|194108607|gb|EDW30650.1| GL26896 [Drosophila persimilis]
Length = 825
Score = 36.6 bits (83), Expect = 1.8, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 32 GWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDF 82
GW RE VT + L+ +FY SP GKK R SE++ +++G + F F
Sbjct: 36 GWTREVVTPSP-LTNSSNHIFYTSPSGKKCRKISEIIPMLQGELTKEHFIF 85
>gi|195178333|ref|XP_002029032.1| GL20679 [Drosophila persimilis]
gi|194117914|gb|EDW39957.1| GL20679 [Drosophila persimilis]
Length = 743
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 32 GWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDF 82
GW RE VT + L+ +FY SP GKK R SE++ +++G + F F
Sbjct: 36 GWTREVVTPSP-LTNSSNHIFYTSPSGKKCRKISEIIPMLQGELTKEHFIF 85
>gi|444509545|gb|ELV09340.1| Transcription factor E2-alpha [Tupaia chinensis]
Length = 833
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 31/44 (70%)
Query: 55 SPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
SP GKK R++ ++ + + G++ +FDFR+GK+ + ++++QR
Sbjct: 665 SPSGKKFRSKPQLARYLGGSMDLSTFDFRTGKMLMTKVNKSRQR 708
>gi|426386517|ref|XP_004059730.1| PREDICTED: uncharacterized protein LOC101131941 [Gorilla gorilla
gorilla]
Length = 613
Score = 36.6 bits (83), Expect = 1.9, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 31/44 (70%)
Query: 55 SPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
SP GKK R++ ++ + + G++ +FDFR+GK+ + ++++QR
Sbjct: 223 SPSGKKFRSKPQLARYLGGSMDLSTFDFRTGKMLMSKMNKSRQR 266
>gi|432866392|ref|XP_004070828.1| PREDICTED: methyl-CpG-binding domain protein 4-like [Oryzias
latipes]
Length = 440
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 32/65 (49%), Gaps = 4/65 (6%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVI----RGNIPGVSFDFRS 84
+PPGW + R G + GK+DV+ SP G R+++ + + N+ F+F S
Sbjct: 14 MPPGWNKVVKQRKTGKTAGKLDVYITSPSGLTFRSKASLQAFLVNSEEENLNLSLFEFTS 73
Query: 85 GKLNS 89
K S
Sbjct: 74 AKDKS 78
>gi|224056313|ref|XP_002187748.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
[Taeniopygia guttata]
Length = 2125
Score = 36.6 bits (83), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 5/43 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVIR 72
GW RE RN G G++ +V Y++PCGKKLR EV++ ++
Sbjct: 694 GWQRETRIRNFG---GRLQGEVAYFAPCGKKLRQYPEVVKGVQ 733
>gi|328722641|ref|XP_003247622.1| PREDICTED: hypothetical protein LOC100571019, partial
[Acyrthosiphon pisum]
Length = 730
Score = 36.6 bits (83), Expect = 2.2, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 32 GWYREEVTRNKGLS-VGKVDVFYYSPCGKKLRTRSEV 67
GW RE V R G S + DV+YYSP +KLR+ E+
Sbjct: 93 GWKRELVYRTSGQSTICNGDVYYYSPTNQKLRSLREI 129
>gi|45382753|ref|NP_990008.1| bromodomain adjacent to zinc finger domain protein 2B [Gallus
gallus]
gi|22653663|sp|Q9DE13.1|BAZ2B_CHICK RecName: Full=Bromodomain adjacent to zinc finger domain protein
2B; AltName: Full=Extracellular matrix protein F22
gi|11526817|gb|AAG36791.1|AF224275_1 extracellular matrix protein F22 [Gallus gallus]
Length = 2130
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 5/43 (11%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQVIR 72
GW RE RN G G++ +V Y++PCGKKLR EV++ ++
Sbjct: 700 GWQRETRIRNFG---GRLQGEVAYFAPCGKKLRQYPEVVKGVQ 739
>gi|355701346|gb|AES01653.1| methyl-CpG binding domain protein 3 [Mustela putorius furo]
Length = 254
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 31/44 (70%)
Query: 55 SPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
SP GKK R++ ++ + + G++ +FDFR+GK+ + +R++QR
Sbjct: 1 SPSGKKFRSKPQLARYLGGSMDLSTFDFRTGKMLVGKMNRSRQR 44
>gi|345786313|ref|XP_003432809.1| PREDICTED: methyl-CpG-binding domain protein 4 [Canis lupus
familiaris]
Length = 570
Score = 36.2 bits (82), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%), Gaps = 5/63 (7%)
Query: 25 ECPQ-LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVS 79
EC + +P GW R R G + G+ DV++ SP G K R++S + + + N +
Sbjct: 79 ECHKTVPCGWERVVKQRLSGKTAGRYDVYFISPQGLKFRSKSSLAKYLHKNEETSLTPED 138
Query: 80 FDF 82
FDF
Sbjct: 139 FDF 141
>gi|354480952|ref|XP_003502667.1| PREDICTED: methyl-CpG-binding domain protein 3-like [Cricetulus
griseus]
Length = 370
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 44 LSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGK--LNSLQKHRNKQR 98
L G V+ P GKK R++ ++ + + G++ +FDFR+GK +N + K R + R
Sbjct: 111 LKHGVVETPGVCPSGKKFRSKPQLARYLGGSMDLSTFDFRTGKMLMNKMNKSRQRVR 167
>gi|156398263|ref|XP_001638108.1| predicted protein [Nematostella vectensis]
gi|156225226|gb|EDO46045.1| predicted protein [Nematostella vectensis]
Length = 74
Score = 36.2 bits (82), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV---LQVIRGNIPGVSFDF 82
+P GW + R+KG + G DV+ P G+K R+++E+ L + ++ FDF
Sbjct: 18 VPTGWVKIVTQRSKGKTKGTYDVYIVDPDGRKFRSKAELKRFLDKSQSDLTIEDFDF 74
>gi|195111106|ref|XP_002000120.1| GI10057 [Drosophila mojavensis]
gi|193916714|gb|EDW15581.1| GI10057 [Drosophila mojavensis]
Length = 1224
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
+LPPGW + R+ L GK DV SP GK+ R++S++
Sbjct: 465 RLPPGWIKHMYQRSNVL--GKWDVILVSPSGKRFRSKSDL 502
>gi|195389218|ref|XP_002053274.1| GJ23793 [Drosophila virilis]
gi|194151360|gb|EDW66794.1| GJ23793 [Drosophila virilis]
Length = 1220
Score = 36.2 bits (82), Expect = 2.4, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
+LPPGW + R+ L GK DV SP GK+ R++S++
Sbjct: 459 RLPPGWIKHMYQRSNVL--GKWDVILVSPSGKRFRSKSDL 496
>gi|326923162|ref|XP_003207809.1| PREDICTED: bromodomain adjacent to zinc finger domain protein
2B-like [Meleagris gallopavo]
Length = 2126
Score = 36.2 bits (82), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQ 69
GW RE RN G G++ +V Y++PCGKKLR EV++
Sbjct: 695 GWQRETRIRNFG---GRLQGEVAYFAPCGKKLRQYPEVVK 731
>gi|195445346|ref|XP_002070285.1| GK11973 [Drosophila willistoni]
gi|194166370|gb|EDW81271.1| GK11973 [Drosophila willistoni]
Length = 1153
Score = 36.2 bits (82), Expect = 2.6, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
+LPPGW + R+ L GK DV SP GK+ R++S++
Sbjct: 454 RLPPGWVKHMYQRSNVL--GKWDVILVSPSGKRFRSKSDL 491
>gi|410951752|ref|XP_003982557.1| PREDICTED: methyl-CpG-binding domain protein 4 [Felis catus]
Length = 566
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 25 EC-PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVS 79
EC +P GW R R G + G+ DV++ SP G K R++S + + + N +
Sbjct: 76 ECRKSVPCGWERVVKQRLSGKTAGRYDVYFISPQGLKFRSKSSLAKYLHKNGETSLTPED 135
Query: 80 FDF 82
FDF
Sbjct: 136 FDF 138
>gi|26326841|dbj|BAC27164.1| unnamed protein product [Mus musculus]
Length = 861
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 5/33 (15%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLR 62
GW RE RN G G++ +V YY+PCGKKLR
Sbjct: 703 GWQRETRVRNFG---GRLPGEVAYYAPCGKKLR 732
>gi|301607447|ref|XP_002933312.1| PREDICTED: bromodomain adjacent to zinc finger domain protein 2B
