BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3979
(286 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|332029751|gb|EGI69620.1| Endoribonuclease Dcr-1 [Acromyrmex echinatior]
Length = 1257
Score = 207 bits (526), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 115/243 (47%), Positives = 157/243 (64%), Gaps = 26/243 (10%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L DK VAD VE+L GVYL++ I+GA L+ ILP KID+ L G S + P
Sbjct: 936 LSDKTVADSVEALIGVYLKNNHIKGAAKLLKWFGILPDVKIDM---LLG---SISQNPVI 989
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
G DP Y+P LE +I Y F++++FLLQA +HP+Y AN IT YQRLEFLGDAI+D
Sbjct: 990 GVG-DPNYYMPWADTLESKIGYKFKNRAFLLQAFTHPSYTANGITECYQRLEFLGDAILD 1048
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
FL+T Y+YEN +LSPG+++D+RSA+VNN+TFA +VR LH LL +P+L+E + F
Sbjct: 1049 FLITCYIYENDVNLSPGDLTDLRSALVNNITFACLSVRHGLHTALLAYAPKLHEIIDCFV 1108
Query: 221 QNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFE 280
+ QE R++ ++DE L++ LIEE + + EYVDVPK LGD+FE
Sbjct: 1109 RFQEERDYVVNDE-------------LLYVLIEEDECN------ITEYVDVPKVLGDLFE 1149
Query: 281 ALV 283
+L+
Sbjct: 1150 SLI 1152
Score = 38.5 bits (88), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 27/41 (65%)
Query: 149 QRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
+RLE LGD+ + F+V+ +LY F + G+++ ++ M+ N
Sbjct: 796 ERLETLGDSYLKFIVSLFLYHKFPTFNEGQLTALKGKMIGN 836
>gi|380026731|ref|XP_003697097.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer-like [Apis
florea]
Length = 1362
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/243 (43%), Positives = 159/243 (65%), Gaps = 25/243 (10%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+ DK VAD VE+L GVYLR+ GI+ + L+ ILP ++ID + L+G + P
Sbjct: 1093 VSDKAVADCVEALIGVYLRNMGIKDTLTLLKWFQILP-NEIDSNTLLFGTSEN----PII 1147
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
++G D +P +++E ++ Y F+++ +LLQA +HP+Y+AN +T YQRLEFLGDAI+D
Sbjct: 1148 SKG-DINSLMPWASEIETKLGYKFKNRGYLLQAFTHPSYSANHMTECYQRLEFLGDAILD 1206
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
FL+T+Y+YEN +L+PG ++D+RSA+VNN+TFA VR LH LL SP+L + + RF
Sbjct: 1207 FLITSYIYENCGNLNPGSLTDLRSALVNNITFACLTVRHGLHIALLCYSPKLNDIIERFV 1266
Query: 221 QNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFE 280
+ QE RNH ++DE L++ L+EE + + E+VDVPK LGD+FE
Sbjct: 1267 KFQEERNHIVNDE-------------LLWILLEESECN------IAEHVDVPKVLGDIFE 1307
Query: 281 ALV 283
+++
Sbjct: 1308 SII 1310
>gi|307169911|gb|EFN62420.1| Endoribonuclease Dcr-1 [Camponotus floridanus]
Length = 506
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 110/243 (45%), Positives = 148/243 (60%), Gaps = 26/243 (10%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L DK +AD VE+L GVYL+S GI+GA L+ ILP +ID E LY P + P
Sbjct: 186 LSDKTIADSVEALIGVYLKSNGIKGAAKLLKWFGILPNIQID--ELLYSNPPDPLINPG- 242
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
+P Y+P +E +I Y F +++FLLQA +HP+Y N IT YQRLEFLGDAI+D
Sbjct: 243 ----NPNSYMPWANDMETKIGYKFNNRAFLLQAFTHPSYTPNVITECYQRLEFLGDAILD 298
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
FL+T Y+YE +LSPG ++D+RSA+VNN+TFA AVR L LL +P+L+E + RF
Sbjct: 299 FLITCYIYETCGNLSPGHLTDLRSALVNNITFACLAVRYGLDTALLSYAPKLHEAIDRFV 358
Query: 221 QNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFE 280
+ Q+ RN+ ++DE EE C + EYVDVPK LGD+FE
Sbjct: 359 KFQQERNYVVNDELLWVLLEE--EEC-----------------NLAEYVDVPKVLGDLFE 399
Query: 281 ALV 283
+L+
Sbjct: 400 SLI 402
>gi|307198394|gb|EFN79336.1| Endoribonuclease dcr-1 [Harpegnathos saltator]
Length = 1479
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/243 (44%), Positives = 151/243 (62%), Gaps = 25/243 (10%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+ DK ++D +E+L GVYLR+ GI GA L+ ILP KID E L G + S P
Sbjct: 1210 ISDKAISDSIEALIGVYLRNTGISGAAKLLKWFGILPDIKID--ELLNGTNSSN---PII 1264
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
G +P ++P +EKR+ Y F ++++LLQA +HP+Y+ NRIT YQRLEFLGDA++D
Sbjct: 1265 GIG-NPNEHMPWADSIEKRLGYKFNNRAYLLQAFTHPSYSVNRITDCYQRLEFLGDAVLD 1323
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
FL+T ++YE +LSPG ++D+RSA+VNN+TFA AVR LH LL +P+L+E + RF
Sbjct: 1324 FLITCHIYEFCGNLSPGALTDLRSALVNNITFACLAVRYGLHTCLLAYAPQLHEMINRFV 1383
Query: 221 QNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFE 280
+ QE RN+ I+DE EE C + EY+DVPK LGD+FE
Sbjct: 1384 KFQEDRNYAINDELLWVLLEE--EDC-----------------NIAEYIDVPKVLGDLFE 1424
Query: 281 ALV 283
L+
Sbjct: 1425 TLI 1427
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 36/64 (56%), Gaps = 11/64 (17%)
Query: 130 LLQALS----HPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSA 185
+LQAL+ H +N +RLE LGD+ + F+ + +LY F LS G+++ I+
Sbjct: 1054 ILQALTTKMCHDMFNL-------ERLETLGDSYLKFITSLFLYHTFPMLSEGQLTAIKGR 1106
Query: 186 MVNN 189
++ N
Sbjct: 1107 IIGN 1110
>gi|340712553|ref|XP_003394821.1| PREDICTED: endoribonuclease Dicer-like [Bombus terrestris]
Length = 1488
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/243 (42%), Positives = 151/243 (62%), Gaps = 25/243 (10%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+ DK VAD VE+L GVYLRS GI+ ++ LQ ILP KID +E L+G + +
Sbjct: 1167 VSDKTVADCVEALIGVYLRSMGIKDTLILLQWFQILPH-KIDANELLFGTPQNPIISEGN 1225
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
L +P + +E ++ Y F ++ +LLQA +HP+Y N +T YQRLEFLGDAI+D
Sbjct: 1226 VNHL-----MPWASNIETKLGYQFNNRGYLLQAFTHPSYTPNNMTECYQRLEFLGDAILD 1280
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
FL+T Y+YE+ +L+PG ++D+RSA+VNN+TFA VR LH LL +P+L + RF
Sbjct: 1281 FLITNYIYESCGNLNPGALTDLRSALVNNITFACLTVRHGLHIALLSYAPKLNNVIERFV 1340
Query: 221 QNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFE 280
+ QE RN+ ++DE L++ L+EE + + E+VDVPK LGD+FE
Sbjct: 1341 KFQEERNYAVNDE-------------LLWILLEEDECN------MAEHVDVPKVLGDIFE 1381
Query: 281 ALV 283
+++
Sbjct: 1382 SVI 1384
>gi|350399948|ref|XP_003485689.1| PREDICTED: endoribonuclease Dicer-like [Bombus impatiens]
Length = 1490
Score = 196 bits (498), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 103/243 (42%), Positives = 151/243 (62%), Gaps = 25/243 (10%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+ DK VAD VE+L GVYLRS GI+ ++ LQ ILP KID +E L+G + +
Sbjct: 1169 VSDKTVADCVEALIGVYLRSMGIKDTLILLQWFQILPY-KIDANELLFGTPQNPIISEGN 1227
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
L +P + +E ++ Y F ++ +LLQA +HP+Y N +T YQRLEFLGDAI+D
Sbjct: 1228 INHL-----MPWASNIETKLGYRFNNRGYLLQAFTHPSYTPNNMTECYQRLEFLGDAILD 1282
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
FL+T Y+YE+ +L+PG ++D+RSA+VNN+TFA VR LH LL +P+L + RF
Sbjct: 1283 FLITNYIYESCGNLNPGALTDLRSALVNNITFACLTVRHGLHIALLSYAPKLNNIIERFV 1342
Query: 221 QNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFE 280
+ QE RN+ ++DE L++ L+EE + + E+VDVPK LGD+FE
Sbjct: 1343 KFQEERNYAVNDE-------------LLWILLEEDECN------MAEHVDVPKVLGDIFE 1383
Query: 281 ALV 283
+++
Sbjct: 1384 SVI 1386
>gi|406034947|emb|CCF23094.1| Dicer 2 [Blattella germanica]
Length = 1649
Score = 195 bits (495), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/257 (42%), Positives = 150/257 (58%), Gaps = 26/257 (10%)
Query: 30 SSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYG 89
SS NFL + DK +AD VE+L G YL+ GI GA+ L L ILP + AL
Sbjct: 1310 SSMENFLAVRAVADKTIADGVEALIGAYLKGSGIRGALRLLTWLKILPSEALP--GALLD 1367
Query: 90 PHPSA----VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRIT 145
P +R Q + L I EC +E + YTF+D+S+LLQAL+H +Y NR+T
Sbjct: 1368 TQPPTADVKMRDHNQPGDIYVLLSIHECMAIENILQYTFKDRSYLLQALTHASYTPNRVT 1427
Query: 146 TSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
YQRLEFLGDAI+DFL+T ++YE+ L+PGE++D+RS++VNNVTFAS VR HK +
Sbjct: 1428 ECYQRLEFLGDAILDFLITCHIYESCGELTPGELTDLRSSLVNNVTFASLTVRYGFHKFM 1487
Query: 206 LHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRV 265
+ S RL + V RF + QE H I++E + L+EE + +
Sbjct: 1488 KYTSTRLMDMVDRFVKFQEDNGHSINEE--------------VLILLEETETN------I 1527
Query: 266 VEYVDVPKALGDVFEAL 282
E +DVPK LGD+FE++
Sbjct: 1528 AEAIDVPKVLGDLFESI 1544
>gi|167234451|ref|NP_001107840.1| Dicer-2 [Tribolium castaneum]
gi|270002830|gb|EEZ99277.1| hypothetical protein TcasGA2_TC001108 [Tribolium castaneum]
Length = 1623
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 102/249 (40%), Positives = 157/249 (63%), Gaps = 22/249 (8%)
Query: 34 NFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPS 93
NFL++ +GDK +AD VE+L G Y S GI+G + F++ + ILP S+ + +
Sbjct: 1294 NFLNKQYVGDKSIADSVEALLGAYFLSGGIQGGIKFMEWIGILPLSE-QIQRLIETTQVD 1352
Query: 94 AVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEF 153
V +++ D ++P+ ++E+R+ YTF +++FLLQAL+H +Y+ NRIT SY+RLEF
Sbjct: 1353 PV-LNKKSTKTDVDFHMPQWREIEQRLGYTFTNRAFLLQALTHSSYSPNRITLSYERLEF 1411
Query: 154 LGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLY 213
LGDA++DFL+T Y++E+ HL PG+++D+RS++VNN TFAS VR HK LL + L
Sbjct: 1412 LGDAVLDFLITCYIFEHCGHLEPGQVTDLRSSLVNNNTFASLVVRCGFHKFLLMMNSNLQ 1471
Query: 214 ENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPK 273
++ +FA ++N+ I DE + L+EE ++ + EYVDVPK
Sbjct: 1472 GHIDKFADYLASKNYVIDDE--------------VLILLEEDEMN------IAEYVDVPK 1511
Query: 274 ALGDVFEAL 282
LGD+FEAL
Sbjct: 1512 VLGDIFEAL 1520
>gi|383856609|ref|XP_003703800.1| PREDICTED: endoribonuclease Dicer-like [Megachile rotundata]
Length = 1441
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 101/241 (41%), Positives = 152/241 (63%), Gaps = 26/241 (10%)
Query: 43 DKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQAR 102
DK VAD VE+L GVYL + GI+ A+ L+ ILP ++ D H L+ + V E
Sbjct: 1175 DKTVADCVEALIGVYLENLGIKNAITLLKWFQILP-NETDAHRLLHDISENIV-VDENIN 1232
Query: 103 GLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFL 162
R++P + +E ++ Y F++++ LLQA +HP+Y AN +T YQRLEFLGDAI+DFL
Sbjct: 1233 -----RFMPWASDIETKLGYRFENRALLLQAFTHPSYTANNVTECYQRLEFLGDAILDFL 1287
Query: 163 VTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQN 222
+T Y+YEN +L+PG ++D+RSA+VNN+TFA +VR LH LL +P L + + RF +
Sbjct: 1288 ITCYIYENCGNLTPGALTDLRSALVNNITFACLSVRYGLHTALLAYAPNLNDVIHRFVKF 1347
Query: 223 QEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEAL 282
QE R+H ++DE L++ L+EE + + E+VDVPK LGD++E++
Sbjct: 1348 QEERDHIVNDE-------------LLWILLEEDECN------MAEHVDVPKVLGDLYESV 1388
Query: 283 V 283
+
Sbjct: 1389 I 1389
Score = 37.4 bits (85), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 27/41 (65%)
Query: 149 QRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
+RLE LGD+ + F+V+ YLY F + + G ++ ++ M+ N
Sbjct: 1033 ERLETLGDSYLKFIVSLYLYTIFPNYNEGSLTVLKGKMIGN 1073
>gi|345494561|ref|XP_001602524.2| PREDICTED: endoribonuclease Dicer [Nasonia vitripennis]
Length = 1450
Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 116/283 (40%), Positives = 171/283 (60%), Gaps = 33/283 (11%)
Query: 4 LSNLDFDLYQDPTEDGKKVSSP--EKLPSSSY-NFLDRIKLGDKVVADVVESLTGVYLRS 60
+SN D+ QD K ++ P EK+ + +FL + DK V+D E+L G YL
Sbjct: 1146 ISNNTTDMMQD-----KVLAWPSDEKVTHTGMEHFLGIQVVSDKSVSDCTEALIGTYLLH 1200
Query: 61 CGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRI 120
GI+GA+ L+ ILP+S ++V + LY S V P+ G D +IP +E+R+
Sbjct: 1201 LGIKGALQILKWFEILPKS-LNVDQYLY----SEVENPQLGDG-DVNVHIPWAQTMEERL 1254
Query: 121 NYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEIS 180
Y F++++FLLQA +HP+Y NR T SYQRLEFLGDA++DFL+T ++YE +LSPGE++
Sbjct: 1255 GYKFRNRAFLLQAFTHPSYMPNRQTASYQRLEFLGDAVLDFLLTIHIYETCGNLSPGELT 1314
Query: 181 DIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEE 240
D+RSA+VNN+TFA AVR LH LL +P+L++ + +F + QE RN++I DE E
Sbjct: 1315 DLRSALVNNITFACLAVRYGLHTALLALAPKLFDLIDKFVKFQENRNYKIDDELLWVLLE 1374
Query: 241 EGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
E C + E+VDVPK LGD++E+++
Sbjct: 1375 E--EEC-----------------NMAEHVDVPKVLGDIYESVI 1398
>gi|328696732|ref|XP_001945890.2| PREDICTED: endoribonuclease dcr-1-like isoform 1 [Acyrthosiphon
pisum]
Length = 1691
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/267 (42%), Positives = 156/267 (58%), Gaps = 33/267 (12%)
Query: 17 EDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNIL 76
EDG P+ S S FL + + DK+VAD VESL G Y+ G+E LQ L I+
Sbjct: 1350 EDG----IPQIGHSQSDLFLHKQSVSDKMVADCVESLIGTYVYKRGVEVGFKVLQGLGII 1405
Query: 77 PQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSH 136
P+ ID + P P + GLD + +P LE+RI Y+F+ K L QAL+H
Sbjct: 1406 PKQFIDT----FKPKP----IDDLYDGLDFSKILPGYELLERRIGYSFKHKHLLAQALTH 1457
Query: 137 PTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYA 196
PTY + YQRLEFLGDAI+DFL+T Y+ E+ H +PGEI+DIRS++VNN+TFAS +
Sbjct: 1458 PTYQFG-FSECYQRLEFLGDAILDFLITTYIIEHCYHKTPGEITDIRSSLVNNITFASLS 1516
Query: 197 VRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKD 256
R+ LH+ +L S ++ E + RF ++Q+ NH+I E + +LIEE
Sbjct: 1517 ARIGLHRFILAKSVQMTEAIDRFYEHQQKNNHKIGQE--------------VLYLIEE-- 1560
Query: 257 VQTDVYGRVVEYVDVPKALGDVFEALV 283
+D Y E VDVPK LGD+FE+L+
Sbjct: 1561 --SDCYA--AESVDVPKVLGDLFESLI 1583
>gi|425626934|gb|AFX89025.1| DCR2 [Mayetiola destructor]
Length = 1646
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/256 (40%), Positives = 156/256 (60%), Gaps = 22/256 (8%)
Query: 30 SSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSK-IDVHEALY 88
S N L ++ DK +D VE++ G L S G++ L+ NILP+ + +D+ + L
Sbjct: 1311 GSMQNVLGLQRIADKTSSDCVEAILGACLVSIGVDRTFKVLEMFNILPKRENVDITKLLS 1370
Query: 89 GP-HPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTS 147
H VR + +D ++P T+LE I Y F+D+++LLQAL+HPTY NR+T
Sbjct: 1371 NQFHNPRVRTNIKDIEID--SFLPNHTELETNIGYKFKDRAYLLQALTHPTYPTNRVTGC 1428
Query: 148 YQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLH 207
YQ+LEFLGDA++DFL+T+Y+YE + PG+++D+RSA+VNNVT A VR ++H ++L
Sbjct: 1429 YQQLEFLGDAVLDFLITSYIYERCPEMDPGKLTDLRSALVNNVTLACICVRYNIHLYILS 1488
Query: 208 DSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVE 267
+ L E +++F Q A NHE++D + L+EEKDV+ ++ E
Sbjct: 1489 QNAALTEFISQFVDYQIAHNHEVTDH--------------VDLLMEEKDVEC----KMAE 1530
Query: 268 YVDVPKALGDVFEALV 283
YV+VPK LGDV EAL+
Sbjct: 1531 YVEVPKTLGDVIEALI 1546
>gi|328696734|ref|XP_003240110.1| PREDICTED: endoribonuclease dcr-1-like isoform 3 [Acyrthosiphon
pisum]
Length = 1630
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/267 (42%), Positives = 156/267 (58%), Gaps = 33/267 (12%)
Query: 17 EDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNIL 76
EDG P+ S S FL + + DK+VAD VESL G Y+ G+E LQ L I+
Sbjct: 1289 EDG----IPQIGHSQSDLFLHKQSVSDKMVADCVESLIGTYVYKRGVEVGFKVLQGLGII 1344
Query: 77 PQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSH 136
P+ ID + P P + GLD + +P LE+RI Y+F+ K L QAL+H
Sbjct: 1345 PKQFIDT----FKPKP----IDDLYDGLDFSKILPGYELLERRIGYSFKHKHLLAQALTH 1396
Query: 137 PTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYA 196
PTY + YQRLEFLGDAI+DFL+T Y+ E+ H +PGEI+DIRS++VNN+TFAS +
Sbjct: 1397 PTYQFG-FSECYQRLEFLGDAILDFLITTYIIEHCYHKTPGEITDIRSSLVNNITFASLS 1455
Query: 197 VRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKD 256
R+ LH+ +L S ++ E + RF ++Q+ NH+I E + +LIEE
Sbjct: 1456 ARIGLHRFILAKSVQMTEAIDRFYEHQQKNNHKIGQE--------------VLYLIEE-- 1499
Query: 257 VQTDVYGRVVEYVDVPKALGDVFEALV 283
+D Y E VDVPK LGD+FE+L+
Sbjct: 1500 --SDCYA--AESVDVPKVLGDLFESLI 1522
>gi|328696730|ref|XP_003240109.1| PREDICTED: endoribonuclease dcr-1-like isoform 2 [Acyrthosiphon
pisum]
Length = 1648
Score = 188 bits (478), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/267 (42%), Positives = 156/267 (58%), Gaps = 33/267 (12%)
Query: 17 EDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNIL 76
EDG P+ S S FL + + DK+VAD VESL G Y+ G+E LQ L I+
Sbjct: 1307 EDG----IPQIGHSQSDLFLHKQSVSDKMVADCVESLIGTYVYKRGVEVGFKVLQGLGII 1362
Query: 77 PQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSH 136
P+ ID + P P + GLD + +P LE+RI Y+F+ K L QAL+H
Sbjct: 1363 PKQFIDT----FKPKP----IDDLYDGLDFSKILPGYELLERRIGYSFKHKHLLAQALTH 1414
Query: 137 PTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYA 196
PTY + YQRLEFLGDAI+DFL+T Y+ E+ H +PGEI+DIRS++VNN+TFAS +
Sbjct: 1415 PTYQFG-FSECYQRLEFLGDAILDFLITTYIIEHCYHKTPGEITDIRSSLVNNITFASLS 1473
Query: 197 VRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKD 256
R+ LH+ +L S ++ E + RF ++Q+ NH+I E + +LIEE
Sbjct: 1474 ARIGLHRFILAKSVQMTEAIDRFYEHQQKNNHKIGQE--------------VLYLIEE-- 1517
Query: 257 VQTDVYGRVVEYVDVPKALGDVFEALV 283
+D Y E VDVPK LGD+FE+L+
Sbjct: 1518 --SDCYA--AESVDVPKVLGDLFESLI 1540
>gi|302318908|ref|NP_001180543.1| dicer-2 [Bombyx mori]
gi|300669733|dbj|BAJ11655.1| DICER-2 [Bombyx mori]
Length = 1677
Score = 187 bits (475), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 111/269 (41%), Positives = 158/269 (58%), Gaps = 23/269 (8%)
Query: 17 EDGKKVSSPEKLPSSSYN-FLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI 75
++G + PE +S ++ + DK +AD VE+L G YL S GI A+ L+ + +
Sbjct: 1327 QNGIAEAEPEGCAQNSMQCYVHSQAVADKSIADSVEALIGTYLLSGGILAAVKLLEWMEV 1386
Query: 76 LPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALS 135
P + + L+ P + + T +EK +NYTF+D +FLL ALS
Sbjct: 1387 FPPQD-NFADMLHKPVQTPLSKNLATEADIDFLLNNSRTDVEKILNYTFKDSTFLLNALS 1445
Query: 136 HPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASY 195
H +Y NR+T+SY+RLEFLGDAIIDFLVT++++EN L PGE++D+RSA+VNNVTFA+Y
Sbjct: 1446 HSSYIRNRLTSSYERLEFLGDAIIDFLVTSHIFENCRELKPGEMTDLRSALVNNVTFAAY 1505
Query: 196 AVRLDLHKHLLHD-SPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEE 254
V+L LHK+L + +P L + + +F ++Q RNHEI + + LI E
Sbjct: 1506 TVKLGLHKYLCSELNPSLEKAIMKFVEHQIERNHEIEFD--------------VLLLISE 1551
Query: 255 KDVQTDVYGRVVEYVDVPKALGDVFEALV 283
D Q V EYVDVPK L D+FEALV
Sbjct: 1552 VDCQ------VAEYVDVPKVLSDIFEALV 1574
Score = 38.1 bits (87), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 130 LLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
+L AL+ T N+N T +R E LGD+ + F + YL+ F +++ G++++I+ +++N
Sbjct: 1191 VLAALT--TINSND-TFDLERPETLGDSFLKFAASLYLHHKFPNMNEGQLTNIKGKLISN 1247
Query: 190 VTFASYAVRLDL 201
+ +L
Sbjct: 1248 RNLYYAGAKFNL 1259
>gi|388565188|gb|AFK73581.1| dicer-2 [Nilaparvata lugens]
Length = 1656
Score = 183 bits (465), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 112/255 (43%), Positives = 155/255 (60%), Gaps = 28/255 (10%)
Query: 31 SSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKI--DVHEALY 88
S+ +F+ + +K V+D VE+L G+Y++S G+E L+ L ++ I DV+
Sbjct: 1326 SNAHFISQQVTSNKTVSDSVEALLGLYIQSYGLEKGFDMLRWLKVIDPKLITPDVYTK-- 1383
Query: 89 GPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSY 148
V +G +I LEK INY F+D++FLLQALSHPTY N IT +Y
Sbjct: 1384 ----KKVEPTILFKGGQIDFHIHHPDYLEKLINYKFKDRTFLLQALSHPTYQPNNITPTY 1439
Query: 149 QRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
QRLEFLGDAI+DFLVT ++YE +L+PGE++D+RSA+VNNVT AS AVR+ LHK LL
Sbjct: 1440 QRLEFLGDAILDFLVTTHMYEYCDNLTPGELTDLRSALVNNVTLASIAVRIGLHKFLLLR 1499
Query: 209 SPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEY 268
S +L + + F + QE+RNH+ SD+ FLI+E D + G E
Sbjct: 1500 SCQLSKVIEAFVERQESRNHDFSDD--------------TLFLIDEIDC---IIG---ES 1539
Query: 269 VDVPKALGDVFEALV 283
++VPK LGDVFE+LV
Sbjct: 1540 IEVPKILGDVFESLV 1554
>gi|170049284|ref|XP_001855187.1| endoribonuclease Dicer [Culex quinquefasciatus]
gi|167871117|gb|EDS34500.1| endoribonuclease Dicer [Culex quinquefasciatus]
Length = 1665
Score = 179 bits (454), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/250 (39%), Positives = 152/250 (60%), Gaps = 19/250 (7%)
Query: 34 NFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPS 93
N+L + +GDK+ AD +E++ GV + + GI+ + L L ILP K + L +
Sbjct: 1333 NYLSQQAMGDKMPADSMEAMLGVCVSTVGIKRSFRLLSFLGILP--KKENLTTLLDDRIA 1390
Query: 94 AVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEF 153
R + ++ ++E+ ++YTF+D+++LLQAL+H +Y NRIT SYQ+LEF
Sbjct: 1391 NQRLKADVTKNEVDSFLISPGRIERILDYTFKDRTYLLQALTHASYPTNRITGSYQQLEF 1450
Query: 154 LGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLY 213
+GDA++DFL++AY+YE +SPG+++D+RSA+VNN+T A VR LH ++L +S L
Sbjct: 1451 VGDAVLDFLISAYIYEQNPTMSPGQLTDLRSALVNNITLACILVRHGLHLYILSESASLT 1510
Query: 214 ENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPK 273
+ V++F QEA HEI+D+ EE RC G + E+VDVPK
Sbjct: 1511 DTVSKFVAFQEAHKHEITDQVNLLSEESE--RC---------------QGAMAEFVDVPK 1553
Query: 274 ALGDVFEALV 283
ALGDVFE+L+
Sbjct: 1554 ALGDVFESLI 1563
>gi|429137921|gb|AFZ74931.1| dicer 2 [Aphis glycines]
Length = 1628
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/249 (41%), Positives = 145/249 (58%), Gaps = 29/249 (11%)
Query: 35 FLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSA 94
F+ + + DK+VAD VESL G Y+ G+E LQ L I+P+ ID + P P
Sbjct: 1301 FIYKQSVSDKMVADCVESLIGTYVYKRGVEVGFKVLQGLGIIPKQFIDA----FKPKP-- 1354
Query: 95 VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFL 154
L + +P LE+RI Y+F+ K L QAL+HPTY T YQRLEFL
Sbjct: 1355 --IENIYNDLSFSKVLPGYELLERRIGYSFKHKHLLAQALTHPTYQFGY-TECYQRLEFL 1411
Query: 155 GDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYE 214
GDAI+DFL+T Y+ ++ +PGEI+DIRS++VNN+TFAS + R+ LH+ +L S ++ E
Sbjct: 1412 GDAILDFLITTYIIQHCYQKTPGEITDIRSSLVNNITFASLSARIGLHRFILAKSVQMTE 1471
Query: 215 NVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKA 274
+ RF ++Q+ NH+I E I +LIEE +D Y E VDVPK
Sbjct: 1472 AIDRFYEHQQKNNHKIGQE--------------ILYLIEE----SDCYA--AESVDVPKV 1511
Query: 275 LGDVFEALV 283
LGD+FE+L+
Sbjct: 1512 LGDLFESLI 1520
>gi|328716579|ref|XP_001944314.2| PREDICTED: endoribonuclease Dcr-1-like isoform 1 [Acyrthosiphon
pisum]
Length = 1609
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/253 (40%), Positives = 145/253 (57%), Gaps = 24/253 (9%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHP 92
YN + + + DK +AD VE+L G YL SCG GA+LF+ L I +D + Y P
Sbjct: 1276 YNLVTQHSIPDKSIADCVEALIGAYLISCGARGALLFMSWLGIRVLPTLDDSKLGYLKPP 1335
Query: 93 SA--VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQR 150
S+ +R + G + + + E+ + Y FQD+S+LLQA++H +Y NR+T YQR
Sbjct: 1336 SSPLLRNVDDPEG-ELTKLMDGFESFEQHLGYHFQDRSYLLQAMTHASYYPNRLTDCYQR 1394
Query: 151 LEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSP 210
LEFLGDA++D+L+T +LYE+ SPG ++D+RSA+VNN FAS AVR HK+ H SP
Sbjct: 1395 LEFLGDAVLDYLITRHLYEDKRQHSPGALTDLRSALVNNTIFASLAVRNGFHKYFKHLSP 1454
Query: 211 RLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVD 270
L + V RF QE H I +E F+ + E D + E V+
Sbjct: 1455 GLSDVVCRFVTIQEENGHTIDEE---------------FYFLGEDDCEE------AEDVE 1493
Query: 271 VPKALGDVFEALV 283
VPKALGDVFE++
Sbjct: 1494 VPKALGDVFESVA 1506
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S LLQAL+ NAN + +RLE +GD+ + + +TAYLY ++ G++S +RS V
Sbjct: 1125 SVLLQALT--MSNAND-GINLERLETIGDSFLKYAITAYLYCTHDNVHEGKLSHLRSKQV 1181
Query: 188 NNVTF 192
+N+
Sbjct: 1182 SNLNL 1186
>gi|383862048|ref|XP_003706496.1| PREDICTED: endoribonuclease Dcr-1-like [Megachile rotundata]
Length = 1952
Score = 177 bits (449), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 112/284 (39%), Positives = 151/284 (53%), Gaps = 54/284 (19%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LPQSKIDV------H 84
YN + + + DK +AD VE+L G YL +CG GA+LF+ L I LP +I +
Sbjct: 1582 YNLITQHSIPDKSIADCVEALIGAYLIACGPRGALLFMAWLGIHVLPMEEICIVQETEPE 1641
Query: 85 EALYGPHPSA-------------VRCPEQARGLDPL-RYIPECTQ-----------LEKR 119
E + G P +R + +PL RYIP Q LEK
Sbjct: 1642 ERIPGSTPYVKGTNDQGEVTWIQIRYGKLEEPQNPLLRYIPNPEQELLMMLDGYEELEKN 1701
Query: 120 INYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEI 179
I Y F D S+LLQA +H +Y N++T YQRLEFLGDA++D+L+T +LYE+ SPG +
Sbjct: 1702 IGYKFNDISYLLQAFTHASYQPNKLTDCYQRLEFLGDAVLDYLITRHLYEDARQHSPGAL 1761
Query: 180 SDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEE 239
+D+RSA+VNN FAS AVR HK+ H SP L + RF + QE H IS+E
Sbjct: 1762 TDLRSALVNNTIFASLAVRCGFHKYFRHLSPGLSVVINRFVRIQEENGHSISEE------ 1815
Query: 240 EEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
++LI E+ + E V+VPKALGDVFE+L
Sbjct: 1816 ---------YYLIGEEKCEE------AEDVEVPKALGDVFESLA 1844
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 121 NYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEIS 180
N+ S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S
Sbjct: 1411 NHPGPSPSLILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLS 1467
Query: 181 DIRSAMVNNVTF 192
+RS V+N+
Sbjct: 1468 HLRSKQVSNLNL 1479
>gi|157167186|ref|XP_001652212.1| dicer-1 [Aedes aegypti]
gi|108877338|gb|EAT41563.1| AAEL006794-PA [Aedes aegypti]
Length = 1658
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/255 (38%), Positives = 151/255 (59%), Gaps = 22/255 (8%)
Query: 29 PSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALY 88
PS N+L + +GDK AD +E+L GV ++S GIE + L ILP++ +
Sbjct: 1319 PSPMANYLSQQTMGDKTPADAMEALLGVCVQSVGIERSFKLLPHFGILPKTHNVLKLLAD 1378
Query: 89 GPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSY 148
++ R +D ++ ++E + Y F+D+++LLQAL+H +Y NRIT SY
Sbjct: 1379 KIENQRLKTHIDIREVDA--FLKNYRRIESILGYKFKDRTYLLQALTHASYPTNRITGSY 1436
Query: 149 QRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
Q+LEFLGDA++DFL++ Y++E +SPG+++D+RSA+VNNVT A VR LH ++L +
Sbjct: 1437 QQLEFLGDAVLDFLISMYIFEQNPTMSPGQLTDLRSALVNNVTLACILVRHGLHLYILAE 1496
Query: 209 SPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEY 268
S + V++F QE HEI+D+ + L+EE D ++ E+
Sbjct: 1497 SASFTDTVSKFVLFQEQNKHEITDQ--------------VNLLVEESD------RKMAEF 1536
Query: 269 VDVPKALGDVFEALV 283
VDVPKALGDVFE+LV
Sbjct: 1537 VDVPKALGDVFESLV 1551
>gi|57236096|gb|AAW48725.1| dicer-2 [Aedes aegypti]
Length = 1658
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 99/255 (38%), Positives = 151/255 (59%), Gaps = 22/255 (8%)
Query: 29 PSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALY 88
PS N+L + +GDK AD +E+L GV ++S GIE + L ILP++ +
Sbjct: 1319 PSPMANYLSQQTMGDKTPADAMEALLGVCVQSVGIERSFKLLPHFGILPKTHNVLRLLAD 1378
Query: 89 GPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSY 148
++ R +D ++ ++E + Y F+D+++LLQAL+H +Y NRIT SY
Sbjct: 1379 KIENQRLKTHIDIREVDA--FLKNYRRIEGILGYKFKDRTYLLQALTHASYPTNRITGSY 1436
Query: 149 QRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
Q+LEFLGDA++DFL++ Y++E +SPG+++D+RSA+VNNVT A VR LH ++L +
Sbjct: 1437 QQLEFLGDAVLDFLISMYIFEQNPTMSPGQLTDLRSALVNNVTLACILVRHGLHLYILAE 1496
Query: 209 SPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEY 268
S + V++F QE HEI+D+ + L+EE D ++ E+
Sbjct: 1497 SASFTDTVSKFVLFQEQHKHEITDQ--------------VNLLVEESD------RKMAEF 1536
Query: 269 VDVPKALGDVFEALV 283
VDVPKALGDVFE+LV
Sbjct: 1537 VDVPKALGDVFESLV 1551
>gi|321461347|gb|EFX72380.1| hypothetical protein DAPPUDRAFT_308316 [Daphnia pulex]
Length = 1741
Score = 176 bits (445), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/257 (39%), Positives = 145/257 (56%), Gaps = 38/257 (14%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ--ALNILPQSKIDVHEALYGP 90
YN L + + DK +AD VE+L G YLR+CG GA+LF+ L +LP ++E YG
Sbjct: 1409 YNLLTQHSIPDKSIADCVEALIGAYLRACGPRGALLFMSWLGLKVLPV----INEGSYGY 1464
Query: 91 HPSAVRCPEQARGLDPL----RYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITT 146
+ P + LD R + E++I Y F D+S+LLQA SH +Y NR+T
Sbjct: 1465 WTPPI-SPLVDQPLDIHVELDRMLAGFESFEEKICYKFNDRSYLLQAFSHASYYLNRLTD 1523
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
YQRLEFLGDA++D+L+T YLYEN PG ++D+RSA+VNN TFA A R + H++
Sbjct: 1524 CYQRLEFLGDAVLDYLITRYLYENLPRHPPGALTDLRSALVNNTTFAVLAERYEFHRYFK 1583
Query: 207 HDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVV 266
H SP L + + +F + QE H I++E +++IE +DV+
Sbjct: 1584 HLSPSLNQIMDKFIKAQEENGHSINEE---------------YYMIEAEDVE-------- 1620
Query: 267 EYVDVPKALGDVFEALV 283
VPK LGDVFE++
Sbjct: 1621 ----VPKVLGDVFESVA 1633
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 3/63 (4%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQA + + N + +RLE +GD+ + + +T YLY +S + GE+S +RS V
Sbjct: 1240 SVILQAFTMSSANDG---INLERLETIGDSFLKYAITTYLYCKYSSIHEGELSHLRSRQV 1296
Query: 188 NNV 190
+N+
Sbjct: 1297 SNL 1299
>gi|283827860|gb|ADB44075.1| dicer-1 [Marsupenaeus japonicus]
Length = 2482
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 107/263 (40%), Positives = 151/263 (57%), Gaps = 35/263 (13%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LPQSKIDVHEA---- 86
YN L + + DK +AD VE+L G YL +CG GA+LF+ L I LP + D E
Sbjct: 2136 YNLLTQHSIPDKSIADCVEALIGAYLTTCGPRGALLFMSWLGIKVLPCTLEDSPETGQLI 2195
Query: 87 LYG----PHPSAVRCP--EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYN 140
+YG P CP + + LD L + E++I YTFQD+S+LLQA +H +Y
Sbjct: 2196 IYGHLESPQSPLYHCPLTDTKKELDLL--LSGYQVFEEKIGYTFQDRSYLLQAFTHASYY 2253
Query: 141 ANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLD 200
NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D
Sbjct: 2254 KNRLTDCYQRLEFLGDAVLDYLITRHLYEDKRQHSPGALTDLRSALVNNTIFASLAVKYD 2313
Query: 201 LHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTD 260
HK+ H SP L + F + QE H+I++E +F+ E++
Sbjct: 2314 YHKYFRHFSPGLDRVIRDFVKMQEENGHKINEE--------------YYFMEEDECEAA- 2358
Query: 261 VYGRVVEYVDVPKALGDVFEALV 283
E ++VPKALGDVFE++
Sbjct: 2359 ------EDIEVPKALGDVFESVA 2375
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 120 INYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEI 179
+N+ S +LQAL+ NAN + +RLE +GD+ + + +T +LY + G++
Sbjct: 1964 LNHPGPSPSVILQALT--MSNAND-GVNLERLETIGDSFLKYAITTFLYCTYPQRHEGKL 2020
Query: 180 SDIRSAMVNNVTFASYAVRLDLHKHLL 206
S +RS V+N+ R L + ++
Sbjct: 2021 SYLRSKQVSNLNLYRLGKRKGLGECMV 2047
>gi|371486408|gb|AEX31249.1| Dicer 2 [Aedes albopictus]
Length = 1625
Score = 175 bits (443), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/256 (38%), Positives = 154/256 (60%), Gaps = 24/256 (9%)
Query: 29 PSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEAL- 87
PS N+L + +GDK AD +E+L GV +++ GI+ + L +LP++ DV + L
Sbjct: 1286 PSPMANYLSQQTMGDKTPADAMEALLGVCVQTVGIQRSFKLLPYFGMLPKTH-DVLKLLD 1344
Query: 88 YGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTS 147
+R R +D ++ +++E + Y F+D+++LLQAL+H +Y NRIT S
Sbjct: 1345 EKIENQRLRTHIDYREVDG--FLKNHSRIESILGYKFKDRTYLLQALTHASYPTNRITGS 1402
Query: 148 YQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLH 207
YQ+LEFLGDA++DFL++ Y++E +SPG+++D+RSA+VNN+T A VR LH ++L
Sbjct: 1403 YQQLEFLGDAVLDFLISMYIFEQNPTMSPGQLTDLRSALVNNITLACLLVRHGLHLYILA 1462
Query: 208 DSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVE 267
+S + V +F QE HEI+D+ + L+EE D ++ E
Sbjct: 1463 ESASFSDTVNKFVMFQEQNKHEITDQ--------------VNLLVEESD------RKMAE 1502
Query: 268 YVDVPKALGDVFEALV 283
+VDVPKALGDVFE+LV
Sbjct: 1503 FVDVPKALGDVFESLV 1518
>gi|371486410|gb|AEX31250.1| Dicer 2 [Aedes albopictus]
Length = 1659
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 154/256 (60%), Gaps = 24/256 (9%)
Query: 29 PSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEAL- 87
PS N+L + +GDK AD +E+L GV +++ G++ + L +LP++ DV + L
Sbjct: 1320 PSPMANYLSQQTMGDKTPADAMEALLGVCVQTVGMQRSFKLLPYFGMLPKTH-DVLKLLD 1378
Query: 88 YGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTS 147
+R R +D ++ +++E + Y F+D+++LLQAL+H +Y NRIT S
Sbjct: 1379 EKIENQRLRTHIDYREVDG--FLKNHSRIESILGYKFKDRTYLLQALTHASYPTNRITGS 1436
Query: 148 YQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLH 207
YQ+LEFLGDA++DFL++ Y++E +SPG+++D+RSA+VNN+T A VR LH ++L
Sbjct: 1437 YQQLEFLGDAVLDFLISMYIFEQNPTMSPGQLTDLRSALVNNITLACLLVRHGLHLYILA 1496
Query: 208 DSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVE 267
+S + V +F QE HEI+D+ + L+EE D ++ E
Sbjct: 1497 ESASFSDTVNKFVMFQEQNKHEITDQ--------------VNLLVEESD------RKMAE 1536
Query: 268 YVDVPKALGDVFEALV 283
+VDVPKALGDVFE+LV
Sbjct: 1537 FVDVPKALGDVFESLV 1552
>gi|242008637|ref|XP_002425109.1| dicer-1, putative [Pediculus humanus corporis]
gi|212508774|gb|EEB12371.1| dicer-1, putative [Pediculus humanus corporis]
Length = 471
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/248 (40%), Positives = 143/248 (57%), Gaps = 21/248 (8%)
Query: 35 FLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSA 94
FL+ + DK ++DVVE+L GVYL + G+ G L ILP+S E + P
Sbjct: 143 FLNTELMSDKTISDVVEALIGVYLLNGGLAGGFKILNWFGILPESNGTYEEIMKKPVRVN 202
Query: 95 VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFL 154
E++ + L + T LE+ + YTF+ K LL+A++HP+Y NR+T YQRLEFL
Sbjct: 203 DVNDEESAVMTILGDVFY-TDLEETLGYTFKRKELLLEAITHPSYVRNRLTPCYQRLEFL 261
Query: 155 GDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYE 214
GDAI+DFLVT Y+ ENF ++PG I+DIRSA+VNN T A +V+ D HK+LL+ S L +
Sbjct: 262 GDAILDFLVTVYIQENFKDMNPGLITDIRSALVNNSTLACLSVKYDFHKYLLYTSSPLNK 321
Query: 215 NVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKA 274
+ F + Q + NH ++++ +EE D + E V VPKA
Sbjct: 322 CIENFVKIQISNNHAVNEQA--------------LITLEEND------AIMAESVTVPKA 361
Query: 275 LGDVFEAL 282
LGD+FE+L
Sbjct: 362 LGDIFESL 369
>gi|371486404|gb|AEX31247.1| Dicer 2 isoform A [Aedes albopictus]
gi|371486406|gb|AEX31248.1| Dicer 2 isoform B [Aedes albopictus]
Length = 1659
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 98/256 (38%), Positives = 154/256 (60%), Gaps = 24/256 (9%)
Query: 29 PSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEAL- 87
PS N+L + +GDK AD +E+L GV +++ G++ + L +LP++ DV + L
Sbjct: 1320 PSPMANYLSQQTMGDKTPADAMEALLGVCVQTVGMQRSFKLLPYFGMLPKTH-DVLKLLD 1378
Query: 88 YGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTS 147
+R R +D ++ +++E + Y F+D+++LLQAL+H +Y NRIT S
Sbjct: 1379 EKIENQRLRTHIDYREVDG--FLKNHSRIESILGYKFKDRTYLLQALTHASYPTNRITGS 1436
Query: 148 YQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLH 207
YQ+LEFLGDA++DFL++ Y++E +SPG+++D+RSA+VNN+T A VR LH ++L
Sbjct: 1437 YQQLEFLGDAVLDFLISMYIFEQNPTMSPGQLTDLRSALVNNITLACLLVRHGLHLYILA 1496
Query: 208 DSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVE 267
+S + V +F QE HEI+D+ + L+EE D ++ E
Sbjct: 1497 ESASFSDTVNKFVMFQEQNKHEITDQ--------------VNLLVEESD------RKMAE 1536
Query: 268 YVDVPKALGDVFEALV 283
+VDVPKALGDVFE+LV
Sbjct: 1537 FVDVPKALGDVFESLV 1552
>gi|444841767|gb|AGE12616.1| Dicer 2 [Laodelphax striatella]
Length = 1654
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 105/257 (40%), Positives = 153/257 (59%), Gaps = 32/257 (12%)
Query: 31 SSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID----VHEA 86
S+ +F+ + + +K V+D VE+L G+ ++S GIE L+ L + + I V +
Sbjct: 1324 SNAHFISQQVVSNKTVSDSVEALLGLCIKSFGIEKGFEILRWLKVTDPNLIKPDAYVEKK 1383
Query: 87 LYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITT 146
+ S + D +I + LE+ INY F+ ++FLLQALSHPTY N IT
Sbjct: 1384 VEPTILSMIG--------DINFHIHQPDYLERLINYKFKQRAFLLQALSHPTYQPNNITP 1435
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+YQRLEFLGDAI+DFL+T +++E+ +L+PGE++D+RSA+VNNVT AS AVR+ LHK LL
Sbjct: 1436 TYQRLEFLGDAILDFLITTHIFEHCDNLTPGELTDLRSALVNNVTLASIAVRIGLHKFLL 1495
Query: 207 HDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVV 266
S +L + + F + QE+R HE +D+ +LI E D V
Sbjct: 1496 LRSFQLSKVIESFVERQESRQHEFTDQ--------------TLYLINEID------SNVG 1535
Query: 267 EYVDVPKALGDVFEALV 283
E ++VPK LGDVFE+LV
Sbjct: 1536 ECIEVPKILGDVFESLV 1552
>gi|307195788|gb|EFN77602.1| Endoribonuclease Dcr-1 [Harpegnathos saltator]
Length = 1807
Score = 173 bits (439), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 111/284 (39%), Positives = 156/284 (54%), Gaps = 54/284 (19%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LPQSKIDV------H 84
YN + + + DK +AD VE+L G YL +CG GA+LF+ L I LP ++ +
Sbjct: 1437 YNLITQHSIPDKSIADCVEALIGAYLIACGPRGALLFMAWLGIHVLPTEEVQIVSEDEPE 1496
Query: 85 EALYGPHP-------------SAVRCPEQARGLDPL-RYIPE-----CT------QLEKR 119
E + G P + +R + +PL RYIP+ C +LEK
Sbjct: 1497 ERIPGSIPYVKETSEHGEIVWTQIRYGKLEEPQNPLLRYIPDPEGELCMMLDGYEELEKS 1556
Query: 120 INYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEI 179
I Y F+D S+LLQA +H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG +
Sbjct: 1557 IGYKFRDSSYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQHSPGAL 1616
Query: 180 SDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEE 239
+D+RSA+VNN FAS AVR HK+ H SP L + RF + QE H IS+E
Sbjct: 1617 TDLRSALVNNTIFASLAVRCGFHKYFRHLSPGLSVVINRFVRIQEENGHSISEE------ 1670
Query: 240 EEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
++LI +++ + E V+VPKALGDVFE+L
Sbjct: 1671 ---------YYLIGKEECEE------AEDVEVPKALGDVFESLA 1699
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1273 SLILQALTMS--NAND-GINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQV 1329
Query: 188 NNVTF 192
+N+
Sbjct: 1330 SNLNL 1334
>gi|357607884|gb|EHJ65725.1| dicer-2 [Danaus plexippus]
Length = 1871
Score = 173 bits (438), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 102/245 (41%), Positives = 144/245 (58%), Gaps = 24/245 (9%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+ DK VAD VE+L G YL S GI A+ L+ I+P D + + V +
Sbjct: 1546 VSDKSVADCVEALIGTYLLSGGITDAVSILEWFKIIPSE--DKFLSFLTKKVNTVISEGK 1603
Query: 101 ARGLDPLRYIPEC-TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAII 159
A + + C + +E + Y F+D S LL+ALSH +Y NR T SY+RLEFLGDAI+
Sbjct: 1604 ATVQEVDWLLNSCRSDIETILGYKFKDPSLLLEALSHASYIRNRYTRSYERLEFLGDAIL 1663
Query: 160 DFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTR- 218
DFL+TAY+YEN LSPG+++D+RSA+VNNVTFASY VRL LHK+ + EN +
Sbjct: 1664 DFLITAYIYENCGDLSPGDLTDLRSALVNNVTFASYVVRLGLHKYFCSQFNGVLENAIKT 1723
Query: 219 FAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDV 278
F ++QE +H + ++ + +LIEE+D + +Y+DVPKAL D+
Sbjct: 1724 FVEHQEQLDHVLLED--------------VLYLIEEEDCN------IAQYIDVPKALSDI 1763
Query: 279 FEALV 283
FE+L
Sbjct: 1764 FESLT 1768
>gi|312384317|gb|EFR29067.1| hypothetical protein AND_02261 [Anopheles darlingi]
Length = 1651
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/260 (36%), Positives = 151/260 (58%), Gaps = 23/260 (8%)
Query: 24 SPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDV 83
S E+ S+ L +++ DK VAD +E+L GV +++ G E + L I+P+ D+
Sbjct: 1315 SEEESRSTLMAVLQHVQVSDKTVADSMEALLGVCVKAVGYERSFRALSHFGIMPRD-TDL 1373
Query: 84 HEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANR 143
+ L + + ++ +D L PE ++E+ + Y F++++FLLQA +H TY N
Sbjct: 1374 AKLLRTHEYTVLNYQDERETIDRLLINPE--KIERTVGYKFRNRTFLLQAFTHATYTTNT 1431
Query: 144 ITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHK 203
+T SY++LEFLGDA++DFL+T Y++E H+SPG+++D+RSA+VNNVT A VR LH
Sbjct: 1432 LTKSYEQLEFLGDAVLDFLITLYIFERNPHMSPGQLTDLRSALVNNVTLACVLVRFRLHH 1491
Query: 204 HLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYG 263
++L SP L + + +F + Q + + I D + L EE +
Sbjct: 1492 YILSQSPMLTDKIDKFVEVQGQKRNRIGD--------------WVRLLTEESETP----- 1532
Query: 264 RVVEYVDVPKALGDVFEALV 283
+ EYVDVPK LGDVFEAL+
Sbjct: 1533 -LAEYVDVPKVLGDVFEALI 1551
>gi|148829108|gb|ABR14013.1| Dicer-1 [Penaeus monodon]
Length = 2473
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 104/263 (39%), Positives = 150/263 (57%), Gaps = 35/263 (13%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LP--------QSKID 82
YN L + + DK +AD VE+L G YL +CG GA+LF+ L I LP S++
Sbjct: 2127 YNLLTQHSIPDKSIADCVEALIGAYLTTCGPRGALLFMSWLGIKVLPCTLESSPEASELI 2186
Query: 83 VHEALYGPHPSAVRCP--EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYN 140
+ L P CP + + LD L + E++I YTF+D+S+LLQA +H +Y
Sbjct: 2187 TYGHLESPQSPLYHCPLTDTRKELDLL--LSGYQVFEEKIGYTFRDRSYLLQAFTHASYY 2244
Query: 141 ANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLD 200
NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D
Sbjct: 2245 KNRLTDCYQRLEFLGDAVLDYLITRHLYEDKRQHSPGALTDLRSALVNNTIFASLAVKYD 2304
Query: 201 LHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTD 260
HK+ H SP L + F + QE H+I++E +F+ E++
Sbjct: 2305 YHKYFRHFSPGLDRVIRDFVKMQEENGHKINEE--------------YYFMEEDECEAA- 2349
Query: 261 VYGRVVEYVDVPKALGDVFEALV 283
E ++VPKALGDVFE++
Sbjct: 2350 ------EDIEVPKALGDVFESVA 2366
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 120 INYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEI 179
+N+ S +LQAL+ NAN + +RLE +GD+ + + +T +LY + G++
Sbjct: 1955 LNHPGPSPSVILQALT--MSNAND-GVNLERLETIGDSFLKYAITTFLYCTYPQRHEGKL 2011
Query: 180 SDIRSAMVNNVTFASYAVRLDLHKHLL 206
S +RS V+N+ R L + ++
Sbjct: 2012 SYLRSKQVSNLNLYRLGKRKGLGECMV 2038
>gi|307190121|gb|EFN74275.1| Endoribonuclease Dcr-1 [Camponotus floridanus]
Length = 1976
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 113/284 (39%), Positives = 153/284 (53%), Gaps = 54/284 (19%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LPQSKIDV------H 84
YN + + + DK +AD VE+L G YL +CG GA+LF+ L I LP ++ V
Sbjct: 1604 YNLITQHSIPDKSIADCVEALIGAYLIACGPRGALLFMTWLGIHVLPAEEVCVMSESEPE 1663
Query: 85 EALYGPHPSAVRCPEQARGL-------------DPL-RYIPE-----------CTQLEKR 119
E + G P EQ +PL RYIP+ +LEK
Sbjct: 1664 ERIPGSTPYVKGISEQGGATWTQICYGKLEEPQNPLLRYIPDPENELRMMLDGYDELEKS 1723
Query: 120 INYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEI 179
I Y F+D S+LLQA +H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG +
Sbjct: 1724 IGYKFRDSSYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQHSPGAL 1783
Query: 180 SDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEE 239
+D+RSA+VNN FAS AVR HK+ H SP L + RF + QE H IS+E
Sbjct: 1784 TDLRSALVNNTIFASLAVRCGFHKYFRHLSPGLSVVINRFVRIQEENGHSISEE------ 1837
Query: 240 EEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
++LI E++ + E V+VPKALGDVFE+L
Sbjct: 1838 ---------YYLIGEEECEE------AEDVEVPKALGDVFESLA 1866
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1440 SLILQALTMS--NAND-GINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQV 1496
Query: 188 NNVTF 192
+N+
Sbjct: 1497 SNLNL 1501
>gi|340727238|ref|XP_003401955.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dcr-1-like [Bombus
terrestris]
Length = 1957
Score = 172 bits (436), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 113/284 (39%), Positives = 154/284 (54%), Gaps = 54/284 (19%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LPQSKIDV------H 84
YN + + + DK +AD VE+L G YL +CG GA+LF+ L I LP +I +
Sbjct: 1589 YNLITQHSIPDKSIADCVEALIGAYLIACGSRGALLFMAWLGIHVLPTEEITIIQESEPR 1648
Query: 85 EALYGPHP-------------SAVRCPEQARGLDPL-RYIPECTQ-----------LEKR 119
E + G P + +R + +PL RYIP+ Q LEK
Sbjct: 1649 ERVPGSTPYIKGTNEKGQTTWTQIRYGKLEEPQNPLLRYIPDPEQELKMMLDGYEELEKS 1708
Query: 120 INYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEI 179
I Y F D S+LLQA +H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG +
Sbjct: 1709 IGYEFHDISYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDARQHSPGAL 1768
Query: 180 SDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEE 239
+D+RSA+VNN FAS AVR HK+ H SP L + RF + QE H IS+E
Sbjct: 1769 TDLRSALVNNTIFASLAVRCGFHKYFRHLSPGLSIVINRFVRIQEENGHSISEE------ 1822
Query: 240 EEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
++LI E++ + E V+VPKALGDVFE+L
Sbjct: 1823 ---------YYLIGEEECEE------AEDVEVPKALGDVFESLA 1851
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 121 NYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEIS 180
N+ S +LQAL+ NAN + +RLE +GD + + +T YLY + ++ G++S
Sbjct: 1418 NHAGPSPSLILQALTMS--NAND-GINLERLETIGDXFLKYAITTYLYCTYDNIHEGKLS 1474
Query: 181 DIRSAMVNNVTF 192
+RS V+N+
Sbjct: 1475 HLRSKQVSNLNL 1486
>gi|289711908|gb|ACC62400.2| ribonuclease III [Penaeus monodon]
Length = 2473
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 104/263 (39%), Positives = 150/263 (57%), Gaps = 35/263 (13%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LP--------QSKID 82
YN L + + DK +AD VE+L G YL +CG GA+LF+ L I LP S++
Sbjct: 2127 YNLLTQHSIPDKSIADYVEALIGAYLTTCGPRGALLFMSWLGIKVLPCTLESSPEASELI 2186
Query: 83 VHEALYGPHPSAVRCP--EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYN 140
+ L P CP + + LD L + E++I YTF+D+S+LLQA +H +Y
Sbjct: 2187 TYGHLESPQSPLYHCPLTDTRKELDLL--LSGYQVFEEKIGYTFRDRSYLLQAFTHASYY 2244
Query: 141 ANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLD 200
NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D
Sbjct: 2245 KNRLTGCYQRLEFLGDAVLDYLITRHLYEDKRQHSPGALTDLRSALVNNTIFASLAVKYD 2304
Query: 201 LHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTD 260
HK+ H SP L + F + QE H+I++E +F+ E++
Sbjct: 2305 YHKYFRHFSPGLDRVIRDFVKMQEENGHKINEE--------------YYFMEEDECEAA- 2349
Query: 261 VYGRVVEYVDVPKALGDVFEALV 283
E ++VPKALGDVFE++
Sbjct: 2350 ------EDIEVPKALGDVFESVA 2366
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 120 INYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEI 179
+N+ S +LQAL+ NAN + +RLE +GD+ + + +T +LY + G++
Sbjct: 1955 LNHPGPSPSVILQALT--MSNAND-GVNLERLETIGDSFLKYAITTFLYCTYPQRHEGKL 2011
Query: 180 SDIRSAMVNNVTFASYAVRLDLHKHLL 206
S +RS V+N+ R L + ++
Sbjct: 2012 SYLRSKQVSNLNLYRLGKRKGLGECMV 2038
>gi|350423180|ref|XP_003493408.1| PREDICTED: endoribonuclease Dcr-1-like [Bombus impatiens]
Length = 1934
Score = 171 bits (432), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 112/284 (39%), Positives = 154/284 (54%), Gaps = 54/284 (19%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LPQSKIDV------H 84
YN + + + DK +AD VE+L G YL +CG GA+LF+ L I LP +I +
Sbjct: 1564 YNLITQHSIPDKSIADCVEALIGAYLIACGSRGALLFMAWLGIHVLPTEEITIIQESEPR 1623
Query: 85 EALYGPHP-------------SAVRCPEQARGLDPL-RYIPECTQ-----------LEKR 119
E + G P + +R + +PL RYIP+ Q LEK
Sbjct: 1624 ERVPGSTPYIKGTNEKGQTTWTQIRYGKLEEPQNPLLRYIPDPEQELKMMLDGYEELEKS 1683
Query: 120 INYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEI 179
I Y F D S+LLQA +H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG +
Sbjct: 1684 IGYEFHDISYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDGRQHSPGAL 1743
Query: 180 SDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEE 239
+D+RSA+VNN FAS AVR HK+ H SP L + RF + Q+ H IS+E
Sbjct: 1744 TDLRSALVNNTIFASLAVRCGFHKYFRHLSPGLSIVINRFVRIQQENGHSISEE------ 1797
Query: 240 EEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
++LI E++ + E V+VPKALGDVFE+L
Sbjct: 1798 ---------YYLIGEEECEE------AEDVEVPKALGDVFESLA 1826
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 121 NYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEIS 180
N+ S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S
Sbjct: 1393 NHAGPSPSLILQALTMS--NAND-GINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLS 1449
Query: 181 DIRSAMVNNVTF 192
+RS V+N+
Sbjct: 1450 HLRSKQVSNLNL 1461
>gi|332020119|gb|EGI60563.1| Endoribonuclease Dcr-1 [Acromyrmex echinatior]
Length = 1979
Score = 169 bits (428), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 112/284 (39%), Positives = 154/284 (54%), Gaps = 54/284 (19%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LPQSKIDV------H 84
YN + + + DK +AD VE+L G YL +CG GA+LF+ L I LP +I V
Sbjct: 1608 YNLITQHSIPDKSIADCVEALIGAYLIACGPRGALLFMTWLGIHVLPTEEICVISENEPK 1667
Query: 85 EALYGPHP-------------SAVRCPEQARGLDPL-RYIPE-----------CTQLEKR 119
E + G P + + + +PL RYIP+ +LEK
Sbjct: 1668 ERIPGSTPYIKGVNEYRETTWTQICYGKLEEPQNPLLRYIPDPESELYMMLDGYEELEKS 1727
Query: 120 INYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEI 179
I Y F+D S+LLQA +H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG +
Sbjct: 1728 IGYKFRDSSYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQHSPGAL 1787
Query: 180 SDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEE 239
+D+RSA+VNN FAS AVR HK+ H SP L + RF + QE H IS+E
Sbjct: 1788 TDLRSALVNNTIFASLAVRCGFHKYFRHLSPGLSVVINRFVRIQEENGHSISEE------ 1841
Query: 240 EEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
++LI E++ + E V+VPKALGDVFE+L
Sbjct: 1842 ---------YYLIGEEECEE------AEDVEVPKALGDVFESLA 1870
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1444 SLILQALTMS--NAND-GINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQV 1500
Query: 188 NNVTF 192
+N+
Sbjct: 1501 SNLNL 1505
>gi|347968645|ref|XP_003436256.1| AGAP002836-PB [Anopheles gambiae str. PEST]
gi|333467908|gb|EGK96757.1| AGAP002836-PB [Anopheles gambiae str. PEST]
Length = 2336
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/296 (36%), Positives = 155/296 (52%), Gaps = 50/296 (16%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNIL------PQSKIDVHEA 86
YN + + + DK VAD VE+L G YL CG GA+LF+ L I P K++ +
Sbjct: 1937 YNLVTQHSIPDKSVADCVEALIGAYLIECGPRGALLFMAWLGIRVLPIREPPVKLNSNNE 1996
Query: 87 LY-----------GPHPSAVRCPEQARGLDP-------------------------LRYI 110
GP + V E + P R +
Sbjct: 1997 TALTPYKATGQNDGPLSTGVTIAEYGHWVAPPSPMVRANITFGGIETGAAATSRELARLL 2056
Query: 111 PECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYEN 170
+ E+ + Y F+D+S+LLQA++H +Y+ NR+T YQRLEFLGDAI+D+L+T +LYE+
Sbjct: 2057 QGFEEFEQALGYRFRDRSYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRHLYED 2116
Query: 171 FSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEI 230
SPG ++D+RSA+VNN FAS AVR HK+ LH SP L E + RF + Q+ H I
Sbjct: 2117 RRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYFLHLSPGLQEVIDRFVRIQQENGHRI 2176
Query: 231 SDEE---EEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
++EE +E++E G + E+ + G E V+VPKALGDVFE++
Sbjct: 2177 TEEEYYLPDEDDELGEYGA----MGEDGPGEGRGVGE-AEDVEVPKALGDVFESIA 2227
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 72 ALNILP-QSKIDVHEALYGPHPSA--VRCPEQARGLD--PLRYIPECTQLEKRINYTFQD 126
A N P Q + EA H SA + ++A G+D Y P+ +Q +
Sbjct: 1690 ACNYKPKQHSMRSDEANKNGHDSAGVLSTTDEAGGVDYFSFDYQPDLSQ------HPGPS 1743
Query: 127 KSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAM 186
+ +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS
Sbjct: 1744 PAIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQ 1800
Query: 187 VNNVTFASYAVRLDL 201
V+N+ R L
Sbjct: 1801 VSNLNLYRLGRRKRL 1815
>gi|195424855|gb|ACF96960.1| dicer-1 [Litopenaeus vannamei]
Length = 2473
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 105/263 (39%), Positives = 149/263 (56%), Gaps = 35/263 (13%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LPQSKIDVHEAL--- 87
YN L + + DK +AD VE+L G YL +CG GA+LF+ L I LP + EA
Sbjct: 2127 YNLLTQHSIPDKSIADCVEALIGAYLTTCGPRGALLFMSWLGIKVLPCTLESSPEACELI 2186
Query: 88 -YG----PHPSAVRCP--EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYN 140
YG P CP + + LD L + E++I YTF+D+S+LLQA +H +Y
Sbjct: 2187 TYGHLESPQSPPYHCPLTDTRKELDLL--LSGYQVFEEKIGYTFRDRSYLLQASTHASYY 2244
Query: 141 ANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLD 200
NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D
Sbjct: 2245 KNRLTDCYQRLEFLGDAVLDYLITRHLYEDKRQHSPGALTDLRSALVNNTIFASLAVKYD 2304
Query: 201 LHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTD 260
HK+ H SP + F + QE H+I++E +F+ E++
Sbjct: 2305 YHKYFRHFSPGPDRVIRDFVKMQEENGHKINEE--------------YYFMEEDEREAA- 2349
Query: 261 VYGRVVEYVDVPKALGDVFEALV 283
E ++VPKALGDVFE++
Sbjct: 2350 ------EDIEVPKALGDVFESVA 2366
Score = 42.0 bits (97), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 120 INYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEI 179
+N+ S +LQAL+ NAN + +RLE +GD+ + + +T +LY + G++
Sbjct: 1955 LNHPGPSPSVILQALT--MSNAND-GVNLERLETIGDSFLKYAITTFLYCTYPQRHEGKL 2011
Query: 180 SDIRSAMVNNVTFASYAVRLDLHKHLL 206
S +RS V+N+ R L + ++
Sbjct: 2012 SYLRSKQVSNLNLYRLGKRKGLGECMV 2038
>gi|58382645|ref|XP_312076.2| AGAP002836-PA [Anopheles gambiae str. PEST]
gi|55241936|gb|EAA07793.2| AGAP002836-PA [Anopheles gambiae str. PEST]
Length = 2256
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 154/306 (50%), Gaps = 70/306 (22%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNIL------PQSKIDVHEA 86
YN + + + DK VAD VE+L G YL CG GA+LF+ L I P K++ +
Sbjct: 1857 YNLVTQHSIPDKSVADCVEALIGAYLIECGPRGALLFMAWLGIRVLPIREPPVKLNSNNE 1916
Query: 87 LY-----------GPHPSAVRCPEQARGLDP-------------------------LRYI 110
GP + V E + P R +
Sbjct: 1917 TALTPYKATGQNDGPLSTGVTIAEYGHWVAPPSPMVRANITFGGIETGAAATSRELARLL 1976
Query: 111 PECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYEN 170
+ E+ + Y F+D+S+LLQA++H +Y+ NR+T YQRLEFLGDAI+D+L+T +LYE+
Sbjct: 1977 QGFEEFEQALGYRFRDRSYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRHLYED 2036
Query: 171 FSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEI 230
SPG ++D+RSA+VNN FAS AVR HK+ LH SP L E + RF + Q+ H I
Sbjct: 2037 RRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYFLHLSPGLQEVIDRFVRIQQENGHRI 2096
Query: 231 SDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRV-------------VEYVDVPKALGD 277
++EE ++L +E D + YG + E V+VPKALGD
Sbjct: 2097 TEEE--------------YYLPDEDD-ELGEYGAMGEDGPGEGRGVGEAEDVEVPKALGD 2141
Query: 278 VFEALV 283
VFE++
Sbjct: 2142 VFESIA 2147
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 72 ALNILP-QSKIDVHEALYGPHPSA--VRCPEQARGLD--PLRYIPECTQLEKRINYTFQD 126
A N P Q + EA H SA + ++A G+D Y P+ +Q +
Sbjct: 1610 ACNYKPKQHSMRSDEANKNGHDSAGVLSTTDEAGGVDYFSFDYQPDLSQ------HPGPS 1663
Query: 127 KSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAM 186
+ +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS
Sbjct: 1664 PAIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQ 1720
Query: 187 VNNVTFASYAVRLDL 201
V+N+ R L
Sbjct: 1721 VSNLNLYRLGRRKRL 1735
>gi|29424049|gb|AAO73809.1| dicer-1 [Anopheles gambiae]
Length = 2259
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 108/306 (35%), Positives = 154/306 (50%), Gaps = 70/306 (22%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNIL------PQSKIDVHEA 86
YN + + + DK VAD VE+L G YL CG GA+LF+ L I P K++ +
Sbjct: 1860 YNLVTQHSIPDKSVADCVEALIGAYLIECGPRGALLFMAWLGIRVLPIREPPVKLNSNNE 1919
Query: 87 LY-----------GPHPSAVRCPEQARGLDP-------------------------LRYI 110
GP + V E + P R +
Sbjct: 1920 TALTPYKATGQNDGPLSTGVTIAEYGHWVAPPSPMVRANITFGGIETGAAATSRELARLL 1979
Query: 111 PECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYEN 170
+ E+ + Y F+D+S+LLQA++H +Y+ NR+T YQRLEFLGDAI+D+L+T +LYE+
Sbjct: 1980 QGFEEFEQALGYRFRDRSYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRHLYED 2039
Query: 171 FSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEI 230
SPG ++D+RSA+VNN FAS AVR HK+ LH SP L E + RF + Q+ H I
Sbjct: 2040 RRQHSPGALTDLRSALVNNTIFASLAVRHGFHKYFLHLSPGLQEVIDRFVRIQQENGHRI 2099
Query: 231 SDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRV-------------VEYVDVPKALGD 277
++EE ++L +E D + YG + E V+VPKALGD
Sbjct: 2100 TEEE--------------YYLPDEDD-ELGEYGAMGEDGPGEGRGVGEAEDVEVPKALGD 2144
Query: 278 VFEALV 283
VFE++
Sbjct: 2145 VFESIA 2150
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 65/135 (48%), Gaps = 14/135 (10%)
Query: 72 ALNILP-QSKIDVHEALYGPHPSA--VRCPEQARGLD--PLRYIPECTQLEKRINYTFQD 126
A N P Q + EA H SA + ++A G+D Y P+ +Q +
Sbjct: 1610 ACNYKPKQHSMRSDEANKNGHDSAGVLSTTDEAGGVDYFSFDYQPDLSQ------HPGPS 1663
Query: 127 KSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAM 186
+ +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS
Sbjct: 1664 PAIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQ 1720
Query: 187 VNNVTFASYAVRLDL 201
V+N+ R L
Sbjct: 1721 VSNLNLYRLGRRKRL 1735
>gi|170033786|ref|XP_001844757.1| endoribonuclease Dcr-1 [Culex quinquefasciatus]
gi|167874834|gb|EDS38217.1| endoribonuclease Dcr-1 [Culex quinquefasciatus]
Length = 2270
Score = 169 bits (427), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/278 (37%), Positives = 147/278 (52%), Gaps = 50/278 (17%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI----------------L 76
YN + + + DK VAD VE+L G YL CG GA+L + L I +
Sbjct: 1909 YNLVTQHSIPDKSVADCVEALIGAYLIECGPRGALLLMAWLGIRVLPVCEQPFDPTAPRI 1968
Query: 77 PQSKIDVH------EALYG-----PHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQ 125
P S +++YG P P + L+ L + + E + Y FQ
Sbjct: 1969 PGSSAPYEVNGKQIQSIYGYWIPPRSPLLTHAPNPEKSLEHL--LDGYSAFEDSLGYRFQ 2026
Query: 126 DKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSA 185
D+S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA
Sbjct: 2027 DRSYLLQAMTHASYCPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSA 2086
Query: 186 MVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVR 245
+VNN FAS AVR D HK+ H SP L + + RF + Q+ H IS+E
Sbjct: 2087 LVNNTIFASLAVRHDFHKYFRHLSPGLNDVIDRFVRIQQDNGHSISEE------------ 2134
Query: 246 CLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
++LI E + E V+VPKALGDVFE++
Sbjct: 2135 ---YYLISEDECDE------AEDVEVPKALGDVFESVA 2163
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 121 NYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEIS 180
N+ S +LQAL+ N + +RLE +GD+ + + +T YLY + ++ G++S
Sbjct: 1725 NHPGPSPSIILQALTMSNANDG---INLERLETIGDSFLKYAITTYLYCTYENVHEGKLS 1781
Query: 181 DIRSAMVNNVTFASYAVRLDLHKHLL 206
+RS V+N+ R L + ++
Sbjct: 1782 HLRSKQVSNLNLYRLGRRKVLGESMI 1807
>gi|422398915|ref|NP_001116485.2| endoribonuclease Dicer-1 [Apis mellifera]
Length = 1952
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 112/284 (39%), Positives = 155/284 (54%), Gaps = 54/284 (19%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LPQSKIDV------H 84
YN + + + DK +AD VE+L G YL +CG GA+LF+ L I LP +I++
Sbjct: 1582 YNLITQHSIPDKSIADCVEALIGAYLIACGPRGALLFMAWLGIHVLPTEEINIIQETEPK 1641
Query: 85 EALYGPHP-------------SAVRCPEQARGLDPL-RYI--PE---------CTQLEKR 119
+ + G P + +R + +PL RYI PE +LEK
Sbjct: 1642 DRIPGSTPFVKGKNEKGETIWTQIRYGKLEEPQNPLLRYIVDPEEELKLMLDGYEELEKN 1701
Query: 120 INYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEI 179
I Y F D S+LLQA +H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG +
Sbjct: 1702 IGYKFHDISYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDTRQHSPGAL 1761
Query: 180 SDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEE 239
+D+RSA+VNN FAS AVR HK+ H SP L + RF + QE H IS+E
Sbjct: 1762 TDLRSALVNNTIFASLAVRCGFHKYFRHLSPGLSIVINRFVRIQEENGHSISEE------ 1815
Query: 240 EEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
++LI E++ + E V+VPKALGDVFE+L
Sbjct: 1816 ---------YYLIGEEECEE------AEDVEVPKALGDVFESLA 1844
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1418 SLILQALTMS--NAND-GINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQV 1474
Query: 188 NNVTF 192
+N+
Sbjct: 1475 SNLNL 1479
>gi|312376926|gb|EFR23879.1| hypothetical protein AND_11908 [Anopheles darlingi]
Length = 994
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 107/293 (36%), Positives = 154/293 (52%), Gaps = 44/293 (15%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LP------------- 77
YN + + + DK VAD VE+L G YL CG GA+LF+ L I LP
Sbjct: 595 YNLVTQHSIPDKSVADCVEALIGAYLIECGPRGALLFMAWLGIRVLPIRSNNGVPKAINT 654
Query: 78 ----------QSKIDVHEALYG-----PHP--------SAVRCPEQARGLDPLRYIPECT 114
+ +D+ E YG P P + A + R +
Sbjct: 655 GNTQELVQYGRGTVDITE--YGHWVAPPSPMVRANITFGGLEAGAHATARELNRLLEGFE 712
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
E+ + Y FQD+S+LLQA++H +Y+ NR+T YQRLEFLGDAI+D+L+T +LYE+
Sbjct: 713 VFERSLGYHFQDRSYLLQAMTHASYSPNRLTDCYQRLEFLGDAILDYLITRHLYEDRRQH 772
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEE 234
SPG ++D+RSA+VNN FA+ AVR H++ LH SP L E + RF + Q+ H I++EE
Sbjct: 773 SPGALTDLRSALVNNTIFAALAVRHGFHRYFLHLSPGLQEVIDRFVRIQQENGHRITEEE 832
Query: 235 ----EEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+E+++ E + Q + E V+VPKALGDVFE++
Sbjct: 833 YYLPDEDDDMLAADGGFGGGFGEIEGGQALMGSGEAEDVEVPKALGDVFESIA 885
Score = 42.0 bits (97), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
+ +LQAL+ N + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 378 AIILQALTMSNANDG---INLERLETIGDSFLKYAITTYLYCRYDNVHEGKLSHLRSKQV 434
Query: 188 NNVTFASYAVRLDL 201
+N+ R L
Sbjct: 435 SNLNLYRLGRRKRL 448
>gi|380025724|ref|XP_003696618.1| PREDICTED: endoribonuclease Dcr-1-like [Apis florea]
Length = 1966
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 112/284 (39%), Positives = 154/284 (54%), Gaps = 54/284 (19%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LPQSKIDV------H 84
YN + + + DK +AD VE+L G YL +CG GA+LF+ L I LP +I +
Sbjct: 1583 YNLITQHSIPDKSIADCVEALIGAYLIACGPRGALLFMAWLGIHVLPTEEISIIQETEPK 1642
Query: 85 EALYGPHP-------------SAVRCPEQARGLDPL-RYI--PE---------CTQLEKR 119
+ + G P + +R + +PL RYI PE +LEK
Sbjct: 1643 DRIPGSTPYVKGKNEKGQTIWTQIRYGKLEEPQNPLLRYIVDPEEELKLMLDGYEELEKN 1702
Query: 120 INYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEI 179
I Y F D S+LLQA +H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG +
Sbjct: 1703 IGYKFHDISYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDARQHSPGAL 1762
Query: 180 SDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEE 239
+D+RSA+VNN FAS AVR HK+ H SP L + RF + QE H IS+E
Sbjct: 1763 TDLRSALVNNTIFASLAVRCGFHKYFRHLSPGLSIVINRFVRIQEENGHSISEE------ 1816
Query: 240 EEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
++LI E++ + E V+VPKALGDVFE+L
Sbjct: 1817 ---------YYLIGEEECEE------AEDVEVPKALGDVFESLA 1845
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1419 SLILQALTMS--NAND-GINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQV 1475
Query: 188 NNVTF 192
+N+
Sbjct: 1476 SNLNL 1480
>gi|158300291|ref|XP_320248.4| AGAP012289-PA [Anopheles gambiae str. PEST]
gi|157013088|gb|EAA00264.4| AGAP012289-PA [Anopheles gambiae str. PEST]
Length = 1672
Score = 167 bits (423), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 151/261 (57%), Gaps = 25/261 (9%)
Query: 24 SPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDV 83
+P S+ + L ++++ DKVVADV E+L GV +++ G E + FL L I+P+ DV
Sbjct: 1337 APAPSQSTLHTVLQQVQIRDKVVADVTEALLGVCVKTVGYERSFRFLSHLGIIPKGA-DV 1395
Query: 84 HEAL-YGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNAN 142
L P P + + +D L PE ++E + Y F+++++LLQA +H +Y +N
Sbjct: 1396 PMLLRTTTFPIGDYFPVRHK-VDQLLCNPE--RIEATLGYRFRNRTYLLQAFTHTSYTSN 1452
Query: 143 RITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLH 202
+T SYQ+LEFLGDA++DFLV+ Y+YE +SPG+++D+RSA+VNNV A VR +LH
Sbjct: 1453 SLTGSYQQLEFLGDAVLDFLVSMYIYERNPSMSPGQLTDLRSALVNNVNLACVLVRNELH 1512
Query: 203 KHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVY 262
+H+L SP L + + +F ++ S+ + L EE D
Sbjct: 1513 RHILSQSPMLTDAIGKFVAVHRCHRNQGSN--------------WVRLLTEESDTP---- 1554
Query: 263 GRVVEYVDVPKALGDVFEALV 283
+ EYVDVPK LGDV EAL+
Sbjct: 1555 --MAEYVDVPKVLGDVLEALI 1573
>gi|425626948|gb|AFX89032.1| dicer 1 [Mayetiola destructor]
Length = 2057
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 104/277 (37%), Positives = 149/277 (53%), Gaps = 47/277 (16%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LPQSKIDVHEALYGP 90
YN + + + DK +AD VE+L G L G GA+LF+ L I LP +I +E
Sbjct: 1693 YNLVTQHSIPDKSIADCVEALIGANLIEGGPRGALLFMAWLGIRVLPSKEIPFNENSLEN 1752
Query: 91 HPSAVRCPEQ------------ARGLDPL------------RYIPECTQLEKRINYTFQD 126
P + + E+ A PL R++ + E+ I Y F D
Sbjct: 1753 IPGSTKPFERDGKKYQIVYGYWASPKSPLLHFSANPYETLERFLNGYSVFEEHIGYHFND 1812
Query: 127 KSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAM 186
+S+LLQA++H +Y+ NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+
Sbjct: 1813 RSYLLQAMTHASYSQNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSAL 1872
Query: 187 VNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRC 246
VNN FAS AVR HK+ H SP L + + RF + Q NH IS+E
Sbjct: 1873 VNNTIFASLAVRHGFHKYFRHLSPSLNDVIDRFVRIQVENNHSISEE------------- 1919
Query: 247 LIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
F+LI E++ E V+VPKALGD+FE++
Sbjct: 1920 --FYLISEEECDE------AEDVEVPKALGDIFESVA 1948
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 121 NYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEIS 180
+Y+ S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S
Sbjct: 1508 DYSGPSPSIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYCTYENVHEGKLS 1564
Query: 181 DIRSAMVNNVTFASYAVRLDLHKHLL 206
+RS V+N+ R L + ++
Sbjct: 1565 HLRSRQVSNLNLYRLGRRKMLGERMI 1590
>gi|170181362|gb|ACB11577.1| dicer-1 CG4792-PA-like protein [Apis mellifera]
Length = 1946
Score = 166 bits (421), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 111/284 (39%), Positives = 154/284 (54%), Gaps = 54/284 (19%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LPQSKIDV------H 84
YN + + + DK +AD VE+L G YL +CG GA+LF+ L I LP +I++
Sbjct: 1582 YNLITQHSIPDKSIADCVEALIGAYLIACGPRGALLFMAWLGIHVLPTEEINIIQETEPK 1641
Query: 85 EALYGPHP-------------SAVRCPEQARGLDPL-RYI--PE---------CTQLEKR 119
+ + G P + +R + +PL RYI PE +LEK
Sbjct: 1642 DRIPGSTPFVKGKNEKGETIWTQIRYGKLEEPQNPLLRYIVDPEEELKLMLDGYEELEKN 1701
Query: 120 INYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEI 179
I Y F D S+LLQA +H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG +
Sbjct: 1702 IGYKFHDISYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDTRQHSPGAL 1761
Query: 180 SDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEE 239
+D+RSA+VNN FAS AVR HK+ H SP L + RF + QE H I +E
Sbjct: 1762 TDLRSALVNNTIFASLAVRCGFHKYFRHLSPGLSIVINRFVRIQEENGHSIGEE------ 1815
Query: 240 EEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
++LI E++ + E V+VPKALGDVFE+L
Sbjct: 1816 ---------YYLIGEEECEE------AEDVEVPKALGDVFESLA 1844
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 121 NYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEIS 180
N+ S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S
Sbjct: 1411 NHPGPSPSLILQALTMS--NAND-GINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLS 1467
Query: 181 DIRSAMVNNVTF 192
+RS V+N+
Sbjct: 1468 HLRSKQVSNLNL 1479
>gi|444841769|gb|AGE12617.1| Dicer 2 [Nilaparvata lugens]
Length = 1448
Score = 166 bits (421), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 133/205 (64%), Gaps = 8/205 (3%)
Query: 31 SSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKI--DVHEALY 88
S+ +F+ + + +K V+D VE+L G+Y++S G+E L+ L ++ I DV+
Sbjct: 1186 SNAHFISQQVISNKTVSDSVEALLGLYIQSYGLEKGFDMLRWLKVIDPKLITPDVYTK-- 1243
Query: 89 GPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSY 148
V +G +I LEK INY F++++FLLQALSHPTY N IT +Y
Sbjct: 1244 ----KKVEPTILFKGGQIDFHIHHPDYLEKLINYKFKNRAFLLQALSHPTYQPNNITPTY 1299
Query: 149 QRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
QRLEFLGDAI+DFLVT ++YE +L+PGE++D+RSA+VNNVT AS AVR+ LHK LL
Sbjct: 1300 QRLEFLGDAILDFLVTTHMYEYCDNLTPGELTDLRSALVNNVTLASIAVRIGLHKFLLLR 1359
Query: 209 SPRLYENVTRFAQNQEARNHEISDE 233
S +L + + F + QE+RNH+ SD+
Sbjct: 1360 SCQLSKVIEAFVERQESRNHDFSDD 1384
>gi|411170363|gb|AFW16070.1| dicer-1 [Nilaparvata lugens]
Length = 2239
Score = 166 bits (419), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 112/293 (38%), Positives = 158/293 (53%), Gaps = 49/293 (16%)
Query: 19 GKKVSSP---EKLPS-SSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALN 74
G SP E LP N + + + DK +AD VE+L G YL CG GA++F+ L
Sbjct: 1857 GTMTDSPLSVENLPCFVPCNLITQHSIPDKSIADCVEALIGAYLIECGPRGALIFMSWLG 1916
Query: 75 I--LPQSKIDVHEALYGPHPSAVRCPEQARG------LDP-----LRYI--PECT----- 114
I +P ++ V + P P+Q + P LR++ PEC
Sbjct: 1917 IKVMPCEEVKVTDDTALERPVGSHLPDQNNVQIRYGFVKPPRSPLLRHVSNPECELERLL 1976
Query: 115 ----QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYEN 170
LE+ + Y F D+S+LLQA++H +Y+ NR+T YQRLEFLGDA +D+L+T +LYE+
Sbjct: 1977 AGFDVLERSLRYRFNDRSYLLQAMTHASYHTNRLTDCYQRLEFLGDAALDYLITRHLYED 2036
Query: 171 FSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEI 230
PG+++D+RSA+VNN FAS AVR HK+ H SP L E + RF + QE H I
Sbjct: 2037 KRQHCPGDLTDLRSALVNNTIFASLAVRHGFHKYFCHLSPGLSEVIERFVRIQEENGHAI 2096
Query: 231 SDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
S+E C +LI E++ + E V+VPKALGDVFE++
Sbjct: 2097 SEE------------C---YLIGEEECEE------AEDVEVPKALGDVFESVA 2128
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S LLQAL+ NAN + +RLE +GD+ + F +T YLY + + G++S +RS V
Sbjct: 1718 SVLLQALT--MSNAND-GINLERLETIGDSFLKFAITTYLYCVYESVHEGKLSHLRSKQV 1774
Query: 188 NNVTFASYAVRLDLHK 203
+N+ RL HK
Sbjct: 1775 SNLNL----YRLGKHK 1786
>gi|157120736|ref|XP_001659747.1| dicer-1 [Aedes aegypti]
gi|108883036|gb|EAT47261.1| AAEL001612-PA [Aedes aegypti]
Length = 2193
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/278 (37%), Positives = 148/278 (53%), Gaps = 50/278 (17%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LPQSKIDVHE----- 85
YN + + + DK VAD VE+L G YL CG GA+L + L I LP ++ E
Sbjct: 1832 YNLVTQHSIPDKSVADCVEALIGAYLIECGPRGALLLMAWLGIRVLPVYEVPYDENNPKV 1891
Query: 86 ---------------ALYG-----PHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQ 125
++YG P + P + L+ L + + E + Y F
Sbjct: 1892 PGSSQRYEKDGIAMQSVYGYWVPPKSPLLMYAPNPQQTLEHL--LDGYSAFEDSLGYQFT 1949
Query: 126 DKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSA 185
D+S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA
Sbjct: 1950 DRSYLLQAMTHASYCPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSA 2009
Query: 186 MVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVR 245
+VNN FAS AVR D HK+ H SP L + + RF + Q+ H IS+E
Sbjct: 2010 LVNNTIFASLAVRHDFHKYFRHLSPGLNDVIDRFVRIQQDNGHIISEE------------ 2057
Query: 246 CLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
++LI E + E V+VPKALGDVFE++
Sbjct: 2058 ---YYLISEDECDE------AEDVEVPKALGDVFESVA 2086
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 121 NYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEIS 180
N+ S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S
Sbjct: 1648 NHPGPSPSIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYCTYENVHEGKLS 1704
Query: 181 DIRSAMVNNVTFASYAVRLDLHKHLL 206
+RS V+N+ R L + ++
Sbjct: 1705 HLRSKQVSNLNLYRLGRRKVLGESMI 1730
>gi|242018047|ref|XP_002429494.1| dicer-1, putative [Pediculus humanus corporis]
gi|212514432|gb|EEB16756.1| dicer-1, putative [Pediculus humanus corporis]
Length = 2179
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 108/280 (38%), Positives = 149/280 (53%), Gaps = 50/280 (17%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LPQSKI--------D 82
YN + + + DK +AD VE+L G YL +CG GA+LF+ L I LP+ + D
Sbjct: 1805 YNLMTQHSIPDKSIADCVEALIGAYLVACGPRGALLFMSWLGIKVLPKEEKFFESENDPD 1864
Query: 83 VHEALYGPHPSAVRCPEQARGLDPLR--------YIP----ECTQL-------EKRINYT 123
+ + + P V L+ +IP E +L E+ I Y
Sbjct: 1865 IKKGVGASRPIKVMTNNGEVTFGKLKSPKRPLICHIPNPEGELEKLLRGFDIFEESIKYR 1924
Query: 124 FQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIR 183
F+D+S+LLQAL+H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ H SPG ++D+R
Sbjct: 1925 FRDRSYLLQALTHASYYPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRHHSPGALTDLR 1984
Query: 184 SAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGI 243
SA+VNN FAS AVR D HK+ H P L E V RF + Q+A H IS
Sbjct: 1985 SALVNNTIFASLAVRHDFHKYFRHLCPSLNEVVDRFVRFQQANGHAIS------------ 2032
Query: 244 VRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
EE + + E V+VPKALGDVFE++
Sbjct: 2033 ---------EEFYLIEEEECEEAEDVEVPKALGDVFESVA 2063
Score = 41.2 bits (95), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1640 SLILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYCIYENVHEGKLSHLRSKQV 1696
Query: 188 NN 189
+N
Sbjct: 1697 SN 1698
>gi|328716581|ref|XP_003245985.1| PREDICTED: endoribonuclease Dcr-1-like isoform 2 [Acyrthosiphon
pisum]
Length = 1489
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/203 (43%), Positives = 124/203 (61%), Gaps = 3/203 (1%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHP 92
YN + + + DK +AD VE+L G YL SCG GA+LF+ L I +D + Y P
Sbjct: 1276 YNLVTQHSIPDKSIADCVEALIGAYLISCGARGALLFMSWLGIRVLPTLDDSKLGYLKPP 1335
