Query psy3970
Match_columns 104
No_of_seqs 104 out of 245
Neff 4.5
Searched_HMMs 29240
Date Fri Aug 16 22:00:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3970.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3970hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1d9n_A Methyl-CPG-binding prot 100.0 1.9E-32 6.7E-37 181.3 6.1 72 19-90 1-72 (75)
2 2ky8_A Methyl-CPG-binding doma 100.0 1.3E-31 4.4E-36 175.9 7.8 70 19-88 3-72 (72)
3 3c2i_A Methyl-CPG-binding prot 100.0 2.1E-29 7.1E-34 174.0 8.7 78 16-93 11-92 (97)
4 1ub1_A MECP2, attachment regio 99.9 1.5E-27 5E-32 172.6 8.2 77 16-92 25-106 (133)
5 3vxv_A Methyl-CPG-binding doma 99.9 4E-27 1.4E-31 153.5 7.1 58 28-85 5-66 (69)
6 1wr3_A Ubiquitin-protein ligas 91.0 0.17 6E-06 27.5 2.6 23 27-57 3-25 (36)
7 2kpz_A E3 ubiquitin-protein li 90.9 0.22 7.5E-06 29.2 3.1 29 21-57 5-33 (49)
8 2law_A Yorkie homolog; YAP, SM 90.8 0.23 7.9E-06 27.6 3.0 23 27-57 5-27 (38)
9 2kyk_A E3 ubiquitin-protein li 89.1 0.52 1.8E-05 26.1 3.6 23 27-57 5-27 (39)
10 2ho2_A Fe65 protein, amyloid b 89.1 0.25 8.5E-06 28.0 2.2 21 27-56 2-22 (38)
11 2ysg_A Syntaxin-binding protei 88.9 0.36 1.2E-05 27.0 2.9 23 27-57 6-28 (40)
12 2ysf_A E3 ubiquitin-protein li 88.0 0.4 1.4E-05 26.9 2.6 23 27-57 6-28 (40)
13 2jv4_A Peptidyl-prolyl CIS/tra 87.4 0.69 2.4E-05 27.8 3.6 24 26-56 5-28 (54)
14 1wr4_A Ubiquitin-protein ligas 87.2 0.63 2.1E-05 24.9 3.1 23 27-57 3-25 (36)
15 1e0m_A Wwprototype; SH3 protot 87.0 0.48 1.7E-05 25.6 2.5 21 28-56 3-23 (37)
16 2e45_A Fe65 protein, amyloid b 86.6 0.69 2.4E-05 28.6 3.3 13 25-37 16-28 (55)
17 1i5h_W Rnedd4, ubiquitin ligas 86.5 0.74 2.5E-05 27.1 3.3 23 27-57 10-32 (50)
18 2djy_A SMAD ubiquitination reg 86.5 0.86 2.9E-05 25.9 3.5 24 26-57 5-28 (42)
19 2ysh_A GAS-7, growth-arrest-sp 85.9 0.78 2.7E-05 25.4 3.1 23 26-56 5-27 (40)
20 1wr7_A NEDD4-2; all-beta, liga 85.8 0.94 3.2E-05 25.4 3.4 24 26-57 6-29 (41)
21 1ymz_A CC45; artificial protei 85.7 0.61 2.1E-05 26.3 2.6 24 26-57 6-29 (43)
22 2dmv_A Itchy homolog E3 ubiqui 84.3 0.76 2.6E-05 26.0 2.6 24 26-57 5-28 (43)
23 2l4j_A YES-associated protein 84.2 1.1 3.8E-05 25.9 3.3 23 27-57 10-32 (46)
24 1wmv_A WWOX, WW domain contain 82.7 1.4 5E-05 26.3 3.5 24 26-57 9-32 (54)
25 2ez5_W Dnedd4, E3 ubiquitin-pr 82.5 1.6 5.3E-05 25.2 3.5 23 27-57 9-31 (46)
26 2dwv_A Salvador homolog 1 prot 82.3 2.3 7.9E-05 24.9 4.2 29 20-57 6-34 (49)
27 2ysb_A Salvador homolog 1 prot 82.2 1.4 4.7E-05 25.9 3.2 24 26-57 9-32 (49)
28 2yse_A Membrane-associated gua 82.1 1.3 4.4E-05 27.3 3.2 25 27-59 12-36 (60)
29 2zaj_A Membrane-associated gua 80.9 2.7 9.1E-05 24.7 4.1 24 26-57 11-34 (49)
30 2jmf_A E3 ubiquitin-protein li 80.4 1.8 6.2E-05 25.8 3.3 24 26-57 16-39 (53)
31 1yw5_A Peptidyl prolyl CIS/tra 79.5 2.2 7.6E-05 30.3 4.1 40 28-74 7-53 (177)
32 2ysd_A Membrane-associated gua 72.7 4.2 0.00014 24.5 3.5 23 27-57 13-35 (57)
33 2kxq_A E3 ubiquitin-protein li 70.0 6.1 0.00021 25.3 4.0 22 28-57 9-30 (90)
34 2ysc_A Amyloid beta A4 precurs 64.3 3.9 0.00013 22.9 1.9 10 27-36 7-16 (39)
35 1tk7_A CG4244-PB; WW domain, n 62.6 7.9 0.00027 24.6 3.4 21 28-56 12-32 (88)
36 2l3a_A Uncharacterized protein 60.9 8.2 0.00028 25.5 3.3 44 26-69 18-66 (82)
37 3pm7_A Uncharacterized protein 60.0 12 0.00041 24.6 3.9 36 26-61 16-51 (80)
38 3l4h_A E3 ubiquitin-protein li 57.6 7.5 0.00026 26.7 2.7 24 28-59 72-95 (109)
39 4g06_A Uncharacterized protein 54.9 18 0.00063 23.6 4.2 37 25-61 22-58 (79)
40 3tc5_A Peptidyl-prolyl CIS-tra 46.8 13 0.00045 26.2 2.7 23 27-56 8-30 (166)
41 1fme_A FSD-EY peptide; beta-BE 40.4 19 0.00064 19.1 2.0 17 57-73 8-24 (28)
42 1fiw_L Beta-acrosin light chai 39.6 5.9 0.0002 21.0 -0.1 11 55-65 7-17 (26)
43 1fiz_L Beta-acrosin light chai 39.5 6 0.0002 21.0 -0.1 11 55-65 8-18 (26)
44 2eln_A Zinc finger protein 406 39.4 27 0.00092 18.5 2.7 24 49-72 6-32 (38)
45 1eg3_A Dystrophin; EF-hand lik 38.6 15 0.00051 28.1 2.0 22 28-57 11-32 (261)
46 3lyd_A Uncharacterized protein 38.2 10 0.00035 27.4 0.9 30 4-36 2-31 (161)
47 1bhi_A CRE-BP1, ATF-2; CRE bin 37.7 36 0.0012 16.3 2.9 20 53-72 7-29 (38)
48 1znf_A 31ST zinc finger from X 37.3 22 0.00076 15.5 1.9 17 56-72 6-22 (27)
49 1zr9_A Zinc finger protein 593 34.2 19 0.00065 24.9 1.8 23 51-73 50-72 (124)
50 1jmq_A YAP65, 65 kDa YES-assoc 33.6 13 0.00043 20.9 0.7 8 28-35 8-15 (46)
51 1va1_A Transcription factor SP 33.2 45 0.0015 16.1 2.9 16 57-72 16-31 (37)
52 2jx8_A Hpcif1, phosphorylated 33.1 12 0.0004 22.1 0.5 23 27-56 9-31 (52)
53 2l5f_A PRE-mRNA-processing fac 31.9 25 0.00085 22.4 2.0 24 28-59 11-35 (92)
54 2ltd_A Uncharacterized protein 37.8 10 0.00034 25.0 0.0 44 18-61 8-51 (80)
55 2ab3_A ZNF29; zinc finger prot 31.5 38 0.0013 14.7 3.1 17 56-72 9-25 (29)
56 2kvh_A Zinc finger and BTB dom 30.5 41 0.0014 14.7 2.5 18 55-72 7-24 (27)
57 1sp2_A SP1F2; zinc finger, tra 30.4 32 0.0011 15.7 1.8 18 56-73 9-26 (31)
58 1e0n_A Hypothetical protein; Y 29.9 51 0.0018 16.8 2.7 18 31-57 1-18 (27)
59 2kvf_A Zinc finger and BTB dom 29.4 43 0.0015 14.6 2.6 19 54-72 6-24 (28)
60 1srk_A Zinc finger protein ZFP 28.9 51 0.0017 15.3 2.7 22 52-73 8-29 (35)
61 1ard_A Yeast transcription fac 28.8 37 0.0013 14.8 1.9 18 55-72 6-23 (29)
62 2elx_A Zinc finger protein 406 27.9 52 0.0018 15.1 2.6 22 52-73 8-29 (35)
63 3hx8_A MLR2180 protein, putati 27.8 61 0.0021 19.6 3.3 25 49-73 33-57 (129)
64 3bam_A R. bamhi, protein (rest 27.6 33 0.0011 26.0 2.3 31 31-61 72-108 (213)
65 1o6w_A PRP40, PRE-mRNA process 27.0 27 0.00093 21.1 1.5 22 28-57 40-61 (75)
66 1zfd_A SWI5; DNA binding motif 25.0 38 0.0013 15.5 1.5 18 56-73 10-27 (32)
67 3tvt_B PINS, partner of inscut 24.9 36 0.0012 20.2 1.6 26 35-62 18-43 (50)
68 1rik_A E6APC1 peptide; E6-bind 24.4 55 0.0019 14.2 2.1 18 55-72 6-23 (29)
69 2els_A Zinc finger protein 406 24.4 65 0.0022 15.1 2.9 21 52-72 10-30 (36)
70 2ysi_A Transcription elongatio 23.8 98 0.0033 16.9 3.5 22 27-56 6-27 (40)
71 2elr_A Zinc finger protein 406 23.8 36 0.0012 15.9 1.4 20 53-72 11-30 (36)
72 1ohp_A Steroid delta-isomerase 23.6 82 0.0028 18.5 3.3 26 48-73 31-57 (125)
73 3mso_A Steroid delta-isomerase 22.7 78 0.0027 20.9 3.3 26 48-73 35-61 (143)
74 2elt_A Zinc finger protein 406 22.3 72 0.0025 14.8 2.5 21 52-72 10-30 (36)
75 3dxo_A Uncharacterized snoal-l 22.1 73 0.0025 20.1 2.9 35 48-83 33-68 (121)
76 1klr_A Zinc finger Y-chromosom 21.3 41 0.0014 14.6 1.2 18 55-72 6-23 (30)
77 1oh0_A Steroid delta-isomerase 21.2 86 0.0029 19.0 3.0 26 48-73 33-59 (131)
78 3odh_A Okrai endonuclease; alp 20.8 1E+02 0.0036 23.0 3.8 30 31-61 66-96 (194)
79 2emg_A Zinc finger protein 484 20.7 91 0.0031 15.5 2.7 21 54-74 15-35 (46)
80 2en7_A Zinc finger protein 268 20.6 89 0.003 15.2 2.6 20 55-74 16-35 (44)
81 2enf_A Zinc finger protein 347 20.1 96 0.0033 15.4 2.7 20 55-74 16-35 (46)
82 2bng_A MB2760; epoxide hydrola 20.0 1.3E+02 0.0045 19.1 3.9 26 49-74 42-67 (149)
No 1
>1d9n_A Methyl-CPG-binding protein MBD1; PCM1, methylation, DNA binding domain, gene regulation; NMR {Homo sapiens} SCOP: d.10.1.3 PDB: 1ig4_A*
Probab=99.97 E-value=1.9e-32 Score=181.31 Aligned_cols=72 Identities=33% Similarity=0.672 Sum_probs=69.3
Q ss_pred cccccccCCCCCCCcEEEEEEccCCCCCCceeEEEEcCCCceeccHHHHHHHHhCCCCCcceeeecCcccch
Q psy3970 19 PTKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLNSL 90 (104)
Q Consensus 19 ~~~~~~~~p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~GkkfRSk~eV~ryL~~~l~~e~FdF~~~k~~~~ 90 (104)
|++.|++||.||+||+||+++|++|+++++.|||||||+|++|||++||++||+.++++++|||++|+++..