isoform 2 [Xenopus (Silurana) tropicalis]
Length = 2088
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/40 (52%), Positives = 27/40 (67%), Gaps = 5/40 (12%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQ 69
GW RE TR K LS G++ +V YY+PCGKK R EV++
Sbjct: 673 GWQRE--TRIKNLS-GRLQGEVTYYAPCGKKFRQYPEVMK 709
>gi|24646242|ref|NP_650178.1| MBD-R2, isoform A [Drosophila melanogaster]
gi|7299595|gb|AAF54780.1| MBD-R2, isoform A [Drosophila melanogaster]
gi|21064845|gb|AAM29652.1| SD10773p [Drosophila melanogaster]
Length = 1081
Score = 36.2 bits (82), Expect = 2.7, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
+LPPGW + R+ L GK DV SP GK+ R++S++
Sbjct: 366 RLPPGWIKHMYQRSNVL--GKWDVILVSPSGKRFRSKSDL 403
>gi|156398267|ref|XP_001638110.1| predicted protein [Nematostella vectensis]
gi|156225228|gb|EDO46047.1| predicted protein [Nematostella vectensis]
Length = 74
Score = 36.2 bits (82), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 3/57 (5%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV---LQVIRGNIPGVSFDF 82
+P GW + R+KG + G DV+ P G+K R+++E+ L + ++ FDF
Sbjct: 18 VPTGWVKIVTQRSKGKTKGTYDVYIVDPDGRKFRSKAELKRFLDKSQSDLTIEDFDF 74
>gi|224059490|ref|XP_002299872.1| methyl binding domain protein [Populus trichocarpa]
gi|118483055|gb|ABK93437.1| unknown [Populus trichocarpa]
gi|222847130|gb|EEE84677.1| methyl binding domain protein [Populus trichocarpa]
Length = 214
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
Query: 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSP-CGKKLRTRSEV 67
+ LPPGW E+ R G + G D +Y P G++ R++ +V
Sbjct: 70 DTSWLPPGWVVEDRVRTSGATAGTRDKYYIEPVSGRRFRSKKDV 113
>gi|45551883|ref|NP_731688.2| MBD-R2, isoform B [Drosophila melanogaster]
gi|45446463|gb|AAF54781.2| MBD-R2, isoform B [Drosophila melanogaster]
Length = 1169
Score = 36.2 bits (82), Expect = 2.8, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
+LPPGW + R+ L GK DV SP GK+ R++S++
Sbjct: 454 RLPPGWIKHMYQRSNVL--GKWDVILVSPSGKRFRSKSDL 491
>gi|357502293|ref|XP_003621435.1| hypothetical protein MTR_7g013320 [Medicago truncatula]
gi|355496450|gb|AES77653.1| hypothetical protein MTR_7g013320 [Medicago truncatula]
Length = 123
Score = 36.2 bits (82), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 29/58 (50%), Gaps = 8/58 (13%)
Query: 30 PPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKL 87
P G+ R V RN K+D +Y +P G+KLR R+E + FDF S K+
Sbjct: 68 PQGFKRTLVLRN---DYSKLDSYYITPTGEKLRARNE-----PSGVSASDFDFSSQKI 117
>gi|417411695|gb|JAA52275.1| Putative methyl-cpg binding transcription regulator, partial
[Desmodus rotundus]
Length = 570
Score = 35.8 bits (81), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVSFDF 82
+P GW R R G + G+ DV++ SP G K R++S + + N + FDF
Sbjct: 83 VPSGWERVVKQRLSGKTAGRYDVYFISPQGLKFRSKSSLANYLHKNEETSLKPEDFDF 140
>gi|431899948|gb|ELK07895.1| Methyl-CpG-binding domain protein 4 [Pteropus alecto]
Length = 664
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 25 ECPQ-LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVS 79
EC + +P GW R R G + G+ DV++ SP G K R++S + + N +
Sbjct: 168 ECHKSVPCGWKRVVKQRVSGKTAGRYDVYFISPQGLKFRSKSSLANYLHKNEETSLKPED 227
Query: 80 FDF 82
FDF
Sbjct: 228 FDF 230
>gi|2827551|emb|CAA16559.1| predicted protein [Arabidopsis thaliana]
gi|7269120|emb|CAB79229.1| predicted protein [Arabidopsis thaliana]
Length = 566
Score = 35.8 bits (81), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
P+ P G+ R + R K+D +Y +P GKKL++R+E+ I N
Sbjct: 112 PRTPRGFKRSLILRK---DYSKMDAYYITPTGKKLKSRNEIAAFIDAN 156
>gi|223996861|ref|XP_002288104.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220977220|gb|EED95547.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 615
Score = 35.8 bits (81), Expect = 3.0, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRS 65
LP GW E R G S G D ++YSP KKL+ RS
Sbjct: 546 LPAGWTTETYERQTGKSAGSKDTYFYSPV-KKLKFRS 581
>gi|395516662|ref|XP_003762506.1| PREDICTED: methyl-CpG-binding domain protein 4 [Sarcophilus
harrisii]
Length = 359
Score = 35.8 bits (81), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 4/60 (6%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIR----GNIPGVSFDFRS 84
+P GW R R G + GK DV++ SP G KLR++S + + ++ FDFR+
Sbjct: 41 VPCGWERIVKQRLSGKTAGKYDVYFISPEGVKLRSKSLLACYLHKSGETSLKPEDFDFRA 100
>gi|29692021|gb|AAO91662.1| methyl-CpG binding protein 3a [Danio rerio]
Length = 241
Score = 35.8 bits (81), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 31/44 (70%)
Query: 55 SPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
SP GKK R++ ++++ + ++ SFDFR+GK+ + ++N+QR
Sbjct: 5 SPTGKKFRSKPQLVRYLGKSMDLSSFDFRTGKMLMSKLNKNRQR 48
>gi|307191284|gb|EFN74931.1| Tudor domain-containing protein PHF20L1 [Camponotus floridanus]
Length = 1260
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 24/41 (58%), Gaps = 1/41 (2%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDV-FYYSPCGKKLRTRSEV 67
+LP GW + R G S GK DV F + GKK R+R+++
Sbjct: 524 RLPSGWEKHFTQRKAGTSAGKWDVLFIHKQTGKKFRSRNDI 564
>gi|195329598|ref|XP_002031497.1| GM26024 [Drosophila sechellia]
gi|194120440|gb|EDW42483.1| GM26024 [Drosophila sechellia]
Length = 1130
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
+LPPGW + R+ L GK DV SP GK+ R++S++
Sbjct: 451 RLPPGWIKHMYQRSNVL--GKWDVILVSPSGKRFRSKSDL 488
>gi|194901796|ref|XP_001980437.1| GG17141 [Drosophila erecta]
gi|190652140|gb|EDV49395.1| GG17141 [Drosophila erecta]
Length = 1173
Score = 35.8 bits (81), Expect = 3.3, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
+LPPGW + R+ L GK DV SP GK+ R++S++
Sbjct: 452 RLPPGWIKHMYQRSNVL--GKWDVILVSPSGKRFRSKSDL 489
>gi|148699601|gb|EDL31548.1| methyl-CpG binding domain protein 3, isoform CRA_a [Mus musculus]
Length = 209
Score = 35.8 bits (81), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 55 SPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGK--LNSLQKHRNKQR 98
SP GKK R++ ++ + + G++ +FDFR+GK +N + K R + R
Sbjct: 5 SPSGKKFRSKPQLARYLGGSMDLSTFDFRTGKMLMNKMNKSRQRVR 50
>gi|195571495|ref|XP_002103738.1| GD20581 [Drosophila simulans]
gi|194199665|gb|EDX13241.1| GD20581 [Drosophila simulans]
Length = 1169
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
+LPPGW + R+ L GK DV SP GK+ R++S++
Sbjct: 451 RLPPGWIKHMYQRSNVL--GKWDVILVSPSGKRFRSKSDL 488
>gi|195500404|ref|XP_002097359.1| GE24531 [Drosophila yakuba]
gi|194183460|gb|EDW97071.1| GE24531 [Drosophila yakuba]
Length = 1175
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
+LPPGW + R+ L GK DV SP GK+ R++S++
Sbjct: 454 RLPPGWIKHMYQRSNVL--GKWDVILVSPSGKRFRSKSDL 491
>gi|194741788|ref|XP_001953369.1| GF17728 [Drosophila ananassae]
gi|190626428|gb|EDV41952.1| GF17728 [Drosophila ananassae]
Length = 1184
Score = 35.8 bits (81), Expect = 3.4, Method: Composition-based stats.