Query: 93 SA--VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQR 150
S+ +R + G + + + E+ + Y FQD+S+LLQA++H +Y NR+T YQR
Sbjct: 1336 SSPLLRNVDDPEG-ELTKLMDGFESFEQHLGYHFQDRSYLLQAMTHASYYPNRLTDCYQR 1394
Query: 151 LEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSP 210
LEFLGDA++D+L+T +LYE+ SPG ++D+RSA+VNN FAS AVR HK+ H SP
Sbjct: 1395 LEFLGDAVLDYLITRHLYEDKRQHSPGALTDLRSALVNNTIFASLAVRNGFHKYFKHLSP 1454
Query: 211 RLYENVTRFAQNQEARNHEISDE 233
L + V RF QE H I +E
Sbjct: 1455 GLSDVVCRFVTIQEENGHTIDEE 1477
Score = 43.1 bits (100), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 40/65 (61%), Gaps = 3/65 (4%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S LLQAL+ NAN + +RLE +GD+ + + +TAYLY ++ G++S +RS V
Sbjct: 1125 SVLLQALT--MSNAND-GINLERLETIGDSFLKYAITAYLYCTHDNVHEGKLSHLRSKQV 1181
Query: 188 NNVTF 192
+N+
Sbjct: 1182 SNLNL 1186
>gi|195109134|ref|XP_001999145.1| GI24348 [Drosophila mojavensis]
gi|193915739|gb|EDW14606.1| GI24348 [Drosophila mojavensis]
Length = 2256
Score = 162 bits (411), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 145/276 (52%), Gaps = 48/276 (17%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LP------------- 77
YN + + + DK +AD VE+L G YL CG GA+LF+ L I LP
Sbjct: 1897 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGIRVLPYQLEPAAADIEQR 1956
Query: 78 ---QSKIDVHE--ALYGPHPSAVR-----CPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
+K D + +YG P+ P R L+ L + + E + YTF+D+
Sbjct: 1957 KPGSTKPDANNMVTVYGDWPTPRSPLLHFAPNAHRELEEL--LSGFEEFEASLGYTFRDR 2014
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+V
Sbjct: 2015 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2074
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCL 247
NN FAS AVR HK+ H SP L + + RF + Q+ H C+
Sbjct: 2075 NNTIFASLAVRHGFHKYFRHLSPGLNDVIDRFVRIQQENGH-----------------CI 2117
Query: 248 IFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+ + D E V+VPKALGDVFE++
Sbjct: 2118 SEEYYLLSEEECD----DAEDVEVPKALGDVFESIA 2149
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1727 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1783
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1784 ANLNLYRLGRRKRLGEYMI 1802
>gi|156553056|ref|XP_001605287.1| PREDICTED: endoribonuclease Dcr-1 [Nasonia vitripennis]
Length = 1917
Score = 162 bits (410), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 107/284 (37%), Positives = 150/284 (52%), Gaps = 51/284 (17%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LPQSKI------DVH 84
YN + + + DK +AD VE+L G YL +CG GA+LF+ L I LP ++
Sbjct: 1544 YNLITQHSIPDKSIADCVEALIGAYLIACGPRGALLFMSWLGIHVLPTEEVVTISDSKPT 1603
Query: 85 EALYGPHP-------------SAVRCPEQARGLDPLRY-IPECT-----------QLEKR 119
+ L G P + +R + PL Y +P+ LE+
Sbjct: 1604 DRLPGSTPYVELGEEGGSTKWTQLRYKKLQEPPSPLFYNVPQPEIELEIMLDGYDSLERS 1663
Query: 120 INYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEI 179
I YTF+++S+LLQA +H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG +
Sbjct: 1664 IGYTFRNRSYLLQAFTHASYQPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGAL 1723
Query: 180 SDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEE 239
+D+RSA+VNN FAS AVR HK+ H SP L + RF + QE H IS+E
Sbjct: 1724 TDLRSALVNNTIFASLAVRCGFHKYFRHLSPGLNTVIDRFVRIQEENGHSISEE------ 1777
Query: 240 EEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
++LI + E V+VPKALGDVFE+L
Sbjct: 1778 ---------YYLI---GEREFEEAEEAEDVEVPKALGDVFESLA 1809
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 89 GPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSY 148
GP P+ +G Y PE ++ S +LQAL+ NAN +
Sbjct: 1344 GPAELTKLVPKYNKGSFSFDYQPELD------GHSGPSPSLILQALT--MSNAND-GINL 1394
Query: 149 QRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTF 192
+RLE +GD+ + + +T YL+ ++++ G++S +RS V+N+
Sbjct: 1395 ERLETIGDSFLKYAITTYLFCTYNNIHEGKLSHLRSKQVSNLNL 1438
>gi|37266499|gb|AAQ90464.1| Dicer1 [Danio rerio]
Length = 1243
Score = 161 bits (408), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/263 (39%), Positives = 147/263 (55%), Gaps = 31/263 (11%)
Query: 30 SSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALN--ILP---QSKIDVH 84
S SY+ + DK +AD VE+L G YL SCG A LFL +L +LP QS
Sbjct: 897 SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPPEKQSSGGSA 956
Query: 85 EALYGPHPSAVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYN 140
E YG RC P+ R L+ L I E +INYTF++K++LLQA +H +Y+
Sbjct: 957 ELQYGWLKIPPRCMFEHPDAERTLNHL--ISGFLNFESKINYTFKNKAYLLQAFTHASYH 1014
Query: 141 ANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLD 200
N IT YQRLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D
Sbjct: 1015 YNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYD 1074
Query: 201 LHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTD 260
HK+ SP L+ + F Q Q +N E +G ++ + +++
Sbjct: 1075 YHKYFKAVSPELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSE 1114
Query: 261 VYGRVVEYVDVPKALGDVFEALV 283
E ++VPKA+GD+FE+L
Sbjct: 1115 EDEEKEEDIEVPKAMGDIFESLA 1137
>gi|238814324|ref|NP_001154925.1| endoribonuclease Dicer [Danio rerio]
gi|229485378|sp|Q6TV19.2|DICER_DANRE RecName: Full=Endoribonuclease Dicer
Length = 1865
Score = 161 bits (407), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 105/263 (39%), Positives = 147/263 (55%), Gaps = 31/263 (11%)
Query: 30 SSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALN--ILP---QSKIDVH 84
S SY+ + DK +AD VE+L G YL SCG A LFL +L +LP QS
Sbjct: 1519 SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPPEKQSSGGSA 1578
Query: 85 EALYGPHPSAVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYN 140
E YG RC P+ R L+ L I E +INYTF++K++LLQA +H +Y+
Sbjct: 1579 ELQYGWLKIPPRCMFEHPDAERTLNHL--ISGFLNFESKINYTFKNKAYLLQAFTHASYH 1636
Query: 141 ANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLD 200
N IT YQRLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D
Sbjct: 1637 YNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYD 1696
Query: 201 LHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTD 260
HK+ SP L+ + F Q Q +N E +G ++ + +++
Sbjct: 1697 YHKYFKAVSPELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSE 1736
Query: 261 VYGRVVEYVDVPKALGDVFEALV 283
E ++VPKA+GD+FE+L
Sbjct: 1737 EDEEKEEDIEVPKAMGDIFESLA 1759
>gi|321458470|gb|EFX69538.1| hypothetical protein DAPPUDRAFT_329028 [Daphnia pulex]
Length = 1597
Score = 160 bits (406), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 99/253 (39%), Positives = 144/253 (56%), Gaps = 32/253 (12%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI-LPQSKIDVHEALYG-------PH 91
++ K VAD VE+L G+YL GI+GA+ ++ + + +P S D + P
Sbjct: 1269 RISKKSVADSVEALFGLYLTLHGIKGALKVMRWMGVNVPDSSGDEDSSSSSSSFGGTPPE 1328
Query: 92 PSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRL 151
P + P+ LD ++ LE+ +N+ F ++ +LLQA SH +Y+ NR+T+ YQRL
Sbjct: 1329 PLLLDSPQAKHLLD--DHLAGFETLERSLNFRFGNRFYLLQAFSHASYHHNRMTSCYQRL 1386
Query: 152 EFLGDAIIDFLVTAYLYE-NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSP 210
EFLGDA+ D+L+T YLY+ L+PG +SD+RSA+VNNVTFA AVR H++L H P
Sbjct: 1387 EFLGDAVFDYLITKYLYDCRLFQLTPGALSDMRSALVNNVTFAVLAVRNGFHRYLKHLVP 1446
Query: 211 RLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVD 270
+++ + RF Q QE +H DE FFLI D + E V+
Sbjct: 1447 DVHQAIDRFVQQQEMCDHATPDE---------------FFLIGTHD------DPMAEAVE 1485
Query: 271 VPKALGDVFEALV 283
VPK LGD+FE+LV
Sbjct: 1486 VPKVLGDIFESLV 1498
>gi|195150547|ref|XP_002016212.1| GL10619 [Drosophila persimilis]
gi|194110059|gb|EDW32102.1| GL10619 [Drosophila persimilis]
Length = 1720
Score = 160 bits (405), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 148/277 (53%), Gaps = 37/277 (13%)
Query: 30 SSSYN-FLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALY 88
SS N F + + +KVVAD +E+L GV +R+ G++ L+ I L
Sbjct: 1356 SSGVNYFFGEVTVQNKVVADTLEALLGVIVRNYGLQHGFRMLEYFGICKPEVDKPLSQLL 1415
Query: 89 GPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSY 148
+ + A D ++ + LE+ + Y F+D+ +LLQAL+HP++ NR+T Y
Sbjct: 1416 DLQLKSTKMRANASPGDIDGFLINHSYLEQNLGYKFRDRGYLLQALTHPSFPTNRLTGCY 1475
Query: 149 QRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
Q LEF+GDAI+DFL++AY++EN + L PGE++D+RSA+VNN T VR LH +L +
Sbjct: 1476 QELEFIGDAILDFLISAYIFENNTKLRPGELTDLRSALVNNTTLGCICVRHKLHLFILAE 1535
Query: 209 SPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYG----- 263
+ L E +++F + QE++ H +++ + FL+EE+DVQ +
Sbjct: 1536 NALLSETISKFVKFQESQGHRVTNH--------------VRFLLEERDVQPVILDLDDEV 1581
Query: 264 -----------------RVVEYVDVPKALGDVFEALV 283
+ + VDVPKALGDV EAL+
Sbjct: 1582 EMAMENDSEDGPPIGAFNLAQNVDVPKALGDVLEALI 1618
>gi|440655799|gb|AGC22548.1| dicer [Ctenopharyngodon idella]
Length = 1881
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 104/263 (39%), Positives = 147/263 (55%), Gaps = 31/263 (11%)
Query: 30 SSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALN--ILP---QSKIDVH 84
S +Y+ + DK +AD VE+L G YL SCG A LFL +L +LP QS
Sbjct: 1535 SITYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPPEKQSSGGSA 1594
Query: 85 EALYGPHPSAVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYN 140
E YG RC P+ R L+ L I EK+INY F++K++LLQA +H +Y+
Sbjct: 1595 ELQYGWLKIPPRCMFDHPDAERTLNHL--ISGFENFEKKINYMFKNKAYLLQAFTHASYH 1652
Query: 141 ANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLD 200
N IT YQRLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D
Sbjct: 1653 YNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYD 1712
Query: 201 LHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTD 260
HK+ SP L+ + F Q Q +N E +G ++ + +++
Sbjct: 1713 YHKYFKAVSPELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSE 1752
Query: 261 VYGRVVEYVDVPKALGDVFEALV 283
E ++VPKA+GD+FE+L
Sbjct: 1753 EDEEKEEDIEVPKAMGDIFESLA 1775
>gi|193582606|ref|XP_001943370.1| PREDICTED: endoribonuclease Dcr-1-like [Acyrthosiphon pisum]
Length = 1626
Score = 160 bits (404), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 97/245 (39%), Positives = 133/245 (54%), Gaps = 28/245 (11%)
Query: 42 GDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQA 101
DK +AD VE+L G YL SCG GA+LF+ L I + +D + Y P + P
Sbjct: 1302 NDKSIADCVEALIGAYLISCGTRGALLFMSWLGITVLNTLDDSKLGYLKLPPS---PLLR 1358
Query: 102 RGLDP----LRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
DP + + E+ + Y FQD+S+LLQA++H +Y N +T YQRLEFLGDA
Sbjct: 1359 NVNDPEGELTKLMDGFESFEQHLGYYFQDRSYLLQAMTHASYYPNCLTDCYQRLEFLGDA 1418
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
++D+L+T +LYE+ PG ++D+RSA+VNN FAS AV+ HK+L H SP L E V
Sbjct: 1419 VLDYLITRHLYEDKRRHPPGALTDLRSALVNNTIFASLAVKNGFHKYLKHLSPGLSEVVY 1478
Query: 218 RFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGD 277
RF QE H I +E F E D + E V+ PK LGD
Sbjct: 1479 RFVAIQEENGHTIDEE---------------FCFSGEDDFED------AEDVEAPKVLGD 1517
Query: 278 VFEAL 282
+FE++
Sbjct: 1518 IFESV 1522
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 40/66 (60%), Gaps = 5/66 (7%)
Query: 128 SFLLQALSHPTYNANRITT-SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAM 186
S LLQAL+ AN I +RLE +GD+ + + VTAYLY +++ G +SD+RS
Sbjct: 1189 SILLQALT----TANAIDGYDLERLETIGDSFLKYAVTAYLYCTHNNVHEGILSDLRSNH 1244
Query: 187 VNNVTF 192
V+N+
Sbjct: 1245 VSNLNL 1250
>gi|194755862|ref|XP_001960198.1| GF13246 [Drosophila ananassae]
gi|190621496|gb|EDV37020.1| GF13246 [Drosophila ananassae]
Length = 1727
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 97/272 (35%), Positives = 153/272 (56%), Gaps = 23/272 (8%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEAL- 87
S+ NF + R + DKVVAD +E+L GV +++ G+ L+ I K D+ + L
Sbjct: 1359 SAELNFCIGRANIADKVVADTLEALLGVVVKNYGLTHGFRMLEYFGI---CKADIGKPLT 1415
Query: 88 ----YGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANR 143
+ +R +D ++ LE+ + YTF+D+ +LLQAL+HP+Y NR
Sbjct: 1416 QLLDLRLGGANMRTNVSTTEIDS--FLINHANLEQNLGYTFKDRGYLLQALTHPSYPTNR 1473
Query: 144 ITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHK 203
IT YQ+LEF+GDAI+DFL++ Y++EN + ++PG+++D+RSA+VNN T A VR +H
Sbjct: 1474 ITGCYQQLEFIGDAILDFLISGYIFENNTKMTPGQLTDLRSALVNNTTLACICVRHKIHL 1533
Query: 204 HLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEE--------EGIVRCLIFFLIEEK 255
+L ++ L E + F Q QE +NH +++ EE +G V+ + E
Sbjct: 1534 FILAENALLSEAIASFVQFQETQNHRVTNHVRILLEENDTTPLDVDGEVKSMEIDETTES 1593
Query: 256 DVQTDVYGR----VVEYVDVPKALGDVFEALV 283
+ V + + + VDVPKALGDV EAL+
Sbjct: 1594 EENNGVPTKGDYNMSQNVDVPKALGDVLEALI 1625
>gi|432936630|ref|XP_004082201.1| PREDICTED: endoribonuclease Dicer-like [Oryzias latipes]
Length = 1890
Score = 159 bits (403), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 102/272 (37%), Positives = 146/272 (53%), Gaps = 40/272 (14%)
Query: 30 SSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI-------------- 75
S SY+ + DK +AD VE+L G YL SCG A +FL +L +
Sbjct: 1535 SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQMFLCSLGLKVLPSEPGTSRASK 1594
Query: 76 LPQSKIDVHEALYGPHPSAVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLL 131
P S+ + YG RC P+ R L L I EK+INY+FQ+K++LL
Sbjct: 1595 APSSRTSAADLSYGWLKIPPRCMLAHPDAERTLQHL--ISGFENFEKKINYSFQNKAYLL 1652
Query: 132 QALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVT 191
QA +H +Y+ N IT YQRLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN
Sbjct: 1653 QAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTI 1712
Query: 192 FASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFL 251
FAS AV+ D HK+ SP L+ + F Q Q +N E +G
Sbjct: 1713 FASLAVKYDYHKYFKAISPELFHVIDDFVQFQLEKN-----------EMQG--------- 1752
Query: 252 IEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
++ + +++ E ++VPKA+GD+FE+L
Sbjct: 1753 MDSELRRSEEDEEKEEDIEVPKAMGDIFESLA 1784
>gi|198457361|ref|XP_001360634.2| GA19635 [Drosophila pseudoobscura pseudoobscura]
gi|198135949|gb|EAL25209.2| GA19635 [Drosophila pseudoobscura pseudoobscura]
Length = 1720
Score = 159 bits (402), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 93/277 (33%), Positives = 148/277 (53%), Gaps = 37/277 (13%)
Query: 30 SSSYN-FLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALY 88
SS N F + + +KV+AD +E+L GV +R+ G++ L+ I L
Sbjct: 1356 SSGVNYFFGEVTVQNKVMADTLEALLGVIVRNYGLQHGFRMLEYFGICKPDVDKPLSQLL 1415
Query: 89 GPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSY 148
+ + A D ++ + LE+ + Y F+D+ +LLQAL+HP++ NR+T Y
Sbjct: 1416 DLQLKSTKMRANASPGDIDGFLINHSYLEQNLGYKFRDRGYLLQALTHPSFPTNRLTGCY 1475
Query: 149 QRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
Q LEF+GDAI+DFL++AY++EN + L PGE++D+RSA+VNN T VR LH +L +
Sbjct: 1476 QELEFIGDAILDFLISAYIFENNNKLRPGELTDLRSALVNNTTLGCICVRHKLHLFILAE 1535
Query: 209 SPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYG----- 263
+ L E +++F + QE++ H +++ + FL+EE+DVQ +
Sbjct: 1536 NALLSETISKFVKFQESQGHRVTNH--------------VRFLLEERDVQPVILDLDEEV 1581
Query: 264 -----------------RVVEYVDVPKALGDVFEALV 283
+ + VDVPKALGDV EAL+
Sbjct: 1582 EMAMENDSGDGPPIGAFNLAQNVDVPKALGDVLEALI 1618
>gi|195443910|ref|XP_002069632.1| GK11626 [Drosophila willistoni]
gi|194165717|gb|EDW80618.1| GK11626 [Drosophila willistoni]
Length = 2281
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/280 (36%), Positives = 145/280 (51%), Gaps = 50/280 (17%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LPQSK--------ID 82
YN + + + DK +AD VE+L G YL CG GA+LF+ L I LP +K I+
Sbjct: 1916 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGIRVLPYTKQTANTLPEIE 1975
Query: 83 VHE----------------ALYG--PHPSAVRCPEQARGLDPLRYI-PECTQLEKRINYT 123
+E +YG P P + P D L ++ + E + Y
Sbjct: 1976 SNEQQRIPGSTKPDSKNTTVVYGKWPTPRSPLLPFAPNASDELEHLLSGFEEFEAILGYR 2035
Query: 124 FQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIR 183
F+D+S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+R
Sbjct: 2036 FRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLR 2095
Query: 184 SAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGI 243
SA+VNN FAS AVR HK H SP L + + RF + Q+ H
Sbjct: 2096 SALVNNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFVRIQQENGH--------------- 2140
Query: 244 VRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
C+ + + D E V+VPKALGDVFE++
Sbjct: 2141 --CISEEYYLLSEEECD----DAEDVEVPKALGDVFESIA 2174
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1749 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1805
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1806 ANLNLYRLGRRKRLGEYMI 1824
>gi|195037032|ref|XP_001989969.1| GH18503 [Drosophila grimshawi]
gi|193894165|gb|EDV93031.1| GH18503 [Drosophila grimshawi]
Length = 2254
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/282 (36%), Positives = 145/282 (51%), Gaps = 60/282 (21%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI-------LPQSKIDVHE 85
YN + + + DK +AD VE+L G YL CG GA+LF+ L + +P + D
Sbjct: 1895 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPYKLVPTAADDERR 1954
Query: 86 A-------------LYGPHPSAVRCPEQARGLDPLRYIPECT-----------QLEKRIN 121
A +YG P+ R P L + P T + E +
Sbjct: 1955 APGTSKPNAKNMVTIYGAWPTP-RSPL-------LHFAPNATVELEHLLSGFEEFEASLG 2006
Query: 122 YTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISD 181
Y F+D+S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D
Sbjct: 2007 YKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTD 2066
Query: 182 IRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEE 241
+RSA+VNN FAS AVR HK+ H SP L + + RF + Q+ H IS
Sbjct: 2067 LRSALVNNTIFASLAVRHGFHKYFRHLSPGLNDVIDRFVRIQQENGHSIS---------- 2116
Query: 242 GIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
EE + ++ E V+VPKALGDVFE++
Sbjct: 2117 -----------EEYYLLSEEECDDAEDVEVPKALGDVFESIA 2147
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1722 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYMTYENVHEGKLSHLRSKQV 1778
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1779 ANLNLYRLGRRKRLGEYMI 1797
>gi|15150411|gb|AAK84929.1| SD01621p [Drosophila melanogaster]
Length = 865
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/276 (35%), Positives = 141/276 (51%), Gaps = 48/276 (17%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI----------------- 75
YN + + + DK +AD VE+L G YL CG GA+LF+ L +
Sbjct: 506 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQR 565
Query: 76 LPQSKIDVHE---ALYGPHPSAVR-----CPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
+P S E +YG P+ P LD L + + E+ + Y F+D+
Sbjct: 566 IPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQL--LSGFEEFEESLGYKFRDR 623
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+V
Sbjct: 624 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 683
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCL 247
NN FAS AVR HK H SP L + + RF + Q+ H C+
Sbjct: 684 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFVRIQQENGH-----------------CI 726
Query: 248 IFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+ + D E V+VPKALGDVFE++
Sbjct: 727 SEEYYLLSEEECD----DAEDVEVPKALGDVFESIA 758
Score = 43.9 bits (102), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 340 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 396
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 397 ANLNLYRLGRRKRLGEYMI 415
>gi|348544424|ref|XP_003459681.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer-like
[Oreochromis niloticus]
Length = 1917
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 103/273 (37%), Positives = 148/273 (54%), Gaps = 41/273 (15%)
Query: 30 SSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALN--ILP---------- 77
S SY+ + DK +AD VE+L G YL SCG A +FL +L +LP
Sbjct: 1561 SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQMFLCSLGLKVLPLERGTLTGAV 1620
Query: 78 ---QSKIDVHEALYGPHPSAVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFL 130
+ V + YG RC P+ R L+ L I EK+INYTF++K++L
Sbjct: 1621 AQVHTHTQVADLCYGWLKIPPRCMLDHPDAERTLNHL--ISGFENFEKKINYTFKNKAYL 1678
Query: 131 LQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNV 190
LQA +H +Y+ N IT YQRLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN
Sbjct: 1679 LQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNT 1738
Query: 191 TFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFF 250
FAS AV+ D HK+ SP L+ + F Q Q +N E +G
Sbjct: 1739 IFASLAVKYDYHKYFKAISPELFHVIDDFVQFQLEKN-----------EMQG-------- 1779
Query: 251 LIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
++ + +++ E ++VPKA+GD+FE+L
Sbjct: 1780 -MDSELRRSEEDEEKEEDIEVPKAMGDIFESLA 1811
>gi|17738129|ref|NP_524453.1| Dicer-1 [Drosophila melanogaster]
gi|51316117|sp|Q9VCU9.1|DCR1_DROME RecName: Full=Endoribonuclease Dcr-1; Short=Protein dicer-1
gi|7300916|gb|AAF56056.1| Dicer-1 [Drosophila melanogaster]
Length = 2249
Score = 158 bits (400), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 99/276 (35%), Positives = 141/276 (51%), Gaps = 48/276 (17%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI----------------- 75
YN + + + DK +AD VE+L G YL CG GA+LF+ L +
Sbjct: 1890 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQR 1949
Query: 76 LPQSKIDVHE---ALYGPHPSAVR-----CPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
+P S E +YG P+ P LD L + + E+ + Y F+D+
Sbjct: 1950 IPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQL--LSGFEEFEESLGYKFRDR 2007
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+V
Sbjct: 2008 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2067
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCL 247
NN FAS AVR HK H SP L + + RF + Q+ H C+
Sbjct: 2068 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFVRIQQENGH-----------------CI 2110
Query: 248 IFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+ + D E V+VPKALGDVFE++
Sbjct: 2111 SEEYYLLSEEECD----DAEDVEVPKALGDVFESIA 2142
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1724 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1780
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1781 ANLNLYRLGRRKRLGEYMI 1799
>gi|194744012|ref|XP_001954492.1| GF18290 [Drosophila ananassae]
gi|190627529|gb|EDV43053.1| GF18290 [Drosophila ananassae]
Length = 2252
Score = 158 bits (399), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 104/276 (37%), Positives = 143/276 (51%), Gaps = 48/276 (17%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LP------------- 77
YN + + + DK +AD VE+L G YL CG GA+LF+ L I LP
Sbjct: 1893 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGIRVLPFTRQPAEQEEAKR 1952
Query: 78 ---QSKIDVHE--ALYGPHPSAVR-----CPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
SK D +YG P+ P LD L + + E + Y F+D+
Sbjct: 1953 VPGSSKSDAEGMVTVYGAWPTPRSPLLHFAPNATGELDQL--LSGFEEFEASLGYKFRDR 2010
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+V
Sbjct: 2011 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2070
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCL 247
NN FAS AVR HK H SP L + + RF + Q+ H IS
Sbjct: 2071 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFVRIQQENGHSIS---------------- 2114
Query: 248 IFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
EE + ++ E V+VPKALGDVFE++
Sbjct: 2115 -----EEYYLLSEEECDDAEDVEVPKALGDVFESIA 2145
Score = 44.3 bits (103), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1728 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1784
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1785 ANLNLYRLGRRKRLGEYMI 1803
>gi|195572986|ref|XP_002104476.1| Dicer-1 [Drosophila simulans]
gi|194200403|gb|EDX13979.1| Dicer-1 [Drosophila simulans]
Length = 1533
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 102/276 (36%), Positives = 142/276 (51%), Gaps = 48/276 (17%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI----------------- 75
YN + + + DK +AD VE+L G YL CG GA+LF+ L +
Sbjct: 1174 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQR 1233
Query: 76 LPQSKIDVHE---ALYGPHPSAVR-----CPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
+P S E +YG P+ P LD L + + E+ + Y F+D+
Sbjct: 1234 IPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQL--LSGFEEFEESLGYKFRDR 1291
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+V
Sbjct: 1292 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 1351
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCL 247
NN FAS AVR HK H SP L + + RF + Q+ H IS+E E C
Sbjct: 1352 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFVRIQQENGHSISEEYYLLSE----EEC- 1406
Query: 248 IFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
E V+VPKALGDVFE++
Sbjct: 1407 ----------------DDAEDVEVPKALGDVFESIA 1426
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1008 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1064
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1065 ANLNLYRLGRRKRLGEYMI 1083
>gi|240247227|emb|CAX68236.1| dicer-1 [Blattella germanica]
Length = 2271
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 112/289 (38%), Positives = 154/289 (53%), Gaps = 59/289 (20%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LPQSKI-------DV 83
YN + + + DK VAD VE+L G YL +CG GA+LF+ L I LP+ ++ +V
Sbjct: 1897 YNLITQHSIPDKSVADCVEALIGAYLIACGPRGALLFMAWLGICVLPKEEVIFSMPCAEV 1956
Query: 84 HEALYGPHPSAVR---------C--PEQAR--GLDP-----LRYI--PECT--------- 114
E ++V+ C +Q R L P LR + PE
Sbjct: 1957 KEIRPVGSTTSVQINGDNTETSCLQWKQVRYGNLKPPRSPLLRSVSNPEAELRRLLDGYD 2016
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
E+RI Y F+D+S+LLQ+L+H +Y+ NR+T YQRLEFLGDA++D+L+T +LYE+
Sbjct: 2017 VFERRIRYKFRDRSYLLQSLTHASYSPNRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQH 2076
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEE 234
SPG ++D+RSA+VNN FAS AVR HK+ H SP L E V RF + QE H IS
Sbjct: 2077 SPGALTDLRSALVNNTIFASLAVRYGFHKYFRHLSPGLNEVVDRFVRIQEENGHTIS--- 2133
Query: 235 EEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
EE + + E V+VPKALGDVFE++
Sbjct: 2134 ------------------EEYYLIEEEECEEAEDVEVPKALGDVFESVA 2164
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 3/71 (4%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ N + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1727 SVILQALTMSNANDG---INLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSHLRSKQV 1783
Query: 188 NNVTFASYAVR 198
+N+ R
Sbjct: 1784 SNLNLYRLGRR 1794
>gi|195502701|ref|XP_002098342.1| GE24009 [Drosophila yakuba]
gi|194184443|gb|EDW98054.1| GE24009 [Drosophila yakuba]
Length = 2250
Score = 157 bits (398), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 99/276 (35%), Positives = 143/276 (51%), Gaps = 48/276 (17%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNIL---------------- 76
YN + + + DK +AD VE+L G YL CG GA+LF+ L +
Sbjct: 1891 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDEASQEHR 1950
Query: 77 --------PQSKIDVHEALYGPHPSAVR-CPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
P++ + V+ A P + P LD L + + E+ + Y F+D+
Sbjct: 1951 IPGSTKPNPENMVTVYGAWPTPRSPLLHFAPNATEELDQL--LSGFDEFEESLGYKFRDR 2008
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+V
Sbjct: 2009 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2068
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCL 247
NN FAS AVR HK H SP L + + RF + Q+ H IS
Sbjct: 2069 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFVRIQQENGHSIS---------------- 2112
Query: 248 IFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
EE + ++ E V+VPKALGDVFE++
Sbjct: 2113 -----EEYYLLSEEECDDAEDVEVPKALGDVFESIA 2143
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1725 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1781
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1782 ANLNLYRLGRRKRLGEYMI 1800
>gi|194910778|ref|XP_001982226.1| GG12488 [Drosophila erecta]
gi|190656864|gb|EDV54096.1| GG12488 [Drosophila erecta]
Length = 2249
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 103/282 (36%), Positives = 147/282 (52%), Gaps = 60/282 (21%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LP------------- 77
YN + + + DK +AD VE+L G YL CG GA+LF+ L + LP
Sbjct: 1890 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLEGANQEHR 1949
Query: 78 ---QSKIDVHE--ALYGPHPSAVRCPEQARGLDPLRYIPECTQ-----------LEKRIN 121
+K +V + +YG P+ R P L + P T+ E+ +
Sbjct: 1950 IPGSTKPNVEKMVTVYGAWPTP-RSPL-------LHFAPNATEELDHLLSGFEVFEESLG 2001
Query: 122 YTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISD 181
Y F+D+S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D
Sbjct: 2002 YKFRDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTD 2061
Query: 182 IRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEE 241
+RSA+VNN FAS AVR HK H SP L + + RF + Q+ H IS
Sbjct: 2062 LRSALVNNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFVRIQQENGHSIS---------- 2111
Query: 242 GIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
EE + ++ E V+VPKALGDVFE++
Sbjct: 2112 -----------EEYYLLSEEECDDAEDVEVPKALGDVFESIA 2142
Score = 44.3 bits (103), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1724 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1780
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1781 ANLNLYRLGRRKRLGEYMI 1799
>gi|195331135|ref|XP_002032258.1| GM23619 [Drosophila sechellia]
gi|194121201|gb|EDW43244.1| GM23619 [Drosophila sechellia]
Length = 2249
Score = 157 bits (397), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 101/276 (36%), Positives = 143/276 (51%), Gaps = 48/276 (17%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI----------------- 75
YN + + + DK +AD VE+L G YL CG GA+LF+ L +
Sbjct: 1890 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDAGNQEQR 1949
Query: 76 LPQSKIDVHE---ALYGPHPSAVR-----CPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
+P S E +YG P+ P LD L + + E+ + Y F+D+
Sbjct: 1950 IPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQL--LSGFEEFEESLGYKFRDR 2007
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+V
Sbjct: 2008 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2067
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCL 247
NN FAS AVR HK H SP L + + RF + Q+ H IS
Sbjct: 2068 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFVRIQQENGHSIS---------------- 2111
Query: 248 IFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
EE + ++ E V+VPKALGDVFE++
Sbjct: 2112 -----EEYYLLSEEECDDAEDVEVPKALGDVFESIA 2142
Score = 43.9 bits (102), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1724 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1780
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1781 ANLNLYRLGRRKRLGEYMI 1799
>gi|195143531|ref|XP_002012751.1| GL23778 [Drosophila persimilis]
gi|194101694|gb|EDW23737.1| GL23778 [Drosophila persimilis]
Length = 2278
Score = 157 bits (396), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 104/276 (37%), Positives = 145/276 (52%), Gaps = 48/276 (17%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LPQSKIDVHEA---- 86
YN + + + DK +AD VE+L G YL CG GA+LF+ L + LP S+ +
Sbjct: 1919 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPYSRQPAPASDSER 1978
Query: 87 --------------LYGPHPSAVR-----CPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
+YG P+ P R L+ L + + E + Y F+D+
Sbjct: 1979 TPGSTTPDAKQMVTVYGSWPTPRSPLLHYAPNAERELEHL--LSGFEEFEASLGYRFRDR 2036
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+V
Sbjct: 2037 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2096
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCL 247
NN FAS AVR HK H SP L + + RF + Q+ H IS+E EEE C
Sbjct: 2097 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFVRIQQENGHSISEEYYLLSEEE----C- 2151
Query: 248 IFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
E V+VPKALGDVFE++
Sbjct: 2152 ----------------DDAEDVEVPKALGDVFESIA 2171
Score = 43.5 bits (101), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1748 SVILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1804
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1805 ANLNLYRLGRRKRLGEYMI 1823
>gi|125773725|ref|XP_001358121.1| GA18437 [Drosophila pseudoobscura pseudoobscura]
gi|54637856|gb|EAL27258.1| GA18437 [Drosophila pseudoobscura pseudoobscura]
Length = 2280
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 104/276 (37%), Positives = 145/276 (52%), Gaps = 48/276 (17%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LPQSKIDVHEA---- 86
YN + + + DK +AD VE+L G YL CG GA+LF+ L + LP S+ +
Sbjct: 1921 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPYSRQPAPASDSER 1980
Query: 87 --------------LYGPHPSAVR-----CPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
+YG P+ P R L+ L + + E + Y F+D+
Sbjct: 1981 TPGSTTPDAKQMVTVYGSWPTPRSPLLHYAPNAERELEHL--LSGFEEFEASLGYRFRDR 2038
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+V
Sbjct: 2039 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2098
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCL 247
NN FAS AVR HK H SP L + + RF + Q+ H IS+E EEE C
Sbjct: 2099 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRFVRIQQENGHSISEEYYLLSEEE----C- 2153
Query: 248 IFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
E V+VPKALGDVFE++
Sbjct: 2154 ----------------DDAEDVEVPKALGDVFESIA 2173
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1750 SVILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1806
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1807 ANLNLYRLGRRKRLGEYMI 1825
>gi|388330447|gb|AFK29469.1| Dicer1 [Locusta migratoria]
Length = 2324
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 118/322 (36%), Positives = 161/322 (50%), Gaps = 72/322 (22%)
Query: 9 FDLYQDPTEDGKKVSSPE-----KLPS-SSYNFLDRIKLGDKVVADVVESLTGVYLRSCG 62
F +D EDG S + K+P YN + + + DK VAD VE+L G YL +CG
Sbjct: 1921 FQRCKDCDEDGMPTQSEDYDSVDKMPCFIPYNLITQHSIPDKSVADCVEALIGAYLIACG 1980
Query: 63 IEGAMLFLQALNI--LPQSKIDVH--------------------------------EALY 88
GA+LF+ L I LP+ +I + + Y
Sbjct: 1981 PRGALLFMAWLGICVLPREEIILKTSSRNAVPKERPVGSLKPTFVYEDSDGTAVWKQVRY 2040
Query: 89 GP--HPSA-----VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNA 141
G PS+ V PE R L+ L + E++I Y F+D+S+LLQ+L+H +Y+
Sbjct: 2041 GTLQSPSSPLLRNVSNPE--RKLEAL--LDGFDVFEQKIQYKFRDRSYLLQSLTHASYSP 2096
Query: 142 NRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+VNN FAS AVR
Sbjct: 2097 NRLTDCYQRLEFLGDAVLDYLITRHLYEDSRQHSPGALTDLRSALVNNTIFASLAVRYGF 2156
Query: 202 HKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDV 261
HK H SP L E V RF + QE H IS EE + +
Sbjct: 2157 HKFFRHLSPGLNEVVDRFVRIQEENGHTIS---------------------EEYYLIEEE 2195
Query: 262 YGRVVEYVDVPKALGDVFEALV 283
E V+VPKALGDVFE++
Sbjct: 2196 ECEEAEDVEVPKALGDVFESVA 2217
Score = 43.9 bits (102), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 122 YTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISD 181
+T S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S
Sbjct: 1778 HTGPSPSIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYCTYDNIHEGKLSH 1834
Query: 182 IRSAMVNNVTF 192
+RS V+N+
Sbjct: 1835 LRSKQVSNLNL 1845
>gi|405960420|gb|EKC26346.1| Endoribonuclease Dicer [Crassostrea gigas]
Length = 1759
Score = 157 bits (396), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 98/259 (37%), Positives = 141/259 (54%), Gaps = 32/259 (12%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ--ALNILPQSKIDVHE----- 85
YN + DK +AD VESL G YL SCG + A+ F+ L +LPQ K + +
Sbjct: 1420 YNLQTLHSIPDKSIADCVESLIGCYLTSCGKKAALKFMHWLGLKVLPQKKKGMVQDTELL 1479
Query: 86 ALYGP-HPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRI 144
+L P P V P+ L R + LE++I Y F+DKS+LLQA +H +Y+ N +
Sbjct: 1480 SLQCPDSPLLVHVPDHNSILH--RLLEGYDTLEQKIGYEFRDKSYLLQAFTHASYHYNTV 1537
Query: 145 TTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKH 204
T YQRLEFLGDAI+D+++T +LYE+ SPG ++D+RSA+VNN FA+ AV+ D HK+
Sbjct: 1538 TDCYQRLEFLGDAILDYVITRHLYEDSCKYSPGVLTDLRSALVNNNIFAALAVKWDFHKY 1597
Query: 205 LLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGR 264
SP L+ + +F Q+ R E I+ D + +
Sbjct: 1598 FKAISPPLFGVIEKFVARQKEREDE----------------------IDLSDDEGEGEEE 1635
Query: 265 VVEYVDVPKALGDVFEALV 283
++VPKALGD+FE+L
Sbjct: 1636 EHVELEVPKALGDIFESLA 1654
>gi|241061228|ref|XP_002408100.1| dicer-1, putative [Ixodes scapularis]
gi|215492369|gb|EEC02010.1| dicer-1, putative [Ixodes scapularis]
Length = 2050
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 100/262 (38%), Positives = 143/262 (54%), Gaps = 30/262 (11%)
Query: 29 PSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ--ALNILPQSKI----- 81
P YN L + + DK +AD VE+L G YL SCG +LF+ L +LP+ +
Sbjct: 1705 PYVPYNLLTQHSIPDKSIADCVEALIGAYLVSCGPRATLLFMSWLGLEVLPRDRTAEALR 1764
Query: 82 DVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNA 141
DV LY S + P+ L L + E RI Y F+D+++LLQA +H +Y+
Sbjct: 1765 DVSAPLYRTLESPLVSPDDGSALAQL--LSGYDAFEARIGYRFRDRAYLLQAFTHASYHY 1822
Query: 142 NRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
NR+T YQRLEFLGDA++D+L+T +LY++ SPG ++D+RSA+VNN FAS AV+ D
Sbjct: 1823 NRLTDCYQRLEFLGDAVLDYLITRHLYDDPQRHSPGTLTDLRSALVNNTFFASLAVKYDF 1882
Query: 202 HKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDV 261
H++ + SP L+ + RF E + H SD F EK +
Sbjct: 1883 HRYFKNVSPGLFAVIQRFV---ETKCH--SDG----------------FRYHEKYYLEEE 1921
Query: 262 YGRVVEYVDVPKALGDVFEALV 283
E V+VPKALGD+FE++
Sbjct: 1922 ECEEAEEVEVPKALGDIFESVA 1943
Score = 41.2 bits (95), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 121 NYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEIS 180
+++ S LLQAL+ NAN + +RLE +GD+ + + VTA+LY + G++S
Sbjct: 1544 SHSGPSPSILLQALT--MSNAND-GINLERLETVGDSFLKYAVTAHLYCTHPSVHEGKLS 1600
Query: 181 DIRSAMVNNVTF 192
+RS ++N+
Sbjct: 1601 HLRSRQISNLNL 1612
>gi|195391256|ref|XP_002054279.1| GJ24359 [Drosophila virilis]
gi|194152365|gb|EDW67799.1| GJ24359 [Drosophila virilis]
Length = 2250
Score = 156 bits (395), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 101/282 (35%), Positives = 145/282 (51%), Gaps = 60/282 (21%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LP------------- 77
YN + + + DK +AD VE+L G YL CG GA+LF+ L + LP
Sbjct: 1891 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPYKLEPTAAAIEQR 1950
Query: 78 ---QSKIDVHE--ALYGPHPSAVRCPEQARGLDPLRYIPECT-----------QLEKRIN 121
+K D++ +YG P+ R P L + P + E +
Sbjct: 1951 MPGSTKPDLNNMITVYGDWPTP-RSPL-------LHFAPNANAELEHLLSGFEEFESSLG 2002
Query: 122 YTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISD 181
YTF D+S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D
Sbjct: 2003 YTFSDRSYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTD 2062
Query: 182 IRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEE 241
+RSA+VNN FAS AVR HK+ H SP L + + RF + Q+ H
Sbjct: 2063 LRSALVNNTIFASLAVRHGFHKYFRHLSPGLNDVIDRFVRIQQENGH------------- 2109
Query: 242 GIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+ EE + ++ E V+VPKALGDVFE++
Sbjct: 2110 --------IISEEYYLLSEEECDDAEDVEVPKALGDVFESIA 2143
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1718 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1774
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1775 ANLNLYRLGRRKRLGEYMI 1793
>gi|198421916|ref|XP_002122382.1| PREDICTED: similar to rCG20888 [Ciona intestinalis]
Length = 2053
Score = 156 bits (395), Expect = 9e-36, Method: Compositional matrix adjust.
Identities = 98/258 (37%), Positives = 144/258 (55%), Gaps = 28/258 (10%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQ--ALNILPQ-------SKIDVHEALYGPH 91
L DK +AD VE+L G YL +CG A L L LN+LP+ +D L P
Sbjct: 1707 LADKSIADCVEALLGAYLTTCGHRSAQLLLCHLGLNVLPKVAQAETSKTVDRFGYLTPPT 1766
Query: 92 PSAVRC-PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQR 150
+ C P Q LD L + + E++INYTF++K++LLQA +H +Y N +T YQR
Sbjct: 1767 NKMLECRPNQQNKLDQL--LVALSGFERKINYTFKNKAYLLQAFTHASYYYNTVTDCYQR 1824
Query: 151 LEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSP 210
LEFLGDA++DFL+T +L+ + H SPG ++D+RSA+VNN FAS AV D HK+ SP
Sbjct: 1825 LEFLGDAVLDFLITRHLFNDERHHSPGALTDLRSALVNNTIFASLAVHYDFHKYFKSISP 1884
Query: 211 RLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLI-----FFLIEEKDVQTDVYGRV 265
L+ + F Q +++E+ +G+ L+ ++ ++ D
Sbjct: 1885 ELHHIIEDFVMYQ-----------QKQEDAQGMDAHLMRDYDRVEIVAPSSLEKDEEEGE 1933
Query: 266 VEYVDVPKALGDVFEALV 283
E V+VPKALGD+FE++
Sbjct: 1934 NEDVEVPKALGDIFESVA 1951
>gi|327259078|ref|XP_003214365.1| PREDICTED: endoribonuclease Dicer-like isoform 1 [Anolis
carolinensis]
Length = 1918
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 162/314 (51%), Gaps = 66/314 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ + + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1523 FWNPSEENCGIDAGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1580
Query: 72 ALN--ILPQ-SKIDVHEALYG---------PHPSA------------------------- 94
+L +LP KID ALY H SA
Sbjct: 1581 SLGLKVLPVIKKIDWDSALYSHTEHFNSQQKHSSANCISVSLSNQESSRYKDLVYGCLKI 1640
Query: 95 -VRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
RC P+ R L+ L I EK+INY+F++K++LLQA +H +Y+ N IT YQ
Sbjct: 1641 PPRCMFDHPDAERTLNHL--ISGFENFEKKINYSFKNKAYLLQAFTHASYHYNTITDCYQ 1698
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ S
Sbjct: 1699 RLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVS 1758
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + F Q Q +N E +G ++ + +++ E +
Sbjct: 1759 PELFHVIDDFVQFQMEKN-----------EMQG---------MDSELRRSEEDEEKEEDI 1798
Query: 270 DVPKALGDVFEALV 283
+VPKA+GD+FE+L
Sbjct: 1799 EVPKAMGDIFESLA 1812
>gi|355683929|gb|AER97238.1| dicer 1, ribonuclease type III [Mustela putorius furo]
Length = 560
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 157/312 (50%), Gaps = 62/312 (19%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 166 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 223
Query: 72 ALN--ILPQSKIDVHEALYGP----------HPSAVRCPEQARG----------LDPLRY 109
+L +LP + E GP + S R P A G L+
Sbjct: 224 SLGLKVLPVIRRTGREKAVGPPRENSSSQQKNLSGSRAPASAAGSRSSVLRDLEYGCLKI 283
Query: 110 IPECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRL 151
P C EK+INY F++K++LLQA +H +Y+ N IT YQRL
Sbjct: 284 PPRCMFDHPDADKTLNHLISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRL 343
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPR 211
EFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP
Sbjct: 344 EFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPE 403
Query: 212 LYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDV 271
L+ + F Q Q +N E +G ++ + +++ E ++V
Sbjct: 404 LFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDIEV 443
Query: 272 PKALGDVFEALV 283
PKA+GD+FE+L
Sbjct: 444 PKAMGDIFESLA 455
>gi|270015102|gb|EFA11550.1| dicer-1 [Tribolium castaneum]
Length = 1835
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 146/260 (56%), Gaps = 40/260 (15%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LPQSKIDVHEALYG- 89
YN + + + DK +AD VE+L G YL CG GA+LF+ L I LPQ + + YG
Sbjct: 1498 YNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGIRVLPQ----LEDGTYGE 1553
Query: 90 ------PHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANR 143
P + + P + LD L + Q E+ I Y F+D+S+LLQAL+H +++ N
Sbjct: 1554 IELPKSPLSNHLTYPREE--LDML--LDGYDQFERHIGYKFRDRSYLLQALTHASFSPNT 1609
Query: 144 ITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHK 203
+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+VNN FAS AVR H+
Sbjct: 1610 LTDCYQRLEFLGDAVLDYLITRHLYEDTRMHSPGALTDLRSALVNNTIFASLAVRNGFHR 1669
Query: 204 HLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYG 263
+ + SP L E V +F + QE H + DE +L+ E +
Sbjct: 1670 YFRNLSPSLNEVVEKFVRLQEDSGHTLVDE---------------LYLVVETEEVE---- 1710
Query: 264 RVVEYVDVPKALGDVFEALV 283
V+VPKALGDVFE++
Sbjct: 1711 ----DVEVPKALGDVFESVA 1726
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 130 LLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
LLQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V+N
Sbjct: 1355 LLQALT--MSNAND-GINLERLETIGDSFLKYAITNYLYSKYENVHEGKLSHLRSKQVSN 1411
Query: 190 VTFASYAVRLDLHKHLL 206
+ R L ++++
Sbjct: 1412 LNLYRLGRRKGLGEYMI 1428
>gi|80979089|gb|ABB54747.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID------ 82
SS NF + + + +KV+AD +E+L GV +++ G++ A L+ I ++ ID
Sbjct: 1342 SSEVNFCVGLVTIPNKVIADTLEALLGVIVKNYGLQHAFKMLEYFKIC-RADIDKPLTQL 1400
Query: 83 VHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNAN 142
++ L G A + G ++ + LEK + YTF+D+ +LLQAL+HP+Y N
Sbjct: 1401 LNLELGGKKMRANVNTTEIDG-----FLINHSYLEKNLGYTFKDRRYLLQALTHPSYPTN 1455
Query: 143 RITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLH 202
RIT SYQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH
Sbjct: 1456 RITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLH 1515
Query: 203 KHLLHDSPRLYENVTRFAQNQEARNHEIS-------------------DEEEEEEEEEGI 243
+L ++ +L E +++F QE++ H ++ D+E + E
Sbjct: 1516 FFILAENAKLSEIISKFVNFQESQGHRVTNYVRILLEEADVQPTPLDLDDELDMTELPHA 1575
Query: 244 VRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+C+ EK V + VDVPKALGDV EAL+
Sbjct: 1576 NKCIS--QEAEKGVPPKGEFNMSTNVDVPKALGDVLEALI 1613
>gi|80979099|gb|ABB54752.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID------ 82
SS NF + + + +KV+AD +E+L GV +++ G++ A L+ I ++ ID
Sbjct: 1342 SSEVNFCVGLVTIPNKVIADTLEALLGVIVKNYGLQHAFKMLEYFKIC-RADIDKPLTQL 1400
Query: 83 VHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNAN 142
++ L G A + G ++ + LEK + YTF+D+ +LLQAL+HP+Y N
Sbjct: 1401 LNLELGGKKMRANVNTTEIDG-----FLINHSYLEKNLGYTFKDRRYLLQALTHPSYPTN 1455
Query: 143 RITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLH 202
RIT SYQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH
Sbjct: 1456 RITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLH 1515
Query: 203 KHLLHDSPRLYENVTRFAQNQEARNHEIS-------------------DEEEEEEEEEGI 243
+L ++ +L E +++F QE++ H ++ D+E + E
Sbjct: 1516 FFILAENAKLSEIISKFVNFQESQGHRVTNYVRILLEEADVQPTPLDLDDELDMTELPHA 1575
Query: 244 VRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+C+ EK V + VDVPKALGDV EAL+
Sbjct: 1576 NKCIS--QEAEKGVPPKGEFNMSTNVDVPKALGDVLEALI 1613
>gi|327259080|ref|XP_003214366.1| PREDICTED: endoribonuclease Dicer-like isoform 2 [Anolis
carolinensis]
Length = 1915
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 111/314 (35%), Positives = 162/314 (51%), Gaps = 66/314 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ + + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1520 FWNPSEENCGIDAGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1577
Query: 72 ALN--ILPQ-SKIDVHEALYG---------PHPSA------------------------- 94
+L +LP KID ALY H SA
Sbjct: 1578 SLGLKVLPVIKKIDWDSALYSHTEHFNSQQKHSSANCISVSLSNQESSRYKDLVYGCLKI 1637
Query: 95 -VRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
RC P+ R L+ L I EK+INY+F++K++LLQA +H +Y+ N IT YQ
Sbjct: 1638 PPRCMFDHPDAERTLNHL--ISGFENFEKKINYSFKNKAYLLQAFTHASYHYNTITDCYQ 1695
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ S
Sbjct: 1696 RLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVS 1755
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + F Q Q +N E +G ++ + +++ E +
Sbjct: 1756 PELFHVIDDFVQFQMEKN-----------EMQG---------MDSELRRSEEDEEKEEDI 1795
Query: 270 DVPKALGDVFEALV 283
+VPKA+GD+FE+L
Sbjct: 1796 EVPKAMGDIFESLA 1809
>gi|80979091|gb|ABB54748.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID------ 82
SS NF + + + +KV+AD +E+L GV +++ G++ A L+ I ++ ID
Sbjct: 1342 SSEVNFCVGLVTIPNKVIADTLEALLGVIVKNYGLQHAFKMLEYFKIC-RADIDKPLTQL 1400
Query: 83 VHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNAN 142
++ L G A + G ++ + LEK + YTF+D+ +LLQAL+HP+Y N
Sbjct: 1401 LNLELGGKKMRANVNTTEIDG-----FLINHSYLEKNLGYTFKDRRYLLQALTHPSYPTN 1455
Query: 143 RITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLH 202
RIT SYQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH
Sbjct: 1456 RITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLH 1515
Query: 203 KHLLHDSPRLYENVTRFAQNQEARNHEIS-------------------DEEEEEEEEEGI 243
+L ++ +L E +++F QE++ H ++ D+E + E
Sbjct: 1516 FFILAENAKLSEIISKFVNFQESQGHRVTNYVRILLEEADVQPTPLDLDDELDMTELPHA 1575
Query: 244 VRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+C+ EK V + VDVPKALGDV EAL+
Sbjct: 1576 NKCIS--QEAEKGVPPKGEFNMSTNVDVPKALGDVLEALI 1613
>gi|189234048|ref|XP_968993.2| PREDICTED: Dicer-1 [Tribolium castaneum]
Length = 1865
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/260 (39%), Positives = 146/260 (56%), Gaps = 40/260 (15%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LPQSKIDVHEALYG- 89
YN + + + DK +AD VE+L G YL CG GA+LF+ L I LPQ + + YG
Sbjct: 1528 YNLVTQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGIRVLPQ----LEDGTYGE 1583
Query: 90 ------PHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANR 143
P + + P + LD L + Q E+ I Y F+D+S+LLQAL+H +++ N
Sbjct: 1584 IELPKSPLSNHLTYPREE--LDML--LDGYDQFERHIGYKFRDRSYLLQALTHASFSPNT 1639
Query: 144 ITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHK 203
+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+VNN FAS AVR H+
Sbjct: 1640 LTDCYQRLEFLGDAVLDYLITRHLYEDTRMHSPGALTDLRSALVNNTIFASLAVRNGFHR 1699
Query: 204 HLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYG 263
+ + SP L E V +F + QE H + DE +L+ E +
Sbjct: 1700 YFRNLSPSLNEVVEKFVRLQEDSGHTLVDE---------------LYLVVETEEVE---- 1740
Query: 264 RVVEYVDVPKALGDVFEALV 283
V+VPKALGDVFE++
Sbjct: 1741 ----DVEVPKALGDVFESVA 1756
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 3/77 (3%)
Query: 130 LLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
LLQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V+N
Sbjct: 1385 LLQALT--MSNAND-GINLERLETIGDSFLKYAITNYLYSKYENVHEGKLSHLRSKQVSN 1441
Query: 190 VTFASYAVRLDLHKHLL 206
+ R L ++++
Sbjct: 1442 LNLYRLGRRKGLGEYMI 1458
>gi|80979097|gb|ABB54751.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID------ 82
SS NF + + + +KV+AD +E+L GV +++ G++ A L+ I ++ ID
Sbjct: 1342 SSEVNFCVGLVTIPNKVIADTLEALLGVIVKNYGLQHAFKMLEYFKIC-RADIDKPLTQL 1400
Query: 83 VHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNAN 142
++ L G A + G ++ + LEK + YTF+D+ +LLQAL+HP+Y N
Sbjct: 1401 LNLELGGKKMRANVNTTEIDG-----FLINHSYLEKNLGYTFKDRRYLLQALTHPSYPTN 1455
Query: 143 RITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLH 202
RIT SYQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH
Sbjct: 1456 RITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLH 1515
Query: 203 KHLLHDSPRLYENVTRFAQNQEARNHEIS-------------------DEEEEEEEEEGI 243
+L ++ +L E +++F QE++ H ++ D+E + E
Sbjct: 1516 FFILAENAKLSEIISKFVNFQESQGHRVTNYVRILLEEADVQPTPLDLDDELDMTELPHA 1575
Query: 244 VRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+C+ EK V + VDVPKALGDV EAL+
Sbjct: 1576 NKCIS--QEAEKGVPPKGEFNMSTNVDVPKALGDVLEALI 1613
>gi|80979093|gb|ABB54749.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID------ 82
SS NF + + + +KV+AD +E+L GV +++ G++ A L+ I ++ ID
Sbjct: 1342 SSEVNFCVGLVTIPNKVIADTLEALLGVIVKNYGLQHAFKMLEYFKIC-RADIDKPLTQL 1400
Query: 83 VHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNAN 142
++ L G A + G ++ + LEK + YTF+D+ +LLQAL+HP+Y N
Sbjct: 1401 LNLELGGKKMRANVNTTEIDG-----FLINHSYLEKNLGYTFKDRRYLLQALTHPSYPTN 1455
Query: 143 RITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLH 202
RIT SYQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH
Sbjct: 1456 RITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLH 1515
Query: 203 KHLLHDSPRLYENVTRFAQNQEARNHEIS-------------------DEEEEEEEEEGI 243
+L ++ +L E +++F QE++ H ++ D+E + E
Sbjct: 1516 FFILAENAKLSEIISKFVNFQESQGHRVTNYVRILLEEADVQPTPLDLDDELDMTELPHA 1575
Query: 244 VRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+C+ EK V + VDVPKALGDV EAL+
Sbjct: 1576 NKCIS--QEAEKGVPPKGEFNMSTNVDVPKALGDVLEALI 1613
>gi|80979085|gb|ABB54745.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 157/280 (56%), Gaps = 34/280 (12%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID------ 82
SS NF + + + +KV+AD +E+L GV +++ G++ A L+ I ++ ID
Sbjct: 1342 SSEVNFCVGLVTIPNKVIADTLEALLGVIVKNYGLQHAFKMLEYFKIC-RADIDKPLTQL 1400
Query: 83 VHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNAN 142
++ L G A + G ++ + LEK + YTF+D+ +LLQAL+HP+Y N
Sbjct: 1401 LNLELGGKKMRANVNTTEIDG-----FLINHSYLEKNLGYTFKDRRYLLQALTHPSYPTN 1455
Query: 143 RITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLH 202
RIT SYQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH
Sbjct: 1456 RITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLH 1515
Query: 203 KHLLHDSPRLYENVTRFAQNQEARNHEIS-------------------DEEEEEEEEEGI 243
+L ++ +L E +++F QE++ H ++ D+E + E
Sbjct: 1516 FFILAENAKLSEIISKFVNFQESQGHRVTNYVRILLEEADVQPTPLDLDDELDMTELPHA 1575
Query: 244 VRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+C+ EK V + VDVPKALGDV EAL+
Sbjct: 1576 NKCIS--QEAEKGVPPKGEFNMSTNVDVPKALGDVLEALI 1613
>gi|57236094|gb|AAW48724.1| dicer-1 [Aedes aegypti]
Length = 2192
Score = 155 bits (393), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 102/278 (36%), Positives = 146/278 (52%), Gaps = 51/278 (18%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LPQSKIDVHE----- 85
YN + + + DK VAD VE+L G YL CG GA+L + L I LP ++ E
Sbjct: 1832 YNLVTQHSIPDKSVADCVEALIGAYLIECGPRGALLLMAWLGIRVLPVYEVPYDENNPKV 1891
Query: 86 ---------------ALYG-----PHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQ 125
++YG P + P + L+ L + + E + Y
Sbjct: 1892 PGSSQRYEKDGIAMQSVYGYWVPPKSPLLMYAPNPQQTLEHL--LDGYSAFEDSLGY-HH 1948
Query: 126 DKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSA 185
+S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA
Sbjct: 1949 SRSYLLQAMTHASYCPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSA 2008
Query: 186 MVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVR 245
+VNN FAS AVR D HK+ H SP L + + RF + Q+ H IS+E
Sbjct: 2009 LVNNTIFASLAVRHDFHKYFRHLSPGLNDVIDRFVRIQQDNGHIISEE------------ 2056
Query: 246 CLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
++LI E + E V+VPKALGDVFE++
Sbjct: 2057 ---YYLISEDECDE------AEDVEVPKALGDVFESVA 2085
Score = 43.9 bits (102), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 47/86 (54%), Gaps = 3/86 (3%)
Query: 121 NYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEIS 180
N+ S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S
Sbjct: 1648 NHPGPSPSIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYCTYENVHEGKLS 1704
Query: 181 DIRSAMVNNVTFASYAVRLDLHKHLL 206
+RS V+N+ R L + ++
Sbjct: 1705 HLRSKQVSNLNLYRLGRRKVLGESMI 1730
>gi|80979119|gb|ABB54762.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 94/277 (33%), Positives = 154/277 (55%), Gaps = 28/277 (10%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALY 88
S+ NF + + + DKV+AD +E+L GV +++ G++ A L+ I + D+ + L
Sbjct: 1346 SAEVNFCVGLVTIPDKVIADTLEALLGVIVKNYGLQHAFRMLEYFKI---CRADIGKPLT 1402
Query: 89 GP-----HPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANR 143
S +R +D ++ LE + YTF+D+ +LLQAL+HP++ NR
Sbjct: 1403 QLLDLELGGSKMRANVNTTEIDG--FLINHHHLENNLGYTFKDRGYLLQALTHPSFPTNR 1460
Query: 144 ITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHK 203
IT YQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH
Sbjct: 1461 ITGCYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHF 1520
Query: 204 HLLHDSPRLYENVTRFAQNQEARNHEISDE-----EEEEEEEEGIVRCLIFFLIEEKDVQ 258
+L ++ +L E++ +F Q QE++ H +++ EE + + + + E K+
Sbjct: 1521 FILAENAKLAESIAKFVQFQESQRHRVTNHVRILLEEADVQSTTLDLDDDLDMTELKNAL 1580
Query: 259 TDVYG------------RVVEYVDVPKALGDVFEALV 283
+ + VDVPKALGDV EAL+
Sbjct: 1581 KSISHEEEKNDPPKGDFNMSTNVDVPKALGDVLEALI 1617
>gi|326920976|ref|XP_003206741.1| PREDICTED: endoribonuclease Dicer-like [Meleagris gallopavo]
Length = 1921
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 158/314 (50%), Gaps = 66/314 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1526 FWNPSEENCGVDAGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1583
Query: 72 ALN--ILPQSKIDVHEALYGPHPSAVRCPEQARGLDP----------------------L 107
+L +LP K E+ P+ C + + L P L
Sbjct: 1584 SLGLKVLPVIKKSDWESTLC--PTGENCNSEQKNLSPNSVSACIVNSEPFLYKDLEYGCL 1641
Query: 108 RYIPECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
+ P C EK+INY+F++K++LLQA +H +Y+ N IT YQ
Sbjct: 1642 KIPPRCMFDHPDAEKTLNHLISGFENFEKKINYSFKNKAYLLQAFTHASYHYNTITDCYQ 1701
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ S
Sbjct: 1702 RLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVS 1761
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + F Q Q +N E +G ++ + +++ E +
Sbjct: 1762 PELFHVIDDFVQFQMEKN-----------EMQG---------MDSELRRSEEDEEKEEDI 1801
Query: 270 DVPKALGDVFEALV 283
+VPKA+GD+FE+L
Sbjct: 1802 EVPKAMGDIFESLA 1815
>gi|80979115|gb|ABB54760.1| Dicer-2 [Drosophila simulans]
Length = 1714
Score = 155 bits (392), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/274 (36%), Positives = 158/274 (57%), Gaps = 25/274 (9%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID--VHEA 86
SS NF + + + +KV+AD +E+L GV +++ G++ A L+ I +S ID + E
Sbjct: 1344 SSEVNFCVGLVAIANKVIADTLEALLGVIVKNYGLQHAFKMLEYFKIC-RSDIDKPLTEL 1402
Query: 87 LYGPHPSA-VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRIT 145
L S +R +D ++ + LE + YTF+D+ +LLQAL+HP+Y NRIT
Sbjct: 1403 LNLELGSKNIRANVNTTEIDG--FLINHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRIT 1460
Query: 146 TSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
SYQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH +
Sbjct: 1461 GSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFI 1520
Query: 206 LHDSPRLYENVTRFAQNQEARNHEISD------EE----------EEEEEEEGIVRCLIF 249
L ++ +L E +++F QE++ H +++ EE ++E E +C+
Sbjct: 1521 LAENEKLSETISKFVNFQESQGHRVTNYVHILLEEADVQPTPLDLDDELELPHANKCIS- 1579
Query: 250 FLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
E+ V + VDVPK LGDV EAL+
Sbjct: 1580 -QKAEQGVPPKGEFNISTNVDVPKTLGDVLEALI 1612
>gi|80979087|gb|ABB54746.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 155 bits (391), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID------ 82
SS NF + + + +KV+AD +E+L GV +++ G++ A L+ I ++ ID
Sbjct: 1342 SSEVNFCVGLVTIPNKVIADTLEALLGVIVKNYGLQHAFKMLEYFKIC-RADIDKPLTQL 1400
Query: 83 VHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNAN 142
++ L G A + G Y LEK + YTF+D+ +LLQAL+HP+Y N
Sbjct: 1401 LNLELGGKKMRANVNTTEIDGFLINHYY-----LEKNLGYTFKDRRYLLQALTHPSYPTN 1455
Query: 143 RITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLH 202
RIT SYQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH
Sbjct: 1456 RITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLH 1515
Query: 203 KHLLHDSPRLYENVTRFAQNQEARNHEIS-------------------DEEEEEEEEEGI 243
+L ++ +L E +++F QE++ H ++ D+E + E
Sbjct: 1516 FFILAENAKLSEIISKFVNFQESQGHRVTNYVRILLEEADVQPTPLDLDDELDMTELPHA 1575
Query: 244 VRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+C+ EK V + VDVPKALGDV EAL+
Sbjct: 1576 NKCIS--QEAEKGVPPKGEFNMSTNVDVPKALGDVLEALI 1613
>gi|334283448|gb|AAR82738.2| SD11113p [Drosophila melanogaster]
Length = 1701
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID------ 82
SS NF + + + +KV+AD +E+L GV +++ G++ A L+ I ++ ID
Sbjct: 1328 SSEVNFCVGLVTIPNKVIADTLEALLGVIVKNYGLQHAFKMLEYFKIC-RADIDKPLTQL 1386
Query: 83 VHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNAN 142
++ L G A + G Y LEK + YTF+D+ +LLQAL+HP+Y N
Sbjct: 1387 LNLELGGKKMRANVNTTEIDGFLINHYY-----LEKNLGYTFKDRRYLLQALTHPSYPTN 1441
Query: 143 RITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLH 202
RIT SYQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH
Sbjct: 1442 RITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLH 1501
Query: 203 KHLLHDSPRLYENVTRFAQNQEARNHEIS-------------------DEEEEEEEEEGI 243
+L ++ +L E +++F QE++ H ++ D+E + E
Sbjct: 1502 FFILAENAKLSEIISKFVNFQESQGHRVTNYVRILLEEADVQPTPLDLDDELDMTELPHA 1561
Query: 244 VRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+C+ EK V + VDVPKALGDV EAL+
Sbjct: 1562 NKCIS--QEAEKGVPPKGEFNMSTNVDVPKALGDVLEALI 1599
>gi|22026807|ref|NP_523778.2| Dicer-2 [Drosophila melanogaster]
gi|21627058|gb|AAF57830.2| Dicer-2 [Drosophila melanogaster]
gi|342672109|gb|AEL30809.1| FI15132p1 [Drosophila melanogaster]
Length = 1722
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID------ 82
SS NF + + + +KV+AD +E+L GV +++ G++ A L+ I ++ ID
Sbjct: 1349 SSEVNFCVGLVTIPNKVIADTLEALLGVIVKNYGLQHAFKMLEYFKIC-RADIDKPLTQL 1407
Query: 83 VHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNAN 142
++ L G A + G Y LEK + YTF+D+ +LLQAL+HP+Y N
Sbjct: 1408 LNLELGGKKMRANVNTTEIDGFLINHYY-----LEKNLGYTFKDRRYLLQALTHPSYPTN 1462
Query: 143 RITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLH 202
RIT SYQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH
Sbjct: 1463 RITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLH 1522
Query: 203 KHLLHDSPRLYENVTRFAQNQEARNHEIS-------------------DEEEEEEEEEGI 243
+L ++ +L E +++F QE++ H ++ D+E + E
Sbjct: 1523 FFILAENAKLSEIISKFVNFQESQGHRVTNYVRILLEEADVQPTPLDLDDELDMTELPHA 1582
Query: 244 VRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+C+ EK V + VDVPKALGDV EAL+
Sbjct: 1583 NKCIS--QEAEKGVPPKGEFNMSTNVDVPKALGDVLEALI 1620
>gi|80979095|gb|ABB54750.1| Dicer-2 [Drosophila melanogaster]
Length = 1715
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 100/280 (35%), Positives = 156/280 (55%), Gaps = 34/280 (12%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID------ 82
SS NF + + + +KV+AD +E+L GV +++ G++ A L+ I ++ ID
Sbjct: 1342 SSEVNFCVGLVTIPNKVIADTLEALLGVIVKNYGLQHAFKMLEYFKIC-RADIDKPLTQL 1400
Query: 83 VHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNAN 142
++ L G A + G ++ LEK + YTF+D+ +LLQAL+HP+Y N
Sbjct: 1401 LNLELGGKKMRANVNTTEIDG-----FLINHFYLEKNLGYTFKDRRYLLQALTHPSYPTN 1455
Query: 143 RITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLH 202
RIT SYQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH
Sbjct: 1456 RITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLH 1515
Query: 203 KHLLHDSPRLYENVTRFAQNQEARNHEIS-------------------DEEEEEEEEEGI 243
+L ++ +L E +++F QE++ H ++ D+E + E
Sbjct: 1516 FFILAENAKLSEIISKFVNFQESQGHRVTNYVRILLEEADVQPTPLDLDDELDMTELPHA 1575
Query: 244 VRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+C+ EK V + VDVPKALGDV EAL+
Sbjct: 1576 NKCIS--QEAEKGVPPKGEFNMSTNVDVPKALGDVLEALI 1613
>gi|47210543|emb|CAF93935.1| unnamed protein product [Tetraodon nigroviridis]
Length = 479
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 99/269 (36%), Positives = 145/269 (53%), Gaps = 39/269 (14%)
Query: 32 SYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALN--ILP-----------Q 78
SY+ + DK +AD VE+L G YL SCG A +FL +L +LP
Sbjct: 127 SYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQMFLCSLGLKVLPLEQGAAAGAAQS 186
Query: 79 SKIDVHEALYGPHPSAVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQAL 134
+ + YG RC P+ L+ L I E++I+YTFQ+K++LLQA
Sbjct: 187 GRTAASDLCYGWLKIPPRCMLDHPDAEHTLNHL--ISGFENFERKISYTFQNKAYLLQAF 244
Query: 135 SHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFAS 194
+H +Y+ N IT YQRLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS
Sbjct: 245 THASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFAS 304
Query: 195 YAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEE 254
AV+ D HK+ SP L+ + F Q Q +N E +G ++
Sbjct: 305 LAVKYDYHKYFKAISPELFHVIDDFVQFQLEKN-----------EMQG---------MDS 344
Query: 255 KDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+ +++ E ++VPKA+GD+FE+L
Sbjct: 345 ELRRSEEDEEKEEDIEVPKAMGDIFESLA 373
>gi|80979125|gb|ABB54765.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 154 bits (390), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 153/291 (52%), Gaps = 56/291 (19%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALY 88
S+ NF + + + DKV+AD +E+L GV +++ G++ A L+ I + D+ + L
Sbjct: 1346 SAEVNFCVGLVTIPDKVIADTLEALLGVIVKNYGLQHAFRMLEYFKI---CRADIGKPLT 1402
Query: 89 GP-----HPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANR 143
S +R +D ++ LE + YTF+D+ +LLQAL+HP++ NR
Sbjct: 1403 QLLDLELGGSKMRANVNTTEIDG--FLINHHHLENNLGYTFKDRGYLLQALTHPSFPTNR 1460
Query: 144 ITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHK 203
IT YQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH
Sbjct: 1461 ITGCYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHF 1520
Query: 204 HLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYG 263
+L ++ +L E++ +F Q QE++ H +++ + L+EE DVQ+
Sbjct: 1521 FILAENAKLAESIAKFVQFQESQRHRVTNH--------------VRILLEEADVQSTTLD 1566
Query: 264 -------------------------------RVVEYVDVPKALGDVFEALV 283
+ VDVPKALGDV EAL+
Sbjct: 1567 LDDDLDMTDLKNALKSISHEEEKNDPPKGDFNMSTNVDVPKALGDVLEALI 1617
>gi|80979127|gb|ABB54766.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 153/291 (52%), Gaps = 56/291 (19%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALY 88
S+ NF + + + DKV+AD +E+L GV +++ G++ A L+ I + D+ + L
Sbjct: 1346 SAEVNFCVGLVTIPDKVIADTLEALLGVIVKNYGLQHAFRMLEYFKI---CRADIGKPLT 1402
Query: 89 GP-----HPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANR 143
S +R +D ++ LE + YTF+D+ +LLQAL+HP++ NR
Sbjct: 1403 QLLDLELGGSKMRANVNTTEIDG--FLINHHHLENNLGYTFKDRGYLLQALTHPSFPTNR 1460
Query: 144 ITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHK 203
IT YQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH
Sbjct: 1461 ITGCYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHF 1520
Query: 204 HLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYG 263
+L ++ +L E++ +F Q QE++ H +++ + L+EE DVQ+
Sbjct: 1521 FILAENAKLAESIAKFVQFQESQRHRVTNH--------------VRILLEEADVQSTTLD 1566
Query: 264 -------------------------------RVVEYVDVPKALGDVFEALV 283
+ VDVPKALGDV EAL+
Sbjct: 1567 LDDDLDMTDLKNALKSISHEEEKNEPPKGDFNMSTNVDVPKALGDVLEALI 1617
>gi|80979123|gb|ABB54764.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 153/291 (52%), Gaps = 56/291 (19%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALY 88
S+ NF + + + DKV+AD +E+L GV +++ G++ A L+ I + D+ + L
Sbjct: 1346 SAEVNFCVGLVTIPDKVIADTLEALLGVIVKNYGLQHAFRMLEYFKI---CRADIGKPLT 1402
Query: 89 GP-----HPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANR 143
S +R +D ++ LE + YTF+D+ +LLQAL+HP++ NR
Sbjct: 1403 QLLDLELGGSKMRANVNTTEIDG--FLINHHHLENNLGYTFKDRGYLLQALTHPSFPTNR 1460
Query: 144 ITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHK 203
IT YQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH
Sbjct: 1461 ITGCYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHF 1520
Query: 204 HLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYG 263
+L ++ +L E++ +F Q QE++ H +++ + L+EE DVQ+
Sbjct: 1521 FILAENAKLAESIAKFVQFQESQRHRVTNH--------------VRILLEEADVQSTTLD 1566
Query: 264 -------------------------------RVVEYVDVPKALGDVFEALV 283
+ VDVPKALGDV EAL+
Sbjct: 1567 LDDDLDMTDLKNALKSISHEEEKNDPPKGBFNMSTNVDVPKALGDVLEALI 1617
>gi|80979121|gb|ABB54763.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 154 bits (390), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 153/291 (52%), Gaps = 56/291 (19%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALY 88
S+ NF + + + DKV+AD +E+L GV +++ G++ A L+ I + D+ + L
Sbjct: 1346 SAEVNFCVGLVTIPDKVIADTLEALLGVIVKNYGLQHAFRMLEYFKI---CRADIGKPLT 1402
Query: 89 GP-----HPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANR 143
S +R +D ++ LE + YTF+D+ +LLQAL+HP++ NR
Sbjct: 1403 QLLDLELGGSKMRANVNTTEIDG--FLINHHHLENNLGYTFKDRGYLLQALTHPSFPTNR 1460
Query: 144 ITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHK 203
IT YQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH
Sbjct: 1461 ITGCYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHF 1520
Query: 204 HLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYG 263
+L ++ +L E++ +F Q QE++ H +++ + L+EE DVQ+
Sbjct: 1521 FILAENAKLAESIAKFVQFQESQRHRVTNH--------------VRILLEEADVQSTTLD 1566
Query: 264 -------------------------------RVVEYVDVPKALGDVFEALV 283
+ VDVPKALGDV EAL+
Sbjct: 1567 LDDDLDMTDLKNALKSISHEEEKNDPPKGDFNMSTNVDVPKALGDVLEALI 1617
>gi|344248388|gb|EGW04492.1| Endoribonuclease Dicer [Cricetulus griseus]
Length = 1907
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 158/311 (50%), Gaps = 61/311 (19%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1513 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1570
Query: 72 ALN--ILPQSKIDVHE-ALY--------------GPHPSAVRCPEQARGLD----PLRYI 110
+L +LP K E ALY G + P + G D L+
Sbjct: 1571 SLGLKVLPVIKRTSREKALYPAQENFSSQQKSLSGSCAATAASPRSSAGKDLEYGCLKIP 1630
Query: 111 PECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLE 152
P C EK+INY F++K++LLQA +H +Y+ N IT YQRLE
Sbjct: 1631 PRCMFDHPDAEKTLNHLISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLE 1690
Query: 153 FLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
FLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP L
Sbjct: 1691 FLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPEL 1750
Query: 213 YENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVP 272
+ + F Q Q +N E +G ++ + +++ E ++VP
Sbjct: 1751 FHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDIEVP 1790
Query: 273 KALGDVFEALV 283
KA+GD+FE+L
Sbjct: 1791 KAMGDIFESLA 1801
>gi|346716367|ref|NP_001231198.1| endoribonuclease Dicer [Cricetulus griseus]
gi|257051055|sp|A0MQH0.3|DICER_CRIGR RecName: Full=Endoribonuclease Dicer
gi|116831677|gb|ABK28790.1| DICER [Cricetulus griseus]
Length = 1917
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 158/311 (50%), Gaps = 61/311 (19%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1523 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1580
Query: 72 ALN--ILPQSKIDVHE-ALY--------------GPHPSAVRCPEQARGLD----PLRYI 110
+L +LP K E ALY G + P + G D L+
Sbjct: 1581 SLGLKVLPVIKRTSREKALYPAQENFSSQQKSLSGSCAATAASPRSSAGKDLEYGCLKIP 1640
Query: 111 PECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLE 152
P C EK+INY F++K++LLQA +H +Y+ N IT YQRLE
Sbjct: 1641 PRCMFDHPDAEKTLNHLISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLE 1700
Query: 153 FLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
FLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP L
Sbjct: 1701 FLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPEL 1760
Query: 213 YENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVP 272
+ + F Q Q +N E +G ++ + +++ E ++VP
Sbjct: 1761 FHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDIEVP 1800
Query: 273 KALGDVFEALV 283
KA+GD+FE+L
Sbjct: 1801 KAMGDIFESLA 1811
>gi|195487840|ref|XP_002092062.1| Dcr-2 [Drosophila yakuba]
gi|194178163|gb|EDW91774.1| Dcr-2 [Drosophila yakuba]
Length = 1730
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 153/291 (52%), Gaps = 56/291 (19%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALY 88
S+ NF + + + DKV+AD +E+L GV +++ G++ A L+ I + D+ + L
Sbjct: 1357 SAEVNFCVGLVTIPDKVIADTLEALLGVIVKNYGLQHAFRMLEYFKI---CRADIGKPLT 1413