T Consensus 1 ~~~~~~~~p~LP~GW~Re~~~R~~g~s~gk~DvyY~sP~Gkk~RS~~ev~ryL~~~~~~~~FdF~~gk~~~~ 72 (75)
T 1d9n_A 1 MAEDWLDCPALGPGWKRREVFRKSGATCGRSDTYYQSPTGDRIRSKVELTRYLGPACDLTLFDFKQGILCYP 72 (75)
T ss_dssp CCSCCEECTTTCSSCEEEECSSSSSCTTCCCCEEEECSSSCEECSTHHHHHHHCTTCCCTTCCTTTCCCCCS
T ss_pred CCcccccCCCCCCCCEEEEEEecCCCCCCceEEEEECCCCCeeecHHHHHHHhccCCCccccCCCCCCccCC
Confidence 578999999999999999999999999999999999999999999999999999999999999999999754
No 2
>2ky8_A Methyl-CPG-binding domain protein 2; DNA binding domain, transcription-DNA complex; HET: DNA 5CM TED; NMR {Gallus gallus}
Probab=99.97 E-value=1.3e-31 Score=175.86 Aligned_cols=70 Identities=46% Similarity=0.949 Sum_probs=66.6
Q ss_pred cccccccCCCCCCCcEEEEEEccCCCCCCceeEEEEcCCCceeccHHHHHHHHhCCCCCcceeeecCccc
Q psy3970 19 PTKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRGNIPGVSFDFRSGKLN 88 (104)
Q Consensus 19 ~~~~~~~~p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~GkkfRSk~eV~ryL~~~l~~e~FdF~~~k~~ 88 (104)
-.+.+++||+||+||+||+++|++|.|+++.||||++|+|++|||+.||++||+.++++++|||++|+++
T Consensus 3 ~~~~~~~~p~Lp~GW~R~~~~R~~g~s~~k~DvyY~sP~Gkr~RS~~ev~~YL~~~l~~~~FdF~~~~~~ 72 (72)
T 2ky8_A 3 DKQGRTDCPALPPGWKKEEVIRKSGLSAGKSDVYYFSPSGKKFRSKPQLARYLGNAVDLSCFDFRTGKMM 72 (72)
T ss_dssp CCCSEEECSSSCTTCEEEEEECCSSTTTTCEEEEEECTTCCEEESHHHHHHHHTTSSCCTTCBTTTTBC-
T ss_pred CccccccCCCCCCCCEEEEEEecCCCCCCceEEEEECCCCCEeEcHHHHHHHHhcCCChhhcCCCCCCcC
Confidence 3578899999999999999999999999999999999999999999999999999999999999999985
No 3
>3c2i_A Methyl-CPG-binding protein 2; water mediated recognition; HET: DNA 5CM; 2.50A {Homo sapiens} PDB: 1qk9_A
Probab=99.96 E-value=2.1e-29 Score=174.04 Aligned_cols=78 Identities=31% Similarity=0.546 Sum_probs=65.4
Q ss_pred ccccccccccCCCCCCCcEEEEEEccCCCCCCceeEEEEcCCCceeccHHHHHHHHhC----CCCCcceeeecCcccchh
Q psy3970 16 KMLPTKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRG----NIPGVSFDFRSGKLNSLQ 91 (104)
Q Consensus 16 ~~~~~~~~~~~p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~GkkfRSk~eV~ryL~~----~l~~e~FdF~~~k~~~~~ 91 (104)
-++++.+.++||+||+||+||+++|++|+++|++|||||||+|++|||+.||++||+. ++++++|||+++++..+.
T Consensus 11 ~i~~~~~~~~~~~lP~GW~re~~~R~~G~s~gk~DvYY~sP~GkkfRSk~ev~ryL~~~g~~~~~~~~FdF~~~~~~~~~ 90 (97)
T 3c2i_A 11 IIRDRGPMYDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELIMYFEKVGDTSLDPNDFDFTVTGRGSPS 90 (97)
T ss_dssp ----CCCCCCCTTSCTTCEEEEEECCSSTTTTCEEEEEECTTSCEECSHHHHHHHHHHHTCCSSCTTTCCCCSSCC----
T ss_pred eEecCCcccCCCCCCCCCEEEEEEecCCCCCCcceEEEECCCCCEEECHHHHHHHHHHCCCCCCCHhhccccCCCcCccc
Confidence 4678999999999999999999999999999999999999999999999999999963 489999999999987665
Q ss_pred hh
Q psy3970 92 KH 93 (104)
Q Consensus 92 ~~ 93 (104)
.+
T Consensus 91 ~~ 92 (97)
T 3c2i_A 91 RH 92 (97)
T ss_dssp --
T ss_pred cc
Confidence 43
No 4
>1ub1_A MECP2, attachment region binding protein; chicken methyl-CPG-binding protein 2 (cmecp2), MAR-binding protein (ARBP), spectroscopy; NMR {Gallus gallus} SCOP: d.10.1.3
Probab=99.94 E-value=1.5e-27 Score=172.63 Aligned_cols=77 Identities=30% Similarity=0.582 Sum_probs=68.7
Q ss_pred ccccccccccCCCCCCCcEEEEEEccCCCCCCceeEEEEcCCCceeccHHHHHHHHhC----CCCCcceeee-cCcccch
Q psy3970 16 KMLPTKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRG----NIPGVSFDFR-SGKLNSL 90 (104)
Q Consensus 16 ~~~~~~~~~~~p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~GkkfRSk~eV~ryL~~----~l~~e~FdF~-~~k~~~~ 90 (104)
=++++.+.++||+||+||+||+++|++|+|++++|||||||+|++|||+.||++||+. ++++++|||+ .++...+
T Consensus 25 vi~~~~~~~~~~~LP~GWkRe~~~RksG~Sagk~DVYY~SP~GKkfRSk~Ev~ryL~~~~~~~~~~e~FdF~~~gk~~~s 104 (133)
T 1ub1_A 25 IIRDRGPMYDDPTLPEGWTRKLKQRKSGRSAGKYDVYLINPQGKAFRSKVELIAYFEKVGDTSLDPNDFDFTVTGRGSPS 104 (133)
T ss_dssp CCCTTSCSSCCCCBTTBCEEEEEECCCSSSCCSEEEEEECTTSCEESSHHHHHHHHTTSCCCSCCGGGCCCCCCCCSCSS
T ss_pred eeeccccccCCCCCCCCCEEEEEEecCCCCCCceeEEEECCCCCeeeCHHHHHHHHHHCCccCCCHhHCccccCCCCCCc
Confidence 3567788899999999999999999999999999999999999999999999999974 3899999999 4676655
Q ss_pred hh
Q psy3970 91 QK 92 (104)
Q Consensus 91 ~~ 92 (104)
.+
T Consensus 105 ~R 106 (133)
T 1ub1_A 105 RR 106 (133)
T ss_dssp CC
T ss_pred cc
Confidence 53
No 5
>3vxv_A Methyl-CPG-binding domain protein 4; methyl CPG binding domain, protein-DNA complex, versatIle BA recognition, hydrolase-DNA complex; HET: DNA 5CM; 2.00A {Mus musculus} PDB: 3vxx_A* 3vyb_A* 3vyq_A*
Probab=99.94 E-value=4e-27 Score=153.50 Aligned_cols=58 Identities=29% Similarity=0.525 Sum_probs=55.6
Q ss_pred CCCCCcEEEEEEccCCCCCCceeEEEEcCCCceeccHHHHHHHHhC----CCCCcceeeecC
Q psy3970 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLRTRSEVLQVIRG----NIPGVSFDFRSG 85 (104)
Q Consensus 28 ~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~GkkfRSk~eV~ryL~~----~l~~e~FdF~~~ 85 (104)
+||+||+|++++|++|+++++.||||+||+||||||++||++||+. .+++++|||+++
T Consensus 5 plp~GW~R~~~~R~~G~s~gk~DvyY~sP~Gkk~RSk~ev~~yL~~~~~~~l~~~~FdF~~p 66 (69)
T 3vxv_A 5 PVPCGWERVVKQRLSGKTAGKFDVYFISPQGLKFRSKRSLANYLLKNGETFLKPEDFNFTVL 66 (69)
T ss_dssp CSCTTCEEEEEECCSSTTTTCEEEEEECTTSCEECSHHHHHHHHHHHCCCCCCGGGSCCCCC
T ss_pred cCCCCCEEEEEEeccCCCCCcceEEEEcCCCCEeeCHHHHHHHHHhCCCCCCCHHHcceeCC
Confidence 7999999999999999999999999999999999999999999987 489999999976
No 6
>1wr3_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus}
Probab=90.97 E-value=0.17 Score=27.50 Aligned_cols=23 Identities=35% Similarity=0.716 Sum_probs=16.1
Q ss_pred CCCCCCcEEEEEEccCCCCCCceeEEEEcCC
Q psy3970 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPC 57 (104)
Q Consensus 27 p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~ 57 (104)
++||+||+...- . .+.+||++-.
T Consensus 3 ~~LP~GWe~~~d--~------~G~~Yy~n~~ 25 (36)
T 1wr3_A 3 PPLPPGWEEKVD--N------LGRTYYVNHN 25 (36)
T ss_dssp SCSCTTEEEEEC--S------SSCEEEEETT
T ss_pred CCCCCCCEEEEC--C------CCCEEEEECC
Confidence 579999976542 2 3568999763
No 7
>2kpz_A E3 ubiquitin-protein ligase NEDD4; WW domain, HTLV1, NEDD4, human modular domain, complex, HOST interaction, ligase; NMR {Homo sapiens} PDB: 2kq0_A 2laj_A*
Probab=90.88 E-value=0.22 Score=29.20 Aligned_cols=29 Identities=21% Similarity=0.320 Sum_probs=15.7
Q ss_pred cccccCCCCCCCcEEEEEEccCCCCCCceeEEEEcCC
Q psy3970 21 KKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPC 57 (104)
Q Consensus 21 ~~~~~~p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~ 57 (104)
.......+||+||+..+- . .+.+|||+-.
T Consensus 5 ~~~~~~~~LP~gWe~~~~--~------~G~~Yy~nh~ 33 (49)
T 2kpz_A 5 PSEIEQGFLPKGWEVRHA--P------NGRPFFIDHN 33 (49)
T ss_dssp -------CCCTTEEEEEC--T------TSCEEEEETT
T ss_pred cccccCCCCCCCcEEEEC--C------CCCEEEEECC
Confidence 344455689999976543 2 3468999764
No 8
>2law_A Yorkie homolog; YAP, SMAD1, CDK, signal transduction, signaling protein-TRAN complex; NMR {Homo sapiens}
Probab=90.80 E-value=0.23 Score=27.59 Aligned_cols=23 Identities=22% Similarity=0.575 Sum_probs=16.5
Q ss_pred CCCCCCcEEEEEEccCCCCCCceeEEEEcCC
Q psy3970 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPC 57 (104)
Q Consensus 27 p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~ 57 (104)
.+||+||+..+- . .+.+|||+-.