Identities = 17/40 (42%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
+LPPGW + R+ L GK DV SP GK+ R++S++
Sbjct: 462 RLPPGWIKHMYQRSNVL--GKWDVILVSPSGKRFRSKSDL 499
>gi|50510945|dbj|BAD32458.1| mKIAA1476 protein [Mus musculus]
Length = 1369
Score = 35.8 bits (81), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 5/33 (15%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLR 62
GW RE RN G G++ +V YY+PCGKKLR
Sbjct: 768 GWQRETRVRNFG---GRLPGEVAYYAPCGKKLR 797
>gi|224087333|ref|XP_002308125.1| methyl binding domain protein [Populus trichocarpa]
gi|222854101|gb|EEE91648.1| methyl binding domain protein [Populus trichocarpa]
Length = 328
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
Q PPGW R R +G S DV+Y SP GK+LR+ EV
Sbjct: 177 QPPPGWQRLLRIRGEG-SSKFADVYYQSPSGKRLRSMVEV 215
>gi|297799740|ref|XP_002867754.1| hypothetical protein ARALYDRAFT_914336 [Arabidopsis lyrata subsp.
lyrata]
gi|297313590|gb|EFH44013.1| hypothetical protein ARALYDRAFT_914336 [Arabidopsis lyrata subsp.
lyrata]
Length = 176
Score = 35.8 bits (81), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
P+ P G+ R + R K+D +Y +P GKKL++R+E+ I N
Sbjct: 92 PKTPRGFKRSLILRK---DYSKMDAYYITPTGKKLKSRNEIAAFIDAN 136
>gi|403308197|ref|XP_003944557.1| PREDICTED: methyl-CpG-binding domain protein 3 [Saimiri
boliviensis boliviensis]
Length = 294
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 31/44 (70%)
Query: 55 SPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
SP GKK R++ ++ + + G++ +FDFR+GK+ + ++++QR
Sbjct: 40 SPSGKKFRSKPQLARYLGGSMDLSTFDFRTGKMLMSKMNKSRQR 83
>gi|328785668|ref|XP_003250633.1| PREDICTED: methyl-CpG-binding domain protein 3 isoform 1 [Apis
mellifera]
Length = 205
Score = 35.8 bits (81), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 14/97 (14%)
Query: 15 LKMLPTKKRYECPQLPPGW-YREEVTR---NKGLSVGKVDVFYYSPCGKKLRTRSEVLQV 70
+ M KK+Y LP W REE +R N+ S GKVDV+YYS + +R + ++
Sbjct: 1 MNMSVEKKKYPS-ALPTNWPSREEASRKSQNQLSSTGKVDVYYYS---RGVRNDASLVPP 56
Query: 71 IRGNI-----PGVSFDFRSGKLNSLQKHRNKQRGNQF 102
IR P + + GK+ + KH N+++ Q
Sbjct: 57 IRQTASIFKQPVTIYKTQEGKVKDI-KHGNQEKPKQL 92
>gi|30685914|ref|NP_567667.2| methyl-CPG-binding domain 1 [Arabidopsis thaliana]
gi|75110947|sp|Q5XEN5.1|MBD1_ARATH RecName: Full=Methyl-CpG-binding domain-containing protein 1;
Short=AtMBD1; Short=MBD01; AltName:
Full=Methyl-CpG-binding protein MBD1
gi|54261715|gb|AAV31161.1| At4g22745 [Arabidopsis thaliana]
gi|58331793|gb|AAW70394.1| At4g22745 [Arabidopsis thaliana]
gi|332659248|gb|AEE84648.1| methyl-CPG-binding domain 1 [Arabidopsis thaliana]
Length = 204
Score = 35.8 bits (81), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 3/48 (6%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
P+ P G+ R + R K+D +Y +P GKKL++R+E+ I N
Sbjct: 118 PRTPRGFKRSLILRK---DYSKMDAYYITPTGKKLKSRNEIAAFIDAN 162
>gi|444518241|gb|ELV12052.1| Bromodomain adjacent to zinc finger domain protein 2A [Tupaia
chinensis]
Length = 1527
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 1/44 (2%)
Query: 32 GWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNI 75
GW R EV KG + + +YYSPCGK+++ EV++ + N+
Sbjct: 374 GW-RREVRIKKGSHRWQGETWYYSPCGKRMKQFPEVIKYLSRNV 416
>gi|328785670|ref|XP_003250634.1| PREDICTED: methyl-CpG-binding domain protein 3 isoform 2 [Apis
mellifera]
Length = 194
Score = 35.4 bits (80), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 14/97 (14%)
Query: 15 LKMLPTKKRYECPQLPPGW-YREEVTR---NKGLSVGKVDVFYYSPCGKKLRTRSEVLQV 70
+ M KK+Y LP W REE +R N+ S GKVDV+YYS + +R + ++
Sbjct: 1 MNMSVEKKKYPS-ALPTNWPSREEASRKSQNQLSSTGKVDVYYYS---RGVRNDASLVPP 56
Query: 71 IRGNI-----PGVSFDFRSGKLNSLQKHRNKQRGNQF 102
IR P + + GK+ + KH N+++ Q
Sbjct: 57 IRQTASIFKQPVTIYKTQEGKVKDI-KHGNQEKPKQL 92
>gi|23398550|gb|AAH38264.1| Mbd3 protein [Mus musculus]
gi|148699602|gb|EDL31549.1| methyl-CpG binding domain protein 3, isoform CRA_b [Mus musculus]
Length = 253
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 55 SPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGK--LNSLQKHRNKQR 98
SP GKK R++ ++ + + G++ +FDFR+GK +N + K R + R
Sbjct: 5 SPSGKKFRSKPQLARYLGGSMDLSTFDFRTGKMLMNKMNKSRQRVR 50
>gi|149034545|gb|EDL89282.1| methyl-CpG binding domain protein 3 (predicted), isoform CRA_c
[Rattus norvegicus]
gi|149034546|gb|EDL89283.1| methyl-CpG binding domain protein 3 (predicted), isoform CRA_c
[Rattus norvegicus]
Length = 254
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 55 SPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGK--LNSLQKHRNKQR 98
SP GKK R++ ++ + + G++ +FDFR+GK +N + K R + R
Sbjct: 5 SPSGKKFRSKPQLARYLGGSMDLSTFDFRTGKMLMNKMNKSRQRVR 50
>gi|357607057|gb|EHJ65338.1| hypothetical protein KGM_11404 [Danaus plexippus]
Length = 1453
Score = 35.4 bits (80), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 26/45 (57%)
Query: 23 RYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
+ E +LPPGW + V R+ G S GK DV P ++ T++++
Sbjct: 765 QVEDKRLPPGWTKLMVRRSFGQSAGKWDVVLVGPENRRFHTKTDI 809
>gi|197097392|ref|NP_001125147.1| methyl-CpG-binding domain protein 3 [Pongo abelii]
gi|55727124|emb|CAH90318.1| hypothetical protein [Pongo abelii]
Length = 259
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 31/44 (70%)
Query: 55 SPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
SP GKK R++ ++ + + G++ +FDFR+GK+ + ++++QR
Sbjct: 5 SPSGKKFRSKPQLARYLGGSMDLSTFDFRTGKMLMSKMNKSRQR 48
>gi|340715367|ref|XP_003396186.1| PREDICTED: methyl-CpG-binding domain protein 3-like isoform 1
[Bombus terrestris]
Length = 205
Score = 35.4 bits (80), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 14/97 (14%)
Query: 15 LKMLPTKKRYECPQLPPGW-YREEVTR---NKGLSVGKVDVFYYSPCGKKLRTRSEVLQV 70
+ M KK+Y LP W REE +R N+ S GKVDV+YYS + +R + ++
Sbjct: 1 MNMSVEKKKYPS-ALPTNWPIREEASRKSQNQLSSTGKVDVYYYS---RGVRNDASLVPP 56
Query: 71 IRGNI-----PGVSFDFRSGKLNSLQKHRNKQRGNQF 102
IR P + + GK+ + KH N+++ Q
Sbjct: 57 IRQTASIFKQPVTIYKTQEGKVKDV-KHGNQEKPKQL 92
>gi|27694450|gb|AAH43619.1| MBD3 protein [Homo sapiens]
gi|45708422|gb|AAH09372.1| MBD3 protein [Homo sapiens]
gi|119589886|gb|EAW69480.1| methyl-CpG binding domain protein 3, isoform CRA_c [Homo sapiens]
Length = 259
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 31/44 (70%)
Query: 55 SPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
SP GKK R++ ++ + + G++ +FDFR+GK+ + ++++QR
Sbjct: 5 SPSGKKFRSKPQLARYLGGSMDLSTFDFRTGKMLMSKMNKSRQR 48
>gi|311248259|ref|XP_003123042.1| PREDICTED: methyl-CpG-binding domain protein 3-like isoform 1
[Sus scrofa]
Length = 259
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 31/44 (70%)
Query: 55 SPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
SP GKK R++ ++ + + G++ +FDFR+GK+ + ++++QR
Sbjct: 5 SPSGKKFRSKPQLARYLGGSMDLSTFDFRTGKMLMSKMNKSRQR 48
>gi|62177117|ref|NP_001001182.2| bromodomain adjacent to zinc finger domain, 2B [Mus musculus]
Length = 2123