Query: 89 GP-----HPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANR 143
S +R +D ++ LE + YTF+D+ +LLQAL+HP++ NR
Sbjct: 1414 QLLDLELGGSKMRANVNTTEIDG--FLINHHHLENNLGYTFKDRGYLLQALTHPSFPTNR 1471
Query: 144 ITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHK 203
IT YQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH
Sbjct: 1472 ITGCYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHF 1531
Query: 204 HLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYG 263
+L ++ +L E++ +F Q QE++ H +++ + L+EE DVQ+
Sbjct: 1532 FILAENAKLAESIAKFVQFQESQRHRVTNH--------------VRILLEEADVQSTTLD 1577
Query: 264 -------------------------------RVVEYVDVPKALGDVFEALV 283
+ VDVPKALGDV EAL+
Sbjct: 1578 LDDDLDMTDLKNALKSISHEEEKNDPPKGDFNMSTNVDVPKALGDVLEALI 1628
>gi|80979117|gb|ABB54761.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 153/291 (52%), Gaps = 56/291 (19%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALY 88
S+ NF + + + DKV+AD +E+L GV +++ G++ A L+ I + D+ + L
Sbjct: 1346 SAEVNFCVGLVTIPDKVIADTLEALLGVIVKNYGLQHAFRMLEYFKI---CRADIGKPLT 1402
Query: 89 GP-----HPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANR 143
S +R +D ++ LE + YTF+D+ +LLQAL+HP++ NR
Sbjct: 1403 QLLDLELGGSKMRANVNTTEIDG--FLINHHHLENNLGYTFKDRGYLLQALTHPSFPTNR 1460
Query: 144 ITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHK 203
IT YQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH
Sbjct: 1461 ITGCYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHF 1520
Query: 204 HLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYG 263
+L ++ +L E++ +F Q QE++ H +++ + L+EE DVQ+
Sbjct: 1521 FILAENAKLAESIAKFVQFQESQRHRVTNH--------------VRILLEEADVQSTTLD 1566
Query: 264 -------------------------------RVVEYVDVPKALGDVFEALV 283
+ VDVPKALGDV EAL+
Sbjct: 1567 LDDDLDMTDLKNALKSISHEEEKNDPPKGDFNMSTNVDVPKALGDVLEALI 1617
>gi|80979129|gb|ABB54767.1| Dicer-2 [Drosophila yakuba]
Length = 1719
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 153/291 (52%), Gaps = 56/291 (19%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALY 88
S+ NF + + + DKV+AD +E+L GV +++ G++ A L+ I + D+ + L
Sbjct: 1346 SAEVNFCVGLVTIPDKVIADTLEALLGVIVKNYGLQHAFRMLEYFKI---CRADIGKPLT 1402
Query: 89 GP-----HPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANR 143
S +R +D ++ LE + YTF+D+ +LLQAL+HP++ NR
Sbjct: 1403 QLLDLELGGSKMRANVNTTEIDG--FLINHHHLENNLGYTFKDRGYLLQALTHPSFPTNR 1460
Query: 144 ITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHK 203
IT YQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH
Sbjct: 1461 ITGCYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHF 1520
Query: 204 HLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYG 263
+L ++ +L E++ +F Q QE++ H +++ + L+EE DVQ+
Sbjct: 1521 FILAENAKLAESIAKFVQFQESQRHRVTNH--------------VRILLEEADVQSTTLD 1566
Query: 264 -------------------------------RVVEYVDVPKALGDVFEALV 283
+ VDVPKALGDV EAL+
Sbjct: 1567 LDDDLDMTDLKNALKSISHEEEKNDPPKGDFNMSTNVDVPKALGDVLEALI 1617
>gi|16215719|dbj|BAB69959.1| double-strand-specific ribonuclease [Drosophila melanogaster]
Length = 1722
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 155/280 (55%), Gaps = 34/280 (12%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID------ 82
SS NF + + + +KV+AD +E+L GV +++ G++ A L+ I ++ ID
Sbjct: 1349 SSEVNFCVGLVTILNKVIADTLEALLGVIVKNYGLQHAFKMLEYFKIC-RADIDKPLTQL 1407
Query: 83 VHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNAN 142
++ L G A + G Y LEK + YTF+D+ +LLQAL+HP+Y N
Sbjct: 1408 LNLELGGKKMRANVNTTEIDGFLINHYY-----LEKNLGYTFKDRRYLLQALTHPSYPTN 1462
Query: 143 RITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLH 202
RIT SYQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH
Sbjct: 1463 RITGSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLH 1522
Query: 203 KHLLHDSPRLYENVTRFAQNQEARNHEIS-------------------DEEEEEEEEEGI 243
+L ++ +L E +++F QE++ H ++ D+E + E
Sbjct: 1523 FFILAENAKLSEIISKFVNFQESQGHRVTNYVRILLEEADVQPTPPDLDDELDMTELPHA 1582
Query: 244 VRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+C+ EK V + VDVPKALGDV EAL+
Sbjct: 1583 NKCIS--QEAEKGVPPKGEFSMSTNVDVPKALGDVLEALI 1620
>gi|80979101|gb|ABB54753.1| Dicer-2 [Drosophila simulans]
Length = 1714
Score = 154 bits (389), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 99/286 (34%), Positives = 154/286 (53%), Gaps = 49/286 (17%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID--VHEA 86
SS NF + + + +KV+AD +E+L GV +++ G++ A L+ I +S ID + E
Sbjct: 1344 SSEVNFCVGLVAIANKVIADTLEALLGVIVKNYGLQHAFKMLEYFKIC-RSDIDKPLTEL 1402
Query: 87 LYGPHPSA-VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRIT 145
L S +R +D ++ + LE + YTF+D+ +LLQAL+HP+Y NRIT
Sbjct: 1403 LNLELGSKNIRANVNTTEIDG--FLINHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRIT 1460
Query: 146 TSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
SYQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH +
Sbjct: 1461 GSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFI 1520
Query: 206 LHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYG-- 263
L ++ +L E +++F QE++ H +++ + L+EE DVQ
Sbjct: 1521 LAENEKLSETISKFVNFQESQGHRVTN--------------YVHILLEEADVQPTPLDLD 1566
Query: 264 --------------------------RVVEYVDVPKALGDVFEALV 283
+ VDVPK LGDV EAL+
Sbjct: 1567 DELELPHANKCISQEAEQGVPPKGEFNMSTNVDVPKTLGDVLEALI 1612
>gi|80979105|gb|ABB54755.1| Dicer-2 [Drosophila simulans]
gi|80979109|gb|ABB54757.1| Dicer-2 [Drosophila simulans]
Length = 1714
Score = 154 bits (389), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 99/286 (34%), Positives = 154/286 (53%), Gaps = 49/286 (17%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID--VHEA 86
SS NF + + + +KV+AD +E+L GV +++ G++ A L+ I +S ID + E
Sbjct: 1344 SSEVNFCVGLVAIANKVIADTLEALLGVIVKNYGLQHAFKMLEYFKIC-RSDIDKPLTEL 1402
Query: 87 LYGPHPSA-VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRIT 145
L S +R +D ++ + LE + YTF+D+ +LLQAL+HP+Y NRIT
Sbjct: 1403 LNLELGSKNIRANVNTTEIDG--FLINHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRIT 1460
Query: 146 TSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
SYQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH +
Sbjct: 1461 GSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFI 1520
Query: 206 LHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYG-- 263
L ++ +L E +++F QE++ H +++ + L+EE DVQ
Sbjct: 1521 LAENEKLSETISKFVNFQESQGHRVTN--------------YVHILLEEADVQPTPLDLD 1566
Query: 264 --------------------------RVVEYVDVPKALGDVFEALV 283
+ VDVPK LGDV EAL+
Sbjct: 1567 DELELPHANKCISQEAEQGVPPKGEFNMSTNVDVPKTLGDVLEALI 1612
>gi|194880776|ref|XP_001974538.1| GG21041 [Drosophila erecta]
gi|190657725|gb|EDV54938.1| GG21041 [Drosophila erecta]
Length = 1729
Score = 154 bits (388), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 98/290 (33%), Positives = 155/290 (53%), Gaps = 55/290 (18%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALY 88
S+ NF + + + DKV+AD +E+L GV +++ G++ A L+ I + D+ + L
Sbjct: 1357 SAEVNFCVGLVSIPDKVIADTLEALLGVIVKNYGLQHAFRMLEYFKI---CRADIGKPLT 1413
Query: 89 GP-----HPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANR 143
S +R + +D ++ LE + YTF+D+ +LLQAL+HP+Y NR
Sbjct: 1414 QLLDLELGGSKMRANVNSTEIDG--FLINHYHLENNLGYTFKDRGYLLQALTHPSYPTNR 1471
Query: 144 ITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHK 203
IT YQ LEF+GDAI+DFL++ Y++EN ++++PG ++D+RSA+VNN T A VR LH
Sbjct: 1472 ITGCYQELEFIGDAILDFLISVYIFENNTNMNPGALTDLRSALVNNTTLACICVRHRLHF 1531
Query: 204 HLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQ----- 258
+L ++ L E++++F QE++ H +++ + L+EE DVQ
Sbjct: 1532 FILAENAMLAESISKFVHFQESQRHRVTNH--------------VRILLEEADVQPTSLD 1577
Query: 259 TDVYGRVVEY-------------------------VDVPKALGDVFEALV 283
D Y + E VDVPKALGDV EAL+
Sbjct: 1578 LDDYLDMTELNNALKSISQEEQNDQPRGEFNMSTNVDVPKALGDVLEALI 1627
>gi|357619534|gb|EHJ72068.1| putative dicer 1 [Danaus plexippus]
Length = 754
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 105/305 (34%), Positives = 151/305 (49%), Gaps = 75/305 (24%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LPQSKIDVHE----- 85
YN + + + DK +AD VE+L G YL CG GA+LF+ L I LP + + E
Sbjct: 368 YNLITQHSIPDKSIADCVEALIGAYLLECGPRGALLFMSWLGITVLPTHTVPLPENHPFV 427
Query: 86 ----------------------ALYGPHPSAVRCPEQARGL-------------DPL-RY 109
G P +++ + + G PL RY
Sbjct: 428 VKMRNRQDDKETDISDEEDDKWCWDGRPPGSLKPHKDSEGRWVQTIYGALKSPPSPLLRY 487
Query: 110 I--PEC---------TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAI 158
I PE LE + Y F+D+S LL AL+H + + N +T YQRLEFLGDAI
Sbjct: 488 IEDPEGELERMLSGYDALENTLQYRFRDRSLLLTALTHASCHNNTLTDCYQRLEFLGDAI 547
Query: 159 IDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTR 218
+D+L+T +LYE+ SPG ++D+RSA+VNN FA+ A R HK+ H SP L E +T+
Sbjct: 548 LDYLITRHLYEDPRRHSPGALTDLRSALVNNTIFATLAARHGFHKYFRHMSPGLNEVLTK 607
Query: 219 FAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDV 278
+ + QE H IS+E +LI+E +++ E V+VPKALGD+
Sbjct: 608 YVKIQEENGHSISEEH---------------YLIQEDEMEQ------AEDVEVPKALGDL 646
Query: 279 FEALV 283
FE++
Sbjct: 647 FESVA 651
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRS 184
S +LQAL+ NAN + +RLE +GD+ + F +TAYLY + G++S +RS
Sbjct: 292 SVILQALT--MSNAND-GINLERLETIGDSFLKFAITAYLYCALPAVHEGKLSHMRS 345
>gi|308237838|ref|NP_001184123.1| endoribonuclease Dicer [Sus scrofa]
gi|307715909|gb|ADN88174.1| dicer [Sus scrofa]
Length = 1915
Score = 154 bits (388), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 159/312 (50%), Gaps = 65/312 (20%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1523 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1580
Query: 72 ALN--ILPQSK---------------IDVHEALYGPHPSAVRCPEQARGLDPLRY----- 109
+L +LP K + L G P+A ++ GL L Y
Sbjct: 1581 SLGLKVLPAVKRTDRAQAACPARESFTSQQKTLSGGRPAAG---SRSSGLKDLEYGCLKI 1637
Query: 110 IPECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRL 151
P C E++INY+F++K++LLQA +H +Y+ N IT YQRL
Sbjct: 1638 PPRCMFDHPDADRTLSHLISGFENFERKINYSFKNKAYLLQAFTHASYHYNTITDCYQRL 1697
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPR 211
EFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP
Sbjct: 1698 EFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPE 1757
Query: 212 LYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDV 271
L+ + F Q Q +N E +G ++ + +++ E ++V
Sbjct: 1758 LFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDIEV 1797
Query: 272 PKALGDVFEALV 283
PKA+GD+FE+L
Sbjct: 1798 PKAMGDIFESLA 1809
>gi|80979131|gb|ABB54768.1| Dicer-2 [Drosophila santomea]
Length = 1719
Score = 153 bits (387), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 96/291 (32%), Positives = 152/291 (52%), Gaps = 56/291 (19%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALY 88
S+ NF + + + DKV+AD +E+L GV +++ G++ A L+ I + D+ + L
Sbjct: 1346 STEVNFCVGLVTIPDKVIADTLEALLGVIVKNYGLQHAFRMLEYFKI---CRADIGKPLT 1402
Query: 89 GP-----HPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANR 143
S +R +D ++ LE + YTF+D+ +LLQAL+HP++ NR
Sbjct: 1403 QLLDLELGGSKMRANVNTTEIDG--FLINHHHLENNLGYTFKDRGYLLQALTHPSFPTNR 1460
Query: 144 ITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHK 203
IT YQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH
Sbjct: 1461 ITGCYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHF 1520
Query: 204 HLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYG 263
+L ++ +L E++ +F Q QE++ H +++ + L+EE DVQ
Sbjct: 1521 FILAENAKLAESIAKFVQFQESQRHRVTNH--------------VRILLEEADVQPTTLD 1566
Query: 264 -------------------------------RVVEYVDVPKALGDVFEALV 283
+ VDVPKALGDV EAL+
Sbjct: 1567 LDDDLDMTDLKNALKSISHEEEQNYPPKGDFNMSTNVDVPKALGDVLEALI 1617
>gi|351701180|gb|EHB04099.1| Endoribonuclease Dicer [Heterocephalus glaber]
Length = 1935
Score = 153 bits (387), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 107/312 (34%), Positives = 157/312 (50%), Gaps = 62/312 (19%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1540 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1597
Query: 72 ALN--ILPQSKIDVHE---------------ALYGPHPSAVRCPEQARGLDPLRY----- 109
+L +LP K E +L G SAV ++ L Y
Sbjct: 1598 SLGLKVLPVIKRTGREKALCPALENFSSQQKSLSGSCASAVAAGSRSSAWKDLEYGCLKI 1657
Query: 110 IPECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRL 151
P C EK+INY F++K++LLQA +H +Y+ N IT YQRL
Sbjct: 1658 PPRCMFDHPDADKTLTHLISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRL 1717
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPR 211
EFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP
Sbjct: 1718 EFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPE 1777
Query: 212 LYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDV 271
L+ + F Q Q +N E +G ++ + +++ E ++V
Sbjct: 1778 LFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDIEV 1817
Query: 272 PKALGDVFEALV 283
PKA+GD+FE+L
Sbjct: 1818 PKAMGDIFESLA 1829
>gi|94957752|ref|NP_001035555.1| endoribonuclease Dicer [Gallus gallus]
gi|257051054|sp|Q25BN1.3|DICER_CHICK RecName: Full=Endoribonuclease Dicer
gi|90074858|dbj|BAE87103.1| Dicer protein [Gallus gallus]
Length = 1921
Score = 153 bits (386), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 157/315 (49%), Gaps = 68/315 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1526 FWNPSEENCGVDAGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1583
Query: 72 ALN--ILPQ-SKIDVHEALYGPHPSAVRCPEQARGLDP---------------------- 106
+L +LP K D L + C + + L P
Sbjct: 1584 SLGLKVLPVIKKTDWESTLCA---TGENCNSEQKNLSPNSVSACIVNSEPSLYKDLEYGC 1640
Query: 107 LRYIPECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSY 148
L+ P C EK+INY+F++K++LLQA +H +Y+ N IT Y
Sbjct: 1641 LKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYSFKNKAYLLQAFTHASYHYNTITDCY 1700
Query: 149 QRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
QRLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+
Sbjct: 1701 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAV 1760
Query: 209 SPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEY 268
SP L+ + F Q Q +N E +G ++ + +++ E
Sbjct: 1761 SPELFHVIDDFVQFQMEKN-----------EMQG---------MDSELRRSEEDEEKEED 1800
Query: 269 VDVPKALGDVFEALV 283
++VPKA+GD+FE+L
Sbjct: 1801 IEVPKAMGDIFESLA 1815
>gi|195584278|ref|XP_002081941.1| Dcr-2 [Drosophila simulans]
gi|194193950|gb|EDX07526.1| Dcr-2 [Drosophila simulans]
Length = 1666
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/276 (34%), Positives = 149/276 (53%), Gaps = 48/276 (17%)
Query: 39 IKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID--VHEALYGPHPSA-V 95
+ + +KV+AD +E+L GV +++ G++ A L+ I +S ID + E L S +
Sbjct: 1306 VAIANKVIADTLEALLGVIVKNYGLQHAFKMLEYFKIC-RSDIDKPLTELLNLELGSKNI 1364
Query: 96 RCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLG 155
R +D ++ + LE + YTF+D+ +LLQAL+HP+Y NRIT SYQ LEF+G
Sbjct: 1365 RANVNTTEIDG--FLINHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRITGSYQELEFIG 1422
Query: 156 DAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYEN 215
DAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH +L ++ +L E
Sbjct: 1423 DAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFILAENEKLSET 1482
Query: 216 VTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYG------------ 263
+++F QE++ H +++ + L+EE DVQ
Sbjct: 1483 ISKFVNFQESQGHRVTN--------------YVHILLEEADVQPTPLDLDDELELPHANK 1528
Query: 264 ----------------RVVEYVDVPKALGDVFEALV 283
+ VDVPK LGDV EAL+
Sbjct: 1529 CISQEAEQGVPPKGEFNMSTNVDVPKTLGDVLEALI 1564
>gi|195335297|ref|XP_002034311.1| GM19969 [Drosophila sechellia]
gi|194126281|gb|EDW48324.1| GM19969 [Drosophila sechellia]
Length = 1731
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 99/278 (35%), Positives = 155/278 (55%), Gaps = 33/278 (11%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID--VHEA 86
SS N+ + ++ + +KV+AD +E+L GV +++ G++ A L+ I +S ID + E
Sbjct: 1361 SSEVNYCVGQVTIANKVIADTLEALLGVIVKNYGLQHAFKMLEYFKIC-RSDIDKPLTEL 1419
Query: 87 LYGPHPSA-VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRIT 145
L S +R +D ++ + LE + YTF+D+ +LLQAL+HP+Y NRIT
Sbjct: 1420 LNLELGSKNIRANVNTTEIDG--FLINHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRIT 1477
Query: 146 TSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
SYQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH +
Sbjct: 1478 GSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFI 1537
Query: 206 LHDSPRLYENVTRFAQNQEARNHEIS--------------------DEEEEEEEEEGIVR 245
L ++ +L E +++F QE++ H ++ DE E E I +
Sbjct: 1538 LAENEKLSETISKFVNFQESQGHRVTNYVHILLEEADVLPTPLDLDDELELPHANECISQ 1597
Query: 246 CLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
E+ V + VDVPK LGDV EAL+
Sbjct: 1598 ------EAEQGVPPKGEFNMSTNVDVPKTLGDVLEALI 1629
>gi|378405592|gb|AFB82635.1| dicer-2 [Marsupenaeus japonicus]
Length = 1502
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/274 (35%), Positives = 147/274 (53%), Gaps = 39/274 (14%)
Query: 16 TEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI 75
++D K EK S YN ++ DK +AD VE++ G YLR CG E A FL L +
Sbjct: 1144 SDDASKDEKAEK-KGSCYNPWTEHEVSDKSIADCVEAIIGAYLRVCGNEAAAAFLHWLGV 1202
Query: 76 LPQSKIDVHEALYGPHPSAVRCP----EQARGLDPLRYIPECTQLEKRINYTFQDKSFLL 131
+ +L P VR E A+ L +LEK+I YTF+D+SF++
Sbjct: 1203 ----GVFRDNSLLM-EPKTVRTARVRKECAQDLTIFYKKAVLDRLEKKIGYTFRDRSFIV 1257
Query: 132 QALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVT 191
QA++H +Y N++T YQRLEFLGDA++D+LVT +++ F+ SPG++SD+RS V N T
Sbjct: 1258 QAVTHSSYVNNQVTDCYQRLEFLGDAVLDYLVTCHIFCRFTDYSPGQLSDLRSYFVKNDT 1317
Query: 192 FASYAVRLDLHKHLLHDSPRLYENVTRFAQ--NQEARNHEISDEEEEEEEEEGIVRCLIF 249
A + LH+HLLH +P+L ++ +F +Q+ E++ E+
Sbjct: 1318 LGRAAAKGKLHQHLLHINPKLEASIDKFLSILHQDPLGEELNTED--------------- 1362
Query: 250 FLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
DVQ E V++PKALGD+ EA++
Sbjct: 1363 ------DVQD------CEDVEIPKALGDMVEAII 1384
>gi|410928196|ref|XP_003977487.1| PREDICTED: endoribonuclease Dicer-like [Takifugu rubripes]
Length = 1883
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 100/269 (37%), Positives = 147/269 (54%), Gaps = 39/269 (14%)
Query: 32 SYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALN--ILP------------ 77
SY+ + DK +AD VE+L G YL SCG A +FL +L +LP
Sbjct: 1531 SYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQMFLCSLGLKVLPLEEGVVTGPRRS 1590
Query: 78 --QSKIDV-HEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQAL 134
+ +D+ + L P S + P+ L L I E++INYTFQ+K++LLQA
Sbjct: 1591 HGTTAVDLCYGWLKIPPRSMLDHPDAEHTLHHL--ISGFENFERKINYTFQNKAYLLQAF 1648
Query: 135 SHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFAS 194
+H +Y+ N IT YQRLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS
Sbjct: 1649 THASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFAS 1708
Query: 195 YAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEE 254
AV+ D HK+ SP L+ + F Q Q +N E +G ++
Sbjct: 1709 LAVKYDYHKYFKAISPELFHVIDDFVQFQLEKN-----------EMQG---------MDS 1748
Query: 255 KDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+ +++ E ++VPKA+GD+FE+L
Sbjct: 1749 ELRRSEEDEEKEEDIEVPKAMGDIFESLA 1777
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 42/96 (43%), Gaps = 2/96 (2%)
Query: 149 QRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
+RLE LGD+ + +T YL+ + G +S +RS V+N + L ++
Sbjct: 1279 ERLEMLGDSFLKHAITTYLFCTYPDAHEGRLSYMRSKKVSNCNLYRLGKKKGLPSRMVVS 1338
Query: 209 --SPRLYENVTRFAQNQEARNHEISDEEEEEEEEEG 242
P + + NQE N++ D EEE G
Sbjct: 1339 IFDPPVNWLPPGYIVNQEKSNNDKLDCAEEENLSNG 1374
>gi|80979133|gb|ABB54769.1| Dicer-2 [Drosophila teissieri]
Length = 1719
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/291 (32%), Positives = 151/291 (51%), Gaps = 56/291 (19%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALY 88
S+ NF + + + DKV+AD +E+L GV +++ G++ A L+ I + D+ + L
Sbjct: 1346 SAEVNFCVGLVTIADKVIADTLEALLGVIVKNYGLQHAFRMLEYFKI---CRADIGKPLT 1402
Query: 89 GP-----HPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANR 143
S +R +D ++ LE + YTF+D+ +LLQAL+HP++ NR
Sbjct: 1403 QLLDLELGGSKMRANVNTTEIDG--FLINHHHLENNLGYTFKDRGYLLQALTHPSFPTNR 1460
Query: 144 ITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHK 203
IT YQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH
Sbjct: 1461 ITGCYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHF 1520
Query: 204 HLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYG 263
+L ++ +L E++ +F Q QE++ H +++ + L+EE DVQ
Sbjct: 1521 FILAENAKLAESIAKFVQFQESQRHRVTNH--------------VRILLEEADVQPTTLD 1566
Query: 264 -------------------------------RVVEYVDVPKALGDVFEALV 283
+ VDVPKALGDV E L+
Sbjct: 1567 LDDDLDMTDLKNALKSISHEEEQNDPAKGDFNMSTNVDVPKALGDVLEXLI 1617
>gi|432096208|gb|ELK27069.1| Endoribonuclease Dicer [Myotis davidii]
Length = 1970
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 98/268 (36%), Positives = 138/268 (51%), Gaps = 38/268 (14%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1515 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1572
Query: 72 ALN--ILPQSKIDVHEALYGPHPSAVRCPEQARGLDP--------------LRYIPECT- 114
+L +LP K HE P + C Q R L L+ P C
Sbjct: 1573 SLGLKVLPVIKRTEHEKAMCP--ARENCSSQQRSLSGSRAAAAGKDVEYGCLKIPPRCMF 1630
Query: 115 -----------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
E++INY F++K++LLQA +H +Y+ N IT YQRLEFLGDA
Sbjct: 1631 DHPDADKTLTHLISGFENFEEKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDA 1690
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
I+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP L++ +
Sbjct: 1691 ILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFQVID 1750
Query: 218 RFAQNQEARNHEISDEEEEEEEEEGIVR 245
F Q Q +N + E E VR
Sbjct: 1751 VFVQFQLEKNEMQGMDSEVSAAERVRVR 1778
>gi|283131646|dbj|BAI63215.1| Dicer [Hemicentrotus pulcherrimus]
Length = 1816
Score = 152 bits (384), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/298 (34%), Positives = 157/298 (52%), Gaps = 57/298 (19%)
Query: 16 TEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFL--QAL 73
T G K +P Y + + DK +AD VE+L G YL SCG A+L + L
Sbjct: 1444 TYTGAKTQDLGSVPQLPYEIHTQHSMSDKSIADCVEALIGCYLVSCGFRSALLIMAWMGL 1503
Query: 74 NILP----QSK------IDVHEA------LYGPHPSAVRCPEQARGLDPLRYIPECTQL- 116
++LP QSK D+ A LYG ++ PE LR +P +
Sbjct: 1504 DVLPAINDQSKKRNDQSSDLPAADLPVSCLYG----YLKQPESPL----LRSVPNAEDVL 1555
Query: 117 ----------EKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAY 166
EK INY F+D+++LLQA +H +Y+ N IT YQRLEFLGDA++D+L+T +
Sbjct: 1556 QQQLVGYDGFEKTINYRFKDRAYLLQAFTHSSYHRNSITDCYQRLEFLGDALLDYLITRH 1615
Query: 167 LYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEAR 226
LY++ ++LSPG ++D+RSA+VNN FAS AV+ + HK+ + +++ + F +A+
Sbjct: 1616 LYDHHTNLSPGALTDLRSALVNNTIFASLAVKFNFHKYFKAYTANMFQVIDNFVTFVDAK 1675
Query: 227 NHEIS-DEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
N + D + + E +G E++ D ++VPKALGD+FE++
Sbjct: 1676 NEALGMDSQLKYSEMDG-----------EQEESED--------IEVPKALGDIFESVA 1714
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 149 QRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
+RLE LGD+ + VTAYLY + HL G++S +RS V+N
Sbjct: 1275 ERLEMLGDSFLKQAVTAYLYCTYPHLDEGKLSFLRSKQVSN 1315
>gi|254281274|ref|NP_001156875.1| endoribonuclease Dicer [Taeniopygia guttata]
Length = 1921
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 157/315 (49%), Gaps = 68/315 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1526 FWNPSEENCGVDAGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1583
Query: 72 ALN--ILPQ-SKIDVHEALYGPHPSAVRCPEQARGLDP---------------------- 106
+L +LP K D L + C + + L P
Sbjct: 1584 SLGLKVLPVIKKTDWEGTLCA---TRENCNSEQKNLSPNSVAASVVNSEPSLCKDLEYGC 1640
Query: 107 LRYIPECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSY 148
L+ P C EK+INY+F++K++LLQA +H +Y+ N IT Y
Sbjct: 1641 LKIPPRCMFDHPDAEKTLNHLISGFENFEKKINYSFKNKAYLLQAFTHASYHYNTITDCY 1700
Query: 149 QRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
QRLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+
Sbjct: 1701 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAV 1760
Query: 209 SPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEY 268
SP L+ + F Q Q +N E +G ++ + +++ E
Sbjct: 1761 SPELFHVIDDFVQFQMEKN-----------EMQG---------MDSELRRSEEDEEKEED 1800
Query: 269 VDVPKALGDVFEALV 283
++VPKA+GD+FE+L
Sbjct: 1801 IEVPKAMGDIFESLA 1815
>gi|71051733|gb|AAH98796.1| Dicer1 protein [Rattus norvegicus]
Length = 401
Score = 152 bits (383), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 157/310 (50%), Gaps = 60/310 (19%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 8 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 65
Query: 72 ALN--ILPQSKIDVHEALYGP----------HPS----AVRCPEQARGLD----PLRYIP 111
+L +LP K + P PS A P + G D L+ P
Sbjct: 66 SLGLKVLPVIKRTSRDKASYPAQENSSSQQKSPSGSCAAAVSPRSSAGKDLEYGCLKIPP 125
Query: 112 ECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEF 153
C EK+INY F++K++LLQA +H +Y+ N IT YQRLEF
Sbjct: 126 RCMFDHPDAEKTLNHLISGFENFEKKINYIFKNKAYLLQAFTHASYHYNTITDCYQRLEF 185
Query: 154 LGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLY 213
LGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP L+
Sbjct: 186 LGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELF 245
Query: 214 ENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPK 273
+ F Q Q +N E +G ++ + +++ E ++VPK
Sbjct: 246 HVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDIEVPK 285
Query: 274 ALGDVFEALV 283
A+GD+FE+L
Sbjct: 286 AMGDIFESLA 295
>gi|444518375|gb|ELV12129.1| Endoribonuclease Dicer [Tupaia chinensis]
Length = 974
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/313 (33%), Positives = 156/313 (49%), Gaps = 63/313 (20%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 578 FWNPSEESCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 635
Query: 72 ALN--ILP---------------------QSKIDVHEALYGPHPSAVRCPEQARGLDPLR 108
+L +LP Q + V A P S+ P + L+
Sbjct: 636 SLGLKVLPVIKRTGPEKAVCPAQEDSSSQQKALSVSCAAATPAASSRPAPLKDLEYGCLK 695
Query: 109 YIPECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQR 150
P C EK+INY F++K++LLQA +H +Y+ N IT YQR
Sbjct: 696 IPPRCMFDHPDADKTLTHLISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQR 755
Query: 151 LEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSP 210
LEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP
Sbjct: 756 LEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSP 815
Query: 211 RLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVD 270
L+ + F Q Q +N E +G ++ + +++ E ++
Sbjct: 816 ELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDIE 855
Query: 271 VPKALGDVFEALV 283
VPKA+GD+FE+L
Sbjct: 856 VPKAMGDIFESLA 868
>gi|109478606|ref|XP_001068155.1| PREDICTED: endoribonuclease Dicer [Rattus norvegicus]
gi|109479876|ref|XP_001069041.1| PREDICTED: endoribonuclease Dicer [Rattus norvegicus]
gi|149025439|gb|EDL81806.1| rCG20888 [Rattus norvegicus]
Length = 1918
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 157/310 (50%), Gaps = 60/310 (19%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1525 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1582
Query: 72 ALN--ILPQSKIDVHEALYGP----------HPS----AVRCPEQARGLD----PLRYIP 111
+L +LP K + P PS A P + G D L+ P
Sbjct: 1583 SLGLKVLPVIKRTSRDKASYPAQENSSSQQKSPSGSCAAAVSPRSSAGKDLEYGCLKIPP 1642
Query: 112 ECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEF 153
C EK+INY F++K++LLQA +H +Y+ N IT YQRLEF
Sbjct: 1643 RCMFDHPDAEKTLNHLISGFENFEKKINYIFKNKAYLLQAFTHASYHYNTITDCYQRLEF 1702
Query: 154 LGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLY 213
LGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP L+
Sbjct: 1703 LGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELF 1762
Query: 214 ENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPK 273
+ F Q Q +N E +G ++ + +++ E ++VPK
Sbjct: 1763 HVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDIEVPK 1802
Query: 274 ALGDVFEALV 283
A+GD+FE+L
Sbjct: 1803 AMGDIFESLA 1812
>gi|195124758|ref|XP_002006854.1| GI21295 [Drosophila mojavensis]
gi|193911922|gb|EDW10789.1| GI21295 [Drosophila mojavensis]
Length = 1728
Score = 151 bits (382), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 94/285 (32%), Positives = 148/285 (51%), Gaps = 45/285 (15%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALY 88
SS NF L ++++ DK++AD +E++ GV +++ G+ L+ I L
Sbjct: 1356 SSEINFCLGQVQMPDKLIADTLEAILGVVVKNYGLHHGFRMLEYFGICKPDNGKPLTQLL 1415
Query: 89 GPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSY 148
R + ++ LEK + YTF D+++LLQAL+HP+ NR+T Y
Sbjct: 1416 DLQLGGSRMRTNISQHEVDGFLINHQYLEKNLGYTFCDRAYLLQALTHPSNPTNRLTGCY 1475
Query: 149 QRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
Q LEF+GDAI+DFL++AY++E+ + ++PG+++D+RSA+VNN T A VR H +L +
Sbjct: 1476 QELEFIGDAILDFLISAYIFEHKTRMTPGQLTDLRSALVNNTTLACICVRHRFHFFILAE 1535
Query: 209 SPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYG----- 263
+ L E++ F Q QE +NH +++ + L+EEKDVQ +
Sbjct: 1536 NALLSESIQNFVQFQETQNHRVTNH--------------VRILMEEKDVQPEPLDSDEEL 1581
Query: 264 --------------------RVVEY-----VDVPKALGDVFEALV 283
+V E+ VDVPKALGDV EAL+
Sbjct: 1582 EMAELAAKQAKPAIREADAPKVGEFNISHNVDVPKALGDVLEALI 1626
>gi|390332898|ref|XP_790894.2| PREDICTED: endoribonuclease Dicer-like [Strongylocentrotus
purpuratus]
Length = 1815
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 97/299 (32%), Positives = 153/299 (51%), Gaps = 59/299 (19%)
Query: 16 TEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI 75
T G K +P Y + + DK +AD VE+L G YL SCG A+L + + +
Sbjct: 1443 TYTGAKTQDLGSVPQLPYEIHTQHSMSDKSIADCVEALIGCYLVSCGFRSALLIMAWMGL 1502
Query: 76 -------------------LPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQL 116
LP + + V LYG ++ PE LR +P +
Sbjct: 1503 DVLPTIDGQSNKRNDQSSDLPAADLPV-SCLYG----YLKQPESPL----LRSVPNAEDV 1553
Query: 117 -----------EKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTA 165
EK INY F+D+++LLQA +H +Y+ N IT YQRLEFLGDA++D+L+T
Sbjct: 1554 LQHQLVGYDGFEKTINYRFRDRAYLLQAFTHSSYHRNSITDCYQRLEFLGDALLDYLITR 1613
Query: 166 YLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEA 225
+LY++ ++LSPG ++D+RSA+VNN FAS AV+ + HK+ + +++ + F +A
Sbjct: 1614 HLYDHHTNLSPGALTDLRSALVNNTIFASLAVKFNFHKYFKAYTANMFQVIDNFVTFVDA 1673
Query: 226 RNHEIS-DEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+N + D + + E +G E++ D ++VPKALGD+FE++
Sbjct: 1674 KNEALGMDSQLKYSEMDG-----------EQEESED--------IEVPKALGDIFESVA 1713
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 28/41 (68%)
Query: 149 QRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
+RLE LGD+ + VTAYLY + HL G++S +RS V+N
Sbjct: 1274 ERLEMLGDSFLKQAVTAYLYCTYPHLDEGKLSFLRSKQVSN 1314
>gi|402595090|gb|EJW89016.1| type III restriction enzyme [Wuchereria bancrofti]
Length = 1410
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 92/281 (32%), Positives = 157/281 (55%), Gaps = 22/281 (7%)
Query: 4 LSNLDFDLYQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGI 63
+ ++F + DG++++ LP YN L + LGDK +AD VESL G +L G
Sbjct: 1040 IETIEFPKNMTTSWDGEEITP---LP---YNLLTQQSLGDKSIADAVESLIGAHLLELGP 1093
Query: 64 EGAMLFLQALNI-LPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINY 122
+ F++ L + + + + + L + + + R L+ L + ++LE I Y
Sbjct: 1094 TATLKFMKWLGLKVLTEPVQMEQPLLRFIDTTDQPDKSLRKLNDLWIQFQFSKLEDCIGY 1153
Query: 123 TFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDI 182
F D+++LLQA +H +Y NRIT YQRLEFLGDA++D+++T +L+++ SH SPG ++D+
Sbjct: 1154 RFNDRAYLLQAFTHASYYKNRITGCYQRLEFLGDAVLDYVITRFLFQHSSHYSPGVLTDL 1213
Query: 183 RSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEG 242
RSA+VNN FAS AV+ + HKH + PRL+ + +F +N ++ EE
Sbjct: 1214 RSALVNNTIFASLAVKYNFHKHFIAMCPRLHHMIEKFVCLCAEKNLSSANFNEE------ 1267
Query: 243 IVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+++ + ++ E ++VPKA+GD+FE++
Sbjct: 1268 ------MYMVT---TEEEIDEGEEEDIEVPKAMGDIFESVA 1299
>gi|195380844|ref|XP_002049171.1| GJ20897 [Drosophila virilis]
gi|194143968|gb|EDW60364.1| GJ20897 [Drosophila virilis]
Length = 1722
Score = 151 bits (382), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 95/289 (32%), Positives = 156/289 (53%), Gaps = 54/289 (18%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEAL- 87
SS NF + +++ DK++AD +E+L GV +++ G++ L+ I K D+ + L
Sbjct: 1351 SSEINFCVGLVQMPDKLIADTLEALLGVVVKNYGLQHGFRMLEYFGI---CKSDIGKPLT 1407
Query: 88 ----YGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANR 143
+ +R R +D ++ LE+ + YTF+D+++LLQAL+HP+ NR
Sbjct: 1408 QLLDLQLGSARMRTNISQREVDG--FLINHQHLEQNLGYTFRDRAYLLQALTHPSNPTNR 1465
Query: 144 ITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHK 203
+T YQ LEF+GDAI+DFL++AY++E+ + ++PG+++D+RSA+VNN T A VR H
Sbjct: 1466 LTGCYQELEFIGDAILDFLISAYIFEHKTRMTPGQLTDLRSALVNNTTLACICVRHRFHF 1525
Query: 204 HLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTD--- 260
+L ++ L E++ F Q QE++NH +++ + L+EE DVQ +
Sbjct: 1526 FILAENALLTESIQSFVQFQESQNHRVTNH--------------VRILMEESDVQPEPLD 1571
Query: 261 -----------------VYG---------RVVEYVDVPKALGDVFEALV 283
+ G + VDVPKALGDV EAL+
Sbjct: 1572 SDDELELAEAAQQQKLAINGADAPHVGEFNISHNVDVPKALGDVLEALI 1620
>gi|345803797|ref|XP_868526.2| PREDICTED: endoribonuclease Dicer isoform 4 [Canis lupus familiaris]
Length = 1923
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 155/312 (49%), Gaps = 62/312 (19%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1528 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1585
Query: 72 ALN--ILPQSKIDVHEALYGP----------HPSAVRCPEQARGLDP----------LRY 109
+L +LP K E P + S R L P L+
Sbjct: 1586 SLGLKVLPVMKRTDREKTMCPPRENFSSQQKNLSGGRAAASVASLRPSVLKDLEYGCLKI 1645
Query: 110 IPECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRL 151
P C EK+INY F++K++LLQA +H +Y+ N IT YQRL
Sbjct: 1646 PPRCMFDHPDADKTLNHLISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRL 1705
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPR 211
EFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP
Sbjct: 1706 EFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPE 1765
Query: 212 LYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDV 271
L+ + F Q Q +N E +G ++ + +++ E ++V
Sbjct: 1766 LFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDIEV 1805
Query: 272 PKALGDVFEALV 283
PKA+GD+FE+L
Sbjct: 1806 PKAMGDIFESLA 1817
>gi|74204500|dbj|BAE23515.1| unnamed protein product [Mus musculus]
Length = 514
Score = 151 bits (381), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 158/311 (50%), Gaps = 62/311 (19%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 121 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 178
Query: 72 ALN--ILPQSKIDVHE---------------ALYGPHPSAVRCPEQARGLD----PLRYI 110
+L +LP K E +L G S V P + G D L+
Sbjct: 179 SLGLKVLPVIKRTSREKALDPAQENGSSQQKSLSGSCASPVG-PRSSAGKDLEYGCLKIP 237
Query: 111 PECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLE 152
P C EK+INY F++K++LLQA +H +Y+ N IT YQRLE
Sbjct: 238 PRCMFDHPDAEKTLNHLISGFETFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLE 297
Query: 153 FLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
FLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP L
Sbjct: 298 FLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPEL 357
Query: 213 YENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVP 272
+ + F + Q +N E +G ++ + +++ E ++VP
Sbjct: 358 FHVIDDFVKFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDIEVP 397
Query: 273 KALGDVFEALV 283
KA+GD+FE+L
Sbjct: 398 KAMGDIFESLA 408
>gi|449280710|gb|EMC87946.1| Endoribonuclease Dicer [Columba livia]
Length = 1922
Score = 151 bits (381), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 160/312 (51%), Gaps = 62/312 (19%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ + + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1527 FWNPSEENCGLDAGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1584
Query: 72 ALN--ILPQ-SKIDVHEALYG-----------PHPSAVRC------PEQARGLD--PLRY 109
+L +LP K D AL P P++ P + L+ L+
Sbjct: 1585 SLGLKVLPVIKKTDWEGALCATRENCNSEQKNPSPNSFSASVANSEPSLYKDLEYGCLKI 1644
Query: 110 IPECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRL 151
P C EK+INY+F++K++LLQA +H +Y+ N IT YQRL
Sbjct: 1645 PPRCMFDHPDAEKTLNHLISGFENFEKKINYSFKNKAYLLQAFTHASYHYNTITDCYQRL 1704
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPR 211
EFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP
Sbjct: 1705 EFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPE 1764
Query: 212 LYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDV 271
L+ + F Q Q +N E +G ++ + +++ E ++V
Sbjct: 1765 LFHVIDDFVQFQMEKN-----------EMQG---------MDSELRRSEEDEEKEEDIEV 1804
Query: 272 PKALGDVFEALV 283
PKA+GD+FE+L
Sbjct: 1805 PKAMGDIFESLA 1816
>gi|312069719|ref|XP_003137813.1| hypothetical protein LOAG_02227 [Loa loa]
gi|307767024|gb|EFO26258.1| hypothetical protein LOAG_02227 [Loa loa]
Length = 1928
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 88/259 (33%), Positives = 146/259 (56%), Gaps = 16/259 (6%)
Query: 26 EKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI-LPQSKIDVH 84
E++ YN L + LGDK +AD VESL G +L G + F++ L + + + V
Sbjct: 1574 EEITPLPYNLLTQQSLGDKSIADAVESLIGAHLLELGPTATLRFMKWLGLKVLTEPVQVE 1633
Query: 85 EALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRI 144
L + + + R L+ L + ++LE I Y F D+++LLQA +H +Y NRI
Sbjct: 1634 PPLLRFIDTTEQPDKSLRKLNDLWVQFQFSKLEDFIGYRFNDRAYLLQAFTHASYYKNRI 1693
Query: 145 TTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKH 204
T YQRLEFLGDA++D+++T +L+++ SH SPG ++D+RSA+VNN FAS A++ + HKH
Sbjct: 1694 TGCYQRLEFLGDAVLDYVITRFLFQHSSHYSPGVLTDLRSALVNNTIFASLAIKHNFHKH 1753
Query: 205 LLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGR 264
+ PRL+ + +F +N ++ EE +++ + ++
Sbjct: 1754 FIAMCPRLHHMIEKFVCLCTEKNLSSANFNEE------------MYMVT---TEEEIDEG 1798
Query: 265 VVEYVDVPKALGDVFEALV 283
E ++VPKA+GD+FE++
Sbjct: 1799 EEEDIEVPKAMGDIFESVA 1817
>gi|322798617|gb|EFZ20221.1| hypothetical protein SINV_06556 [Solenopsis invicta]
Length = 386
Score = 150 bits (380), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 77/154 (50%), Positives = 106/154 (68%), Gaps = 19/154 (12%)
Query: 130 LLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
+ QA +HP+Y AN +T YQRLEFLGDAI+DFL+T Y+YE +LSPGE++D+RSA+VNN
Sbjct: 148 IFQAFTHPSYTANGLTECYQRLEFLGDAILDFLITCYIYEKCGNLSPGELTDLRSALVNN 207
Query: 190 VTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIF 249
+TFA AVR LH LL +P+L E + RF + QE R++ ++DE L++
Sbjct: 208 ITFACLAVRYGLHIALLAYAPKLDEIIDRFVKFQEDRDYVVNDE-------------LLY 254
Query: 250 FLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
LIEE++ +VEYVDVPK LGD+FE+L+
Sbjct: 255 VLIEEEECN------LVEYVDVPKVLGDLFESLI 282
>gi|117168271|ref|NP_683750.2| endoribonuclease Dicer [Mus musculus]
gi|225000568|gb|AAI72621.1| Dicer1, Dcr-1 homolog (Drosophila) [synthetic construct]
Length = 1906
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 158/311 (50%), Gaps = 62/311 (19%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1513 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1570
Query: 72 ALN--ILPQSKIDVHE---------------ALYGPHPSAVRCPEQARGLD----PLRYI 110
+L +LP K E +L G S V P + G D L+
Sbjct: 1571 SLGLKVLPVIKRTSREKALDPAQENGSSQQKSLSGSCASPVG-PRSSAGKDLEYGCLKIP 1629
Query: 111 PECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLE 152
P C EK+INY F++K++LLQA +H +Y+ N IT YQRLE
Sbjct: 1630 PRCMFDHPDAEKTLNHLISGFETFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLE 1689
Query: 153 FLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
FLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP L
Sbjct: 1690 FLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPEL 1749
Query: 213 YENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVP 272
+ + F + Q +N E +G ++ + +++ E ++VP
Sbjct: 1750 FHVIDDFVKFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDIEVP 1789
Query: 273 KALGDVFEALV 283
KA+GD+FE+L
Sbjct: 1790 KAMGDIFESLA 1800
>gi|281427125|ref|NP_001163918.1| dicer 1, ribonuclease type III [Xenopus laevis]
gi|261826170|gb|ACX94846.1| truncated double-stranded RNA-specific endoribonuclease type III
[Xenopus laevis]
Length = 1795
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 93/239 (38%), Positives = 132/239 (55%), Gaps = 31/239 (12%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1501 FWNPSEENGGADAGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1558
Query: 72 ALN--ILPQ---------------------SKIDVHEALYGPHPSAVRC----PEQARGL 104
+L+ +LP+ S++ YG RC PE + L
Sbjct: 1559 SLDLKVLPEVRKPVTNTSTRGNYSLDGRTNSELSCKGIEYGYLKIPPRCMFEHPEAEKTL 1618
Query: 105 DPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVT 164
D L I EK+INY F++K++LLQA +H +Y+ N IT YQRLEFLGDAI+D+L+T
Sbjct: 1619 DHL--ISGFENFEKKINYQFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLIT 1676
Query: 165 AYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQ 223
+LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP L+ + F Q Q
Sbjct: 1677 KHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAISPELFHVIDDFVQFQ 1735
>gi|148686841|gb|EDL18788.1| Dicer1, Dcr-1 homolog (Drosophila), isoform CRA_b [Mus musculus]
Length = 1908
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 158/311 (50%), Gaps = 62/311 (19%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1515 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1572
Query: 72 ALN--ILPQSKIDVHE---------------ALYGPHPSAVRCPEQARGLD----PLRYI 110
+L +LP K E +L G S V P + G D L+
Sbjct: 1573 SLGLKVLPVIKRTSREKALDPAQENGSSQQKSLSGSCASPVG-PRSSAGKDLEYGCLKIP 1631
Query: 111 PECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLE 152
P C EK+INY F++K++LLQA +H +Y+ N IT YQRLE
Sbjct: 1632 PRCMFDHPDAEKTLNHLISGFETFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLE 1691
Query: 153 FLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
FLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP L
Sbjct: 1692 FLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPEL 1751
Query: 213 YENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVP 272
+ + F + Q +N E +G ++ + +++ E ++VP
Sbjct: 1752 FHVIDDFVKFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDIEVP 1791
Query: 273 KALGDVFEALV 283
KA+GD+FE+L
Sbjct: 1792 KAMGDIFESLA 1802
>gi|148686840|gb|EDL18787.1| Dicer1, Dcr-1 homolog (Drosophila), isoform CRA_a [Mus musculus]
Length = 1916
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 158/311 (50%), Gaps = 62/311 (19%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1523 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1580
Query: 72 ALN--ILPQSKIDVHE---------------ALYGPHPSAVRCPEQARGLD----PLRYI 110
+L +LP K E +L G S V P + G D L+
Sbjct: 1581 SLGLKVLPVIKRTSREKALDPAQENGSSQQKSLSGSCASPVG-PRSSAGKDLEYGCLKIP 1639
Query: 111 PECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLE 152
P C EK+INY F++K++LLQA +H +Y+ N IT YQRLE
Sbjct: 1640 PRCMFDHPDAEKTLNHLISGFETFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLE 1699
Query: 153 FLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
FLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP L
Sbjct: 1700 FLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPEL 1759
Query: 213 YENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVP 272
+ + F + Q +N E +G ++ + +++ E ++VP
Sbjct: 1760 FHVIDDFVKFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDIEVP 1799
Query: 273 KALGDVFEALV 283
KA+GD+FE+L
Sbjct: 1800 KAMGDIFESLA 1810
>gi|22830885|dbj|BAC15765.1| double-strand-specific ribonuclease MDCR [Mus musculus]
Length = 1906
Score = 150 bits (379), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 158/311 (50%), Gaps = 62/311 (19%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1513 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1570
Query: 72 ALN--ILPQSKIDVHE---------------ALYGPHPSAVRCPEQARGLD----PLRYI 110
+L +LP K E +L G S V P + G D L+
Sbjct: 1571 SLGLKVLPVIKRTSREKALDPAQENGSSQQKSLSGSCASPVG-PRSSAGKDLEYGCLKIP 1629
Query: 111 PECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLE 152
P C EK+INY F++K++LLQA +H +Y+ N IT YQRLE
Sbjct: 1630 PRCMFDHPDAEKTLNHLISGFETFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLE 1689
Query: 153 FLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
FLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP L
Sbjct: 1690 FLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPEL 1749
Query: 213 YENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVP 272
+ + F + Q +N E +G ++ + +++ E ++VP
Sbjct: 1750 FHVIDDFVKFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDIEVP 1789
Query: 273 KALGDVFEALV 283
KA+GD+FE+L
Sbjct: 1790 KAMGDIFESLA 1800
>gi|20385913|gb|AAM21495.1|AF430845_1 dicer-like protein [Mus musculus]
Length = 1917
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 156/310 (50%), Gaps = 60/310 (19%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1524 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1581
Query: 72 ALN--ILPQSKIDVHEALYGP--------------HPSAVRCPEQARGLD----PLRYIP 111
+L +LP K E P +A P + G D L+ P
Sbjct: 1582 SLGLKVLPVIKRTSREKALDPAQENGSSQQKSLSGSCAAPVGPRSSAGKDLEYGCLKIPP 1641
Query: 112 ECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEF 153
C EK+INY F++K++LLQA +H +Y+ N IT YQRLEF
Sbjct: 1642 RCMFDHPDAEKTLNHLISGFETFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEF 1701
Query: 154 LGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLY 213
LGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP L+
Sbjct: 1702 LGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELF 1761
Query: 214 ENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPK 273
+ F + Q +N E +G ++ + +++ E ++VPK
Sbjct: 1762 HVIDDFVKFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDIEVPK 1801
Query: 274 ALGDVFEALV 283
A+GD+FE+L
Sbjct: 1802 AMGDIFESLA 1811
>gi|257051057|sp|Q8R418.3|DICER_MOUSE RecName: Full=Endoribonuclease Dicer; AltName:
Full=Double-strand-specific ribonuclease mDCR-1
Length = 1916
Score = 150 bits (378), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 105/310 (33%), Positives = 156/310 (50%), Gaps = 60/310 (19%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1523 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1580
Query: 72 ALN--ILPQSKIDVHEALYGP--------------HPSAVRCPEQARGLD----PLRYIP 111
+L +LP K E P +A P + G D L+ P
Sbjct: 1581 SLGLKVLPVIKRTSREKALDPAQENGSSQQKSLSGSCAAPVGPRSSAGKDLEYGCLKIPP 1640
Query: 112 ECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEF 153
C EK+INY F++K++LLQA +H +Y+ N IT YQRLEF
Sbjct: 1641 RCMFDHPDAEKTLNHLISGFETFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEF 1700
Query: 154 LGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLY 213
LGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP L+
Sbjct: 1701 LGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELF 1760
Query: 214 ENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPK 273
+ F + Q +N E +G ++ + +++ E ++VPK
Sbjct: 1761 HVIDDFVKFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDIEVPK 1800
Query: 274 ALGDVFEALV 283
A+GD+FE+L
Sbjct: 1801 AMGDIFESLA 1810
>gi|241061224|ref|XP_002408099.1| dicer-1, putative [Ixodes scapularis]
gi|215492368|gb|EEC02009.1| dicer-1, putative [Ixodes scapularis]
Length = 1348
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 153/300 (51%), Gaps = 54/300 (18%)
Query: 24 SPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI-LPQSKID 82
+P++ S + ++ DK VAD VE+L G YL CG GA+ ++ + + L Q ++
Sbjct: 964 APKRDSSCAVPVCTSAQVPDKSVADSVEALIGAYLLVCGPVGALKVMKWMGVRLTQCDLE 1023
Query: 83 VHEALYGPHPSAVRCPEQARGLDP-----LRYIPE---------------CTQLEKRINY 122
G S VR G P LR++P +E+ + Y
Sbjct: 1024 -----GGAEGSGVR---GFWGFPPPQTALLRHVPHPEEDLAALMELMADTVADVERALGY 1075
Query: 123 TFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDI 182
TF D+SFLLQA++H +Y NR+T YQRLEFLGDA+ID+LVT YLYE +PG+++D+
Sbjct: 1076 TFVDRSFLLQAVTHASYYRNRLTDCYQRLEFLGDAVIDYLVTRYLYELPRKFNPGQLTDL 1135
Query: 183 RSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQE------ARNHEISDEEEE 236
RS++VNN FAS V+ LH H +P L+ + RF Q E+ DE+ E
Sbjct: 1136 RSSLVNNTFFASLVVKYGLHGCFKHCNPSLFSAIGRFVNYQAQAREEEREEGELPDEDRE 1195
Query: 237 EEEEEGIVRCLIFFLIEEKDVQTDVYGRVVE-------------YVDVPKALGDVFEALV 283
E +E + + + D Y +V+E V+VPKALGD+FE+L+
Sbjct: 1196 ERQEFPDLNAPL------DGAEDDTYWKVLERHYCHEEECQEPEEVEVPKALGDLFESLM 1249
>gi|37360146|dbj|BAC98051.1| mKIAA0928 protein [Mus musculus]
Length = 1475
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 158/311 (50%), Gaps = 62/311 (19%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1082 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1139
Query: 72 ALN--ILPQSKIDVHE---------------ALYGPHPSAVRCPEQARGLD----PLRYI 110
+L +LP K E +L G S V P + G D L+
Sbjct: 1140 SLGLKVLPVIKRTSREKALDPAQENGSSQQKSLSGSCASPVG-PRSSAGKDLEYGCLKIP 1198
Query: 111 PECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLE 152
P C EK+INY F++K++LLQA +H +Y+ N IT YQRLE
Sbjct: 1199 PRCMFDHPDAEKTLNHLISGFETFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLE 1258
Query: 153 FLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
FLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP L
Sbjct: 1259 FLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPEL 1318
Query: 213 YENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVP 272
+ + F + Q +N E +G ++ + +++ E ++VP
Sbjct: 1319 FHVIDDFVKFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDIEVP 1358
Query: 273 KALGDVFEALV 283
KA+GD+FE+L
Sbjct: 1359 KAMGDIFESLA 1369
>gi|170591572|ref|XP_001900544.1| Type III restriction enzyme, res subunit family protein [Brugia
malayi]
gi|158592156|gb|EDP30758.1| Type III restriction enzyme, res subunit family protein [Brugia
malayi]
Length = 1856
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 91/281 (32%), Positives = 156/281 (55%), Gaps = 22/281 (7%)
Query: 4 LSNLDFDLYQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGI 63
+ ++F + DG++++ LP YN L + LGDK +AD VESL G +L G
Sbjct: 1486 IETIEFPKNMTTSWDGEEITP---LP---YNLLTQQSLGDKSIADAVESLIGAHLLELGP 1539
Query: 64 EGAMLFLQALNI-LPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINY 122
+ F++ L + + + + L + + + R L+ L + ++LE I Y
Sbjct: 1540 TATLKFMKWLGLKVLTZPVQMEPPLLRFIDTTDQPDKSLRKLNDLWIQFQFSKLEDCIGY 1599
Query: 123 TFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDI 182
F D+++LLQA +H +Y NRIT YQRLEFLGDA++D+++T +L+++ +H SPG ++D+
Sbjct: 1600 RFHDRAYLLQAFTHASYYKNRITGCYQRLEFLGDAVLDYVITRFLFQHSAHYSPGVLTDL 1659
Query: 183 RSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEG 242
RSA+VNN FAS AV+ + HKH + PRL+ + +F +N ++ EE
Sbjct: 1660 RSALVNNTIFASLAVKYNFHKHFIAMCPRLHHMIEKFVCLCAEKNLSSANFNEE------ 1713
Query: 243 IVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+++ + ++ E ++VPKA+GD+FE++
Sbjct: 1714 ------MYMVT---TEEEIDEGEEEDIEVPKAMGDIFESVA 1745
>gi|6102924|emb|CAB59269.1| hypothetical protein [Homo sapiens]
Length = 525
Score = 150 bits (378), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 159/314 (50%), Gaps = 66/314 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 130 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 187
Query: 72 ALN--ILPQSK-IDVHEAL-----------------------------------YGPHPS 93
+L +LP K D +AL YG
Sbjct: 188 SLGLKVLPVIKRTDREKALCPTRENFNSQQKNLSVSCAAASVASSRSSVLKDSEYGCLKI 247
Query: 94 AVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
RC P+ + L+ L I EK+INY F++K++LLQA +H +Y+ N IT YQ
Sbjct: 248 PPRCMFDHPDADKTLNHL--ISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQ 305
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ S
Sbjct: 306 RLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVS 365
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + F Q Q +N E +G ++ + +++ E +
Sbjct: 366 PELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDI 405
Query: 270 DVPKALGDVFEALV 283
+VPKA+GD+FE+L
Sbjct: 406 EVPKAMGDIFESLA 419
>gi|440907259|gb|ELR57423.1| Endoribonuclease Dicer [Bos grunniens mutus]
Length = 1922
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 156/312 (50%), Gaps = 62/312 (19%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1527 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1584
Query: 72 ALN--ILPQSK---------------IDVHEALYGPHPSAVRCPEQARGLDPLRY----- 109
+L +LP K + L G +A +A L L Y
Sbjct: 1585 SLGLKVLPVIKRTDREKAMCPTRENFTSQQKNLSGSRAAASGAGYRASVLKDLEYGCLKI 1644
Query: 110 IPECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRL 151
P C EK+INY F++K++LLQA +H +Y+ N IT YQRL
Sbjct: 1645 PPRCMFDHPDADRTLRHLISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRL 1704
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPR 211
EFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP
Sbjct: 1705 EFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPE 1764
Query: 212 LYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDV 271
L+ + F Q Q +N E +G ++ + +++ E ++V
Sbjct: 1765 LFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDIEV 1804
Query: 272 PKALGDVFEALV 283
PKA+GD+FE+L
Sbjct: 1805 PKAMGDIFESLA 1816
>gi|149636857|ref|XP_001510982.1| PREDICTED: endoribonuclease Dicer-like [Ornithorhynchus anatinus]
Length = 1921
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 103/314 (32%), Positives = 156/314 (49%), Gaps = 66/314 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ + + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1526 FWNPSEENCGIDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1583
Query: 72 ALN--ILPQSKIDVHEALYGPHPSAVRCPEQARGL----------------------DPL 107
+L +LP K E+ P + +Q R L L
Sbjct: 1584 SLGLKVLPVIKKTEWESTLSPSTQSFN--DQPRNLLTNYAPASTTNTQSSFYKDMEYGCL 1641
Query: 108 RYIPECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
+ P C E++INY F++K++LLQA +H +Y+ N IT YQ
Sbjct: 1642 KIPPRCMFDHPDAEKTLIHLISGFENFERKINYNFKNKAYLLQAFTHASYHYNTITDCYQ 1701
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ S
Sbjct: 1702 RLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVS 1761
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + F Q Q +N E +G ++ + +++ E +
Sbjct: 1762 PELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDI 1801
Query: 270 DVPKALGDVFEALV 283
+VPKA+GD+FE+L
Sbjct: 1802 EVPKAMGDIFESLA 1815
>gi|193786026|dbj|BAG51002.1| unnamed protein product [Homo sapiens]
Length = 554
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 159/314 (50%), Gaps = 66/314 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 159 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 216
Query: 72 ALN--ILPQSK-IDVHEAL-----------------------------------YGPHPS 93
+L +LP K D +AL YG
Sbjct: 217 SLGLKVLPVIKRTDREKALCPTRENFNSQQKNLSVSCAAASVASSRSSVLKDSEYGCLKI 276
Query: 94 AVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
RC P+ + L+ L I EK+INY F++K++LLQA +H +Y+ N IT YQ
Sbjct: 277 PPRCMFDHPDADKTLNHL--ISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQ 334
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ S
Sbjct: 335 RLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVS 394
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + F Q Q +N E +G ++ + +++ E +
Sbjct: 395 PELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDI 434
Query: 270 DVPKALGDVFEALV 283
+VPKA+GD+FE+L
Sbjct: 435 EVPKAMGDIFESLA 448
>gi|431839251|gb|ELK01178.1| Endoribonuclease Dicer [Pteropus alecto]
Length = 1921
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 153/312 (49%), Gaps = 62/312 (19%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1526 FWNPSEESCGVDAGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1583
Query: 72 ALN--ILPQSKIDVHEALYGP-------------HPSAVRCPEQARG-------LDPLRY 109
+L +LP K E P A C R L+
Sbjct: 1584 SLGLKVLPVVKRTDRETATCPTRESFGSQQKSLSGGRAAACAASPRSPVFKDLEYGCLKI 1643
Query: 110 IPECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRL 151
P C EK+INY F++K++LLQA +H +Y+ N IT YQRL
Sbjct: 1644 PPRCMFDHPDADKTLNHLISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRL 1703
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPR 211
EFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP
Sbjct: 1704 EFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPE 1763
Query: 212 LYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDV 271
L+ + F Q Q +N E +G ++ + +++ E ++V
Sbjct: 1764 LFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDIEV 1803
Query: 272 PKALGDVFEALV 283
PKA+GD+FE+L
Sbjct: 1804 PKAMGDIFESLA 1815
>gi|344274190|ref|XP_003408901.1| PREDICTED: endoribonuclease Dicer [Loxodonta africana]
Length = 1920
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 107/314 (34%), Positives = 160/314 (50%), Gaps = 66/314 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1525 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1582
Query: 72 ALN--ILP---------------------QSKIDVHEAL---------------YGPHPS 93
+L +LP Q + V A+ YG
Sbjct: 1583 SLGLKVLPVIKRADRENAGRSARENSNSQQKNLSVSCAVPSGASARTSVLKDLEYGCLKI 1642
Query: 94 AVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
RC P+ + L+ L I EK+INY+F++K++LLQA +H +Y+ N IT YQ
Sbjct: 1643 PPRCMFDHPDADKTLNHL--ISGFENFEKKINYSFKNKAYLLQAFTHASYHYNTITDCYQ 1700
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ S
Sbjct: 1701 RLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVS 1760
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + F Q Q +N E +G ++ + +++ E +
Sbjct: 1761 PELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDI 1800
Query: 270 DVPKALGDVFEALV 283
+VPKA+GD+FE+L
Sbjct: 1801 EVPKAMGDIFESLA 1814
>gi|42733596|ref|NP_976235.1| endoribonuclease Dicer [Bos taurus]
gi|257051053|sp|Q6TUI4.3|DICER_BOVIN RecName: Full=Endoribonuclease Dicer
gi|38679195|gb|AAR26432.1| dicer [Bos taurus]
Length = 1923
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 156/312 (50%), Gaps = 62/312 (19%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1528 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1585
Query: 72 ALN--ILPQSK---------------IDVHEALYGPHPSAVRCPEQARGLDPLRY----- 109
+L +LP K + L G +A +A L L Y
Sbjct: 1586 SLGLKVLPVIKRTDREKAMCPTRENFTSQQKNLSGSRAAASGAGYRASVLKDLEYGCLKI 1645
Query: 110 IPECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRL 151
P C EK+INY F++K++LLQA +H +Y+ N IT YQRL
Sbjct: 1646 PPRCMFDHPEADRTLRHLISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRL 1705
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPR 211
EFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP
Sbjct: 1706 EFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPE 1765
Query: 212 LYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDV 271
L+ + F Q Q +N E +G ++ + +++ E ++V
Sbjct: 1766 LFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDIEV 1805
Query: 272 PKALGDVFEALV 283
PKA+GD+FE+L
Sbjct: 1806 PKAMGDIFESLA 1817
>gi|426248555|ref|XP_004018028.1| PREDICTED: endoribonuclease Dicer [Ovis aries]
Length = 1922
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 156/312 (50%), Gaps = 62/312 (19%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1527 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1584
Query: 72 ALN--ILPQSK---------------IDVHEALYGPHPSAVRCPEQARGLDPLRY----- 109
+L +LP K + L G +A +A L L Y
Sbjct: 1585 SLGLKVLPVIKRTDREKAMCPTRENFTSQQKNLSGSRTAASGAGYRASVLKDLEYGCLKI 1644
Query: 110 IPECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRL 151
P C EK+INY F++K++LLQA +H +Y+ N IT YQRL
Sbjct: 1645 PPRCMFDHPDADRTLRHLISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRL 1704
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPR 211
EFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP
Sbjct: 1705 EFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPE 1764
Query: 212 LYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDV 271
L+ + F Q Q +N E +G ++ + +++ E ++V
Sbjct: 1765 LFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDIEV 1804
Query: 272 PKALGDVFEALV 283
PKA+GD+FE+L
Sbjct: 1805 PKAMGDIFESLA 1816
>gi|296475171|tpg|DAA17286.1| TPA: endoribonuclease Dicer [Bos taurus]
Length = 1922
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 156/312 (50%), Gaps = 62/312 (19%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1528 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1585
Query: 72 ALN--ILPQSK---------------IDVHEALYGPHPSAVRCPEQARGLDPLRY----- 109
+L +LP K + L G +A +A L L Y
Sbjct: 1586 SLGLKVLPVIKRTDREKAMCPTRENFTSQQKNLSGSRAAASGAGYRASVLKDLEYGCLKI 1645
Query: 110 IPECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRL 151
P C EK+INY F++K++LLQA +H +Y+ N IT YQRL
Sbjct: 1646 PPRCMFDHPEADRTLRHLISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRL 1705
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPR 211
EFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP
Sbjct: 1706 EFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPE 1765
Query: 212 LYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDV 271
L+ + F Q Q +N E +G ++ + +++ E ++V
Sbjct: 1766 LFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDIEV 1805
Query: 272 PKALGDVFEALV 283
PKA+GD+FE+L
Sbjct: 1806 PKAMGDIFESLA 1817
>gi|328905041|gb|AEB54796.1| dicer 2 [Litopenaeus vannamei]
Length = 1502
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 97/274 (35%), Positives = 146/274 (53%), Gaps = 39/274 (14%)
Query: 16 TEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI 75
++D K EK S YN ++ DK +AD VE++ G YL CG E A FL L +
Sbjct: 1144 SDDASKDEKAEK-KGSCYNPWTEHEVSDKSIADCVEAIIGAYLLVCGNEAAAAFLHWLGV 1202
Query: 76 LPQSKIDVHEALYGPHPSAVRCP----EQARGLDPLRYIPECTQLEKRINYTFQDKSFLL 131
+ +L P VR E A+ L +LEK+I YTF+D+SF++
Sbjct: 1203 ----GVFRDNSLLM-EPKTVRTARVRKECAQDLTIFYKKAVLDRLEKKIGYTFRDRSFIV 1257
Query: 132 QALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVT 191
QA++H +Y N++T YQRLEFLGDA++D+LVT +++ F+ SPG++SD+RS V N T
Sbjct: 1258 QAVTHSSYVNNQVTDCYQRLEFLGDAVLDYLVTCHIFCRFTDYSPGQLSDLRSYFVKNDT 1317
Query: 192 FASYAVRLDLHKHLLHDSPRLYENVTRFAQ--NQEARNHEISDEEEEEEEEEGIVRCLIF 249
A + LH+HLLH +P+L ++ +F +Q+ E++ E+
Sbjct: 1318 LGRAAAKGKLHQHLLHLNPKLEASIDKFLSILHQDPLGEELNTED--------------- 1362
Query: 250 FLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
DVQ E V++PKALGD+ EA++
Sbjct: 1363 ------DVQD------CEDVEIPKALGDMVEAII 1384
>gi|80979111|gb|ABB54758.1| Dicer-2 [Drosophila simulans]
Length = 1564
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 140/233 (60%), Gaps = 21/233 (9%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID--VHEA 86
SS NF + + + +KV+AD +E+L GV +++ G++ A L+ I +S ID + E
Sbjct: 1344 SSEVNFCVGLVAIANKVIADTLEALLGVIVKNYGLQHAFKMLEYFKIC-RSDIDKPLTEL 1402
Query: 87 LYGPHPSA-VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRIT 145
L S +R +D ++ + LE + YTF+D+ +LLQAL+HP+Y NRIT
Sbjct: 1403 LNLELGSKNIRANVNTTEIDG--FLINHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRIT 1460
Query: 146 TSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
SYQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH +
Sbjct: 1461 GSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFI 1520
Query: 206 LHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQ 258
L ++ +L E +++F QE++ H +++ + L+EE DVQ
Sbjct: 1521 LAENEKLSETISKFVNFQESQGHRVTN--------------YVHILLEEADVQ 1559
>gi|80979113|gb|ABB54759.1| Dicer-2 [Drosophila simulans]
Length = 1565
Score = 149 bits (376), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 140/233 (60%), Gaps = 21/233 (9%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID--VHEA 86
SS NF + + + +KV+AD +E+L GV +++ G++ A L+ I +S ID + E
Sbjct: 1344 SSEVNFCVGLVAIANKVIADTLEALLGVIVKNYGLQHAFKMLEYFKIC-RSDIDKPLTEL 1402
Query: 87 LYGPHPSA-VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRIT 145
L S +R +D ++ + LE + YTF+D+ +LLQAL+HP+Y NRIT
Sbjct: 1403 LNLELGSKNIRANVNTTEIDG--FLINHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRIT 1460
Query: 146 TSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
SYQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH +
Sbjct: 1461 GSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFI 1520
Query: 206 LHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQ 258
L ++ +L E +++F QE++ H +++ + L+EE DVQ
Sbjct: 1521 LAENEKLSETISKFVNFQESQGHRVTN--------------YVHILLEEADVQ 1559
>gi|80979107|gb|ABB54756.1| Dicer-2 [Drosophila simulans]
Length = 1567
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 87/233 (37%), Positives = 140/233 (60%), Gaps = 21/233 (9%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID--VHEA 86
SS NF + + + +KV+AD +E+L GV +++ G++ A L+ I +S ID + E
Sbjct: 1344 SSEVNFCVGLVAIANKVIADTLEALLGVIVKNYGLQHAFKMLEYFKIC-RSDIDKPLTEL 1402
Query: 87 LYGPHPSA-VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRIT 145
L S +R +D ++ + LE + YTF+D+ +LLQAL+HP+Y NRIT
Sbjct: 1403 LNLELGSKNIRANVNTTEIDG--FLINHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRIT 1460
Query: 146 TSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
SYQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH +
Sbjct: 1461 GSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFI 1520
Query: 206 LHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQ 258
L ++ +L E +++F QE++ H +++ + L+EE DVQ
Sbjct: 1521 LAENEKLSETISKFVNFQESQGHRVTN--------------YVHILLEEADVQ 1559
>gi|114654619|ref|XP_001154369.1| PREDICTED: endoribonuclease Dicer isoform 6 [Pan troglodytes]
gi|410048689|ref|XP_003952618.1| PREDICTED: endoribonuclease Dicer [Pan troglodytes]
gi|410219112|gb|JAA06775.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410256210|gb|JAA16072.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410256212|gb|JAA16073.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410306234|gb|JAA31717.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410306236|gb|JAA31718.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410351815|gb|JAA42511.1| dicer 1, ribonuclease type III [Pan troglodytes]
gi|410351817|gb|JAA42512.1| dicer 1, ribonuclease type III [Pan troglodytes]
Length = 1922
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 159/314 (50%), Gaps = 66/314 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1527 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1584
Query: 72 ALN--ILPQSK-IDVHEAL-----------------------------------YGPHPS 93
+L +LP K D +AL YG
Sbjct: 1585 SLGLKVLPVIKRTDREKALCPTRENFNSQQKNLSVSCAAASVASSRSSVLKDSEYGCLKI 1644
Query: 94 AVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
RC P+ + L+ L I EK+INY F++K++LLQA +H +Y+ N IT YQ
Sbjct: 1645 PPRCMFDHPDADKTLNHL--ISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQ 1702
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ S
Sbjct: 1703 RLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVS 1762
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + F Q Q +N E +G ++ + +++ E +
Sbjct: 1763 PELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDI 1802
Query: 270 DVPKALGDVFEALV 283
+VPKA+GD+FE+L
Sbjct: 1803 EVPKAMGDIFESLA 1816
>gi|193787170|dbj|BAG52376.1| unnamed protein product [Homo sapiens]
Length = 820
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 159/314 (50%), Gaps = 66/314 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 425 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 482
Query: 72 ALN--ILPQSK-IDVHEAL-----------------------------------YGPHPS 93
+L +LP K D +AL YG
Sbjct: 483 SLGLKVLPVIKRTDREKALCPTRENFNSQQKNLSVSCAAASVASSRSSVLKDSEYGCLKI 542
Query: 94 AVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
RC P+ + L+ L I EK+INY F++K++LLQA +H +Y+ N IT YQ
Sbjct: 543 PPRCMFDHPDADKTLNHL--ISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQ 600
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ S
Sbjct: 601 RLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVS 660
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + F Q Q +N E +G ++ + +++ E +
Sbjct: 661 PELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDI 700
Query: 270 DVPKALGDVFEALV 283
+VPKA+GD+FE+L
Sbjct: 701 EVPKAMGDIFESLA 714
>gi|387015528|gb|AFJ49883.1| Endoribonuclease Dicer-like isoform 1 [Crotalus adamanteus]
Length = 1917
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/312 (33%), Positives = 161/312 (51%), Gaps = 62/312 (19%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ + + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1522 FWNPSEENCGIDAGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1579
Query: 72 ALN--ILP---QSKIDVHEALYGPH------PSAVRC-------PEQARGLD----PLRY 109
+L +LP +++ D Y H S+V C E + D L+
Sbjct: 1580 SLGLKVLPVIKKTEWDNVLCSYRDHFNNQQKHSSVNCISATLANQETSHYKDLVYGCLKI 1639
Query: 110 IPECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRL 151
P C EK+INY+F++K++LLQA +H +Y+ N IT YQRL
Sbjct: 1640 PPRCMFDHPDAETTLNHLISGFENFEKKINYSFKNKAYLLQAFTHASYHYNTITDCYQRL 1699
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPR 211
EFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP
Sbjct: 1700 EFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPE 1759
Query: 212 LYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDV 271
L+ + F Q Q +N E +G ++ + +++ E ++V
Sbjct: 1760 LFHVIDDFVQFQMEKN-----------EMQG---------MDSELRRSEEDEEKEEDIEV 1799
Query: 272 PKALGDVFEALV 283
PKA+GD+FE+L
Sbjct: 1800 PKAMGDIFESLA 1811
>gi|119602001|gb|EAW81595.1| Dicer1, Dcr-1 homolog (Drosophila), isoform CRA_a [Homo sapiens]
Length = 1923
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 159/314 (50%), Gaps = 66/314 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1528 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1585
Query: 72 ALN--ILPQSK-IDVHEAL-----------------------------------YGPHPS 93
+L +LP K D +AL YG
Sbjct: 1586 SLGLKVLPVIKRTDREKALCPTRENFNSQQKNLSVSCAAASVASSRSSVLKDSEYGCLKI 1645
Query: 94 AVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
RC P+ + L+ L I EK+INY F++K++LLQA +H +Y+ N IT YQ
Sbjct: 1646 PPRCMFDHPDADKTLNHL--ISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQ 1703
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ S
Sbjct: 1704 RLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVS 1763
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + F Q Q +N E +G ++ + +++ E +
Sbjct: 1764 PELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDI 1803
Query: 270 DVPKALGDVFEALV 283
+VPKA+GD+FE+L
Sbjct: 1804 EVPKAMGDIFESLA 1817
>gi|355778829|gb|EHH63865.1| hypothetical protein EGM_16920 [Macaca fascicularis]
Length = 1910
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 159/314 (50%), Gaps = 66/314 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1515 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1572
Query: 72 ALN--ILPQSK-IDVHEAL-----------------------------------YGPHPS 93