T Consensus 5 ~~LP~gWe~~~~--~------~G~~Yy~nh~ 27 (38)
T 2law_A 5 GPLPDGWEQAMT--Q------DGEIYYINHK 27 (38)
T ss_dssp CCCSSSCCEEEE--T------TTEEEEEETT
T ss_pred CCCCCCcEEEEC--C------CCCEEEEECC
Confidence 479999976654 2 3468999863
No 9
>2kyk_A E3 ubiquitin-protein ligase itchy homolog; LMP2A, PY motif, WW domain; NMR {Homo sapiens}
Probab=89.08 E-value=0.52 Score=26.06 Aligned_cols=23 Identities=35% Similarity=0.697 Sum_probs=16.1
Q ss_pred CCCCCCcEEEEEEccCCCCCCceeEEEEcCC
Q psy3970 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPC 57 (104)
Q Consensus 27 p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~ 57 (104)
++||+||....- . .+.+||++-.
T Consensus 5 ~~LP~gWe~~~d--~------~G~~YY~n~~ 27 (39)
T 2kyk_A 5 GPLPPGWERRVD--N------MGRIYYVDHF 27 (39)
T ss_dssp CCCCSSCEEEEC--T------TSCEEEECSS
T ss_pred CCCCCCcEEEEc--C------CCCEEEEECC
Confidence 479999976532 2 3468999864
No 10
>2ho2_A Fe65 protein, amyloid beta A4 protein-binding family B member 1; WW domain, beta sheet, Fe65, protein binding; 1.33A {Homo sapiens} SCOP: b.72.1.1 PDB: 2idh_A* 2oei_A
Probab=89.08 E-value=0.25 Score=27.95 Aligned_cols=21 Identities=29% Similarity=0.719 Sum_probs=14.0
Q ss_pred CCCCCCcEEEEEEccCCCCCCceeEEEEcC
Q psy3970 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSP 56 (104)
Q Consensus 27 p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP 56 (104)
++||+||...+- . .+ +||++-
T Consensus 2 ~~LP~GWe~~~d----~----~g-~YY~n~ 22 (38)
T 2ho2_A 2 SDLPAGWMRVQD----T----SG-TYYWHI 22 (38)
T ss_dssp CCSCTTEEEEEC----S----SC-EEEEET
T ss_pred CcCCCCceEEEe----C----CC-CEEEec
Confidence 479999965532 1 23 899875
No 11
>2ysg_A Syntaxin-binding protein 4; synip, STXBP4, WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=88.93 E-value=0.36 Score=27.04 Aligned_cols=23 Identities=17% Similarity=0.355 Sum_probs=15.6
Q ss_pred CCCCCCcEEEEEEccCCCCCCceeEEEEcCC
Q psy3970 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPC 57 (104)
Q Consensus 27 p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~ 57 (104)
.+||+||...+- . .+.+|||+-.
T Consensus 6 ~~LP~gWe~~~~--~------~Gr~Yy~nh~ 28 (40)
T 2ysg_A 6 SGLPYGWEEAYT--A------DGIKYFINHV 28 (40)
T ss_dssp SCCCTTEEEEEC--S------SSCEEEEESS
T ss_pred CCCCCCcEEEEc--C------CCCEEEEECC
Confidence 479999965532 2 3468999764
No 12
>2ysf_A E3 ubiquitin-protein ligase itchy homolog; AIP4, NAPP1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=87.98 E-value=0.4 Score=26.91 Aligned_cols=23 Identities=17% Similarity=0.284 Sum_probs=15.9
Q ss_pred CCCCCCcEEEEEEccCCCCCCceeEEEEcCC
Q psy3970 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPC 57 (104)
Q Consensus 27 p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~ 57 (104)
.+||+||...+- . .+.+|||+-.
T Consensus 6 ~~LP~gWe~~~~--~------~G~~Yy~nh~ 28 (40)
T 2ysf_A 6 SGLPEGWEMRFT--V------DGIPYFVDHN 28 (40)
T ss_dssp CCCCSSEEEEEC--T------TCCEEEEETT
T ss_pred CCCCcCcEEEEc--C------CCCEEEEECC
Confidence 479999976533 2 3468999764
No 13
>2jv4_A Peptidyl-prolyl CIS/trans isomerase; ppiase domain, WW domain group IV, rotamase; NMR {Emericella nidulans}
Probab=87.36 E-value=0.69 Score=27.81 Aligned_cols=24 Identities=33% Similarity=0.747 Sum_probs=15.1
Q ss_pred CCCCCCCcEEEEEEccCCCCCCceeEEEEcC
Q psy3970 26 CPQLPPGWYREEVTRNKGLSVGKVDVFYYSP 56 (104)
Q Consensus 26 ~p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP 56 (104)
..+||+||.. |.+- ..+-+|||+.
T Consensus 5 ~~~LP~GW~~----~~~~---~~Gr~YY~N~ 28 (54)
T 2jv4_A 5 NTGLPAGWEV----RHSN---SKNLPYYFNP 28 (54)
T ss_dssp CCCCCSSCCE----EECS---SSSCEEEEET
T ss_pred CCCCCCCcEE----EEEC---CCCCEEEEEC
Confidence 3579999973 2221 1346899976
No 14
>1wr4_A Ubiquitin-protein ligase NEDD4-2; all-beta; NMR {Mus musculus} PDB: 2lb2_A*
Probab=87.19 E-value=0.63 Score=24.93 Aligned_cols=23 Identities=30% Similarity=0.651 Sum_probs=15.4
Q ss_pred CCCCCCcEEEEEEccCCCCCCceeEEEEcCC
Q psy3970 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPC 57 (104)
Q Consensus 27 p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~ 57 (104)
++||+||+...- . .+.+||++-.
T Consensus 3 ~~LP~gWe~~~d--~------~g~~Yy~n~~ 25 (36)
T 1wr4_A 3 PGLPSGWEERKD--A------KGRTYYVNHN 25 (36)
T ss_dssp TTCCTTEEEEEC--S------SSCEEEEETT
T ss_pred CCCCCCCEEEEC--C------CCCEEEEECC
Confidence 479999965432 2 2457999864
No 15
>1e0m_A Wwprototype; SH3 prototype, protein design, de novo protein; NMR {} SCOP: k.22.1.1
Probab=87.00 E-value=0.48 Score=25.62 Aligned_cols=21 Identities=33% Similarity=0.869 Sum_probs=14.5
Q ss_pred CCCCCcEEEEEEccCCCCCCceeEEEEcC
Q psy3970 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSP 56 (104)
Q Consensus 28 ~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP 56 (104)
+||+||+...- . .+.+|||+-
T Consensus 3 ~LP~gW~~~~~--~------~G~~Yy~n~ 23 (37)
T 1e0m_A 3 GLPPGWDEYKT--H------NGKTYYYNH 23 (37)
T ss_dssp CSCTTEEEEEC--S------SCCEEEEET
T ss_pred CCCCCcEEEEC--C------CCCEEEEEC
Confidence 69999975432 2 345899876
No 16
>2e45_A Fe65 protein, amyloid beta A4 precursor protein-binding family B member 1; triple-stranded beta-sheet; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=86.62 E-value=0.69 Score=28.58 Aligned_cols=13 Identities=38% Similarity=0.897 Sum_probs=9.6
Q ss_pred cCCCCCCCcEEEE
Q psy3970 25 ECPQLPPGWYREE 37 (104)
Q Consensus 25 ~~p~Lp~GW~Rev 37 (104)
..++||+||++..
T Consensus 16 ~~~~LPpGW~~~~ 28 (55)
T 2e45_A 16 TDSDLPAGWMRVQ 28 (55)
T ss_dssp SCSCCCTTEEEEE
T ss_pred CCCCCCCCCeEee
Confidence 3568999996543
No 17
>1i5h_W Rnedd4, ubiquitin ligase NEDD4; NEDD4, WW domains, ENAC, PY motif, liddle syndrome, proline-rich, ligase; NMR {Rattus norvegicus} SCOP: b.72.1.1 PDB: 1yiu_A 2jo9_A 2joc_A*
Probab=86.52 E-value=0.74 Score=27.12 Aligned_cols=23 Identities=30% Similarity=0.644 Sum_probs=15.9
Q ss_pred CCCCCCcEEEEEEccCCCCCCceeEEEEcCC
Q psy3970 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPC 57 (104)
Q Consensus 27 p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~ 57 (104)
.+||+||...+- . .+.+|||+-.
T Consensus 10 ~~LP~gWe~~~~--~------~Gr~Yy~nh~ 32 (50)
T 1i5h_W 10 GPLPPGWEERTH--T------DGRVFFINHN 32 (50)
T ss_dssp SSCSTTEEEEEC--T------TSCEEEEETT
T ss_pred CCCCcCcEEEEc--C------CCCEEEEECC
Confidence 379999976532 2 3468999764
No 18
>2djy_A SMAD ubiquitination regulatory factor 2; beta sheet, polyproline type II helix, PPII, ligase/signaling protein complex; NMR {Homo sapiens} PDB: 2lb1_A
Probab=86.51 E-value=0.86 Score=25.91 Aligned_cols=24 Identities=25% Similarity=0.567 Sum_probs=16.3
Q ss_pred CCCCCCCcEEEEEEccCCCCCCceeEEEEcCC
Q psy3970 26 CPQLPPGWYREEVTRNKGLSVGKVDVFYYSPC 57 (104)
Q Consensus 26 ~p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~ 57 (104)
..+||+||...+- . .+-+|||+-.
T Consensus 5 ~~~LP~GWe~~~~--~------~G~~Yy~nh~ 28 (42)
T 2djy_A 5 SGPLPPGWEIRNT--A------TGRVYFVDHN 28 (42)
T ss_dssp CSCCCSSEEEEEC--S------SSCEEEEETT
T ss_pred cCCCCcCcEEEEC--C------CCCEEEEECC
Confidence 3479999976542 2 3468999764
No 19
>2ysh_A GAS-7, growth-arrest-specific protein 7; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=85.93 E-value=0.78 Score=25.36 Aligned_cols=23 Identities=26% Similarity=0.564 Sum_probs=15.5
Q ss_pred CCCCCCCcEEEEEEccCCCCCCceeEEEEcC
Q psy3970 26 CPQLPPGWYREEVTRNKGLSVGKVDVFYYSP 56 (104)
Q Consensus 26 ~p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP 56 (104)
.++||+||+...- . .+.+|||+.
T Consensus 5 ~~~LP~gW~~~~d--~------~Gr~YY~n~ 27 (40)
T 2ysh_A 5 SSGLPPGWQSYLS--P------QGRRYYVNT 27 (40)
T ss_dssp CSSCCTTCEEEEC--T------TSCEEEECS
T ss_pred CCCCCCCceEEEC--C------CCCEEEEEC
Confidence 4589999954332 2 245899987
No 20
>1wr7_A NEDD4-2; all-beta, ligase; NMR {Mus musculus}
Probab=85.75 E-value=0.94 Score=25.35 Aligned_cols=24 Identities=25% Similarity=0.450 Sum_probs=16.4
Q ss_pred CCCCCCCcEEEEEEccCCCCCCceeEEEEcCC
Q psy3970 26 CPQLPPGWYREEVTRNKGLSVGKVDVFYYSPC 57 (104)
Q Consensus 26 ~p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~ 57 (104)
.++||+||+..+- . .+.+|||+-.
T Consensus 6 ~~~LP~gWe~~~~--~------~G~~Yy~n~~ 29 (41)
T 1wr7_A 6 QSFLPPGWEMRIA--P------NGRPFFIDHN 29 (41)
T ss_dssp CCSSCTTEEEEEC--T------TSCEEEEETT
T ss_pred cCCCCCCcEEEEc--C------CCCEEEEECC
Confidence 3579999976543 2 2468999864
No 21
>1ymz_A CC45; artificial protein, computational design, unknown function; NMR {Synthetic} SCOP: k.22.1.1
Probab=85.74 E-value=0.61 Score=26.26 Aligned_cols=24 Identities=33% Similarity=0.714 Sum_probs=15.6
Q ss_pred CCCCCCCcEEEEEEccCCCCCCceeEEEEcCC
Q psy3970 26 CPQLPPGWYREEVTRNKGLSVGKVDVFYYSPC 57 (104)
Q Consensus 26 ~p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~ 57 (104)
-++||+||....- . .+.+|||+-.