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 5/33 (15%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLR 62
GW RE RN G G++ +V YY+PCGKKLR
Sbjct: 703 GWQRETRVRNFG---GRLPGEVAYYAPCGKKLR 732
>gi|340715371|ref|XP_003396188.1| PREDICTED: methyl-CpG-binding domain protein 3-like isoform 3
[Bombus terrestris]
Length = 194
Score = 35.4 bits (80), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 14/97 (14%)
Query: 15 LKMLPTKKRYECPQLPPGW-YREEVTR---NKGLSVGKVDVFYYSPCGKKLRTRSEVLQV 70
+ M KK+Y LP W REE +R N+ S GKVDV+YYS + +R + ++
Sbjct: 1 MNMSVEKKKYPS-ALPTNWPIREEASRKSQNQLSSTGKVDVYYYS---RGVRNDASLVPP 56
Query: 71 IRGNI-----PGVSFDFRSGKLNSLQKHRNKQRGNQF 102
IR P + + GK+ + KH N+++ Q
Sbjct: 57 IRQTASIFKQPVTIYKTQEGKVKDV-KHGNQEKPKQL 92
>gi|294632373|ref|ZP_06710933.1| conserved hypothetical protein [Streptomyces sp. e14]
gi|292835706|gb|EFF94055.1| conserved hypothetical protein [Streptomyces sp. e14]
Length = 515
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 23/63 (36%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 18 LPTKKRYECPQLPPGWYREEVTRNKGLSVG-KVDVFYYSPCGKKLRTRSEVLQVIRGNIP 76
+PT +RY PPG VT + LS G +V V++Y P GK R R ++ + G +
Sbjct: 162 VPTTRRY-----PPG-LASVVTEHWSLSTGSRVAVYHYPPAGKSPRQRIPLVYLNGGPVR 215
Query: 77 GVS 79
G+S
Sbjct: 216 GIS 218
>gi|157823119|ref|NP_001101730.1| bromodomain adjacent to zinc finger domain protein 2B [Rattus
norvegicus]
gi|149047773|gb|EDM00389.1| bromodomain adjacent to zinc finger domain, 2B (predicted) [Rattus
norvegicus]
Length = 2191
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 26/40 (65%), Gaps = 5/40 (12%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLRTRSEVLQ 69
GW RE RN G G++ +V YY+PCGKKLR ++++
Sbjct: 763 GWQRETRVRNFG---GRLPGEVTYYAPCGKKLRQYPDMIK 799
>gi|355702937|gb|EHH29428.1| Methyl-CpG-binding protein MBD3, partial [Macaca mulatta]
Length = 255
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 31/44 (70%)
Query: 55 SPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
SP GKK R++ ++ + + G++ +FDFR+GK+ + ++++QR
Sbjct: 1 SPSGKKFRSKPQLARYLGGSMDLSTFDFRTGKMLMSKMNKSRQR 44
>gi|148695007|gb|EDL26954.1| bromodomain adjacent to zinc finger domain, 2B [Mus musculus]
Length = 2193
Score = 35.4 bits (80), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 5/33 (15%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLR 62
GW RE RN G G++ +V YY+PCGKKLR
Sbjct: 764 GWQRETRVRNFG---GRLPGEVAYYAPCGKKLR 793
>gi|268575312|ref|XP_002642635.1| C. briggsae CBR-FLT-1 protein [Caenorhabditis briggsae]
Length = 1367
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 32 GWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
GW R+ V ++ S K DV Y++P GKK+ T SE ++ + N
Sbjct: 331 GWRRQTVVKSIAASGVKGDVAYFAPDGKKMSTYSEAVRYLAKN 373
>gi|312094131|ref|XP_003147919.1| hypothetical protein LOAG_12358 [Loa loa]
Length = 702
Score = 35.4 bits (80), Expect = 4.2, Method: Composition-based stats.
Identities = 16/39 (41%), Positives = 23/39 (58%)
Query: 33 WYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVI 71
W R+ R S + DV YY+PCGKKL + +EV + +
Sbjct: 1 WRRQTCIRTISASGVRGDVIYYAPCGKKLGSYAEVTRYL 39
>gi|449279581|gb|EMC87153.1| Methyl-CpG-binding domain protein 3, partial [Columba livia]
Length = 201
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 31/46 (67%)
Query: 53 YYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
+ SP GKK R++ ++ + + ++ +FDFR+GK+ + ++N+QR
Sbjct: 10 FLSPSGKKFRSKPQLARYLGSSMDLGTFDFRTGKMLMNKMNKNRQR 55
>gi|223462537|gb|AAI50815.1| Baz2b protein [Mus musculus]
Length = 2158
Score = 35.4 bits (80), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 5/33 (15%)
Query: 32 GWYREEVTRNKGLSVGKV--DVFYYSPCGKKLR 62
GW RE RN G G++ +V YY+PCGKKLR
Sbjct: 764 GWQRETRVRNFG---GRLPGEVAYYAPCGKKLR 793
>gi|359478635|ref|XP_003632148.1| PREDICTED: methyl-CpG-binding domain-containing protein 6-like
[Vitis vinifera]
Length = 297
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSP-CGKKLRTRSEV 67
LPPGW E R+ G S G D ++ P G++ R++ EV
Sbjct: 172 LPPGWIVEGRVRSSGASAGSRDKYFIEPITGRRFRSKKEV 211
>gi|187469796|gb|AAI67041.1| Mbd3 protein [Rattus norvegicus]
Length = 308
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 55 SPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGK--LNSLQKHRNKQR 98
SP GKK R++ ++ + + G++ +FDFR+GK +N + K R + R
Sbjct: 59 SPSGKKFRSKPQLARYLGGSMDLSTFDFRTGKMLMNKMNKSRQRVR 104
>gi|293346999|ref|XP_002726494.1| PREDICTED: methyl-CpG-binding domain protein 4 [Rattus norvegicus]
gi|392347546|ref|XP_001059437.3| PREDICTED: methyl-CpG-binding domain protein 4 [Rattus norvegicus]
Length = 566
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 25 ECPQ-LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSE----VLQVIRGNIPGVS 79
EC + +P GW R R G + G+VDV++ SP G K R++ +L+ +
Sbjct: 73 ECHKPVPCGWERVVKQRLSGKTAGRVDVYFISPQGSKFRSKRSLANYLLKTGETCLKPED 132
Query: 80 FDF---RSGKLNSLQKHRN 95
FDF G +N KH++
Sbjct: 133 FDFTVLSKGGINPGYKHQS 151
>gi|147800416|emb|CAN62048.1| hypothetical protein VITISV_026045 [Vitis vinifera]
Length = 114
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 25/40 (62%), Gaps = 4/40 (10%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL 68
L PGW EE T ++ G+V +YY P G+ RT++EVL
Sbjct: 66 LLPGWLAEERT----VANGRVYRYYYDPSGRLYRTKNEVL 101
>gi|449465348|ref|XP_004150390.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like
[Cucumis sativus]
Length = 342
Score = 35.4 bits (80), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
Q PPGW R R +G S DV+Y +P GKKLR+ ++
Sbjct: 177 QPPPGWQRLLHIRGEG-STKFADVYYTAPSGKKLRSMVDI 215
>gi|149049684|gb|EDM02138.1| rCG29635 [Rattus norvegicus]
Length = 566
Score = 35.4 bits (80), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 8/79 (10%)
Query: 25 ECPQ-LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSE----VLQVIRGNIPGVS 79
EC + +P GW R R G + G+VDV++ SP G K R++ +L+ +
Sbjct: 73 ECHKPVPCGWERVVKQRLSGKTAGRVDVYFISPQGSKFRSKRSLANYLLKTGETCLKPED 132
Query: 80 FDF---RSGKLNSLQKHRN 95
FDF G +N KH++
Sbjct: 133 FDFTVLSKGGINPGYKHQS 151
>gi|449508228|ref|XP_004163256.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like,
partial [Cucumis sativus]
Length = 268
Score = 35.4 bits (80), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
Q PPGW R R +G S DV+Y +P GKKLR+ ++
Sbjct: 177 QPPPGWQRLLHIRGEG-STKFADVYYTAPSGKKLRSMVDI 215
>gi|308467299|ref|XP_003095898.1| CRE-FLT-1 protein [Caenorhabditis remanei]
gi|308244269|gb|EFO88221.1| CRE-FLT-1 protein [Caenorhabditis remanei]
Length = 1411
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVI 71
L GW R+ R+ S K DV Y++P GKKL T SEV++ +
Sbjct: 335 LQMGWRRQTCVRSITASGVKGDVSYFAPDGKKLSTYSEVVRYL 377
>gi|115479913|ref|NP_001063550.1| Os09g0494300 [Oryza sativa Japonica Group]
gi|113631783|dbj|BAF25464.1| Os09g0494300 [Oryza sativa Japonica Group]
gi|215715253|dbj|BAG95004.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 315
Score = 35.0 bits (79), Expect = 5.0, Method: Composition-based stats.
