Query psy3977
Match_columns 99
No_of_seqs 95 out of 97
Neff 4.8
Searched_HMMs 13730
Date Fri Aug 16 22:08:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3977.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/3977hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1rh6a_ a.6.1.7 (A:) Excisiona 20.1 13 0.00095 20.8 0.5 14 12-25 32-45 (55)
2 d1dlca1 b.18.1.3 (A:500-644) d 12.7 29 0.0021 22.0 0.8 15 11-25 12-30 (145)
3 d1ji6a1 b.18.1.3 (A:503-652) d 12.4 31 0.0023 22.0 0.9 16 10-25 11-30 (150)
4 d2c4ja2 c.47.1.5 (A:2-85) Clas 11.6 52 0.0038 17.9 1.7 19 6-24 49-71 (84)
5 d1ciya1 b.18.1.3 (A:462-609) d 11.1 35 0.0026 21.7 0.8 14 12-25 12-29 (148)
6 d1feua_ b.53.1.1 (A:) Ribosoma 10.1 29 0.0021 22.8 0.1 13 10-22 106-118 (185)
7 d2zjrs1 b.53.1.1 (S:1-175) Rib 9.9 45 0.0032 21.7 1.0 18 9-26 101-118 (175)
8 d1w23a_ c.67.1.4 (A:) Phosphos 9.1 55 0.004 21.6 1.2 14 8-24 324-337 (360)
9 d2dgxa1 d.58.7.1 (A:563-635) L 8.7 46 0.0033 19.4 0.6 8 16-23 59-66 (73)
10 d1cd9b1 b.1.2.1 (B:1-107) Gran 8.0 55 0.004 18.0 0.7 6 9-14 1-6 (107)
No 1
>d1rh6a_ a.6.1.7 (A:) Excisionase Xis {Bacteriophage lambda [TaxId: 10710]}
Probab=20.08 E-value=13 Score=20.83 Aligned_cols=14 Identities=29% Similarity=0.442 Sum_probs=11.1
Q ss_pred CcccccCceeeccc
Q psy3977 12 APAVKAGGMRITQH 25 (99)
Q Consensus 12 pPAvKAGGmRI~~k 25 (99)
|||+|.|+.=.++.
T Consensus 32 P~p~K~Gr~w~V~~ 45 (55)
T d1rh6a_ 32 PPPVKDGREYLFHE 45 (55)
T ss_dssp SCCEEETTEEEEET
T ss_pred CCchhcCceEEECC
Confidence 89999998766654
No 2
>d1dlca1 b.18.1.3 (A:500-644) delta-Endotoxin, C-terminal domain {Bacillus thuringiensis tenebrionis, CRYIIIA (BT13) [TaxId: 1444]}
Probab=12.67 E-value=29 Score=22.03 Aligned_cols=15 Identities=33% Similarity=0.512 Sum_probs=9.9
Q ss_pred CCccccc----Cceeeccc
Q psy3977 11 HAPAVKA----GGMRITQH 25 (99)
Q Consensus 11 HpPAvKA----GGmRI~~k 25 (99)
.=||||| ||-.|++-
T Consensus 12 QIPaVKa~~l~~~~~VikG 30 (145)
T d1dlca1 12 QLPLVKAYKLQSGASVVAG 30 (145)
T ss_dssp EEEGGGCSEECTTCEEECC
T ss_pred EeceEEEeEcCCCCEEEEC
Confidence 3499998 45566644
No 3
>d1ji6a1 b.18.1.3 (A:503-652) delta-Endotoxin, C-terminal domain {Bacillus thuringiensis, CRY3bb1 [TaxId: 1428]}
Probab=12.42 E-value=31 Score=21.96 Aligned_cols=16 Identities=38% Similarity=0.530 Sum_probs=10.9
Q ss_pred CCCccccc----Cceeeccc
Q psy3977 10 GHAPAVKA----GGMRITQH 25 (99)
Q Consensus 10 GHpPAvKA----GGmRI~~k 25 (99)
..=||||| +|-.|++-
T Consensus 11 TQIPaVKa~~l~~~~~VvkG 30 (150)
T d1ji6a1 11 TQLPVVKAYALSSGASIIEG 30 (150)
T ss_dssp EEEEGGGCSEECTTEEEECC
T ss_pred eeEceEEEeEcCCCcEEEEC
Confidence 34599998 56677653
No 4
>d2c4ja2 c.47.1.5 (A:2-85) Class mu GST {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.60 E-value=52 Score=17.94 Aligned_cols=19 Identities=37% Similarity=0.480 Sum_probs=14.4
Q ss_pred ccccCCC----cccccCceeecc
Q psy3977 6 ELKGGHA----PAVKAGGMRITQ 24 (99)
Q Consensus 6 elKaGHp----PAvKAGGmRI~~ 24 (99)
+.+++.| |++..||..|.+
T Consensus 49 ~~~~~~p~~~lP~L~~~g~~l~e 71 (84)