+L +LP K D +AL YG
Sbjct: 1573 SLGLKVLPVIKRTDREKALCPTRENFNSQQKNLSVSCAAASMASSRSSVLKDLEYGCLKI 1632
Query: 94 AVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
RC P+ + L+ L I EK+INY F++K++LLQA +H +Y+ N IT YQ
Sbjct: 1633 PPRCMFDHPDADKTLNHL--ISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQ 1690
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ S
Sbjct: 1691 RLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVS 1750
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + F Q Q +N E +G ++ + +++ E +
Sbjct: 1751 PELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDI 1790
Query: 270 DVPKALGDVFEALV 283
+VPKA+GD+FE+L
Sbjct: 1791 EVPKAMGDIFESLA 1804
>gi|195425457|ref|XP_002061021.1| GK10670 [Drosophila willistoni]
gi|194157106|gb|EDW72007.1| GK10670 [Drosophila willistoni]
Length = 1720
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 97/280 (34%), Positives = 151/280 (53%), Gaps = 42/280 (15%)
Query: 31 SSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALY- 88
S NF + + KL +KVVAD +E+L GV +++ G++ L+ I Q +D+ + L
Sbjct: 1354 SEMNFCIGKSKLSNKVVADTLEALLGVIVKNYGVQHGFRILEYFGICKQ--VDIGKPLSQ 1411
Query: 89 -------GPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNA 141
A R P + GL + LE+ + YTF+D+++LLQAL+HP+
Sbjct: 1412 LLDLQLGSTRTRADRDPREIDGL-----LINYHYLERNLGYTFKDRAYLLQALTHPSNPT 1466
Query: 142 NRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
NR+T YQ LEF+GDAI+DFL++AY++E ++PG+++D+RSA+VNN T A VR
Sbjct: 1467 NRLTGCYQELEFIGDAILDFLISAYIFERNIRMNPGQLTDLRSALVNNTTLACICVRHRF 1526
Query: 202 HKHLLHDSPRLYENVTRFAQNQEARNHEIS------------------DEEEEEEEEEGI 243
H +L ++ L E++ F QE H ++ DEE+E E + +
Sbjct: 1527 HLFILAENTLLTESINSFVDFQEKHMHRVTHHVRILLEENDIQCHNPLDEEDELEMADNL 1586
Query: 244 VRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+E + ++ + E VDVPKALGDV EAL+
Sbjct: 1587 STN------DEPLAKGNL--NMSENVDVPKALGDVVEALI 1618
>gi|426377909|ref|XP_004055696.1| PREDICTED: endoribonuclease Dicer isoform 1 [Gorilla gorilla gorilla]
gi|426377911|ref|XP_004055697.1| PREDICTED: endoribonuclease Dicer isoform 2 [Gorilla gorilla gorilla]
gi|426377913|ref|XP_004055698.1| PREDICTED: endoribonuclease Dicer isoform 3 [Gorilla gorilla gorilla]
Length = 1922
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 159/314 (50%), Gaps = 66/314 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1527 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1584
Query: 72 ALN--ILPQSK-IDVHEAL-----------------------------------YGPHPS 93
+L +LP K D +AL YG
Sbjct: 1585 SLGLKVLPVIKRTDREKALCPTRENFNNQQKNLSVSCAAASVASSRSSVLKDSEYGCLKI 1644
Query: 94 AVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
RC P+ + L+ L I EK+INY F++K++LLQA +H +Y+ N IT YQ
Sbjct: 1645 PPRCMFDHPDADKTLNHL--ISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQ 1702
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ S
Sbjct: 1703 RLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVS 1762
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + F Q Q +N E +G ++ + +++ E +
Sbjct: 1763 PELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDI 1802
Query: 270 DVPKALGDVFEALV 283
+VPKA+GD+FE+L
Sbjct: 1803 EVPKAMGDIFESLA 1816
>gi|397525875|ref|XP_003832878.1| PREDICTED: endoribonuclease Dicer isoform 1 [Pan paniscus]
gi|397525877|ref|XP_003832879.1| PREDICTED: endoribonuclease Dicer isoform 2 [Pan paniscus]
Length = 1922
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 159/314 (50%), Gaps = 66/314 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1527 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1584
Query: 72 ALN--ILPQSK-IDVHEAL-----------------------------------YGPHPS 93
+L +LP K D +AL YG
Sbjct: 1585 SLGLKVLPVIKRTDREKALCPTRENFNSQQKNLSVSCAAASVASSRSSVLKDSEYGCLKI 1644
Query: 94 AVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
RC P+ + L+ L I EK+INY F++K++LLQA +H +Y+ N IT YQ
Sbjct: 1645 PPRCMFDHPDADKTLNHL--ISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQ 1702
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ S
Sbjct: 1703 RLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVS 1762
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + F Q Q +N E +G ++ + +++ E +
Sbjct: 1763 PELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDI 1802
Query: 270 DVPKALGDVFEALV 283
+VPKA+GD+FE+L
Sbjct: 1803 EVPKAMGDIFESLA 1816
>gi|21665773|emb|CAB38857.2| hypothetical helicase K12H4.8-like protein [Homo sapiens]
Length = 1912
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 159/314 (50%), Gaps = 66/314 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1517 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1574
Query: 72 ALN--ILPQSK-IDVHEAL-----------------------------------YGPHPS 93
+L +LP K D +AL YG
Sbjct: 1575 SLGLKVLPVIKRTDREKALCPTRENFNSQQKNLSVSCAAASVASSRSSVLKDSEYGCLKI 1634
Query: 94 AVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
RC P+ + L+ L I EK+INY F++K++LLQA +H +Y+ N IT YQ
Sbjct: 1635 PPRCMFDHPDADKTLNHL--ISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQ 1692
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ S
Sbjct: 1693 RLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVS 1752
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + F Q Q +N E +G ++ + +++ E +
Sbjct: 1753 PELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDI 1792
Query: 270 DVPKALGDVFEALV 283
+VPKA+GD+FE+L
Sbjct: 1793 EVPKAMGDIFESLA 1806
>gi|29294649|ref|NP_085124.2| endoribonuclease Dicer isoform 1 [Homo sapiens]
gi|29294651|ref|NP_803187.1| endoribonuclease Dicer isoform 1 [Homo sapiens]
gi|404312696|ref|NP_001258211.1| endoribonuclease Dicer isoform 1 [Homo sapiens]
gi|257051056|sp|Q9UPY3.3|DICER_HUMAN RecName: Full=Endoribonuclease Dicer; AltName: Full=Helicase with
RNase motif; Short=Helicase MOI
gi|20521696|dbj|BAA76772.2| KIAA0928 protein [Homo sapiens]
gi|119602002|gb|EAW81596.1| Dicer1, Dcr-1 homolog (Drosophila), isoform CRA_b [Homo sapiens]
gi|152012889|gb|AAI50288.1| Dicer 1, ribonuclease type III [Homo sapiens]
gi|307685563|dbj|BAJ20712.1| dicer 1, ribonuclease type III [synthetic construct]
Length = 1922
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 159/314 (50%), Gaps = 66/314 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1527 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1584
Query: 72 ALN--ILPQSK-IDVHEAL-----------------------------------YGPHPS 93
+L +LP K D +AL YG
Sbjct: 1585 SLGLKVLPVIKRTDREKALCPTRENFNSQQKNLSVSCAAASVASSRSSVLKDSEYGCLKI 1644
Query: 94 AVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
RC P+ + L+ L I EK+INY F++K++LLQA +H +Y+ N IT YQ
Sbjct: 1645 PPRCMFDHPDADKTLNHL--ISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQ 1702
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ S
Sbjct: 1703 RLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVS 1762
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + F Q Q +N E +G ++ + +++ E +
Sbjct: 1763 PELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDI 1802
Query: 270 DVPKALGDVFEALV 283
+VPKA+GD+FE+L
Sbjct: 1803 EVPKAMGDIFESLA 1816
>gi|126290301|ref|XP_001367933.1| PREDICTED: endoribonuclease Dicer-like [Monodelphis domestica]
Length = 1923
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 159/314 (50%), Gaps = 66/314 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ + + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1528 FWNPSEENCGIDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1585
Query: 72 ALN--ILP---------------------QSKIDVHEAL---------------YGPHPS 93
+L +LP Q + V+ A YG
Sbjct: 1586 SLGLKVLPVIKRSDWETTLYPSKDNFNSQQKNLSVNYASISVANLQSSLYKDLEYGCLKI 1645
Query: 94 AVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
RC P+ + L+ L I EK+INY F++K++LLQA +H +Y+ N IT YQ
Sbjct: 1646 PPRCMFDHPDAEKTLNHL--ISGFENFEKKINYNFKNKAYLLQAFTHASYHYNTITDCYQ 1703
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ S
Sbjct: 1704 RLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVS 1763
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + F Q Q +N E +G ++ + +++ E +
Sbjct: 1764 PELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDI 1803
Query: 270 DVPKALGDVFEALV 283
+VPKA+GD+FE+L
Sbjct: 1804 EVPKAMGDIFESLA 1817
>gi|332223646|ref|XP_003260983.1| PREDICTED: endoribonuclease Dicer isoform 1 [Nomascus leucogenys]
gi|332223648|ref|XP_003260984.1| PREDICTED: endoribonuclease Dicer isoform 2 [Nomascus leucogenys]
gi|441666339|ref|XP_004091884.1| PREDICTED: endoribonuclease Dicer [Nomascus leucogenys]
Length = 1922
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 159/314 (50%), Gaps = 66/314 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1527 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1584
Query: 72 ALN--ILPQSK-IDVHEAL-----------------------------------YGPHPS 93
+L +LP K D +AL YG
Sbjct: 1585 SLGLKVLPVIKRTDREKALCPTRENFNSQQKNLSVSCAAPSVASSRSSVLKDLEYGCLKI 1644
Query: 94 AVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
RC P+ + L+ L I EK+INY F++K++LLQA +H +Y+ N IT YQ
Sbjct: 1645 PPRCMFDHPDADKTLNHL--ISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQ 1702
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ S
Sbjct: 1703 RLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVS 1762
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + F Q Q +N E +G ++ + +++ E +
Sbjct: 1763 PELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDI 1802
Query: 270 DVPKALGDVFEALV 283
+VPKA+GD+FE+L
Sbjct: 1803 EVPKAMGDIFESLA 1816
>gi|383872414|ref|NP_001244801.1| endoribonuclease Dicer [Macaca mulatta]
gi|380811118|gb|AFE77434.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
gi|380811120|gb|AFE77435.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
gi|380811122|gb|AFE77436.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
gi|380811124|gb|AFE77437.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
gi|383417045|gb|AFH31736.1| endoribonuclease Dicer isoform 1 [Macaca mulatta]
Length = 1920
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 159/314 (50%), Gaps = 66/314 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1525 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1582
Query: 72 ALN--ILPQSK-IDVHEAL-----------------------------------YGPHPS 93
+L +LP K D +AL YG
Sbjct: 1583 SLGLKVLPVIKRTDREKALCPTRENFNSQQKNLSVSCAAASMASSRSSVLKDLEYGCLKI 1642
Query: 94 AVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
RC P+ + L+ L I EK+INY F++K++LLQA +H +Y+ N IT YQ
Sbjct: 1643 PPRCMFDHPDADKTLNHL--ISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQ 1700
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ S
Sbjct: 1701 RLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVS 1760
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + F Q Q +N E +G ++ + +++ E +
Sbjct: 1761 PELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDI 1800
Query: 270 DVPKALGDVFEALV 283
+VPKA+GD+FE+L
Sbjct: 1801 EVPKAMGDIFESLA 1814
>gi|297695799|ref|XP_002825114.1| PREDICTED: endoribonuclease Dicer isoform 1 [Pongo abelii]
gi|297695801|ref|XP_002825115.1| PREDICTED: endoribonuclease Dicer isoform 2 [Pongo abelii]
gi|297695803|ref|XP_002825116.1| PREDICTED: endoribonuclease Dicer isoform 3 [Pongo abelii]
Length = 1922
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 159/314 (50%), Gaps = 66/314 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1527 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1584
Query: 72 ALN--ILPQSK-IDVHEAL-----------------------------------YGPHPS 93
+L +LP K D +AL YG
Sbjct: 1585 SLGLKVLPVIKRTDREKALCPTRENFNSQQKNLSVSCAAASVASSRSSVLKDLEYGCLKI 1644
Query: 94 AVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
RC P+ + L+ L I EK+INY F++K++LLQA +H +Y+ N IT YQ
Sbjct: 1645 PPRCMFDHPDADKTLNHL--ISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQ 1702
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ S
Sbjct: 1703 RLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVS 1762
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + F Q Q +N E +G ++ + +++ E +
Sbjct: 1763 PELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDI 1802
Query: 270 DVPKALGDVFEALV 283
+VPKA+GD+FE+L
Sbjct: 1803 EVPKAMGDIFESLA 1816
>gi|5019620|dbj|BAA78691.1| helicase-MOI [Homo sapiens]
Length = 1924
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 159/314 (50%), Gaps = 66/314 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1529 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1586
Query: 72 ALN--ILPQSK-IDVHEAL-----------------------------------YGPHPS 93
+L +LP K D +AL YG
Sbjct: 1587 SLGLKVLPVIKRTDREKALCPTRENFNSQQKNLSVSCAAASVASSRSSVLKDSEYGCLKI 1646
Query: 94 AVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
RC P+ + L+ L I EK+INY F++K++LLQA +H +Y+ N IT YQ
Sbjct: 1647 PPRCMFDHPDADKTLNHL--ISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQ 1704
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ S
Sbjct: 1705 RLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVS 1764
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + F Q Q +N E +G ++ + +++ E +
Sbjct: 1765 PELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDI 1804
Query: 270 DVPKALGDVFEALV 283
+VPKA+GD+FE+L
Sbjct: 1805 EVPKAMGDIFESLA 1818
>gi|402877099|ref|XP_003902280.1| PREDICTED: endoribonuclease Dicer isoform 1 [Papio anubis]
gi|402877101|ref|XP_003902281.1| PREDICTED: endoribonuclease Dicer isoform 2 [Papio anubis]
gi|402877103|ref|XP_003902282.1| PREDICTED: endoribonuclease Dicer isoform 3 [Papio anubis]
Length = 1920
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 159/314 (50%), Gaps = 66/314 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1525 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1582
Query: 72 ALN--ILPQSK-IDVHEAL-----------------------------------YGPHPS 93
+L +LP K D +AL YG
Sbjct: 1583 SLGLKVLPVIKRTDREKALCPTRENFNSQQKNLSVSCAAASVASSRSSVLKDLEYGCLKI 1642
Query: 94 AVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
RC P+ + L+ L I EK+INY F++K++LLQA +H +Y+ N IT YQ
Sbjct: 1643 PPRCMFDHPDADKTLNHL--ISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQ 1700
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ S
Sbjct: 1701 RLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVS 1760
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + F Q Q +N E +G ++ + +++ E +
Sbjct: 1761 PELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDI 1800
Query: 270 DVPKALGDVFEALV 283
+VPKA+GD+FE+L
Sbjct: 1801 EVPKAMGDIFESLA 1814
>gi|395504573|ref|XP_003756622.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer [Sarcophilus
harrisii]
Length = 1924
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 156/315 (49%), Gaps = 68/315 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ + + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1529 FWNPSEENCGIDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1586
Query: 72 ALN--ILPQSK-IDVHEALYGPHPSAVRCPEQARGLD----------------------P 106
+L +LP K D LY PS Q + L
Sbjct: 1587 SLGLKVLPVIKRSDWENTLY---PSKDNFNSQQKNLSVNFASISVANLQSSLYKDLEYGC 1643
Query: 107 LRYIPECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSY 148
L+ P C EK+INY F++K++LLQA +H +Y+ N IT Y
Sbjct: 1644 LKIPPRCMFDYPDAEKTLNHLISGFENFEKKINYNFKNKAYLLQAFTHASYHYNTITDCY 1703
Query: 149 QRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
QRLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+
Sbjct: 1704 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAV 1763
Query: 209 SPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEY 268
SP L+ + F Q Q +N E +G ++ + +++ E
Sbjct: 1764 SPELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEED 1803
Query: 269 VDVPKALGDVFEALV 283
++VPKA+GD+FE+L
Sbjct: 1804 IEVPKAMGDIFESLA 1818
>gi|188593364|emb|CAO78751.1| Oikopleura cytoplasmic RNAse III enzyme Dicer [Oikopleura dioica]
Length = 1814
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/280 (33%), Positives = 149/280 (53%), Gaps = 42/280 (15%)
Query: 7 LDFDLYQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGA 66
D +++ GK +++ E L YN L DK +AD +E+L G YL++ GIE
Sbjct: 1464 FDISVWKPLDTKGKPINTEEPL---IYNHYSDQYLTDKSIADCMEALIGAYLKATGIEAT 1520
Query: 67 MLFL--QALNILPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTF 124
FL L +LP S +D YG + EK+I YTF
Sbjct: 1521 QQFLCYMGLIVLPSSALDKLTRTYG-------------------------EFEKKIGYTF 1555
Query: 125 QDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYEN-FSHLSPGEISDIR 183
++K +LLQ+L+H +Y N++T YQRLEFLGDA++DFL+T +L+++ SPGE++D+R
Sbjct: 1556 KNKGYLLQSLTHASYQYNQVTNCYQRLEFLGDAVLDFLITRHLFDHPTKRFSPGELTDLR 1615
Query: 184 SAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGI 243
+A+VNN FA+ AV+ D HK+L +P L+ + + + R ++ EG+
Sbjct: 1616 AALVNNNIFAALAVKFDFHKYLYALTPDLHNVIRDYVLYCQTR-----------QDVEGM 1664
Query: 244 VRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
L +EE+ + + E ++VPK LGD++E++
Sbjct: 1665 EAVLKRIRLEEEPEEEEGDHEDSEDIEVPKVLGDIYESVA 1704
Score = 40.8 bits (94), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 30/58 (51%)
Query: 149 QRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+RLE LGD + + VT YLY + H G++S RS V+N V D+ ++
Sbjct: 1310 ERLEMLGDCFLKYSVTVYLYCKYEHQHEGQLSFFRSKKVSNRNLFRLGVYNDIPGRMV 1367
>gi|403274211|ref|XP_003928879.1| PREDICTED: endoribonuclease Dicer isoform 1 [Saimiri boliviensis
boliviensis]
gi|403274213|ref|XP_003928880.1| PREDICTED: endoribonuclease Dicer isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1922
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 159/314 (50%), Gaps = 66/314 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1527 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1584
Query: 72 ALN--ILPQSK-IDVHEAL-----------------------------------YGPHPS 93
+L +LP K D +AL YG
Sbjct: 1585 SLGLKVLPVIKRTDREKALCPTRENFNSQQKNLSVSCAAASVASSRSSVLKDLEYGCLKI 1644
Query: 94 AVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
RC P+ + L+ L I EK+INY F++K++LLQA +H +Y+ N IT YQ
Sbjct: 1645 PPRCMFDHPDADKTLNHL--ISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQ 1702
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ S
Sbjct: 1703 RLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVS 1762
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + F Q Q +N E +G ++ + +++ E +
Sbjct: 1763 PELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDI 1802
Query: 270 DVPKALGDVFEALV 283
+VPKA+GD+FE+L
Sbjct: 1803 EVPKAMGDIFESLA 1816
>gi|296215835|ref|XP_002754306.1| PREDICTED: endoribonuclease Dicer isoform 3 [Callithrix jacchus]
Length = 1922
Score = 148 bits (374), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 159/314 (50%), Gaps = 66/314 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1527 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1584
Query: 72 ALN--ILPQSK-IDVHEAL-----------------------------------YGPHPS 93
+L +LP K D +AL YG
Sbjct: 1585 SLGLKVLPVIKRTDREKALCPTRENFNHQQKNLSVSCAAASVASSRSSVLKDLEYGCLKI 1644
Query: 94 AVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
RC P+ + L+ L I EK+INY F++K++LLQA +H +Y+ N IT YQ
Sbjct: 1645 PPRCMFDHPDADKTLNYL--ISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQ 1702
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ S
Sbjct: 1703 RLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVS 1762
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + F Q Q +N E +G ++ + +++ E +
Sbjct: 1763 PELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDI 1802
Query: 270 DVPKALGDVFEALV 283
+VPKA+GD+FE+L
Sbjct: 1803 EVPKAMGDIFESLA 1816
>gi|167046036|gb|ABZ10549.1| dicer 1 [Nematostella vectensis]
Length = 412
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 93/254 (36%), Positives = 134/254 (52%), Gaps = 40/254 (15%)
Query: 43 DKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LPQSKIDVHEALYGPHPSA-----V 95
DK VAD VE+L G YL +CG +GA+ FL L + LP+S + GP S+
Sbjct: 163 DKSVADSVEALIGAYLTTCGYQGALHFLDWLGVKVLPESPMSTD----GPRASSKYSIFT 218
Query: 96 RCPEQARGLDPL---RYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLE 152
R +P R+ + E RI Y F +K +L+QAL+H +Y+ NR+T YQRLE
Sbjct: 219 RPTITEYNSNPQVLKRFAVQLQGFENRIGYEFSNKLYLIQALTHASYSQNRLTDCYQRLE 278
Query: 153 FLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
FLGDA++DFLVT +Y ++L PGE++D+R A+VNN FA AV+ +K L SP
Sbjct: 279 FLGDALLDFLVTELIYSRNTNLDPGELTDLRQALVNNNIFAEIAVKHGFNKSLFQMSPEW 338
Query: 213 YENVTRF---AQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
+ + F + +EAR +IS + FL D + E +
Sbjct: 339 FNKIGVFVDHVKEREARGIQISKDP---------------FLTLSNDDE--------EGI 375
Query: 270 DVPKALGDVFEALV 283
+ PK LGD+FE++
Sbjct: 376 EAPKVLGDIFESVA 389
>gi|254281220|ref|NP_001123390.2| endoribonuclease Dicer [Xenopus (Silurana) tropicalis]
gi|238064965|sp|B3DLA6.2|DICER_XENTR RecName: Full=Endoribonuclease Dicer
gi|169261418|gb|ACA52289.1| endoribonuclease [Xenopus (Silurana) tropicalis]
Length = 1893
Score = 148 bits (373), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 160/309 (51%), Gaps = 59/309 (19%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1501 FWNPSEENCGADAGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1558
Query: 72 ALN--ILPQSKIDVHE----ALYGPHPSAVR--CPEQAR---------GLDP--LRYIPE 112
+L +LP+ + V + + ++ R C AR G+D L+ P
Sbjct: 1559 SLGLKVLPEVRKLVTNTNVISASSSYQNSTRDNCTLTARTNTDLSSCKGIDYGYLKIPPR 1618
Query: 113 CT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFL 154
C EK+INY F++K++LLQA +H +Y+ N IT YQRLEFL
Sbjct: 1619 CMFEHPDAEKTLDHLISGFENFEKKINYPFKNKAYLLQAFTHASYHYNTITDCYQRLEFL 1678
Query: 155 GDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYE 214
GDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP L+
Sbjct: 1679 GDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAISPELFH 1738
Query: 215 NVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKA 274
+ F Q Q +N E +G ++ + +++ E ++VPKA
Sbjct: 1739 VIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDIEVPKA 1778
Query: 275 LGDVFEALV 283
+GD+FE+L
Sbjct: 1779 MGDIFESLA 1787
>gi|395827764|ref|XP_003787065.1| PREDICTED: endoribonuclease Dicer isoform 1 [Otolemur garnettii]
gi|395827766|ref|XP_003787066.1| PREDICTED: endoribonuclease Dicer isoform 2 [Otolemur garnettii]
Length = 1921
Score = 147 bits (372), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 107/315 (33%), Positives = 159/315 (50%), Gaps = 67/315 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1525 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1582
Query: 72 ALN--ILPQSK-IDVHEAL------------------------------------YGPHP 92
+L +LP K D +A+ YG
Sbjct: 1583 SLGLKVLPVIKRTDREKAMCPTRENFSSQQKNLSVSCAAAAAVASSRSSVLKDLEYGCLK 1642
Query: 93 SAVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSY 148
RC P+ + L+ L I EK+INY F++K++LLQA +H +Y+ N IT Y
Sbjct: 1643 IPPRCMFDHPDADKTLNHL--ISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCY 1700
Query: 149 QRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
QRLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+
Sbjct: 1701 QRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAV 1760
Query: 209 SPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEY 268
SP L+ + F Q Q +N E +G ++ + +++ E
Sbjct: 1761 SPELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEED 1800
Query: 269 VDVPKALGDVFEALV 283
++VPKA+GD+FE+L
Sbjct: 1801 IEVPKAMGDIFESLA 1815
>gi|89114050|gb|ABD61616.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 147 bits (370), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 118/212 (55%), Gaps = 27/212 (12%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI----------------- 75
YN + + + DK +AD VE+L G YL CG GA+LF+ L +
Sbjct: 1833 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQR 1892
Query: 76 LPQSKIDVHE---ALYGPHPSAVR-----CPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
+P S E +YG P++ P LD L + + E+ + Y F+D+
Sbjct: 1893 IPGSTKPNAENVVTVYGAWPTSRSPLLHFAPNATEELDQL--LSGFEEFEESLGYKFRDR 1950
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
NN FAS AVR HK H SP L + + RF
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRF 2042
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1667 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1723
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1724 ANLNLYRLGRRKRLGEYMI 1742
>gi|195023643|ref|XP_001985724.1| GH20958 [Drosophila grimshawi]
gi|193901724|gb|EDW00591.1| GH20958 [Drosophila grimshawi]
Length = 1713
Score = 146 bits (369), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 92/279 (32%), Positives = 154/279 (55%), Gaps = 31/279 (11%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEAL- 87
SS +F + ++K+ +KV+AD +E+L GV +++ G++ L+ I K D+ + L
Sbjct: 1339 SSEVDFCVGQVKMPNKVLADTLEALLGVIIKNYGLQHGFRMLEYFGI---CKPDIGKPLT 1395
Query: 88 ----YGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANR 143
+ +R R +D ++ + LE + YTF+D+++LLQAL+HP+ NR
Sbjct: 1396 QLLDLQLGSTQLRTNITKREVD--EFLINHSALEHNLGYTFRDRAYLLQALTHPSNPTNR 1453
Query: 144 ITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHK 203
+T YQ LEF+GDAI+DFL++AY++E+ + ++PG+++D+RSA+VNN T A VR +H
Sbjct: 1454 LTGCYQELEFVGDAILDFLISAYIFEHKTRMTPGQLTDLRSALVNNTTLACICVRHRIHF 1513
Query: 204 HLLHDSPRLYENVTRFAQNQEARNHEI-------------------SDEEEEEEEEEGIV 244
+L ++ L +++ F + QE +NH + SD+E E E +
Sbjct: 1514 FILAENAMLSDSIQNFVRFQETQNHRVTNQVRILMEESDLMPGPLDSDDELEMAEADEQQ 1573
Query: 245 RCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+ K + Y + VDVPK LGDV EAL+
Sbjct: 1574 ASQPAITADTKKPEVGEYN-ISTNVDVPKTLGDVLEALI 1611
>gi|194225335|ref|XP_001496219.2| PREDICTED: endoribonuclease Dicer [Equus caballus]
Length = 1785
Score = 146 bits (369), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 157/314 (50%), Gaps = 66/314 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1390 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1447
Query: 72 ALN--ILPQSK-IDVHEALYGPHPS---------------------AVRCPEQARGLDPL 107
+L +LP K D + L P + + C + G L
Sbjct: 1448 SLGLKVLPVIKRTDREKGLCPPRENFSSQQKNLSGGWAAASAASSRSSVCKDLEYGC--L 1505
Query: 108 RYIPECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
+ P C EK+INY F++K++LLQA +H +Y+ N IT YQ
Sbjct: 1506 KIPPRCMFDHPDADKTLNHLISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQ 1565
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ S
Sbjct: 1566 RLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVS 1625
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + F Q Q +N E +G ++ + +++ E +
Sbjct: 1626 PELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDI 1665
Query: 270 DVPKALGDVFEALV 283
+VPKA+GD+FE+L
Sbjct: 1666 EVPKAMGDIFESLA 1679
>gi|89114032|gb|ABD61607.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 117/212 (55%), Gaps = 27/212 (12%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNIL---------------- 76
YN + + + DK +AD VE+L G YL CG GA+LF+ L +
Sbjct: 1833 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQR 1892
Query: 77 --------PQSKIDVHEALYGPHPSAVR-CPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
P++ + V+ A P + P LD L + + E+ + Y F+D+
Sbjct: 1893 IPGSTKPNPENVVTVYGAWPTPRSPLLHFAPNATEELDQL--LSGFEEFEESLGYKFRDR 1950
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
NN FAS AVR HK H SP L + + RF
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRF 2042
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1667 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1723
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1724 ANLNLYRLGRRKRLGEYMI 1742
>gi|268576156|ref|XP_002643058.1| C. briggsae CBR-DCR-1 protein [Caenorhabditis briggsae]
Length = 1863
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 138/254 (54%), Gaps = 19/254 (7%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALN---ILPQSKIDVHEALYG 89
YN L + + DK +AD +E+L GV+L + G + + + I DV L
Sbjct: 1514 YNLLTQQNISDKAIADAMEALIGVHLLTLGPNPTLKVMNWMGLKVIQKDQATDVQPPLLR 1573
Query: 90 PHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
+ + + LD L + QLE++I Y F+D+++L+QA +H +Y NR+T YQ
Sbjct: 1574 FIDTPINPDASTKALDNLWQQFQFAQLEEKIGYRFKDRAYLVQAFTHASYINNRVTGCYQ 1633
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDA++D+++T YL+E+ SPG ++D+RSA+VNN FAS AV+ + KH +
Sbjct: 1634 RLEFLGDAVLDYMITRYLFEDVRQYSPGVLTDLRSALVNNTIFASLAVKFEFQKHFIAMC 1693
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + +F + R+ + + E +++ ++ + + VE
Sbjct: 1694 PGLHHMIEKFVKLCGDRSFDTNFNTE-------------MYMVTTEEEIDEGHEEDVE-- 1738
Query: 270 DVPKALGDVFEALV 283
VPKALGDVFE++
Sbjct: 1739 -VPKALGDVFESVA 1751
Score = 39.7 bits (91), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/135 (31%), Positives = 60/135 (44%), Gaps = 20/135 (14%)
Query: 129 FLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
LL AL+ T NA+ S +R E +GD+ + F T YLY G++S RS V+
Sbjct: 1350 LLLTALT--TSNASD-GMSLERFETIGDSFLKFATTDYLYHTLQEQHEGKLSWARSKEVS 1406
Query: 189 NVTFASYAVRLDLHKHLL------HDS--PRLYENVTRFAQNQEARNHEISDEEEEEEEE 240
N +L + + ++ HDS P Y F + SD EE+++E
Sbjct: 1407 NCNLYRLGKKLGIPQLIVANKFDAHDSWLPPCYVPTCDF------KAPNTSDAEEKDKEM 1460
Query: 241 EGIVRCLIFFLIEEK 255
E R L IEEK
Sbjct: 1461 E---RILSGQTIEEK 1472
>gi|89114040|gb|ABD61611.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 117/212 (55%), Gaps = 27/212 (12%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI----------------- 75
YN + + + DK +AD VE+L G YL CG GA+LF+ L +
Sbjct: 1833 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQR 1892
Query: 76 LPQSKIDVHE---ALYGPHPSAVR-----CPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
+P S E +YG P+ P LD L + + E+ + Y F+D+
Sbjct: 1893 IPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQL--LSGFEEFEESLGYKFRDR 1950
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
NN FAS AVR HK H SP L + + RF
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRF 2042
Score = 43.9 bits (102), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1667 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1723
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1724 ANLNLYRLGRRKRLGEYMI 1742
>gi|89114044|gb|ABD61613.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 117/212 (55%), Gaps = 27/212 (12%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI----------------- 75
YN + + + DK +AD VE+L G YL CG GA+LF+ L +
Sbjct: 1833 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEKR 1892
Query: 76 LPQSKIDVHE---ALYGPHPSAVR-----CPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
+P S E +YG P+ P LD L + + E+ + Y F+D+
Sbjct: 1893 IPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQL--LSGFEEFEESLGYKFRDR 1950
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
NN FAS AVR HK H SP L + + RF
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRF 2042
Score = 43.9 bits (102), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1667 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1723
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1724 ANLNLYRLGRRKRLGEYMI 1742
>gi|89114046|gb|ABD61614.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 117/212 (55%), Gaps = 27/212 (12%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI----------------- 75
YN + + + DK +AD VE+L G YL CG GA+LF+ L +
Sbjct: 1833 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQR 1892
Query: 76 LPQSKIDVHE---ALYGPHPSAVR-----CPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
+P S E +YG P+ P LD L + + E+ + Y F+D+
Sbjct: 1893 IPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQL--LSGFEEFEESLGYKFRDR 1950
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
NN FAS AVR HK H SP L + + RF
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRF 2042
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1667 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1723
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1724 ANLNLYRLGRRKRLGEYMI 1742
>gi|89114038|gb|ABD61610.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 117/212 (55%), Gaps = 27/212 (12%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI----------------- 75
YN + + + DK +AD VE+L G YL CG GA+LF+ L +
Sbjct: 1833 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQR 1892
Query: 76 LPQSKIDVHE---ALYGPHPSAVR-----CPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
+P S E +YG P+ P LD L + + E+ + Y F+D+
Sbjct: 1893 IPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQL--LSGFEEFEESLGYKFRDR 1950
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
NN FAS AVR HK H SP L + + RF
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRF 2042
Score = 43.9 bits (102), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1667 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1723
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1724 ANLNLYRLGRRKRLGEYMI 1742
>gi|89114024|gb|ABD61603.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 117/212 (55%), Gaps = 27/212 (12%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI----------------- 75
YN + + + DK +AD VE+L G YL CG GA+LF+ L +
Sbjct: 1833 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQR 1892
Query: 76 LPQSKIDVHE---ALYGPHPSAVR-----CPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
+P S E +YG P+ P LD L + + E+ + Y F+D+
Sbjct: 1893 IPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQL--LSGFEEFEESLGYKFRDR 1950
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
NN FAS AVR HK H SP L + + RF
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRF 2042
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1667 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1723
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1724 ANLNLYRLGRRKRLGEYMI 1742
>gi|89114020|gb|ABD61601.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 117/212 (55%), Gaps = 27/212 (12%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI----------------- 75
YN + + + DK +AD VE+L G YL CG GA+LF+ L +
Sbjct: 1833 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQR 1892
Query: 76 LPQSKIDVHE---ALYGPHPSAVR-----CPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
+P S E +YG P+ P LD L + + E+ + Y F+D+
Sbjct: 1893 IPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQL--LSGFEEFEESLGYKFRDR 1950
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
NN FAS AVR HK H SP L + + RF
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRF 2042
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1667 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1723
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1724 ANLNLYRLGRRKRLGEYMI 1742
>gi|89114048|gb|ABD61615.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 117/212 (55%), Gaps = 27/212 (12%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI----------------- 75
YN + + + DK +AD VE+L G YL CG GA+LF+ L +
Sbjct: 1833 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRHLDGGNQEQR 1892
Query: 76 LPQSKIDVHE---ALYGPHPSAVR-----CPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
+P S E +YG P+ P LD L + + E+ + Y F+D+
Sbjct: 1893 IPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQL--LSGFEEFEESLGYKFRDR 1950
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
NN FAS AVR HK H SP L + + RF
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRF 2042
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1667 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1723
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1724 ANLNLYRLGRRKRLGEYMI 1742
>gi|89114042|gb|ABD61612.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 117/212 (55%), Gaps = 27/212 (12%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI----------------- 75
YN + + + DK +AD VE+L G YL CG GA+LF+ L +
Sbjct: 1833 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQR 1892
Query: 76 LPQSKIDVHE---ALYGPHPSAVR-----CPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
+P S E +YG P+ P LD L + + E+ + Y F+D+
Sbjct: 1893 IPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQL--LSGFEEFEESLGYKFRDR 1950
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
NN FAS AVR HK H SP L + + RF
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRF 2042
Score = 43.9 bits (102), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1667 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1723
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1724 ANLNLYRLGRRKRLGEYMI 1742
>gi|89114022|gb|ABD61602.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 117/212 (55%), Gaps = 27/212 (12%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI----------------- 75
YN + + + DK +AD VE+L G YL CG GA+LF+ L +
Sbjct: 1833 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQR 1892
Query: 76 LPQSKIDVHE---ALYGPHPSAVR-----CPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
+P S E +YG P+ P LD L + + E+ + Y F+D+
Sbjct: 1893 IPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQL--LSGFEEFEESLGYKFRDR 1950
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
NN FAS AVR HK H SP L + + RF
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRF 2042
Score = 43.9 bits (102), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1667 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1723
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1724 ANLNLYRLGRRKRLGEYMI 1742
>gi|89114036|gb|ABD61609.1| Dicer-1 [Drosophila simulans]
Length = 2043
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 117/212 (55%), Gaps = 27/212 (12%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI----------------- 75
YN + + + DK +AD VE+L G YL CG GA+LF+ L +
Sbjct: 1833 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEXR 1892
Query: 76 LPQSKIDVHE---ALYGPHPSAVR-----CPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
+P S E +YG P+ P LD L + + E+ + Y F+D+
Sbjct: 1893 IPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATXELDQL--LSGFEEFEESLGYKFRDR 1950
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
NN FAS AVR HK H SP L + + RF
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRF 2042
Score = 43.9 bits (102), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1667 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1723
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1724 ANLNLYRLGRRKRLGEYMI 1742
>gi|89114030|gb|ABD61606.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 146 bits (368), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 117/212 (55%), Gaps = 27/212 (12%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI----------------- 75
YN + + + DK +AD VE+L G YL CG GA+LF+ L +
Sbjct: 1833 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQR 1892
Query: 76 LPQSKIDVHE---ALYGPHPSAVR-----CPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
+P S E +YG P+ P LD L + + E+ + Y F+D+
Sbjct: 1893 IPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQL--LSGFEEFEESLGYKFRDR 1950
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
NN FAS AVR HK H SP L + + RF
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRF 2042
Score = 43.9 bits (102), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1667 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1723
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1724 ANLNLYRLGRRKRLGEYMI 1742
>gi|89114028|gb|ABD61605.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 117/212 (55%), Gaps = 27/212 (12%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI----------------- 75
YN + + + DK +AD VE+L G YL CG GA+LF+ L +
Sbjct: 1833 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQR 1892
Query: 76 LPQSKIDVHE---ALYGPHPSAVR-----CPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
+P S E +YG P+ P LD L + + E+ + Y F+D+
Sbjct: 1893 IPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQL--LSGFEKFEESLGYKFRDR 1950
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
NN FAS AVR HK H SP L + + RF
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRF 2042
Score = 43.9 bits (102), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1667 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1723
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1724 ANLNLYRLGRRKRLGEYMI 1742
>gi|348554455|ref|XP_003463041.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer-like [Cavia
porcellus]
Length = 1929
Score = 145 bits (367), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 155/314 (49%), Gaps = 66/314 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1534 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1591
Query: 72 ALN--ILPQSKIDVHEAL------------------------------------YGPHPS 93
+L +LP K E YG
Sbjct: 1592 SLGLKVLPVIKRTGREKALCPARENFSSQQKSLSGSCASAAAAGSRSSACKDLEYGCLKI 1651
Query: 94 AVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
RC P+ + L L I EK+INY F++K++LLQA +H +Y+ N IT YQ
Sbjct: 1652 PPRCMFDHPDADKTLTHL--ISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQ 1709
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ S
Sbjct: 1710 RLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVS 1769
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + F Q Q +N E +G ++ + +++ E +
Sbjct: 1770 PELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDI 1809
Query: 270 DVPKALGDVFEALV 283
+VPKA+GD+FE+L
Sbjct: 1810 EVPKAMGDIFESLA 1823
>gi|89114034|gb|ABD61608.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 83/212 (39%), Positives = 117/212 (55%), Gaps = 27/212 (12%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI----------------- 75
YN + + + DK +AD VE+L G YL CG GA+LF+ L +
Sbjct: 1833 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQR 1892
Query: 76 LPQSKIDVHE---ALYGPHPSAVR-----CPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
+P S E +YG P+ P LD L + + E+ + Y F+D+
Sbjct: 1893 IPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDHL--LSGFEEFEESLGYKFRDR 1950
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S+LLQA++H +Y NR+T YQRLEFLGDA++D+L+T +LYE+ SPG ++D+RSA+V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYLITRHLYEDPRQHSPGALTDLRSALV 2010
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
NN FAS AVR HK H SP L + + RF
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRF 2042
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1667 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1723
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1724 ANLNLYRLGRRKRLGEYMI 1742
>gi|89114026|gb|ABD61604.1| Dicer-1 [Drosophila melanogaster]
Length = 2043
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 82/212 (38%), Positives = 117/212 (55%), Gaps = 27/212 (12%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI----------------- 75
YN + + + DK +AD VE+L G YL CG GA+LF+ L +
Sbjct: 1833 YNLVSQHSIPDKSIADCVEALIGAYLIECGPRGALLFMAWLGVRVLPITRQLDGGNQEQR 1892
Query: 76 LPQSKIDVHE---ALYGPHPSAVR-----CPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
+P S E +YG P+ P LD L + + E+ + Y F+D+
Sbjct: 1893 IPGSTKPNAENVVTVYGAWPTPRSPLLHFAPNATEELDQL--LSGFEEFEESLGYKFRDR 1950
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S+LLQA++H +Y NR+T YQRLEFLGDA++D+++T +LYE+ SPG ++D+RSA+V
Sbjct: 1951 SYLLQAMTHASYTPNRLTDCYQRLEFLGDAVLDYIITRHLYEDPRQHSPGALTDLRSALV 2010
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
NN FAS AVR HK H SP L + + RF
Sbjct: 2011 NNTIFASLAVRHGFHKFFRHLSPGLNDVIDRF 2042
Score = 43.9 bits (102), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 45/79 (56%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NAN + +RLE +GD+ + + +T YLY + ++ G++S +RS V
Sbjct: 1667 SIILQALT--MSNAND-GINLERLETIGDSFLKYAITTYLYITYENVHEGKLSHLRSKQV 1723
Query: 188 NNVTFASYAVRLDLHKHLL 206
N+ R L ++++
Sbjct: 1724 ANLNLYRLGRRKRLGEYMI 1742
>gi|321475108|gb|EFX86072.1| hypothetical protein DAPPUDRAFT_309030 [Daphnia pulex]
Length = 1607
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 137/251 (54%), Gaps = 32/251 (12%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFL--QALNILPQSKIDVHEALYG--PHPSA----- 94
K VAD +E+L GVYL + GI+GA+ + L +P+ +I + G PS
Sbjct: 1269 KNVADCMEALIGVYLTTTGIKGAIKLMDWMGLKTVPRLEIATFNEMNGFPILPSTFGSST 1328
Query: 95 ---VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRL 151
+ +Q L L EKR+ YTF++K+ L++AL+H +Y NRIT YQRL
Sbjct: 1329 LNDTQLKDQEEALSQL--FAGLESFEKRLRYTFKNKALLIEALTHASYIPNRITNCYQRL 1386
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPR 211
EFLGDA++D+LVT Y Y+N +P ++D+RSAMVNN TFA AV+ H +L H S
Sbjct: 1387 EFLGDAVLDYLVTRYYYDNPCQYTPAILTDLRSAMVNNETFAVMAVQNRFHLYLKHLSLS 1446
Query: 212 LYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDV 271
L + RF ++QE H + +F++EE ++ + + +DV
Sbjct: 1447 LNVILDRFVRSQEENGHLLMHN---------------YFVLEE---TSEPHQSLASNIDV 1488
Query: 272 PKALGDVFEAL 282
PK LGD+FE++
Sbjct: 1489 PKVLGDIFESV 1499
>gi|301770225|ref|XP_002920522.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer-like
[Ailuropoda melanoleuca]
Length = 1931
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 107/320 (33%), Positives = 155/320 (48%), Gaps = 70/320 (21%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1528 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1585
Query: 72 ALN--ILPQSKIDVHEALYGP----------HPSAVRCPEQARG----------LDPLRY 109
+L +LP K E P + S R P A G L+
Sbjct: 1586 SLGLKVLPVIKRTDREKAVCPARENFSSQQKNLSGSRAPASAAGSRSSVLKDLEYGCLKI 1645
Query: 110 IPECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRL 151
P C EK+INY F++K++LLQA +H +Y+ N IT YQRL
Sbjct: 1646 PPRCMFDHPDADKTLNHLISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRL 1705
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAV--------RLDLHK 203
EFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV D HK
Sbjct: 1706 EFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVXXXXXXXXXXDYHK 1765
Query: 204 HLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYG 263
+ SP L+ + F Q Q +N E +G ++ + +++
Sbjct: 1766 YFKAVSPELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDE 1805
Query: 264 RVVEYVDVPKALGDVFEALV 283
E ++VPKA+GD+FE+L
Sbjct: 1806 EKEEDIEVPKAMGDIFESLA 1825
>gi|443725259|gb|ELU12939.1| hypothetical protein CAPTEDRAFT_223153 [Capitella teleta]
Length = 1651
Score = 144 bits (364), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/263 (34%), Positives = 142/263 (53%), Gaps = 34/263 (12%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ--ALNILPQSKIDVHEALYGP 90
YN + L DK +AD VE+L G YL +CG A+ F+ L +LP K L
Sbjct: 1295 YNLQTQHSLPDKSIADGVEALIGCYLVTCGQRAALQFMSWLGLRVLPNVKPADKNNLAM- 1353
Query: 91 HPSAVRCPEQ---------ARGLDPLRYIPEC-TQLEKRINYTFQDKSFLLQALSHPTYN 140
S C + D L+++ + + E++I Y F+D+S+LLQA +H +Y+
Sbjct: 1354 --SGFSCLPPPPSPLLTHVSNSEDVLKHLLDGYEEFEEKICYKFRDRSYLLQAFTHASYH 1411
Query: 141 ANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLD 200
N +T YQRLEFLGDAI+D+++T +L+E+ SPG ++D+RSA+VNN FA+ AV+ +
Sbjct: 1412 YNTVTDCYQRLEFLGDAILDYVITRHLFEDSEKHSPGVLTDLRSALVNNNIFAALAVKWN 1471
Query: 201 LHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTD 260
HK+ SP+L+ + +F Q+ RN EI+ L EE +
Sbjct: 1472 FHKYFRAISPQLFYVIDKFVTWQKDRNDEIN-------------------LDEEFGELEE 1512
Query: 261 VYGRVVEYVDVPKALGDVFEALV 283
E +++PKALGD+FE++
Sbjct: 1513 DGEGTEEDIEIPKALGDIFESVA 1535
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%), Gaps = 3/70 (4%)
Query: 120 INYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEI 179
+N+ +LQ L+ NAN + +RLE +GD+ + F +T YLY + + G++
Sbjct: 1124 VNFIGPSPCLILQTLT--MSNANDFF-NLERLETIGDSFLKFAITVYLYCEYPGIHEGKL 1180
Query: 180 SDIRSAMVNN 189
S +RS V+N
Sbjct: 1181 SYLRSKQVSN 1190
>gi|392895692|ref|NP_498761.2| Protein DCR-1 [Caenorhabditis elegans]
gi|408360292|sp|P34529.3|DCR1_CAEEL RecName: Full=Endoribonuclease dcr-1
gi|379657006|emb|CCD71200.2| Protein DCR-1 [Caenorhabditis elegans]
Length = 1910
Score = 144 bits (363), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 84/254 (33%), Positives = 137/254 (53%), Gaps = 19/254 (7%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALN---ILPQSKIDVHEALYG 89
YN L + + DK +AD VE+L GV+L + G + + + I K DV L
Sbjct: 1560 YNLLTQQHISDKSIADAVEALIGVHLLTLGPNPTLKVMNWMGLKVIQKDQKSDVPSPLLR 1619
Query: 90 PHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
+ L+ L + TQLE++I Y F+++++L+QA +H +Y NR+T YQ
Sbjct: 1620 FIDTPTNPNASLNFLNNLWQQFQFTQLEEKIGYRFKERAYLVQAFTHASYINNRVTGCYQ 1679
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDA++D+++T YL+E+ SPG ++D+RSA+VNN FAS AV+ + KH +
Sbjct: 1680 RLEFLGDAVLDYMITRYLFEDSRQYSPGVLTDLRSALVNNTIFASLAVKFEFQKHFIAMC 1739
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P LY + +F + RN + + E +++ ++ + +E
Sbjct: 1740 PGLYHMIEKFVKLCSERNFDTNFNAE-------------MYMVTTEEEIDEGQEEDIE-- 1784
Query: 270 DVPKALGDVFEALV 283
VPKA+GD+FE++
Sbjct: 1785 -VPKAMGDIFESVA 1797
>gi|307133775|ref|NP_001182502.1| endoribonuclease Dicer isoform 2 [Homo sapiens]
gi|300517087|gb|ADK25182.1| t-Dicer [Homo sapiens]
Length = 1829
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/258 (37%), Positives = 135/258 (52%), Gaps = 46/258 (17%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1527 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1584
Query: 72 ALN--ILPQSK-IDVHEAL-----------------------------------YGPHPS 93
+L +LP K D +AL YG
Sbjct: 1585 SLGLKVLPVIKRTDREKALCPTRENFNSQQKNLSVSCAAASVASSRSSVLKDSEYGCLKI 1644
Query: 94 AVRC----PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
RC P+ + L+ L I EK+INY F++K++LLQA +H +Y+ N IT YQ
Sbjct: 1645 PPRCMFDHPDADKTLNHL--ISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQ 1702
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ S
Sbjct: 1703 RLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVS 1762
Query: 210 PRLYENVTRFAQNQEARN 227
P L+ + F Q Q +N
Sbjct: 1763 PELFHVIDDFVQFQLEKN 1780
>gi|391341486|ref|XP_003745061.1| PREDICTED: endoribonuclease Dicer [Metaseiulus occidentalis]
Length = 1863
Score = 144 bits (363), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 96/271 (35%), Positives = 148/271 (54%), Gaps = 30/271 (11%)
Query: 17 EDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ--ALN 74
+DG+ E +P Y+ L + DK +AD +E+L G YL SCG + + L
Sbjct: 1477 KDGEASGEGEFVP---YSLLTHHSIPDKSIADCLEALIGAYLVSCGRCNTLKCMTWFGLR 1533
Query: 75 ILP-QSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQA 133
+LP + D +L+ P + R L L + E+RI Y F++K FLLQA
Sbjct: 1534 VLPLDCEGDAFASLFKKIPPPLPASYDERVLRQLLH--GHVSFEERIGYKFKNKGFLLQA 1591
Query: 134 LSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYEN-FSHLSPGEISDIRSAMVNNVTF 192
+H +Y+ N +T YQRLEFLGDA++D+L+T YLYE+ SPG ++D+RSA+VNN F
Sbjct: 1592 FTHASYHYNTLTDCYQRLEFLGDAVLDYLITRYLYEDPVKQHSPGALTDLRSALVNNTFF 1651
Query: 193 ASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLI 252
A+ AV+ + HK+ L+ SPRL++ + RF ++ +S ++ +F
Sbjct: 1652 AALAVKYEFHKYFLNLSPRLFKLIHRFVSTKK----HLSGKQ--------------YF-- 1691
Query: 253 EEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
EK + E ++VPKALGD+FE++
Sbjct: 1692 -EKYYLGEDECEEAEEIEVPKALGDIFESVA 1721
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 3/65 (4%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
+ LLQAL+ NAN + +RLE +GD+ + + +T YLY + + G++S +RS +
Sbjct: 1361 AILLQALT--MSNAND-GINLERLETVGDSFLKYAITNYLYCTYLGVHEGKLSFLRSKQI 1417
Query: 188 NNVTF 192
+NV
Sbjct: 1418 SNVNL 1422
>gi|340372191|ref|XP_003384628.1| PREDICTED: endoribonuclease Dicer-like [Amphimedon queenslandica]
Length = 1530
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 88/269 (32%), Positives = 148/269 (55%), Gaps = 30/269 (11%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNIL----------PQSK--------I 81
K+ DK VAD VE+L G + + G+EG + ++ I P+S +
Sbjct: 1210 KVTDKSVADTVEALIGAHTVAGGLEGGITLMKWFGIKINDGSSTIAPPKSTSSNTRSLLL 1269
Query: 82 DVHEALYGPHPSAVRCPEQARGLDPL----RYIPECTQLEKRINYTFQDKSFLLQALSHP 137
++++ H + P+ A + R +P+ + ++ +I Y+F+++ L++A++H
Sbjct: 1270 AESDSIFSSHFGSPPAPKLAFSDKAISTRNRILPQVSSIQGKIEYSFKNELLLIEAMTHS 1329
Query: 138 TYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAV 197
+Y+ N IT YQRLEFLGDAI+D+LVT ++Y++ S PGEI+++RSA+V N FA A+
Sbjct: 1330 SYHRNDITGCYQRLEFLGDAILDYLVTCHIYQSDSSAEPGEITELRSALVCNSRFAKLAI 1389
Query: 198 RLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEE---EEEEEEEGIVRCLIFFLIEE 254
L+LHK L H SP L+ ++ ++AQ+ R E EE + + + IV I++
Sbjct: 1390 SLNLHKSLCHGSPNLFNDMKKYAQSLRQREKEDMFEEMSINDNDSAQAIVES-----IKD 1444
Query: 255 KDVQTDVYGRVVEYVDVPKALGDVFEALV 283
D D + ++ PK+L D FEAL
Sbjct: 1445 GDFDDDDDDDDDDDIEPPKSLSDCFEALA 1473
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 40/83 (48%), Gaps = 3/83 (3%)
Query: 126 DKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSA 185
D +LQAL+ N + + +RLE LGD+ + + + YLY + G++S+ RS
Sbjct: 1103 DNCLILQALTPRGAND---SINLERLELLGDSFLKLVTSVYLYNLRPNSHEGKLSEARSR 1159
Query: 186 MVNNVTFASYAVRLDLHKHLLHD 208
V N+ + + +L D
Sbjct: 1160 RVANINLFVLGKKKGITSAILSD 1182
>gi|308485595|ref|XP_003104996.1| CRE-DCR-1 protein [Caenorhabditis remanei]
gi|308257317|gb|EFP01270.1| CRE-DCR-1 protein [Caenorhabditis remanei]
Length = 1941
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/254 (32%), Positives = 138/254 (54%), Gaps = 19/254 (7%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALN---ILPQSKIDVHEALYG 89
YN L + + DK +AD +E+L GV+L + G + + + I +K +V L
Sbjct: 1591 YNLLTQQNISDKSIADAMEALIGVHLLTLGPNPTLKVMSWMGLKVIQKDAKTEVAHPLLR 1650
Query: 90 PHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
+ + L+ L + LE+RI Y F+++++L+QA +H +Y NR+T YQ
Sbjct: 1651 FIDTPANPDASLKALNNLWQQYQFANLEERIGYRFKERAYLVQAFTHASYINNRVTGCYQ 1710
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDA++D+++T YL+E+ SPG ++D+RSA+VNN FAS AV+ + KH +
Sbjct: 1711 RLEFLGDAVLDYMITRYLFEDVRQYSPGVLTDLRSALVNNTIFASLAVKFEFQKHFIAMC 1770
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L+ + +F + RN + + E +++ ++ + + VE
Sbjct: 1771 PGLHHMIEKFVKLCADRNFDTNFNAE-------------MYMVTTEEEIDEGHEEDVE-- 1815
Query: 270 DVPKALGDVFEALV 283
VPKALGDVFE++
Sbjct: 1816 -VPKALGDVFESVA 1828
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 61/135 (45%), Gaps = 20/135 (14%)
Query: 129 FLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
LL AL+ T NA S +R E +GD+ + F T YLY G++S RS V+
Sbjct: 1427 LLLTALT--TSNAAD-GMSLERFETIGDSFLKFATTDYLYHTLQDQHEGKLSFARSKEVS 1483
Query: 189 NVTFASYAVRLDL------HKHLLHDS--PRLYENVTRFAQNQEARNHEISDEEEEEEEE 240
N +L + +K HDS P Y F +A N+ SD EE+++E
Sbjct: 1484 NCNLYRLGKKLGIPQLIVANKFDAHDSWLPPCYVPTCDF----KAPNN--SDAEEKDKE- 1536
Query: 241 EGIVRCLIFFLIEEK 255
I R L IEEK
Sbjct: 1537 --IERILNGQTIEEK 1549
>gi|340386816|ref|XP_003391904.1| PREDICTED: endoribonuclease Dicer-like, partial [Amphimedon
queenslandica]
Length = 380
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 152/287 (52%), Gaps = 60/287 (20%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNIL----------PQS-KIDVH---- 84
K+ DK VAD VE+L G + + G+EG + ++ I P+S + H
Sbjct: 20 KVTDKSVADTVEALIGAHTVAGGLEGGITLMKWFGIKINDGSSTIAPPKSTSSNTHSLLL 79
Query: 85 ---EALYGPHPSAVRCPEQARGLDPL--------RYIPECTQLEKRINYTFQDKSFLLQA 133
++++ H + P+ A L PL R +P+ + ++ +I Y+F+++ L++A
Sbjct: 80 AESDSIFSSHFRSPPAPKLASKLAPLDKAISTRNRILPQVSSIQGKIEYSFKNELLLIEA 139
Query: 134 LSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFA 193
++H +Y+ N IT YQRLEFLGDAI+D+LVT ++Y++ S PG ++++RSA+V N FA
Sbjct: 140 MTHSSYHRNDITGCYQRLEFLGDAILDYLVTCHIYQSDSSAEPGRMTELRSALVCNSRFA 199
Query: 194 SYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIE 253
A+ L+LH+ L H SP L+ ++ ++AQ+ + R E+E+ E + +E
Sbjct: 200 ELAISLNLHRSLCHGSPNLFNDMKKYAQSLKQR------EKEDRERK-----------LE 242
Query: 254 EKDVQTDVYGRVV-----------------EYVDVPKALGDVFEALV 283
E + D +V+ + ++ PK+L D FEAL
Sbjct: 243 EMSINDDDSAQVIVESMEDGDIDDDEDEDDDIIEPPKSLSDCFEALA 289
>gi|341893002|gb|EGT48937.1| CBN-DCR-1 protein [Caenorhabditis brenneri]
Length = 1927
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 83/255 (32%), Positives = 139/255 (54%), Gaps = 21/255 (8%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHP 92
YN L + + DK +AD +E+L GV+L + G + + + + K D + P
Sbjct: 1576 YNLLTQQNISDKSIADAMEALIGVHLLTLGPNPTLKVMSWMGLKVIQK-DAVTDVAAPLL 1634
Query: 93 SAVRCPEQARG----LDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSY 148
+ P LD L + +LE++I Y F+++++L+QA +H +Y+ NR+T Y
Sbjct: 1635 RFIDTPTNPNASTIQLDNLWQQFQFAKLEEKIGYRFKERAYLVQAFTHASYSNNRVTGCY 1694
Query: 149 QRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
QRLEFLGDA++D+++T +L+E+ SPG ++D+RSA+VNN FAS AV+ + KH +
Sbjct: 1695 QRLEFLGDAVLDYMITRFLFEDVRQYSPGVLTDLRSALVNNTIFASLAVKYEFQKHFIAM 1754
Query: 209 SPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEY 268
P L+ + +F Q RN + + E +++ ++ + + VE
Sbjct: 1755 CPGLHHMIEKFVQLCADRNFDTNFNAE-------------MYMVTTEEEIDEGHEEDVE- 1800
Query: 269 VDVPKALGDVFEALV 283
VPKALGDVFE++
Sbjct: 1801 --VPKALGDVFESVA 1813
>gi|19072784|gb|AAL84637.1|AF484523_1 endoribonuclease Dicer [Mus musculus]
Length = 361
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/276 (35%), Positives = 140/276 (50%), Gaps = 60/276 (21%)
Query: 47 ADVVESLTGVYLRSCGIEGAMLFLQALN--ILPQSKIDVHE---------------ALYG 89
AD VE+L G YL SCG A LFL +L +LP K E +L G
Sbjct: 1 ADCVEALLGCYLTSCGERAAQLFLCSLGLKVLPVIKRTSREKALDPAQENGSSQQKSLSG 60
Query: 90 PHPSAVRCPEQARGLD----PLRYIPECT------------------QLEKRINYTFQDK 127
S V P + G D L+ P C EK+INY F++K
Sbjct: 61 SCASPVG-PRSSAGKDLEYGCLKIPPRCMFDHPDAEKTLNHLISGFETFEKKINYRFKNK 119
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
++LLQA +H +Y+ N IT YQRLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+V
Sbjct: 120 AYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALV 179
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCL 247
NN FAS AV+ D HK+ SP L+ + F + Q +N E +G
Sbjct: 180 NNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVKFQLEKN-----------EMQG----- 223
Query: 248 IFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
++ + +++ E ++VPKA+GD+FE+L
Sbjct: 224 ----MDSELRRSEEDEEKEEDIEVPKAMGDIFESLA 255
>gi|313236326|emb|CBY11646.1| unnamed protein product [Oikopleura dioica]
Length = 1519
Score = 141 bits (355), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 90/267 (33%), Positives = 146/267 (54%), Gaps = 27/267 (10%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFL--QALNILPQSKIDVHEALYGP 90
YN L DK +AD +E+L G YL++ GIE FL L +LP S + P
Sbjct: 1154 YNHYSDQYLTDKSIADCMEALIGAYLKATGIEATQQFLCYMGLIVLPSSSCEPETGKPLP 1213
Query: 91 ---------HPSAVRCPEQARGLDPLRYIPECT----QLEKRINYTFQDKSFLLQALSHP 137
P ++ Q + L+ + + T + EK+I YTF++K +LLQ+L+H
Sbjct: 1214 PFLLLAPPIEPFHLKSCTQLEKMQRLQALDKLTRTYGEFEKKIGYTFKNKGYLLQSLTHA 1273
Query: 138 TYNANRITTSYQRLEFLGDAIIDFLVTAYLYEN-FSHLSPGEISDIRSAMVNNVTFASYA 196
+Y N++T YQRLEFLGDA++DFL+T +L+++ SPGE++D+R+A+VNN FA+ A
Sbjct: 1274 SYQYNQVTNCYQRLEFLGDAVLDFLITRHLFDHPTKRFSPGELTDLRAALVNNNIFAALA 1333
Query: 197 VRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKD 256
V+ D HK+L +P L+ + + + R ++ EG+ L +EE+
Sbjct: 1334 VKFDFHKYLYALTPDLHNVIRDYVLYCQTR-----------QDVEGMEAVLKRIRLEEEP 1382
Query: 257 VQTDVYGRVVEYVDVPKALGDVFEALV 283
+ + E ++VPK LGD++E++
Sbjct: 1383 EEEEGDHEDSEDIEVPKVLGDIYESVA 1409
Score = 40.4 bits (93), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 28/53 (52%)
Query: 149 QRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
+RLE LGD + + VT YLY + H G++S RS V+N V D+
Sbjct: 1065 ERLEMLGDCFLKYSVTVYLYCKYEHQHEGQLSFFRSKKVSNRNLFRLGVYNDI 1117
>gi|80979103|gb|ABB54754.1| Dicer-2 [Drosophila simulans]
Length = 1537
Score = 139 bits (349), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 78/195 (40%), Positives = 124/195 (63%), Gaps = 7/195 (3%)
Query: 30 SSSYNF-LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID--VHEA 86
SS NF + + + +KV+AD +E+L GV +++ G++ A L+ I +S ID + E
Sbjct: 1344 SSEVNFCVGLVAIANKVIADTLEALLGVIVKNYGLQHAFKMLEYFKIC-RSDIDKPLTEL 1402
Query: 87 LYGPHPSA-VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRIT 145
L S +R +D ++ + LE + YTF+D+ +LLQAL+HP+Y NRIT
Sbjct: 1403 LNLELGSKNIRANVNTTEIDG--FLINHSHLEHNLGYTFKDRRYLLQALTHPSYPTNRIT 1460
Query: 146 TSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
SYQ LEF+GDAI+DFL++AY++EN + ++PG ++D+RSA+VNN T A VR LH +
Sbjct: 1461 GSYQELEFIGDAILDFLISAYIFENNTKMNPGALTDLRSALVNNTTLACICVRHRLHFFI 1520
Query: 206 LHDSPRLYENVTRFA 220
L ++ +L E +++F
Sbjct: 1521 LAENEKLSETISKFV 1535
>gi|281339672|gb|EFB15256.1| hypothetical protein PANDA_009266 [Ailuropoda melanoleuca]
Length = 1917
Score = 137 bits (346), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 103/312 (33%), Positives = 151/312 (48%), Gaps = 69/312 (22%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
+ +P+E+ V + ++ S SY+ + DK +AD VE+L G YL SCG A LFL
Sbjct: 1529 FWNPSEENCGVDTGKQ--SISYDLHTEQCIADKSIADCVEALLGCYLTSCGERAAQLFLC 1586
Query: 72 ALN--ILPQSKIDVHEALYGP----------HPSAVRCPEQARG----------LDPLRY 109
+L +LP K E P + S R P A G L+
Sbjct: 1587 SLGLKVLPVIKRTDREKAVCPARENFSSQQKNLSGSRAPASAAGSRSSVLKDLEYGCLKI 1646
Query: 110 IPECT------------------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRL 151
P C EK+INY F++K++LLQA +H +Y+ N IT YQRL
Sbjct: 1647 PPRCMFDHPDADKTLNHLISGFENFEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRL 1706
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPR 211
EFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS A + SP
Sbjct: 1707 EFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLA-------YFKAVSPE 1759
Query: 212 LYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDV 271
L+ + F Q Q +N E +G ++ + +++ E ++V
Sbjct: 1760 LFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDIEV 1799
Query: 272 PKALGDVFEALV 283
PKA+GD+FE+L
Sbjct: 1800 PKAMGDIFESLA 1811
>gi|189908862|gb|ACE60552.1| dicer-like protein 2 [Brassica rapa]
Length = 1392
Score = 137 bits (344), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 76/181 (41%), Positives = 111/181 (61%), Gaps = 15/181 (8%)
Query: 38 RIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRC 97
R+ L K VADVVE+L G YL G A+ F+ + I K+D + PS
Sbjct: 1088 RMNLKRKSVADVVEALIGAYLSEGGELAALTFMNWVGI----KVDFTTTMIQREPSI--- 1140
Query: 98 PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
QA L +RY +E +NY F+DKS L++AL+H +Y I YQRLEFLGD+
Sbjct: 1141 --QAEKLVNVRY------MESLLNYKFKDKSLLVEALTHGSYMIPEIPRCYQRLEFLGDS 1192
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
++D+L+T +LY + +LSPG ++D+RSA VNN +A AV+ +LHKH+LH S L+++++
Sbjct: 1193 VLDYLITKHLYGEYPNLSPGLLTDMRSASVNNECYAQVAVKSNLHKHVLHASHDLHKHIS 1252
Query: 218 R 218
R
Sbjct: 1253 R 1253
>gi|324500060|gb|ADY40039.1| Endoribonuclease dcr-1 [Ascaris suum]
gi|333440972|gb|AEF32761.1| DCR-1 [Ascaris suum]
Length = 1970
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/263 (31%), Positives = 143/263 (54%), Gaps = 26/263 (9%)
Query: 26 EKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ--ALNILPQSKIDV 83
E++ YN L + LGDK +AD VE+L G +L G + F++ L +L +
Sbjct: 1615 EEISPLPYNMLTQQYLGDKSIADAVEALIGAHLLELGPTATLKFMKWVGLKVLTEPV--- 1671
Query: 84 HEALYGPHPSAVRCPEQAR----GLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY 139
L P + P++ L+ + ++LE I Y F+D+++LLQA +H +Y
Sbjct: 1672 --TLDPPLLRFIDTPQEPELAICKLNEFWVQFQFSKLEDSICYRFKDRAYLLQAFTHASY 1729
Query: 140 NANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRL 199
NRIT YQRLEFLGDA++D+++T +L+++ SPG ++D+RSA+VNN FAS AV+
Sbjct: 1730 YKNRITGCYQRLEFLGDAVLDYVITRFLFQHPRQYSPGVLTDLRSALVNNTIFASLAVKY 1789
Query: 200 DLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQT 259
+ HKH + P L+ + +F + +N ++ E +++ +
Sbjct: 1790 NFHKHFVAMCPGLHHMIEKFVRLCAEKNFSGANFNAE------------MYMVT---TEE 1834
Query: 260 DVYGRVVEYVDVPKALGDVFEAL 282
++ E ++VPKA+GD+FE++
Sbjct: 1835 EIDEGEEEDIEVPKAMGDIFESV 1857
>gi|255547506|ref|XP_002514810.1| ATP binding protein, putative [Ricinus communis]
gi|223545861|gb|EEF47364.1| ATP binding protein, putative [Ricinus communis]
Length = 1388
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 86/245 (35%), Positives = 127/245 (51%), Gaps = 46/245 (18%)
Query: 38 RIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRC 97
R KL +K++ADVVE+L G YL + G +LFL + I K D Y
Sbjct: 1083 RRKLKEKMIADVVEALIGAYLSTGGEIAGLLFLDWIGI----KADFLNMPY--------- 1129
Query: 98 PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
E+ ++P +Y+ C LE + Y+F+D L++AL+H +Y I YQRLEFLGD+
Sbjct: 1130 -ERGFEMNPEKYVNIC-HLESLLKYSFRDPCLLVEALTHGSYMLPEIPRCYQRLEFLGDS 1187
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
++D+L+T +LYE + +SPG ++D+RSA VNN +A AVR LHK++LH S +L++++
Sbjct: 1188 VLDYLITVHLYEKYPGMSPGLLTDMRSASVNNDCYAQSAVREGLHKYILHASQKLHKDIV 1247
Query: 218 RFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGD 277
N + E S E E E + PK LGD
Sbjct: 1248 STVANCK----EFSSESTFGWESE---------------------------ISFPKVLGD 1276
Query: 278 VFEAL 282
V E+L
Sbjct: 1277 VIESL 1281
>gi|224109196|ref|XP_002315119.1| dicer-like protein [Populus trichocarpa]
gi|222864159|gb|EEF01290.1| dicer-like protein [Populus trichocarpa]
Length = 1408
Score = 135 bits (340), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 98/284 (34%), Positives = 142/284 (50%), Gaps = 50/284 (17%)
Query: 3 FLSNLDFD--LYQDPTED-GKKVSSPEKLPSSSYNFL-DRIKLGDKVVADVVESLTGVYL 58
F+ N FD L+ P + G + S E L ++ R K+ K VADVVE+L G YL
Sbjct: 1056 FIRNESFDPKLWMIPGDKCGSDLLSEEPLSECRKIYVRGRRKVKSKTVADVVEALIGAYL 1115
Query: 59 RSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEK 118
+ G A+ F+ + I K+D Y H QA +RY LE
Sbjct: 1116 STGGEVLALFFMDWIGI----KVDFMIVPYERHFQL-----QAEKFVNVRY------LES 1160
Query: 119 RINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGE 178
+NY+F+D S L++AL+H +Y I + YQRLEFLGDA++D+L+T +LY+ + +SPG
Sbjct: 1161 LLNYSFRDPSLLVEALTHGSYMLPEIPSCYQRLEFLGDAVLDYLITMHLYKEYPGMSPGL 1220
Query: 179 ISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEE 238
++D+RSA VNN +A AV+ DLHKH+LH S L++++ A+
Sbjct: 1221 LTDLRSASVNNDCYAQSAVKGDLHKHILHTSQDLHKHIVETAE----------------- 1263
Query: 239 EEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEAL 282
I +K +G E PK LGDV E+L
Sbjct: 1264 -------------IFQKSSLGSTFGWESE-TSFPKVLGDVIESL 1293
>gi|260831340|ref|XP_002610617.1| hypothetical protein BRAFLDRAFT_202604 [Branchiostoma floridae]
gi|229295984|gb|EEN66627.1| hypothetical protein BRAFLDRAFT_202604 [Branchiostoma floridae]
Length = 1760
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 94/286 (32%), Positives = 141/286 (49%), Gaps = 63/286 (22%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI----LPQ--------------SKID 82
+ DK +AD VE+L G YL +CG A LFL L + L Q S +D
Sbjct: 1394 IADKSIADCVEALLGCYLTTCGPRAAQLFLCWLGVKVSYLDQFDFAEPDTDPFDDLSGLD 1453
Query: 83 VHEALYGPHPSAV---------RCPEQARGLDPLR----------------YIPECTQLE 117
+ +PS V C E+ + P + + Q E
Sbjct: 1454 SSYEDWDQNPSTVCDLETFMKVSCAEEYGYIAPPKPPLFHHVGHAQDKLSHMLSGYQQFE 1513
Query: 118 KRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPG 177
+ + Y+F DK+++LQA +HP+Y+ N IT YQRLEFLGDA++D+L+T +L+++ SPG
Sbjct: 1514 ETVQYSFNDKAYMLQAFTHPSYHYNTITDCYQRLEFLGDAVLDYLITNHLFKDPQQHSPG 1573
Query: 178 EISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEE 237
++D+RSA+VNN FAS AV+ D HK+L SP L+ ++ F Q Q+ + E
Sbjct: 1574 ALTDLRSALVNNTIFASLAVKYDYHKYLKFVSPELFNIISNFVQFQQEQGEEQG------ 1627
Query: 238 EEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
++ + D E ++VPKALGDVFE++
Sbjct: 1628 --------------MDSQTYINDEGEEESEDIEVPKALGDVFESVA 1659
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S +LQAL+ NA + +RLE +GD+ + +T +LY +S + G++S +RS V
Sbjct: 1231 SLILQALT--LSNAGDFF-NLERLETIGDSFLKHAITTFLYCTYSRVHEGKLSYMRSRQV 1287
Query: 188 NNVTFASYAVRLDLHKHLL 206
+N+ R L ++
Sbjct: 1288 SNLNLYRLGKRKGLASRMV 1306
>gi|256087296|ref|XP_002579808.1| dicer-1 [Schistosoma mansoni]
Length = 2174
Score = 134 bits (338), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/264 (32%), Positives = 130/264 (49%), Gaps = 46/264 (17%)
Query: 43 DKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID----VHEALYG-PHPSAVRC 97
DK +AD VE+L G YL + G A+ +Q I K D A + P + +
Sbjct: 1816 DKSIADCVEALIGCYLTTRGERSALRLMQWFGIDCLHKSDNSQPTARAPWSLPKSNYLDT 1875
Query: 98 PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTS---------- 147
E L+ R + +LE +NYTF+D S L+QA +HP+Y+ R+ ++
Sbjct: 1876 DENRANLNEARLVWRFDELESSLNYTFKDPSLLIQAFTHPSYHQLRVLSTSNNLSDQSNL 1935
Query: 148 --------YQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRL 199
YQRLEFLGDA++D+++T +LYE+ SPG ++D+RSA+VNN FA+ AVR+
Sbjct: 1936 MFSTDLDCYQRLEFLGDAVLDYVITRFLYEDSKQHSPGVLTDLRSALVNNNIFAALAVRI 1995
Query: 200 DLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQT 259
LHK+ SP+L + F + N+ I +
Sbjct: 1996 GLHKYFRASSPQLLHTIDVFVRKSNNANNTI-----------------------PTNTGH 2032
Query: 260 DVYGRVVEYVDVPKALGDVFEALV 283
R+ + V++PKAL D+FE+L
Sbjct: 2033 LTTNRLSDDVEIPKALSDIFESLA 2056
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 130 LLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
+LQAL T + + + +R+E +GD+ + F+VT +LY + G++S +RS +V N
Sbjct: 1637 ILQAL---TMSCSNDFINLERMETIGDSFLKFVVTVHLYLTYPEAHEGKLSHLRSRIVCN 1693
Query: 190 VTFASYAVRLDLHKHLL 206
DL ++
Sbjct: 1694 SNLYRLGKAKDLQNRMI 1710
>gi|391328911|ref|XP_003738926.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
Length = 1347
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/249 (34%), Positives = 136/249 (54%), Gaps = 39/249 (15%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKI---DVHEALYGPHPSAVRCPEQ 100
K+ AD VE+L GVYL CG GA+ +L+ L+I P + D + P P +R ++
Sbjct: 1103 KMCADSVEALIGVYLEKCGPVGALEYLRWLDI-PLGRYNEGDFLDRFELPLPEPLREDKK 1161
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
A D R+ E +++ + Y FQ++ +L+A++H +Y NR+T SY+RLEFLGDA+ID
Sbjct: 1162 A---DVERWRKEILTVQETLGYIFQNELLVLEAITHKSYRYNRLTRSYERLEFLGDAVID 1218
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
+L++ Y+Y S L+PG+++D+R+++V+N TFA+ V LH + H SP L + RF
Sbjct: 1219 YLISKYIYTADSDLNPGQLTDVRASLVSNNTFAAIIVDNKLHTVMQHHSPLLLKLTNRFV 1278
Query: 221 QNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEY------VDVPKA 274
E E E+ I D+ + G E VD+PK
Sbjct: 1279 --------------EYRETEKRI------------DILAHMMGEEDEDLEDLEQVDIPKP 1312
Query: 275 LGDVFEALV 283
LGD+ E+L+
Sbjct: 1313 LGDLMESLM 1321
Score = 37.4 bits (85), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 43/74 (58%), Gaps = 3/74 (4%)
Query: 130 LLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
+L+AL+ P Y + + + +RLE +GD+ + VT + Y+ + GE++ R +++N
Sbjct: 987 ILKALT-PLYITDIVDS--ERLEVIGDSFLKIAVTLHFYQELISSNEGELTTRRCRIISN 1043
Query: 190 VTFASYAVRLDLHK 203
++ +AV +H+
Sbjct: 1044 MSLLQHAVPKGIHE 1057
>gi|297832974|ref|XP_002884369.1| hypothetical protein ARALYDRAFT_317213 [Arabidopsis lyrata subsp.
