RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy3973
         (285 letters)



>d1txka2 b.30.5.9 (A:23-396) Glucans biosynthesis protein G (MdoG,
           OpgG), N-terminal domain {Escherichia coli [TaxId: 562]}
          Length = 374

 Score = 26.2 bits (58), Expect = 4.5
 Identities = 5/27 (18%), Positives = 11/27 (40%)

Query: 227 WVAARARRKHNGPYKEPEGAVGENAAN 253
            VA +A+      Y+ P+  +     +
Sbjct: 5   DVAKQAQSLAGKGYETPKSNLPSVFRD 31


>d1krqa_ a.25.1.1 (A:) Non-hem ferritin {Campylobacter jejuni
          [TaxId: 197]}
          Length = 165

 Score = 25.7 bits (56), Expect = 5.8
 Identities = 7/43 (16%), Positives = 13/43 (30%)

Query: 1  MYYVMRKYCNRSKFSKSADQELETAELSLSHCQPLYSYSTNRT 43
          +Y  M  +C  +    +       A     H + L +Y     
Sbjct: 23 LYLSMSSWCYENSLDGAGAFLFAHASEESDHAKKLITYLNETD 65


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.321    0.137    0.412 

Gapped
Lambda     K      H
   0.267   0.0651    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,013,839
Number of extensions: 44750
Number of successful extensions: 104
Number of sequences better than 10.0: 1
Number of HSP's gapped: 104
Number of HSP's successfully gapped: 3
Length of query: 285
Length of database: 2,407,596
Length adjustment: 84
Effective length of query: 201
Effective length of database: 1,254,276
Effective search space: 252109476
Effective search space used: 252109476
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.0 bits)