T Consensus 6 ~~~LP~gW~~~~~--~------~Gr~YY~n~~ 29 (43)
T 1ymz_A 6 SMPLPPGWERRTD--V------EGKVYYFNVR 29 (43)
T ss_dssp -CCCCSSEEEEEC--T------TSCEEEEETT
T ss_pred CCCCCCCCEEEEC--C------CCCEEEEECC
Confidence 3579999965532 1 3468999763
No 22
>2dmv_A Itchy homolog E3 ubiquitin protein ligase; WW domain, three stranded antiparallel beta sheet, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=84.29 E-value=0.76 Score=26.00 Aligned_cols=24 Identities=29% Similarity=0.642 Sum_probs=16.5
Q ss_pred CCCCCCCcEEEEEEccCCCCCCceeEEEEcCC
Q psy3970 26 CPQLPPGWYREEVTRNKGLSVGKVDVFYYSPC 57 (104)
Q Consensus 26 ~p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~ 57 (104)
.++||+||+..+- . .+.+|||+-.
T Consensus 5 ~~~LP~GWe~~~d--~------~Gr~YY~n~~ 28 (43)
T 2dmv_A 5 SSGLPPGWEQRVD--Q------HGRVYYVDHV 28 (43)
T ss_dssp CCSCCTTEEEEEC--T------TSCEEEEETT
T ss_pred CCCCCCCceEEEC--C------CCCEEEEECC
Confidence 3589999966543 1 3468999763
No 23
>2l4j_A YES-associated protein 2 (YAP2); WW domain, medaka, transcription; NMR {Oryzias latipes}
Probab=84.17 E-value=1.1 Score=25.88 Aligned_cols=23 Identities=22% Similarity=0.554 Sum_probs=16.0
Q ss_pred CCCCCCcEEEEEEccCCCCCCceeEEEEcCC
Q psy3970 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPC 57 (104)
Q Consensus 27 p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~ 57 (104)
.+||+||...+- . .+.+|||+-.
T Consensus 10 ~~LP~gWe~~~~--~------~G~~Yyinh~ 32 (46)
T 2l4j_A 10 GPLPEGWEQAIT--P------EGEIYYINHK 32 (46)
T ss_dssp SCCCTTCEEEEC--T------TSCEEEEETT
T ss_pred CCCCcCceeEEC--C------CCCEEEEECC
Confidence 379999976543 2 3468999764
No 24
>1wmv_A WWOX, WW domain containing oxidoreductase; all-beta, apoptosis; NMR {Homo sapiens}
Probab=82.73 E-value=1.4 Score=26.31 Aligned_cols=24 Identities=29% Similarity=0.563 Sum_probs=16.1
Q ss_pred CCCCCCCcEEEEEEccCCCCCCceeEEEEcCC
Q psy3970 26 CPQLPPGWYREEVTRNKGLSVGKVDVFYYSPC 57 (104)
Q Consensus 26 ~p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~ 57 (104)
..+||+||...+- . .+-+|||+-.
T Consensus 9 ~~~LP~GWe~~~~--~------~G~~Yyinh~ 32 (54)
T 1wmv_A 9 AGDLPYGWEQETD--E------NGQVFFVDHI 32 (54)
T ss_dssp SSCSCTTEEEEEC--T------TSCEEEEESS
T ss_pred CCCCCcCcEEEEC--C------CCCEEEEeCC
Confidence 3479999976543 2 3468999764
No 25
>2ez5_W Dnedd4, E3 ubiquitin-protein ligase NEDD4; WW domain, PY motif, binding affinity, signalling protein,ligase; NMR {Drosophila melanogaster}
Probab=82.53 E-value=1.6 Score=25.20 Aligned_cols=23 Identities=22% Similarity=0.517 Sum_probs=15.9
Q ss_pred CCCCCCcEEEEEEccCCCCCCceeEEEEcCC
Q psy3970 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPC 57 (104)
Q Consensus 27 p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~ 57 (104)
.+||+||...+- . .+.+|||+-.
T Consensus 9 ~~LP~gWe~~~~--~------~Gr~Yyinh~ 31 (46)
T 2ez5_W 9 EPLPPRWSMQVA--P------NGRTFFIDHA 31 (46)
T ss_dssp CCCCTTEEEEEC--T------TSSEEEEETT
T ss_pred CCCCcCcEEEEc--C------CCCEEEEECC
Confidence 379999976543 2 3468999764
No 26
>2dwv_A Salvador homolog 1 protein; WW domain, dimer, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=82.30 E-value=2.3 Score=24.91 Aligned_cols=29 Identities=28% Similarity=0.570 Sum_probs=17.9
Q ss_pred ccccccCCCCCCCcEEEEEEccCCCCCCceeEEEEcCC
Q psy3970 20 TKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPC 57 (104)
Q Consensus 20 ~~~~~~~p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~ 57 (104)
+.++.. ++||+||....- . .+-+||++-.
T Consensus 6 ~~P~~~-~~LP~GWe~~~d--~------~g~~YYvnh~ 34 (49)
T 2dwv_A 6 SGPLER-EGLPPGWERVES--S------EFGTYYVDHT 34 (49)
T ss_dssp CCSCCS-SCCCTTEEEEEE--T------TTEEEEEETT
T ss_pred cCCCCC-CCCCcCcEEEEC--C------CCCEEEEECC
Confidence 334433 479999966543 1 2248999764
No 27
>2ysb_A Salvador homolog 1 protein; WW domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: k.22.1.1
Probab=82.22 E-value=1.4 Score=25.90 Aligned_cols=24 Identities=25% Similarity=0.470 Sum_probs=16.3
Q ss_pred CCCCCCCcEEEEEEccCCCCCCceeEEEEcCC
Q psy3970 26 CPQLPPGWYREEVTRNKGLSVGKVDVFYYSPC 57 (104)
Q Consensus 26 ~p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~ 57 (104)
..+||+||...+- . .+.+|||+-.
T Consensus 9 ~~~LP~gWe~~~~--~------~Gr~Yy~nh~ 32 (49)
T 2ysb_A 9 DLPLPPGWSVDWT--M------RGRKYYIDHN 32 (49)
T ss_dssp CCCCCTTEEEEEC--S------SSCEEEEETT
T ss_pred CCCCCCCceEEEC--C------CCCEEEEEcC
Confidence 3479999976543 1 3468999764
No 28
>2yse_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI-1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.15 E-value=1.3 Score=27.34 Aligned_cols=25 Identities=24% Similarity=0.571 Sum_probs=16.5
Q ss_pred CCCCCCcEEEEEEccCCCCCCceeEEEEcCCCc
Q psy3970 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGK 59 (104)
Q Consensus 27 p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~Gk 59 (104)
.+||+||...+- . .+-+|||+-.-+
T Consensus 12 ~~LP~GWE~~~d--~------~Gr~YYvnh~tk 36 (60)
T 2yse_A 12 LELPAGWEKIED--P------VYGIYYVDHINR 36 (60)
T ss_dssp SSCCSSEEEEEC--S------SSCEEEEETTTT
T ss_pred CCCCCCcEEEEC--C------CCCEEEEeCCCC
Confidence 479999965532 2 235899987533
No 29
>2zaj_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; BAI1-associated protein 1 (BAP-1); NMR {Homo sapiens}
Probab=80.89 E-value=2.7 Score=24.73 Aligned_cols=24 Identities=25% Similarity=0.511 Sum_probs=16.0
Q ss_pred CCCCCCCcEEEEEEccCCCCCCceeEEEEcCC
Q psy3970 26 CPQLPPGWYREEVTRNKGLSVGKVDVFYYSPC 57 (104)
Q Consensus 26 ~p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~ 57 (104)
.++||+||....- .. +-+||++-.
T Consensus 11 ~~~LP~GWe~~~d--~~------Gr~YYvnh~ 34 (49)
T 2zaj_A 11 ELELPAGWEKIED--PV------YGIYYVDHI 34 (49)
T ss_dssp SSCCCTTEEEEEE--TT------TEEEEEETT
T ss_pred CCCCCcCceEEEc--CC------CCEEEEeCC
Confidence 3579999976543 22 248999764
No 30
>2jmf_A E3 ubiquitin-protein ligase suppressor of deltex; WW domain, solution, complex, ligase/signaling protein complex; NMR {Drosophila melanogaster} SCOP: b.72.1.1 PDB: 2op7_A
Probab=80.43 E-value=1.8 Score=25.80 Aligned_cols=24 Identities=25% Similarity=0.461 Sum_probs=16.1
Q ss_pred CCCCCCCcEEEEEEccCCCCCCceeEEEEcCC
Q psy3970 26 CPQLPPGWYREEVTRNKGLSVGKVDVFYYSPC 57 (104)
Q Consensus 26 ~p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~ 57 (104)
..+||+||...+- . .+-+||++-.
T Consensus 16 ~~~LP~GWe~~~~--~------~Gr~Yyinh~ 39 (53)
T 2jmf_A 16 EGPLPPGWEIRYT--A------AGERFFVDHN 39 (53)
T ss_dssp CSCCCTTEEEEEC--T------TSCEEEEETT
T ss_pred CCCCCcCcEEEEc--C------CCCEEEEeCC
Confidence 3479999976543 2 3468999764
No 31
>1yw5_A Peptidyl prolyl CIS/trans isomerase; WW-domain, ppiase domain, ordered linker; 1.60A {Candida albicans}
Probab=79.50 E-value=2.2 Score=30.26 Aligned_cols=40 Identities=15% Similarity=0.301 Sum_probs=27.8
Q ss_pred CCCCCcEEEEEEccCCCCCCceeEEEEcCCCceec-------cHHHHHHHHhCC
Q psy3970 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLR-------TRSEVLQVIRGN 74 (104)
Q Consensus 28 ~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~GkkfR-------Sk~eV~ryL~~~ 74 (104)
.||+||...+. |. +...||+.+.-+..+ +..||..|+..+
T Consensus 7 ~lp~~w~~~~s-~s------~~~~Yy~~~~~~~~~~~~~~~vs~~ei~~yy~~~ 53 (177)
T 1yw5_A 7 GLPPNWTIRVS-RS------HNKEYFLNQSTNESSWDPPYGTDKEVLNAYIAKF 53 (177)
T ss_dssp CCCTTEEEEEC-SS------TTCEEEEETTTCCEESSCCTTCCHHHHHHHHHHH
T ss_pred CCCchHHHHhc-cc------CCchhhhhHHHhhHhhcCcccCCHHHHHHHHHHh
Confidence 59999965443 33 446899988544443 778999999753
No 32
>2ysd_A Membrane-associated guanylate kinase, WW and PDZ domain-containing protein 1; MAGI1, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.22.1.1
Probab=72.67 E-value=4.2 Score=24.54 Aligned_cols=23 Identities=17% Similarity=0.413 Sum_probs=15.8
Q ss_pred CCCCCCcEEEEEEccCCCCCCceeEEEEcCC
Q psy3970 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSPC 57 (104)
Q Consensus 27 p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~ 57 (104)
.+||+||...+- . .+.+|||+-.