lyrata]
gi|297330209|gb|EFH60628.1| hypothetical protein ARALYDRAFT_317213 [Arabidopsis lyrata subsp.
lyrata]
Length = 2033
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/246 (35%), Positives = 128/246 (52%), Gaps = 46/246 (18%)
Query: 37 DRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVR 96
R L K VADVVESL G YL G A++F+ + I K+D +
Sbjct: 1733 SRRNLKRKSVADVVESLIGAYLSEGGELSALMFMNWVGI----KVD-----FTTTKIERE 1783
Query: 97 CPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGD 156
P QA L + Y +E +NY+F+DKS L++AL+H +Y I YQRLEFLGD
Sbjct: 1784 SPIQAEKLVNVGY------MESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGD 1837
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENV 216
+++D+L+T +LY+ + LSPG ++D+RSA VNN +A AV+ +LHKH+LH S L++++
Sbjct: 1838 SVLDYLITKHLYDKYPCLSPGLLTDMRSASVNNECYALVAVKENLHKHILHASHVLHKHI 1897
Query: 217 TRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALG 276
+R +S+ E+ + C I F PK LG
Sbjct: 1898 SR----------TVSEFEQSSLQSTFGWECDISF---------------------PKVLG 1926
Query: 277 DVFEAL 282
DV E+L
Sbjct: 1927 DVIESL 1932
>gi|350855011|emb|CAZ36047.2| dicer-1, putative [Schistosoma mansoni]
Length = 2319
Score = 132 bits (331), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 88/278 (31%), Positives = 138/278 (49%), Gaps = 37/278 (13%)
Query: 43 DKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID----VHEALYG-PHPSAVRC 97
DK +AD VE+L G YL + G A+ +Q I K D A + P + +
Sbjct: 1924 DKSIADCVEALIGCYLTTRGERSALRLMQWFGIDCLHKSDNSQPTARAPWSLPKSNYLDT 1983
Query: 98 PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTS---------- 147
E L+ R + +LE +NYTF+D S L+QA +HP+Y+ R+ ++
Sbjct: 1984 DENRANLNEARLVWRFDELESSLNYTFKDPSLLIQAFTHPSYHQLRVLSTSNNLSDQSNL 2043
Query: 148 --------YQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRL 199
YQRLEFLGDA++D+++T +LYE+ SPG ++D+RSA+VNN FA+ AVR+
Sbjct: 2044 MFSTDLDCYQRLEFLGDAVLDYVITRFLYEDSKQHSPGVLTDLRSALVNNNIFAALAVRI 2103
Query: 200 DLHKHLLHDSPRLYENVTRFAQNQEARNHE----ISDEEEEEEEEEGIVRCLIFFLIEEK 255
LHK+ SP+L + F + Q+ + I++E E + + K
Sbjct: 2104 GLHKYFRASSPQLLHTIDVFVRYQKDVAKDDLDFITNESENQSSKPQHQTYEQHLSKSGK 2163
Query: 256 DVQTD----------VYGRVVEYVDVPKALGDVFEALV 283
+ R+ + V++PKAL D+FE+L
Sbjct: 2164 SNNANNTIPTNTGHLTTNRLSDDVEIPKALSDIFESLA 2201
Score = 38.5 bits (88), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 130 LLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
+LQAL T + + + +R+E +GD+ + F+VT +LY + G++S +RS +V N
Sbjct: 1751 ILQAL---TMSCSNDFINLERMETIGDSFLKFVVTVHLYLTYPEAHEGKLSHLRSRIVCN 1807
Query: 190 VTFASYAVRLDLHKHLL 206
DL ++
Sbjct: 1808 SNLYRLGKAKDLQNRMI 1824
>gi|340373457|ref|XP_003385258.1| PREDICTED: endoribonuclease Dicer-like [Amphimedon queenslandica]
Length = 1520
Score = 131 bits (329), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 95/303 (31%), Positives = 147/303 (48%), Gaps = 68/303 (22%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALN------------------------- 74
K+ DK +AD E+L G YL + G+ FL L
Sbjct: 1118 KVTDKGIADSTEALLGAYLIAGGLGAGFSFLDWLGLQKPTESSSFSQDVTMSSCNVSRKQ 1177
Query: 75 -----------------ILPQSKIDVHEAL-YGPHPSAVRCPEQARGLDPL--RYIPEC- 113
IL Q+ V + P PS + +D L +P
Sbjct: 1178 SQSSLMSIEEASPCINPILLQNSTHVFSSCCLPPPPSLLDSSAPDTTIDKLLSSAVPGGG 1237
Query: 114 -TQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+ L ++++ F D++ LLQAL+HP+Y N NR+T SYQRLEFLGDA++D+L+T LY F
Sbjct: 1238 RSSLYDKLSWDFSDRALLLQALTHPSYSNKNRVTRSYQRLEFLGDAVLDYLITCCLYTEF 1297
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAV-RLDLHKHLLHDSPRLYENVTRFAQNQEARNHEI 230
+PG+I++ RSA+VNNVTFA AV +L LH +LL+ SP L+ +T + + +
Sbjct: 1298 PSYTPGQITETRSALVNNVTFAEIAVKKLSLHTYLLYLSPSLFRKITEYVEF-------L 1350
Query: 231 SDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRV----------VEYVDVPKALGDVFE 280
++E E E+ ++ C F + ++V ++ G + + ++ PK LGDV E
Sbjct: 1351 QEDERESGSEKELIYCR--FGDQSENVHEEMNGDIAMLEEEEEADITELEPPKVLGDVLE 1408
Query: 281 ALV 283
+L
Sbjct: 1409 SLA 1411
>gi|94450854|gb|ABF19797.1| dicer-like 2 spliceform 1 [Arabidopsis thaliana]
Length = 1386
Score = 130 bits (326), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 78/197 (39%), Positives = 116/197 (58%), Gaps = 22/197 (11%)
Query: 26 EKLPSSSYNFL-DRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI---LPQSKI 81
+ LP S ++ R L K VADVVESL G YL G A++F+ + I L +KI
Sbjct: 1074 DTLPESRNIYVASRRNLKRKSVADVVESLIGAYLSEGGELAALMFMNWVGIKVDLTTTKI 1133
Query: 82 DVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNA 141
P QA L + Y +E +NY+F+DKS L++AL+H +Y
Sbjct: 1134 QRDS------------PIQAEKLVNVGY------MESLLNYSFEDKSLLVEALTHGSYMM 1175
Query: 142 NRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
I YQRLEFLGD+++D+L+T +LY+ + LSPG ++D+RSA VNN +A AV+ +L
Sbjct: 1176 PEIPRCYQRLEFLGDSVLDYLITKHLYDKYPCLSPGLLTDMRSASVNNECYALVAVKANL 1235
Query: 202 HKHLLHDSPRLYENVTR 218
HKH+L+ S L+++++R
Sbjct: 1236 HKHILYASHHLHKHISR 1252
>gi|94450856|gb|ABF19798.1| dicer-like 2 spliceform 2 [Arabidopsis thaliana]
Length = 1374
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 75/184 (40%), Positives = 110/184 (59%), Gaps = 21/184 (11%)
Query: 38 RIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI---LPQSKIDVHEALYGPHPSA 94
R L K VADVVESL G YL G A++F+ + I L +KI
Sbjct: 1075 RRNLKRKSVADVVESLIGAYLSEGGELAALMFMNWVGIKVDLTTTKIQRDS--------- 1125
Query: 95 VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFL 154
P QA L + Y +E +NY+F+DKS L++AL+H +Y I YQRLEFL
Sbjct: 1126 ---PIQAEKLVNVGY------MESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFL 1176
Query: 155 GDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYE 214
GD+++D+L+T +LY+ + LSPG ++D+RSA VNN +A AV+ +LHKH+L+ S L++
Sbjct: 1177 GDSVLDYLITKHLYDKYPCLSPGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHK 1236
Query: 215 NVTR 218
+++R
Sbjct: 1237 HISR 1240
>gi|379987678|gb|AFD22619.1| dicer-like 2 protein [Nicotiana attenuata]
Length = 1403
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 109/197 (55%), Gaps = 15/197 (7%)
Query: 28 LPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEAL 87
+PS R K+ K VADVVE+L G +L S G A+ F++ L + ID +A
Sbjct: 1088 MPSVKMYSRGRQKIKSKRVADVVEALIGAFLSSGGEVAALSFMKWLGV----DIDFVDA- 1142
Query: 88 YGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTS 147
P+ P A L +RY LE ++Y F D S L++AL+H +Y I
Sbjct: 1143 ----PTPRHFPMNAEKLVNVRY------LESLLDYKFHDPSLLVEALTHGSYMLPEIPRC 1192
Query: 148 YQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLH 207
YQRLEFLGDA++D+ VTA+LY + LSPG I+D+RSA VNN +A AV+ LHKH+LH
Sbjct: 1193 YQRLEFLGDAVLDYAVTAHLYFKYPGLSPGFITDLRSASVNNECYAQAAVKAGLHKHILH 1252
Query: 208 DSPRLYENVTRFAQNQE 224
S L + N E
Sbjct: 1253 ASQDLQRQIVNTVLNFE 1269
>gi|145338056|ref|NP_566199.4| protein dicer-like 2 [Arabidopsis thaliana]
gi|334185051|ref|NP_001189798.1| protein dicer-like 2 [Arabidopsis thaliana]
gi|322518659|sp|Q3EBC8.2|DCL2_ARATH RecName: Full=Endoribonuclease Dicer homolog 2; AltName:
Full=Dicer-like protein 2; Short=AtDCL2
gi|332640403|gb|AEE73924.1| protein dicer-like 2 [Arabidopsis thaliana]
gi|332640405|gb|AEE73926.1| protein dicer-like 2 [Arabidopsis thaliana]
Length = 1388
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 77/194 (39%), Positives = 116/194 (59%), Gaps = 16/194 (8%)
Query: 26 EKLPSSSYNFL-DRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVH 84
+ LP S ++ R L K VADVVESL G YL G A++F+ + I K+D
Sbjct: 1076 DTLPESRNIYVASRRNLKRKSVADVVESLIGAYLSEGGELAALMFMNWVGI----KVD-- 1129
Query: 85 EALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRI 144
+ P QA L + Y +E +NY+F+DKS L++AL+H +Y I
Sbjct: 1130 ---FTTTKIQRDSPIQAEKLVNVGY------MESLLNYSFEDKSLLVEALTHGSYMMPEI 1180
Query: 145 TTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKH 204
YQRLEFLGD+++D+L+T +LY+ + LSPG ++D+RSA VNN +A AV+ +LHKH
Sbjct: 1181 PRCYQRLEFLGDSVLDYLITKHLYDKYPCLSPGLLTDMRSASVNNECYALVAVKANLHKH 1240
Query: 205 LLHDSPRLYENVTR 218
+L+ S L+++++R
Sbjct: 1241 ILYASHHLHKHISR 1254
>gi|315258243|gb|ADT91700.1| dicer-like protein 2 [Nicotiana attenuata]
Length = 239
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 81/197 (41%), Positives = 109/197 (55%), Gaps = 15/197 (7%)
Query: 28 LPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEAL 87
+PS R K+ K VADVVE+L G +L S G A+ F++ L + ID +A
Sbjct: 53 MPSVKMYSRGRQKIKSKRVADVVEALIGAFLSSGGEVAALSFMKWLGV----DIDFVDA- 107
Query: 88 YGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTS 147
P+ P A L +RY LE ++Y F D S L++AL+H +Y I
Sbjct: 108 ----PTPRHFPMNAEKLVNVRY------LESLLDYKFHDPSLLVEALTHGSYMLPEIPRC 157
Query: 148 YQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLH 207
YQRLEFLGDA++D+ VTA+LY + LSPG I+D+RSA VNN +A AV+ LHKH+LH
Sbjct: 158 YQRLEFLGDAVLDYAVTAHLYFKYPGLSPGFITDLRSASVNNECYAQAAVKAGLHKHILH 217
Query: 208 DSPRLYENVTRFAQNQE 224
S L + N E
Sbjct: 218 ASQDLQRQIVNTVLNFE 234
>gi|145331748|ref|NP_001078101.1| protein dicer-like 2 [Arabidopsis thaliana]
gi|332640404|gb|AEE73925.1| protein dicer-like 2 [Arabidopsis thaliana]
Length = 1374
Score = 130 bits (326), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 110/181 (60%), Gaps = 15/181 (8%)
Query: 38 RIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRC 97
R L K VADVVESL G YL G A++F+ + I K+D +
Sbjct: 1075 RRNLKRKSVADVVESLIGAYLSEGGELAALMFMNWVGI----KVD-----FTTTKIQRDS 1125
Query: 98 PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
P QA L + Y +E +NY+F+DKS L++AL+H +Y I YQRLEFLGD+
Sbjct: 1126 PIQAEKLVNVGY------MESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDS 1179
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
++D+L+T +LY+ + LSPG ++D+RSA VNN +A AV+ +LHKH+L+ S L+++++
Sbjct: 1180 VLDYLITKHLYDKYPCLSPGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKHIS 1239
Query: 218 R 218
R
Sbjct: 1240 R 1240
>gi|6714410|gb|AAF26098.1|AC012328_1 unknown protein [Arabidopsis thaliana]
Length = 2042
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 74/181 (40%), Positives = 110/181 (60%), Gaps = 15/181 (8%)
Query: 38 RIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRC 97
R L K VADVVESL G YL G A++F+ + I K+D +
Sbjct: 1743 RRNLKRKSVADVVESLIGAYLSEGGELAALMFMNWVGI----KVD-----FTTTKIQRDS 1793
Query: 98 PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
P QA L + Y +E +NY+F+DKS L++AL+H +Y I YQRLEFLGD+
Sbjct: 1794 PIQAEKLVNVGY------MESLLNYSFEDKSLLVEALTHGSYMMPEIPRCYQRLEFLGDS 1847
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
++D+L+T +LY+ + LSPG ++D+RSA VNN +A AV+ +LHKH+L+ S L+++++
Sbjct: 1848 VLDYLITKHLYDKYPCLSPGLLTDMRSASVNNECYALVAVKANLHKHILYASHHLHKHIS 1907
Query: 218 R 218
R
Sbjct: 1908 R 1908
>gi|357448551|ref|XP_003594551.1| Endoribonuclease Dicer [Medicago truncatula]
gi|355483599|gb|AES64802.1| Endoribonuclease Dicer [Medicago truncatula]
Length = 1418
Score = 128 bits (321), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 71/184 (38%), Positives = 114/184 (61%), Gaps = 16/184 (8%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHP 92
Y DR KL KVVADVVE+L G +L + G A+LF+ + I I +E +
Sbjct: 1114 YTRGDR-KLKRKVVADVVEALIGAFLSAGGEMAALLFMDWIGIKVNFNIIPYERQF---- 1168
Query: 93 SAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLE 152
+ CP+ L +R+ LE + Y+F+D+S L++AL+H +Y + YQRLE
Sbjct: 1169 --IACPDN---LVNVRF------LESLLKYSFRDRSLLVEALTHGSYMLPDVPRCYQRLE 1217
Query: 153 FLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
+LGD+++D+L+T +LY + +SPG+++D+RSA VNN +A A+++ LHKH+LH S L
Sbjct: 1218 YLGDSVLDYLITMHLYRVYPGMSPGQLTDMRSASVNNDCYAMSAIKVQLHKHVLHASQEL 1277
Query: 213 YENV 216
++++
Sbjct: 1278 HKHI 1281
>gi|146149942|gb|ABQ02405.1| dicer [Schistosoma mansoni]
Length = 2641
Score = 127 bits (320), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 113/207 (54%), Gaps = 23/207 (11%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID----VHEALYG-PHPSAV 95
+ DK +AD VE+L G YL + G A+ +Q I K D A + P + +
Sbjct: 2118 IPDKSIADCVEALIGCYLTTRGERSALRLMQWFGIDCLHKSDNSQPTARAPWSLPKSNYL 2177
Query: 96 RCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTS-------- 147
E L+ R + +LE +NYTF+D S L+QA +HP+Y+ R+ ++
Sbjct: 2178 DTDENRANLNEARLVWRFDELESSLNYTFKDPSLLIQAFTHPSYHQLRVLSTSNNLSDQS 2237
Query: 148 ----------YQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAV 197
YQRLEFLGDA++D+++T +LYE+ SPG ++D+RSA+VNN FA+ AV
Sbjct: 2238 NLMFSTDLDCYQRLEFLGDAVLDYVITRFLYEDSKQHSPGVLTDLRSALVNNNIFAALAV 2297
Query: 198 RLDLHKHLLHDSPRLYENVTRFAQNQE 224
R+ LHK+ SP+L + F + Q+
Sbjct: 2298 RIGLHKYFRASSPQLLHTIDVFVRYQK 2324
Score = 38.5 bits (88), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 130 LLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
+LQAL T + + + +R+E +GD+ + F+VT +LY + G++S +RS +V N
Sbjct: 1947 ILQAL---TMSCSNDFINLERMETIGDSFLKFVVTVHLYLTYPEAHEGKLSHLRSRIVCN 2003
Query: 190 VTFASYAVRLDLHKHLL 206
DL ++
Sbjct: 2004 SNLYRLGKAKDLQNRMI 2020
>gi|242076428|ref|XP_002448150.1| hypothetical protein SORBIDRAFT_06g022180 [Sorghum bicolor]
gi|241939333|gb|EES12478.1| hypothetical protein SORBIDRAFT_06g022180 [Sorghum bicolor]
Length = 698
Score = 127 bits (319), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 72/191 (37%), Positives = 115/191 (60%), Gaps = 18/191 (9%)
Query: 30 SSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDV-HEALY 88
+ S+++L R K +ADVVESL G +L CG + A FL+ + I K+D + ALY
Sbjct: 184 TKSHHWLHR-----KTIADVVESLLGAFLVECGFKAAFAFLRWIGI----KVDFENSALY 234
Query: 89 GPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSY 148
++ + L + Y+ ++LE+ I YTF+ K LLQA HP++N + Y
Sbjct: 235 RVLDAS------STNLSLMNYM-NISELEELIGYTFKHKGLLLQAFVHPSFNKHS-GGCY 286
Query: 149 QRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
QR+EFLGDA++D+L+ +YLY + L PG+++D++S +NN +FA AV+ +HK+L+ D
Sbjct: 287 QRMEFLGDAVLDYLMASYLYSAYPDLKPGQLTDLKSLALNNNSFAYVAVKKSIHKYLIKD 346
Query: 209 SPRLYENVTRF 219
S L + +F
Sbjct: 347 SKSLTAAINKF 357
>gi|356533095|ref|XP_003535104.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
Length = 1414
Score = 127 bits (319), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 67/178 (37%), Positives = 111/178 (62%), Gaps = 15/178 (8%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPE 99
KL K+VADVVE+L G +L + G + A+LF+ + I K+ ++ Y H PE
Sbjct: 1087 KLRQKIVADVVEALIGAFLSTGGEKAALLFMDWVGI----KVSFNKIPYDRHFDIQ--PE 1140
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAII 159
+ + + LE ++NY+F D+S L++A++H +Y + YQRLEFLGD+++
Sbjct: 1141 K---------LVNVSFLESQLNYSFHDRSLLVEAVTHGSYMLPEVPRCYQRLEFLGDSVL 1191
Query: 160 DFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
D+L+T +LY + ++PG+++D+RSA VNN +A A++ LHKH+LH S L+ +V+
Sbjct: 1192 DYLITWHLYNKYPGMTPGQLTDMRSASVNNDCYAWSAIKHGLHKHVLHASQELHMHVS 1249
>gi|160285502|pdb|2EB1|A Chain A, Crystal Structure Of The C-Terminal Rnase Iii Domain Of
Human Dicer
gi|160285503|pdb|2EB1|B Chain B, Crystal Structure Of The C-Terminal Rnase Iii Domain Of
Human Dicer
gi|160285504|pdb|2EB1|C Chain C, Crystal Structure Of The C-Terminal Rnase Iii Domain Of
Human Dicer
Length = 200
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 104/168 (61%), Gaps = 20/168 (11%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
EK+INY F++K++LLQA +H +Y+ N IT YQRLEFLGDAI+D+L+T +LYE+ S
Sbjct: 11 FEKKINYRFKNKAYLLQAFTHASYHYNTITDCYQRLEFLGDAILDYLITKHLYEDPRQHS 70
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEE 235
PG ++D+RSA+VNN FAS AV+ D HK+ SP L+ + F Q Q +N
Sbjct: 71 PGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVIDDFVQFQLEKN-------- 122
Query: 236 EEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
E +G ++ + +++ E ++VPKA+GD+FE+L
Sbjct: 123 ---EMQG---------MDSELRRSEEDEEKEEDIEVPKAMGDIFESLA 158
>gi|379987682|gb|AFD22621.1| dicer-like 4 protein [Nicotiana attenuata]
Length = 1622
Score = 126 bits (317), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 102/179 (56%), Gaps = 11/179 (6%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L K +AD+VE+L G ++ G + A+ FL+ + I D E+ +A
Sbjct: 1133 LRKKTIADIVEALVGAFVVDSGFKAAIAFLKWIGIY----TDFEESQVKSICAA------ 1182
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
++ PL + +E + YTF K L+QA HP+YN N YQRLEFLGDA++D
Sbjct: 1183 SKVFMPLADEIDIQAIENLLGYTFVHKGLLIQAFIHPSYN-NHGGGCYQRLEFLGDAVLD 1241
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
+L+T+YLY + L PG+++D+RS VNN TFA AV H H+L DS L E++TR+
Sbjct: 1242 YLITSYLYSVYPKLKPGQLTDLRSVSVNNTTFAVVAVHQSFHSHILCDSSGLRESITRY 1300
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%)
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLH 202
S +RLE LGDA + F V +++ ++ G+++ RS +VNN + AVR +L
Sbjct: 1022 SLERLEVLGDAFLKFAVGRHVFLTYNAFDEGQLTRRRSNIVNNSYLYTIAVRNNLQ 1077
>gi|397529815|gb|AFO53518.1| dicer-like protein 4 [Solanum lycopersicum]
Length = 1620
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 69/179 (38%), Positives = 104/179 (58%), Gaps = 11/179 (6%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L K +AD+VE+L G ++ G + A+ FL+ I +H P ++ C
Sbjct: 1130 LRKKTIADIVEALVGAFVVDSGFKAAIAFLKW--------IGIHTDFKEPQLKSI-C-SA 1179
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
++ PL + +E+ + Y+F K L+QA HP+YN + YQRLEFLGDA++D
Sbjct: 1180 SKVFMPLADEIDVLGIERLLGYSFIHKGLLIQAFIHPSYNRHG-GGCYQRLEFLGDAVLD 1238
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
+L+T+YLY + L PG+++D+RS VNN TFA AVR H H+L DS L E++TR+
Sbjct: 1239 YLITSYLYSVYPKLKPGQLTDLRSISVNNNTFAVVAVRQSFHSHILCDSSDLRESITRY 1297
>gi|224101241|ref|XP_002312197.1| dicer-like protein [Populus trichocarpa]
gi|222852017|gb|EEE89564.1| dicer-like protein [Populus trichocarpa]
Length = 1468
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 77/210 (36%), Positives = 117/210 (55%), Gaps = 27/210 (12%)
Query: 8 DFDLYQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAM 67
DF L ++P G+K+ R K+ K +ADVVE+L G YL + G A+
Sbjct: 1138 DF-LSEEPLSKGRKIY-----------IRGRRKVKSKTIADVVEALIGAYLSTGGEVTAL 1185
Query: 68 LFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
LF+ + I K+D Y H QA +RY LE +NY+F D
Sbjct: 1186 LFMDWIGI----KVDFMNTPYERHIQL-----QAEKFVNVRY------LESLLNYSFNDP 1230
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S L++AL+H +Y I YQRLEFLGDA++D+L+T ++Y+ + +SPG ++D+RSA V
Sbjct: 1231 SLLVEALTHGSYMLPEIPRCYQRLEFLGDAVLDYLITLHMYKEYPGMSPGLLTDLRSASV 1290
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
NN +A AV++ L +H+LH S L++++
Sbjct: 1291 NNDCYALSAVKVGLDRHILHASHDLHKHIV 1320
>gi|168177333|pdb|3C4T|A Chain A, Structure Of Rnaseiiib And Dsrna Binding Domains Of Mouse
Dicer
Length = 265
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 111/186 (59%), Gaps = 22/186 (11%)
Query: 98 PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
P+ + L+ L I EK+INY F++K++LLQA +H +Y+ N IT YQRLEFLGDA
Sbjct: 2 PDAEKTLNHL--ISGFETFEKKINYRFKNKAYLLQAFTHASYHYNTITDXYQRLEFLGDA 59
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
I+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP L+ +
Sbjct: 60 ILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVID 119
Query: 218 RFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGD 277
F + Q +N E +G ++ + +++ E ++VPKA+GD
Sbjct: 120 DFVKFQLEKN-----------EMQG---------MDSELRRSEEDEEKEEDIEVPKAMGD 159
Query: 278 VFEALV 283
+FE+L
Sbjct: 160 IFESLA 165
>gi|167046039|gb|ABZ10551.1| dicer 2 [Nematostella vectensis]
Length = 1162
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 68/174 (39%), Positives = 107/174 (61%), Gaps = 17/174 (9%)
Query: 112 ECTQLEKRINYTFQDKSFLLQALSHPTYNA--NRITTSYQRLEFLGDAIIDFLVTAYLYE 169
E +E + YTF+D+ LLQAL+H +Y + + +SY++LEFLGDA++D+LVT ++ +
Sbjct: 934 ELALVEASLGYTFRDRDILLQALTHTSYPRAYSSVNSSYEQLEFLGDALLDYLVTRHVLQ 993
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHE 229
F LSPG I+D+RSA+VNN + A ++ D HKH+ S L++ V RF +
Sbjct: 994 RFPRLSPGAITDLRSAVVNNYSLACLTIQRDFHKHMRSMSMALFKVVRRFVR-------R 1046
Query: 230 ISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+S+ EE+E + + L+ +E+ GR E ++VPK LGD+FEAL+
Sbjct: 1047 LSEIEEKETRPDQVYSKLLLTTVED--------GRGGEAIEVPKVLGDLFEALL 1092
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 39/62 (62%), Gaps = 3/62 (4%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
+ +L+AL+ T +AN I ++RLE GDA I + ++ LY +F +++ G +S +R V
Sbjct: 582 TLILRALT--TTSANDII-DHERLEIYGDAFIKYAISELLYSDFPNVNEGRLSFLRGLRV 638
Query: 188 NN 189
+N
Sbjct: 639 SN 640
>gi|297735235|emb|CBI17597.3| unnamed protein product [Vitis vinifera]
Length = 1340
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 108/186 (58%), Gaps = 15/186 (8%)
Query: 37 DRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVR 96
+R KL K +ADVVE+L G +L + G A++F++ L I +D V+
Sbjct: 1034 ERRKLKSKRIADVVEALIGAFLSTGGETAALIFMRWLGI----NVDF-----------VK 1078
Query: 97 CPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGD 156
P + L+ + LE +NY+F+D S L++AL+H +Y I YQRLEFLGD
Sbjct: 1079 VPYKRDFPVILKRHVNVSYLESILNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGD 1138
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENV 216
A++D+L+T +LY + +SPG ++D+RSA VNN +A AV+ LH+H+LH S L+ ++
Sbjct: 1139 AVLDYLMTMHLYHKYPGMSPGLLTDLRSASVNNDCYAQSAVKAKLHQHILHSSQELHRHI 1198
Query: 217 TRFAQN 222
N
Sbjct: 1199 VVTVGN 1204
>gi|359476600|ref|XP_002269915.2| PREDICTED: endoribonuclease Dicer homolog 2-like [Vitis vinifera]
Length = 1394
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 70/186 (37%), Positives = 108/186 (58%), Gaps = 15/186 (8%)
Query: 37 DRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVR 96
+R KL K +ADVVE+L G +L + G A++F++ L I +D V+
Sbjct: 1088 ERRKLKSKRIADVVEALIGAFLSTGGETAALIFMRWLGI----NVDF-----------VK 1132
Query: 97 CPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGD 156
P + L+ + LE +NY+F+D S L++AL+H +Y I YQRLEFLGD
Sbjct: 1133 VPYKRDFPVILKRHVNVSYLESILNYSFRDPSLLVEALTHGSYMLPEIPRCYQRLEFLGD 1192
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENV 216
A++D+L+T +LY + +SPG ++D+RSA VNN +A AV+ LH+H+LH S L+ ++
Sbjct: 1193 AVLDYLMTMHLYHKYPGMSPGLLTDLRSASVNNDCYAQSAVKAKLHQHILHSSQELHRHI 1252
Query: 217 TRFAQN 222
N
Sbjct: 1253 VVTVGN 1258
>gi|168177328|pdb|3C4B|A Chain A, Structure Of Rnaseiiib And Dsrna Binding Domains Of Mouse
Dicer
Length = 265
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 72/186 (38%), Positives = 106/186 (56%), Gaps = 22/186 (11%)
Query: 98 PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
P+ + L+ L I EK+INY F++K++LLQA +H +Y+ N IT YQRLEFLGDA
Sbjct: 2 PDAEKTLNHL--ISGFETFEKKINYRFKNKAYLLQAFTHASYHYNTITDXYQRLEFLGDA 59
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
I+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+ SP L+ +
Sbjct: 60 ILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKAVSPELFHVID 119
Query: 218 RFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGD 277
F + Q +N + E +++ E ++VPKA GD
Sbjct: 120 DFVKFQLEKNEXQGXDSELR--------------------RSEEDEEKEEDIEVPKAXGD 159
Query: 278 VFEALV 283
+FE+L
Sbjct: 160 IFESLA 165
>gi|426204654|gb|AFY13245.1| dicer-2, partial [Schistocerca gregaria]
Length = 357
Score = 123 bits (309), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 65/147 (44%), Positives = 96/147 (65%), Gaps = 13/147 (8%)
Query: 28 LPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEAL 87
+P++S F+ + DK +AD +E+LTGVYL++ G+ GA+ L +L +LP K
Sbjct: 218 MPNNSELFIGVQTVSDKSLADALEALTGVYLKAYGLSGAIALLNSLGVLPAKKA------ 271
Query: 88 YGPHPSAVRCPEQARGLDPLRY------IPECTQLEKRINYTFQDKSFLLQALSHPTYNA 141
PH R PE+ + LR+ + + +LE+ +NY F+D+ FLLQAL+HP+++
Sbjct: 272 -SPHILFERPPERPLLQESLRHQYLDFHLGDTEELEETLNYRFKDRGFLLQALTHPSWSD 330
Query: 142 NRITTSYQRLEFLGDAIIDFLVTAYLY 168
NRIT YQRLEFLGDAI+DFLVT+Y+Y
Sbjct: 331 NRITDCYQRLEFLGDAILDFLVTSYIY 357
>gi|147833654|emb|CAN77284.1| hypothetical protein VITISV_043738 [Vitis vinifera]
Length = 1296
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 107/180 (59%), Gaps = 15/180 (8%)
Query: 37 DRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVR 96
+R KL K +ADVVE+L G +L + G A++F++ L I +D V+
Sbjct: 990 ERRKLKSKRIADVVEALIGAFLSTGGETAALIFMRWLGI----NVDF-----------VK 1034
Query: 97 CPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGD 156
P + L+ + LE +NY+F+D S L+++L+H +Y I YQRLEFLGD
Sbjct: 1035 VPYKRDFPVILKRHVNVSYLESILNYSFRDPSLLVESLTHGSYMLPEIPRCYQRLEFLGD 1094
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENV 216
A++D+L+T +LY + +SPG ++D+RSA VNN +A AV+ LH+H+LH S L+ ++
Sbjct: 1095 AVLDYLMTMHLYHKYPGMSPGLLTDLRSASVNNDCYAQSAVKAKLHQHILHSSQELHRHI 1154
>gi|356532427|ref|XP_003534774.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
Length = 1421
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 108/183 (59%), Gaps = 15/183 (8%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPE 99
KL K++ADVVE+L G +L + G A+LF+ + I K+ + Y H
Sbjct: 1120 KLNRKIIADVVEALIGAFLSTGGEISALLFMDWVGI----KVSFDKIPYERHFDI----- 1170
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAII 159
Q L +R+ LE ++ Y+F D S L++AL+H +Y + YQRLEFLGD+++
Sbjct: 1171 QPEKLLNVRF------LESQLKYSFHDHSLLVEALTHGSYMLPEVPRCYQRLEFLGDSVL 1224
Query: 160 DFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
D+L+T +LY + +SPG+++D+R+A VNN +A A++ LHKH+LH S L++++
Sbjct: 1225 DYLITWHLYNEYPGMSPGQLTDMRAASVNNDCYAWSAIKHGLHKHVLHASQELHKHIAVT 1284
Query: 220 AQN 222
N
Sbjct: 1285 LNN 1287
>gi|161579129|gb|ABX72052.1| Dicer-1 protein [Tribolium castaneum]
Length = 157
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 70/163 (42%), Positives = 100/163 (61%), Gaps = 17/163 (10%)
Query: 52 SLTGVYLRSCGIEGAMLFLQALNI--LPQSKIDVHEALYG-------PHPSAVRCPEQAR 102
+L G YL CG GA+LF+ L I LPQ + + YG P + + P +
Sbjct: 1 ALIGAYLIECGPRGALLFMAWLGIRVLPQ----LEDGTYGEIELPKSPLSNHLTYPREE- 55
Query: 103 GLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFL 162
LD L + Q E+ I Y F+D+S+LLQAL+H +++ N +T YQRLEFLGDA++D+L
Sbjct: 56 -LDML--LDGYDQFERHIGYKFRDRSYLLQALTHASFSPNTLTDCYQRLEFLGDAVLDYL 112
Query: 163 VTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
+T +LYE+ SPG ++D+RSA+VNN FAS AVR H++
Sbjct: 113 ITRHLYEDTRMHSPGALTDLRSALVNNTIFASLAVRNGFHRYF 155
>gi|413933740|gb|AFW68291.1| hypothetical protein ZEAMMB73_565304 [Zea mays]
Length = 462
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 124/245 (50%), Gaps = 19/245 (7%)
Query: 36 LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAV 95
L +I + K +AD VE+LTG YL +CG A+ F++AL + +++H +
Sbjct: 156 LKKISIKSKRIADTVEALTGAYLSTCGELAAVHFIKALGM----DVELHSKMQVERTITT 211
Query: 96 RCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLG 155
+ E + + L+ + Y F D S L++AL+H +YN IT +RLEFLG
Sbjct: 212 KSEE----------LIDAESLQTMLKYVFYDTSLLVEALTHSSYNITGITACNERLEFLG 261
Query: 156 DAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLY-- 213
DA++D+++T Y Y + + +P ++++R A VNN +A AV+ LHKH+LH S +
Sbjct: 262 DAVLDYILTYYFYRKYPNCTPALLTNLRKASVNNCCYAHAAVKAGLHKHILHSSSKQMVN 321
Query: 214 --ENVTR-FAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVD 270
EN R F+ IS E+ + E I + +K+V R++E +
Sbjct: 322 DLENSGRSFSGPSHGWEAGISLPEDLADLFEAIAGAIYVDSGNDKEVVWSAIRRLLEPLA 381
Query: 271 VPKAL 275
P +
Sbjct: 382 TPGTM 386
>gi|156371137|ref|XP_001628622.1| predicted protein [Nematostella vectensis]
gi|156215603|gb|EDO36559.1| predicted protein [Nematostella vectensis]
Length = 261
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 107/176 (60%), Gaps = 21/176 (11%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTY--NANRITTSYQRLEFLGDAIIDFLVTAYL 167
+ E +E + YTF+D+ LLQAL+H +Y + + +SY++LEFLGDA++D+LVT ++
Sbjct: 3 LGELALVEASLGYTFRDRDILLQALTHTSYPRAYSSVNSSYEQLEFLGDALLDYLVTRHV 62
Query: 168 YENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARN 227
+ F LSPG I+D+RSA+VNN + A ++ D HKH+ S L++ V RF + R
Sbjct: 63 LQRFPRLSPGAITDLRSAVVNNYSLACLTIQRDFHKHMRSMSMALFKVVRRFVR----RL 118
Query: 228 HEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
EI ++E ++ L+ +E+ GR E ++VPK LGD+FEAL+
Sbjct: 119 SEIEEKETRPDQ-------LLLTTVED--------GRGGEAIEVPKVLGDLFEALL 159
>gi|242033791|ref|XP_002464290.1| hypothetical protein SORBIDRAFT_01g015670 [Sorghum bicolor]
gi|241918144|gb|EER91288.1| hypothetical protein SORBIDRAFT_01g015670 [Sorghum bicolor]
Length = 1385
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 104/193 (53%), Gaps = 19/193 (9%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPE 99
KL K +AD VE+L G YL + G + A LFL++L + I+ H+ P +
Sbjct: 1074 KLKSKRIADSVEALIGAYLSAAGEQAAYLFLKSLGM----DIEFHKM-----PVERKITI 1124
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAII 159
A LR LE ++Y F D S LL+AL+H +Y T YQRLEFLGDA++
Sbjct: 1125 NAENFINLR------SLELMLDYNFSDPSLLLEALTHGSYQIAGTTACYQRLEFLGDAVL 1178
Query: 160 DFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT-- 217
D + T Y Y + +P ++D+RSA VNN +A AV+ LHKH+LH S L++ +
Sbjct: 1179 DHIFTDYFYHQYPECTPELLTDLRSASVNNSCYAHAAVKAGLHKHILHSSSALHKKMADY 1238
Query: 218 --RFAQNQEARNH 228
+F Q+ +H
Sbjct: 1239 LDKFEQSFSGPSH 1251
>gi|391348710|ref|XP_003748587.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
Length = 1732
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 132/254 (51%), Gaps = 35/254 (13%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQAL----------NILPQSKIDVHEALYGPHPS 93
KV DVVE+L G YL CG GA+ F + + N L K+D A P
Sbjct: 1373 KVGGDVVEALAGTYLEQCGPIGALRFFRWIGMDLGDTESNNFLDAFKLDFSAAQNIP--- 1429
Query: 94 AVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEF 153
A L +Y+ E ++EK+I++TF+ K +LQA++H + + +T Y RL F
Sbjct: 1430 -------AECLKSYQYLIE--KVEKQIDFTFKSKGLVLQAITHHSCRDHLLTEDYNRLAF 1480
Query: 154 LGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLY 213
+G+A+ D+L+T Y+Y S+L PG++SD+RSA++NN A VR +LH LL+ + +L+
Sbjct: 1481 IGEAVADYLLTLYIYGLSSNLDPGQLSDLRSALINNQVTAYAVVRAELHTVLLYTNSKLF 1540
Query: 214 ENVTRFAQNQE----ARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
+ ++ +N + N + D E ++ EE + R L L + G V ++
Sbjct: 1541 SAIRKYLENIDDIGLRLNTVLGDWETDDAEEAEVPRPLARIL-------QSILGAV--FI 1591
Query: 270 DVPKALGDVFEALV 283
D K+ V+ LV
Sbjct: 1592 DSGKSFESVWRILV 1605
>gi|148907962|gb|ABR17101.1| unknown [Picea sitchensis]
Length = 685
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 68/182 (37%), Positives = 104/182 (57%), Gaps = 11/182 (6%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARG 103
K +ADVVE+L G YL G A+ FL+ + I +ID +L G C
Sbjct: 163 KTIADVVEALIGAYLVDSGFGAALAFLKWIGI----EIDFDTSLVGE-----VCIRSRNN 213
Query: 104 LDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLV 163
L ++ I + +LE+ + Y F K LL+A +HP++N + YQRLEFLGDA++D+++
Sbjct: 214 LSLIKCI-DIDELERLLGYNFSYKGLLLEAFAHPSFNEHN-GGCYQRLEFLGDAVLDYII 271
Query: 164 TAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQ 223
T+YLY + + PG ++D+RS VNN +FA AVR L+ +L+ S L VT++
Sbjct: 272 TSYLYSVYPDMKPGYLTDMRSMTVNNESFACVAVRHGLYMYLIQKSDSLSSAVTKYVDFM 331
Query: 224 EA 225
+A
Sbjct: 332 KA 333
>gi|212723814|ref|NP_001131630.1| uncharacterized protein LOC100192986 [Zea mays]
gi|194692090|gb|ACF80129.1| unknown [Zea mays]
Length = 365
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 112/208 (53%), Gaps = 23/208 (11%)
Query: 28 LPSSSYNFLDRI--KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHE 85
+P Y+ DR KL K +AD VE+L G YL + G + A +FL++L + I+ H
Sbjct: 40 VPGVGYDICDRSLRKLKSKRIADSVEALIGAYLSTAGEQAAYIFLKSLGM----DIEFH- 94
Query: 86 ALYGPHPSAVRCP-EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRI 144
+ P E+ + +I LE ++Y+F D S L++AL+H +Y
Sbjct: 95 ----------KMPIERVITIKAEEFI-NVKSLELLLDYSFNDPSLLMEALTHGSYQIAGT 143
Query: 145 TTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKH 204
T YQRLEFLGDA++D + T Y Y + +P ++D+RSA VNN +A AV+ LHKH
Sbjct: 144 TPCYQRLEFLGDAVLDHIFTDYFYHQYPECTPELLTDLRSASVNNSCYAHAAVKAGLHKH 203
Query: 205 LLHDSPRLYENVT----RFAQNQEARNH 228
+LH S L++ + +F Q+ +H
Sbjct: 204 VLHSSSALHKRMADYLDKFEQSFSGPSH 231
>gi|358253873|dbj|GAA53880.1| endoribonuclease Dicer [Clonorchis sinensis]
Length = 2384
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 70/205 (34%), Positives = 109/205 (53%), Gaps = 23/205 (11%)
Query: 43 DKVVADVVESLTGVYLRSCGIEGAMLFLQALNI----LPQSKIDVHEALYGPHPSAVRCP 98
DK +AD VE+L G YL + G A+ ++ I P ++ A + P +
Sbjct: 1922 DKSIADCVEALIGCYLTARGERSALRLMRWFGIDCLPGPDVRLRPRGAPWAIPPPLIPLN 1981
Query: 99 EQARG-LDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITT----------- 146
+ R L+ R +LE ++NY F+D + L+QA +HP+Y+ R T
Sbjct: 1982 DPRRAQLEEARLSWRFDELEAKLNYKFRDPTLLIQAFTHPSYHQLRKTLPVNPDDDPFSS 2041
Query: 147 -------SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRL 199
YQRLEFLGDA++D+++T +LYE+ SPG ++D+RSA+VNN FA+ +VR
Sbjct: 2042 TFLTDTDCYQRLEFLGDAVLDYVITRFLYEDSQQHSPGVLTDLRSALVNNNIFAALSVRA 2101
Query: 200 DLHKHLLHDSPRLYENVTRFAQNQE 224
LH+ L SP+L + F + Q+
Sbjct: 2102 GLHQFLRASSPQLLHTIDVFVRYQK 2126
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 42/76 (55%), Gaps = 7/76 (9%)
Query: 130 LLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
+LQAL T + + + +R+E +GD+ + F+ T +LY + + G++S +RS +V N
Sbjct: 1742 VLQAL---TMSCSNDFINLERMETIGDSFLKFVATVHLYLTYPNAHEGKLSHMRSRVVCN 1798
Query: 190 VTFASYAVRLDLHKHL 205
S RL KHL
Sbjct: 1799 ----SNLYRLGRAKHL 1810
>gi|413933739|gb|AFW68290.1| hypothetical protein ZEAMMB73_539070 [Zea mays]
Length = 707
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 112/208 (53%), Gaps = 23/208 (11%)
Query: 28 LPSSSYNFLDRI--KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHE 85
+P Y+ DR KL K +AD VE+L G YL + G + A +FL++L + I+ H
Sbjct: 382 VPGVGYDICDRSLRKLKSKRIADSVEALIGAYLSTAGEQAAYIFLKSLGM----DIEFH- 436
Query: 86 ALYGPHPSAVRCP-EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRI 144
+ P E+ + +I LE ++Y+F D S L++AL+H +Y
Sbjct: 437 ----------KMPIERVITIKAEEFI-NVKSLELLLDYSFNDPSLLMEALTHGSYQIAGT 485
Query: 145 TTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKH 204
T YQRLEFLGDA++D + T Y Y + +P ++D+RSA VNN +A AV+ LHKH
Sbjct: 486 TPCYQRLEFLGDAVLDHIFTDYFYHQYPECTPELLTDLRSASVNNSCYAHAAVKAGLHKH 545
Query: 205 LLHDSPRLYENVT----RFAQNQEARNH 228
+LH S L++ + +F Q+ +H
Sbjct: 546 VLHSSSALHKRMADYLDKFEQSFSGPSH 573
>gi|449442659|ref|XP_004139098.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Cucumis sativus]
Length = 1393
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 77/252 (30%), Positives = 121/252 (48%), Gaps = 64/252 (25%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI------LPQSK---IDVHEALYGP 90
K+ K +ADVVE+L G YL + G + AM FL + I +P + +DVH+ +
Sbjct: 1088 KIKSKRIADVVEALIGAYLSTGGEKAAMQFLNRIGIEVNFDFVPYERPFRVDVHKLINVG 1147
Query: 91 HPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQR 150
H LE + YTF D+S LL+A++H +Y I YQR
Sbjct: 1148 H------------------------LESLLKYTFNDRSLLLEAMTHGSYMLPEIPRCYQR 1183
Query: 151 LEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSP 210
LEFLGD+++D+ +T +LY + ++P ++D+RSA V+N ++ A++ LHK +LH S
Sbjct: 1184 LEFLGDSVLDYAITVHLYNKYPGMTPELLTDMRSASVSNDCYSRTALKAQLHKSILHCSH 1243
Query: 211 RLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVD 270
L+++++ QN E + E + E E +
Sbjct: 1244 DLHKHISSAVQNFETLSSEATYGWESE-------------------------------IS 1272
Query: 271 VPKALGDVFEAL 282
PK LGDV E+L
Sbjct: 1273 FPKVLGDVIESL 1284
>gi|242033789|ref|XP_002464289.1| hypothetical protein SORBIDRAFT_01g015666 [Sorghum bicolor]
gi|241918143|gb|EER91287.1| hypothetical protein SORBIDRAFT_01g015666 [Sorghum bicolor]
Length = 462
Score = 117 bits (294), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 100/177 (56%), Gaps = 15/177 (8%)
Query: 36 LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAV 95
LD I + K +AD VE+LTG YL +CG A+ F+++L + +++H + +
Sbjct: 156 LDEIPIKSKRIADTVEALTGAYLSACGELAAVHFIKSLGM----DVELHSKMQVERIVST 211
Query: 96 RCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLG 155
+ E + L+ I Y F D S L++AL+H +YN ITT +RLEFLG
Sbjct: 212 KSEE----------FIDVESLQTIIGYVFDDSSLLIEALTHSSYNTAGITTCNERLEFLG 261
Query: 156 DAIIDFLVTAYLYEN-FSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPR 211
DA++D+++T Y Y + +P ++++R A VNN +A AV+ LHKH+LH S +
Sbjct: 262 DAVLDYILTDYFYRKYYPKCTPALLTNLRKASVNNWCYAHAAVKAGLHKHILHSSSK 318
>gi|391345092|ref|XP_003746827.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
Length = 1446
Score = 117 bits (293), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 129/254 (50%), Gaps = 54/254 (21%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQ----------ALNILPQSKIDVHEALYGPHPS 93
K+ AD VE++ GVYL G GA+ FL+ + + L + + + G H
Sbjct: 1113 KICADSVEAMIGVYLERSGPIGALEFLRYLGLSLSDSDSGSFLSRFDLSYDPVVGGNHDY 1172
Query: 94 -AVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLE 152
++R R+ +++E + Y F+++ +LL+A++H +YN NR+T SY+RLE
Sbjct: 1173 ISIR-----------RHNDVMSRVESILGYRFKNRLYLLEAITHQSYN-NRVTHSYERLE 1220
Query: 153 FLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
FLGDA+ID+LV+ +++ N HL PG+++ +RSA+V N FA + L + LLH SP L
Sbjct: 1221 FLGDAVIDYLVSCFIFTNDPHLGPGQLTSVRSALVCNNQFAQIVTKAGLSRCLLHRSPLL 1280
Query: 213 YENVTRFAQNQEAR---NHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
+ +T + + E + I D+E E+ + V
Sbjct: 1281 FRMMTSYTEAVEIGRPCDSFIGDDETED----------------------------ADLV 1312
Query: 270 DVPKALGDVFEALV 283
D PK GD+ E+L+
Sbjct: 1313 DAPKPFGDLMESLI 1326
>gi|242039323|ref|XP_002467056.1| hypothetical protein SORBIDRAFT_01g018890 [Sorghum bicolor]
gi|241920910|gb|EER94054.1| hypothetical protein SORBIDRAFT_01g018890 [Sorghum bicolor]
Length = 1586
Score = 117 bits (292), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 102/183 (55%), Gaps = 10/183 (5%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID-VHEALYGPHPSAVRCPE 99
+ K V+D VE+L G Y GI A+ ++ I + ++ V +A Y + S
Sbjct: 1115 MCSKTVSDCVEALVGAYYVGGGITAAIWVMRWFGIDVRCDMELVQKAKYNSNAS------ 1168
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAII 159
Q L L+ E LE ++ Y F K LL+A+SHP+ + YQRLEFLGD+++
Sbjct: 1169 QLCYLSKLKVFEE---LEAKLKYNFSVKGLLLEAVSHPSLQELGVDYCYQRLEFLGDSVL 1225
Query: 160 DFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
D L+T +LY + + PGE++D+RSA+V+N FA VR ++H HL H S L E VT +
Sbjct: 1226 DLLITQHLYATHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGILLEQVTEY 1285
Query: 220 AQN 222
++
Sbjct: 1286 VRS 1288
Score = 43.1 bits (100), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 59/119 (49%), Gaps = 13/119 (10%)
Query: 114 TQLEKRINYTFQ-DKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
+QL + I+YT + S +L+A++ T T S +RLE LGD+++ +++ L+ +
Sbjct: 968 SQLRRDISYTQRIPSSLILEAIT--TLRCCE-TFSLERLELLGDSVLKYVIGCDLFLRYP 1024
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEIS 231
G +SD+RS V N T LHKH + S + Y T F + +IS
Sbjct: 1025 MKHEGHLSDMRSKAVCNAT---------LHKHGICRSLQGYIRDTAFDPRRWVAPGQIS 1074
>gi|156368540|ref|XP_001627751.1| predicted protein [Nematostella vectensis]
gi|156214670|gb|EDO35651.1| predicted protein [Nematostella vectensis]
Length = 199
Score = 117 bits (292), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 94/171 (54%), Gaps = 29/171 (16%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
EKRI Y F +K +L+QAL+H +Y+ NR+T YQRLEFLGDA++DFLVT +Y ++L
Sbjct: 4 FEKRIGYEFSNKLYLIQALTHASYSQNRLTDCYQRLEFLGDALLDFLVTELIYSRNTNLD 63
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF---AQNQEARNHEISD 232
PGE++D+R A+VNN FA AV+ +K L SP + + F + +EAR +
Sbjct: 64 PGELTDLRQALVNNNIFAEIAVKHGFNKSLFQMSPEWFNKIGVFVDHVKEREARGIQDPF 123
Query: 233 EEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
++EEGI + PK LGD+FE++
Sbjct: 124 LTLSNDDEEGI--------------------------EAPKVLGDIFESVA 148
>gi|218195189|gb|EEC77616.1| hypothetical protein OsI_16596 [Oryza sativa Indica Group]
Length = 1576
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 125/254 (49%), Gaps = 49/254 (19%)
Query: 30 SSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYG 89
+ S+++L R KV+ADVVESL G +L G + A FL + I +D +
Sbjct: 1065 TRSHHWLHR-----KVIADVVESLIGAFLVEGGFKAAFAFLHWIGI----DVDFN----- 1110
Query: 90 PHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
+P+ R + + L + LE+ I Y F+ K LLQA HP+++ + YQ
Sbjct: 1111 -NPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLLQAFVHPSFSQHS-GGCYQ 1168
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDA++++++T+YLY + + PG+I+D+RS V N + A AV +HKHL+ DS
Sbjct: 1169 RLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIHKHLIKDS 1228
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
L +++F + N EKD ++E
Sbjct: 1229 NHLTSAISKFEMYVKLSN-------------------------SEKD--------LLEEP 1255
Query: 270 DVPKALGDVFEALV 283
PKALGD+ E+ +
Sbjct: 1256 ACPKALGDIVESCI 1269
>gi|296081735|emb|CBI20740.3| unnamed protein product [Vitis vinifera]
Length = 1688
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 104/185 (56%), Gaps = 18/185 (9%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+G K +AD VE+L G Y G+ A L+++ IDV PS V ++
Sbjct: 1204 MGSKTIADCVEALIGAYYVGGGLNAA------LHLMKWFGIDVE-----LEPSLV---DE 1249
Query: 101 ARGLDPLR-YIPECTQ---LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGD 156
A LR YIP+ + LE +I Y F K LL+A++H T + YQRLEFLGD
Sbjct: 1250 AIATASLRTYIPKANEIEILESKIGYEFSVKGLLLEAITHATEQELGVGYCYQRLEFLGD 1309
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENV 216
+++D L+T +LY++ + PGE++D+RSA VNN +FA AVR +L +HL H S L +
Sbjct: 1310 SVLDVLITWHLYQSHRDIDPGELTDLRSASVNNESFAQVAVRRNLQQHLQHCSGLLLGQI 1369
Query: 217 TRFAQ 221
+A+
Sbjct: 1370 KEYAK 1374
>gi|359475987|ref|XP_002280293.2| PREDICTED: endoribonuclease Dicer homolog 3a-like [Vitis vinifera]
Length = 1648
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 71/185 (38%), Positives = 104/185 (56%), Gaps = 18/185 (9%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+G K +AD VE+L G Y G+ A L+++ IDV PS V ++
Sbjct: 1194 MGSKTIADCVEALIGAYYVGGGLNAA------LHLMKWFGIDVE-----LEPSLV---DE 1239
Query: 101 ARGLDPLR-YIPECTQ---LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGD 156
A LR YIP+ + LE +I Y F K LL+A++H T + YQRLEFLGD
Sbjct: 1240 AIATASLRTYIPKANEIEILESKIGYEFSVKGLLLEAITHATEQELGVGYCYQRLEFLGD 1299
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENV 216
+++D L+T +LY++ + PGE++D+RSA VNN +FA AVR +L +HL H S L +
Sbjct: 1300 SVLDVLITWHLYQSHRDIDPGELTDLRSASVNNESFAQVAVRRNLQQHLQHCSGLLLGQI 1359
Query: 217 TRFAQ 221
+A+
Sbjct: 1360 KEYAK 1364
>gi|251764670|sp|A7LFZ6.1|DCL4_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 4; AltName:
Full=Dicer-like protein 4; Short=OsDCL4; AltName:
Full=Protein SHOOT ORGANIZATION 1
gi|152926631|gb|ABS32306.1| dicer-like protein [Oryza sativa Japonica Group]
Length = 1657
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 125/254 (49%), Gaps = 49/254 (19%)
Query: 30 SSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYG 89
+ S+++L R KV+ADVVESL G +L G + A FL + I +D +
Sbjct: 1146 TRSHHWLHR-----KVIADVVESLIGAFLVEGGFKAAFAFLHWIGI----DVDFN----- 1191
Query: 90 PHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
+P+ R + + L + LE+ I Y F+ K LLQA HP+++ + YQ
Sbjct: 1192 -NPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLLQAFVHPSFSQHS-GGCYQ 1249
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDA++++++T+YLY + + PG+I+D+RS V N + A AV +HKHL+ DS
Sbjct: 1250 RLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIHKHLIKDS 1309
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
L +++F + N EKD ++E
Sbjct: 1310 NHLTSAISKFEMYVKLSN-------------------------SEKD--------LLEEP 1336
Query: 270 DVPKALGDVFEALV 283
PKALGD+ E+ +
Sbjct: 1337 ACPKALGDIVESCI 1350
>gi|32488296|emb|CAE03362.1| OSJNBb0065L13.5 [Oryza sativa Japonica Group]
gi|116311061|emb|CAH67991.1| OSIGBa0157K09-H0214G12.2 [Oryza sativa Indica Group]
Length = 1604
Score = 116 bits (291), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 125/254 (49%), Gaps = 49/254 (19%)
Query: 30 SSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYG 89
+ S+++L R KV+ADVVESL G +L G + A FL + I +D +
Sbjct: 1093 TRSHHWLHR-----KVIADVVESLIGAFLVEGGFKAAFAFLHWIGI----DVDFN----- 1138
Query: 90 PHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
+P+ R + + L + LE+ I Y F+ K LLQA HP+++ + YQ
Sbjct: 1139 -NPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLLQAFVHPSFSQHS-GGCYQ 1196
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDA++++++T+YLY + + PG+I+D+RS V N + A AV +HKHL+ DS
Sbjct: 1197 RLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIHKHLIKDS 1256
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
L +++F + N EKD ++E
Sbjct: 1257 NHLTSAISKFEMYVKLSN-------------------------SEKD--------LLEEP 1283
Query: 270 DVPKALGDVFEALV 283
PKALGD+ E+ +
Sbjct: 1284 ACPKALGDIVESCI 1297
>gi|157279689|dbj|BAF80150.1| SHOOT ORGANIZATION1 [Oryza sativa Japonica Group]
Length = 1631
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 125/254 (49%), Gaps = 49/254 (19%)
Query: 30 SSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYG 89
+ S+++L R KV+ADVVESL G +L G + A FL + I +D +
Sbjct: 1120 TRSHHWLHR-----KVIADVVESLIGAFLVEGGFKAAFAFLHWIGI----DVDFN----- 1165
Query: 90 PHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
+P+ R + + L + LE+ I Y F+ K LLQA HP+++ + YQ
Sbjct: 1166 -NPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLLQAFVHPSFSQHS-GGCYQ 1223
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDA++++++T+YLY + + PG+I+D+RS V N + A AV +HKHL+ DS
Sbjct: 1224 RLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIHKHLIKDS 1283
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
L +++F + N EKD ++E
Sbjct: 1284 NHLTSAISKFEMYVKLSN-------------------------SEKD--------LLEEP 1310
Query: 270 DVPKALGDVFEALV 283
PKALGD+ E+ +
Sbjct: 1311 ACPKALGDIVESCI 1324
>gi|115459356|ref|NP_001053278.1| Os04g0509300 [Oryza sativa Japonica Group]
gi|113564849|dbj|BAF15192.1| Os04g0509300, partial [Oryza sativa Japonica Group]
Length = 1090
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 125/254 (49%), Gaps = 49/254 (19%)
Query: 30 SSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYG 89
+ S+++L R KV+ADVVESL G +L G + A FL + I +D +
Sbjct: 579 TRSHHWLHR-----KVIADVVESLIGAFLVEGGFKAAFAFLHWIGI----DVDFN----- 624
Query: 90 PHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
+P+ R + + L + LE+ I Y F+ K LLQA HP+++ + YQ
Sbjct: 625 -NPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLLQAFVHPSFSQHS-GGCYQ 682
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDA++++++T+YLY + + PG+I+D+RS V N + A AV +HKHL+ DS
Sbjct: 683 RLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIHKHLIKDS 742
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
L +++F + N EKD ++E
Sbjct: 743 NHLTSAISKFEMYVKLSN-------------------------SEKD--------LLEEP 769
Query: 270 DVPKALGDVFEALV 283
PKALGD+ E+ +
Sbjct: 770 ACPKALGDIVESCI 783
>gi|215694849|dbj|BAG90040.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1058
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 125/254 (49%), Gaps = 49/254 (19%)
Query: 30 SSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYG 89
+ S+++L R KV+ADVVESL G +L G + A FL + I +D +
Sbjct: 547 TRSHHWLHR-----KVIADVVESLIGAFLVEGGFKAAFAFLHWIGI----DVDFN----- 592
Query: 90 PHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
+P+ R + + L + LE+ I Y F+ K LLQA HP+++ + YQ
Sbjct: 593 -NPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLLQAFVHPSFSQHS-GGCYQ 650
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDA++++++T+YLY + + PG+I+D+RS V N + A AV +HKHL+ DS
Sbjct: 651 RLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIHKHLIKDS 710
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
L +++F + N EKD ++E
Sbjct: 711 NHLTSAISKFEMYVKLSN-------------------------SEKD--------LLEEP 737
Query: 270 DVPKALGDVFEALV 283
PKALGD+ E+ +
Sbjct: 738 ACPKALGDIVESCI 751
>gi|414871005|tpg|DAA49562.1| TPA: hypothetical protein ZEAMMB73_299457 [Zea mays]
Length = 1440
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 101/183 (55%), Gaps = 10/183 (5%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID-VHEALYGPHPSAVRCPE 99
+ K V+D VE+L G Y GI A+ ++ I + ++ V +A Y + S
Sbjct: 1122 MCSKTVSDCVEALVGAYYVGGGIAAAIWVMRWFGIDVRCDMELVQKAKYNSNASR----- 1176
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAII 159
+ L I + +LE ++ Y F K LL+A+SHP+ + YQRLEFLGD+++
Sbjct: 1177 ----MCYLSKIKDIEELEAKLKYNFSVKGLLLEAISHPSVQELGVDYCYQRLEFLGDSVL 1232
Query: 160 DFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
D L+T +LY + + PGE++D+RSA V+N FA VR ++H HL H S L E VT +
Sbjct: 1233 DLLITQHLYATHTDVDPGELTDLRSASVSNENFAQAVVRNNIHNHLQHGSGILLEQVTEY 1292
Query: 220 AQN 222
++
Sbjct: 1293 VRS 1295
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
S +RLE LGD+++ +++ L+ + G +SD+RS V N T LHKH +
Sbjct: 1006 SLERLELLGDSVLKYVIGCDLFLRYPMKHEGHLSDMRSKAVCNAT---------LHKHGI 1056
Query: 207 HDSPRLY 213
S + Y
Sbjct: 1057 WQSLQGY 1063
>gi|414871006|tpg|DAA49563.1| TPA: hypothetical protein ZEAMMB73_299457, partial [Zea mays]
Length = 1517
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 101/183 (55%), Gaps = 10/183 (5%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID-VHEALYGPHPSAVRCPE 99
+ K V+D VE+L G Y GI A+ ++ I + ++ V +A Y + S
Sbjct: 1122 MCSKTVSDCVEALVGAYYVGGGIAAAIWVMRWFGIDVRCDMELVQKAKYNSNASR----- 1176
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAII 159
+ L I + +LE ++ Y F K LL+A+SHP+ + YQRLEFLGD+++
Sbjct: 1177 ----MCYLSKIKDIEELEAKLKYNFSVKGLLLEAISHPSVQELGVDYCYQRLEFLGDSVL 1232
Query: 160 DFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
D L+T +LY + + PGE++D+RSA V+N FA VR ++H HL H S L E VT +
Sbjct: 1233 DLLITQHLYATHTDVDPGELTDLRSASVSNENFAQAVVRNNIHNHLQHGSGILLEQVTEY 1292
Query: 220 AQN 222
++
Sbjct: 1293 VRS 1295
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
S +RLE LGD+++ +++ L+ + G +SD+RS V N T LHKH +
Sbjct: 1006 SLERLELLGDSVLKYVIGCDLFLRYPMKHEGHLSDMRSKAVCNAT---------LHKHGI 1056
Query: 207 HDSPRLY 213
S + Y
Sbjct: 1057 WQSLQGY 1063
>gi|330370549|gb|AEC12444.1| ribonuclease III family protein DCL3 [Gossypium hirsutum]
Length = 1655
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 130/244 (53%), Gaps = 20/244 (8%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L K ++D VE+L G Y S G+ A+ ++ L I +++D + +++R
Sbjct: 1199 LCSKTISDCVEALIGAYYLSGGLVAALHVMKWLGI--DAELDPLVVAEVINQASLR---- 1252
Query: 101 ARGLDPLRYIP--ECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAI 158
Y+P E +E ++ Y F K FL +AL+H + + + YQRLEFLGD++
Sbjct: 1253 -------TYVPNYEIHMIESKVGYNFSVKFFLQEALTHESLHE---SYCYQRLEFLGDSV 1302
Query: 159 IDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTR 218
+D L+T YLY + +++ PGE++D+RSA VNN FA AVR DLHKHL H S L ++
Sbjct: 1303 LDLLITQYLYNHHTNIDPGELTDLRSASVNNENFAQVAVRHDLHKHLQHCSTLLSNQISE 1362
Query: 219 FAQN-QEARNHEISDEEEEEEEEEG-IVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALG 276
+ Q+ E+ N D + + G +V ++ ++ + ++ D R+VE + P
Sbjct: 1363 YVQSFTESDNTTRLDPSIKGPKALGDLVESIVGAILIDTNLNLDKVWRIVEPLLSPIVTP 1422
Query: 277 DVFE 280
D E
Sbjct: 1423 DKLE 1426
>gi|414871004|tpg|DAA49561.1| TPA: hypothetical protein ZEAMMB73_299457, partial [Zea mays]
Length = 1199
Score = 116 bits (290), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 65/183 (35%), Positives = 101/183 (55%), Gaps = 10/183 (5%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID-VHEALYGPHPSAVRCPE 99
+ K V+D VE+L G Y GI A+ ++ I + ++ V +A Y + S
Sbjct: 804 MCSKTVSDCVEALVGAYYVGGGIAAAIWVMRWFGIDVRCDMELVQKAKYNSNASR----- 858
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAII 159
+ L I + +LE ++ Y F K LL+A+SHP+ + YQRLEFLGD+++
Sbjct: 859 ----MCYLSKIKDIEELEAKLKYNFSVKGLLLEAISHPSVQELGVDYCYQRLEFLGDSVL 914
Query: 160 DFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
D L+T +LY + + PGE++D+RSA V+N FA VR ++H HL H S L E VT +
Sbjct: 915 DLLITQHLYATHTDVDPGELTDLRSASVSNENFAQAVVRNNIHNHLQHGSGILLEQVTEY 974
Query: 220 AQN 222
++
Sbjct: 975 VRS 977
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 35/67 (52%), Gaps = 9/67 (13%)
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
S +RLE LGD+++ +++ L+ + G +SD+RS V N T LHKH +
Sbjct: 688 SLERLELLGDSVLKYVIGCDLFLRYPMKHEGHLSDMRSKAVCNAT---------LHKHGI 738
Query: 207 HDSPRLY 213
S + Y
Sbjct: 739 WQSLQGY 745
>gi|224141703|ref|XP_002324204.1| dicer-like protein [Populus trichocarpa]
gi|222865638|gb|EEF02769.1| dicer-like protein [Populus trichocarpa]
Length = 1492
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 106/186 (56%), Gaps = 18/186 (9%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+G K ++D VES+ G Y S G+ A+ ++ I +++D PS + +
Sbjct: 1060 MGSKTISDCVESVIGAYYVSGGLIAAIHVMKWFGI--NAELD---------PSLI---SE 1105
Query: 101 ARGLDPLR-YIP---ECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGD 156
A LR YIP E LE ++ YTF K L +A++H + +T YQRLEFLGD
Sbjct: 1106 AITSASLRSYIPKEDEIKSLESKLGYTFGVKFVLQEAMTHASIQEQGVTYCYQRLEFLGD 1165
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENV 216
+++D L+T +LY++ + + PGE++D+RSA VNN FA AV+ +L+ HLLH S L +
Sbjct: 1166 SVLDLLITWHLYQSHTDVDPGELTDLRSASVNNDNFAQVAVKQNLYTHLLHCSTLLQSQI 1225
Query: 217 TRFAQN 222
T + +
Sbjct: 1226 TEYVNS 1231
>gi|357115872|ref|XP_003559709.1| PREDICTED: endoribonuclease Dicer homolog 2a-like [Brachypodium
distachyon]
Length = 1402
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 104/195 (53%), Gaps = 14/195 (7%)
Query: 28 LPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEAL 87
L S+ L +I + K +AD VE+L G YL + G + A LF+ +L + I H +
Sbjct: 1073 LSSNGMYSLRKISIKSKRIADTVEALIGAYLSAAGEQAAFLFINSLGM----DIGFHSEI 1128
Query: 88 YGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTS 147
++ PE+ + L I + Y F+D L++AL+H +Y T
Sbjct: 1129 PIERNIVIK-PEEFINIRSLEII---------LGYNFKDPLLLIEALTHGSYQIAGPTAC 1178
Query: 148 YQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLH 207
YQRLEFLGDA++D LVT Y Y + +P ++D+RSA VNN +A +V+ L+KH+LH
Sbjct: 1179 YQRLEFLGDAVLDHLVTVYYYNTYPECTPALLTDLRSASVNNNCYAHASVKAGLNKHILH 1238
Query: 208 DSPRLYENVTRFAQN 222
S L+ + + +N
Sbjct: 1239 SSTELHRKMAYYLEN 1253
>gi|116788280|gb|ABK24820.1| unknown [Picea sitchensis]
Length = 330
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 125/265 (47%), Gaps = 63/265 (23%)
Query: 26 EKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHE 85
E +P Y + K VADVVE+L G L + G A+ F++ L + ID+ +
Sbjct: 14 ENMPIKGYRMMKT-----KNVADVVEALIGACLETGGETVALSFVKWLGM----DIDIPQ 64
Query: 86 ALYGPHPSAVRCPEQARGLDP-------LRYIPECTQLEKRINYTFQDKSFLLQALSHPT 138
+ P R LD +RY LE + Y+F+ + ++++++H +
Sbjct: 65 EM--PF---------TRKLDTGFVSNVNVRY------LESLLKYSFRVHTLVVESVTHAS 107
Query: 139 YNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVR 198
Y + YQRLEFLGDA++D+L+T Y Y+ + LSPG ++D+RSA VNN +A AV+
Sbjct: 108 YKEPSFSGCYQRLEFLGDAVLDYLITLYFYKTYPGLSPGLLTDLRSAAVNNDCYAQAAVK 167
Query: 199 LDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQ 258
+LH+ L H S L+ +T FA+ LI
Sbjct: 168 CNLHQQLRHASSELHNQITEFAK-----------------------------LISSSSAS 198
Query: 259 TD-VYGRVVEYVDVPKALGDVFEAL 282
D +G V VPK LGD+ E++
Sbjct: 199 GDHFFGWTTTEVAVPKVLGDLIESI 223
>gi|302755618|ref|XP_002961233.1| hypothetical protein SELMODRAFT_74321 [Selaginella moellendorffii]
gi|300172172|gb|EFJ38772.1| hypothetical protein SELMODRAFT_74321 [Selaginella moellendorffii]
Length = 1291
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 68/180 (37%), Positives = 100/180 (55%), Gaps = 13/180 (7%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+ K +D +E+L G Y G +GA+ F++AL Q +D L +
Sbjct: 981 MCSKTTSDALEALIGAYAVGGGFDGALEFMKAL----QVDVDFDSGLIAASQ------HR 1030
Query: 101 ARGLDPLRY-IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAII 159
LD +++ +P LEK + YTFQ+K+ LL+A++H + YQRLEF+GDA++
Sbjct: 1031 PVPLDAVQFHMPALLSLEKELCYTFQNKALLLEAITHAS--TPDTVFCYQRLEFIGDAVL 1088
Query: 160 DFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
DFLVT +L+ + LSPG +SD+RSA VNN A AV+ LH +L H S L +T F
Sbjct: 1089 DFLVTRHLFTSHPGLSPGLLSDLRSASVNNDCLARVAVKHRLHSYLRHGSAELRAKITSF 1148
Score = 43.9 bits (102), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
SY+ LE LGD+++ + VT LY S + GE+SD RS + N T AV DL
Sbjct: 865 SYEGLELLGDSVLKYAVTRKLYLLHSTMHEGELSDRRSHAICNSTLRKLAVAQDL 919
>gi|449532911|ref|XP_004173421.1| PREDICTED: endoribonuclease Dicer homolog 2-like, partial [Cucumis
sativus]
Length = 307
Score = 114 bits (286), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 69/207 (33%), Positives = 111/207 (53%), Gaps = 33/207 (15%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI------LPQSK---IDVHEALYGP 90
K+ K +ADVVE+L G YL + G + AM FL + I +P + +DVH+ +
Sbjct: 113 KIKSKRIADVVEALIGAYLSTGGEKAAMQFLNRIGIEVNFDFVPYERPFRVDVHKLINVG 172
Query: 91 HPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQR 150
H LE + YTF D+S LL+A++H +Y I YQR
Sbjct: 173 H------------------------LESLLKYTFNDRSLLLEAMTHGSYMLPEIPRCYQR 208
Query: 151 LEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSP 210
LEFLGD+++D+ +T +LY + ++P ++D+RSA V+N ++ A++ LHK +LH S
Sbjct: 209 LEFLGDSVLDYAITVHLYNKYPGMTPELLTDMRSASVSNDCYSRTALKAQLHKSILHCSH 268
Query: 211 RLYENVTRFAQNQEARNHEISDEEEEE 237
L+++++ QN E + E + E E
Sbjct: 269 DLHKHISSAVQNFETLSSEATYGWESE 295
>gi|296084589|emb|CBI25610.3| unnamed protein product [Vitis vinifera]
Length = 1623
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 104/179 (58%), Gaps = 11/179 (6%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L K +ADVVE+L G ++ G + A +FL+ + I Q + + + S+ +
Sbjct: 1137 LHKKTIADVVEALVGAFIVDSGFKAATVFLKWIGI--QVDFEAFQVI-NACISSTSYMQL 1193
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
A D +P LEK + + F K LLQA+ HP+YN + YQRLEFLGDA++D
Sbjct: 1194 ASSTD----VP---ALEKLLGHEFLHKGLLLQAIVHPSYNKHG-GGCYQRLEFLGDAVLD 1245
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
+L+T+YLY + L PG+++D+RS VNN +FA+ AV LH+ L+ D+ L E + ++
Sbjct: 1246 YLITSYLYSVYPKLKPGQMTDLRSLSVNNKSFANVAVSRSLHEFLICDASSLSEAIKKY 1304
Score = 43.5 bits (101), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 13/87 (14%)
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKH-- 204
S +RLE LGDA + F V L+ + L GE++ RS +VNN AVR +L +
Sbjct: 1029 SLERLEVLGDAFLKFAVGRRLFLLYDALDEGELTRRRSNVVNNSNLFKLAVRRNLQVYIR 1088
Query: 205 -----------LLHDSPRLYENVTRFA 220
L H PR+ E T A
Sbjct: 1089 DQSFDPGQFFALGHRCPRICEKETEMA 1115
>gi|359484756|ref|XP_002264486.2| PREDICTED: dicer-like protein 4 [Vitis vinifera]
Length = 1622
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 67/179 (37%), Positives = 104/179 (58%), Gaps = 11/179 (6%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L K +ADVVE+L G ++ G + A +FL+ + I Q + + + S+ +
Sbjct: 1136 LHKKTIADVVEALVGAFIVDSGFKAATVFLKWIGI--QVDFEAFQVI-NACISSTSYMQL 1192
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
A D +P LEK + + F K LLQA+ HP+YN + YQRLEFLGDA++D
Sbjct: 1193 ASSTD----VP---ALEKLLGHEFLHKGLLLQAIVHPSYNKHG-GGCYQRLEFLGDAVLD 1244
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
+L+T+YLY + L PG+++D+RS VNN +FA+ AV LH+ L+ D+ L E + ++
Sbjct: 1245 YLITSYLYSVYPKLKPGQMTDLRSLSVNNKSFANVAVSRSLHEFLICDASSLSEAIKKY 1303
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 40/87 (45%), Gaps = 13/87 (14%)
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKH-- 204
S +RLE LGDA + F V L+ + L GE++ RS +VNN AVR +L +
Sbjct: 1028 SLERLEVLGDAFLKFAVGRRLFLLYDALDEGELTRRRSNVVNNSNLFKLAVRRNLQVYIR 1087
Query: 205 -----------LLHDSPRLYENVTRFA 220
L H PR+ E T A
Sbjct: 1088 DQSFDPGQFFALGHRCPRICEKETEMA 1114
>gi|218184775|gb|EEC67202.1| hypothetical protein OsI_34085 [Oryza sativa Indica Group]
Length = 1093
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 116/242 (47%), Gaps = 40/242 (16%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+ K ++D VE+L G Y GI A+ ++ I + + + + +
Sbjct: 665 MCSKTISDCVEALVGAYYVGGGIAAALWVMRWFGIDIKCDMKLLQEV----------KFN 714
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
A L L I + +LE ++ Y F K LL+A++HP+ + YQRLEFLGD+++D
Sbjct: 715 ASHLCSLSKINDIEELEAKLKYNFSVKGLLLEAITHPSLQELGVDYCYQRLEFLGDSVLD 774
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
L+T +LY + + PGE++D+RSA+V+N FA VR ++H HL H S L E +T +
Sbjct: 775 LLLTRHLYATHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGILLEQITEYV 834
Query: 221 QNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFE 280
++ N E +E E FL VPK LGD+ E
Sbjct: 835 RS----NLECQGKESE-------------FLQHTT-------------CKVPKVLGDIME 864
Query: 281 AL 282
++
Sbjct: 865 SI 866
Score = 41.6 bits (96), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 145 TTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKH 204
T S +RLE LGD+++ ++V L+ + G++SD+RS V N T + + L +
Sbjct: 547 TFSLERLELLGDSVLKYVVGCDLFLRYPMKHEGQLSDMRSKAVCNATLHKHGIWRSLQGY 606
Query: 205 LLHDS--PRLY 213
+ ++ PR +
Sbjct: 607 VRDNAFDPRRW 617
>gi|297610684|ref|NP_001064898.2| Os10g0485600 [Oryza sativa Japonica Group]
gi|18087887|gb|AAL59041.1|AC087182_24 putative RNA helicase [Oryza sativa Japonica Group]
gi|31432753|gb|AAP54346.1| Type III restriction enzyme, res subunit family protein, expressed
[Oryza sativa Japonica Group]
gi|255679506|dbj|BAF26812.2| Os10g0485600 [Oryza sativa Japonica Group]
Length = 1458
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 116/242 (47%), Gaps = 40/242 (16%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+ K ++D VE+L G Y GI A+ ++ I + + + + +
Sbjct: 1042 MCSKTISDCVEALVGAYYVGGGIAAALWVMRWFGIDIKCDMKLLQEV----------KFN 1091
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
A L L I + +LE ++ Y F K LL+A++HP+ + YQRLEFLGD+++D
Sbjct: 1092 ASHLCSLSKINDIEELEAKLKYNFSVKGLLLEAITHPSLQELGVDYCYQRLEFLGDSVLD 1151
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
L+T +LY + + PGE++D+RSA+V+N FA VR ++H HL H S L E +T +
Sbjct: 1152 LLLTRHLYATHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGILLEQITEYV 1211
Query: 221 QNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFE 280
++ N E +E E FL VPK LGD+ E
Sbjct: 1212 RS----NLECQGKESE-------------FLQHTT-------------CKVPKVLGDIME 1241
Query: 281 AL 282
++
Sbjct: 1242 SI 1243
Score = 41.6 bits (96), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 145 TTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKH 204
T S +RLE LGD+++ ++V L+ + G++SD+RS V N T + + L +
Sbjct: 924 TFSLERLELLGDSVLKYVVGCDLFLRYPMKHEGQLSDMRSKAVCNATLHKHGIWRSLQGY 983
Query: 205 LLHDS--PRLY 213
+ ++ PR +
Sbjct: 984 VRDNAFDPRRW 994
>gi|222613035|gb|EEE51167.1| hypothetical protein OsJ_31945 [Oryza sativa Japonica Group]
Length = 1570
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 116/242 (47%), Gaps = 40/242 (16%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+ K ++D VE+L G Y GI A+ ++ I + + + + +
Sbjct: 1111 MCSKTISDCVEALVGAYYVGGGIAAALWVMRWFGIDIKCDMKLLQEV----------KFN 1160
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
A L L I + +LE ++ Y F K LL+A++HP+ + YQRLEFLGD+++D
Sbjct: 1161 ASHLCSLSKINDIEELEAKLKYNFSVKGLLLEAITHPSLQELGVDYCYQRLEFLGDSVLD 1220
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
L+T +LY + + PGE++D+RSA+V+N FA VR ++H HL H S L E +T +
Sbjct: 1221 LLLTRHLYATHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGILLEQITEYV 1280
Query: 221 QNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFE 280
++ N E +E E FL VPK LGD+ E
Sbjct: 1281 RS----NLECQGKESE-------------FLQHTT-------------CKVPKVLGDIME 1310
Query: 281 AL 282
++
Sbjct: 1311 SI 1312
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 145 TTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKH 204
T S +RLE LGD+++ ++V L+ + G++SD+RS V N T + + L +
Sbjct: 993 TFSLERLELLGDSVLKYVVGCDLFLRYPMKHEGQLSDMRSKAVCNATLHKHGIWRSLQGY 1052
Query: 205 LLHDS--PRLY 213
+ ++ PR +
Sbjct: 1053 VRDNAFDPRRW 1063
>gi|251764789|sp|Q7XD96.2|DCL3B_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 3b; AltName:
Full=Dicer-like protein 3b; Short=OsDCL3b
Length = 1637
Score = 113 bits (283), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 116/242 (47%), Gaps = 40/242 (16%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+ K ++D VE+L G Y GI A+ ++ I + + + + +
Sbjct: 1179 MCSKTISDCVEALVGAYYVGGGIAAALWVMRWFGIDIKCDMKLLQEV----------KFN 1228
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
A L L I + +LE ++ Y F K LL+A++HP+ + YQRLEFLGD+++D
Sbjct: 1229 ASHLCSLSKINDIEELEAKLKYNFSVKGLLLEAITHPSLQELGVDYCYQRLEFLGDSVLD 1288
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
L+T +LY + + PGE++D+RSA+V+N FA VR ++H HL H S L E +T +
Sbjct: 1289 LLLTRHLYATHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGILLEQITEYV 1348
Query: 221 QNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFE 280
++ N E +E E FL VPK LGD+ E
Sbjct: 1349 RS----NLECQGKESE-------------FLQHTT-------------CKVPKVLGDIME 1378
Query: 281 AL 282
++
Sbjct: 1379 SI 1380
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 145 TTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKH 204
T S +RLE LGD+++ ++V L+ + G++SD+RS V N T + + L +
Sbjct: 1061 TFSLERLELLGDSVLKYVVGCDLFLRYPMKHEGQLSDMRSKAVCNATLHKHGIWRSLQGY 1120
Query: 205 LLHDS--PRLY 213
+ ++ PR +
Sbjct: 1121 VRDNAFDPRRW 1131
>gi|305354766|emb|CBL30926.1| Dicer protein [Echinococcus multilocularis]
Length = 1981
Score = 113 bits (283), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 94/301 (31%), Positives = 140/301 (46%), Gaps = 53/301 (17%)
Query: 14 DPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQAL 73
D T + + PS ++ FL +K VAD VESL G YL G A+ LQ
Sbjct: 1599 DSTNNIASTRIKNQCPSLTHQFLT-----NKSVADCVESLVGCYLTERGERSALKLLQWF 1653
Query: 74 NI--LPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECT-----------QLEKRI 120
I LP + P S + E+ PL + E T +LE+ I
Sbjct: 1654 GIECLPPA------GEMQPAGSPWKLAEE----KPLSKVEEATVERVYRAGRFSKLEEII 1703
Query: 121 NYTFQDKSFLLQALSHPTY----------------NANRITTSYQRLEFLGDAIIDFLVT 164
YTF+++ L++A +H T + I+ Y+RLEFLGDA++D+ VT
Sbjct: 1704 GYTFKNRRLLIEAFTHSTCRDLHGPPSDDDGGFHGSVTSISGGYERLEFLGDAVLDYAVT 1763
Query: 165 AYLY--ENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQN 222
+L+ + + LSPG ++D+RSA+VNNV F + AVR LH L +P L + F ++
Sbjct: 1764 RFLFTTDATARLSPGALTDLRSALVNNVVFGALAVRHGLHAFLRAAAPPLTRTMALFLRH 1823
Query: 223 QEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEAL 282
+H++ + + + C + D R E V+VPKALGDVFE+L
Sbjct: 1824 ----HHDVVRGDLDVLIAPEVNACRENKGATASQAEGD---RANEEVEVPKALGDVFESL 1876
Query: 283 V 283
Sbjct: 1877 A 1877
>gi|302772092|ref|XP_002969464.1| hypothetical protein SELMODRAFT_91347 [Selaginella moellendorffii]
gi|300162940|gb|EFJ29552.1| hypothetical protein SELMODRAFT_91347 [Selaginella moellendorffii]
Length = 1255
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/180 (37%), Positives = 99/180 (55%), Gaps = 13/180 (7%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+ K +D +E+L G Y G +GA+ F++AL Q +D L +
Sbjct: 945 MCSKTTSDALEALIGAYTVGGGFDGALEFMKAL----QVDVDFDSGLIAASQ------HR 994
Query: 101 ARGLDPLRY-IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAII 159
LD +++ +P LEK + YTFQ+K+ LL+A++H + YQRLEF+GDA++
Sbjct: 995 PVPLDAVQFHMPALLSLEKELCYTFQNKALLLEAITHAS--TPDTVFCYQRLEFIGDAVL 1052
Query: 160 DFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
DFLVT +L+ + LSPG +SD+RSA VNN A AV+ LH +L H S L + F
Sbjct: 1053 DFLVTRHLFTSHPGLSPGLLSDLRSASVNNDCLARVAVKHRLHSYLRHGSAELRAKINSF 1112
Score = 43.9 bits (102), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
SY+ LE LGD+++ + VT LY S + GE+SD RS + N T AV DL
Sbjct: 829 SYEGLELLGDSVLKYAVTRKLYLLHSTMHEGELSDRRSHAICNSTLRKLAVAQDL 883
>gi|302794558|ref|XP_002979043.1| hypothetical protein SELMODRAFT_444049 [Selaginella moellendorffii]
gi|300153361|gb|EFJ20000.1| hypothetical protein SELMODRAFT_444049 [Selaginella moellendorffii]
Length = 1686
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 100/179 (55%), Gaps = 11/179 (6%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARG 103
K +ADVVE+L G YL + G AM ++ L+I D+ E G SA + A
Sbjct: 1432 KALADVVEALIGAYLATSGPPSAMELMKQLDI------DI-EFDIGLLASARQASLPAES 1484
Query: 104 LDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLV 163
L+ E LE ++ Y FQ++S L++A++H + YQRLEFLGD ++DFLV
Sbjct: 1485 FQHLQASLE--SLEHKLQYKFQNRSLLVEAITHAS--QPNCLLCYQRLEFLGDGVLDFLV 1540
Query: 164 TAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQN 222
+ +L+E L PG ++D+RSA VNN FA VR LH+HL H S L + +F QN
Sbjct: 1541 SRHLFETHPGLPPGTLTDLRSAAVNNKWFARLVVRHGLHQHLQHGSVELDCEIRKFVQN 1599
>gi|357465903|ref|XP_003603236.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355492284|gb|AES73487.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
Length = 1758