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 30 PPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
PPGW R+ R +G DV+Y SP G+KLR+ E+
Sbjct: 149 PPGWERQIRIRGEG-GTKFADVYYTSPTGRKLRSLVEI 185
>gi|383860750|ref|XP_003705852.1| PREDICTED: methyl-CpG-binding domain protein 3-like [Megachile
rotundata]
Length = 223
Score = 35.0 bits (79), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 14/96 (14%)
Query: 15 LKMLPTKKRYECPQLPPGW-YREEVTR---NKGLSVGKVDVFYYSPCGKKLRTRSEVLQV 70
+ M KK+Y LP W REE +R N+ S GKVDV+YYS + +R + ++
Sbjct: 1 MNMSVEKKKYPS-ALPTNWPTREETSRKSQNQLSSTGKVDVYYYS---RGVRNDASLVPP 56
Query: 71 IRGNI-----PGVSFDFRSGKLNSLQKHRNKQRGNQ 101
IR P + + GK+ + KH N+++ Q
Sbjct: 57 IRQTASIFKQPVTIYKTQEGKVKDI-KHGNQEKPKQ 91
>gi|110757525|ref|XP_392422.2| PREDICTED: methyl-CpG-binding domain protein 3 isoform 3 [Apis
mellifera]
Length = 223
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 14/96 (14%)
Query: 15 LKMLPTKKRYECPQLPPGW-YREEVTR---NKGLSVGKVDVFYYSPCGKKLRTRSEVLQV 70
+ M KK+Y LP W REE +R N+ S GKVDV+YYS + +R + ++
Sbjct: 1 MNMSVEKKKYPS-ALPTNWPSREEASRKSQNQLSSTGKVDVYYYS---RGVRNDASLVPP 56
Query: 71 IRGNI-----PGVSFDFRSGKLNSLQKHRNKQRGNQ 101
IR P + + GK+ + KH N+++ Q
Sbjct: 57 IRQTASIFKQPVTIYKTQEGKVKDI-KHGNQEKPKQ 91
>gi|432853521|ref|XP_004067748.1| PREDICTED: methyl-CpG-binding domain protein 3-like isoform 2
[Oryzias latipes]
Length = 242
Score = 35.0 bits (79), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 29/44 (65%)
Query: 55 SPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
SP GKK R++ ++ + + + SFDFR+GK+ + ++N+QR
Sbjct: 5 SPSGKKFRSKPQLARYLGNQMDLSSFDFRTGKMLMSKLNKNRQR 48
>gi|224118772|ref|XP_002331442.1| methyl binding domain protein [Populus trichocarpa]
gi|222873656|gb|EEF10787.1| methyl binding domain protein [Populus trichocarpa]
Length = 343
Score = 35.0 bits (79), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
Q PPGW R R +G S DV+Y +P GK+LR+ E+
Sbjct: 178 QPPPGWQRLLRIRGEG-STKFADVYYQAPSGKRLRSMVEI 216
>gi|149034547|gb|EDL89284.1| methyl-CpG binding domain protein 3 (predicted), isoform CRA_d
[Rattus norvegicus]
Length = 125
Score = 35.0 bits (79), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 30/46 (65%), Gaps = 2/46 (4%)
Query: 55 SPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGK--LNSLQKHRNKQR 98
SP GKK R++ ++ + + G++ +FDFR+GK +N + K R + R
Sbjct: 5 SPSGKKFRSKPQLARYLGGSMDLSTFDFRTGKMLMNKMNKSRQRVR 50
>gi|340715369|ref|XP_003396187.1| PREDICTED: methyl-CpG-binding domain protein 3-like isoform 2
[Bombus terrestris]
Length = 223
Score = 35.0 bits (79), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 14/96 (14%)
Query: 15 LKMLPTKKRYECPQLPPGW-YREEVTR---NKGLSVGKVDVFYYSPCGKKLRTRSEVLQV 70
+ M KK+Y LP W REE +R N+ S GKVDV+YYS + +R + ++
Sbjct: 1 MNMSVEKKKYPS-ALPTNWPIREEASRKSQNQLSSTGKVDVYYYS---RGVRNDASLVPP 56
Query: 71 IRGNI-----PGVSFDFRSGKLNSLQKHRNKQRGNQ 101
IR P + + GK+ + KH N+++ Q
Sbjct: 57 IRQTASIFKQPVTIYKTQEGKVKDV-KHGNQEKPKQ 91
>gi|357145156|ref|XP_003573545.1| PREDICTED: uncharacterized protein LOC100834821 [Brachypodium
distachyon]
Length = 1048
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%), Gaps = 3/55 (5%)
Query: 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPC-GKKLRTRSEVLQVIR-GNIPGVSF 80
QLP GW RE+ R G S K D +Y P G + R+ +V + I+ G+I SF
Sbjct: 320 QLPDGWRREDRPRRNG-STNKTDPYYIDPVNGYEFRSMKDVHRYIKSGDIKQCSF 373
>gi|350414650|ref|XP_003490379.1| PREDICTED: methyl-CpG-binding domain protein 3-like [Bombus
impatiens]
Length = 223
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 48/96 (50%), Gaps = 14/96 (14%)
Query: 15 LKMLPTKKRYECPQLPPGW-YREEVTR---NKGLSVGKVDVFYYSPCGKKLRTRSEVLQV 70
+ M KK+Y LP W REE +R N+ S GKVDV+YYS + +R + ++
Sbjct: 1 MNMSVEKKKYPS-ALPTNWPIREEASRKSQNQLSSTGKVDVYYYS---RGVRNDASLVPP 56
Query: 71 IRGNI-----PGVSFDFRSGKLNSLQKHRNKQRGNQ 101
IR P + + GK+ + KH N+++ Q
Sbjct: 57 IRQTASIFKQPVTIYKTQEGKVKDV-KHGNQEKPKQ 91
>gi|215741526|dbj|BAG98021.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 245
Score = 35.0 bits (79), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 30 PPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
PPGW R+ R +G DV+Y SP G+KLR+ E+
Sbjct: 149 PPGWERQIRIRGEG-GTKFADVYYTSPTGRKLRSLVEI 185
>gi|449452356|ref|XP_004143925.1| PREDICTED: uncharacterized protein LOC101223188 [Cucumis sativus]
gi|449495846|ref|XP_004159962.1| PREDICTED: uncharacterized protein LOC101226976 [Cucumis sativus]
Length = 853
Score = 35.0 bits (79), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 43/89 (48%), Gaps = 8/89 (8%)
Query: 22 KRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSP-CGKKLRTRSEVLQVIR-GNIPGVS 79
+ Y+ LPPGW +E + K + K D FY P G R++ EV + + G I +
Sbjct: 157 EHYKDEDLPPGWIKEIKIKEKADGIRK-DPFYIDPKSGYVFRSKKEVFRYLETGEISRHA 215
Query: 80 FDFRSG-----KLNSLQKHRNKQRGNQFE 103
F + G +L S +K R+ RG + E
Sbjct: 216 FKPKEGGDEDQELISDKKSRSTVRGQKLE 244
>gi|125564222|gb|EAZ09602.1| hypothetical protein OsI_31886 [Oryza sativa Indica Group]
Length = 383
Score = 35.0 bits (79), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 30 PPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEV 67
PPGW R+ R +G DV+Y SP G+KLR+ E+
Sbjct: 217 PPGWERQIRIRGEG-GTKFADVYYTSPTGRKLRSLVEI 253
>gi|147788831|emb|CAN77824.1| hypothetical protein VITISV_015457 [Vitis vinifera]
Length = 200
Score = 35.0 bits (79), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
P+ P G+ R+ V R K+D +Y +P GKK+R SE+ + N
Sbjct: 108 PKTPKGFQRDLVLRK---DFSKMDAYYITPTGKKVRALSEIAAYLSSN 152
>gi|296086678|emb|CBI32313.3| unnamed protein product [Vitis vinifera]
Length = 176
Score = 34.7 bits (78), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
P+ P G+ R+ V R K+D +Y +P GKK+R SE+ + N
Sbjct: 84 PKTPKGFQRDLVLRK---DFSKMDAYYITPTGKKVRALSEIAAYLSSN 128
>gi|194744743|ref|XP_001954852.1| GF18477 [Drosophila ananassae]
gi|190627889|gb|EDV43413.1| GF18477 [Drosophila ananassae]
Length = 332
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 14/59 (23%)
Query: 20 TKKRYECPQLPPGWYREE--------------VTRNKGLSVGKVDVFYYSPCGKKLRTR 64
T +R LP GW R+E T + + KVDVFYYSP GK++ ++
Sbjct: 8 TIERKRVDVLPKGWQRDEGRKSASSANSNASITTNSSSNNNNKVDVFYYSPTGKRVESK 66
>gi|148232373|ref|NP_001082767.1| bromodomain adjacent to zinc finger domain protein 2A [Xenopus
laevis]
gi|34391523|gb|AAN61105.1| putative chromatin remodelling factor BAZ2A [Xenopus laevis]
Length = 1698
Score = 34.7 bits (78), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 26 CPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
C L GW R EV KG + + +YY+PCGK+++ EV++ + N
Sbjct: 425 CFPLQHGW-RREVRIKKGSHRWQGETWYYAPCGKRMKQFPEVIKYLSKN 472
>gi|431914028|gb|ELK15290.1| Bromodomain adjacent to zinc finger domain protein 2A [Pteropus
alecto]
Length = 2523
Score = 34.7 bits (78), Expect = 6.6, Method: Composition-based stats.