T Consensus 13 ~~LP~GWe~~~~--~------~Gr~Yyinh~ 35 (57)
T 2ysd_A 13 GPLPENWEMAYT--E------NGEVYFIDHN 35 (57)
T ss_dssp CSCCSSEEEEEC--S------SCCEEEEETT
T ss_pred CCCCcCcEEEEC--C------CCCEEEEECC
Confidence 379999976533 1 3568999764
No 33
>2kxq_A E3 ubiquitin-protein ligase smurf2; WW, smurf2, TGF-beta, modular binding, protein BIN; NMR {Homo sapiens} PDB: 2lb0_A* 2laz_A*
Probab=69.97 E-value=6.1 Score=25.28 Aligned_cols=22 Identities=18% Similarity=0.496 Sum_probs=14.9
Q ss_pred CCCCCcEEEEEEccCCCCCCceeEEEEcCC
Q psy3970 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPC 57 (104)
Q Consensus 28 ~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~ 57 (104)
+||+||...+- . .+-+|||+..
T Consensus 9 ~LP~gWe~~~~--~------~Gr~YY~n~~ 30 (90)
T 2kxq_A 9 DLPEGYEQRTT--Q------QGQVYFLHTQ 30 (90)
T ss_dssp SCCSSCEEEEE--T------TTEEEEEETT
T ss_pred CCCCCcEEEEC--C------CCCEEEEECC
Confidence 69999965543 2 2358999763
No 34
>2ysc_A Amyloid beta A4 precursor protein-binding family B member 3; Fe65-like protein 2, WW domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.72.1.1
Probab=64.33 E-value=3.9 Score=22.92 Aligned_cols=10 Identities=50% Similarity=1.185 Sum_probs=7.9
Q ss_pred CCCCCCcEEE
Q psy3970 27 PQLPPGWYRE 36 (104)
Q Consensus 27 p~Lp~GW~Re 36 (104)
.+||+||...
T Consensus 7 ~~LP~GWe~~ 16 (39)
T 2ysc_A 7 GGLPPGWRKI 16 (39)
T ss_dssp CCCCTTEEEE
T ss_pred CCCCCCcEEE
Confidence 4799999654
No 35
>1tk7_A CG4244-PB; WW domain, notch, signaling protein; NMR {Drosophila melanogaster} SCOP: b.72.1.1 b.72.1.1
Probab=62.61 E-value=7.9 Score=24.64 Aligned_cols=21 Identities=24% Similarity=0.631 Sum_probs=14.4
Q ss_pred CCCCCcEEEEEEccCCCCCCceeEEEEcC
Q psy3970 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSP 56 (104)
Q Consensus 28 ~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP 56 (104)
+||+||...+- . .+-+|||+-
T Consensus 12 ~LP~gWe~~~~--~------~Gr~Yy~n~ 32 (88)
T 1tk7_A 12 PLPDGWEKKIQ--S------DNRVYFVNH 32 (88)
T ss_dssp SSSSSCCEEEE--T------TTEEEEEET
T ss_pred CCCCCcEEEEC--C------CCCEEEEEC
Confidence 69999966643 2 245888854
No 36
>2l3a_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; NMR {Streptococcus pneumoniae} PDB: 3obh_A*
Probab=60.95 E-value=8.2 Score=25.47 Aligned_cols=44 Identities=20% Similarity=0.246 Sum_probs=34.5
Q ss_pred CCCCCCCcEEEEEEccCCCCCCceeEEEEcCCCceec-----cHHHHHH
Q psy3970 26 CPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKLR-----TRSEVLQ 69 (104)
Q Consensus 26 ~p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~GkkfR-----Sk~eV~r 69 (104)
++.-+.||++|+-+-+.+...-++|+-=.+|+..|+- +..|+..
T Consensus 18 LSe~~kGW~KELNlVSWNg~~pKyDIR~Wspdh~kMGKGITLT~eE~~~ 66 (82)
T 2l3a_A 18 LSENEKGWTKEINRVSFNGAPAKFDIRAWSPDHTKMGKGITLSNEEFQT 66 (82)
T ss_dssp EEEETTTEEEEEEEEEESSSCEEEEEEEECSTTCCCCCCEEECHHHHHH
T ss_pred eccCCCCceEEEEEEeECCCCCCccccccCcchhhccCcccccHHHHHH
Confidence 4456899999999999988778999999999866552 5555544
No 37
>3pm7_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG; 2.00A {Enterococcus faecalis}
Probab=59.97 E-value=12 Score=24.57 Aligned_cols=36 Identities=19% Similarity=0.212 Sum_probs=30.8
Q ss_pred CCCCCCCcEEEEEEccCCCCCCceeEEEEcCCCcee
Q psy3970 26 CPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKL 61 (104)
Q Consensus 26 ~p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~Gkkf 61 (104)
++.-+.||++|+-+-+.+...-++|+-=.+|+..|+
T Consensus 16 LS~~~~GW~KELNlVSWN~~~pKyDIR~W~pdh~kM 51 (80)
T 3pm7_A 16 LSENARGWRKELNLISWNGRPPKFDLREWAPDHEKM 51 (80)
T ss_dssp EEECTTSCEEEEEEECGGGCCCEEEEEEECTTSSSE
T ss_pred eccCCCCceEEEEEEEECCCCCCccccccCcchhhc
Confidence 345689999999999998888899999999986655
No 38
>3l4h_A E3 ubiquitin-protein ligase HECW1; E3 ligase, WW domain, UBL-conjugation pathway, structural GE structural genomics consortium, SGC, coiled coil; HET: MSE; 1.80A {Homo sapiens}
Probab=57.57 E-value=7.5 Score=26.66 Aligned_cols=24 Identities=21% Similarity=0.483 Sum_probs=15.9
Q ss_pred CCCCCcEEEEEEccCCCCCCceeEEEEcCCCc
Q psy3970 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPCGK 59 (104)
Q Consensus 28 ~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~Gk 59 (104)
+||+||...+- ..+.+||++-.-+
T Consensus 72 pLP~GWE~r~d--------~~Gr~YfIdH~tk 95 (109)
T 3l4h_A 72 ELPRGWEIKTD--------QQGKSFFVDHNSR 95 (109)
T ss_dssp CCCTTEEEEEC--------TTCCEEEEETTTT
T ss_pred CCCCCCeEEEC--------CCCCEEEEeCCCC
Confidence 69999954432 1456899976533
No 39
>4g06_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium (NESG); HET: DT; 2.90A {Streptococcus pneumoniae}
Probab=54.91 E-value=18 Score=23.59 Aligned_cols=37 Identities=22% Similarity=0.263 Sum_probs=31.4
Q ss_pred cCCCCCCCcEEEEEEccCCCCCCceeEEEEcCCCcee
Q psy3970 25 ECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKL 61 (104)
Q Consensus 25 ~~p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~Gkkf 61 (104)
.++.-+.||++|+-+-+.+...-++|+-=.+|+..++
T Consensus 22 vLS~~~~GW~KELNlVSWN~~~pKyDIR~W~pdh~kM 58 (79)
T 4g06_A 22 TLSENEKGWTKEINRVSFNGAPAKFDIRAWSPDHTKM 58 (79)
T ss_dssp EEECCTTSCEEEEEEEEETTCCCEEEEEEECTTSSCB
T ss_pred EeccCCCCceEEEEEEEeCCCCCCccccccCcccccc
Confidence 3456789999999999999888899999999986554
No 40
>3tc5_A Peptidyl-prolyl CIS-trans isomerase NIMA-interact; PIN1 mutant (R14A), oncogenic transformation, small molecule cycle, rotamase, phosphoprotein; HET: 3T5 P6G; 1.40A {Homo sapiens} PDB: 2itk_A* 2q5a_A* 2xp3_A* 2xp4_A* 2xp5_A* 2xp7_A* 2xp8_A* 2xp9_A* 2xpa_A* 2xpb_A* 3kab_A* 3kag_A* 3kah_A* 3kai_A* 3kce_A* 3ntp_A* 3odk_A* 3oob_A* 2zr6_A* 1f8a_B* ...
Probab=46.83 E-value=13 Score=26.24 Aligned_cols=23 Identities=30% Similarity=0.811 Sum_probs=13.1
Q ss_pred CCCCCCcEEEEEEccCCCCCCceeEEEEcC
Q psy3970 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSP 56 (104)
Q Consensus 27 p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP 56 (104)
++||+||... .+- ..+-+||++.
T Consensus 8 ~~LP~gWe~~----~~~---~~g~~yy~n~ 30 (166)
T 3tc5_A 8 EKLPPGWEKA----MSR---SSGRVYYFNH 30 (166)
T ss_dssp --CCTTEEEE----ECT---TTCCEEEEET
T ss_pred CCCCCCceEE----EcC---CCCCEEEEEC
Confidence 5799999532 221 1456799864
No 41
>1fme_A FSD-EY peptide; beta-BETA-alpha, zinc finger, designed protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1fsd_A 1fsv_A 2k6r_A* 1psv_A
Probab=40.40 E-value=19 Score=19.05 Aligned_cols=17 Identities=24% Similarity=0.429 Sum_probs=15.2
Q ss_pred CCceeccHHHHHHHHhC
Q psy3970 57 CGKKLRTRSEVLQVIRG 73 (104)
Q Consensus 57 ~GkkfRSk~eV~ryL~~ 73 (104)
.|+.||.-.|+..|+++
T Consensus 8 kgrtfrnekelrdfiek 24 (28)
T 1fme_A 8 KGRTFRNEKELRDFIEK 24 (28)
T ss_dssp SSCEECCHHHHHHHHHH
T ss_pred cccccccHHHHHHHHHH
Confidence 58999999999999874
No 42
>1fiw_L Beta-acrosin light chain; anti-parallel beta-barrel, hydrolase; HET: NAG FUL BMA MAN PBZ; 2.10A {Ovis aries} SCOP: b.47.1.2
Probab=39.55 E-value=5.9 Score=20.99 Aligned_cols=11 Identities=36% Similarity=1.026 Sum_probs=8.8
Q ss_pred cCCCceeccHH
Q psy3970 55 SPCGKKLRTRS 65 (104)
Q Consensus 55 sP~GkkfRSk~ 65 (104)
-|||.+||...
T Consensus 7 gpCGlrfrqn~ 17 (26)
T 1fiw_L 7 GPCGVRFRQNR 17 (26)
T ss_pred cccCceeccCc
Confidence 48999998754
No 43
>1fiz_L Beta-acrosin light chain; anti-parallel beta-barrel, hydrolase; HET: NDG FUL BMA PBZ; 2.90A {Sus scrofa} SCOP: b.47.1.2
Probab=39.46 E-value=6 Score=20.99 Aligned_cols=11 Identities=36% Similarity=1.029 Sum_probs=8.8
Q ss_pred cCCCceeccHH
Q psy3970 55 SPCGKKLRTRS 65 (104)
Q Consensus 55 sP~GkkfRSk~ 65 (104)
-|||.+||...
T Consensus 8 gpCGlrfrqn~ 18 (26)
T 1fiz_L 8 GPCGLRFRQKL 18 (26)
T ss_pred ccccceeccCc
Confidence 48999998754
No 44
>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=39.35 E-value=27 Score=18.47 Aligned_cols=24 Identities=8% Similarity=0.317 Sum_probs=18.9
Q ss_pred eeEEEEcC---CCceeccHHHHHHHHh
Q psy3970 49 VDVFYYSP---CGKKLRTRSEVLQVIR 72 (104)
Q Consensus 49 ~DVYY~sP---~GkkfRSk~eV~ryL~ 72 (104)
.+--|.-+ ||+.|.++..|.+.+.