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 117/246 (47%), Gaps = 49/246 (19%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+ K +AD VE+L G Y G+ ++ ++ L I G PS V
Sbjct: 1259 MCSKTIADCVEALIGAYYVGGGLIASLHMMKWLGIDS-----------GLEPSMVDKAIT 1307
Query: 101 ARGLDPLRYIP---ECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
A L Y P E LE +I Y F K L++A +H + + + Y+RLEFLGD+
Sbjct: 1308 AASLHT--YTPKVNEIASLEAKIGYEFSVKGLLVEATTHLSESEHGTGCCYERLEFLGDS 1365
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
++D L+T +L+++ + + PGE++D+RSA VNN FA AVR +LH+HLLH S L +
Sbjct: 1366 VLDLLITWHLFQSHTEIDPGELTDLRSASVNNENFAQAAVRRNLHQHLLHSSGLLQSQIL 1425
Query: 218 RFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGD 277
+A+ IS+ E+ +GI PKALGD
Sbjct: 1426 EYAK-------VISEPEDNAVPLQGI--------------------------KAPKALGD 1452
Query: 278 VFEALV 283
+ E++
Sbjct: 1453 LVESIA 1458
>gi|222629185|gb|EEE61317.1| hypothetical protein OsJ_15421 [Oryza sativa Japonica Group]
Length = 1632
Score = 112 bits (281), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 68/200 (34%), Positives = 109/200 (54%), Gaps = 16/200 (8%)
Query: 30 SSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYG 89
+ S+++L R KV+ADVVESL G +L G + A FL + I +D +
Sbjct: 1114 TRSHHWLHR-----KVIADVVESLIGAFLVEGGFKAAFAFLHWIGI----DVDFN----- 1159
Query: 90 PHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
+P+ R + + L + LE+ I Y F+ K LLQA HP+++ + YQ
Sbjct: 1160 -NPALYRVLDSSSINLSLMDYTDIAGLEELIGYKFKHKGLLLQAFVHPSFSQHS-GGCYQ 1217
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
+ EFLGDA++++++T+YLY + + PG+I+D+RS V N + A AV +HKHL+ DS
Sbjct: 1218 KTEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIHKHLIKDS 1277
Query: 210 PRLYENVTRFAQNQEARNHE 229
L +++F + N E
Sbjct: 1278 NHLTSAISKFEMYVKLSNSE 1297
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 43/135 (31%), Positives = 68/135 (50%), Gaps = 33/135 (24%)
Query: 149 QRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
+RLEFLGDA++++++T+YLY + + PG+I+D+RS V N + A AV +HKHL+ D
Sbjct: 1308 KRLEFLGDAVLEYVITSYLYSTYPDIKPGQITDLRSLAVGNDSLAYAAVEKSIHKHLIKD 1367
Query: 209 SPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEY 268
S L +++F + N EKD ++E
Sbjct: 1368 SNHLTSAISKFEMYVKLSN-------------------------SEKD--------LLEE 1394
Query: 269 VDVPKALGDVFEALV 283
PKALGD+ E+ +
Sbjct: 1395 PACPKALGDIVESCI 1409
>gi|242059623|ref|XP_002458957.1| hypothetical protein SORBIDRAFT_03g043355 [Sorghum bicolor]
gi|241930932|gb|EES04077.1| hypothetical protein SORBIDRAFT_03g043355 [Sorghum bicolor]
Length = 1651
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 66/185 (35%), Positives = 102/185 (55%), Gaps = 17/185 (9%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARG 103
K ++D VE++ G Y G++ A L+ L I + + EAL ++VR
Sbjct: 1184 KTISDCVEAIIGAYYVEGGLKAAFAVLKWLQIETLEEEQIMEALSS---ASVR------- 1233
Query: 104 LDPLRYIPECTQ---LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
Y+P+ LE ++ YTFQ K L++AL+HP+ + T YQRLEFLGDA++D
Sbjct: 1234 ----NYLPKVDVVEFLEAKLGYTFQVKGLLIEALTHPSQQESGATYCYQRLEFLGDAVLD 1289
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
L+T +L+ + GE++D+RSA VNN FA AV+ +LH+ L H S L + +T +
Sbjct: 1290 ILITRHLFLSHKDTDEGELTDLRSASVNNENFAQVAVKHNLHQFLQHSSGFLQDQITEYV 1349
Query: 221 QNQEA 225
+ E
Sbjct: 1350 NSLEG 1354
Score = 38.5 bits (88), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 43/81 (53%), Gaps = 5/81 (6%)
Query: 114 TQLEKRINYTFQDKS--FLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+QL I YT D S +L+A++ + S +RLE LGD+++ + V+A+L+ F
Sbjct: 1034 SQLRSEIAYTDSDISSFVILEAITTLRCCED---FSMERLELLGDSVLKYAVSAHLFMTF 1090
Query: 172 SHLSPGEISDIRSAMVNNVTF 192
+ G++S R + N T
Sbjct: 1091 LNKHEGQLSSRRQETICNATL 1111
>gi|449453061|ref|XP_004144277.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Cucumis sativus]
Length = 1359
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 114/241 (47%), Gaps = 45/241 (18%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVR-CPEQAR 102
K +AD E+L G Y GI A+ ++ L I +DV + +++R CP
Sbjct: 923 KTIADCAEALIGAYYVDGGIIAALHVMKWLGI--DVNLDVALVVDAITSASLRSCPLGDT 980
Query: 103 GLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFL 162
E LE +I Y F K LL+A++H + + YQRLEFLGD+++D L
Sbjct: 981 ---------EIATLESKIGYDFAVKGLLLEAVTHTSDQEIGVNYCYQRLEFLGDSVLDLL 1031
Query: 163 VTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQN 222
+T + Y+N+S + PGE++D+RSA VNN FA AVR +L +HL H S L +T + +
Sbjct: 1032 ITWHYYQNYSDIDPGELTDLRSASVNNENFAQVAVRRNLQQHLQHCSGLLMSQITEYVK- 1090
Query: 223 QEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEAL 282
+L E +D ++G PK LGD+ E++
Sbjct: 1091 ---------------------------YLSESQDTGKPLHGN-----KGPKVLGDMVESI 1118
Query: 283 V 283
Sbjct: 1119 A 1119
Score = 44.3 bits (103), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 114 TQLEKRINYTFQD----KSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+QL K INY S +L+AL+ N S +RLE LGD+++ + V+ +L+
Sbjct: 770 SQLRKEINYHSNSLGISSSLILEALTTLGSCEN---FSLERLELLGDSVLKYAVSCHLFL 826
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
F G++S R ++ N T + + L ++
Sbjct: 827 KFPEKHEGQLSSRRQQVICNATLHALGTKCGLQGYI 862
>gi|115453927|ref|NP_001050564.1| Os03g0583900 [Oryza sativa Japonica Group]
gi|122246906|sp|Q10HL3.1|DCL2A_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 2a; AltName:
Full=Dicer-like protein 2a; Short=OsDCL2a
gi|50399921|gb|AAT76309.1| putative RNA helicase/RNAseIII protein, C-terminus truncated [Oryza
sativa Japonica Group]
gi|108709535|gb|ABF97330.1| Type III restriction enzyme, res subunit family protein, expressed
[Oryza sativa Japonica Group]
gi|113549035|dbj|BAF12478.1| Os03g0583900 [Oryza sativa Japonica Group]
gi|215701504|dbj|BAG92928.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 1410
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 113/215 (52%), Gaps = 26/215 (12%)
Query: 7 LDFDLYQDPTEDGKKVS--SPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIE 64
LD+D D KK+S +P + S ++ + K +AD VE+L G YL + G +
Sbjct: 1077 LDYD-----ERDNKKISFLAPNGMYSQR-----KMSIKSKRIADSVEALIGAYLSTAGEK 1126
Query: 65 GAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTF 124
A L +++L + I+ H + P + +A +R LE + Y F
Sbjct: 1127 AAFLLMKSLGM----NIEFHTEI----PVERKISMKAEEFINVR------SLEGMLGYKF 1172
Query: 125 QDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRS 184
D LL+AL+H +Y + T+ YQRLEFLGDAI+D L T Y Y + +P ++D+RS
Sbjct: 1173 NDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYYSKYPDCTPELLTDLRS 1232
Query: 185 AMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
A VNN +A AV+ L+KH+LH S L+ ++ +
Sbjct: 1233 ASVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYY 1267
>gi|218193216|gb|EEC75643.1| hypothetical protein OsI_12390 [Oryza sativa Indica Group]
Length = 1318
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 113/215 (52%), Gaps = 26/215 (12%)
Query: 7 LDFDLYQDPTEDGKKVS--SPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIE 64
LD+D D KK+S +P + S ++ + K +AD VE+L G YL + G +
Sbjct: 985 LDYD-----ERDNKKISFLAPNGMYSQR-----KMSIKSKRIADSVEALIGAYLSTAGEK 1034
Query: 65 GAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTF 124
A L +++L + I+ H + P + +A +R LE + Y F
Sbjct: 1035 AAFLLMKSLGM----NIEFHTEI----PVERKISMKAEEFINVR------SLEGMLGYKF 1080
Query: 125 QDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRS 184
D LL+AL+H +Y + T+ YQRLEFLGDAI+D L T Y Y + +P ++D+RS
Sbjct: 1081 NDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYYSKYPDCTPELLTDLRS 1140
Query: 185 AMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
A VNN +A AV+ L+KH+LH S L+ ++ +
Sbjct: 1141 ASVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYY 1175
>gi|449489290|ref|XP_004158269.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
3a-like [Cucumis sativus]
Length = 1639
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 114/241 (47%), Gaps = 45/241 (18%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVR-CPEQAR 102
K +AD E+L G Y GI A+ ++ L I +DV + +++R CP
Sbjct: 1193 KTIADCAEALIGAYYVDGGIIAALHVMKWLGI--DVNLDVALVVDAITSASLRSCPLGDT 1250
Query: 103 GLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFL 162
E LE +I Y F K LL+A++H + + YQRLEFLGD+++D L
Sbjct: 1251 ---------EIATLESKIGYDFAVKGLLLEAVTHTSDQEIGVNYCYQRLEFLGDSVLDLL 1301
Query: 163 VTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQN 222
+T + Y+N+S + PGE++D+RSA VNN FA AVR +L +HL H S L +T + +
Sbjct: 1302 ITWHYYQNYSDIDPGELTDLRSASVNNENFAQVAVRRNLQQHLQHCSGLLMSQITEYVK- 1360
Query: 223 QEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEAL 282
+L E +D ++G PK LGD+ E++
Sbjct: 1361 ---------------------------YLSESQDTGKPLHGN-----KGPKVLGDMVESI 1388
Query: 283 V 283
Sbjct: 1389 A 1389
Score = 44.3 bits (103), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 47/96 (48%), Gaps = 7/96 (7%)
Query: 114 TQLEKRINYTFQD----KSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+QL K INY S +L+AL+ N S +RLE LGD+++ + V+ +L+
Sbjct: 1040 SQLRKEINYHSNSLGISSSLILEALTTLGSCEN---FSLERLELLGDSVLKYAVSCHLFL 1096
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
F G++S R ++ N T + + L ++
Sbjct: 1097 KFPEKHEGQLSSRRQQVICNATLHALGTKCGLQGYI 1132
>gi|41469333|gb|AAS07189.1| putative ribonuclease III, 5'-partial (with alternative splicing)
[Oryza sativa Japonica Group]
Length = 1017
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 113/215 (52%), Gaps = 26/215 (12%)
Query: 7 LDFDLYQDPTEDGKKVS--SPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIE 64
LD+D D KK+S +P + S ++ + K +AD VE+L G YL + G +
Sbjct: 684 LDYD-----ERDNKKISFLAPNGMYSQR-----KMSIKSKRIADSVEALIGAYLSTAGEK 733
Query: 65 GAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTF 124
A L +++L + I+ H + P + +A +R LE + Y F
Sbjct: 734 AAFLLMKSLGM----NIEFHTEI----PVERKISMKAEEFINVR------SLEGMLGYKF 779
Query: 125 QDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRS 184
D LL+AL+H +Y + T+ YQRLEFLGDAI+D L T Y Y + +P ++D+RS
Sbjct: 780 NDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDAILDHLFTEYYYSKYPDCTPELLTDLRS 839
Query: 185 AMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
A VNN +A AV+ L+KH+LH S L+ ++ +
Sbjct: 840 ASVNNNCYAHAAVKSGLNKHILHSSSELHRKMSYY 874
>gi|357140713|ref|XP_003571908.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog
3b-like [Brachypodium distachyon]
Length = 1414
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 65/193 (33%), Positives = 101/193 (52%), Gaps = 17/193 (8%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+ K ++D VE+L G Y GI A+ ++ I +I L E
Sbjct: 1020 MCSKTISDCVEALVGAYYVGGGIIAALWVMRWFGI----EIKCDRKLV---------QEV 1066
Query: 101 ARGLDPLRYIPECT---QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
+ Y+P+ +LE ++ Y F K LL+A++HP+ + + YQRLEFLGD
Sbjct: 1067 KLNASYICYLPKTNDIDELEVKLKYNFSVKGLLLEAITHPSAQESGVDYCYQRLEFLGDC 1126
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
++D L+T YLY + + PGE++D+RSA+V+N FA VR ++H HL H S L E +T
Sbjct: 1127 VLDLLITQYLYVTHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGVLLEQIT 1186
Query: 218 RFAQ-NQEARNHE 229
+ + N E + E
Sbjct: 1187 EYVRFNLECQGKE 1199
>gi|302819693|ref|XP_002991516.1| hypothetical protein SELMODRAFT_448444 [Selaginella moellendorffii]
gi|300140718|gb|EFJ07438.1| hypothetical protein SELMODRAFT_448444 [Selaginella moellendorffii]
Length = 1719
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 70/179 (39%), Positives = 99/179 (55%), Gaps = 11/179 (6%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARG 103
K +ADVVE+L G YL + G AM ++ L I D+ E G SA + A
Sbjct: 1401 KALADVVEALIGAYLATSGPPSAMELMKQLGI------DI-EFDIGLLASARQASLPAES 1453
Query: 104 LDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLV 163
L+ E LE ++ Y FQ++S L++A++H + YQRLEFLGD ++DFLV
Sbjct: 1454 FQHLQASLE--SLEHKLQYKFQNRSLLVEAITHAS--QPNCLLCYQRLEFLGDGVLDFLV 1509
Query: 164 TAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQN 222
+ +L+E L PG ++D+RSA VNN FA +R LH+HL H S L + +F QN
Sbjct: 1510 SRHLFETHPGLPPGTLTDLRSAAVNNKWFARLVLRHGLHQHLQHGSVELDCEIRKFVQN 1568
>gi|391348645|ref|XP_003748555.1| PREDICTED: endoribonuclease Dicer-like [Metaseiulus occidentalis]
Length = 1461
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 63/191 (32%), Positives = 104/191 (54%), Gaps = 22/191 (11%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQAL----------NILPQSKIDVHEALYGPHPS 93
K+ DVVE++ GVYL CG GA+ F + + N L K+D A P
Sbjct: 1265 KIGGDVVEAMAGVYLEKCGPVGALRFFKWIGKDFGDTETNNFLDAFKLDFSAAQKVP--- 1321
Query: 94 AVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEF 153
PEQ R +Y ++E+++ Y F+ + LQA++H + + +T +L F
Sbjct: 1322 ----PEQMR-----QYSHLIDKVERQVGYKFKSRGLALQAITHHSCREHLLTDDMDKLAF 1372
Query: 154 LGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLY 213
+G+A+ID+L+T Y+Y + L+PG+++D+RSA++N A VR +LH LLH S +L+
Sbjct: 1373 VGEAVIDYLLTLYIYGLSTSLNPGQLTDLRSALINKQVTAYAVVRAELHTVLLHTSNKLF 1432
Query: 214 ENVTRFAQNQE 224
+ ++ N E
Sbjct: 1433 SAIKKYLSNFE 1443
>gi|449432976|ref|XP_004134274.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Cucumis sativus]
Length = 1986
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 116/214 (54%), Gaps = 16/214 (7%)
Query: 8 DFDLYQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAM 67
+ DL+ D EDG+ + SSSY L K +ADVVE+L GVY G A
Sbjct: 1557 EMDLHLDVFEDGEVEDREVESDSSSYRVLS-----SKTLADVVEALIGVYYVEGGKTAAN 1611
Query: 68 LFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
++ + I + + D E G S + PE LR + + LE +N FQD+
Sbjct: 1612 HLMKWIGI--KVEFDAGEVECGTRQSNL--PESI-----LRSV-DFDALEGALNIKFQDR 1661
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
L++A++H + + ++ YQRLEF+GDA++D L+T +L+ ++ L PG ++D+R+A V
Sbjct: 1662 GLLVEAITHASRPSCGVSC-YQRLEFVGDAVLDHLITRHLFFTYTDLPPGRLTDLRAAAV 1720
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQ 221
NN FA AV+ +LH HL H S L + + F +
Sbjct: 1721 NNENFARVAVKHNLHIHLRHGSSALEKQIRDFVK 1754
Score = 48.1 bits (113), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 92/185 (49%), Gaps = 30/185 (16%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
QL+ INY S +L+AL T + + T Y+R E LGDA + ++V+ +L+ +
Sbjct: 1428 QLKHMINYPVP-ASKILEAL---TAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPRK 1483
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD--SPRLYENVTRFAQ-------NQEA 225
G+++ +R MV+N+ YA+ L ++ D +P +R+A +++
Sbjct: 1484 HEGQLTRMRQQMVSNMVLYQYALSKKLQSYIQADRFAP------SRWAAPGVLPVYDEDM 1537
Query: 226 RNHEISDEEEEEEEEEGIVRCLIFF------LIEEKDVQTDVYG-RVVEYVDVPKALGDV 278
++ E S ++++ +G+ + +E+++V++D RV+ K L DV
Sbjct: 1538 KDGESSFFDQDKSNSDGVSEMDLHLDVFEDGEVEDREVESDSSSYRVLS----SKTLADV 1593
Query: 279 FEALV 283
EAL+
Sbjct: 1594 VEALI 1598
>gi|449478272|ref|XP_004155270.1| PREDICTED: LOW QUALITY PROTEIN: endoribonuclease Dicer homolog 1-like
[Cucumis sativus]
Length = 1987
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 75/214 (35%), Positives = 116/214 (54%), Gaps = 16/214 (7%)
Query: 8 DFDLYQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAM 67
+ DL+ D EDG+ + SSSY L K +ADVVE+L GVY G A
Sbjct: 1558 EMDLHLDVFEDGEVEDREVESDSSSYRVLS-----SKTLADVVEALIGVYYVEGGKTAAN 1612
Query: 68 LFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
++ + I + + D E G S + PE LR + + LE +N FQD+
Sbjct: 1613 HLMKWIGI--KVEFDAGEVECGTRQSNL--PESI-----LRSV-DFDALEGALNIKFQDR 1662
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
L++A++H + + ++ YQRLEF+GDA++D L+T +L+ ++ L PG ++D+R+A V
Sbjct: 1663 GLLVEAITHASRPSCGVSC-YQRLEFVGDAVLDHLITRHLFFTYTDLPPGRLTDLRAAAV 1721
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQ 221
NN FA AV+ +LH HL H S L + + F +
Sbjct: 1722 NNENFARVAVKHNLHIHLRHGSSALEKQIRDFVK 1755
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/185 (25%), Positives = 92/185 (49%), Gaps = 30/185 (16%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
QL+ INY S +L+AL T + + T Y+R E LGDA + ++V+ +L+ +
Sbjct: 1429 QLKHMINYPVP-ASKILEAL---TAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPRK 1484
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD--SPRLYENVTRFAQ-------NQEA 225
G+++ +R MV+N+ YA+ L ++ D +P +R+A +++
Sbjct: 1485 HEGQLTRMRQQMVSNMVLYQYALSKKLQSYIQADRFAP------SRWAAPGVLPVYDEDM 1538
Query: 226 RNHEISDEEEEEEEEEGIVRCLIFF------LIEEKDVQTDVYG-RVVEYVDVPKALGDV 278
++ E S ++++ +G+ + +E+++V++D RV+ K L DV
Sbjct: 1539 KDGESSFFDQDKSNSDGVSEMDLHLDVFEDGEVEDREVESDSSSYRVLS----SKTLADV 1594
Query: 279 FEALV 283
EAL+
Sbjct: 1595 VEALI 1599
>gi|78099743|gb|ABB20894.1| dicer-like protein [Oryza sativa Indica Group]
Length = 1116
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 115/243 (47%), Gaps = 40/243 (16%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+ K ++D VE+L G Y GI A+ ++ I + + + + +
Sbjct: 659 MCSKTISDCVEALVGAYYVGGGIAAALWVMRWFGIDIKCDMKLLQEV----------KFN 708
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
A L L I + +LE ++ Y F K LL+A++HP+ + YQRLEFLGD+++D
Sbjct: 709 ASHLCSLSKINDIEELEAKLKYNFSVKGLLLEAITHPSLQELGVDYCYQRLEFLGDSVLD 768
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
L+T +LY + + PGE++D+RSA+V+N FA VR ++H HL H S L +T +
Sbjct: 769 LLLTRHLYATHTDVDPGELTDLRSALVSNENFAQAVVRNNIHSHLQHGSGILLGQITEYV 828
Query: 221 QNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFE 280
++ N E +E E FL VPK LGD+ E
Sbjct: 829 RS----NLECQGKESE-------------FLQHTT-------------CKVPKVLGDIME 858
Query: 281 ALV 283
++
Sbjct: 859 SIA 861
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 145 TTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKH 204
T S +RLE LGD+++ ++V L+ + G++SD+RS V N T + + L +
Sbjct: 541 TFSLERLELLGDSVLKYVVGCDLFLRYPMKHEGQLSDMRSKAVCNATLHKHGIWRSLQGY 600
Query: 205 LLHDS--PRLY 213
+ ++ PR +
Sbjct: 601 VRDNAFDPRRW 611
>gi|302793023|ref|XP_002978277.1| hypothetical protein SELMODRAFT_108314 [Selaginella moellendorffii]
gi|300154298|gb|EFJ20934.1| hypothetical protein SELMODRAFT_108314 [Selaginella moellendorffii]
Length = 1728
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 71/193 (36%), Positives = 101/193 (52%), Gaps = 16/193 (8%)
Query: 30 SSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYG 89
SSSY L K +ADVVE+L GVY G + A F+ +NI ID EA
Sbjct: 1316 SSSYRVLS-----SKTLADVVEALIGVYYVEGGTKAAAHFMNWINI----PIDYDEAEAN 1366
Query: 90 PHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
+ P D + + +LE I Y FQ KS L++A+SH + + + YQ
Sbjct: 1367 AARAGCSVP------DSVMNSIDFEKLELAIGYKFQMKSVLVEAISHASRPSAGVPC-YQ 1419
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEF+GDA++D L+T YL+ + L PG ++D+R+A VNN FA +V+ H HL H S
Sbjct: 1420 RLEFVGDAVLDHLITRYLFFRYQDLPPGRLTDLRAAAVNNENFARISVKHSFHLHLRHGS 1479
Query: 210 PRLYENVTRFAQN 222
L + F ++
Sbjct: 1480 SALEAQIKDFVKD 1492
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 145 TTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKH 204
T SY+R E LGDA + ++V+ L+ G+++ +R V+N+ +A+ L +
Sbjct: 1186 TFSYERAELLGDAYLKWVVSRRLFIKHPRKHEGQLTRMRQQTVSNMVLYEFAISKSLQSY 1245
Query: 205 LLHD 208
+ D
Sbjct: 1246 IQSD 1249
>gi|251764794|sp|Q69LX2.2|DCL2B_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 2b; AltName:
Full=Dicer-like protein 2b; Short=OsDCL2b
Length = 1377
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 100/182 (54%), Gaps = 14/182 (7%)
Query: 38 RIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRC 97
++ + K +AD VE+L G YL + G + A L +++L + I+ H + P +
Sbjct: 1071 KMSIKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGM----NIEFHTEI----PVERKI 1122
Query: 98 PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
+A +R LE + Y F D LL+AL+H +Y + T+ YQRLEFLGDA
Sbjct: 1123 SMKAEEFIDVR------SLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDA 1176
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
I+D L T Y Y + +P ++D+RSA VNN +A AV+ L+KH+LH S L+ ++
Sbjct: 1177 ILDHLFTEYYYSKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMS 1236
Query: 218 RF 219
+
Sbjct: 1237 YY 1238
>gi|50726394|dbj|BAD34005.1| CAF protein-like [Oryza sativa Japonica Group]
gi|51091635|dbj|BAD36404.1| CAF protein-like [Oryza sativa Japonica Group]
Length = 1375
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 100/182 (54%), Gaps = 14/182 (7%)
Query: 38 RIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRC 97
++ + K +AD VE+L G YL + G + A L +++L + I+ H + P +
Sbjct: 1069 KMSIKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGM----NIEFHTEI----PVERKI 1120
Query: 98 PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
+A +R LE + Y F D LL+AL+H +Y + T+ YQRLEFLGDA
Sbjct: 1121 SMKAEEFIDVR------SLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDA 1174
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
I+D L T Y Y + +P ++D+RSA VNN +A AV+ L+KH+LH S L+ ++
Sbjct: 1175 ILDHLFTEYYYSKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMS 1234
Query: 218 RF 219
+
Sbjct: 1235 YY 1236
>gi|222625282|gb|EEE59414.1| hypothetical protein OsJ_11564 [Oryza sativa Japonica Group]
Length = 1371
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 100/182 (54%), Gaps = 14/182 (7%)
Query: 38 RIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRC 97
++ + K +AD VE+L G YL + G + A L +++L + I+ H + P +
Sbjct: 1065 KMSIKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGM----NIEFHTEI----PVERKI 1116
Query: 98 PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
+A +R LE + Y F D LL+AL+H +Y + T+ YQRLEFLGDA
Sbjct: 1117 SMKAEEFINVR------SLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDA 1170
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
I+D L T Y Y + +P ++D+RSA VNN +A AV+ L+KH+LH S L+ ++
Sbjct: 1171 ILDHLFTEYYYSKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSSSELHRKMS 1230
Query: 218 RF 219
+
Sbjct: 1231 YY 1232
>gi|356546104|ref|XP_003541471.1| PREDICTED: dicer-like protein 4-like [Glycine max]
Length = 1636
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 71/196 (36%), Positives = 101/196 (51%), Gaps = 28/196 (14%)
Query: 30 SSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI---LPQSK---IDV 83
S ++++L R K +ADVVE+L G +L G + A+ FL + I S+ I +
Sbjct: 1140 SKNHHWLHR-----KTIADVVEALVGAFLVDSGFKAAIAFLSWIGIQVDFEASQVVDICI 1194
Query: 84 HEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANR 143
A Y P S V P LE ++ + F K LLQA HP+YN
Sbjct: 1195 ASASYSPLSSEVDIP----------------SLEGKLGHHFFHKGLLLQAFVHPSYN-KL 1237
Query: 144 ITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHK 203
YQRLEFLGDA++D+L+T+YL+ + L PG+++D+RS VNN FA AV
Sbjct: 1238 GGGCYQRLEFLGDAVLDYLITSYLFSAYPKLKPGQLTDLRSLSVNNKAFACLAVDRSFDN 1297
Query: 204 HLLHDSPRLYENVTRF 219
LL DS L E + ++
Sbjct: 1298 FLLCDSSGLSEAIKKY 1313
Score = 37.4 bits (85), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%)
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
S +RLE LGDA + F V + + L G+++ RS VNN A++ +L ++
Sbjct: 1034 SLERLEVLGDAFLKFAVARHFFLMHDSLHEGDLTKRRSNAVNNSNLFKLAIKRNLQVYI 1092
>gi|356571277|ref|XP_003553805.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Glycine max]
Length = 1942
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 115/214 (53%), Gaps = 25/214 (11%)
Query: 10 DLYQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLF 69
D Y+D EDG+ S SSSY L K +ADVVE+L GVY G A
Sbjct: 1522 DGYEDEMEDGELESD-----SSSYRVLS-----SKTLADVVEALIGVYYVEGGKNAANHL 1571
Query: 70 LQALNILPQSKIDVHEALYGPH--PSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
++ + I + D + P P ++ LR + + LE +N F+D+
Sbjct: 1572 MKWMGIQIEFDPDTMDCTRKPFNVPDSI-----------LRSV-DFDALEGALNMKFKDR 1619
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
L+++++H + ++ ++ YQRLEF+GDA++D L+T +L+ +++L PG ++D+R+A V
Sbjct: 1620 GLLVESITHASRPSSGVSC-YQRLEFVGDAVLDHLITRHLFFTYTNLPPGRLTDLRAAAV 1678
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQ 221
NN FA AV+ +LH HL H S L + + F +
Sbjct: 1679 NNENFARVAVKHNLHVHLRHGSSALEKQIKEFVK 1712
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/182 (28%), Positives = 83/182 (45%), Gaps = 26/182 (14%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
QL+ INY Q S +L+AL T + + T Y+R E LGDA + ++V+ +L+ +
Sbjct: 1388 QLKNMINYPVQ-ASKILEAL---TAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQK 1443
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNH--EISD 232
G+++ +R MV+N+ YA+ L ++ D RFA ++ A + D
Sbjct: 1444 HEGQLTRMRQQMVSNMVLYQYALSKGLQSYIQAD---------RFAPSRWAAPGVLPVFD 1494
Query: 233 EEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVE-----------YVDVPKALGDVFEA 281
E+ ++ E + IE D TD Y +E V K L DV EA
Sbjct: 1495 EDTKDGESSLFDQERSISKIERMDCHTDGYEDEMEDGELESDSSSYRVLSSKTLADVVEA 1554
Query: 282 LV 283
L+
Sbjct: 1555 LI 1556
>gi|356518185|ref|XP_003527762.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Glycine max]
Length = 455
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/243 (31%), Positives = 116/243 (47%), Gaps = 51/243 (20%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQALNI---LPQSKIDVHEALYGPHPSAVRCPEQ 100
K +AD VE+L G Y G+ ++ ++ L I L S +D EA+ S E
Sbjct: 126 KTIADCVEALIGAYYVDGGLFASLNVMKWLGIGVELELSSLD--EAITAASLSTCVPIES 183
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
+ LEK+I Y F K LL+A++H + I Y+RL+FLGD+++D
Sbjct: 184 -----------DIASLEKKIEYEFSVKGLLLEAITHLSEKELGIGCCYERLKFLGDSVLD 232
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
L+T +LY++ + + PG ++D+RSA VNN FA AVR +LH+HLLH S L + +
Sbjct: 233 LLITWHLYQSHTDIDPGVLADLRSASVNNDNFAQVAVRHNLHQHLLHSSGLLVSQILEYV 292
Query: 221 QNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFE 280
+ +I E D R + + PKALGDV E
Sbjct: 293 K-----------------------------VISESD------PRSLPSIRAPKALGDVVE 317
Query: 281 ALV 283
++V
Sbjct: 318 SIV 320
>gi|255565079|ref|XP_002523532.1| Ribonuclease III, putative [Ricinus communis]
gi|223537239|gb|EEF38871.1| Ribonuclease III, putative [Ricinus communis]
Length = 1633
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 62/179 (34%), Positives = 100/179 (55%), Gaps = 11/179 (6%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L K +ADVVE+L G ++ G A FL+ L I ++++ + +
Sbjct: 1145 LYKKTIADVVEALVGAFIVDSGFRAATAFLKWLGI----RVNIEAS------DVTKVCLA 1194
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
+R PL + + LE +++ F ++ +LQA HP+YN + YQRLEFLGDA++D
Sbjct: 1195 SRTFMPLAPSIDVSSLEDSLDHQFVNRGLVLQAFVHPSYNKHG-GGCYQRLEFLGDAVLD 1253
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
+L+T+YL+ + L PG ++D+RSA+VNN FA AV ++ L+ DS L E + +
Sbjct: 1254 YLITSYLFSVYPKLKPGLLTDLRSALVNNRAFAIVAVDRSFNEFLICDSGNLSEAIETY 1312
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
S +RLE LGDA + F V +L+ L GE++ RS VNN A R +L + +
Sbjct: 1032 SLERLEILGDAFLKFAVGRHLFLLHDTLDEGELTRKRSNAVNNSNLLKLASRRNLQVY-I 1090
Query: 207 HDSP 210
D P
Sbjct: 1091 RDQP 1094
>gi|356565129|ref|XP_003550797.1| PREDICTED: dicer-like protein 4-like [Glycine max]
Length = 1636
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 69/185 (37%), Positives = 96/185 (51%), Gaps = 23/185 (12%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI---LPQSK---IDVHEALYGPHPSA 94
L K +ADVVE+L G +L G + A+ FL + I S+ I + A Y P S
Sbjct: 1148 LHRKTIADVVEALVGAFLVDSGFKAAIAFLSWIGIQVDFEASQVVDICIASASYLPLSSE 1207
Query: 95 VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFL 154
V P LE ++ + F K LLQA HP+YN YQRLEFL
Sbjct: 1208 VDIP----------------SLEGKLGHHFFHKGLLLQAFVHPSYN-KLGGGCYQRLEFL 1250
Query: 155 GDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYE 214
GDA++D+L+T+Y++ + L PG+++D+RS VNN FA AV K LL DS L E
Sbjct: 1251 GDAVLDYLITSYVFSAYPKLKPGQLTDLRSLSVNNKAFACLAVDRSFDKFLLCDSSGLSE 1310
Query: 215 NVTRF 219
+ ++
Sbjct: 1311 AIKKY 1315
Score = 38.5 bits (88), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 115 QLEKRINYTFQDKSFL--LQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
+L+ R++ +F + + + L+ L T + S +RLE LGDA + F V + +
Sbjct: 1002 ELKHRLSSSFPEAAEISALRVLEALTTEKCQERFSLERLEVLGDAFLKFAVARHFFLMHD 1061
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS-------------PRLYENVTR 218
L G+++ RS VNN A++ +L ++ + PRL N T+
Sbjct: 1062 SLHEGDLTKRRSNAVNNSNLFKLAIKRNLQVYICDQTFDPTQFYALGRPCPRLCSNETK 1120
>gi|297812215|ref|XP_002873991.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297319828|gb|EFH50250.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 1693
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 66/191 (34%), Positives = 101/191 (52%), Gaps = 23/191 (12%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI-LPQSKIDVHEALYGPHPSAVRCPE 99
L K +ADVVE+L G +L G +GA+ FL + + + + V +A
Sbjct: 1222 LYKKTIADVVEALVGAFLVDSGFKGAVKFLSWIGVNVDFESLQVQDACIASR-------- 1273
Query: 100 QARGLDPLRYIPECTQ-----LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFL 154
RY+P T+ LE +++Y F K L+QA HP+YN + YQRLEFL
Sbjct: 1274 --------RYMPLTTRNNLEALENQLDYNFLHKGLLVQAFIHPSYNRHG-GGCYQRLEFL 1324
Query: 155 GDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYE 214
GDA++D+L+T+Y + F L PG+++D+RS VNN A+ AV L + L +S L+E
Sbjct: 1325 GDAVLDYLMTSYFFTVFPKLKPGQLTDLRSLSVNNKALANVAVSFSLKRFLFCESVYLHE 1384
Query: 215 NVTRFAQNQEA 225
+ + + A
Sbjct: 1385 AIEDYTNFRAA 1395
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
S +RLE LGDA + F V+ +L+ + L GE++ RS VNN A++ +L ++
Sbjct: 1110 SLERLEVLGDAFLKFAVSRHLFLHHDRLDEGELTRRRSKAVNNSNLCRLAIKRNLQVYI 1168
>gi|379987676|gb|AFD22618.1| dicer-like 1 protein, partial [Nicotiana attenuata]
Length = 1690
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/179 (36%), Positives = 103/179 (57%), Gaps = 11/179 (6%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L K +ADVVE+L GVY G A F++ + + + D E Y P ++ PE
Sbjct: 1289 LSSKTMADVVEALIGVYYVDGGKYAANHFMKWIGV--EVDFDFKETEYSIRPYSI--PEN 1344
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
LR + + +L+ +N +F DK LL+A++H + ++ ++ YQRLEF+GDA++D
Sbjct: 1345 V-----LRSV-DFDKLQGALNISFNDKGLLLEAITHASRPSSGVSC-YQRLEFVGDAVLD 1397
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
L+T +L+ ++ L PG ++D+R+A VNN FA AV+ LH HL H S L + + F
Sbjct: 1398 HLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHGLHLHLRHGSSALEKQIRDF 1456
Score = 47.0 bits (110), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 55/111 (49%), Gaps = 9/111 (8%)
Query: 131 LQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNV 190
L+ L T + + T Y+R E LGDA + ++V+ YL+ + G+++ +R MV+N+
Sbjct: 1144 LKILEALTAASCQETFCYERAELLGDAYLKWVVSRYLFLKYPQKHEGQLTRMRQQMVSNM 1203
Query: 191 TFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEE 241
YA+ L ++ D RF+ ++ A + +E+ EEE
Sbjct: 1204 VLYQYALNKGLQSYIQAD---------RFSPSRWAAPGVLPVYDEDTNEEE 1245
>gi|357167959|ref|XP_003581414.1| PREDICTED: endoribonuclease Dicer homolog 4-like [Brachypodium
distachyon]
Length = 1627
Score = 109 bits (273), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 103/180 (57%), Gaps = 13/180 (7%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHE-ALYGPHPSAVRCPE 99
L K +ADVVESL G +L G + A FL + I +D + ALY R
Sbjct: 1116 LHKKTIADVVESLLGAFLVEGGFKAAFAFLHWVGI----DVDFEDSALY-------RVLN 1164
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAII 159
+ L + +LE+ I Y F+ K +++A HP++N + YQ+LEFLGDA++
Sbjct: 1165 ASSINLSLMNLINVAELEELIGYKFKHKGLIIEAFVHPSFNKHS-GGCYQKLEFLGDAVL 1223
Query: 160 DFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
++L+T+YLY + L PGEI+D++S V N +FA A++ +HK+++ DS L + V++F
Sbjct: 1224 EYLMTSYLYSAYPDLKPGEITDLKSLAVCNDSFAYVAIQKCIHKYIIKDSNHLTKAVSKF 1283
>gi|356504203|ref|XP_003520888.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Glycine max]
Length = 1944
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 113/212 (53%), Gaps = 25/212 (11%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQ 71
Y+D EDG+ S SSSY L K +ADVVE+L GVY G A ++
Sbjct: 1526 YEDEMEDGELESD-----SSSYRVLS-----SKTLADVVEALIGVYYVEGGKNAANHLMK 1575
Query: 72 ALNILPQSKIDVHEALYGPH--PSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSF 129
+ I + D E P P ++ LR + + LE +N F D+
Sbjct: 1576 WIGIQIEFDPDTMECTKKPFNVPDSI-----------LRSV-DFDALEGALNMKFNDRGL 1623
Query: 130 LLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
L+++++H + ++ ++ YQRLEF+GDA++D L+T +L+ +++L PG ++D+R+A VNN
Sbjct: 1624 LVESITHASRPSSGVSC-YQRLEFVGDAVLDHLITRHLFFTYTNLPPGRLTDLRAAAVNN 1682
Query: 190 VTFASYAVRLDLHKHLLHDSPRLYENVTRFAQ 221
FA AV+ +LH HL H S L + + F +
Sbjct: 1683 ENFARVAVKHNLHVHLRHGSSALEKQIKEFVK 1714
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 81/182 (44%), Gaps = 26/182 (14%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
QL+ INY S +L AL T + + T Y+R E LGDA + ++V+ +L+ +
Sbjct: 1390 QLKNMINYPVL-ASKILGAL---TAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQK 1445
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNH--EISD 232
G+++ +R MV+N+ YA+ L ++ D RFA ++ A + D
Sbjct: 1446 HEGQLTRMRQQMVSNMVLYQYALSKGLQSYIQAD---------RFAPSRWAAPGVLPVFD 1496
Query: 233 EEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVE-----------YVDVPKALGDVFEA 281
E+ ++ E + IE D T+ Y +E V K L DV EA
Sbjct: 1497 EDTKDGESSLFDQERSISKIERMDCHTNGYEDEMEDGELESDSSSYRVLSSKTLADVVEA 1556
Query: 282 LV 283
L+
Sbjct: 1557 LI 1558
>gi|302765743|ref|XP_002966292.1| hypothetical protein SELMODRAFT_86110 [Selaginella moellendorffii]
gi|300165712|gb|EFJ32319.1| hypothetical protein SELMODRAFT_86110 [Selaginella moellendorffii]
Length = 1730
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 70/193 (36%), Positives = 101/193 (52%), Gaps = 16/193 (8%)
Query: 30 SSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYG 89
SSSY L K +ADVVE+L GVY G + A F+ ++I ID EA
Sbjct: 1316 SSSYRVLS-----SKTLADVVEALIGVYYVEGGTKAAAHFMNWISI----PIDYDEAEAN 1366
Query: 90 PHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
+ P D + + +LE I Y FQ KS L++A+SH + + + YQ
Sbjct: 1367 AARAGCSVP------DSVMNSIDFEKLELAIGYKFQMKSVLVEAISHASRPSAGVPC-YQ 1419
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEF+GDA++D L+T YL+ + L PG ++D+R+A VNN FA +V+ H HL H S
Sbjct: 1420 RLEFVGDAVLDHLITRYLFFRYQDLPPGRLTDLRAAAVNNENFARISVKHSFHLHLRHGS 1479
Query: 210 PRLYENVTRFAQN 222
L + F ++
Sbjct: 1480 SALEAQIKDFVKD 1492
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 34/64 (53%)
Query: 145 TTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKH 204
T SY+R E LGDA + ++V+ L+ G+++ +R V+N+ +A+ L +
Sbjct: 1186 TFSYERAELLGDAYLKWVVSRRLFIKHPRKHEGQLTRMRQQTVSNMVLYEFAISKSLQSY 1245
Query: 205 LLHD 208
+ D
Sbjct: 1246 IQSD 1249
>gi|393215463|gb|EJD00954.1| ribonuclease III [Fomitiporia mediterranea MF3/22]
Length = 1411
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 86/249 (34%), Positives = 125/249 (50%), Gaps = 43/249 (17%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDV-----HEALYGPHPSAV 95
LGDK VADV E++ G + G E A+ +ALN+ P ID +AL P
Sbjct: 1049 LGDKAVADVAEAIIGAAYVTGGREIALKVTKALNV-PVPHIDRWSDFGRKALAPPPEVTA 1107
Query: 96 RCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLG 155
R LR +E I + F L QAL+H + + N +T SY+RLEF+G
Sbjct: 1108 R----------LR-TGSIQAVEAIIGHQFNHPHLLAQALTHASIHGNEMT-SYERLEFIG 1155
Query: 156 DAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYEN 215
DAI+DFLV ++Y+ S LSPG ++ ++ AMV+N A+ V LH+HLL +S L ++
Sbjct: 1156 DAILDFLVIRHIYDRDSSLSPGALTLLKGAMVSNAALAAVCVWSGLHEHLLFESSALEKS 1215
Query: 216 VTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDV--PK 273
+ +A E R ++++ E+ E D Q Y +VDV PK
Sbjct: 1216 IQSYAVELEQR--QLAEHEQAARE----------------DRQPGQY-----WVDVEPPK 1252
Query: 274 ALGDVFEAL 282
AL DV E++
Sbjct: 1253 ALSDVVESI 1261
Score = 45.1 bits (105), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 52/104 (50%), Gaps = 9/104 (8%)
Query: 116 LEKRINYTFQDKSF----LLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
L K +N + D S LL A+S P A + Y+RLE LGDA + +L + YL+ F
Sbjct: 834 LIKELNAKYFDHSIAEYDLLAAVSSP---AAFVDVDYERLELLGDAYLKYLSSVYLFVTF 890
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD--SPRLY 213
L G + R +++N + A R L +++ +PR++
Sbjct: 891 PTLHEGALHVSRQRIISNRSLLRNANRCGLPQYIQSKPLAPRMW 934
>gi|334187796|ref|NP_001190348.1| dicer-like protein 4 [Arabidopsis thaliana]
gi|332005448|gb|AED92831.1| dicer-like protein 4 [Arabidopsis thaliana]
Length = 1688
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 98/180 (54%), Gaps = 23/180 (12%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI-LPQSKIDVHEALYGPHPSAVRCPE 99
L K +ADVVE+L G +L G +GA+ FL+ + + + + V +A
Sbjct: 1216 LYKKTIADVVEALVGAFLVDSGFKGAVKFLKWIGVNVDFESLQVQDACIASR-------- 1267
Query: 100 QARGLDPLRYIPECTQ-----LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFL 154
RY+P T+ LE +++Y F K L+QA HP+YN + YQRLEFL
Sbjct: 1268 --------RYLPLTTRNNLETLENQLDYKFLHKGLLVQAFIHPSYNRHG-GGCYQRLEFL 1318
Query: 155 GDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYE 214
GDA++D+L+T+Y + F L PG+++D+RS VNN A+ AV L + L +S L+E
Sbjct: 1319 GDAVLDYLMTSYFFTVFPKLKPGQLTDLRSLSVNNEALANVAVSFSLKRFLFCESIYLHE 1378
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
S +RLE LGDA + F V+ +L+ + L GE++ RS +VNN A++ +L ++
Sbjct: 1103 SLERLEVLGDAFLKFAVSRHLFLHHDSLDEGELTRRRSNVVNNSNLCRLAIKKNLQVYI 1161
>gi|145358264|ref|NP_197532.3| dicer-like protein 4 [Arabidopsis thaliana]
gi|322510021|sp|P84634.2|DCL4_ARATH RecName: Full=Dicer-like protein 4
gi|73672051|gb|AAZ80387.1| dicer-like 4 [Arabidopsis thaliana]
gi|332005447|gb|AED92830.1| dicer-like protein 4 [Arabidopsis thaliana]
Length = 1702
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 98/180 (54%), Gaps = 23/180 (12%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI-LPQSKIDVHEALYGPHPSAVRCPE 99
L K +ADVVE+L G +L G +GA+ FL+ + + + + V +A
Sbjct: 1230 LYKKTIADVVEALVGAFLVDSGFKGAVKFLKWIGVNVDFESLQVQDACIASR-------- 1281
Query: 100 QARGLDPLRYIPECTQ-----LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFL 154
RY+P T+ LE +++Y F K L+QA HP+YN + YQRLEFL
Sbjct: 1282 --------RYLPLTTRNNLETLENQLDYKFLHKGLLVQAFIHPSYNRHG-GGCYQRLEFL 1332
Query: 155 GDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYE 214
GDA++D+L+T+Y + F L PG+++D+RS VNN A+ AV L + L +S L+E
Sbjct: 1333 GDAVLDYLMTSYFFTVFPKLKPGQLTDLRSLSVNNEALANVAVSFSLKRFLFCESIYLHE 1392
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 35/59 (59%)
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
S +RLE LGDA + F V+ +L+ + L GE++ RS +VNN A++ +L ++
Sbjct: 1117 SLERLEVLGDAFLKFAVSRHLFLHHDSLDEGELTRRRSNVVNNSNLCRLAIKKNLQVYI 1175
>gi|443925066|gb|ELU43989.1| type III restriction enzyme [Rhizoctonia solani AG-1 IA]
Length = 1442
Score = 108 bits (269), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 86/274 (31%), Positives = 127/274 (46%), Gaps = 52/274 (18%)
Query: 13 QDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQA 72
QD + + K S+ +K S F ++ K +AD ES G S G+E A+ +A
Sbjct: 1081 QDDSNEQKDDSNEQKENDSKGEF-EKTSFHTKSLADCTESTLGATYLSRGVEAALEVGEA 1139
Query: 73 LNILPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQL----EKRINYTFQDKS 128
L + L G P +R R +D E T L E+++ Y F++ S
Sbjct: 1140 LGL----------PLGGTTPWHLR-----REVDVFARKSEITMLFAPVEEKLGYKFKNAS 1184
Query: 129 FLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
+ +A +H Y+ ++ SY RLEFLGD++ D V ++Y F ++PG++S RS +VN
Sbjct: 1185 LVAEAFTHTAYDLSQ-GPSYNRLEFLGDSLFDLYVVKFMYLKFPKMTPGQMSWARSRLVN 1243
Query: 189 NVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLI 248
TF AV L+LHKH+L S L + V FAQ E EIS EE
Sbjct: 1244 ASTFGKLAVGLELHKHILTSSANLQKAVASFAQEVE----EISLEE-------------- 1285
Query: 249 FFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEAL 282
++ +D PKA+ DVFEA+
Sbjct: 1286 -------------ILQICWKIDAPKAISDVFEAI 1306
>gi|440468299|gb|ELQ37466.1| RNase3 domain-containing protein [Magnaporthe oryzae Y34]
gi|440485699|gb|ELQ65629.1| RNase3 domain-containing protein [Magnaporthe oryzae P131]
Length = 1658
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 123/251 (49%), Gaps = 21/251 (8%)
Query: 37 DRIKLGDKVVADVVESLTGVYLRSCGIEGAMLF---LQALNILPQSKIDVHEALYGPHPS 93
D LGDK +ADV E+L G + + + F ++A+ ++ SK +A + + +
Sbjct: 1165 DEHALGDKSIADVCEALIGAAYLTAQAQSSPNFDLAVKAVTVMTHSKTHTMQA-WSDYYA 1223
Query: 94 AVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNAN-RITTSYQRLE 152
+ +CPE + C+Q++ ++ Y F++ L A HP+Y SYQRLE
Sbjct: 1224 SYQCPEWLSTPPSQTQLELCSQIKNKMGYRFKNPRLLRCAFMHPSYPRQYENIPSYQRLE 1283
Query: 153 FLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
FLGD+++D + YL++ P +++ + AMV+N F AV L H+HL+H P L
Sbjct: 1284 FLGDSLLDMVCVDYLFKKHPDKDPQWLTEHKMAMVSNQFFGCVAVGLGFHRHLIHMQPAL 1343
Query: 213 YENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVP 272
++T +A E+ ++ EE + + R E+D D + +E P
Sbjct: 1344 GGSITEWA--------ELVTKKREEARQLAVRRGQ-----REEDYARDFW---IEVHHPP 1387
Query: 273 KALGDVFEALV 283
K L D+ EA V
Sbjct: 1388 KCLPDILEAYV 1398
>gi|389633725|ref|XP_003714515.1| dicer-like protein 1 [Magnaporthe oryzae 70-15]
gi|158706447|sp|A4RKC3.2|DCL1_MAGO7 RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease DCL1; Includes: RecName:
Full=ATP-dependent helicase DCL1
gi|351646848|gb|EHA54708.1| dicer-like protein 1 [Magnaporthe oryzae 70-15]
Length = 1591
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 123/251 (49%), Gaps = 21/251 (8%)
Query: 37 DRIKLGDKVVADVVESLTGVYLRSCGIEGAMLF---LQALNILPQSKIDVHEALYGPHPS 93
D LGDK +ADV E+L G + + + F ++A+ ++ SK +A + + +
Sbjct: 1165 DEHALGDKSIADVCEALIGAAYLTAQAQSSPNFDLAVKAVTVMTHSKTHTMQA-WSDYYA 1223
Query: 94 AVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNAN-RITTSYQRLE 152
+ +CPE + C+Q++ ++ Y F++ L A HP+Y SYQRLE
Sbjct: 1224 SYQCPEWLSTPPSQTQLELCSQIKNKMGYRFKNPRLLRCAFMHPSYPRQYENIPSYQRLE 1283
Query: 153 FLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
FLGD+++D + YL++ P +++ + AMV+N F AV L H+HL+H P L
Sbjct: 1284 FLGDSLLDMVCVDYLFKKHPDKDPQWLTEHKMAMVSNQFFGCVAVGLGFHRHLIHMQPAL 1343
Query: 213 YENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVP 272
++T +A E+ ++ EE + + R E+D D + +E P
Sbjct: 1344 GGSITEWA--------ELVTKKREEARQLAVRRGQ-----REEDYARDFW---IEVHHPP 1387
Query: 273 KALGDVFEALV 283
K L D+ EA V
Sbjct: 1388 KCLPDILEAYV 1398
>gi|302764440|ref|XP_002965641.1| hypothetical protein SELMODRAFT_84784 [Selaginella moellendorffii]
gi|300166455|gb|EFJ33061.1| hypothetical protein SELMODRAFT_84784 [Selaginella moellendorffii]
Length = 524
Score = 107 bits (268), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 121/250 (48%), Gaps = 46/250 (18%)
Query: 37 DRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI---LPQSKIDVHEALYGPHPS 93
D +L KV+A+VVE+L G Y G +GA ++ L I +++ + A
Sbjct: 129 DLQELSSKVLANVVEALIGAYYVHHGDKGARHVVEWLGIETGFSDAELQIARA------G 182
Query: 94 AVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEF 153
+V PE +D LE + Y+F+ ++ L QAL+H + + Y+RLEF
Sbjct: 183 SVVSPEVLNSID-------FEGLENTLGYSFRSRNLLAQALTHSSSRQASMVPIYERLEF 235
Query: 154 LGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLY 213
+GDA++D L+T ++Y ++ L PG ++D+R A +N+ +FA V+ LH H+LH+S +
Sbjct: 236 IGDAVLDHLLTRHIYFSYKDLHPGRLTDLRCAALNSESFARAMVKHKLHAHILHESNDFH 295
Query: 214 ENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPK 273
+ +A+ H ++ EE +Y V PK
Sbjct: 296 SQIKTYAK------HALNMEENA------------------------IYSYGFGAVKAPK 325
Query: 274 ALGDVFEALV 283
LGDVF++LV
Sbjct: 326 VLGDVFQSLV 335
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 12/82 (14%)
Query: 112 ECTQLEKRINYTFQDKSFLLQALS----HPTYNANRITTSYQRLEFLGDAIIDFLVTAYL 167
+ QL K INY S +L+AL+ H Y Y+R+E LGDA + + V+ L
Sbjct: 27 QAIQLRKAINYNI-PASKILEALTAANCHEPY-------CYERIELLGDAYLKWAVSTRL 78
Query: 168 YENFSHLSPGEISDIRSAMVNN 189
Y FS GE++ R +++N
Sbjct: 79 YLKFSDFPEGELTITRGKIISN 100
>gi|255550219|ref|XP_002516160.1| Ribonuclease III, putative [Ricinus communis]
gi|223544646|gb|EEF46162.1| Ribonuclease III, putative [Ricinus communis]
Length = 1660
Score = 107 bits (267), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 77/246 (31%), Positives = 117/246 (47%), Gaps = 50/246 (20%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+ K ++D VE++ G Y S G+ A+ +Q L + DV PS V +
Sbjct: 1200 MCSKTISDCVEAVIGAYYVSGGLMAALHVMQWLGM------DVEF-----DPSLV--DKI 1246
Query: 101 ARGLDPLRYIP---ECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
+ Y P E +E ++ YTF K L +A++H + I YQRLEFLGD+
Sbjct: 1247 IKTASVRSYTPKEDEIKGIESKLGYTFSVKFLLQEAMTHASMQEQGIGYCYQRLEFLGDS 1306
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
++D L+T +LY+N + + PGE++D+RSA V+N FA VR DL+KHL H S L +
Sbjct: 1307 VLDLLITWHLYQNHTSMDPGELTDLRSACVSNENFAQVVVRRDLYKHLQHCSTLLLSQIK 1366
Query: 218 RFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGD 277
+ ++ HE SDE + +G PKALGD
Sbjct: 1367 EYLES----FHE-SDEVAKATGPKG-----------------------------PKALGD 1392
Query: 278 VFEALV 283
+ E++
Sbjct: 1393 LLESIA 1398
>gi|357512663|ref|XP_003626620.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355501635|gb|AES82838.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
Length = 1965
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 115/214 (53%), Gaps = 25/214 (11%)
Query: 10 DLYQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLF 69
D ++D EDG+ S SSSY L K +ADVVE+L GVY G A
Sbjct: 1544 DEFEDEMEDGELESD-----SSSYRVL-----SSKTLADVVEALIGVYYVEGGKNAANHL 1593
Query: 70 LQALNILPQSKIDVHEALYGPH--PSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
++ + I + D E + P P ++ LR + + LE +N F+DK
Sbjct: 1594 MKWIGIHIEIDPDEMECITKPSNVPDSI-----------LRSV-DFDALEGALNIKFKDK 1641
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
L+++++H + ++ ++ YQRLEF+GDA++D L+T +L+ +++ L PG ++D+R+A V
Sbjct: 1642 GLLIESITHASRPSSGVSC-YQRLEFVGDAVLDHLITRHLFFSYTDLPPGRLTDLRAAAV 1700
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQ 221
NN FA V+ +LH HL H S L + + F +
Sbjct: 1701 NNENFARVTVKHNLHLHLRHGSSALEKQIKDFVK 1734
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 84/182 (46%), Gaps = 27/182 (14%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
QL+ INY Q S +L+AL T + + T Y+R E LGDA + ++V+ +L+
Sbjct: 1411 QLKNMINYPVQ-ASKILEAL---TAASCQETFCYERAELLGDAYLKWVVSRFLFLKHPQK 1466
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNH--EISD 232
G+++ +R MV+N+ YA+ L ++L D RFA ++ A + D
Sbjct: 1467 HEGQLTRMRQQMVSNMVLYRYALSKGLQSYILAD---------RFAPSRWAAPGVLPVFD 1517
Query: 233 EEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVE-----------YVDVPKALGDVFEA 281
E+ ++EE + F E D TD + +E V K L DV EA
Sbjct: 1518 EDTKDEESSLFDQERSIFKAERMD-NTDEFEDEMEDGELESDSSSYRVLSSKTLADVVEA 1576
Query: 282 LV 283
L+
Sbjct: 1577 LI 1578
>gi|87240866|gb|ABD32724.1| Helicase, C-terminal; Argonaute and Dicer protein, PAZ; Ribonuclease
III, bacterial [Medicago truncatula]
Length = 1939
Score = 107 bits (266), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 71/214 (33%), Positives = 115/214 (53%), Gaps = 25/214 (11%)
Query: 10 DLYQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLF 69
D ++D EDG+ S SSSY L K +ADVVE+L GVY G A
Sbjct: 1518 DEFEDEMEDGELESD-----SSSYRVL-----SSKTLADVVEALIGVYYVEGGKNAANHL 1567
Query: 70 LQALNILPQSKIDVHEALYGPH--PSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
++ + I + D E + P P ++ LR + + LE +N F+DK
Sbjct: 1568 MKWIGIHIEIDPDEMECITKPSNVPDSI-----------LRSV-DFDALEGALNIKFKDK 1615
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
L+++++H + ++ ++ YQRLEF+GDA++D L+T +L+ +++ L PG ++D+R+A V
Sbjct: 1616 GLLIESITHASRPSSGVSC-YQRLEFVGDAVLDHLITRHLFFSYTDLPPGRLTDLRAAAV 1674
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQ 221
NN FA V+ +LH HL H S L + + F +
Sbjct: 1675 NNENFARVTVKHNLHLHLRHGSSALEKQIKDFVK 1708
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 82/184 (44%), Gaps = 25/184 (13%)
Query: 115 QLEKRINYTFQDK--SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
QL+ INY Q S L+ L T + + T Y+R E LGDA + ++V+ +L+
Sbjct: 1379 QLKNMINYPVQASKVSSQLKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKHP 1438
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNH--EI 230
G+++ +R MV+N+ YA+ L ++L D RFA ++ A +
Sbjct: 1439 QKHEGQLTRMRQQMVSNMVLYRYALSKGLQSYILAD---------RFAPSRWAAPGVLPV 1489
Query: 231 SDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVE-----------YVDVPKALGDVF 279
DE+ ++EE + F E D TD + +E V K L DV
Sbjct: 1490 FDEDTKDEESSLFDQERSIFKAERMD-NTDEFEDEMEDGELESDSSSYRVLSSKTLADVV 1548
Query: 280 EALV 283
EAL+
Sbjct: 1549 EALI 1552
>gi|255548081|ref|XP_002515097.1| dicer-1, putative [Ricinus communis]
gi|223545577|gb|EEF47081.1| dicer-1, putative [Ricinus communis]
Length = 1543
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 75/208 (36%), Positives = 112/208 (53%), Gaps = 21/208 (10%)
Query: 14 DPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQAL 73
D EDG+ S SSSY L K +ADVVE+L G+Y G A ++ +
Sbjct: 1125 DEIEDGELESD-----SSSYRVLS-----SKTLADVVEALIGIYYVEGGKTAANHLMRWI 1174
Query: 74 NILPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQA 133
I + + D E PS V PE LR I + LE +N FQD+ L++A
Sbjct: 1175 GI--KVEFDHEEIDSAIRPSNV--PESI-----LRSI-DFDALEGALNIKFQDRGLLVEA 1224
Query: 134 LSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFA 193
++H + ++ ++ YQRLEF+GDA++D L+T +L+ +++L PG ++D+R+A VNN FA
Sbjct: 1225 ITHASRPSSGVSC-YQRLEFVGDAVLDHLITRHLFFTYTNLPPGRLTDLRAAAVNNENFA 1283
Query: 194 SYAVRLDLHKHLLHDSPRLYENVTRFAQ 221
AV LH HL H S L + + F +
Sbjct: 1284 RVAVNHKLHVHLRHGSSALEKQIRDFVR 1311
Score = 43.5 bits (101), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
QL+ I+Y+ L+ L T + + T Y+R E LGDA + ++V+ +L+ +
Sbjct: 985 QLKDIIHYSVP----ALKILEALTAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQK 1040
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
G+++ +R MV+N+ YA+ L ++ D
Sbjct: 1041 HEGQLTRMRQQMVSNMVLYQYALIKGLQSYIQAD 1074
>gi|358332040|dbj|GAA50766.1| dicer-like protein 1 [Clonorchis sinensis]
Length = 774
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 79/263 (30%), Positives = 127/263 (48%), Gaps = 47/263 (17%)
Query: 39 IKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCP 98
+KL DK +AD++E+L G +L+ GI GA LQ I S +D + S RC
Sbjct: 484 VKLTDKSLADMIEALLGCFLQCIGIRGACGLLQRFGI---SFMDCINDTFNSSASMWRCF 540
Query: 99 EQ----------------ARGLDPLRYIPEC--TQLEKRINYTFQDKSFLLQALSHPTYN 140
Q ARG + + + + L+ R+ Y F++++ L +A +H +Y+
Sbjct: 541 FQDAVCLTNQLSKLTIGSARGDEATKAELDAGISILQGRLGYVFKNQALLHEARTHSSYS 600
Query: 141 ANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLD 200
+ + T YQRLEFLGDA++ ++V+ L++ F PG +++ RS +VNN+ A V L
Sbjct: 601 SLKPTVCYQRLEFLGDAVLGYVVSNDLFKRFPDYDPGMLTNHRSLIVNNLVLARVLVDLK 660
Query: 201 LHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTD 260
LH + H+ P L V + R+ ++D E E I QT+
Sbjct: 661 LHDGIRHNIPSLPSMVDKL------RSVRLADVTSLSELREKI--------------QTN 700
Query: 261 VYGRVVEYVDVPKALGDVFEALV 283
+ + K LGDVFE+L+
Sbjct: 701 ITASPM------KILGDVFESLI 717
>gi|302815180|ref|XP_002989272.1| hypothetical protein SELMODRAFT_129431 [Selaginella moellendorffii]
gi|300143015|gb|EFJ09710.1| hypothetical protein SELMODRAFT_129431 [Selaginella moellendorffii]
Length = 524
Score = 107 bits (266), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 120/250 (48%), Gaps = 46/250 (18%)
Query: 37 DRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI---LPQSKIDVHEALYGPHPS 93
D +L KV+A+VVE+L G Y G +GA ++ L I +++ + A
Sbjct: 129 DLQELSSKVLANVVEALIGAYYVHHGDKGARHVVEWLGIETGFSDAELQIARA------G 182
Query: 94 AVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEF 153
+V PE +D LE + Y+F ++ L QAL+H + + Y+RLEF
Sbjct: 183 SVVSPEVLNSID-------FEGLENTLGYSFGSRNLLAQALTHSSSRQASMVPIYERLEF 235
Query: 154 LGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLY 213
+GDA++D L+T ++Y ++ L PG ++D+R A +N+ +FA V+ LH H+LH+S +
Sbjct: 236 IGDAVLDHLLTRHIYFSYKDLHPGRLTDLRCAALNSESFARAMVKHKLHAHILHESNDFH 295
Query: 214 ENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPK 273
+ +A+ H ++ EE +Y V PK
Sbjct: 296 SQIKTYAK------HALNMEE------------------------NAIYSYGFGAVKAPK 325
Query: 274 ALGDVFEALV 283
LGDVF++LV
Sbjct: 326 VLGDVFQSLV 335
Score = 43.5 bits (101), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 12/82 (14%)
Query: 112 ECTQLEKRINYTFQDKSFLLQALS----HPTYNANRITTSYQRLEFLGDAIIDFLVTAYL 167
+ QL K INY S +L+AL+ H Y Y+R+E LGDA + + V+ L
Sbjct: 27 QAIQLRKAINYNI-PASKILEALTAANCHEPY-------CYERIELLGDAYLKWAVSTRL 78
Query: 168 YENFSHLSPGEISDIRSAMVNN 189
Y FS GE++ R +++N
Sbjct: 79 YLKFSDFPEGELTITRGKIISN 100
>gi|168027292|ref|XP_001766164.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
gi|162682596|gb|EDQ69013.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
Length = 1460
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 102/192 (53%), Gaps = 23/192 (11%)
Query: 41 LGDKVVADVVESLTGVYL---RSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRC 97
L K ++DV E+L G YL R+C EGA+ F+ + IDVH +
Sbjct: 1161 LCSKTISDVTEALIGAYLEYGRNC--EGALKFMT------WAGIDVH--------FDSKL 1204
Query: 98 PEQARGLDPLR----YIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEF 153
E A P+ Y + EKRI YTF++K L+AL+H + YQRLEF
Sbjct: 1205 MEAASKASPVDLSYDYGEDLKAFEKRIGYTFKNKYLPLEALTHFSNMVGDQIRCYQRLEF 1264
Query: 154 LGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLY 213
LGDA++DFL+T +L+ + +PG ++ +R+A VNN FA AV+ LH +L H S RL
Sbjct: 1265 LGDAVLDFLLTRHLFTSHPTSTPGLLTSLRTASVNNERFARVAVKHRLHCYLRHGSGRLL 1324
Query: 214 ENVTRFAQNQEA 225
+ F ++ EA
Sbjct: 1325 HQIEEFVKSFEA 1336
>gi|168039663|ref|XP_001772316.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162676303|gb|EDQ62787.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1275
Score = 106 bits (265), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 68/186 (36%), Positives = 102/186 (54%), Gaps = 17/186 (9%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L K +ADV E+L G + G+E A + L ++ V S++R +
Sbjct: 637 LQGKTIADVFEALIGAHYIHGGVEAAQAMMGWLGC----EVGVS--------SSIREEAR 684
Query: 101 ARGLDPLRYIPEC--TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAI 158
R L + E ++LE +NY FQ+K L++AL+H + + YQRLEFLGDA+
Sbjct: 685 TRVHGQLELLSEAKVSELEILLNYKFQNKGLLVEALTHASCRRHS-GDCYQRLEFLGDAV 743
Query: 159 IDFLVTAYLYENFSHLS--PGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENV 216
+DFL+T + Y N ++L PG ++D+RSA VNN FA AVR +LH +LLH+S L V
Sbjct: 744 LDFLITKHFYANSANLKRDPGLLTDLRSAAVNNECFARVAVRHNLHLYLLHNSSDLAARV 803
Query: 217 TRFAQN 222
++
Sbjct: 804 DKYVHG 809
>gi|339239929|ref|XP_003375890.1| putative RNase3 domain protein [Trichinella spiralis]
gi|316975421|gb|EFV58865.1| putative RNase3 domain protein [Trichinella spiralis]
Length = 1903
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/268 (31%), Positives = 127/268 (47%), Gaps = 47/268 (17%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHE------- 85
+N L + + DK VAD VE+L G YL CG + FL L + + ++ +
Sbjct: 1554 FNLLAQQGISDKGVADCVEALIGAYLLFCGTRRTLDFLHWLGLKVEDEVSLRGFSRCIVS 1613
Query: 86 ---------ALYGPHPSAV--RCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQAL 134
LYG SA+ + L L +Q E I Y F+D+S L+QAL
Sbjct: 1614 PTPISFANFDLYGVTKSALINNSADSEACLKTLWNRFSLSQFEDIIGYRFKDRSLLVQAL 1673
Query: 135 SHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFAS 194
+H TY N +T YQRLEFLGDA++D L+T +LYE+ SPG ++D+RSA+
Sbjct: 1674 THSTYFYNEVTDCYQRLEFLGDAVLDHLITRHLYEDKRMHSPGMLTDLRSAL-------- 1725
Query: 195 YAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEE 254
+ ++ P L + +F + +E + E V L +L+E
Sbjct: 1726 ---------YFMYLCPGLMMMIEKFVKTLNII------KENANFDREVRVHLLNLYLLEG 1770
Query: 255 KDVQTDVYGRVVEYVDVPKALGDVFEAL 282
++ E V+VPKALGD+FE++
Sbjct: 1771 EEENA------EEQVEVPKALGDIFESV 1792
Score = 41.6 bits (96), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 37/62 (59%)
Query: 145 TTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKH 204
T + + LE LGD+ + ++ T Y Y+ +S + G++S +RS M++N R ++ ++
Sbjct: 1415 TFNLEGLEILGDSFLKYVTTVYCYKAYSKMHEGKLSLLRSRMISNYNLYKLGKRKNIPQY 1474
Query: 205 LL 206
++
Sbjct: 1475 MI 1476
>gi|357114316|ref|XP_003558946.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Brachypodium
distachyon]
Length = 1888
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 65/182 (35%), Positives = 103/182 (56%), Gaps = 12/182 (6%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L K +ADVVE+L GVY + G A ++ + I +++D E P P P+
Sbjct: 1482 LSSKTLADVVEALIGVYYVAGGKIAANHLMKWIGI--HAELDPQEI---PPPKIYNIPDS 1536
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
+R I T LE + FQ+K FL++A++H + ++ ++ YQRLEF+GDA++D
Sbjct: 1537 I-----MRSINFDT-LESIMGIKFQNKGFLVEAITHASRPSSGVSC-YQRLEFVGDAVLD 1589
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
L+T +L+ ++ L PG ++D+R+A VNN FA AV+ LH HL H S L + F
Sbjct: 1590 HLITKHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFV 1649
Query: 221 QN 222
++
Sbjct: 1650 KD 1651
Score = 44.3 bits (103), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 64/127 (50%), Gaps = 13/127 (10%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
QL++ I+Y + +L+AL T + + T Y+R E LGDA + ++V+ +L+ +
Sbjct: 1327 QLKEIIDYPVP-ATKILEAL---TAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQK 1382
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEE 234
G+++ +R MV+N+ +A+ L ++ D RFA ++ A + +
Sbjct: 1383 HEGQLTRMRQQMVSNMVLYQFALNKTLQSYIQAD---------RFAPSRWAAPGVLPVFD 1433
Query: 235 EEEEEEE 241
EE E E
Sbjct: 1434 EETRESE 1440
>gi|449457995|ref|XP_004146733.1| PREDICTED: dicer-like protein 4-like [Cucumis sativus]
Length = 1657
Score = 106 bits (264), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 113/215 (52%), Gaps = 21/215 (9%)
Query: 8 DFDLYQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAM 67
D + D T + K + E S +++L + K ++DVVE+L G +L G + A+
Sbjct: 1130 DIHSHDDATNNAK---ANETKCSKGHHWLQK-----KTISDVVEALVGAFLVDSGFKAAI 1181
Query: 68 LFLQALNILPQSKID-VHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQD 126
FL+ + I + + V +AL + + A +D + L+ + + F
Sbjct: 1182 AFLKWIGIQVEFEASLVTDALMASNAYVL----LADSID-------ISALQNSLGHRFLH 1230
Query: 127 KSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAM 186
K LLQAL HP+Y+ + YQRLEFLGDA++D+L+T+YLY + L PG+++D+RS
Sbjct: 1231 KGLLLQALVHPSYHKHG-GGCYQRLEFLGDAVLDYLITSYLYSAYPKLKPGQLTDLRSVF 1289
Query: 187 VNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQ 221
V N FA+ AV +K LL DS L ++ +
Sbjct: 1290 VRNEAFANVAVDRFFYKFLLCDSTSLLSDIKSYVH 1324
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
S +RLE LGD+ + F V YL+ GE++ RS +V N A R +L + +
Sbjct: 1044 SLERLEILGDSFLKFAVARYLFLTHDKFDEGELTRRRSYLVKNFNLLKLATRKNLQVY-I 1102
Query: 207 HDSP 210
D P
Sbjct: 1103 RDQP 1106
>gi|170091728|ref|XP_001877086.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648579|gb|EDR12822.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1358
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 135/276 (48%), Gaps = 44/276 (15%)
Query: 13 QDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQA 72
+DP GKK + S +L GDK VADVVE++ G S G E A+ +A
Sbjct: 986 RDPPFYGKKNKKKARQDEQSSQWL-----GDKAVADVVEAIIGAAYISGGRETALQVTKA 1040
Query: 73 LNILPQSKI----DVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQ-LEKRINYTFQDK 127
L I P S I D + P P A + PE T +E+ I + FQ
Sbjct: 1041 LAI-PISNINRWSDFGRNVSTPPPDAS-----------AKLRPESTSAIERIIGHNFQRP 1088
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
L QAL+H + + + SY RLEF+GDAI+DF+V +++ LSPG ++ ++ AMV
Sbjct: 1089 HLLAQALTHSSMQGHE-SASYGRLEFIGDAILDFMVIQHIFNRDQTLSPGALTLLKGAMV 1147
Query: 188 NNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCL 247
+N A+ V L KHLL +S +L ++ +A +AR +++E
Sbjct: 1148 SNSALAAVCVSSGLRKHLLFESYQLAGSIEVYANELKAR------QQKE----------- 1190
Query: 248 IFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+L E++ ++ G+ ++ PKAL DV E+++
Sbjct: 1191 --YLAAEREGRSP--GQYWLGIEPPKALSDVVESII 1222
>gi|449505410|ref|XP_004162460.1| PREDICTED: LOW QUALITY PROTEIN: dicer-like protein 4-like [Cucumis
sativus]
Length = 1228
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 113/215 (52%), Gaps = 21/215 (9%)
Query: 8 DFDLYQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAM 67
D + D T + K + E S +++L + K ++DVVE+L G +L G + A+
Sbjct: 701 DIHSHDDATNNAK---ANETKCSKGHHWLQK-----KTISDVVEALVGAFLVDSGFKAAI 752
Query: 68 LFLQALNILPQSKID-VHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQD 126
FL+ + I + + V +AL + + A +D + L+ + + F
Sbjct: 753 AFLKWIGIQVEFEASLVTDALMASNAYVL----LADSID-------ISALQNSLGHRFLH 801
Query: 127 KSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAM 186
K LLQAL HP+Y+ + YQRLEFLGDA++D+L+T+YLY + L PG+++D+RS
Sbjct: 802 KGLLLQALVHPSYHKHG-GGCYQRLEFLGDAVLDYLITSYLYSAYPKLKPGQLTDLRSVF 860
Query: 187 VNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQ 221
V N FA+ AV +K LL DS L ++ +
Sbjct: 861 VRNEAFANVAVDRFFYKFLLCDSTSLLSDIKSYVH 895
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
S +RLE LGD+ + F V YL+ GE++ RS +V N A R +L + +
Sbjct: 615 SLERLEILGDSFLKFAVARYLFLTHDKFDEGELTRRRSYLVKNFNLLKLATRKNLQVY-I 673
Query: 207 HDSP 210
D P
Sbjct: 674 RDQP 677
>gi|224068194|ref|XP_002302679.1| dicer-like protein [Populus trichocarpa]
gi|222844405|gb|EEE81952.1| dicer-like protein [Populus trichocarpa]
Length = 1817
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 74/218 (33%), Positives = 118/218 (54%), Gaps = 22/218 (10%)
Query: 4 LSNLDFDLYQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGI 63
+++LD D Y++ EDG+ S +SSY L K +ADVVE+L GVY G
Sbjct: 1435 MNHLD-DGYENEIEDGELESD-----ASSYRVLS-----SKTLADVVEALIGVYYVEGGK 1483
Query: 64 EGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYT 123
++ + I Q + D E P V PE LR + + LE ++
Sbjct: 1484 NAVNHLMKWIGI--QVEFDHEEIDGASRPFNV--PESV-----LRSV-DFDTLEGALDIK 1533
Query: 124 FQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIR 183
F D+ L++A++H + ++ ++ YQRLEF+GDA++D L+T +L+ +++L PG ++D+R
Sbjct: 1534 FNDRGLLIEAITHASRPSSGVSC-YQRLEFVGDAVLDHLITRHLFFTYTNLPPGRLTDLR 1592
Query: 184 SAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQ 221
+A VNN FA AV+ LH HL H S L + + F +
Sbjct: 1593 AAAVNNENFARVAVKHKLHVHLRHGSSALEKQIRDFVR 1630
Score = 45.8 bits (107), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+L+ INY S +L+AL T + + T Y+R E LGDA + ++V+ +L+ +
Sbjct: 1305 ELKDIINYPVP-ASKILEAL---TAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQK 1360
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
G+++ +R MV+N+ YA+ L ++ D
Sbjct: 1361 HEGQLTRMRQQMVSNMVLYQYALNKGLQSYIQAD 1394
>gi|225453660|ref|XP_002268369.1| PREDICTED: endoribonuclease Dicer homolog 1-like [Vitis vinifera]
Length = 1971
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 73/208 (35%), Positives = 111/208 (53%), Gaps = 21/208 (10%)
Query: 14 DPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQAL 73
D EDG+ S SSSY L K +ADVVE+L GVY G A ++ +
Sbjct: 1553 DEMEDGELESD-----SSSYRVLS-----SKTLADVVEALIGVYYVEGGKNAANHLMKWI 1602
Query: 74 NILPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQA 133
I Q + D + + P V PE LR + T LE +N F ++ L++A
Sbjct: 1603 GI--QVEFDPEDIVCATGPCNV--PESI-----LRSVNFDT-LEGALNIKFNNRGLLIEA 1652
Query: 134 LSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFA 193
++H + ++ ++ YQRLEF+GDA++D L+T +L+ ++ L PG ++D+R+A VNN FA
Sbjct: 1653 ITHASRPSSGVSC-YQRLEFVGDAVLDHLITRHLFFTYTDLPPGRLTDLRAAAVNNENFA 1711
Query: 194 SYAVRLDLHKHLLHDSPRLYENVTRFAQ 221
AV+ LH HL H S L + + F +
Sbjct: 1712 RVAVKHKLHIHLRHGSSALEKQIRDFVK 1739
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 58/116 (50%), Gaps = 7/116 (6%)
Query: 93 SAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLE 152
SA R P R ++ + QL+ INY + +L+AL T + + T Y+R E
Sbjct: 1394 SAQRLPSIMRRVESMLL---AVQLKDVINYPVP-AAKILEAL---TAASCQETFCYERAE 1446
Query: 153 FLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
LGDA + ++V+ +L+ + G+++ +R MV+N+ A+ L ++ D
Sbjct: 1447 LLGDAYLKWVVSRFLFLKYPQKHEGQLTRMRQQMVSNMVLYQSALCKGLQSYIQAD 1502
>gi|15229816|ref|NP_189978.1| protein dicer-like 3 [Arabidopsis thaliana]
gi|7594553|emb|CAB88120.1| putative protein [Arabidopsis thaliana]
gi|94450858|gb|ABF19799.1| dicer-like 3 [Arabidopsis thaliana]
gi|332644321|gb|AEE77842.1| protein dicer-like 3 [Arabidopsis thaliana]
Length = 1531
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 116/243 (47%), Gaps = 52/243 (21%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARG 103
K V+D E+L G Y S G+ ++ ++ L I D + + + ++RC
Sbjct: 1090 KSVSDCAEALIGAYYVSGGLSASLHMMKWLGI--DVDFDPNLVVEAINRVSLRC------ 1141
Query: 104 LDPLRYIP---ECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
YIP E +LE++I + F K L +A++H + R + SY+RLEFLGD+++D
Sbjct: 1142 -----YIPKEDELIELERKIQHEFSAKFLLKEAITHSSL---RESYSYERLEFLGDSVLD 1193
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
FL+T +L+ + PGE++D+RSA VNN FA AV+ +LH HL + L + +
Sbjct: 1194 FLITRHLFNTYEQTGPGEMTDLRSACVNNENFAQVAVKNNLHTHLQRCATVLETQINDY- 1252
Query: 221 QNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFE 280
L+ F + D GR + + PKALGDV E
Sbjct: 1253 --------------------------LMSF------QKPDETGRSIPSIQGPKALGDVVE 1280
Query: 281 ALV 283
++
Sbjct: 1281 SIA 1283
>gi|334185717|ref|NP_001154662.2| protein dicer-like 3 [Arabidopsis thaliana]
gi|322518661|sp|Q9LXW7.2|DCL3_ARATH RecName: Full=Endoribonuclease Dicer homolog 3; AltName:
Full=Dicer-like protein 3; Short=AtDCL3
gi|332644322|gb|AEE77843.1| protein dicer-like 3 [Arabidopsis thaliana]
Length = 1580
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 116/243 (47%), Gaps = 52/243 (21%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARG 103
K V+D E+L G Y S G+ ++ ++ L I D + + + ++RC
Sbjct: 1139 KSVSDCAEALIGAYYVSGGLSASLHMMKWLGI--DVDFDPNLVVEAINRVSLRC------ 1190
Query: 104 LDPLRYIP---ECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
YIP E +LE++I + F K L +A++H + R + SY+RLEFLGD+++D
Sbjct: 1191 -----YIPKEDELIELERKIQHEFSAKFLLKEAITHSSL---RESYSYERLEFLGDSVLD 1242
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
FL+T +L+ + PGE++D+RSA VNN FA AV+ +LH HL + L + +
Sbjct: 1243 FLITRHLFNTYEQTGPGEMTDLRSACVNNENFAQVAVKNNLHTHLQRCATVLETQINDY- 1301
Query: 221 QNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFE 280
L+ F + D GR + + PKALGDV E
Sbjct: 1302 --------------------------LMSF------QKPDETGRSIPSIQGPKALGDVVE 1329
Query: 281 ALV 283
++
Sbjct: 1330 SIA 1332
>gi|334185719|ref|NP_001154663.2| protein dicer-like 3 [Arabidopsis thaliana]
gi|332644323|gb|AEE77844.1| protein dicer-like 3 [Arabidopsis thaliana]
Length = 1570
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 116/243 (47%), Gaps = 52/243 (21%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARG 103
K V+D E+L G Y S G+ ++ ++ L I D + + + ++RC
Sbjct: 1129 KSVSDCAEALIGAYYVSGGLSASLHMMKWLGI--DVDFDPNLVVEAINRVSLRC------ 1180
Query: 104 LDPLRYIP---ECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
YIP E +LE++I + F K L +A++H + R + SY+RLEFLGD+++D
Sbjct: 1181 -----YIPKEDELIELERKIQHEFSAKFLLKEAITHSSL---RESYSYERLEFLGDSVLD 1232
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
FL+T +L+ + PGE++D+RSA VNN FA AV+ +LH HL + L + +
Sbjct: 1233 FLITRHLFNTYEQTGPGEMTDLRSACVNNENFAQVAVKNNLHTHLQRCATVLETQINDY- 1291
Query: 221 QNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFE 280
L+ F + D GR + + PKALGDV E
Sbjct: 1292 --------------------------LMSF------QKPDETGRSIPSIQGPKALGDVVE 1319
Query: 281 ALV 283
++
Sbjct: 1320 SIA 1322
>gi|379987680|gb|AFD22620.1| dicer-like 3 protein, partial [Nicotiana attenuata]
Length = 596
Score = 104 bits (260), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 64/185 (34%), Positives = 103/185 (55%), Gaps = 17/185 (9%)
Query: 41 LGDK-VVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPE 99
+G K +++D VE+L G Y G A+ ++ L + +++++ PS V
Sbjct: 125 MGSKTIISDCVEALIGAYYVGGGFIAALKLMKWLGV--EAELE---------PSLVEDAI 173
Query: 100 QARGLDPLRYIPECTQ---LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGD 156
+ L Y P+ LE +++Y F K LL+A++H T ++ +YQRLEFLGD
Sbjct: 174 KTAFL--YSYTPKAKDIEDLELKLSYKFSVKGLLLEAITHATVLEVDVSYNYQRLEFLGD 231
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENV 216
+++D L+T YLY+ + PGE++D+RSA VNN FA AV+ +LH HL H S L +
Sbjct: 232 SVLDILITWYLYQKHKDIDPGELTDLRSASVNNDNFAYAAVKRELHVHLQHHSGYLESEI 291
Query: 217 TRFAQ 221
+ F +
Sbjct: 292 SAFVK 296
Score = 40.4 bits (93), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%)
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTF 192
S +RLE LGD+++ + V+ +L+ + G++SD RS V+N T
Sbjct: 9 SMERLELLGDSVLKYAVSCHLFLKYPKKHEGQLSDQRSWAVSNSTL 54
>gi|297815500|ref|XP_002875633.1| hypothetical protein ARALYDRAFT_484824 [Arabidopsis lyrata subsp.