T d2c4ja2 49 KFKLGLDFPNLPYLIDGTHKITQ 71 (84)
T ss_dssp TTSSCCSSCCSSEEEETTEEEES
T ss_pred hhhccCCCCCCCEEEECCEEEec
Confidence 3455555 999999998876
No 5
>d1ciya1 b.18.1.3 (A:462-609) delta-Endotoxin, C-terminal domain {Bacillus thuringiensis, CRYIA (A) [TaxId: 1428]}
Probab=11.12 E-value=35 Score=21.66 Aligned_cols=14 Identities=21% Similarity=0.460 Sum_probs=9.4
Q ss_pred Cccccc----Cceeeccc
Q psy3977 12 APAVKA----GGMRITQH 25 (99)
Q Consensus 12 pPAvKA----GGmRI~~k 25 (99)
=||||| +|-.|++-
T Consensus 12 IPAVKa~~l~~~~~VvkG 29 (148)
T d1ciya1 12 IPLTKSTNLGSGTSVVKG 29 (148)
T ss_dssp EEGGGCSEECTTCEEECC
T ss_pred EEEEEEeEcCCCcEEEEC
Confidence 499998 35566653
No 6
>d1feua_ b.53.1.1 (A:) Ribosomal protein TL5 (general stress protein CTC) {Thermus thermophilus [TaxId: 274]}
Probab=10.14 E-value=29 Score=22.84 Aligned_cols=13 Identities=38% Similarity=0.682 Sum_probs=10.8
Q ss_pred CCCcccccCceee
Q psy3977 10 GHAPAVKAGGMRI 22 (99)
Q Consensus 10 GHpPAvKAGGmRI 22 (99)
|.+|+||.||.--
T Consensus 106 G~~~gvk~GG~l~ 118 (185)
T d1feua_ 106 GTPAGVRAGGVLQ 118 (185)
T ss_dssp SCCHHHHTTCEEE
T ss_pred ecccccccccEEE
Confidence 7899999999643
No 7
>d2zjrs1 b.53.1.1 (S:1-175) Ribosomal protein TL5 (general stress protein CTC) {Deinococcus radiodurans [TaxId: 1299]}
Probab=9.93 E-value=45 Score=21.67 Aligned_cols=18 Identities=17% Similarity=0.195 Sum_probs=13.4
Q ss_pred cCCCcccccCceeecccc
Q psy3977 9 GGHAPAVKAGGMRITQHK 26 (99)
Q Consensus 9 aGHpPAvKAGGmRI~~k~ 26 (99)
-|.+|+||.||+--...+
T Consensus 101 ~G~~~gvk~Gg~l~~~~~ 118 (175)
T d2zjrs1 101 TGRSQGEVQGGLVDIVVH 118 (175)
T ss_dssp ESCCTTTTTTSEEECSCS
T ss_pred ecccccccccceeeeeeh
Confidence 478999999998644443
No 8
>d1w23a_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Bacillus alcalophilus [TaxId: 1445]}
Probab=9.09 E-value=55 Score=21.62 Aligned_cols=14 Identities=36% Similarity=0.627 Sum_probs=10.6
Q ss_pred ccCCCcccccCceeecc
Q psy3977 8 KGGHAPAVKAGGMRITQ 24 (99)
Q Consensus 8 KaGHpPAvKAGGmRI~~ 24 (99)
-.||. ++||.||+-
T Consensus 324 ~~G~~---~~ggiRiS~ 337 (360)
T d1w23a_ 324 LNGHR---SVGGCRASI 337 (360)
T ss_dssp CBCCT---TTCSEEEEC
T ss_pred eeCCC---ccCcEEEEe
Confidence 35785 679999973
No 9
>d2dgxa1 d.58.7.1 (A:563-635) Limkain-b1, LKAP {Human (Homo sapiens) [TaxId: 9606]}
Probab=8.68 E-value=46 Score=19.44 Aligned_cols=8 Identities=38% Similarity=0.559 Sum_probs=6.5
Q ss_pred ccCceeec
Q psy3977 16 KAGGMRIT 23 (99)
Q Consensus 16 KAGGmRI~ 23 (99)
|.|++||.
T Consensus 59 KiG~KRI~ 66 (73)
T d2dgxa1 59 KIGSKKIL 66 (73)
T ss_dssp EETTEEEE
T ss_pred hcCCeEEE
Confidence 78999984
No 10
>d1cd9b1 b.1.2.1 (B:1-107) Granulocyte colony-stimulating factor (GC-SF) receptor {Mouse (Mus musculus) [TaxId: 10090]}
Probab=7.97 E-value=55 Score=17.98 Aligned_cols=6 Identities=50% Similarity=0.844 Sum_probs=3.6
Q ss_pred cCCCcc
Q psy3977 9 GGHAPA 14 (99)
Q Consensus 9 aGHpPA 14 (99)
||+||.
T Consensus 1 ~G~PP~ 6 (107)
T d1cd9b1 1 AGYPPA 6 (107)
T ss_dssp CCCCCC
T ss_pred CCCccC
Confidence 566664
Done!