T Consensus 6 gekp~~C~~~~C~k~F~~~~~L~~H~r 32 (38)
T 2eln_A 6 SGILLKCPTDGCDYSTPDKYKLQAHLK 32 (38)
T ss_dssp CCCCEECSSSSCCCEESCHHHHHHHHH
T ss_pred CCCCCCCCCCCCCCccCCHHHHHHHHH
Confidence 34446665 8999999999999875
No 45
>1eg3_A Dystrophin; EF-hand like domain, WW domain, structural protein; 2.00A {Homo sapiens} SCOP: a.39.1.7 a.39.1.7 b.72.1.1 PDB: 1eg4_A
Probab=38.63 E-value=15 Score=28.14 Aligned_cols=22 Identities=14% Similarity=0.208 Sum_probs=15.5
Q ss_pred CCCCCcEEEEEEccCCCCCCceeEEEEcCC
Q psy3970 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPC 57 (104)
Q Consensus 28 ~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~ 57 (104)
+||+||.+.+. . .+-+||++=+
T Consensus 11 ~l~~~we~~~~--~------~~~~y~~~h~ 32 (261)
T 1eg3_A 11 SVQGPWERAIS--P------NKVPYYINHE 32 (261)
T ss_dssp TCCTTEEEEEC--T------TSCEEEEETT
T ss_pred CCCCCcceeEC--C------CCCeEeecCC
Confidence 79999976553 2 3468999763
No 46
>3lyd_A Uncharacterized protein; PSI-2, MCSG, GEBA, genomic encyclopae bacteria and archaea, structural genomics, protein structur initiative; HET: MSE; 1.45A {Jonesia denitrificans}
Probab=38.15 E-value=10 Score=27.35 Aligned_cols=30 Identities=17% Similarity=0.422 Sum_probs=19.2
Q ss_pred CCCCccccccccccccccccccCCCCCCCcEEE
Q psy3970 4 NDSPLSLVSNLLKMLPTKKRYECPQLPPGWYRE 36 (104)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~p~Lp~GW~Re 36 (104)
||-| .|.=-..++.+.+.+.+ +.|+||.+-
T Consensus 2 ~~~~--~~~~ps~~fp~~p~~~v-~~P~gWe~~ 31 (161)
T 3lyd_A 2 NAMP--SIRYPSTEFPALTGFTV-PIPETWQPD 31 (161)
T ss_dssp --CC--EEEESCSSSCCCCEEEE-ECCTTEEEC
T ss_pred CCCc--ceeCCccccCCCceeec-cCCCCceEc
Confidence 4444 34444566777777887 589999765
No 47
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1
Probab=37.67 E-value=36 Score=16.30 Aligned_cols=20 Identities=10% Similarity=0.448 Sum_probs=16.4
Q ss_pred EEcC---CCceeccHHHHHHHHh
Q psy3970 53 YYSP---CGKKLRTRSEVLQVIR 72 (104)
Q Consensus 53 Y~sP---~GkkfRSk~eV~ryL~ 72 (104)
|.-+ ||+.|.+...|.+.+.
T Consensus 7 ~~C~~~~C~k~f~~~~~L~~H~~ 29 (38)
T 1bhi_A 7 FLCTAPGCGQRFTNEDHLAVHKH 29 (38)
T ss_dssp EECCCTTTCCEESSHHHHHHHHH
T ss_pred eECCCCCCCcccCCHHHHHHHHH
Confidence 4445 9999999999998865
No 48
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1
Probab=37.31 E-value=22 Score=15.49 Aligned_cols=17 Identities=18% Similarity=0.354 Sum_probs=14.5
Q ss_pred CCCceeccHHHHHHHHh
Q psy3970 56 PCGKKLRTRSEVLQVIR 72 (104)
Q Consensus 56 P~GkkfRSk~eV~ryL~ 72 (104)
-+|+.|.+...+.+...
T Consensus 6 ~C~k~f~~~~~l~~H~~ 22 (27)
T 1znf_A 6 LCERSFVEKSALSRHQR 22 (27)
T ss_dssp SSCCBCSSHHHHHHHGG
T ss_pred CCCCcCCCHHHHHHHHH
Confidence 48999999999988764
No 49
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4
Probab=34.21 E-value=19 Score=24.94 Aligned_cols=23 Identities=9% Similarity=0.231 Sum_probs=20.7
Q ss_pred EEEEcCCCceeccHHHHHHHHhC
Q psy3970 51 VFYYSPCGKKLRTRSEVLQVIRG 73 (104)
Q Consensus 51 VYY~sP~GkkfRSk~eV~ryL~~ 73 (104)
-||..+|||.|.+...+..++..
T Consensus 50 pfyC~~C~K~F~~~~~L~~H~rs 72 (124)
T 1zr9_A 50 LHRCLACARYFIDSTNLKTHFRS 72 (124)
T ss_dssp CSEETTTTEECSSHHHHHHHTTC
T ss_pred ceEcccCcchhCCHHHHHHHHhh
Confidence 48999999999999999998864
No 50
>1jmq_A YAP65, 65 kDa YES-associated protein; polyproline ligand, YAP65 mutant, structural protein; NMR {Homo sapiens} SCOP: b.72.1.1 PDB: 1k9q_A* 1k9r_A 1k5r_A* 2lax_A* 2lay_A*
Probab=33.59 E-value=13 Score=20.88 Aligned_cols=8 Identities=50% Similarity=1.170 Sum_probs=6.6
Q ss_pred CCCCCcEE
Q psy3970 28 QLPPGWYR 35 (104)
Q Consensus 28 ~Lp~GW~R 35 (104)
+||.||+.
T Consensus 8 ~LP~GWe~ 15 (46)
T 1jmq_A 8 PLPAGWEM 15 (46)
T ss_dssp CCCTTBCC
T ss_pred CCCcCcEE
Confidence 69999953
No 51
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}
Probab=33.25 E-value=45 Score=16.07 Aligned_cols=16 Identities=31% Similarity=0.542 Sum_probs=14.2
Q ss_pred CCceeccHHHHHHHHh
Q psy3970 57 CGKKLRTRSEVLQVIR 72 (104)
Q Consensus 57 ~GkkfRSk~eV~ryL~ 72 (104)
||+.|.+...|.+.+.
T Consensus 16 C~k~f~~~~~L~~H~~ 31 (37)
T 1va1_A 16 CGKVYGKTSHLRAHLR 31 (37)
T ss_dssp CCCEESCHHHHHHHHH
T ss_pred CCCccCCHHHHHHHHH
Confidence 9999999999988764
No 52
>2jx8_A Hpcif1, phosphorylated CTD-interacting factor 1; protein fragment, WW domain, triple-standed beta-sheet, alpha-helix, nucleus, phosphorylation; NMR {Homo sapiens}
Probab=33.08 E-value=12 Score=22.09 Aligned_cols=23 Identities=17% Similarity=0.455 Sum_probs=14.6
Q ss_pred CCCCCCcEEEEEEccCCCCCCceeEEEEcC
Q psy3970 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSP 56 (104)
Q Consensus 27 p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP 56 (104)
+.||.||+...- +. .+-+|||+.
T Consensus 9 ~~LP~gW~~~~~-~~------~gr~YY~N~ 31 (52)
T 2jx8_A 9 ELVHAGWEKCWS-RR------ENRPYYFNR 31 (52)
T ss_dssp HHHHHTCCEEEE-TT------TTEEEEEET
T ss_pred CCCCcCcEEEEc-cc------cCCEEEEEC
Confidence 368999965443 22 235788876
No 53
>2l5f_A PRE-mRNA-processing factor 40 homolog A; 2WW, HYPA, FBP11, protein binding; NMR {Homo sapiens}
Probab=31.88 E-value=25 Score=22.45 Aligned_cols=24 Identities=17% Similarity=0.499 Sum_probs=15.3
Q ss_pred CCCCCcEEEEEEccCCCCCCceeEEEEcC-CCc
Q psy3970 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSP-CGK 59 (104)
Q Consensus 28 ~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP-~Gk 59 (104)
+||.||...+-. +| -+|||+. +|.
T Consensus 11 ~lp~~W~e~~~~--~G------r~YYyN~~T~~ 35 (92)
T 2l5f_A 11 GAKSMWTEHKSP--DG------RTYYYNTETKQ 35 (92)
T ss_dssp BTTTTEEEEECT--TS------CEEEEETTTTE
T ss_pred CCCCCcEEEEcC--CC------CEEEEECCCCc
Confidence 689999654431 33 4688876 444
No 54
>2ltd_A Uncharacterized protein YDBC; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Lactococcus lactis subsp}
Probab=37.77 E-value=10 Score=24.96 Aligned_cols=44 Identities=18% Similarity=0.151 Sum_probs=34.5
Q ss_pred ccccccccCCCCCCCcEEEEEEccCCCCCCceeEEEEcCCCcee
Q psy3970 18 LPTKKRYECPQLPPGWYREEVTRNKGLSVGKVDVFYYSPCGKKL 61 (104)
Q Consensus 18 ~~~~~~~~~p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~Gkkf 61 (104)
.|.+.--.++.-+.||++|+-+-+.+...-++|+-=.+|+..|+
T Consensus 8 EI~e~igvLSe~~kGW~KELNlVSWNg~~pKyDIR~Wspdh~kM 51 (80)
T 2ltd_A 8 EIIEELIVLSENAKGWRKELNRVSWNDAEPKYDIRTWSPDHEKM 51 (80)
Confidence 34444444566789999999999998877899999999986655
No 55
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A
Probab=31.54 E-value=38 Score=14.75 Aligned_cols=17 Identities=18% Similarity=0.528 Sum_probs=14.7
Q ss_pred CCCceeccHHHHHHHHh
Q psy3970 56 PCGKKLRTRSEVLQVIR 72 (104)
Q Consensus 56 P~GkkfRSk~eV~ryL~ 72 (104)
-+|+.|.+...+.+.+.
T Consensus 9 ~C~k~f~~~~~l~~H~~ 25 (29)
T 2ab3_A 9 NCGRSFNDRRKLNRHKK 25 (29)
T ss_dssp TTCEEESSHHHHHHHHG
T ss_pred cCcCccCCHHHHHHHHH
Confidence 68999999999988764
No 56
>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=30.50 E-value=41 Score=14.71 Aligned_cols=18 Identities=28% Similarity=0.425 Sum_probs=14.7
Q ss_pred cCCCceeccHHHHHHHHh
Q psy3970 55 SPCGKKLRTRSEVLQVIR 72 (104)
Q Consensus 55 sP~GkkfRSk~eV~ryL~ 72 (104)
.-+|+.|.+...+.+.+.
T Consensus 7 ~~C~k~f~~~~~l~~H~~ 24 (27)
T 2kvh_A 7 SLCPQRSRDFSAMTKHLR 24 (27)
T ss_dssp SSSSCEESSHHHHHHHHH
T ss_pred CCcChhhCCHHHHHHHHH
Confidence 448999999999987753
No 57
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A
Probab=30.37 E-value=32 Score=15.67 Aligned_cols=18 Identities=28% Similarity=0.512 Sum_probs=15.4
Q ss_pred CCCceeccHHHHHHHHhC
Q psy3970 56 PCGKKLRTRSEVLQVIRG 73 (104)
Q Consensus 56 P~GkkfRSk~eV~ryL~~ 73 (104)
-||+.|.+...|.+.+..
T Consensus 9 ~C~k~f~~~~~L~~H~~~ 26 (31)
T 1sp2_A 9 YCGKRFTRSDELQRHKRT 26 (31)
T ss_dssp TCCCBCSSHHHHHHHHTT
T ss_pred CCCcccCCHhHHHHHHHH
Confidence 489999999999988754
No 58
>1e0n_A Hypothetical protein; YJQ8WW domain, WW domain, saccharomyces cerevisae, YJQ8 protein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1
Probab=29.94 E-value=51 Score=16.77 Aligned_cols=18 Identities=33% Similarity=0.905 Sum_probs=11.4
Q ss_pred CCcEEEEEEccCCCCCCceeEEEEcCC
Q psy3970 31 PGWYREEVTRNKGLSVGKVDVFYYSPC 57 (104)
Q Consensus 31 ~GW~Rev~~R~~g~s~gk~DVYY~sP~ 57 (104)
+||+ ..+.+|. .|||+..