lyrata]
gi|297321471|gb|EFH51892.1| hypothetical protein ARALYDRAFT_484824 [Arabidopsis lyrata subsp.
lyrata]
Length = 1521
Score = 104 bits (259), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 116/243 (47%), Gaps = 52/243 (21%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARG 103
K V+D E+L G Y S G+ ++ ++ L + D + + ++RC
Sbjct: 1080 KSVSDCAEALIGAYYVSGGLTASLHMMKWLGV--NVDFDPNLVVEAISRVSLRC------ 1131
Query: 104 LDPLRYIP---ECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
YIP E T+LE++I + F K L +A++H + + + SY+RLEFLGD+++D
Sbjct: 1132 -----YIPKDDELTELERKIQHEFSAKFLLKEAITHSSVHE---SYSYERLEFLGDSVLD 1183
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
FL+T +L+ + PGE++D+RSA VNN FA AV+ +LH HL + L + +
Sbjct: 1184 FLITRHLFNTYEQTGPGEMTDLRSACVNNENFAQVAVKNNLHIHLQRCATVLENQINEY- 1242
Query: 221 QNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFE 280
L+ F + D GR + + PKALGDV E
Sbjct: 1243 --------------------------LMSF------QKPDETGRSIPSIQGPKALGDVVE 1270
Query: 281 ALV 283
++
Sbjct: 1271 SIA 1273
>gi|157285013|gb|ABV31246.1| dicer-like 4 [Physcomitrella patens]
Length = 1445
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 101/186 (54%), Gaps = 17/186 (9%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L K +ADV E+L G + G+E A + L ++ V S++R +
Sbjct: 1112 LQGKTIADVFEALIGAHYIHGGVEAAQAMMGWLGC----EVGVS--------SSIREEAR 1159
Query: 101 ARGLDPLRYIPEC--TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAI 158
R L + E ++LE +NY FQ+K L++AL+H + + YQRL FLGDA+
Sbjct: 1160 TRVHGQLELLSEAKVSELEILLNYKFQNKGLLVEALTHASCRRHS-GDCYQRLGFLGDAV 1218
Query: 159 IDFLVTAYLYENFSHLS--PGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENV 216
+DFL+T + Y N ++L PG ++D+RSA VNN FA AVR +LH +LLH+S L V
Sbjct: 1219 LDFLITKHFYANSANLKRDPGLLTDLRSAAVNNECFARVAVRHNLHLYLLHNSSDLAARV 1278
Query: 217 TRFAQN 222
++
Sbjct: 1279 DKYVHG 1284
>gi|157285011|gb|ABV31245.1| dicer-like 3 [Physcomitrella patens]
Length = 1641
Score = 103 bits (258), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 70/192 (36%), Positives = 101/192 (52%), Gaps = 23/192 (11%)
Query: 41 LGDKVVADVVESLTGVYL---RSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRC 97
L K ++DV E+L G YL R+C EGA+ F+ + IDVH +
Sbjct: 1287 LCSKTISDVTEALIGAYLEYGRNC--EGALKFMT------WAGIDVH--------FDSKL 1330
Query: 98 PEQARGLDPLR----YIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEF 153
E A P+ Y + EKRI YTF++ L+AL+H + YQRLEF
Sbjct: 1331 MEAASKASPVDLSYDYGEDLKAFEKRIGYTFKNIYLPLEALTHFSNMVGDQIRCYQRLEF 1390
Query: 154 LGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLY 213
LGDA++DFL+T +L+ + +PG ++ +R+A VNN FA AV+ LH +L H S RL
Sbjct: 1391 LGDAVLDFLLTRHLFTSHPTSTPGLLTSLRTASVNNERFARVAVKHRLHCYLRHGSGRLL 1450
Query: 214 ENVTRFAQNQEA 225
+ F ++ EA
Sbjct: 1451 HQIEEFVKSFEA 1462
>gi|380706515|gb|AFD97515.1| dicer, partial [Hymenolepis microstoma]
Length = 1897
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 135/278 (48%), Gaps = 49/278 (17%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LPQSKIDVHEALYGPHPSAVRCP 98
L +K +AD VE+L G YL G A+ LQ + LP S + P + + P
Sbjct: 1529 LSNKSIADCVEALVGCYLTERGERSALKLLQWFGVECLPPS------SEMQPTGAPWKMP 1582
Query: 99 EQARGL--------DPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-------NANR 143
++ RGL D + ++ +LE I Y F+++ L++AL+H T + N
Sbjct: 1583 DE-RGLTEAEKIEIDRIYHVSRYDKLENTIGYRFKNRRLLIEALTHSTCRDLHSNPSVNN 1641
Query: 144 ITTS-------YQRLEFLGDAIIDFLVTAYLYEN-----FSHLSPGEISDIRSAMVNNVT 191
+S Y+RLEFLGDA++D+ VT L+E+ LSPG ++D+RSA+VNN
Sbjct: 1642 TPSSVFFGNGGYERLEFLGDAVLDYTVTRVLFESTDGETVRELSPGGLTDLRSALVNNAV 1701
Query: 192 FASYAV-RLDLHKHLLHDSPRLYENVTRFAQN-QEARNHEISDEEEEEEEEEGIVRCLIF 249
F + AV LH +L +P L E + F ++ + ++ + + + R
Sbjct: 1702 FGALAVTHCGLHAYLRGTAPYLTEGTSAFLRHIRNVSRGSLNSKRLLTPDSNTVAR---- 1757
Query: 250 FLIEEKDVQTDVYGRVVEY----VDVPKALGDVFEALV 283
+ + + Q D G V +VPKALGDVFE+L
Sbjct: 1758 --LNDAENQAD-SGAVRPSNEMEAEVPKALGDVFESLA 1792
Score = 38.9 bits (89), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
T LE RI Y + +LQ+L T A + +RLE +GD+ + F VT YLY +
Sbjct: 1402 TDLENRILYR-PGPAMILQSL---TRLAAGDFINMERLETIGDSFLKFAVTTYLYLKYPD 1457
Query: 174 LSPGEISDIRSAMVNN 189
G +S RS +V N
Sbjct: 1458 AQEGSLSLFRSHVVEN 1473
>gi|222619725|gb|EEE55857.1| hypothetical protein OsJ_04485 [Oryza sativa Japonica Group]
Length = 1839
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 96/189 (50%), Gaps = 18/189 (9%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID-VHEALYGPHPSAVRCPE 99
+ K +AD VE++ G Y G+ AM L+ L I + + D + +A+
Sbjct: 1113 MCSKTIADCVEAIIGAYYAGGGLRAAMAVLKWLGIGAEIEEDLIVQAILSASVQT----- 1167
Query: 100 QARGLDPLRYIPECT---QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGD 156
Y+P+ LE ++ Y+F K L++AL+HP+ Y+RLEFLGD
Sbjct: 1168 ---------YLPKDNVFEMLEAKLGYSFSVKGLLVEALTHPSQQELGAKYCYERLEFLGD 1218
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENV 216
A++D L+T YL+ + + GE++D+RSA VNN FA AV+ + H L H S L + +
Sbjct: 1219 AVLDILLTRYLFNSHKDTNEGELTDLRSASVNNENFAQVAVKHNFHHFLQHSSGLLLDQI 1278
Query: 217 TRFAQNQEA 225
T + E
Sbjct: 1279 TEYVNRLEG 1287
>gi|115441737|ref|NP_001045148.1| Os01g0909200 [Oryza sativa Japonica Group]
gi|75321191|sp|Q5N870.1|DCL3A_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 3a; AltName:
Full=Dicer-like protein 3a; Short=OsDCL3a
gi|56785369|dbj|BAD82327.1| putative Endoribonuclease Dicer homolog [Oryza sativa Japonica Group]
gi|113534679|dbj|BAF07062.1| Os01g0909200 [Oryza sativa Japonica Group]
Length = 1651
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 96/189 (50%), Gaps = 18/189 (9%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID-VHEALYGPHPSAVRCPE 99
+ K +AD VE++ G Y G+ AM L+ L I + + D + +A+
Sbjct: 1179 MCSKTIADCVEAIIGAYYAGGGLRAAMAVLKWLGIGAEIEEDLIVQAILSASVQT----- 1233
Query: 100 QARGLDPLRYIPECT---QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGD 156
Y+P+ LE ++ Y+F K L++AL+HP+ Y+RLEFLGD
Sbjct: 1234 ---------YLPKDNVFEMLEAKLGYSFSVKGLLVEALTHPSQQELGAKYCYERLEFLGD 1284
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENV 216
A++D L+T YL+ + + GE++D+RSA VNN FA AV+ + H L H S L + +
Sbjct: 1285 AVLDILLTRYLFNSHKDTNEGELTDLRSASVNNENFAQVAVKHNFHHFLQHSSGLLLDQI 1344
Query: 217 TRFAQNQEA 225
T + E
Sbjct: 1345 TEYVNRLEG 1353
Score = 42.4 bits (98), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 34/59 (57%)
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
S +RLE LGD+++ + V+ +L+ F + G++S IR M+ N T + ++ ++
Sbjct: 1064 SMERLELLGDSVLKYAVSCHLFLKFPNKDEGQLSSIRCHMICNATLYKLGIERNVQGYV 1122
>gi|125584735|gb|EAZ25399.1| hypothetical protein OsJ_09217 [Oryza sativa Japonica Group]
Length = 1883
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 102/182 (56%), Gaps = 12/182 (6%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L K +ADVVE+L GVY + G A ++ + I +++D E P P PE
Sbjct: 1477 LSSKTLADVVEALIGVYYVAGGKIAANHLMKWIGI--HAELDPEEI---PPPKPYDIPES 1531
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
+R I T L+ + FQ+K L++A++H + ++ ++ YQRLEF+GDA++D
Sbjct: 1532 I-----MRSINFDT-LKGVLGIEFQNKGLLVEAITHASRPSSGVSC-YQRLEFVGDAVLD 1584
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
L+T +L+ ++ L PG ++D+R+A VNN FA AV+ LH HL H S L + F
Sbjct: 1585 HLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFV 1644
Query: 221 QN 222
++
Sbjct: 1645 KD 1646
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 15/127 (11%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
QL+ I+Y + +L+AL T + + T Y+R E LGDA + ++V+ +L+ +
Sbjct: 1323 QLKDIIDYPV-PATKILEAL---TAASCQETLCYERAELLGDAYLKWVVSRFLFLKYPQK 1378
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNH--EISD 232
G+++ +R MV+N+ YA+ L ++ D RFA ++ A + D
Sbjct: 1379 HEGQLTRMRQQMVSNMVLYQYALNKTLQSYIQAD---------RFAPSRWAAPGVLPVFD 1429
Query: 233 EEEEEEE 239
EE E E
Sbjct: 1430 EESREYE 1436
>gi|75330224|sp|Q8LMR2.1|DCL1_ORYSJ RecName: Full=Endoribonuclease Dicer homolog 1; AltName:
Full=Dicer-like protein 1; Short=OsDCL1
gi|21426125|gb|AAM52322.1|AC105363_11 Putative CAF protein [Oryza sativa Japonica Group]
gi|108705906|gb|ABF93701.1| DEAD/DEAH box helicase carpel factory, putative, expressed [Oryza
sativa Japonica Group]
Length = 1883
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 102/182 (56%), Gaps = 12/182 (6%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L K +ADVVE+L GVY + G A ++ + I +++D E P P PE
Sbjct: 1477 LSSKTLADVVEALIGVYYVAGGKIAANHLMKWIGI--HAELDPEEI---PPPKPYDIPES 1531
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
+R I T L+ + FQ+K L++A++H + ++ ++ YQRLEF+GDA++D
Sbjct: 1532 I-----MRSINFDT-LKGVLGIEFQNKGLLVEAITHASRPSSGVSC-YQRLEFVGDAVLD 1584
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
L+T +L+ ++ L PG ++D+R+A VNN FA AV+ LH HL H S L + F
Sbjct: 1585 HLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFV 1644
Query: 221 QN 222
++
Sbjct: 1645 KD 1646
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 15/127 (11%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
QL+ I+Y + +L+AL T + + T Y+R E LGDA + ++V+ +L+ +
Sbjct: 1323 QLKDIIDYPV-PATKILEAL---TAASCQETLCYERAELLGDAYLKWVVSRFLFLKYPQK 1378
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNH--EISD 232
G+++ +R MV+N+ YA+ L ++ D RFA ++ A + D
Sbjct: 1379 HEGQLTRMRQQMVSNMVLYQYALNKTLQSYIQAD---------RFAPSRWAAPGVLPVFD 1429
Query: 233 EEEEEEE 239
EE E E
Sbjct: 1430 EESREYE 1436
>gi|125542181|gb|EAY88320.1| hypothetical protein OsI_09779 [Oryza sativa Indica Group]
Length = 1883
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 64/182 (35%), Positives = 102/182 (56%), Gaps = 12/182 (6%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L K +ADVVE+L GVY + G A ++ + I +++D E P P PE
Sbjct: 1477 LSSKTLADVVEALIGVYYVAGGKIAANHLMKWIGI--HAELDPEEI---PPPKPYDIPES 1531
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
+R I T L+ + FQ+K L++A++H + ++ ++ YQRLEF+GDA++D
Sbjct: 1532 I-----MRSINFDT-LKGVLGIEFQNKGLLVEAITHASRPSSGVSC-YQRLEFVGDAVLD 1584
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
L+T +L+ ++ L PG ++D+R+A VNN FA AV+ LH HL H S L + F
Sbjct: 1585 HLITRHLFFTYTDLPPGRLTDLRAAAVNNENFARVAVKHKLHVHLRHGSSALETQIREFV 1644
Query: 221 QN 222
++
Sbjct: 1645 KD 1646
Score = 44.7 bits (104), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 63/127 (49%), Gaps = 13/127 (10%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
QL+ I+Y + +L+AL T + + T Y+R E LGDA + ++V+ +L+ +
Sbjct: 1323 QLKDIIDYPV-PATKILEAL---TAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQK 1378
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEE 234
G+++ +R MV+N+ YA+ L ++ D RFA ++ A + +
Sbjct: 1379 HEGQLTRMRQQMVSNMVLYQYALNKTLQSYIQAD---------RFAPSRWAAPGVLPVFD 1429
Query: 235 EEEEEEE 241
EE E E
Sbjct: 1430 EESREYE 1436
>gi|110520367|gb|ABG74922.1| Dicer-like 1b protein [Physcomitrella patens]
Length = 1695
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 99/182 (54%), Gaps = 11/182 (6%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L K +ADVVE G+Y G E A F+ + I P DV L + PE
Sbjct: 1282 LSSKTLADVVEVFMGMYYVEGGGEAATHFMNWVGI-PVEFDDVETDLA---TGGCQVPET 1337
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
+R I + + L+K + + F+++S L++A++H + + + YQRLEF+GDA++D
Sbjct: 1338 V-----MRSI-DFSSLQKNVGHEFRERSLLVEAITHASRPSLGVPC-YQRLEFVGDAVLD 1390
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
L+T YL+ +++L PG ++D+R+A VNN FA AV+ H HL H S L + F
Sbjct: 1391 HLITRYLFFKYTNLPPGRLTDLRAAAVNNENFARVAVKHSYHLHLRHGSTALETQIRNFV 1450
Query: 221 QN 222
+
Sbjct: 1451 ND 1452
>gi|356509849|ref|XP_003523657.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Glycine max]
Length = 1671
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 125/253 (49%), Gaps = 51/253 (20%)
Query: 35 FLDR--IKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID-VHEALYGPH 91
F DR + K +AD VE+L G Y G+ ++ ++ L I + ++ V EA+
Sbjct: 1199 FCDRGHCWMCSKTIADCVEALIGAYYVDGGLFASLNVMKWLGIGAELELSLVDEAITAA- 1257
Query: 92 PSAVRC-PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQR 150
S C P+++ E LEK+I Y F K LL+A++H + I Y+R
Sbjct: 1258 -SLRTCLPKES----------EIASLEKKIGYEFSVKGLLLEAITHLSEKELGIGCCYER 1306
Query: 151 LEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSP 210
LEFLGD+++D L+T +LY++ + + PG ++D+RSA VNN FA AVR +LH+HLLH S
Sbjct: 1307 LEFLGDSVLDLLITWHLYQSHTDIDPGVLTDLRSASVNNDNFAQVAVRHNLHQHLLHSSG 1366
Query: 211 RLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVD 270
L ++ + + +I E D R + +
Sbjct: 1367 LLLSQISEYVK-----------------------------VISESD------PRSLPSIS 1391
Query: 271 VPKALGDVFEALV 283
PKALGDV E++V
Sbjct: 1392 APKALGDVVESIV 1404
>gi|414879098|tpg|DAA56229.1| TPA: hypothetical protein ZEAMMB73_255524 [Zea mays]
Length = 595
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/185 (33%), Positives = 100/185 (54%), Gaps = 16/185 (8%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARG 103
K ++D VE+L G Y G++ A L+ I + + ++ ++VR
Sbjct: 129 KTISDCVEALIGAYYVEGGLKAAFAVLKWFQIETEIEEELIMEALSS--ASVR------- 179
Query: 104 LDPLRYIPEC---TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
Y+P+ LE ++ YTFQ K L++AL+H + + T YQRLEFLGDA++D
Sbjct: 180 ----NYLPKVDVVELLEAKLGYTFQMKGLLIEALTHSSQQESGATYCYQRLEFLGDAVLD 235
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
L+T +L+ + GE++D+RSA VNN FA AV+ +LH+ L H S L + +T +
Sbjct: 236 ILITRHLFLSHKDTDEGELTDLRSASVNNENFAQVAVKHNLHQFLQHSSGFLQDQITEYV 295
Query: 221 QNQEA 225
+ E+
Sbjct: 296 NSLES 300
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 28/46 (60%)
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTF 192
S +RLE LGD+++ + V+A+L+ F + G++S R + N T
Sbjct: 11 SMERLELLGDSVLKYAVSAHLFMTFLNKHEGQLSSRRQETICNATL 56
>gi|357129053|ref|XP_003566182.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Brachypodium
distachyon]
Length = 1806
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 96/184 (52%), Gaps = 16/184 (8%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARG 103
K ++D VE++ G Y G+ A+ FL+ L + ++ E L + + Q
Sbjct: 1353 KTISDCVEAIIGAYYVGGGLRAAVAFLRWLGV----DAEIEEELI--MQTILSASMQT-- 1404
Query: 104 LDPLRYIPE---CTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
Y+P+ L ++ Y F K LL+AL+HP++ + SYQRLEFLGDA +D
Sbjct: 1405 -----YLPKIDLTEALGAKLGYAFSVKGLLLEALTHPSHQESEERYSYQRLEFLGDAALD 1459
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
L+T +L+ + GE++D+RSA VNN FA AV+ H L H S L + +T +A
Sbjct: 1460 ILLTWHLFNSHKDTDEGELTDLRSASVNNENFAKVAVKHKFHHFLQHSSEILLDQITEYA 1519
Query: 221 QNQE 224
+ E
Sbjct: 1520 NSLE 1523
Score = 37.7 bits (86), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 114 TQLEKRINYTFQDKSFL-LQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
+QL + Y SFL L+A++ + + S +RLE LGD+++ + V+ +L+ F
Sbjct: 1203 SQLRSEVAYDSNISSFLILEAITTLRCSED---FSMERLELLGDSVLKYAVSCHLFLKFP 1259
Query: 173 HLSPGEISDIRSAMVNNVTF 192
+ G++S R+ +++N
Sbjct: 1260 NKHEGQLSSSRTDIISNAAL 1279
>gi|62320294|dbj|BAD94606.1| CAF protein [Arabidopsis thaliana]
Length = 690
Score = 100 bits (250), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 101/182 (55%), Gaps = 13/182 (7%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L K +ADVVE+L GVY G A ++ + I + D + V PE
Sbjct: 278 LSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTL----KNVNVPES 333
Query: 101 A-RGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAII 159
+ +D +R LE+ + Y F++K L++A++H + ++ ++ YQRLEF+GDA++
Sbjct: 334 VLKSIDFVR-------LERALKYEFKEKGLLVEAITHASRPSSGVSC-YQRLEFVGDAVL 385
Query: 160 DFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
D L+T +L+ ++ L PG ++D+R+A VNN FA AV+ LH +L H S L + + F
Sbjct: 386 DHLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREF 445
Query: 220 AQ 221
+
Sbjct: 446 VK 447
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 85/189 (44%), Gaps = 39/189 (20%)
Query: 113 CTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
QL+ I+Y S +L+AL T + + T Y+R E LGDA + ++V+ +L+ +
Sbjct: 124 AVQLKNLISYPI-PTSKILEAL---TAASCQETFCYERAELLGDAYLKWVVSRFLFLKYP 179
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS-----------PRLYENVTR--- 218
G+++ +R MV+N+ +A+ L ++ D P +++ T+
Sbjct: 180 QKHEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPVFDEDTKDGG 239
Query: 219 ---FAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEY-VDVPKA 274
F + Q+ + E SD E+ E E+G ++ G + Y V K
Sbjct: 240 SSFFDEEQKPVSEENSDVFEDGEMEDG-----------------ELEGDLSSYRVLSSKT 282
Query: 275 LGDVFEALV 283
L DV EAL+
Sbjct: 283 LADVVEALI 291
>gi|218189575|gb|EEC72002.1| hypothetical protein OsI_04862 [Oryza sativa Indica Group]
Length = 1858
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 99/189 (52%), Gaps = 18/189 (9%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID-VHEALYGPHPSAVRCPE 99
+ K +AD E++ G Y G+ AM L+ L I + + D + +A+ ++V+
Sbjct: 1113 MCSKTIADCFEAIIGAYYAGGGLRAAMAVLKWLGIGAEIEEDLIVQAILS---ASVQ--- 1166
Query: 100 QARGLDPLRYIPECT---QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGD 156
Y+P+ LE ++ Y+F K L++AL+HP+ Y+RLEFLGD
Sbjct: 1167 --------TYLPKDNVFEMLEAKLGYSFSVKGLLVEALTHPSQQELGAKYCYERLEFLGD 1218
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENV 216
A++D L+T YL+ + + GE++D+RSA VNN FA AV+ + H L H S L + +
Sbjct: 1219 AVLDILLTRYLFNSHKDTNEGELTDLRSASVNNENFAQVAVKHNFHHFLQHSSGLLLDQI 1278
Query: 217 TRFAQNQEA 225
T + E
Sbjct: 1279 TEYVNRLEG 1287
>gi|374259482|gb|AEZ02177.1| Dicer [Arabidopsis thaliana]
Length = 1886
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 100/181 (55%), Gaps = 11/181 (6%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L K +ADVVE+L GVY G A ++ + I + D + V PE
Sbjct: 1474 LSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTL----KNVNVPES 1529
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
L + ++ LE+ + Y F++K L++A++H + ++ ++ YQRLEF+GDA++D
Sbjct: 1530 V--LKSIDFV----GLERALKYEFKEKGLLVEAITHASRPSSGVSC-YQRLEFVGDAVLD 1582
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
L+T +L+ ++ L PG ++D+R+A VNN FA AV+ LH +L H S L + + F
Sbjct: 1583 HLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFV 1642
Query: 221 Q 221
+
Sbjct: 1643 K 1643
Score = 45.1 bits (105), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 39/187 (20%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
QL+ I+Y S +L+AL T + + T Y+R E LGDA + ++V+ +L+ +
Sbjct: 1322 QLKNLISYPIP-TSKILEAL---TAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQK 1377
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS-----------PRLYENVTR----- 218
G+++ +R MV+N+ +A+ L ++ D P +++ T+
Sbjct: 1378 HEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPVFDEDTKDGGSS 1437
Query: 219 -FAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEY-VDVPKALG 276
F + Q+ + E SD E+ E E+G ++ G + Y V K L
Sbjct: 1438 FFDEEQKPVSEENSDVFEDGEMEDG-----------------ELEGDLSSYRVLSSKTLA 1480
Query: 277 DVFEALV 283
DV EAL+
Sbjct: 1481 DVVEALI 1487
>gi|334182203|ref|NP_001184881.1| endoribonuclease Dicer [Arabidopsis thaliana]
gi|332189100|gb|AEE27221.1| endoribonuclease Dicer [Arabidopsis thaliana]
Length = 1910
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 100/181 (55%), Gaps = 11/181 (6%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L K +ADVVE+L GVY G A ++ + I + D + V PE
Sbjct: 1498 LSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTL----KNVNVPES 1553
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
L + ++ LE+ + Y F++K L++A++H + ++ ++ YQRLEF+GDA++D
Sbjct: 1554 V--LKSIDFV----GLERALKYEFKEKGLLVEAITHASRPSSGVSC-YQRLEFVGDAVLD 1606
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
L+T +L+ ++ L PG ++D+R+A VNN FA AV+ LH +L H S L + + F
Sbjct: 1607 HLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFV 1666
Query: 221 Q 221
+
Sbjct: 1667 K 1667
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 39/187 (20%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
QL+ I+Y S +L+AL T + + T Y+R E LGDA + ++V+ +L+ +
Sbjct: 1346 QLKNLISYPIP-TSKILEAL---TAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQK 1401
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS-----------PRLYENVTR----- 218
G+++ +R MV+N+ +A+ L ++ D P +++ T+
Sbjct: 1402 HEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPVFDEDTKDGGSS 1461
Query: 219 -FAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEY-VDVPKALG 276
F + Q+ + E SD E+ E E+G ++ G + Y V K L
Sbjct: 1462 FFDEEQKPVSEENSDVFEDGEMEDG-----------------ELEGDLSSYRVLSSKTLA 1504
Query: 277 DVFEALV 283
DV EAL+
Sbjct: 1505 DVVEALI 1511
>gi|15223286|ref|NP_171612.1| endoribonuclease Dicer [Arabidopsis thaliana]
gi|34922211|sp|Q9SP32.2|DCL1_ARATH RecName: Full=Endoribonuclease Dicer homolog 1; AltName:
Full=Dicer-like protein 1; Short=AtDCL1; AltName:
Full=Protein ABNORMAL SUSPENSOR 1; AltName: Full=Protein
CARPEL FACTORY; AltName: Full=Protein SHORT INTEGUMENTS
1; AltName: Full=Protein SUSPENSOR 1
gi|11559645|gb|AAG38019.1|AF292940_1 short integuments 1 [Arabidopsis thaliana]
gi|11559647|gb|AAG38020.1|AF292941_1 short integuments 1 [Arabidopsis thaliana]
gi|332189099|gb|AEE27220.1| endoribonuclease Dicer [Arabidopsis thaliana]
Length = 1909
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 100/181 (55%), Gaps = 11/181 (6%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L K +ADVVE+L GVY G A ++ + I + D + V PE
Sbjct: 1497 LSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTL----KNVNVPES 1552
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
L + ++ LE+ + Y F++K L++A++H + ++ ++ YQRLEF+GDA++D
Sbjct: 1553 V--LKSIDFV----GLERALKYEFKEKGLLVEAITHASRPSSGVSC-YQRLEFVGDAVLD 1605
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
L+T +L+ ++ L PG ++D+R+A VNN FA AV+ LH +L H S L + + F
Sbjct: 1606 HLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFV 1665
Query: 221 Q 221
+
Sbjct: 1666 K 1666
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 39/187 (20%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
QL+ I+Y S +L+AL T + + T Y+R E LGDA + ++V+ +L+ +
Sbjct: 1345 QLKNLISYPIP-TSKILEAL---TAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQK 1400
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS-----------PRLYENVTR----- 218
G+++ +R MV+N+ +A+ L ++ D P +++ T+
Sbjct: 1401 HEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPVFDEDTKDGGSS 1460
Query: 219 -FAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEY-VDVPKALG 276
F + Q+ + E SD E+ E E+G ++ G + Y V K L
Sbjct: 1461 FFDEEQKPVSEENSDVFEDGEMEDG-----------------ELEGDLSSYRVLSSKTLA 1503
Query: 277 DVFEALV 283
DV EAL+
Sbjct: 1504 DVVEALI 1510
>gi|414864448|tpg|DAA43005.1| TPA: hypothetical protein ZEAMMB73_941906 [Zea mays]
Length = 1307
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/218 (31%), Positives = 111/218 (50%), Gaps = 17/218 (7%)
Query: 5 SNLDFDLYQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIE 64
S L +LY D D + + SS Y L K +ADVVE+L GVY + G
Sbjct: 873 SELQKNLYDDYDGDSMQEDGEIEGDSSCYRVLS-----SKTLADVVEALIGVYYVAGGKI 927
Query: 65 GAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTF 124
++ + I +++D E P PE + + + LE + F
Sbjct: 928 ATNHLMKWIGI--NAELDPQEI---PSSKPYNIPESI--IKSINF----DTLEGALGIKF 976
Query: 125 QDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRS 184
Q+K L++A++H + ++ ++ YQRLEF+GDA++D L+T +L+ ++ L PG ++D+R+
Sbjct: 977 QNKGLLVEAITHASRPSSGVSC-YQRLEFVGDAVLDHLITKHLFFTYTDLPPGRLTDLRA 1035
Query: 185 AMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQN 222
A VNN FA AV+ LH HL H S L + F ++
Sbjct: 1036 AAVNNENFARVAVKHKLHVHLRHGSSALETQIREFVKD 1073
Score = 44.7 bits (104), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 62/127 (48%), Gaps = 13/127 (10%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
QL+ I Y +L+AL T + + T Y+R E LGDA + ++V+ +L+ +
Sbjct: 748 QLKDIIGYPVPANK-ILEAL---TAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQK 803
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEE 234
G+++ +R MV+N+ YA+ +L ++ D RFA ++ A + +
Sbjct: 804 HEGQLTRMRQQMVSNMILYQYALNKNLQSYIQAD---------RFAPSRWAAPGVLPVFD 854
Query: 235 EEEEEEE 241
EE + E
Sbjct: 855 EETRDSE 861
>gi|297848414|ref|XP_002892088.1| hypothetical protein ARALYDRAFT_333551 [Arabidopsis lyrata subsp.
lyrata]
gi|297337930|gb|EFH68347.1| hypothetical protein ARALYDRAFT_333551 [Arabidopsis lyrata subsp.
lyrata]
Length = 1962
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 100/181 (55%), Gaps = 11/181 (6%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L K +ADVVE+L GVY G A ++ + I + D E V PE
Sbjct: 1550 LSSKTLADVVEALIGVYYVEGGKVAANHLMKWIGIHVEDDPDEVEGTV----KNVNVPES 1605
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
L + ++ LE+ + + F++K L++A++H + ++ ++ YQRLEF+GDA++D
Sbjct: 1606 V--LKSIDFV----GLERALKFEFKEKGLLVEAITHASRPSSGVSC-YQRLEFVGDAVLD 1658
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
L+T +L+ ++ L PG ++D+R+A VNN FA AV+ LH +L H S L + + F
Sbjct: 1659 HLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFV 1718
Query: 221 Q 221
+
Sbjct: 1719 K 1719
Score = 46.6 bits (109), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/187 (26%), Positives = 85/187 (45%), Gaps = 39/187 (20%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
QL+ I+Y S +L+AL T + + T Y+R E LGDA + ++V+ YL+ +
Sbjct: 1398 QLKNLISYPIP-TSKILEAL---TAASCQETFCYERAELLGDAYLKWVVSRYLFLKYPQK 1453
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS-----------PRLYENVTR----- 218
G+++ +R MV+N+ +A+ L ++ D P +++ T+
Sbjct: 1454 HEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPVFDEDTKDGGSS 1513
Query: 219 -FAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEY-VDVPKALG 276
F + Q+ + E SD E+ E E+G ++ G + Y V K L
Sbjct: 1514 FFDEEQKPVSEENSDVFEDGEMEDG-----------------ELEGDLSSYRVLSSKTLA 1556
Query: 277 DVFEALV 283
DV EAL+
Sbjct: 1557 DVVEALI 1563
>gi|6102610|gb|AAF03534.1|AF187317_1 CAF protein [Arabidopsis thaliana]
Length = 1909
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 100/181 (55%), Gaps = 11/181 (6%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L K +ADVVE+L GVY G A ++ + I + D + V PE
Sbjct: 1497 LSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTL----KNVNVPES 1552
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
L + ++ LE+ + Y F++K L++A++H + ++ ++ YQRLEF+GDA++D
Sbjct: 1553 V--LKSIDFV----GLERALKYEFKEKGLLVEAITHASRPSSGVSC-YQRLEFVGDAVLD 1605
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
L+T +L+ ++ L PG ++D+R+A VNN FA AV+ LH +L H S L + + F
Sbjct: 1606 HLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQIREFV 1665
Query: 221 Q 221
+
Sbjct: 1666 K 1666
Score = 45.1 bits (105), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 39/187 (20%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
QL+ I+Y S +L+AL T + + T Y+R E LGDA + ++V+ +L+ +
Sbjct: 1345 QLKNLISYPIP-TSKILEAL---TAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQK 1400
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS-----------PRLYENVTR----- 218
G+++ +R MV+N+ +A+ L ++ D P +++ T+
Sbjct: 1401 HEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPVFDEDTKDGGSS 1460
Query: 219 -FAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEY-VDVPKALG 276
F + Q+ + E SD E+ E E+G ++ G + Y V K L
Sbjct: 1461 FFDEEQKPVSEENSDVFEDGEMEDG-----------------ELEGDLSSYRVLSSKTLA 1503
Query: 277 DVFEALV 283
DV EAL+
Sbjct: 1504 DVVEALI 1510
>gi|6715634|gb|AAF26461.1|AC007323_2 T25K16.4 [Arabidopsis thaliana]
Length = 2024
Score = 100 bits (248), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 124/252 (49%), Gaps = 31/252 (12%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L K +ADVVE+L GVY G A ++ + I + D + V PE
Sbjct: 1585 LSSKTLADVVEALIGVYYVEGGKIAANHLMKWIGIHVEDDPDEVDGTL----KNVNVPES 1640
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
L + ++ LE+ + Y F++K L++A++H + ++ ++ YQRLEF+GDA++D
Sbjct: 1641 V--LKSIDFV----GLERALKYEFKEKGLLVEAITHASRPSSGVSC-YQRLEFVGDAVLD 1693
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
L+T +L+ ++ L PG ++D+R+A VNN FA AV+ LH +L H S L + V +
Sbjct: 1694 HLITRHLFFTYTSLPPGRLTDLRAAAVNNENFARVAVKHKLHLYLRHGSSALEKQVNKIK 1753
Query: 221 QNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEE--KDVQT-------DVYGRVVEYVDV 271
+ + V L F I E K+VQT + +G +
Sbjct: 1754 KQSILFSKSFKCL---------TVWLLFVFQIREFVKEVQTESSKPGFNSFG--LGDCKA 1802
Query: 272 PKALGDVFEALV 283
PK LGD+ E++
Sbjct: 1803 PKVLGDIVESIA 1814
Score = 45.1 bits (105), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 48/187 (25%), Positives = 85/187 (45%), Gaps = 39/187 (20%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
QL+ I+Y S +L+AL T + + T Y+R E LGDA + ++V+ +L+ +
Sbjct: 1433 QLKNLISYPIP-TSKILEAL---TAASCQETFCYERAELLGDAYLKWVVSRFLFLKYPQK 1488
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS-----------PRLYENVTR----- 218
G+++ +R MV+N+ +A+ L ++ D P +++ T+
Sbjct: 1489 HEGQLTRMRQQMVSNMVLYQFALVKGLQSYIQADRFAPSRWSAPGVPPVFDEDTKDGGSS 1548
Query: 219 -FAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEY-VDVPKALG 276
F + Q+ + E SD E+ E E+G ++ G + Y V K L
Sbjct: 1549 FFDEEQKPVSEENSDVFEDGEMEDG-----------------ELEGDLSSYRVLSSKTLA 1591
Query: 277 DVFEALV 283
DV EAL+
Sbjct: 1592 DVVEALI 1598
>gi|392593064|gb|EIW82390.1| ribonuclease III [Coniophora puteana RWD-64-598 SS2]
Length = 1217
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 121/249 (48%), Gaps = 41/249 (16%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKI----DVHEALYGPHP--SA 94
LGDK +ADVVE++ G S G + A+ ++AL I P + + D + P P SA
Sbjct: 865 LGDKTIADVVEAIIGAAYLSGGCDVALRVMKALTI-PLNSVEQWSDFGRKVLTPPPRVSA 923
Query: 95 VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFL 154
P L ++ EK + + L QAL+H + TT YQRLEFL
Sbjct: 924 ALPPRS------LEFV------EKLVRRKVKYPHLLAQALTHGSIQGYDATT-YQRLEFL 970
Query: 155 GDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYE 214
GDAI+DF+V ++Y LSPG ++ ++SAMV N A+ V L++HLL D + E
Sbjct: 971 GDAILDFMVVRHIYHRDESLSPGVMTILKSAMVANSALAAICVWSGLNEHLLVDDYEVSE 1030
Query: 215 NVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKA 274
+ ++A++ +A+ E+ + G F+L ++ PKA
Sbjct: 1031 SFKKYARDLKAKEQEVRTASLRDGTPIG-----QFWL----------------HITPPKA 1069
Query: 275 LGDVFEALV 283
L DV E+++
Sbjct: 1070 LSDVVESII 1078
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 127 KSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAM 186
+ LL ALS P+ Y+RLE LGDA + ++ + Y++ + + G + ++R M
Sbjct: 720 EGLLLSALSAPS---ALYAFDYERLELLGDAFLKYITSIYVFVIYPAHAEGSLHNLRQKM 776
Query: 187 VNNVTFASYAVRLDLHKHL 205
+N A+ ++L ++
Sbjct: 777 TSNKALLQNALAIELPPYI 795
>gi|414453403|gb|AFX00003.1| Dicer [Mnemiopsis leidyi]
Length = 2002
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 126/255 (49%), Gaps = 25/255 (9%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNIL---PQSKI---DVHEALYGPHPSA 94
+G K VAD +E+L G+ + G + L + + QS+ D++ LY P
Sbjct: 1644 MGTKDVADSMEALLGLCVARYGYRKGVDLLDRIKVTTFQAQSEAEPDDLNNHLYKQTP-- 1701
Query: 95 VRCPEQARGLDPLRYI---PECTQL---EKRINYTFQDKSFLLQALSHPTYNANRITTSY 148
P Q L+P+ C L EK I Y F++ +LL+AL+H ++ I Y
Sbjct: 1702 ---PSQISNLNPVAIRLARSRCDNLRTVEKAIGYEFKEPLYLLEALTHASFT--EIDACY 1756
Query: 149 QRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
QRLEFLGDA++D L+ +YE+ G+++D+ S++V N T + +L LHK LL+D
Sbjct: 1757 QRLEFLGDAVLDVLMVFRIYEDHPEYDQGQMTDLLSSLVCNTTLSKVCTKLQLHKSLLYD 1816
Query: 209 SPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEY 268
S L+ + F N E D+ E+ ++ + R + + + + + +
Sbjct: 1817 SAELFNVLAGFFMNFE------KDQLEQWCKDLSLERVFVDTVDCDTPDKIPILNLDNKV 1870
Query: 269 VDVPKALGDVFEALV 283
V PK LGD+ E+++
Sbjct: 1871 VQAPKLLGDLVESVI 1885
Score = 38.9 bits (89), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 149 QRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVR-LDLHKHLLH 207
+RLEFLGD + F+ T Y Y G +S RS M++N A + + ++L +++L+
Sbjct: 1480 ERLEFLGDRFLKFVSTLYYYRTMPDKHEGWLSRYRSEMISNQNLAVRSCKEIELPRYILN 1539
>gi|357131511|ref|XP_003567380.1| PREDICTED: endoribonuclease Dicer homolog 3a-like [Brachypodium
distachyon]
Length = 1183
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 59/187 (31%), Positives = 99/187 (52%), Gaps = 16/187 (8%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+ K ++D VE++ G Y G+ A+ L+ L + ++I+ + ++++
Sbjct: 721 MCSKTISDCVEAIIGAYYVGGGLRAAVAVLRWLGV--DAEIEEELIMQTILSASMK---- 774
Query: 101 ARGLDPLRYIPE---CTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
Y+P+ LE ++ Y F K LL+AL+HP++ + SY+RLEFLGDA
Sbjct: 775 -------TYVPKIDLVEALEAKLGYAFSVKGLLLEALTHPSHQESEERYSYERLEFLGDA 827
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
+D L+T +L+ + GE++D+RSA VNN FA AV+ LH L S L + +T
Sbjct: 828 ALDILLTWHLFSSHKDTDEGELTDLRSASVNNENFAKVAVKHKLHHFLQQSSGILLDQIT 887
Query: 218 RFAQNQE 224
+A + E
Sbjct: 888 EYANSLE 894
>gi|339242189|ref|XP_003377020.1| putative ribosomal protein S7e [Trichinella spiralis]
gi|316974223|gb|EFV57735.1| putative ribosomal protein S7e [Trichinella spiralis]
Length = 2029
Score = 97.1 bits (240), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/257 (29%), Positives = 118/257 (45%), Gaps = 49/257 (19%)
Query: 43 DKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYG---------PHPS 93
DK +AD VE+L G YL G+ A+ L+ I D+ L S
Sbjct: 1688 DKSIADCVEALVGCYLLEAGMRPAIKLLKWFGI------DIDGNLMNLLSSSSSSSSSSS 1741
Query: 94 AVRCPEQARGLDPLRYIP------ECTQLEKRINYTFQDKSFLLQALSHPTYNA--NRIT 145
C E + P I + E +I Y F +K++L+QAL+H +YN +T
Sbjct: 1742 TAFCSENCVLIGPEAKIHSIWTAYDLNSFEAKIGYRFTNKAYLIQALTHSSYNEVETPVT 1801
Query: 146 TSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
SY+RLEFLGDAI+D+L++ +LY + SPG +SD+R+A+VNN +
Sbjct: 1802 DSYERLEFLGDAILDYLISRHLYSSKRIRSPGLLSDLRAALVNN--------------YF 1847
Query: 206 LHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRV 265
L+ + L RF ++ E ++ + EE+D
Sbjct: 1848 LYFNAELLSVNERFVLAMRGLKESVNFHNE------------LYMMEEEQDDDEKETSEF 1895
Query: 266 VEYVDVPKALGDVFEAL 282
E+V+VPK LGD+FE++
Sbjct: 1896 AEHVEVPKPLGDIFESV 1912
>gi|389747383|gb|EIM88562.1| hypothetical protein STEHIDRAFT_155914 [Stereum hirsutum FP-91666
SS1]
Length = 1722
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 123/249 (49%), Gaps = 35/249 (14%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI-LPQ--SKIDVHEALYGPHPSAVRC 97
LGDK VADV E++ G + G E A+ +AL I +P+ D P P V
Sbjct: 1320 LGDKTVADVAEAIVGAAYVTGGREAALKASKALCIAVPRVDRWSDFGRKALAPPPD-VTA 1378
Query: 98 PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
+A ++ + I + + F+ L QAL+H + IT SY+RLEF+GDA
Sbjct: 1379 RLRAGSIEAVEAI---------LGHKFERPHLLAQALTHGSIQGYEIT-SYERLEFIGDA 1428
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
I+DF+V ++Y+ + LSPG ++ ++ AMV+N A+ + L ++L+ ++P L N+
Sbjct: 1429 ILDFMVIRHVYDRDTKLSPGAMTLLKGAMVSNSALAAVCIWAGLDEYLMFEAPVLAHNIR 1488
Query: 218 RFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGD 277
+AQ + E EE ++EG R + +E + PKAL D
Sbjct: 1489 AYAQ----KLREKQKEEYALAQQEG--RSPGQYWLE---------------TEPPKALSD 1527
Query: 278 VFEALVEDT 286
V E+++ T
Sbjct: 1528 VVESIIGAT 1536
>gi|392568586|gb|EIW61760.1| ribonuclease III [Trametes versicolor FP-101664 SS1]
Length = 1232
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/212 (31%), Positives = 107/212 (50%), Gaps = 16/212 (7%)
Query: 37 DRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI-LPQSKIDVHEALYGPHPSAV 95
+R+ +GDKVVADVVE++ S G EGA+ + L I LP G A
Sbjct: 849 NRLWMGDKVVADVVEAILAAAFLSGGHEGALQAARRLQIPLPNIAQWTDFTRIG----AQ 904
Query: 96 RCPEQARGLDPLRYIPECT--QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEF 153
+ + A ++ + T ++ + F L QAL+H + + SY+RLEF
Sbjct: 905 QGEQDAGAGAAGAFVLDDTVEAVQAIVGSVFSKPELLAQALTHGSAFGSSEGASYERLEF 964
Query: 154 LGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLY 213
+GDAI+DFLV ++++ HLSPG ++ ++ MV+N A++ V LH+HL S +L
Sbjct: 965 IGDAILDFLVARHIFQRHPHLSPGGLTLLKGGMVSNRALAAFCVTTGLHRHLHFASDQLA 1024
Query: 214 ENVTRFAQNQEARNHEISDEEEEEEEEEGIVR 245
+++ R+ S E E+E E + R
Sbjct: 1025 DSIQRYV---------TSLTELREKEYEAVAR 1047
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 33/61 (54%)
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+Y+RLEFLGDA + + + +LY G + ++R +++ N A+R+ + +
Sbjct: 733 NYERLEFLGDAFLKVIASNFLYVTMPTAGEGTLHNVRQSIIGNKVLHECAMRVGICPFVQ 792
Query: 207 H 207
H
Sbjct: 793 H 793
>gi|157285009|gb|ABV31244.1| dicer-like 1 [Physcomitrella patens]
Length = 1662
Score = 96.3 bits (238), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 16/193 (8%)
Query: 30 SSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYG 89
SS+Y L K +ADVVE+ G+Y G + A + + I ++ +A
Sbjct: 1253 SSAYRVLS-----SKTLADVVEAFIGIYYVEGGQDAATHLMNWIGI----PVEFDDAEAE 1303
Query: 90 PHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
PE + + LE I + F+ +S L++A++H + ++ + YQ
Sbjct: 1304 LAIGGCEVPET------VMLSIDFDSLEASIGHKFRKRSLLVEAITHASRPSSGVP-GYQ 1356
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEF+GDA++D+L+T +L+ ++ L PG ++D+R+A VNN FA AV+ H HL H S
Sbjct: 1357 RLEFVGDAVLDYLITRFLFFKYTDLPPGRLTDLRAAAVNNENFARVAVKHSFHLHLRHGS 1416
Query: 210 PRLYENVTRFAQN 222
L + F +
Sbjct: 1417 SALETQIRNFVND 1429
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
QL+ +I+Y S +L+AL T + + T SY+R E LGDA + ++V+ L+ +
Sbjct: 1095 QLKHQIDYPIA-ASKVLEAL---TAASCQETFSYERAELLGDAYLKWVVSRRLFLKYPCK 1150
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
G+++ +R +V+N YA+ L ++ D
Sbjct: 1151 HEGQLTRMRQQIVSNSVLYQYALDKGLQSYIQAD 1184
>gi|393246311|gb|EJD53820.1| ribonuclease III [Auricularia delicata TFB-10046 SS5]
Length = 1227
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 119/243 (48%), Gaps = 36/243 (14%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+G+K +ADV E++ G + G + + L + Q +DV + G +RC
Sbjct: 860 IGEKTIADVTEAILGAAFLTGGKNLVLRAAKRLAVKLQDYVDVKANIPGRSHVQLRC--- 916
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
+ L ++ E+ + Q + QAL+H +++ + TSYQRLEFLGDAI+D
Sbjct: 917 ----ESLEHV------ERLLGRPIQRPHLVAQALTHSVIDSS-LATSYQRLEFLGDAILD 965
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
LV Y++ + L P ++ +++AMV+N T A+ V+ LHKH++H SP L + +
Sbjct: 966 LLVVRYIW-RYEKLDPEALTLLKAAMVSNSTLAAVCVQCGLHKHIIHASPSLGVKIDNYV 1024
Query: 221 QNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFE 280
+ H D+E + E VR + + +E ++ PK L D+ E
Sbjct: 1025 KAL----HSARDKERALAQSE--VRQPVQYWLE---------------LEHPKPLSDLIE 1063
Query: 281 ALV 283
+L+
Sbjct: 1064 SLL 1066
Score = 43.1 bits (100), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 50/187 (26%), Positives = 78/187 (41%), Gaps = 19/187 (10%)
Query: 107 LRYIPECTQLEKRINYTFQD----KSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFL 162
LR I E T L K +N+ F D + LL A+S P+ + YQRLE LGD+++ FL
Sbjct: 696 LRRI-EDTLLVKLLNHQFFDNEIEERLLLSAISSPSLCGD---LDYQRLELLGDSVLKFL 751
Query: 163 VTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQN 222
+A L+ S E+ R + +N A R L +L + +
Sbjct: 752 ASAALFVRKPTSSESELHLGRQNIFSNRALTQAARRAGLPPFILTKPFSIKSWIPPNYDF 811
Query: 223 QEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVP------KALG 276
A +S+E+ E + + L E++ + D RV D K +
Sbjct: 812 DRAPAKPLSEEDALIPE-----KVAAYKLAREREQKADAQARVKRQQDASEHWIGEKTIA 866
Query: 277 DVFEALV 283
DV EA++
Sbjct: 867 DVTEAIL 873
>gi|168010516|ref|XP_001757950.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
gi|162690827|gb|EDQ77192.1| dsRNA-specific nuclease dicer and related ribonuclease
[Physcomitrella patens subsp. patens]
Length = 1662
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 98/193 (50%), Gaps = 16/193 (8%)
Query: 30 SSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYG 89
SS+Y L K +ADVVE+ G+Y G + A + + I ++ +A
Sbjct: 1253 SSAYRVLS-----SKTLADVVEAFIGIYYVEGGQDAATHLMNWIGI----PVEFDDAEAE 1303
Query: 90 PHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
PE + + LE I + F+ +S L++A++H + ++ + YQ
Sbjct: 1304 LAIGGCEVPET------VMLSIDFDSLEASIGHKFRKRSLLVEAITHASRPSSGVPC-YQ 1356
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEF+GDA++D+L+T +L+ ++ L PG ++D+R+A VNN FA AV+ H HL H S
Sbjct: 1357 RLEFVGDAVLDYLITRFLFFKYTDLPPGRLTDLRAAAVNNENFARVAVKHSFHLHLRHGS 1416
Query: 210 PRLYENVTRFAQN 222
L + F +
Sbjct: 1417 SALETQIRNFVND 1429
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 51/94 (54%), Gaps = 4/94 (4%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
QL+ +I+Y S +L+AL T + + T SY+R E LGDA + ++V+ L+ +
Sbjct: 1095 QLKHQIDYPIA-ASKVLEAL---TAASCQETFSYERAELLGDAYLKWVVSRRLFLKYPCK 1150
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
G+++ +R +V+N YA+ L ++ D
Sbjct: 1151 HEGQLTRMRQQIVSNSVLYQYALDKGLQSYIQAD 1184
>gi|393220706|gb|EJD06192.1| hypothetical protein FOMMEDRAFT_145449 [Fomitiporia mediterranea
MF3/22]
Length = 1473
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 117/259 (45%), Gaps = 44/259 (16%)
Query: 31 SSYNFLDRIKLGDKVVADVVESLTGVYLRSC--GIEGAMLFLQALNILPQSKIDVHEALY 88
SS L K+G + +A + L+ C GA LN Q+ +
Sbjct: 1050 SSVTSLGTCKIGSEEIALAHRTFPRRSLQDCMEASLGAAYVAGGLNFALQTGTALGLCFG 1109
Query: 89 GPHPSAVRCPEQARGLDPLRYIPECT---QLEKRINYTFQDKSFLLQALSHPTYNANRIT 145
GP P R P ++P +L++ + YTF++ L++A+ HP+++
Sbjct: 1110 GPTPWPERYPLT-------EFVPPAALFGKLQEDLQYTFRNGKLLVEAVKHPSFDFLENY 1162
Query: 146 TSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAV-RLDLHKH 204
YQRLEFLGDA+I+ +VT YLY F + G++S R+ + N T A+ AV RL LHK+
Sbjct: 1163 PCYQRLEFLGDAVIELVVTTYLYNKFPGANSGQMSWARARAICNTTLAALAVNRLSLHKY 1222
Query: 205 LLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGR 264
LL + L E+V + + A ++E DV + +
Sbjct: 1223 LLANCVELSEDVAKEVEILSAASYE--------------------------DVSLNDW-- 1254
Query: 265 VVEYVDVPKALGDVFEALV 283
D PK LGD+FE+++
Sbjct: 1255 ---RYDPPKVLGDIFESVI 1270
>gi|392585234|gb|EIW74574.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 1534
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/157 (38%), Positives = 84/157 (53%), Gaps = 13/157 (8%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L KV+ADVVESL G G E A+ ++ IDVH AL P +
Sbjct: 1150 LSTKVLADVVESLIGAAYVHGGFELAISLIRT--------IDVHLAL---SPLSASIEAA 1198
Query: 101 ARGLDP-LRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAII 159
DP L P+ ++ I YTF L++AL+H ++ + T SY+RLEFLGDA++
Sbjct: 1199 YAAADPSLEAPPQVAHVQNMIGYTFTKPLLLVEALTHASHQTDLRTVSYERLEFLGDAVL 1258
Query: 160 DFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYA 196
D L+ YLY++ + SPGEI+ +R + N F SYA
Sbjct: 1259 DMLIADYLYKHPKNFSPGEIT-LRKHAIGNALFLSYA 1294
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 58/114 (50%), Gaps = 11/114 (9%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S + A+S P ++ T+YQRLE LGDA++ +V AYLY G ++ R V
Sbjct: 1036 SLVKMAISAPV---SQEPTNYQRLESLGDAVLKLVVGAYLYSEHPLWHEGYLTQRRDHAV 1092
Query: 188 NNVTFASYAVRLDLHKHLLHD--SPRLYENVTRFAQNQEARNHEISDEEEEEEE 239
+NV A A++ L++ ++ D +P+ RF N ++EEE +E
Sbjct: 1093 SNVRLAKSAIQKKLYRWIVRDHFAPK------RFMPRYLTDNRGATNEEENSDE 1140
>gi|298711900|emb|CBJ48587.1| dicer-like 3 [Ectocarpus siliculosus]
Length = 1557
Score = 95.1 bits (235), Expect = 3e-17, Method: Composition-based stats.