Identities = 20/62 (32%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
Query: 14 LLKMLPTKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRG 73
L + + T + P L GW R EV KG + + +YY PCGK+++ EV++ +
Sbjct: 1167 LRRRIATAEEVRLP-LQHGW-RREVRIKKGSHRWQGETWYYGPCGKRMKQFPEVIKYLSR 1224
Query: 74 NI 75
N+
Sbjct: 1225 NV 1226
>gi|357159152|ref|XP_003578356.1| PREDICTED: methyl-CpG-binding domain-containing protein 2-like
[Brachypodium distachyon]
Length = 316
Score = 34.7 bits (78), Expect = 6.8, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 30 PPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
P GW R+ R +G DV+Y SP G+KLR++ EV + ++ N
Sbjct: 151 PNGWERQIRIRGEG-GTKFADVYYTSPSGRKLRSQVEVDKYLKEN 194
>gi|297263977|ref|XP_001116090.2| PREDICTED: methyl-CpG-binding domain protein 4-like, partial
[Macaca mulatta]
Length = 544
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 25 ECPQ-LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVS 79
EC + +P GW R R G + G+ DV++ SP G K R++S + + N +
Sbjct: 46 ECHKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRSKSSLANYLHKNGETCLKPED 105
Query: 80 FDF 82
FDF
Sbjct: 106 FDF 108
>gi|225436873|ref|XP_002273070.1| PREDICTED: methyl-CpG-binding domain-containing protein 4-like
isoform 1 [Vitis vinifera]
Length = 179
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Query: 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
P+ P G+ R+ V R K+D +Y +P GKK+R SE+ + N
Sbjct: 87 PKTPKGFQRDLVLRK---DFSKMDAYYITPTGKKVRALSEIAAYLSSN 131
>gi|257096238|sp|B7ZS37.1|BAZ2A_XENLA RecName: Full=Bromodomain adjacent to zinc finger domain protein
2A; AltName: Full=Transcription termination factor
I-interacting protein 5; Short=TTF-I-interacting protein
5; Short=Tip5
gi|213623908|gb|AAI70384.1| Chromatin remodelling factor BAZ2A-like [Xenopus laevis]
gi|213626915|gb|AAI70386.1| Chromatin remodelling factor BAZ2A-like [Xenopus laevis]
Length = 1698
Score = 34.7 bits (78), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 26 CPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
C L GW R EV KG + + +YY+PCGK+++ EV++ + N
Sbjct: 425 CFPLQHGW-RREVRIKKGSHRWQGETWYYAPCGKRMKQFPEVIKYLSKN 472
>gi|332231793|ref|XP_003265079.1| PREDICTED: methyl-CpG-binding domain protein 4 isoform 1 [Nomascus
leucogenys]
Length = 572
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 25 ECPQ-LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVS 79
EC + +P GW R R G + G+ DV++ SP G K R++S + + N +
Sbjct: 81 ECHKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRSKSSLANYLHKNGETSLKPED 140
Query: 80 FDF 82
FDF
Sbjct: 141 FDF 143
>gi|327264487|ref|XP_003217045.1| PREDICTED: bromodomain adjacent to zinc finger domain protein
2A-like [Anolis carolinensis]
Length = 1904
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 27/43 (62%), Gaps = 1/43 (2%)
Query: 32 GWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN 74
GW R EV KG + + + +YYSPCGK+++ EV++ + N
Sbjct: 571 GW-RREVRIKKGNNRWQGETWYYSPCGKRMKQFPEVIKFLSRN 612
>gi|390179055|ref|XP_003736789.1| GA20899, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859693|gb|EIM52862.1| GA20899, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 221
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 17/66 (25%)
Query: 21 KKRYECPQLPPGWYREEVTRNKGLSVG--------------KVDVFYYSPCGKKLRTRSE 66
+KR +C LP GW R+E ++ S KVDVFYYS + LRT
Sbjct: 11 RKRVDCSVLPKGWQRDEGRKSGSSSCATTTNSSSISSNNNNKVDVFYYS---RALRTDVS 67
Query: 67 VLQVIR 72
++ IR
Sbjct: 68 LVPPIR 73
>gi|332231795|ref|XP_003265080.1| PREDICTED: methyl-CpG-binding domain protein 4 isoform 2 [Nomascus
leucogenys]
Length = 578
Score = 34.7 bits (78), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 25 ECPQ-LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVS 79
EC + +P GW R R G + G+ DV++ SP G K R++S + + N +
Sbjct: 81 ECHKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRSKSSLANYLHKNGETSLKPED 140
Query: 80 FDF 82
FDF
Sbjct: 141 FDF 143
>gi|355786370|gb|EHH66553.1| hypothetical protein EGM_03568 [Macaca fascicularis]
Length = 578
Score = 34.7 bits (78), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 25 ECPQ-LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVS 79
EC + +P GW R R G + G+ DV++ SP G K R++S + + N +
Sbjct: 81 ECHKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRSKSSLANYLHKNGETCLKPED 140
Query: 80 FDF 82
FDF
Sbjct: 141 FDF 143
>gi|190360737|ref|NP_001121977.1| methyl-CpG-binding domain protein 3 [Bos taurus]
gi|125658152|gb|AAI33325.2| MBD3 protein [Bos taurus]
Length = 257
Score = 34.7 bits (78), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 30/44 (68%)
Query: 55 SPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
SP GKK R++ ++ + + G++ +FDFR+GK+ + ++ +QR
Sbjct: 5 SPSGKKFRSKPQLARYLGGSMDLSTFDFRTGKMLMSKVNKGRQR 48
>gi|380817674|gb|AFE80711.1| methyl-CpG-binding domain protein 4 [Macaca mulatta]
gi|380817676|gb|AFE80712.1| methyl-CpG-binding domain protein 4 [Macaca mulatta]
gi|383422567|gb|AFH34497.1| methyl-CpG-binding domain protein 4 [Macaca mulatta]
gi|383422569|gb|AFH34498.1| methyl-CpG-binding domain protein 4 [Macaca mulatta]
gi|384950154|gb|AFI38682.1| methyl-CpG-binding domain protein 4 [Macaca mulatta]
Length = 572
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 25 ECPQ-LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVS 79
EC + +P GW R R G + G+ DV++ SP G K R++S + + N +
Sbjct: 81 ECHKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRSKSSLANYLHKNGETCLKPED 140
Query: 80 FDF 82
FDF
Sbjct: 141 FDF 143
>gi|77735765|ref|NP_001029577.1| methyl-CpG-binding domain protein 4 [Bos taurus]
gi|73586836|gb|AAI03442.1| Methyl-CpG binding domain protein 4 [Bos taurus]
Length = 554
Score = 34.7 bits (78), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL----QVIRGNIPGVSFDF 82
+P GW R R G + GK DV + SP G+K R+R ++ Q ++ FDF
Sbjct: 81 VPCGWERVVKQRLSGKTAGKYDVHFISPQGQKFRSRVSLVNYLHQSGETSLKPEDFDF 138
>gi|67971738|dbj|BAE02211.1| unnamed protein product [Macaca fascicularis]
Length = 498
Score = 34.7 bits (78), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 25 ECPQ-LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVS 79
EC + +P GW R R G + G+ DV++ SP G K R++S + + N +
Sbjct: 81 ECHKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRSKSSLANYLHKNGETCLKPED 140
Query: 80 FDF 82
FDF
Sbjct: 141 FDF 143
>gi|355564527|gb|EHH21027.1| hypothetical protein EGK_04002 [Macaca mulatta]
Length = 578
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 25 ECPQ-LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVS 79
EC + +P GW R R G + G+ DV++ SP G K R++S + + N +
Sbjct: 81 ECHKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRSKSSLANYLHKNGETCLKPED 140
Query: 80 FDF 82
FDF
Sbjct: 141 FDF 143
>gi|296474714|tpg|DAA16829.1| TPA: methyl-CpG binding domain protein 4 [Bos taurus]
Length = 554
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVL----QVIRGNIPGVSFDF 82
+P GW R R G + GK DV + SP G+K R+R ++ Q ++ FDF
Sbjct: 81 VPCGWERVVKQRLSGKTAGKYDVHFISPQGQKFRSRVSLVNYLHQSGETSLKPEDFDF 138
>gi|281341365|gb|EFB16949.1| hypothetical protein PANDA_012756 [Ailuropoda melanoleuca]
Length = 255
Score = 34.7 bits (78), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 30/44 (68%)
Query: 55 SPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
SP GKK R++ ++ + + G++ +FDFR+GK+ + +++QR
Sbjct: 1 SPSGKKFRSKPQLARYLGGSMDLSTFDFRTGKMLLSKMSKSRQR 44
>gi|345315422|ref|XP_001506061.2| PREDICTED: methyl-CpG-binding domain protein 4-like, partial
[Ornithorhynchus anatinus]
Length = 417
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 25/44 (56%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIR 72
+P GW R R G + GK D++ SP G KLR++ ++ +R