T Consensus 1 ~gWe---~~~~~g~------~YYyN~~ 18 (27)
T 1e0n_A 1 PGWE---IIHENGR------PLYYNAE 18 (27)
T ss_dssp CCEE---EEESSSS------EEEEETT
T ss_pred CCCe---EECCCCC------eEEEECC
Confidence 5887 4455543 6888773
No 59
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}
Probab=29.36 E-value=43 Score=14.63 Aligned_cols=19 Identities=26% Similarity=0.517 Sum_probs=15.5
Q ss_pred EcCCCceeccHHHHHHHHh
Q psy3970 54 YSPCGKKLRTRSEVLQVIR 72 (104)
Q Consensus 54 ~sP~GkkfRSk~eV~ryL~ 72 (104)
.+-+|+.|.+...+.+...
T Consensus 6 C~~C~k~f~~~~~l~~H~~ 24 (28)
T 2kvf_A 6 CSVCGKRFSLKHQMETHYR 24 (28)
T ss_dssp CSSSCCEESCHHHHHHHHT
T ss_pred CCCCCcccCCHHHHHHHHH
Confidence 3458999999999988764
No 60
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1
Probab=28.95 E-value=51 Score=15.32 Aligned_cols=22 Identities=14% Similarity=0.288 Sum_probs=17.4
Q ss_pred EEEcCCCceeccHHHHHHHHhC
Q psy3970 52 FYYSPCGKKLRTRSEVLQVIRG 73 (104)
Q Consensus 52 YY~sP~GkkfRSk~eV~ryL~~ 73 (104)
|-..-||+.|.+...|.+.+..
T Consensus 8 ~~C~~C~k~f~~~~~l~~H~~~ 29 (35)
T 1srk_A 8 FVCRICLSAFTTKANCARHLKV 29 (35)
T ss_dssp EECSSSCCEESSHHHHHHHHGG
T ss_pred eeCCCCCcccCCHHHHHHHHHH
Confidence 4445599999999999988753
No 61
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A
Probab=28.77 E-value=37 Score=14.80 Aligned_cols=18 Identities=11% Similarity=0.327 Sum_probs=14.8
Q ss_pred cCCCceeccHHHHHHHHh
Q psy3970 55 SPCGKKLRTRSEVLQVIR 72 (104)
Q Consensus 55 sP~GkkfRSk~eV~ryL~ 72 (104)
.-+|+.|.+...|.+.+.
T Consensus 6 ~~C~~~f~~~~~l~~H~~ 23 (29)
T 1ard_A 6 EVCTRAFARQEHLKRHYR 23 (29)
T ss_dssp TTTCCBCSSHHHHHHHHH
T ss_pred CCCCcccCCHHHHHHHHH
Confidence 348999999999988764
No 62
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}
Probab=27.90 E-value=52 Score=15.13 Aligned_cols=22 Identities=23% Similarity=0.326 Sum_probs=17.2
Q ss_pred EEEcCCCceeccHHHHHHHHhC
Q psy3970 52 FYYSPCGKKLRTRSEVLQVIRG 73 (104)
Q Consensus 52 YY~sP~GkkfRSk~eV~ryL~~ 73 (104)
|-..-||+.|.+...|.+.+..
T Consensus 8 ~~C~~C~k~f~~~~~L~~H~~~ 29 (35)
T 2elx_A 8 YVCALCLKKFVSSIRLRSHIRE 29 (35)
T ss_dssp EECSSSCCEESSHHHHHHHHHH
T ss_pred eECCCCcchhCCHHHHHHHHHH
Confidence 4445599999999999988653
No 63
>3hx8_A MLR2180 protein, putative ketosteroid isomerase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative; HET: MSE UNL PG4; 1.45A {Mesorhizobium loti}
Probab=27.79 E-value=61 Score=19.55 Aligned_cols=25 Identities=16% Similarity=0.313 Sum_probs=21.5
Q ss_pred eeEEEEcCCCceeccHHHHHHHHhC
Q psy3970 49 VDVFYYSPCGKKLRTRSEVLQVIRG 73 (104)
Q Consensus 49 ~DVYY~sP~GkkfRSk~eV~ryL~~ 73 (104)
-|+.++.|.|..++.+.+|..|+..
T Consensus 33 ~Da~~~~~~~~~~~G~~~i~~~~~~ 57 (129)
T 3hx8_A 33 DDAAAFPPDMARVDGRQNIQKLWQG 57 (129)
T ss_dssp EEEEEECTTSCCEESHHHHHHHHHH
T ss_pred CCeEEeCCCCCcccCHHHHHHHHHH
Confidence 4788888988899999999998864
No 64
>3bam_A R. bamhi, protein (restriction endonuclease bamhi); hydrolase, phosphodiesterase, complex (endonuclease/DNA), protein/DNA; HET: DNA; 1.80A {Bacillus amyloliquefaciens} SCOP: c.52.1.3 PDB: 1bhm_A* 1bam_A* 2bam_A* 1esg_A*
Probab=27.63 E-value=33 Score=26.03 Aligned_cols=31 Identities=26% Similarity=0.322 Sum_probs=23.3
Q ss_pred CCcEEEEEEcc---CCCCCCceeEEEEcC---CCcee
Q psy3970 31 PGWYREEVTRN---KGLSVGKVDVFYYSP---CGKKL 61 (104)
Q Consensus 31 ~GW~Rev~~R~---~g~s~gk~DVYY~sP---~Gkkf 61 (104)
.||.+|..+|- .-...|..|+||.-- .|++|
T Consensus 72 ~GW~LE~~LdI~~~a~kkPGPIDA~k~i~~~~~~~~~ 108 (213)
T 3bam_A 72 YNWYREKPLDILKLEKKKGGPIDVYKEFIENSELKRV 108 (213)
T ss_dssp TCCEEEECCHHHHTTSCCCCCEEEEEEEEETTEEEEE
T ss_pred cCceeeeeeccccccccCCCCceEEEEcccccCCceE
Confidence 39999999997 334569999999762 36655
No 65
>1o6w_A PRP40, PRE-mRNA processing protein PRP40; WW domain PAIR, nuclear protein, mRNA splicing, ribonucleoprotein; NMR {Saccharomyces cerevisiae} SCOP: b.72.1.1 b.72.1.1
Probab=27.00 E-value=27 Score=21.06 Aligned_cols=22 Identities=27% Similarity=0.658 Sum_probs=14.1
Q ss_pred CCCCCcEEEEEEccCCCCCCceeEEEEcCC
Q psy3970 28 QLPPGWYREEVTRNKGLSVGKVDVFYYSPC 57 (104)
Q Consensus 28 ~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP~ 57 (104)
.||.||.... -. .+-+|||+..
T Consensus 40 ~lp~gW~~~~--~~------~Gr~Yy~n~~ 61 (75)
T 1o6w_A 40 LRENGWKAAK--TA------DGKVYYYNPT 61 (75)
T ss_dssp HHHHTCEEEE--CT------TCCEEEEETT
T ss_pred CCCCeEEEEE--CC------CCCEEEEECC
Confidence 4789995442 12 3458999884
No 66
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1
Probab=24.99 E-value=38 Score=15.46 Aligned_cols=18 Identities=11% Similarity=0.381 Sum_probs=15.1
Q ss_pred CCCceeccHHHHHHHHhC
Q psy3970 56 PCGKKLRTRSEVLQVIRG 73 (104)
Q Consensus 56 P~GkkfRSk~eV~ryL~~ 73 (104)
-||+.|.+...|.+.+..
T Consensus 10 ~C~k~f~~~~~L~~H~~~ 27 (32)
T 1zfd_A 10 GCDKAFVRNHDLIRHKKS 27 (32)
T ss_dssp TCCCCBSSSHHHHHHHGG
T ss_pred CCCCccCCHHHHHHHHHH
Confidence 489999999999988753
No 67
>3tvt_B PINS, partner of inscuteable; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster}
Probab=24.92 E-value=36 Score=20.20 Aligned_cols=26 Identities=23% Similarity=0.479 Sum_probs=18.9
Q ss_pred EEEEEccCCCCCCceeEEEEcCCCceec
Q psy3970 35 REEVTRNKGLSVGKVDVFYYSPCGKKLR 62 (104)
Q Consensus 35 Rev~~R~~g~s~gk~DVYY~sP~GkkfR 62 (104)
|-+++|.. +..+.|..-+.|+||++.
T Consensus 18 rmvrvrrq--smeqldlikitpdgkrlq 43 (50)
T 3tvt_B 18 RMVRVRRQ--DMEQLDLIKITPDGKRMQ 43 (50)
T ss_pred eEEEeeec--chhhcCeEEecCCchhhh
Confidence 44555543 346899999999999874
No 68
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Probab=24.45 E-value=55 Score=14.22 Aligned_cols=18 Identities=17% Similarity=0.283 Sum_probs=15.1
Q ss_pred cCCCceeccHHHHHHHHh
Q psy3970 55 SPCGKKLRTRSEVLQVIR 72 (104)
Q Consensus 55 sP~GkkfRSk~eV~ryL~ 72 (104)
.-+|+.|.+...+...+.
T Consensus 6 ~~C~k~f~~~~~l~~H~~ 23 (29)
T 1rik_A 6 PECPKRFMRSDHLTLHIL 23 (29)
T ss_dssp SSSSCEESCSHHHHHHHT
T ss_pred CCCCchhCCHHHHHHHHH
Confidence 448999999999988765
No 69
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=24.37 E-value=65 Score=15.05 Aligned_cols=21 Identities=19% Similarity=0.411 Sum_probs=16.3
Q ss_pred EEEcCCCceeccHHHHHHHHh
Q psy3970 52 FYYSPCGKKLRTRSEVLQVIR 72 (104)
Q Consensus 52 YY~sP~GkkfRSk~eV~ryL~ 72 (104)
|-..-||+.|.+...|.+.+.
T Consensus 10 ~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2els_A 10 FTCEYCNKVFKFKHSLQAHLR 30 (36)
T ss_dssp EECTTTCCEESSHHHHHHHHH
T ss_pred EECCCCCceeCCHHHHHHHHH
Confidence 334459999999999988764
No 70
>2ysi_A Transcription elongation regulator 1; Ca150, FBP28, WW domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.22.1.1
Probab=23.80 E-value=98 Score=16.86 Aligned_cols=22 Identities=18% Similarity=0.457 Sum_probs=14.3
Q ss_pred CCCCCCcEEEEEEccCCCCCCceeEEEEcC
Q psy3970 27 PQLPPGWYREEVTRNKGLSVGKVDVFYYSP 56 (104)
Q Consensus 27 p~Lp~GW~Rev~~R~~g~s~gk~DVYY~sP 56 (104)
.++|.+|.... ... +-+|||+.
T Consensus 6 ~~~~~~W~e~~--~~~------G~~YYyN~ 27 (40)
T 2ysi_A 6 SGTEEIWVENK--TPD------GKVYYYNA 27 (40)
T ss_dssp CCCCCSEEEEE--CTT------SCEEEEET
T ss_pred CCCCCCCEEEE--CCC------CCEEEEEC
Confidence 47899997532 333 34789876
No 71
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.79 E-value=36 Score=15.93 Aligned_cols=20 Identities=20% Similarity=0.416 Sum_probs=15.9
Q ss_pred EEcCCCceeccHHHHHHHHh
Q psy3970 53 YYSPCGKKLRTRSEVLQVIR 72 (104)
Q Consensus 53 Y~sP~GkkfRSk~eV~ryL~ 72 (104)
-..-||+.|.++..|.+.+.
T Consensus 11 ~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2elr_A 11 LCDMCGKKFKSKGTLKSHKL 30 (36)
T ss_dssp BCTTTCCBCSSHHHHHHHHH
T ss_pred ecCcCCCCcCchHHHHHHHH
Confidence 34459999999999988764
No 72
>1ohp_A Steroid delta-isomerase; inhibitor; HET: ESR; 1.53A {Pseudomonas testosteroni} SCOP: d.17.4.3 PDB: 1qjg_A* 8cho_A* 1ohs_A* 1ocv_A 1isk_A 3nuv_A* 1ogz_A* 3nhx_A* 3m8c_A* 3nxj_A* 3myt_A* 3mki_A 3mhe_A 1buq_A* 3nbr_A* 3t8u_A 3ov4_A* 3nm2_A
Probab=23.62 E-value=82 Score=18.53 Aligned_cols=26 Identities=8% Similarity=0.056 Sum_probs=21.7
Q ss_pred ceeEEEEcCC-CceeccHHHHHHHHhC
Q psy3970 48 KVDVFYYSPC-GKKLRTRSEVLQVIRG 73 (104)
Q Consensus 48 k~DVYY~sP~-GkkfRSk~eV~ryL~~ 73 (104)
.-|+.|.+|. |..++.+.++..|+..
T Consensus 31 a~D~~~~~~~~~~~~~G~~~i~~~~~~ 57 (125)
T 1ohp_A 31 ADDATVENPVGSEPRSGTAAIREFYAN 57 (125)
T ss_dssp EEEEEEESSTTSCCEESHHHHHHHHHH
T ss_pred CCCeEEECCCCCCCccCHHHHHHHHHH
Confidence 3578888884 6899999999999976
No 73
>3mso_A Steroid delta-isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.57A {Pseudomonas aeruginosa}
Probab=22.68 E-value=78 Score=20.86 Aligned_cols=26 Identities=19% Similarity=0.241 Sum_probs=22.7
Q ss_pred ceeEEEEcCC-CceeccHHHHHHHHhC
Q psy3970 48 KVDVFYYSPC-GKKLRTRSEVLQVIRG 73 (104)
Q Consensus 48 k~DVYY~sP~-GkkfRSk~eV~ryL~~ 73 (104)
.-|+.|.+|. +..++-+..|.+|+..
T Consensus 35 a~D~v~~~P~~~~~~~G~~~v~~~~~~ 61 (143)
T 3mso_A 35 HPDAVFRSPMAHKPYAGAPVVSMILNT 61 (143)
T ss_dssp EEEEEEECSSCSSCEESHHHHHHHHHH
T ss_pred CCCEEEECCCCCCCccCHHHHHHHHHH
Confidence 4699999995 6799999999999975
No 74
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.26 E-value=72 Score=14.76 Aligned_cols=21 Identities=10% Similarity=0.260 Sum_probs=16.5
Q ss_pred EEEcCCCceeccHHHHHHHHh
Q psy3970 52 FYYSPCGKKLRTRSEVLQVIR 72 (104)
Q Consensus 52 YY~sP~GkkfRSk~eV~ryL~ 72 (104)
|-..-||+.|.+...|.+.+.
T Consensus 10 ~~C~~C~k~f~~~~~l~~H~~ 30 (36)
T 2elt_A 10 YKCPQCSYASAIKANLNVHLR 30 (36)
T ss_dssp EECSSSSCEESSHHHHHHHHH
T ss_pred CCCCCCCcccCCHHHHHHHHH
Confidence 334459999999999988764
No 75
>3dxo_A Uncharacterized snoal-like protein; putative isomerase of the snoal-like family; HET: MSE PGE; 2.70A {Agrobacterium tumefaciens str} SCOP: d.17.4.19
Probab=22.13 E-value=73 Score=20.10 Aligned_cols=35 Identities=11% Similarity=0.115 Sum_probs=25.6
Q ss_pred ceeEEEEcCCCceeccHHHHHHHHhCCC-CCcceeee
Q psy3970 48 KVDVFYYSPCGKKLRTRSEVLQVIRGNI-PGVSFDFR 83 (104)
Q Consensus 48 k~DVYY~sP~GkkfRSk~eV~ryL~~~l-~~e~FdF~ 83 (104)
.-|+.|.+|-+. ++-+..|..|+..-. ...+|.|.
T Consensus 33 a~D~~~~dP~~~-~~G~~ai~~~~~~~~~~~~~~~f~ 68 (121)
T 3dxo_A 33 AENTRYVDPLMQ-GEGQQGIAAMIEAARQKFPGYRFV 68 (121)
T ss_dssp EEEEEEECSSCE-EEHHHHHHHHHHHHHHHSTTCEEE
T ss_pred CCCeEEECCCCC-cCCHHHHHHHHHHHHHHCCCcEEE
Confidence 459999999985 999999999987521 12345554
No 76
>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A
Probab=21.32 E-value=41 Score=14.62 Aligned_cols=18 Identities=17% Similarity=0.220 Sum_probs=14.5
Q ss_pred cCCCceeccHHHHHHHHh
Q psy3970 55 SPCGKKLRTRSEVLQVIR 72 (104)
Q Consensus 55 sP~GkkfRSk~eV~ryL~ 72 (104)
.-+|+.|.+...+...+.
T Consensus 6 ~~C~k~f~~~~~l~~H~~ 23 (30)
T 1klr_A 6 QYCEFRSADSSNLKTHIK 23 (30)
T ss_dssp SSSSCCCSCSHHHHHHHH
T ss_pred CCCCCccCCHHHHHHHHH
Confidence 348999999999888764
No 77
>1oh0_A Steroid delta-isomerase; ketosteroid isomerase, KSI, equilenin, PI, LBHB; HET: EQU; 1.1A {Pseudomonas putida} SCOP: d.17.4.3 PDB: 1e3v_A* 1opy_A 1dmq_A 1dmm_A 1ea2_A 3cpo_A 1e3r_A* 1ogx_A 2inx_A 2pzv_A 1c7h_A 1dmn_A 1k41_A 1oho_A* 3fzw_A* 1cqs_A* 1w00_A 1e97_A 1w6y_A* 3ipt_A* ...
Probab=21.22 E-value=86 Score=19.03 Aligned_cols=26 Identities=15% Similarity=0.185 Sum_probs=21.5
Q ss_pred ceeEEEEcCC-CceeccHHHHHHHHhC
Q psy3970 48 KVDVFYYSPC-GKKLRTRSEVLQVIRG 73 (104)
Q Consensus 48 k~DVYY~sP~-GkkfRSk~eV~ryL~~ 73 (104)
.-|+.|.+|. |..++.+.+|..|+..
T Consensus 33 a~D~~~~~p~~~~~~~G~~~i~~~~~~ 59 (131)
T 1oh0_A 33 ADDATVEDPFGQPPIHGREQIAAFYRQ 59 (131)
T ss_dssp EEEEEEESSTTSCCEEHHHHHHHHHHH
T ss_pred CCCEEEEcCCCCCCcccHHHHHHHHHH
Confidence 3588888885 4789999999999875
No 78
>3odh_A Okrai endonuclease; alpha and beta proteins (A/B), restriction endonuclease-like phosphodiesterase; HET: DNA; 2.30A {Oceanobacter kriegii}
Probab=20.78 E-value=1e+02 Score=23.01 Aligned_cols=30 Identities=30% Similarity=0.472 Sum_probs=23.1
Q ss_pred CCcEEEEEEccCC-CCCCceeEEEEcCCCcee
Q psy3970 31 PGWYREEVTRNKG-LSVGKVDVFYYSPCGKKL 61 (104)
Q Consensus 31 ~GW~Rev~~R~~g-~s~gk~DVYY~sP~Gkkf 61 (104)
.||.+|..++-.. .+.|..|+|+.= +|++|
T Consensus 66 ~~W~lE~~l~~~~~~~pGpiDa~k~~-~~~~~ 96 (194)
T 3odh_A 66 KGWALEHPVRIKAEMRPGPLDAVKMI-GGKAF 96 (194)
T ss_dssp TTCEEEECCCCSSSSCCCCEEEEEES-SSCEE
T ss_pred cCceeeeeeccccccCCCceeEEEEe-cCeEE
Confidence 8999999999733 345899999876 45555
No 79
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.68 E-value=91 Score=15.48 Aligned_cols=21 Identities=19% Similarity=0.407 Sum_probs=17.3
Q ss_pred EcCCCceeccHHHHHHHHhCC
Q psy3970 54 YSPCGKKLRTRSEVLQVIRGN 74 (104)
Q Consensus 54 ~sP~GkkfRSk~eV~ryL~~~ 74 (104)
..-+|+.|.++..|.+.+...
T Consensus 15 C~~C~k~f~~~~~L~~H~~~H 35 (46)
T 2emg_A 15 CSECGKVFTHKTNLIIHQKIH 35 (46)
T ss_dssp CTTTCCBCSSHHHHHHHHTTT
T ss_pred CCccCcccCCHHHHHHHHHHh
Confidence 344899999999999998654
No 80
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.63 E-value=89 Score=15.22 Aligned_cols=20 Identities=30% Similarity=0.610 Sum_probs=16.6
Q ss_pred cCCCceeccHHHHHHHHhCC
Q psy3970 55 SPCGKKLRTRSEVLQVIRGN 74 (104)
Q Consensus 55 sP~GkkfRSk~eV~ryL~~~ 74 (104)
.-+|+.|.+...|.+.+...
T Consensus 16 ~~C~k~f~~~~~L~~H~~~H 35 (44)
T 2en7_A 16 NECGKAFRSKSYLIIHTRTH 35 (44)
T ss_dssp TTTCCCCSSHHHHHHHHTTT
T ss_pred CCCCCccCCHHHHHHHhhhc
Confidence 34899999999999988653
No 81
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Probab=20.10 E-value=96 Score=15.38 Aligned_cols=20 Identities=20% Similarity=0.353 Sum_probs=16.8
Q ss_pred cCCCceeccHHHHHHHHhCC
Q psy3970 55 SPCGKKLRTRSEVLQVIRGN 74 (104)
Q Consensus 55 sP~GkkfRSk~eV~ryL~~~ 74 (104)
.-+|+.|.++..|.+.+...
T Consensus 16 ~~C~k~F~~~~~L~~H~~~H 35 (46)
T 2enf_A 16 NECGKVFTQNSHLVRHRGIH 35 (46)
T ss_dssp SSSCCBCSSHHHHHHHHTTT
T ss_pred CCCCcccCCHHHHHHHHHhh
Confidence 44999999999999998654
No 82
>2bng_A MB2760; epoxide hydrolase, limonene, hydrolase, structural proteomics in europe, spine, structural genomics; 2.5A {Mycobacterium tuberculosis} SCOP: d.17.4.8
Probab=20.01 E-value=1.3e+02 Score=19.11 Aligned_cols=26 Identities=15% Similarity=0.181 Sum_probs=22.0
Q ss_pred eeEEEEcCCCceeccHHHHHHHHhCC
Q psy3970 49 VDVFYYSPCGKKLRTRSEVLQVIRGN 74 (104)
Q Consensus 49 ~DVYY~sP~GkkfRSk~eV~ryL~~~ 74 (104)
-|+.+.+|.+..++.+.+|..|+..-
T Consensus 42 ~D~v~~~~~~~~~~G~~~i~~~~~~~ 67 (149)
T 2bng_A 42 DDLVYENVGFSRIRGGRRTATLLRRM 67 (149)
T ss_dssp EEEEEEETTTEEEECHHHHHHHHHTT
T ss_pred CCEEEEeCCCCCccCHHHHHHHHHHH
Confidence 47888878778899999999999874
Done!