Sbjct: 34 VPCGWERIVKQRMSGKTAGKYDIYLISPQGVKLRSKRALVNYLR 77
>gi|148667124|gb|EDK99540.1| methyl-CpG binding domain protein 4 [Mus musculus]
Length = 554
Score = 34.7 bits (78), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVSFDFR- 83
+P GW R R G + GK DV++ SP G K R++ + + N + FDF
Sbjct: 73 VPCGWERVVKQRLSGKTAGKFDVYFISPQGLKFRSKRSLANYLLKNGETFLKPEDFDFTV 132
Query: 84 --SGKLNSLQKHRN 95
G +N KH++
Sbjct: 133 LPKGSINPGYKHQS 146
>gi|187960081|ref|NP_034904.2| methyl-CpG-binding domain protein 4 [Mus musculus]
gi|19353797|gb|AAH24812.1| Methyl-CpG binding domain protein 4 [Mus musculus]
Length = 554
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVSFDFR- 83
+P GW R R G + GK DV++ SP G K R++ + + N + FDF
Sbjct: 73 VPCGWERVVKQRLSGKTAGKFDVYFISPQGLKFRSKRSLANYLLKNGETFLKPEDFDFTV 132
Query: 84 --SGKLNSLQKHRN 95
G +N KH++
Sbjct: 133 LPKGSINPGYKHQS 146
>gi|197098838|ref|NP_001127160.1| methyl-CpG-binding domain protein 4 [Pongo abelii]
gi|55725306|emb|CAH89518.1| hypothetical protein [Pongo abelii]
Length = 573
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 25 ECPQ-LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVS 79
EC + +P GW R R G + G+ DV++ SP G K R++S + + N +
Sbjct: 81 ECHKSVPCGWERVVKQRLFGKTAGRFDVYFISPEGLKFRSKSSLANYLHKNGETSLKPED 140
Query: 80 FDF 82
FDF
Sbjct: 141 FDF 143
>gi|301776346|ref|XP_002923595.1| PREDICTED: methyl-CpG-binding domain protein 3-like [Ailuropoda
melanoleuca]
Length = 294
Score = 34.7 bits (78), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 30/44 (68%)
Query: 55 SPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
SP GKK R++ ++ + + G++ +FDFR+GK+ + +++QR
Sbjct: 40 SPSGKKFRSKPQLARYLGGSMDLSTFDFRTGKMLLSKMSKSRQR 83
>gi|355755285|gb|EHH59032.1| Methyl-CpG-binding protein MBD3 [Macaca fascicularis]
Length = 296
Score = 34.7 bits (78), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 14/43 (32%), Positives = 30/43 (69%)
Query: 56 PCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
P GKK R++ ++ + + G++ +FDFR+GK+ + ++++QR
Sbjct: 43 PSGKKFRSKPQLARYLGGSMDLTTFDFRTGKMLMSKMNKSRQR 85
>gi|397518616|ref|XP_003829480.1| PREDICTED: methyl-CpG-binding domain protein 4 isoform 2 [Pan
paniscus]
Length = 580
Score = 34.7 bits (78), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 25 EC-PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVS 79
EC +P GW R R G + G+ DV++ SP G K R++S + + N +
Sbjct: 81 ECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRSKSSLANYLHKNGETSLKPED 140
Query: 80 FDF 82
FDF
Sbjct: 141 FDF 143
>gi|432101166|gb|ELK29450.1| Methyl-CpG-binding domain protein 3 [Myotis davidii]
Length = 313
Score = 34.7 bits (78), Expect = 8.2, Method: Composition-based stats.
Identities = 14/43 (32%), Positives = 30/43 (69%)
Query: 56 PCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQKHRNKQR 98
P GKK R++ ++ + + G++ +FDFR+GK+ + ++++QR
Sbjct: 61 PSGKKFRSKPQLARYLGGSMDLGAFDFRTGKMLMSKMNKSRQR 103
>gi|332231797|ref|XP_003265081.1| PREDICTED: methyl-CpG-binding domain protein 4 isoform 3 [Nomascus
leucogenys]
Length = 538
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Query: 25 ECPQ-LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVS 79
EC + +P GW R R G + G+ DV++ SP G K R++S + + N +
Sbjct: 81 ECHKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRSKSSLANYLHKNGETSLKPED 140
Query: 80 FDF 82
FDF
Sbjct: 141 FDF 143
>gi|4505121|ref|NP_003916.1| methyl-CpG-binding domain protein 4 isoform 1 [Homo sapiens]
gi|50400819|sp|O95243.1|MBD4_HUMAN RecName: Full=Methyl-CpG-binding domain protein 4; AltName:
Full=Methyl-CpG-binding endonuclease 1; AltName:
Full=Methyl-CpG-binding protein MBD4; AltName:
Full=Mismatch-specific DNA N-glycosylase
gi|4539759|gb|AAD22195.1|AF114784_1 methyl-CpG binding endonuclease [Homo sapiens]
gi|19852107|gb|AAM00008.1|AF494057_1 methyl-CpG binding domain protein 4 [Homo sapiens]
gi|3800809|gb|AAC68879.1| methyl-CpG binding protein MBD4 [Homo sapiens]
gi|5739194|gb|AAD50374.1| methyl-CpG binding protein 4 [Homo sapiens]
gi|119599659|gb|EAW79253.1| methyl-CpG binding domain protein 4, isoform CRA_c [Homo sapiens]
gi|119599660|gb|EAW79254.1| methyl-CpG binding domain protein 4, isoform CRA_c [Homo sapiens]
Length = 580
Score = 34.7 bits (78), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 25 EC-PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVS 79
EC +P GW R R G + G+ DV++ SP G K R++S + + N +
Sbjct: 81 ECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRSKSSLANYLHKNGETSLKPED 140
Query: 80 FDF 82
FDF
Sbjct: 141 FDF 143
>gi|114589101|ref|XP_001144095.1| PREDICTED: methyl-CpG-binding domain protein 4 isoform 7 [Pan
troglodytes]
gi|410211778|gb|JAA03108.1| methyl-CpG binding domain protein 4 [Pan troglodytes]
gi|410262686|gb|JAA19309.1| methyl-CpG binding domain protein 4 [Pan troglodytes]
gi|410298898|gb|JAA28049.1| methyl-CpG binding domain protein 4 [Pan troglodytes]
gi|410334153|gb|JAA36023.1| methyl-CpG binding domain protein 4 [Pan troglodytes]
Length = 580
Score = 34.3 bits (77), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 25 EC-PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVS 79
EC +P GW R R G + G+ DV++ SP G K R++S + + N +
Sbjct: 81 ECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRSKSSLANYLHKNGETSLKPED 140
Query: 80 FDF 82
FDF
Sbjct: 141 FDF 143
>gi|194381152|dbj|BAG64144.1| unnamed protein product [Homo sapiens]
Length = 572
Score = 34.3 bits (77), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 25 EC-PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVS 79
EC +P GW R R G + G+ DV++ SP G K R++S + + N +
Sbjct: 81 ECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRSKSSLANYLHKNGETSLKPED 140
Query: 80 FDF 82
FDF
Sbjct: 141 FDF 143
>gi|397518614|ref|XP_003829479.1| PREDICTED: methyl-CpG-binding domain protein 4 isoform 1 [Pan
paniscus]
Length = 574
Score = 34.3 bits (77), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 25 EC-PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVS 79
EC +P GW R R G + G+ DV++ SP G K R++S + + N +
Sbjct: 81 ECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRSKSSLANYLHKNGETSLKPED 140
Query: 80 FDF 82
FDF
Sbjct: 141 FDF 143
>gi|426342067|ref|XP_004036337.1| PREDICTED: methyl-CpG-binding domain protein 4 isoform 2 [Gorilla
gorilla gorilla]
Length = 580
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 25 EC-PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVS 79
EC +P GW R R G + G+ DV++ SP G K R++S + + N +
Sbjct: 81 ECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRSKSSLANYLHKNGETSLKPED 140
Query: 80 FDF 82
FDF
Sbjct: 141 FDF 143
>gi|442796450|ref|NP_001263199.1| methyl-CpG-binding domain protein 4 isoform 2 [Homo sapiens]
gi|15079922|gb|AAH11752.1| MBD4 protein [Homo sapiens]
gi|47496557|emb|CAG29301.1| MBD4 [Homo sapiens]
gi|119599657|gb|EAW79251.1| methyl-CpG binding domain protein 4, isoform CRA_a [Homo sapiens]
gi|119599661|gb|EAW79255.1| methyl-CpG binding domain protein 4, isoform CRA_a [Homo sapiens]
gi|325463337|gb|ADZ15439.1| methyl-CpG binding domain protein 4 [synthetic construct]
Length = 574
Score = 34.3 bits (77), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 25 EC-PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVS 79
EC +P GW R R G + G+ DV++ SP G K R++S + + N +
Sbjct: 81 ECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRSKSSLANYLHKNGETSLKPED 140
Query: 80 FDF 82
FDF
Sbjct: 141 FDF 143
>gi|432853525|ref|XP_004067750.1| PREDICTED: methyl-CpG-binding domain protein 3-like isoform 4
[Oryzias latipes]
Length = 265
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 32 GWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSLQ 91
G ++E R G++ + P GKK R++ ++ + + + SFDFR+GK+ +
Sbjct: 7 GEEQDEEQRQDRGEAGRL--YSLCPSGKKFRSKPQLARYLGNQMDLSSFDFRTGKMLMSK 64
Query: 92 KHRNKQR 98
++N+QR
Sbjct: 65 LNKNRQR 71
>gi|426342065|ref|XP_004036336.1| PREDICTED: methyl-CpG-binding domain protein 4 isoform 1 [Gorilla
gorilla gorilla]
Length = 574
Score = 34.3 bits (77), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 25 EC-PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVS 79
EC +P GW R R G + G+ DV++ SP G K R++S + + N +
Sbjct: 81 ECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRSKSSLANYLHKNGETSLKPED 140
Query: 80 FDF 82
FDF
Sbjct: 141 FDF 143
>gi|442796452|ref|NP_001263200.1| methyl-CpG-binding domain protein 4 isoform 3 [Homo sapiens]
Length = 572
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 25 EC-PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVS 79
EC +P GW R R G + G+ DV++ SP G K R++S + + N +
Sbjct: 81 ECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRSKSSLANYLHKNGETSLKPED 140
Query: 80 FDF 82
FDF
Sbjct: 141 FDF 143
>gi|332817878|ref|XP_003310052.1| PREDICTED: methyl-CpG-binding domain protein 4 [Pan troglodytes]
gi|410334151|gb|JAA36022.1| methyl-CpG binding domain protein 4 [Pan troglodytes]
Length = 574
Score = 34.3 bits (77), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 25 EC-PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVS 79
EC +P GW R R G + G+ DV++ SP G K R++S + + N +
Sbjct: 81 ECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRSKSSLANYLHKNGETSLKPED 140
Query: 80 FDF 82
FDF
Sbjct: 141 FDF 143
>gi|343962517|dbj|BAK62846.1| methyl-CpG-binding domain protein 4 [Pan troglodytes]
Length = 573
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 25 EC-PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVS 79
EC +P GW R R G + G+ DV++ SP G K R++S + + N +
Sbjct: 81 ECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRSKSSLANYLHKNGETSLKPED 140
Query: 80 FDF 82
FDF
Sbjct: 141 FDF 143
>gi|297746071|emb|CBI16127.3| unnamed protein product [Vitis vinifera]
Length = 135
Score = 34.3 bits (77), Expect = 9.1, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSP-CGKKLRTRSEV 67
LPPGW E R+ G S G D ++ P G++ R++ EV
Sbjct: 10 LPPGWIVEGRVRSSGASAGSRDKYFIEPITGRRFRSKKEV 49
>gi|47230592|emb|CAF99785.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1679
Score = 34.3 bits (77), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
Query: 50 DVFYYSPCGKKLRTRSEVLQVI-RGNIPGVSFD 81
+V YY+PCGKKLR +V++ + R I G++ D
Sbjct: 200 EVAYYAPCGKKLRQYPDVMKYLSRNGISGITRD 232
>gi|397518618|ref|XP_003829481.1| PREDICTED: methyl-CpG-binding domain protein 4 isoform 3 [Pan
paniscus]
Length = 540
Score = 34.3 bits (77), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 25 EC-PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVS 79
EC +P GW R R G + G+ DV++ SP G K R++S + + N +
Sbjct: 81 ECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRSKSSLANYLHKNGETSLKPED 140
Query: 80 FDF 82
FDF
Sbjct: 141 FDF 143
>gi|442796454|ref|NP_001263201.1| methyl-CpG-binding domain protein 4 isoform 4 [Homo sapiens]
gi|33150919|gb|AAP97338.1| methyl-CpG binding domain protein 4 variant [Homo sapiens]
gi|119599658|gb|EAW79252.1| methyl-CpG binding domain protein 4, isoform CRA_b [Homo sapiens]
Length = 540
Score = 34.3 bits (77), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 25 EC-PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVS 79
EC +P GW R R G + G+ DV++ SP G K R++S + + N +
Sbjct: 81 ECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRSKSSLANYLHKNGETSLKPED 140
Query: 80 FDF 82
FDF
Sbjct: 141 FDF 143
>gi|351703610|gb|EHB06529.1| Bromodomain adjacent to zinc finger domain protein 2A
[Heterocephalus glaber]
Length = 1897
Score = 34.3 bits (77), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 32 GWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNI 75
GW R EV KG + + +YY PCGK+++ EV++ + N+
Sbjct: 542 GW-RREVRIKKGSHRWQGETWYYGPCGKRMKQFPEVIKYLSRNV 584
>gi|328927020|ref|NP_001180159.2| bromodomain adjacent to zinc finger domain protein 2A [Bos taurus]
Length = 1898
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 32 GWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNI 75
GW R EV KG + + +YY PCGK+++ EV++ + N+
Sbjct: 551 GW-RREVRIKKGSHRWQGETWYYGPCGKRMKQFPEVIKYLSRNV 593
>gi|348580918|ref|XP_003476225.1| PREDICTED: LOW QUALITY PROTEIN: bromodomain adjacent to zinc finger
domain protein 2A-like [Cavia porcellus]
Length = 1886
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 32 GWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNI 75
GW R EV KG + + +YY PCGK+++ EV++ + N+
Sbjct: 542 GW-RREVRIKKGSHRWQGETWYYGPCGKRMKQFPEVIKYLSRNV 584
>gi|296487472|tpg|DAA29585.1| TPA: bromodomain adjacent to zinc finger domain, 2A [Bos taurus]
Length = 2013
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 32 GWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNI 75
GW R EV KG + + +YY PCGK+++ EV++ + N+
Sbjct: 666 GW-RREVRIKKGSHRWQGETWYYGPCGKRMKQFPEVIKYLSRNV 708
>gi|74145383|dbj|BAE36144.1| unnamed protein product [Mus musculus]
Length = 365
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 35/74 (47%), Gaps = 7/74 (9%)
Query: 29 LPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVSFDFR- 83
+P GW R R G + GK DV++ SP G K R++ + + N + FDF
Sbjct: 52 VPCGWERVVKQRLSGKTAGKFDVYFISPQGLKFRSKRSLANYLLKNGETFLKPEDFDFTV 111
Query: 84 --SGKLNSLQKHRN 95
G +N KH++
Sbjct: 112 LPKGSINPGYKHQS 125
>gi|114589107|ref|XP_001143803.1| PREDICTED: methyl-CpG-binding domain protein 4 isoform 3 [Pan
troglodytes]
Length = 540
Score = 34.3 bits (77), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 31/63 (49%), Gaps = 5/63 (7%)
Query: 25 EC-PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGN----IPGVS 79
EC +P GW R R G + G+ DV++ SP G K R++S + + N +
Sbjct: 81 ECRKSVPCGWERVVKQRLFGKTAGRFDVYFISPQGLKFRSKSSLANYLHKNGETSLKPED 140
Query: 80 FDF 82
FDF
Sbjct: 141 FDF 143
>gi|383415481|gb|AFH30954.1| bromodomain adjacent to zinc finger domain protein 2A [Macaca
mulatta]
Length = 1909
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 32 GWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNI 75
GW R EV KG + + +YY PCGK+++ EV++ + N+
Sbjct: 559 GW-RREVRIKKGSHRWQGETWYYGPCGKRMKQFPEVIKYLSRNV 601
>gi|350584143|ref|XP_001927787.4| PREDICTED: bromodomain adjacent to zinc finger domain protein 2A
[Sus scrofa]
Length = 1757
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 32 GWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNI 75
GW R EV KG + + +YY PCGK+++ EV++ + N+
Sbjct: 406 GW-RREVRIKKGSHRWQGETWYYGPCGKRMKQFPEVIKYLSRNV 448
>gi|26335911|dbj|BAC31656.1| unnamed protein product [Mus musculus]
Length = 181
Score = 34.3 bits (77), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 32 GWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNI 75
G +R EV KG + + +YY PCGK+++ EV++ + N+
Sbjct: 5 GRWRREVRIKKGSHRWQGETWYYGPCGKRMKQFPEVIKYLSRNV 48
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.137 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,622,185,131
Number of Sequences: 23463169
Number of extensions: 58170941
Number of successful extensions: 107812
Number of sequences better than 100.0: 715
Number of HSP's better than 100.0 without gapping: 526
Number of HSP's successfully gapped in prelim test: 189
Number of HSP's that attempted gapping in prelim test: 107236
Number of HSP's gapped (non-prelim): 722
length of query: 104
length of database: 8,064,228,071
effective HSP length: 73
effective length of query: 31
effective length of database: 6,351,416,734
effective search space: 196893918754
effective search space used: 196893918754
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 69 (31.2 bits)