Identities = 68/193 (35%), Positives = 103/193 (53%), Gaps = 11/193 (5%)
Query: 39 IKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCP 98
+K K +ADVVE+L G L + G A ++ L L + A G P+A P
Sbjct: 1247 VKASKKTIADVVEALLGAALVAGGNRSAAYIMEWLG-LAAASAAATAAAAGEDPAAPPLP 1305
Query: 99 EQARGLDP-LRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRI------TTSYQRL 151
E P R + LEKR+ YTF+ +QA++HP++ N I YQRL
Sbjct: 1306 EVYVATKPSARLMGNIRLLEKRLGYTFRYPWLCMQAITHPSWTINDIPPGTVPAQDYQRL 1365
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIR--SAMVNNVTFASYAVRLDLHKHLLHDS 209
EFLGDA++ ++VTA+LY S +P E++ I+ S+ V N + A+RLD+H H+L S
Sbjct: 1366 EFLGDAVLGWMVTAHLYFASSAFTPAELTRIKVTSSCVCNASLWVIALRLDVH-HVLRAS 1424
Query: 210 PRLYENVTRFAQN 222
P++ ++ F +N
Sbjct: 1425 PKILGHIHAFIEN 1437
>gi|328772805|gb|EGF82843.1| hypothetical protein BATDEDRAFT_23044 [Batrachochytrium dendrobatidis
JAM81]
Length = 1492
Score = 94.7 bits (234), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 63/167 (37%), Positives = 92/167 (55%), Gaps = 19/167 (11%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQAL-NILPQSKIDVHEALYGPHPSAVRCPEQAR 102
K++ADV E++ G L GI GA +++L N QS+ ++ Y H R
Sbjct: 1152 KILADVTEAIIGGCLIDGGIVGASEAVRSLLNRDYQSEWGLYFTQYQLH----------R 1201
Query: 103 GLDP---LRYIPECTQL-----EKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFL 154
+ P +R+I + L E +NYTFQDKS L +AL+H + + + +YQRLEFL
Sbjct: 1202 NVTPSHLVRFIGDIDSLVTLRIEAVLNYTFQDKSILWEALTHSSSSFSICGLNYQRLEFL 1261
Query: 155 GDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
GDA++ F++T YLY SPG IS ++S MV N A ++RL L
Sbjct: 1262 GDAVLSFIITKYLYTQLGSSSPGVISHLKSEMVCNQFLACVSIRLGL 1308
>gi|409050172|gb|EKM59649.1| hypothetical protein PHACADRAFT_114689 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1230
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 120/246 (48%), Gaps = 33/246 (13%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI-LPQSKIDVHEALYGPHPSAVRCPE 99
LGDK VADVVE++ G G + + ++ L +P+ I H + + A P
Sbjct: 877 LGDKTVADVVEAVVGAAFHQGGTDNVLRTMKILQFNMPE--IAEHSDFWRVY--APNAPS 932
Query: 100 QARGLDPLRYIPECTQ--LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
D +P T +E + F + L +AL+H + +N+ TSY RLEFLGD
Sbjct: 933 HKTFCD----LPVGTSEAVEAITGFKFHTPAILAEALTHGSI-SNQHMTSYDRLEFLGDG 987
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
I+D + Y+++ + LSPG +S +++AMV+N+T A+ AV L++H+ + S + V
Sbjct: 988 ILDSNIVWYIFKAYPKLSPGGLSLLKAAMVSNLTLAAVAVESGLYEHVRYCSKEIMSAVK 1047
Query: 218 RFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGD 277
+ Q + + D+E + E E R F +E VD PK L D
Sbjct: 1048 LYVQ----KIFTLRDQEYRDAEAES--RLPNQFWLE---------------VDAPKPLAD 1086
Query: 278 VFEALV 283
+ EA+V
Sbjct: 1087 LVEAIV 1092
>gi|167046022|gb|ABZ10542.1| dicer-like protein B [Placozoa sp. DMJ-2008]
Length = 357
Score = 94.0 bits (232), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 91/172 (52%), Gaps = 24/172 (13%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTS---YQRLEFLGDAIIDFLVTAYLYENFS 172
LE + Y+F+D+ L+ AL+H TYN NRI YQRLEFLGDAI+ ++V + Y +
Sbjct: 187 LEAVLGYSFKDRKLLISALTHATYNHNRIAEGVECYQRLEFLGDAILQYIVVRHCYHANN 246
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISD 232
+ P ++ D A + N + A+ + +HK+ ++SP L+ + + Q I D
Sbjct: 247 NYKPADLHDFVEASLQNESLAAMTMVYGIHKYFFYNSPSLFSQINQLLQ--------IVD 298
Query: 233 EEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVV-EYVDVPKALGDVFEALV 283
EE E+ EEK + VY + + V +PK LGD+FE+L+
Sbjct: 299 TNEECEQR---------LSTEEKAL---VYSNSLKDGVMIPKPLGDLFESLI 338
>gi|154283385|ref|XP_001542488.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150410668|gb|EDN06056.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 1359
Score = 93.6 bits (231), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 114/242 (47%), Gaps = 26/242 (10%)
Query: 18 DGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCG--------IEGAMLF 69
+G K+ + P S+ N + LGDK +AD+ E+L G L S G ++ +F
Sbjct: 1004 EGIKLLQGKAQPESAQN---KQALGDKTIADICEALIGASLLSGGKACRFDTAVKAVTVF 1060
Query: 70 LQALNIL---PQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQD 126
+ + N S ID++ PS A LD + Q+ R+ Y F
Sbjct: 1061 VDSDNHRVSDWNSYIDLYSL-----PSYQIAQADAGQLDLAK------QIGNRLGYHFTY 1109
Query: 127 KSFLLQALSHPTY-NANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSA 185
L A +H +Y +A YQRLEFLGD+++D + YLY ++ P +++ + A
Sbjct: 1110 PRLLRSAFTHASYPSAWSTVPCYQRLEFLGDSLLDMVCVEYLYHHYPDRDPQWLTEHKMA 1169
Query: 186 MVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVR 245
MV+N + V+L LHKHLL+ S L+ +TR+A+ E E +D + +
Sbjct: 1170 MVSNKFLGAVTVKLGLHKHLLYISNALFGQITRYAEEIEVAVAESADSPDAWTTTSDPPK 1229
Query: 246 CL 247
CL
Sbjct: 1230 CL 1231
>gi|195996181|ref|XP_002107959.1| hypothetical protein TRIADDRAFT_51985 [Trichoplax adhaerens]
gi|190588735|gb|EDV28757.1| hypothetical protein TRIADDRAFT_51985 [Trichoplax adhaerens]
Length = 685
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 90/172 (52%), Gaps = 24/172 (13%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTS---YQRLEFLGDAIIDFLVTAYLYENFS 172
LE + Y+F+D+ L+ AL+H TYN NRI YQRLEFLGDAI+ ++V + Y +
Sbjct: 433 LEAVLGYSFKDRKLLISALTHATYNHNRIAEGVECYQRLEFLGDAILQYIVVRHCYHANN 492
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISD 232
+ P ++ D A + N + A + +HK+ ++SP L+ + + Q I D
Sbjct: 493 NYKPADLHDFVEASLQNESLAVMTMVYGIHKYFFYNSPSLFSQINQLLQ--------IVD 544
Query: 233 EEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVV-EYVDVPKALGDVFEALV 283
EE E+ EEK + VY + + V +PK LGD+FE+L+
Sbjct: 545 TNEECEQR---------LSTEEKAL---VYSNSLKDGVMIPKPLGDLFESLI 584
>gi|358332039|dbj|GAA50765.1| endoribonuclease Dicer homolog 4 [Clonorchis sinensis]
Length = 1042
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 123/288 (42%), Gaps = 72/288 (25%)
Query: 39 IKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILP------QSK------------ 80
++L DK +AD+VE++ G +L+ G+ A L L I P Q K
Sbjct: 679 VRLTDKSLADMVEAIVGCFLQHMGLPAAFRLLTYLGISPYANPSSQGKEVGAWDQLLSET 738
Query: 81 ----------------IDVHEALYGPHPSAVRCPEQARGLDPL---------RYIPECTQ 115
++V Y P CP + + P R
Sbjct: 739 QQNNRHHIRHSTPFRPLEVRPTFYLPD---RNCPAGSTSILPNEIEKDDLIERLSVRLVG 795
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
L+ + Y F+D S L++AL+H + + SYQRLEFLGDA++ +++T YLYE
Sbjct: 796 LQNILGYQFKDISLLIRALTHQSSPQTSLFGSYQRLEFLGDAVLGYVITIYLYEKHVEFD 855
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEE 235
PG++++ RS +V+N + A V LH +++H+ P VT F Q +SD+ E
Sbjct: 856 PGQLTESRSNIVSNNSLACAIVEHQLHPYIIHNQPAFDTAVT-FIQFILDTTTSVSDQLE 914
Query: 236 EEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+E V++ + V K L DVFEA+V
Sbjct: 915 LLNQE------------------------VLKGLRV-KILADVFEAIV 937
>gi|167046020|gb|ABZ10541.1| dicer-like protein B [Trichoplax adhaerens]
Length = 357
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 58/172 (33%), Positives = 90/172 (52%), Gaps = 24/172 (13%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTS---YQRLEFLGDAIIDFLVTAYLYENFS 172
LE + Y+F+D+ L+ AL+H TYN NRI YQRLEFLGDAI+ ++V + Y +
Sbjct: 187 LEAVLGYSFKDRKLLISALTHATYNHNRIAEGVECYQRLEFLGDAILQYIVVRHCYHANN 246
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISD 232
+ P ++ D A + N + A + +HK+ ++SP L+ + + Q I D
Sbjct: 247 NYKPADLHDFVEASLQNESLAVMTMVYGIHKYFFYNSPSLFSQINQLLQ--------IVD 298
Query: 233 EEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVV-EYVDVPKALGDVFEALV 283
EE E+ EEK + VY + + V +PK LGD+FE+L+
Sbjct: 299 TNEECEQR---------LSTEEKAL---VYSNSLKDGVMIPKPLGDLFESLI 338
>gi|46132992|ref|XP_389201.1| hypothetical protein FG09025.1 [Gibberella zeae PH-1]
Length = 1495
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/246 (26%), Positives = 110/246 (44%), Gaps = 20/246 (8%)
Query: 38 RIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRC 97
R +L DK +ADV E+L G S + + ++A++ + ++K A Y + ++ +
Sbjct: 1122 RQRLADKSIADVCEALIGAAYLSSKDDNLNMAVKAVSQMCKAKYHTMMA-YDEYYASFKV 1180
Query: 98 PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
P+ + ++ Y F+ L A +HP+Y + +YQRLEFLGDA
Sbjct: 1181 PDWQKASPNANQRRLVQKVADATGYHFKSAPLLQSAFTHPSYAYSGNVPNYQRLEFLGDA 1240
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
+ID + YLY NF P +++ + AM +N V+L+LH HLL ++ + +
Sbjct: 1241 LIDMTIVEYLYRNFPLADPQWLTEHKMAMASNQFLGCLCVKLNLHHHLLFNTSQFISKIR 1300
Query: 218 RFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGD 277
+ E + +E EE+G + F+L PKA D
Sbjct: 1301 DYVAELEL----AEETARQEAEEDGTPMRMDFWL---------------NATTPPKAYAD 1341
Query: 278 VFEALV 283
EAL+
Sbjct: 1342 SIEALM 1347
>gi|240275432|gb|EER38946.1| ATP-dependent helicase DCL1 [Ajellomyces capsulatus H143]
Length = 495
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/223 (30%), Positives = 106/223 (47%), Gaps = 23/223 (10%)
Query: 37 DRIKLGDKVVADVVESLTGVYLRSCG--------IEGAMLFLQALNIL---PQSKIDVHE 85
++ LGDK +AD+ E+L G L S G ++ +F+ + N S ID++
Sbjct: 74 NKQALGDKTIADICEALIGASLLSGGKACRFDTAVKAVTVFVDSDNHRVSDWNSYIDLYS 133
Query: 86 ALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRI 144
PS A LD + Q+ R+ Y F L A +H +Y +A
Sbjct: 134 L-----PSYQIVQADAGQLDLAK------QIGNRLGYHFTYPRLLRSAFTHASYPSAWST 182
Query: 145 TTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKH 204
YQRLEFLGD+++D + YLY ++ P +++ + AMV+N + V+L LHKH
Sbjct: 183 VPCYQRLEFLGDSLLDMVCVEYLYHHYPDRDPQWLTEHKMAMVSNKFLGAVTVKLGLHKH 242
Query: 205 LLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCL 247
LL+ S L+ +TR+A+ E E +D + +CL
Sbjct: 243 LLYISNALFGQITRYAEEIEVAVAESADSPDAWTTTSDPPKCL 285
>gi|408393408|gb|EKJ72672.1| hypothetical protein FPSE_07072 [Fusarium pseudograminearum CS3096]
Length = 1510
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 112/252 (44%), Gaps = 20/252 (7%)
Query: 32 SYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPH 91
++ R L DK +ADV E+L G S + + ++A++ + ++K A Y +
Sbjct: 1131 AFKTTTRQCLADKSIADVCEALIGAAYLSSKDDNLNMAVKAVSQMCKAKYHTMMA-YDEY 1189
Query: 92 PSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRL 151
++ + P+ + ++ I Y F+ L A +HP+Y + +YQRL
Sbjct: 1190 YASFKVPDWQKASPNANQRRLVQKVADAIGYHFKSAPLLQSAFTHPSYTYSGNVPNYQRL 1249
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPR 211
EFLGDA+ID + YLY NF P +++ + AM +N V+L+LH HLL ++ +
Sbjct: 1250 EFLGDALIDMTIVEYLYRNFPLADPQWLTEHKMAMASNQFLGCLCVKLNLHHHLLFNTSQ 1309
Query: 212 LYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDV 271
+ + E + +E +E+G + F+L
Sbjct: 1310 FISKIRDYVAELEL----AEETARQEAKEDGTPMRMDFWL---------------NATTP 1350
Query: 272 PKALGDVFEALV 283
PKA D EAL+
Sbjct: 1351 PKAYADSIEALI 1362
>gi|320590575|gb|EFX03018.1| rnase3 domain containing protein [Grosmannia clavigera kw1407]
Length = 1246
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 82/279 (29%), Positives = 120/279 (43%), Gaps = 50/279 (17%)
Query: 17 EDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGV-YLRSCGIEGAMLFLQALNI 75
+ GK+ P P LGDK +ADV E++ G YL + L +QA++
Sbjct: 858 QKGKRTQLPTHHP-----------LGDKTIADVCEAMIGAAYLTTYEERNFDLAVQAVSA 906
Query: 76 LPQSKIDVHEA------LYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSF 129
+ +SK+ ++ Y P P CP A L + K + Y F+
Sbjct: 907 VVKSKLHPMQSYAEYYTAYKP-PGWQLCPSTAAQLH------MAVSIAKDLGYQFRFPRL 959
Query: 130 LLQALSHPTYNANRI---TTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAM 186
L A +HP+Y RI SYQRLEFLGDA++D + YL+ FS+ P +++ + AM
Sbjct: 960 LRSAFTHPSYP--RIYENLPSYQRLEFLGDALLDMAIVDYLFHKFSNKDPQWLTEHKMAM 1017
Query: 187 VNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRC 246
V+N A +V L H+H+L S + + + + E EE E E +
Sbjct: 1018 VSNQFLAFLSVSLGFHRHILSFSGEMRKQILEYVTKVE--------EERVRAESEAV--- 1066
Query: 247 LIFFLIEEKDVQTDVYGR--VVEYVDVPKALGDVFEALV 283
E + R V PKAL DV EA V
Sbjct: 1067 -------EAGRPASEFARDYWVHVTHPPKALADVLEAYV 1098
>gi|349603393|gb|AEP99241.1| Endoribonuclease Dicer-like protein, partial [Equus caballus]
Length = 223
Score = 91.7 bits (226), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/136 (39%), Positives = 80/136 (58%), Gaps = 20/136 (14%)
Query: 148 YQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLH 207
YQRLEFLGDAI+D+L+T +LYE+ SPG ++D+RSA+VNN FAS AV+ D HK+
Sbjct: 2 YQRLEFLGDAILDYLITKHLYEDPRQHSPGVLTDLRSALVNNTIFASLAVKYDYHKYFKA 61
Query: 208 DSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVE 267
SP L+ + F Q Q +N E +G ++ + +++ E
Sbjct: 62 VSPELFHVIDDFVQFQLEKN-----------EMQG---------MDSELRRSEEDEEKEE 101
Query: 268 YVDVPKALGDVFEALV 283
++VPKA+GD+FE+L
Sbjct: 102 DIEVPKAMGDIFESLA 117
>gi|325091272|gb|EGC44582.1| ATP-dependent helicase DCL1 [Ajellomyces capsulatus H88]
Length = 1432
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 104/219 (47%), Gaps = 23/219 (10%)
Query: 41 LGDKVVADVVESLTGVYLRSCG--------IEGAMLFLQALNIL---PQSKIDVHEALYG 89
LGDK +AD+ E+L G L S G ++ +F+ + N S ID++
Sbjct: 1097 LGDKTIADICEALIGASLLSGGKACRFDTAVKAVTVFVDSDNHRVSDWNSYIDLYSL--- 1153
Query: 90 PHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSY 148
PS A LD + Q+ R+ Y F L A +H +Y +A Y
Sbjct: 1154 --PSYQIVQADAGQLDLAK------QIGNRLGYHFTYPRLLRSAFTHASYPSAWSTVPCY 1205
Query: 149 QRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
QRLEFLGD+++D + YLY ++ P +++ + AMV+N + V+L LHKHLL+
Sbjct: 1206 QRLEFLGDSLLDMVCVEYLYHHYPDRDPQWLTEHKMAMVSNKFLGAVTVKLGLHKHLLYI 1265
Query: 209 SPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCL 247
S L+ +TR+A+ E E +D + +CL
Sbjct: 1266 SNALFGQITRYAEEIEVAVAESADSPDAWTTTSDPPKCL 1304
>gi|241896736|emb|CAZ65730.1| dicer-2 protein [Mucor circinelloides f. lusitanicus]
Length = 1608
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 119/256 (46%), Gaps = 50/256 (19%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGP--HPSAVRC 97
KL DK +AD+VE+ G S G+EG + L I P +I + + P S +
Sbjct: 1254 KLSDKTLADIVEASLGAAYLSNGLEGGLHAAIQLQI-PFDEIKTWDD-FKPTFEESRKQV 1311
Query: 98 PEQA-----RGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLE 152
P +A R LD +P+ T++ R F+ +++AL+H + N + YQRLE
Sbjct: 1312 PARAEVRALRSLD----LPKVTEIVGR---EFKTPLLIVEALTHASL-PNSTSPCYQRLE 1363
Query: 153 FLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
FLGDAI+DF+V YL+ + PG I+D++ + VNN + L++H++H S +L
Sbjct: 1364 FLGDAILDFMVIRYLFARYPDADPGIITDLKDSCVNNHILGIVCIETGLYRHIIHYSGKL 1423
Query: 213 YENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFL--IEEKDVQTDVYGRVVEYVD 270
+R + FF+ +EE + + G +
Sbjct: 1424 -------------------------------IRAIEFFVSEVEETKARGEAVGEYWVDFN 1452
Query: 271 VPKALGDVFEALVEDT 286
+PK L DV E+++ T
Sbjct: 1453 IPKVLSDVVESMLGAT 1468
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 12/129 (9%)
Query: 113 CTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
C Q +R + D + +L+A + P+ N + +Y+RLE LGD+++ F+ T LY NF
Sbjct: 1134 CRQSAERYDLPIDDAN-MLEAYTTPSAN---MEMNYERLETLGDSLLKFIATIRLYINFP 1189
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS-PRLYENVTRF---AQNQEA--- 225
+ GE+ +R ++ N A RL ++++ + R Y F A NQE
Sbjct: 1190 FSNEGELHHLRIRVICNRALYRSAKRLKFYRYVTSQAFNRRYWRPPGFTSPADNQETIDG 1249
Query: 226 -RNHEISDE 233
+ H++SD+
Sbjct: 1250 LKYHKLSDK 1258
>gi|225561826|gb|EEH10106.1| dicer-like protein [Ajellomyces capsulatus G186AR]
Length = 1502
Score = 91.3 bits (225), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 67/219 (30%), Positives = 105/219 (47%), Gaps = 23/219 (10%)
Query: 41 LGDKVVADVVESLTGVYLRSCG--------IEGAMLFLQALNIL---PQSKIDVHEALYG 89
LGDK +AD+ E+L G L S G ++ +F+ + N S ID++
Sbjct: 1167 LGDKTIADICEALIGASLLSGGKACRFDTAVKAVTVFVDSDNHRVSDWNSYIDLYSL--- 1223
Query: 90 PHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSY 148
PS A LD + Q+ R+ Y F L A +H +Y +A Y
Sbjct: 1224 --PSYQIAQADAGQLDLAK------QIGNRLGYYFTYPRLLRSAFTHASYPSAWSTVPCY 1275
Query: 149 QRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
QRLEFLGD+++D + +LY ++ P +++ + AMV+N + AV+L LHKHLL+
Sbjct: 1276 QRLEFLGDSLLDMVCVEHLYHHYPDRDPQWLTEHKMAMVSNKFLGAVAVKLGLHKHLLYI 1335
Query: 209 SPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCL 247
S L+ +TR+A+ E E +D + +CL
Sbjct: 1336 SNALFGQITRYAEEIEVAVAESADSPDAWTTTSDPPKCL 1374
>gi|392567716|gb|EIW60891.1| hypothetical protein TRAVEDRAFT_146565 [Trametes versicolor FP-101664
SS1]
Length = 1459
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/241 (31%), Positives = 114/241 (47%), Gaps = 46/241 (19%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARG 103
K + D +E+L G + GI+ A+ L + + GP P +R
Sbjct: 1059 KSMQDCMEALLGASFATGGIDMALHAGTVLGV----------SFGGPTPWNIRYGLLMPK 1108
Query: 104 LDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLV 163
+P P L++ + Y F+ LL+A++HP++ + ++SYQRLEFLGDA+ID +V
Sbjct: 1109 SEP---SPLFLTLQEALGYRFEHGQLLLEAVTHPSFGSAD-SSSYQRLEFLGDALIDMVV 1164
Query: 164 TAYLYENFSHLSPGEISDIRSAMVNNVTFASYAV-RLDLHKHLLHDSPRLYENVTRFAQN 222
T YLY+ F + G++S RS V AS AV RL LHK LL ++ L + R+
Sbjct: 1165 TEYLYKKFPEATSGQLSWARSRAVCGTALASLAVNRLGLHKLLLINNVELSIAIGRYVPI 1224
Query: 223 QEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEAL 282
E EI++EE + D + D PKAL DVFE++
Sbjct: 1225 LE----EITNEE----------------------IILDGWKH-----DPPKALSDVFESV 1253
Query: 283 V 283
+
Sbjct: 1254 M 1254
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 129 FLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
L+QAL+ P+ NA + QRLE LGDA++ +LY + H G++ ++ V
Sbjct: 950 LLVQALTLPSTNAQ---FNNQRLETLGDAVLKLSAVVHLYNKYPHRHEGQLDAMKRVSVA 1006
Query: 189 NVTFASYAVRLDLHKHL 205
N T + V L +HL
Sbjct: 1007 NRTLLARGVERSLERHL 1023
>gi|212529276|ref|XP_002144795.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
gi|210074193|gb|EEA28280.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
Length = 1497
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 61/171 (35%), Positives = 91/171 (53%), Gaps = 11/171 (6%)
Query: 41 LGDKVVADVVESLTGVYLRSCG-IEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCP- 98
LG+K +ADV E+L G L S G + + ++A+ L S + E+ G + S P
Sbjct: 1139 LGEKTIADVCEALIGASLLSGGPVNRFDMAVKAVTRLVNSDLHNVESWAG-YSSHYSLPS 1197
Query: 99 ---EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFL 154
++A G + Q++K++ Y F+ L A +HP+Y A I YQRLEFL
Sbjct: 1198 YQIKEANGFEK----DLANQIDKKLGYRFKYPRLLRSAFTHPSYPTAWSIVPCYQRLEFL 1253
Query: 155 GDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
GD+++D + LYE F P +++ + AMV+N S AVRLDLH HL
Sbjct: 1254 GDSLLDMVCIENLYERFPDRDPQWLTEHKMAMVSNKFLGSLAVRLDLHTHL 1304
>gi|449550119|gb|EMD41084.1| hypothetical protein CERSUDRAFT_131598, partial [Ceriporiopsis
subvermispora B]
Length = 1587
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/180 (36%), Positives = 94/180 (52%), Gaps = 14/180 (7%)
Query: 36 LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI----LPQSKIDVHEALYGPH 91
+D LGDKV ADVVE++ G S G E A+ + LN+ + Q A +
Sbjct: 1218 MDVQWLGDKVCADVVEAIIGAAYLSGGQEVALRAAKVLNVGMTDIEQWSDFARRATFITD 1277
Query: 92 PSAVRCPEQARG-LDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQR 150
P A RG L+ LR + E + F+ LLQAL+H + + +Y R
Sbjct: 1278 PPAST--RTHRGFLEMLRAV------EGIVGCRFEKPHLLLQALTHASIRGYEVL-NYDR 1328
Query: 151 LEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSP 210
LEFLGDAI+DFLV Y+YE +LS G ++ ++ AMV+N A++ V L ++ LH SP
Sbjct: 1329 LEFLGDAILDFLVIRYVYERHHNLSSGGLTLLKVAMVSNHVLAAFCVYCGLWQYALHASP 1388
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%), Gaps = 3/72 (4%)
Query: 130 LLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
LL AL P+ +A Y+RLEFLGDA + +L + Y + + G + R ++N
Sbjct: 968 LLPALFPPSADAE---FDYERLEFLGDAYLKYLSSTYCFVTMPRKNEGALHYARQRYISN 1024
Query: 190 VTFASYAVRLDL 201
+ +VRL L
Sbjct: 1025 KALRTGSVRLGL 1036
>gi|115292171|emb|CAK32533.1| putative dicer-like protein [Mucor circinelloides]
Length = 1529
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 105/215 (48%), Gaps = 24/215 (11%)
Query: 21 KVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSC---GIEGAMLFLQALN--- 74
K S E + S +Y+ KL DK +ADVVES G SC +G +AL+
Sbjct: 1154 KDDSAEMIKSLTYH-----KLSDKTLADVVESTLGASYLSCLGDKKQGDQALNEALHTTQ 1208
Query: 75 --ILPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIP------ECTQLEKRINYTFQD 126
++P K++ + + R + L Y P + ++ + + Y FQ+
Sbjct: 1209 RLLVPMQKMEQ----WSDFQTIYRDERDNKQLKMAAYDPLFDQRIDIKKVSRILGYEFQN 1264
Query: 127 KSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAM 186
++ + +AL+H + N YQRLEFLGDA++DF VT YL+E + PG + D+R +
Sbjct: 1265 EALIAEALTHASV-TNSSVPCYQRLEFLGDAVLDFCVTNYLFEKYHTAPPGTLHDLRKSS 1323
Query: 187 VNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQ 221
VNN + ++L LH H+ H S V +F +
Sbjct: 1324 VNNDILSVLCIQLGLHVHIRHFSTTFPSAVKQFQE 1358
Score = 45.1 bits (105), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 129 FLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
++L+A T ++ + YQRLEFLGD+++ F+ + Y++ + E+++ R M++
Sbjct: 1063 YMLEAF---TASSAGLEKDYQRLEFLGDSVLKFITSTYVFVTLPISNEFELTESRMRMIS 1119
Query: 189 NVTFASYAVRLDLHKHLLHDS-PRLY 213
N A++L L++++ + PR +
Sbjct: 1120 NTALFKSAIQLRLYEYICSQNLPRRF 1145
>gi|449682783|ref|XP_002165718.2| PREDICTED: endoribonuclease Dicer-like [Hydra magnipapillata]
Length = 1001
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 55/159 (34%), Positives = 87/159 (54%), Gaps = 20/159 (12%)
Query: 124 FQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIR 183
F +KS L+QA +H +Y +N +T YQ+ EFLGDAI+DFL+T ++ N +LSPG+++ R
Sbjct: 769 FLNKSHLIQAFTHLSYLSNSVTGCYQQYEFLGDAILDFLITLHIQSNTQNLSPGQLTYFR 828
Query: 184 SAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGI 243
SA+VNN TF A++ +K++ S L+ + F + + +H + DE E
Sbjct: 829 SAVVNNNTFGLLAIKHSFYKYIYSSSNELFSSYNSFIEIVK-DDHGLKDEYFESP----- 882
Query: 244 VRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEAL 282
F+I + E PK LGD+FE++
Sbjct: 883 ------FVICPTGSE--------EGYQAPKVLGDLFESV 907
>gi|302896162|ref|XP_003046961.1| hypothetical protein NECHADRAFT_95309 [Nectria haematococca mpVI
77-13-4]
gi|256727889|gb|EEU41248.1| hypothetical protein NECHADRAFT_95309 [Nectria haematococca mpVI
77-13-4]
Length = 1452
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 122/250 (48%), Gaps = 29/250 (11%)
Query: 38 RIKLGDKVVADVVESLTGV-YLRSCGIEGAM-LFLQALNILPQSKIDVHEALYGPHPSAV 95
R L DK +ADV E+L G YL G G+M L ++A+ + +SK E + + +A
Sbjct: 1080 RHNLADKSIADVCEALIGAAYLSGKG--GSMDLAVKAVTRMVKSKNHKMEK-FEDYFAAF 1136
Query: 96 RCP--EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEF 153
+ P +QA R + +C + + Y F+ + L A HP++ + + +YQRLEF
Sbjct: 1137 KMPAWQQAEANVNQRRLVDC--VADAVGYRFKWPALLRSAFKHPSWPYDPVP-NYQRLEF 1193
Query: 154 LGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLY 213
LGDA++D + L++ F P +++ + AM +N V+LDLHKHL + L
Sbjct: 1194 LGDALLDMAIVDNLFQRFPQADPQWLTEHKMAMASNQFLGCLCVKLDLHKHLTSTTSSLI 1253
Query: 214 ENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPK 273
++ +A E+++E+ +E + + ++ D + R PK
Sbjct: 1254 GQISSYASEL-----ELAEEDARQEAKAN-----------KTAMRKDFWLRASA---PPK 1294
Query: 274 ALGDVFEALV 283
A DV EALV
Sbjct: 1295 AFADVMEALV 1304
>gi|328773741|gb|EGF83778.1| hypothetical protein BATDEDRAFT_85615 [Batrachochytrium dendrobatidis
JAM81]
Length = 1746
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/262 (27%), Positives = 118/262 (45%), Gaps = 44/262 (16%)
Query: 29 PSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVH---- 84
P++S + LD K +D +E+L G Y CG+E A+ ++ ++ ++I H
Sbjct: 1397 PTASVDCLDNRVFCGKKQSDFIEALLGAYFLECGVEAALHLMRTFRLI--NEIPPHCFRH 1454
Query: 85 ---EALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNA 141
L+ S+++ P +R LD ++++++Y F + LL AL P Y
Sbjct: 1455 GDTNKLHDHQISSMQNPILSR-LDQ----ETVDHVQQKLSYNFHNPELLLIALMTPFY-- 1507
Query: 142 NRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
+ + ++RLEFLGDAI+D LV Y Y ++ H P +S + A V F V L L
Sbjct: 1508 -FVKSKFERLEFLGDAIMDILVARYFYRHYKHADPCSLSKMIQATVCKPAFCKILVSLKL 1566
Query: 202 HKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDV 261
H+HLL S + + +E IV L I+ Q
Sbjct: 1567 HEHLLQSS------------------------QLSQHSKEAIV--LYANYIQNSHSQ-HA 1599
Query: 262 YGRVVEYVDVPKALGDVFEALV 283
+ + + +D PK L DVFE +V
Sbjct: 1600 FKQADKAIDGPKVLCDVFEVIV 1621
Score = 44.7 bits (104), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%), Gaps = 3/62 (4%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S L+ A + P N+ T+Y+RLE LGD ++ F V YL+ ++ G++S I S +V
Sbjct: 1298 STLMSAFTTPAANS---ITNYERLETLGDKVLKFGVAHYLHSSYQSYEVGQLSTILSGLV 1354
Query: 188 NN 189
+N
Sbjct: 1355 SN 1356
>gi|429848709|gb|ELA24159.1| RNase3 domain protein [Colletotrichum gloeosporioides Nara gc5]
Length = 1561
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 57/169 (33%), Positives = 92/169 (54%), Gaps = 5/169 (2%)
Query: 41 LGDKVVADVVESLTGV-YLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPE 99
L DK +ADV E+L G YL + + ++A+ + + K + +G + + R PE
Sbjct: 1192 LADKSIADVCEALIGAAYLSYADSDNYDMAIRAVTAMVKEKTHRMTS-WGDYVAGYRHPE 1250
Query: 100 -QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLGDA 157
Q R P++ Q+E+ + Y F+ + L A HP+Y A YQRLEFLGDA
Sbjct: 1251 WQFRKPTPIQR-DMAQQVEESMGYKFKSPALLRSAFHHPSYPRAYESLPDYQRLEFLGDA 1309
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
++D + +L+ F + P +++ + AMV+N AS +V+L LHKH+L
Sbjct: 1310 LLDMVCVDFLFNKFPNADPQWLTEHKMAMVSNQFLASLSVKLGLHKHIL 1358
>gi|395330301|gb|EJF62685.1| hypothetical protein DICSQDRAFT_104190 [Dichomitus squalens LYAD-421
SS1]
Length = 1453
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/164 (36%), Positives = 86/164 (52%), Gaps = 15/164 (9%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARG 103
+ + D +E++ G + GI+ A+ AL + + GP P VR +
Sbjct: 1061 RSLQDCMEAILGASFATGGIDMALRAGTALGL----------SFGGPTPWYVR---YSGR 1107
Query: 104 LDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLV 163
L P L++ + YTF+ LL+A++HP++ + +SYQRLEFLGDA ID +V
Sbjct: 1108 LKEAPAAPLFAGLQETLGYTFKHGHLLLEAITHPSFRSTD-CSSYQRLEFLGDAFIDMVV 1166
Query: 164 TAYLYENFSHLSPGEISDIRSAMVNNVTFASYAV-RLDLHKHLL 206
T YLY F + G++S RS V FAS AV RL LHK LL
Sbjct: 1167 TEYLYRKFPSATSGQLSWARSRAVCGPAFASIAVKRLALHKLLL 1210
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 129 FLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
L+QA++ P+ NA + QRLE GDA++ +LY + H G++ +++ +
Sbjct: 952 LLVQAITLPSANAG---FNNQRLETFGDAVLKLCAVVHLYNRYPHRHEGQLDNMKRTAIA 1008
Query: 189 NVTFASYAVRLDLHKHLLHD--SPRLYENV 216
N T + A+ L +HL + S RL+ V
Sbjct: 1009 NRTLLARALEHGLEEHLTPETQSIRLWRYV 1038
>gi|299747526|ref|XP_001837094.2| hypothetical protein CC1G_00230 [Coprinopsis cinerea okayama7#130]
gi|298407559|gb|EAU84711.2| hypothetical protein CC1G_00230 [Coprinopsis cinerea okayama7#130]
Length = 1499
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 123/245 (50%), Gaps = 32/245 (13%)
Query: 41 LGDK-VVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPE 99
LGDK +ADV E++ G S G E A+ +AL+I P I+ L V P
Sbjct: 1144 LGDKKAIADVTEAIIGAAYVSGGRETALDVAKALSI-PIPGINTWSDLG----MQVVIPF 1198
Query: 100 QARGLDPLRYIPECTQ-LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAI 158
D + P + +E I + FQ L Q L+H + + +++ T Y+RLEF+GDAI
Sbjct: 1199 TT---DAIELRPGSIEAVEGIIGHRFQQPHLLAQILTHTSVHGSKVLT-YERLEFIGDAI 1254
Query: 159 IDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTR 218
+DF+V ++++ LSPG ++ ++ AMV N T A+ + ++KHL+ S +L +
Sbjct: 1255 LDFMVIRHIFDRERTLSPGGLTMLKGAMVANSTLATVCILSGIYKHLVFGSYQLSSAIED 1314
Query: 219 FAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDV 278
+A EA N E +D+E E+E + G+ ++ PKAL DV
Sbjct: 1315 YA---EAIN-ERADKEYALAEQE-----------------NRMPGQFWPDIEPPKALSDV 1353
Query: 279 FEALV 283
E+++
Sbjct: 1354 IESII 1358
>gi|167046026|gb|ABZ10544.1| dicer-like protein C [Placozoa sp. DMJ-2008]
Length = 352
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 61/245 (24%), Positives = 115/245 (46%), Gaps = 24/245 (9%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPE 99
K K +ADV++++ L A F+ L+ + I+ A P + E
Sbjct: 113 KFSSKSIADVMKAILAAILLEFDERHAKYFISWLDKDIKFTINASAASLLPDDDDISSNE 172
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITT-SYQRLEFLGDAI 158
++ + +LEK I Y+FQ+K F+++AL+H +Y+ + I S Q+LEFLGD I
Sbjct: 173 ----INEIYEANNLERLEKVIGYSFQNKLFMIRALTHSSYHHHNIAIESNQKLEFLGDTI 228
Query: 159 IDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTR 218
+ +++ + + + P ++ D + A+VNN A + + + K++ +SP L+ ++ +
Sbjct: 229 LQYIIARHFFNSHPDAKPAKLHDFQEAIVNNKCLADIGIAIGVSKYIFQESPDLFRDINQ 288
Query: 219 FAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDV 278
F + ++ I DE + E + + E V +PK + DV
Sbjct: 289 FVKIITC-DYMIDDEMNYNDRTEAL------------------FENFTEEVKIPKPMSDV 329
Query: 279 FEALV 283
EAL+
Sbjct: 330 VEALI 334
>gi|167046024|gb|ABZ10543.1| dicer-like protein C [Trichoplax adhaerens]
Length = 358
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 116/245 (47%), Gaps = 24/245 (9%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPE 99
K K +ADV++++ L A F+ L+ + I+ A P + E
Sbjct: 119 KFSSKSIADVMKAILAAILLEFDERHAKYFISWLDKDIKFTINASAASLLPDDDNISSNE 178
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITT-SYQRLEFLGDAI 158
++ + +LEK I Y+FQ+K F+++AL+H +Y+ + I S Q+LEFLGD I
Sbjct: 179 ----INKIYETNNLERLEKVIGYSFQNKLFMIRALTHSSYHHHDIAIESNQKLEFLGDTI 234
Query: 159 IDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTR 218
+ +++ + + + P ++ D + A+VNN A + + + K++ +SP L+ ++ +
Sbjct: 235 LQYIIARHFFNSHPDAKPAKLHDFQEAIVNNKCLAVIGIAIGVSKYVFQESPDLFRDIDQ 294
Query: 219 FAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDV 278
FA+ ++ I DE + E + + E V +PK + DV
Sbjct: 295 FAKIITC-DYMIDDEMNYNDRTEAL------------------FENFTEEVKIPKPVSDV 335
Query: 279 FEALV 283
EAL+
Sbjct: 336 VEALI 340
>gi|384500232|gb|EIE90723.1| hypothetical protein RO3G_15434 [Rhizopus delemar RA 99-880]
Length = 1239
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 113/248 (45%), Gaps = 32/248 (12%)
Query: 36 LDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAV 95
L + KL DK +AD+VE+ G S G+EG + + I P +I+ +
Sbjct: 880 LKKHKLSDKTLADIVEASLGAAYLSSGLEGCLHTAIQMQI-PFDQIEKWSDFNVAFEESR 938
Query: 96 RCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLG 155
+ + LR + + +++ ++ F +++AL+H + N + YQRLEFLG
Sbjct: 939 KAVPPRAEVKALRML-DLPKIQVLVDREFNKPLLVVEALTHASL-PNSTSPCYQRLEFLG 996
Query: 156 DAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYEN 215
DAI+DFLV YLY + PG+I+ ++ + VNN + LHKH++H S +L
Sbjct: 997 DAILDFLVIRYLYTKYPDAEPGQITTLKDSCVNNHVLGIICLNNGLHKHIIHYSGKLVRA 1056
Query: 216 VTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKAL 275
+ +EE +E ++ G G +++PK L
Sbjct: 1057 INTL------------EEEVQELKDTG-----------------KAVGEYWADMNIPKVL 1087
Query: 276 GDVFEALV 283
DV E+++
Sbjct: 1088 SDVVESML 1095
Score = 47.8 bits (112), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 58/113 (51%), Gaps = 11/113 (9%)
Query: 129 FLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
++L+A + P+ + + Y+RLE LGD+++ F+ T LY NF + GE+ +R +V
Sbjct: 779 YMLEAYTMPSAS---MEMDYERLETLGDSLLKFIATIRLYINFPFSNEGELHHLRIRVVC 835
Query: 189 NVTFASYAVRLDLHKHLL-------HDSPRLYENVTRFAQNQEA-RNHEISDE 233
N A RL ++++ H P + + A E+ + H++SD+
Sbjct: 836 NRALYRAAKRLKFYRYVTSQAFNRRHWRPPHFTSTADNADTMESLKKHKLSDK 888
>gi|336386278|gb|EGO27424.1| hypothetical protein SERLADRAFT_446652 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1267
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/243 (30%), Positives = 126/243 (51%), Gaps = 29/243 (11%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
LGDK +ADVVE++ G S G + A+ + L+I P I+ H A +G A+ P +
Sbjct: 888 LGDKAIADVVEAIIGAAYISGGRDLALTTAKTLDI-PIRNIE-HWADFGR--KALTPPPR 943
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
LR +E I + F L QAL+H + + +T Y+RLEF+GDAI++
Sbjct: 944 VTA--KLR-DGSIEAVETIIGHKFAYPHLLAQALTHASVQGYQ-STCYERLEFIGDAILE 999
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
F+V +++ +SPG ++ ++ AMV+N A+ V LH+H+L++S L N+ +
Sbjct: 1000 FMVIRHIFNRDDKMSPGVLTLMKGAMVSNSALAAVCVWSGLHEHILYESFPLAGNIQGYI 1059
Query: 221 QNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFE 280
DE ++++ EE + + ++ +T G+ V+ PKAL DV E
Sbjct: 1060 -----------DELKKKQTEE--------YELAAREQRTP--GQFWLDVEPPKALSDVVE 1098
Query: 281 ALV 283
+++
Sbjct: 1099 SII 1101
>gi|336373452|gb|EGO01790.1| hypothetical protein SERLA73DRAFT_85682 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1354
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 75/243 (30%), Positives = 126/243 (51%), Gaps = 29/243 (11%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
LGDK +ADVVE++ G S G + A+ + L+I P I+ H A +G A+ P
Sbjct: 983 LGDKAIADVVEAIIGAAYISGGRDLALTTAKTLDI-PIRNIE-HWADFGR--KALTPP-- 1036
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
R LR +E I + F L QAL+H + + +T Y+RLEF+GDAI++
Sbjct: 1037 PRVTAKLRD-GSIEAVETIIGHKFAYPHLLAQALTHASVQGYQ-STCYERLEFIGDAILE 1094
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
F+V +++ +SPG ++ ++ AMV+N A+ V LH+H+L++S L N+ +
Sbjct: 1095 FMVIRHIFNRDDKMSPGVLTLMKGAMVSNSALAAVCVWSGLHEHILYESFPLAGNIQGYI 1154
Query: 221 QNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFE 280
DE ++++ EE + + ++ +T G+ V+ PKAL DV E
Sbjct: 1155 -----------DELKKKQTEE--------YELAAREQRTP--GQFWLDVEPPKALSDVVE 1193
Query: 281 ALV 283
+++
Sbjct: 1194 SII 1196
>gi|63054443|ref|NP_588215.2| dicer [Schizosaccharomyces pombe 972h-]
gi|1351642|sp|Q09884.1|DCR1_SCHPO RecName: Full=Protein Dicer; AltName: Full=Cell cycle control protein
dcr1; AltName: Full=RNA interference pathway protein
dcr1; Includes: RecName: Full=Endoribonuclease dcr1;
Includes: RecName: Full=ATP-dependent helicase dcr1
gi|157310516|emb|CAB41233.2| dicer [Schizosaccharomyces pombe]
Length = 1374
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 104/191 (54%), Gaps = 15/191 (7%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI--LPQSKIDVHEALYGPHPSAVRC 97
KL K +AD+VE+ G L G++ A+ ++L++ L S D + + A
Sbjct: 1016 KLSVKRIADMVEASIGACLLDSGLDSALKICKSLSVGLLDISNWDEWNNYFDLNTYA--- 1072
Query: 98 PEQARGLDPLRYI--PECTQLEKRINYTFQDKSFLLQALSHPTYNANR-ITTSYQRLEFL 154
D LR + P + +E+ I Y+F++K L A HP+ + + I +YQ+LEFL
Sbjct: 1073 -------DSLRNVQFPYSSYIEETIGYSFKNKKLLHLAFIHPSMMSQQGIYENYQQLEFL 1125
Query: 155 GDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYE 214
GDA++D+++ YLY+ + + + GE++D +S V N + + L+LHK++ H+S + +
Sbjct: 1126 GDAVLDYIIVQYLYKKYPNATSGELTDYKSFYVCNKSLSYIGFVLNLHKYIQHESAAMCD 1185
Query: 215 NVTRFAQNQEA 225
+ + + EA
Sbjct: 1186 AIFEYQELIEA 1196
>gi|195997771|ref|XP_002108754.1| hypothetical protein TRIADDRAFT_18215 [Trichoplax adhaerens]
gi|190589530|gb|EDV29552.1| hypothetical protein TRIADDRAFT_18215 [Trichoplax adhaerens]
Length = 1018
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 116/245 (47%), Gaps = 24/245 (9%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPE 99
K K +ADV++++ L A F+ L+ + I+ A P + E
Sbjct: 745 KFSSKSIADVMKAILAAILLEFDERHAKYFISWLDKDIKFTINASAASLLPDDDNISSNE 804
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITT-SYQRLEFLGDAI 158
++ + +LEK I Y+FQ+K F+++AL+H +Y+ + I S Q+LEFLGD I
Sbjct: 805 ----INKIYETNNLERLEKVIGYSFQNKLFMIRALTHSSYHHHDIAIESNQKLEFLGDTI 860
Query: 159 IDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTR 218
+ +++ + + + P ++ D + A+VNN A + + + K++ +SP L+ ++ +
Sbjct: 861 LQYIIARHFFNSHPDAKPAKLHDFQEAIVNNKCLAVIGIAIGVSKYVFQESPDLFRDIDQ 920
Query: 219 FAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDV 278
FA+ ++ I DE + E + + E V +PK + DV
Sbjct: 921 FAKIITC-DYMIDDEMNYNDRTEAL------------------FENFTEEVKIPKPVSDV 961
Query: 279 FEALV 283
EAL+
Sbjct: 962 VEALI 966
>gi|356571230|ref|XP_003553782.1| PREDICTED: endoribonuclease Dicer homolog 2-like [Glycine max]
Length = 756
Score = 88.6 bits (218), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/173 (31%), Positives = 98/173 (56%), Gaps = 16/173 (9%)
Query: 39 IKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCP 98
I LG ++ADVVE+L G ++ + + A+ F+ + I + I +E ++ P
Sbjct: 448 IDLG--IIADVVEALIGAFISTEDEKAALSFINWIGINVDTNIMPYE---NERHISIIAP 502
Query: 99 EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAI 158
E+ + + L+ R+NY+F+D L++AL+H + I T Y+RLEFLGDA+
Sbjct: 503 EE---------LVKAKLLKSRLNYSFKDPYLLVEALTHSSGKRPEIRTCYERLEFLGDAV 553
Query: 159 IDFLVTAYLYENFSH--LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
+D+++T + Y+ +S+ S +++RS VNN +A A++ L +H+L DS
Sbjct: 554 LDYVITMHFYKEYSNDKFSAEFFTNMRSISVNNECYALSAIKAKLDEHILCDS 606
>gi|353227266|emb|CCA77779.1| hypothetical protein PIIN_03414 [Piriformospora indica DSM 11827]
Length = 1418
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 121/254 (47%), Gaps = 48/254 (18%)
Query: 31 SSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGP 90
+S +F++R+ + + V D +E+L GV S G + + L + G
Sbjct: 1024 NSRSFVERV-IPRRSVQDCMEALLGVAWLSGGDKAGLRVGTRLGL----------CFGGT 1072
Query: 91 HPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQR 150
P A R P+ P LE+ + YTF+DKS L++AL+HP++ + + SYQR
Sbjct: 1073 VPWAERYPKVELAFSSSSPFPP---LEENLGYTFKDKSLLVEALTHPSFVSG--SASYQR 1127
Query: 151 LEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAV-RLDLHKHLLHDS 209
LEFLGDA++D + + + + + + G+++ R+ V N T ++ +L++HK + D+
Sbjct: 1128 LEFLGDAVLDLVTVEHFFHLYPNATSGKLTRARARCVCNSTLSALGTKKLEIHKAMFCDA 1187
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
L A N+ AR +F ++ V +++ +
Sbjct: 1188 ISLVA-----AANKTAR---------------------MFNSMDFTQVIDNIW-----RL 1216
Query: 270 DVPKALGDVFEALV 283
D PKALGD+ EAL+
Sbjct: 1217 DAPKALGDMVEALI 1230
>gi|403418950|emb|CCM05650.1| predicted protein [Fibroporia radiculosa]
Length = 1373
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 110/248 (44%), Gaps = 39/248 (15%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQAL--NILPQSKIDVHEALYGPHPSAVRCP 98
LGDK VADVVE++ G S G A+ ++ L NI + L+ S P
Sbjct: 1009 LGDKTVADVVEAIIGAAYLSGGQRIALQTMKVLSVNIPGVEQWSDFSRLFTSQTSPSTVP 1068
Query: 99 EQARGLDPLRYIPECT--QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGD 156
+P T +E + F L QAL+H + A+ T Y RLEF+GD
Sbjct: 1069 -----------LPTATVRAVETIVGNVFARPQLLAQALTHTSIGAHDDRT-YDRLEFVGD 1116
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENV 216
A++DFLV ++Y+ LSP ++ ++SAMV+N A++ V LH HL H +P + V
Sbjct: 1117 AVLDFLVVQFIYDRNPGLSPNGLTLLKSAMVSNHALAAFCVHSGLHIHLRHAAPEVGTAV 1176
Query: 217 TRFAQN-QEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKAL 275
+ + E R E + E + G+ +D PK L
Sbjct: 1177 QVYVRKLGEVREKEYRLAQSERR----------------------LPGQYWLALDPPKTL 1214
Query: 276 GDVFEALV 283
DV E+++
Sbjct: 1215 SDVVESVI 1222
Score = 38.9 bits (89), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/105 (22%), Positives = 51/105 (48%), Gaps = 5/105 (4%)
Query: 130 LLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
L+ AL+ P+ + + Y+RLE GDA + ++ + Y + H+ G + R +++N
Sbjct: 874 LIAALTPPSAS---VAFDYERLELFGDAFLKYVASIYCFVTTPHVREGALHMARQKIISN 930
Query: 190 VTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEE 234
+ A R+ L + + P + + T +R+ I+D++
Sbjct: 931 KALLTGANRIGLPPY-IQSKPFVAKTWTPITSPHSSRD-PINDQK 973
>gi|296424770|ref|XP_002841919.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638171|emb|CAZ86110.1| unnamed protein product [Tuber melanosporum]
Length = 1402
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/179 (29%), Positives = 87/179 (48%), Gaps = 29/179 (16%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYG---------- 89
+L DK ++DV E+L G L G++GA + A+ P+ V Y
Sbjct: 1052 RLADKSISDVCEALIGAALIDKGLDGATQIVTAILRTPEHSQKVWADYYNCYTKPAYQLQ 1111
Query: 90 -PHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPT--YNANRITT 146
P PS +R E +E+ + Y F+ L+ AL+HP+ + +R+
Sbjct: 1112 EPSPSHIRVAED---------------IEELVGYKFKHPRLLISALTHPSLPFTWDRVP- 1155
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
SYQRLEFLGDA++D + Y+++ + H P +++ + AMV+N AV + H+ L
Sbjct: 1156 SYQRLEFLGDAVLDLVCVRYMFQKYPHADPQWLTEHKMAMVSNKFLGMVAVEMGFHRKL 1214
>gi|403179647|ref|XP_003337961.2| hypothetical protein PGTG_19538 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375165151|gb|EFP93542.2| hypothetical protein PGTG_19538 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1460
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 134/281 (47%), Gaps = 54/281 (19%)
Query: 10 DLYQDP-TEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAML 68
D ++DP TEDGK+ LP+ +++ K+ +V++DVVE+L G + GIE +
Sbjct: 1025 DRFRDPQTEDGKE------LPNGNFSR----KIPKRVLSDVVEALLGAGFLTGGIELGLK 1074
Query: 69 FLQALNIL-----PQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYT 123
AL++ P S+ V+ L A L+P + +C LE++I Y
Sbjct: 1075 IGTALDLCFGGTAPWSERPVNIGLESITHDA---------LEPSTLL-KCQALEEKIGYV 1124
Query: 124 FQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIR 183
F++K L+QAL+H + N+ +T Y+R E+LGDA+ID + + Y+ F H + E++ R
Sbjct: 1125 FKEKLLLVQALTHRSANSF-MTNCYEREEWLGDAVIDMWIVEHAYKRFDHATAEELTLAR 1183
Query: 184 SAMVNNVTFASYAV-RLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEG 242
+ +V+N + A+ +L L + ++H S E E+ E
Sbjct: 1184 AKVVSNGSLGFLALKKLGLQEIIMHAS-----------------------ENFEQACTEA 1220
Query: 243 IVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
I F IEE D + D PK L DV EA+V
Sbjct: 1221 IEAIKPFAKIEEYFSTID---NLFVVFDPPKILNDVLEAIV 1258
Score = 42.4 bits (98), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 56/117 (47%), Gaps = 9/117 (7%)
Query: 112 ECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+ T L KR+++ +QAL+ P + YQ LE LGDA + + ++Y
Sbjct: 927 QATTLFKRLDFPTISLLHGIQALTPP---GGGVPWDYQTLETLGDAFLKLATSVHVY--L 981
Query: 172 SHLSPGE--ISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEAR 226
SHL GE +S +RS V+N A++ +L +L S R + R Q ++ +
Sbjct: 982 SHLKKGEGDMSHVRSRSVDNAYLRRKAIQANLPASIL--SQRFRTDRFRDPQTEDGK 1036
>gi|322704697|gb|EFY96289.1| Dicer-like protein 1 [Metarhizium anisopliae ARSEF 23]
Length = 1476
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 115/244 (47%), Gaps = 27/244 (11%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPE 99
+L DK +ADV E+L G + EG L ++A+ ++ QSK + + V+
Sbjct: 1126 RLADKSIADVCEALIGAAYMT-EPEGMDLAVKAVTVMVQSKNHRMKKYSDYYEKYVQPAW 1184
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAII 159
Q P+ + +++ I Y F+ L A HP+Y +YQRLEFLGDA++
Sbjct: 1185 QTIPSRPIELL-AVGKVKASIGYNFRSPKLLRSAFKHPSYPYEPELPNYQRLEFLGDALL 1243
Query: 160 DFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
D + +L++ + P +++ + AM +N F+ V L LH+H+L + ++ F
Sbjct: 1244 DVAIVDFLFQRYPLADPQWLTEHKMAMASNHFFSFLCVELGLHRHILSTGSSIMGHIAGF 1303
Query: 220 AQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVF 279
+ E+ + + E+G+++ L F+L E PKAL D+
Sbjct: 1304 VEQI---------EKAKSQTEDGVLQ-LDFWLNTEHP---------------PKALSDIL 1338
Query: 280 EALV 283
EA+V
Sbjct: 1339 EAVV 1342
>gi|358366696|dbj|GAA83316.1| hypothetical protein AKAW_01431 [Aspergillus kawachii IFO 4308]
Length = 1404
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 102/200 (51%), Gaps = 10/200 (5%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKIDVHEALYGPHPSAVRCPE 99
L +K +ADV E+L G L S G E + ++A+ L S + E + + S P+
Sbjct: 1050 LAEKTIADVCEALIGASLLSGGPEHRFDMAVKAVTTLVNSPSHMAER-WKDYISLYTIPK 1108
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLGDAI 158
R I C ++E++++Y F+ + L A +HP+Y +A YQRLEFLGD++
Sbjct: 1109 YQRRAADGAEIHLCRKVEEKLSYRFRYPTLLGSAFTHPSYPSAWAKVPCYQRLEFLGDSL 1168
Query: 159 IDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTR 218
ID + L+ + P +++ + AMV+N + AV+L LH HL + S L +T+
Sbjct: 1169 IDMVCVEDLFARYPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLKYFSAPLQSQITQ 1228
Query: 219 FAQNQEARNHEISDEEEEEE 238
+A+ EI E E E
Sbjct: 1229 YAE-------EIQTAEGESE 1241
>gi|242763899|ref|XP_002340666.1| RNA helicase/RNAse III, putative [Talaromyces stipitatus ATCC 10500]
gi|218723862|gb|EED23279.1| RNA helicase/RNAse III, putative [Talaromyces stipitatus ATCC 10500]
Length = 1494
Score = 87.8 bits (216), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/191 (33%), Positives = 96/191 (50%), Gaps = 13/191 (6%)
Query: 41 LGDKVVADVVESLTGVYLRSCG-IEGAMLFLQALNILPQSKIDVHEA-LYGPHPSAVRCP 98
LG+K +ADV E+L G L S G + + ++A+ L S D H + + S P
Sbjct: 1134 LGEKTIADVCEALIGASLLSGGPVNRFDMAVKAVTALVNS--DHHNVDNWAEYSSRYSLP 1191
Query: 99 ----EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEF 153
++A G + Q+E ++ Y FQ L A +HP+Y +A YQRLEF
Sbjct: 1192 PYQIKEADGFEK----DLARQVEMKLGYCFQYPKLLRSAFTHPSYPSAWSTVPCYQRLEF 1247
Query: 154 LGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLY 213
LGD+++D + LYE F P +++ + AMV+N S AVRL LH HL + S L
Sbjct: 1248 LGDSLLDMVCVEDLYERFPDRDPQWLTEHKMAMVSNKFLGSLAVRLSLHTHLQYFSNPLQ 1307
Query: 214 ENVTRFAQNQE 224
+ R Q+ +
Sbjct: 1308 AQIARAVQDSQ 1318
>gi|395330621|gb|EJF63004.1| hypothetical protein DICSQDRAFT_83832 [Dichomitus squalens LYAD-421
SS1]
Length = 1330
Score = 87.4 bits (215), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 59/185 (31%), Positives = 98/185 (52%), Gaps = 4/185 (2%)
Query: 37 DRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVR 96
+ + +GDK++ADVVE++ S G E A+ + L + P + + Y +
Sbjct: 942 NTLWMGDKIIADVVEAILAASFLSGGHEVALEAARRLQV-PIPNV-AQWSDYARLAAHHA 999
Query: 97 CPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGD 156
EQ + + LEK N F L QAL+H + + TSY RLEF+GD
Sbjct: 1000 AREQTVVMASAPSRMTISVLEKLFNSKFNRLDLLGQALTHTSAFSGAEGTSYDRLEFIGD 1059
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRS--AMVNNVTFASYAVRLDLHKHLLHDSPRLYE 214
AI+DFLV+ Y++E +LSPG ++ +++ AMV+N T A++ V + L ++L +S L
Sbjct: 1060 AILDFLVSRYIWERHPYLSPGGLTMLKANGAMVSNQTLAAFCVHVGLQQYLRMESKDLST 1119
Query: 215 NVTRF 219
+ ++
Sbjct: 1120 AIQKY 1124
Score = 40.4 bits (93), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Query: 130 LLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
LL ALS P A +Y+RLEFLGD+ + + + + Y + G++ R ++++N
Sbjct: 812 LLIALSTP---AAWTEFNYERLEFLGDSFLKVVASNFCYATMPSVHVGDLHQARQSIISN 868
Query: 190 VTFASYAVRLDLHKHLLH 207
A R+ + ++ H
Sbjct: 869 KVLQEGATRVGVPSYVQH 886
>gi|402217569|gb|EJT97649.1| ribonuclease III [Dacryopinax sp. DJM-731 SS1]
Length = 1400
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 58/182 (31%), Positives = 96/182 (52%), Gaps = 6/182 (3%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPE 99
+LGDK VADV E++ G + E A+ L LP +++ + L H E
Sbjct: 1032 ELGDKSVADVAEAVLGAAWLTGQREMALYVCHILG-LPMTRMGSWDFLRD-HAHIFFHEE 1089
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAII 159
G PL P+ +E + + F++ AL+H + ++ Y+RLEF+GDAI+
Sbjct: 1090 LDIG--PLSQ-PKVEAVEAILGHKFKNPFLAATALTHSSMSSTDFPC-YERLEFIGDAIL 1145
Query: 160 DFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
DF+ LY + L G ++ ++ A+V+N A++ V L LH +++HDSP L E V+ +
Sbjct: 1146 DFVTVRLLYMRWGELHEGWLTMLKGAIVSNAALAAFCVDLGLHHYIIHDSPHLVETVSSY 1205
Query: 220 AQ 221
A+
Sbjct: 1206 AK 1207
Score = 38.1 bits (87), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 38/74 (51%), Gaps = 3/74 (4%)
Query: 126 DKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSA 185
D+ FLL AL+ P+ A YQRLE LGD+ + ++ + +L+ G + R
Sbjct: 855 DEVFLLPALTSPSAGAG---YDYQRLELLGDSFLKYISSIFLFVTCPQDGEGSLHIHRQR 911
Query: 186 MVNNVTFASYAVRL 199
+++N ++ R+
Sbjct: 912 IISNSALQFHSDRV 925
>gi|300709179|ref|XP_002996756.1| hypothetical protein NCER_100079 [Nosema ceranae BRL01]
gi|239606080|gb|EEQ83085.1| hypothetical protein NCER_100079 [Nosema ceranae BRL01]
Length = 1131
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 4/153 (2%)
Query: 42 GDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQA 101
G KV AD+VESL GV+ G + A F++++ IL H + + +
Sbjct: 910 GKKVYADIVESLIGVHYIEQGFQKAWNFIKSIGILENHGSKRHSNNFMTKTPNIILLCEY 969
Query: 102 RGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTS-YQRLEFLGDAIID 160
G+ PL I ++EK INYTF++K ++ +A+ HP+Y N + +Q+LE +GD +D
Sbjct: 970 EGILPLANI---LKVEKIINYTFKNKGYIEKAMIHPSYKDNIFGSERFQKLELVGDCFLD 1026
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFA 193
V+ Y++ ++ P + R ++VNN TFA
Sbjct: 1027 LKVSDYIFFKYTDADPETLHTHRKSLVNNHTFA 1059
>gi|315044595|ref|XP_003171673.1| hypothetical protein MGYG_06219 [Arthroderma gypseum CBS 118893]
gi|311344016|gb|EFR03219.1| hypothetical protein MGYG_06219 [Arthroderma gypseum CBS 118893]
Length = 1518
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 91/188 (48%), Gaps = 5/188 (2%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKIDVHEA-LYGPHPSAVRCP 98
L DK +ADV E+L G L + G + + +A+ + S D H + + P
Sbjct: 1163 LADKTIADVCEALIGASLLAGGPDHKFDMATKAVTVFVNS--DDHRVERWADYSKLYSLP 1220
Query: 99 EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITT-SYQRLEFLGDA 157
+ I Q++ ++ Y F+ L A HP+Y + YQRLEFLGD+
Sbjct: 1221 SYQTAVASASEIDVANQIKSKLGYCFRYPKLLRSAFMHPSYPSQWANVPCYQRLEFLGDS 1280
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
++D + +L+E + P +++ + AMV+N S AV L+LH HL+H S L +T
Sbjct: 1281 LLDMVCVNHLFERYPDKDPQWLTEHKMAMVSNKFLGSLAVSLNLHVHLIHISNTLQGQIT 1340
Query: 218 RFAQNQEA 225
+ + +A
Sbjct: 1341 SYTEELQA 1348
>gi|213408108|ref|XP_002174825.1| dicer [Schizosaccharomyces japonicus yFS275]
gi|212002872|gb|EEB08532.1| dicer [Schizosaccharomyces japonicus yFS275]
Length = 1384
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/186 (31%), Positives = 96/186 (51%), Gaps = 20/186 (10%)
Query: 32 SYNFLDRIKL-GDKVVADVVESLTGVYLRSCGIEGAMLFLQ--ALNILPQSKIDVHEALY 88
S N ++R +L +K VAD+VES G L G++ A+ LN +K D +++
Sbjct: 1028 SKNKMERSQLLANKTVADIVESSLGACLYDSGVDEALALGTRLGLNFYKTTKWDEWNSVF 1087
Query: 89 GPH---PSAVR-CPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANR 143
PSA C + A GL+ L + YTF+ L A +H +Y +
Sbjct: 1088 NVENLVPSAENDCFKHASGLESL------------VGYTFKHPGLLKIAFTHASYVKTTQ 1135
Query: 144 ITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHK 203
+YQ+LEFLGDA++DF+V YL++ + + + E++D +S V N + A + +L L+
Sbjct: 1136 TAVNYQQLEFLGDAVLDFIVVRYLFKKYQNKTAAELTDTKSFYVCNKSLAYVSFKLGLYD 1195
Query: 204 HLLHDS 209
+L D+
Sbjct: 1196 FMLQDN 1201
>gi|339264092|ref|XP_003366828.1| endoribonuclease Dicer [Trichinella spiralis]
gi|316961980|gb|EFV48479.1| endoribonuclease Dicer [Trichinella spiralis]
Length = 325
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 88/170 (51%), Gaps = 28/170 (16%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNA--NRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
E +I Y F +K++L+QAL+H YN +T SY+RLEFLGDAI+D+L++ +LY +
Sbjct: 65 SFEAKIGYRFTNKAYLIQALTHSLYNEVETPVTDSYERLEFLGDAILDYLISRHLYSSKR 124
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISD 232
SPG +SD+R+A+VNN + L+ + L RF ++
Sbjct: 125 IRSPGLLSDLRAALVNN--------------YFLYFNAELLSVNERFVLAMRGLKESVNF 170
Query: 233 EEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEAL 282
E ++ + EE+D E+V+VPK LGD+FE++
Sbjct: 171 HNE------------LYMMEEEQDDDEKETSEFAEHVEVPKPLGDIFESV 208
>gi|353236820|emb|CCA68807.1| hypothetical protein PIIN_02669 [Piriformospora indica DSM 11827]
Length = 1466
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/250 (27%), Positives = 116/250 (46%), Gaps = 35/250 (14%)
Query: 37 DRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI-LP--QSKIDVHEALYGPHPS 93
D LGDK VADV E++ G ++ G + +++L++ LP +S D P P
Sbjct: 1097 DHQWLGDKCVADVAEAIIGAAFQTGGPSLGLKVVKSLHLPLPFIESWDDFSLKAKAPPPD 1156
Query: 94 AVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEF 153
E +E + F L QAL+H + N +T Y+RLEF
Sbjct: 1157 LTITLEDN----------VLETVEATVGAKFHRPHILAQALTHTSARGNDMTC-YERLEF 1205
Query: 154 LGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLY 213
LGDA++DFLV ++++ L+PG ++ ++ AMV+N A+ +V LHK L+ +S +
Sbjct: 1206 LGDAVLDFLVIQHIFDLHGRLTPGALTMLKGAMVSNSALAAISVHYGLHKFLVVESKNVK 1265
Query: 214 ENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPK 273
+ + + E + E +EEG ++ G+ V+ PK
Sbjct: 1266 KAIDEYVPAVEEKQR----LEYAAADEEGRLK-----------------GQYWLEVEPPK 1304
Query: 274 ALGDVFEALV 283
++ DV E+++
Sbjct: 1305 SVADVVESIL 1314
>gi|380481939|emb|CCF41547.1| RNase3 domain-containing protein [Colletotrichum higginsianum]
Length = 1588
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 115/249 (46%), Gaps = 29/249 (11%)
Query: 38 RIKLGDKVVADVVESLTGV-YLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVR 96
R L DK VADV E+L G YL + ++A+ + +SK + + +G + +A
Sbjct: 1219 RHALADKSVADVCEALIGAAYLTYADSSDFDMAIRAVTAVVKSKNHLMTS-WGDYYAAY- 1276
Query: 97 CPEQARGLDPLRYIPECT-QLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFL 154
P + DP E Q++ ++ Y F+ + L A HP+Y A YQRLEFL
Sbjct: 1277 TPPAWQFADPTPMQKELARQIKDKLGYEFKSPALLRSAFKHPSYPRAYENLPDYQRLEFL 1336
Query: 155 GDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYE 214
GDA++D + +L+ F P +++ ++AMV+N AS V+L LHKH+L L
Sbjct: 1337 GDALLDMVCVDFLFHKFPDADPQWLTEHKTAMVSNQFLASLCVKLGLHKHVLSGHASLLN 1396
Query: 215 NVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKA 274
F + E+ +++ E +G T Y V++ PK
Sbjct: 1397 QTHDFVVSLES--------AKKDGEADGTF--------------TQAYWINVQH--APKY 1432
Query: 275 LGDVFEALV 283
L DV EA +
Sbjct: 1433 LSDVVEAYI 1441
>gi|303314275|ref|XP_003067146.1| Type III restriction enzyme, res subunit family protein [Coccidioides
posadasii C735 delta SOWgp]
gi|240106814|gb|EER25001.1| Type III restriction enzyme, res subunit family protein [Coccidioides
posadasii C735 delta SOWgp]
Length = 1487
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 99/214 (46%), Gaps = 13/214 (6%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-----LFLQALNILPQSKIDVHEAL-YGPHPSA 94
L DK +ADV E+L G +C + + + ++A+ L S D H L + +
Sbjct: 1138 LADKTIADVCEALIG----ACCLLASKNHRFDIAVKAVTALVSS--DDHNVLNWEQYSRL 1191
Query: 95 VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEF 153
P+ + + Q++K++ Y F+ L A +HP+Y +A YQRLEF
Sbjct: 1192 YSLPKYQTAVVDAAELDLAAQVKKKLGYVFKYPKLLRSAFTHPSYPSAWARVPCYQRLEF 1251
Query: 154 LGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLY 213
LGDA++D ++Y P +++ + AMV+N S AVRL LH HL H S L
Sbjct: 1252 LGDALLDMACVEHIYHKHPDKDPQWLTEHKMAMVSNKFLGSVAVRLGLHSHLNHFSTSLQ 1311
Query: 214 ENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCL 247
+T + + EA E D + +CL
Sbjct: 1312 SQITNYVEEIEAAELESGDSPDAWTLTSDPPKCL 1345
>gi|299754132|ref|XP_002911949.1| type III restriction enzyme [Coprinopsis cinerea okayama7#130]
gi|298410618|gb|EFI28455.1| type III restriction enzyme [Coprinopsis cinerea okayama7#130]
Length = 1457
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 113/241 (46%), Gaps = 46/241 (19%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARG 103
+ + D +E+L G GI A+ +L + GP P +R + +G
Sbjct: 1064 RSLQDCMEALLGASFLQGGIPMALQAGPSLGV----------EFGGPLPWEMRY--ERKG 1111
Query: 104 LDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLV 163
+ L++R+ YTF S L++A++HP++ + SYQRLEFLGDAI+D +V
Sbjct: 1112 PAEVATTHLFDTLQERLGYTFHSNSILVEAVTHPSFATD--GPSYQRLEFLGDAILDLVV 1169
Query: 164 TAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVR-LDLHKHLLHDSPRLYENVTRFAQN 222
YLYE F + ++S +R+ ++ T A A++ L +HK LL ++ LY + +
Sbjct: 1170 VHYLYEKFPEANSHQLSLLRAKVICAPTLAYLAIKELGVHKILLINNMGLYRAIEAYVPV 1229
Query: 223 QEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEAL 282
E +I+DEE I R F D PKA+ DVFE+L
Sbjct: 1230 FE----DITDEE--------IARSYYKF-------------------DPPKAISDVFESL 1258
Query: 283 V 283
V
Sbjct: 1259 V 1259
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 124 FQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIR 183
F + L+++L+ P A + S QRLE LGDA++ T +L+ + + G+++ +R
Sbjct: 953 FIEDKILIESLTIP---AALLAFSNQRLETLGDAVLQLCTTVHLFNQYPNRHEGQLTTLR 1009
Query: 184 SAMVNNVTFASYAVRLDLHKHL 205
A V+N A+ + L +++
Sbjct: 1010 RATVSNKFLLQRALEMGLEEYI 1031
>gi|426194802|gb|EKV44733.1| hypothetical protein AGABI2DRAFT_209093 [Agaricus bisporus var.
bisporus H97]
Length = 1524
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 121/274 (44%), Gaps = 67/274 (24%)
Query: 41 LGDKVVADVVESLTGV-YLRS---CGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVR 96
L K++ADVVESL G Y+ G E LF L LP + R
Sbjct: 1148 LSTKILADVVESLIGAAYIHGGFPLGYECTKLFGLGLRWLPPPE---------------R 1192
Query: 97 CPEQARGLDPLRYIPECTQ-LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLG 155
+ ++P + IP +EK + YTF+ K LL+AL+H +Y + T SY+R+EFLG
Sbjct: 1193 IKDFLGAVEPDKNIPSALYYVEKMLGYTFKHKVLLLEALTHASYQQDARTVSYERMEFLG 1252
Query: 156 DAIIDFLVTAYLYEN-FSHLSPGEISDIRSAMVN-----------NVTFASYAVRLD--- 200
D+++D +VT YLY + SPG I RS++VN +V F + R D
Sbjct: 1253 DSVLDMVVTDYLYHAPGKNYSPGHIHLRRSSVVNTHFLAYICLKTSVKFDALMPRADDEG 1312
Query: 201 -----------LHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIF 249
L + LLH S R+ ++ +A H ++ EE EEG++ IF
Sbjct: 1313 IELLADAQEVMLWQCLLHSSSRIMDD--------QANTH-TRFKKRREEIEEGLMNDTIF 1363
Query: 250 FLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
+Q PK D+ E+++
Sbjct: 1364 PWAALTRLQA------------PKFFSDIIESVI 1385
>gi|320037410|gb|EFW19347.1| hypothetical protein CPSG_03731 [Coccidioides posadasii str.
Silveira]
Length = 1465
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 99/214 (46%), Gaps = 13/214 (6%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-----LFLQALNILPQSKIDVHEAL-YGPHPSA 94
L DK +ADV E+L G +C + + + ++A+ L S D H L + +
Sbjct: 1116 LADKTIADVCEALIG----ACCLLASKNHRFDIAVKAVTALVSS--DDHNVLNWEQYSRL 1169
Query: 95 VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEF 153
P+ + + Q++K++ Y F+ L A +HP+Y +A YQRLEF
Sbjct: 1170 YSLPKYQTAVVDAAELDLAAQVKKKLGYVFKYPKLLRSAFTHPSYPSAWARVPCYQRLEF 1229
Query: 154 LGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLY 213
LGDA++D ++Y P +++ + AMV+N S AVRL LH HL H S L
Sbjct: 1230 LGDALLDMACVEHIYHKHPDKDPQWLTEHKMAMVSNKFLGSVAVRLGLHSHLNHFSTSLQ 1289
Query: 214 ENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCL 247
+T + + EA E D + +CL
Sbjct: 1290 SQITNYVEEIEAAELESGDSPDAWTLTSDPPKCL 1323
>gi|242215871|ref|XP_002473747.1| predicted protein [Postia placenta Mad-698-R]
gi|220727142|gb|EED81071.1| predicted protein [Postia placenta Mad-698-R]
Length = 1725
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/193 (33%), Positives = 98/193 (50%), Gaps = 21/193 (10%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARG 103
+ + D +E+ G + G+ A+ AL + +L GP P +R G
Sbjct: 1060 RSLQDCMEATLGAAFTTGGMGMALRAGTALGL----------SLGGPLPWDIR----YGG 1105
Query: 104 LDPLRYIPEC-TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFL 162
P + T L++ + Y F+ LL+A++HP++N+ T+SYQRLEFLGDA++D
Sbjct: 1106 CIPKSPVSALFTLLQESLGYRFRSGRLLLEAMTHPSFNSFE-TSSYQRLEFLGDAVVDLA 1164
Query: 163 VTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAV-RLDLHKHLLHDSPRLYENVTRFAQ 221
V YLY F + G++S RS V + AS AV RL LHK LL ++ L + +
Sbjct: 1165 VMRYLYNKFPQATSGQLSWARSRAVCAPSLASVAVKRLGLHKLLLVNNVELSIAINNYVP 1224
Query: 222 NQEARNHEISDEE 234
E E+S+EE
Sbjct: 1225 ILE----ELSNEE 1233
Score = 42.7 bits (99), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 129 FLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
L+QAL+ P+ NA + QRLE LGD+++ +L+ F G++ +R V+
Sbjct: 950 LLIQALTIPSANAG---FNNQRLETLGDSVLKLTTVVHLFNRFPFRHEGQLDTLRRNSVS 1006
Query: 189 NVTFASYAVRLDLHKHL 205
N T + A + L ++L
Sbjct: 1007 NRTLLARAKEVGLEEYL 1023
>gi|408399323|gb|EKJ78431.1| hypothetical protein FPSE_01388 [Fusarium pseudograminearum CS3096]
Length = 1860
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 96/188 (51%), Gaps = 10/188 (5%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKIDVHEA-LYGPHPSAVRCP 98
L DK +ADV E+L G S G EG M + ++A+ + +SK HE + + +A + P
Sbjct: 1490 LADKTIADVCEALIGAAYLS-GEEGNMDMGVKAVTRMVKSK--NHEMEFFRDYFAAFKVP 1546
Query: 99 --EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGD 156
A+ R + +C + K Y F + L HP++ + YQRLEFLGD
Sbjct: 1547 PWHTAKSTTLQRRLVDC--VAKVTGYRFNSSALLQSVFKHPSWPYEAVP-DYQRLEFLGD 1603
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENV 216
A++D +V +LY+ F P +++ + AMV+N V+L+LHKHLL + L +
Sbjct: 1604 ALLDMVVVDFLYKRFKLADPQWLTEHKMAMVSNQFLGCLCVQLNLHKHLLFTTSSLTGQI 1663
Query: 217 TRFAQNQE 224
+ + E
Sbjct: 1664 SEYVAELE 1671
>gi|403171941|ref|XP_003331118.2| hypothetical protein PGTG_13081 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169641|gb|EFP86699.2| hypothetical protein PGTG_13081 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1431
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 111/207 (53%), Gaps = 28/207 (13%)
Query: 10 DLYQDP-TEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAML 68
D ++D TEDGK+ LP+ +++ + +V++DVVE+L G + GIE +
Sbjct: 1024 DRFRDAQTEDGKE------LPNGNFSR----NVPRRVLSDVVEALLGAGFLTGGIELGLK 1073
Query: 69 FLQALNIL-----PQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYT 123
AL++ P ++ ++ A G + P + +C LE++I Y
Sbjct: 1074 IGTALDLCFGGTTPWNERTLNIAFEGTAHDKLASP----------ILLKCQALEEKIGYV 1123
Query: 124 FQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIR 183
F++K L+QAL+H + N+ +T Y+R E+LGDA++D + + Y+ F + + E++ R
Sbjct: 1124 FKEKLLLVQALTHRSANSF-MTNCYEREEWLGDAVVDMWIVQHAYKRFDNATAEELTLAR 1182
Query: 184 SAMVNNVTFASYAV-RLDLHKHLLHDS 209
+ +V+N + A+ +L LHK ++H S
Sbjct: 1183 AKLVSNGSLGFLAIKKLGLHKMIMHKS 1209
>gi|326481629|gb|EGE05639.1| hypothetical protein TEQG_04648 [Trichophyton equinum CBS 127.97]
Length = 1519
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 5/188 (2%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKIDVHEA-LYGPHPSAVRCP 98
L DK +ADV E+L G L + G + + +A+ + S D H + + P
Sbjct: 1163 LADKTIADVCEALIGASLLAGGPDHKFDMATKAVTVFVNS--DDHRVEKWADYSRLYSLP 1220
Query: 99 EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITT-SYQRLEFLGDA 157
I Q++ ++ Y F+ L A HP+Y + YQRLEFLGD+
Sbjct: 1221 NYQTASASASEIDVANQIQSKLGYCFKYPKLLRSAFMHPSYPSQWANVPCYQRLEFLGDS 1280
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
++D + +L+E + P +++ + AMV+N S AV L+LH HL+H S L +T
Sbjct: 1281 LLDMVCVNHLFERYPDKDPQWLTEHKMAMVSNKFLGSLAVNLNLHVHLIHISNTLQGQIT 1340
Query: 218 RFAQNQEA 225
+ + +A
Sbjct: 1341 SYTEELQA 1348
>gi|327297344|ref|XP_003233366.1| dicer-like protein 1 [Trichophyton rubrum CBS 118892]
gi|326464672|gb|EGD90125.1| dicer-like protein 1 [Trichophyton rubrum CBS 118892]
Length = 1519
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 5/188 (2%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKIDVHEA-LYGPHPSAVRCP 98
L DK +ADV E+L G L + G + + +A+ + S D H + + P
Sbjct: 1163 LADKTIADVCEALIGASLLAGGPDHKFDMATKAVTVFVNS--DDHRVERWADYSRLYSLP 1220
Query: 99 EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITT-SYQRLEFLGDA 157
I Q++ ++ Y F+ L A HP+Y + YQRLEFLGD+
Sbjct: 1221 NYQTASASASEIDVANQIQSKLGYCFKYPKLLRSAFMHPSYPSQWANVPCYQRLEFLGDS 1280
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
++D + +L+E + P +++ + AMV+N S AV L+LH HL+H S L +T
Sbjct: 1281 LLDMVCVNHLFERYPDKDPQWLTEHKMAMVSNKFLGSLAVSLNLHVHLIHISNTLQGQIT 1340
Query: 218 RFAQNQEA 225
+ + +A
Sbjct: 1341 SYTEELQA 1348
>gi|326472405|gb|EGD96414.1| dicer [Trichophyton tonsurans CBS 112818]
Length = 1519
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 5/188 (2%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKIDVHEA-LYGPHPSAVRCP 98
L DK +ADV E+L G L + G + + +A+ + S D H + + P
Sbjct: 1163 LADKTIADVCEALIGASLLAGGPDHKFDMATKAVTVFVNS--DDHRVEKWADYSRLYSLP 1220
Query: 99 EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITT-SYQRLEFLGDA 157
I Q++ ++ Y F+ L A HP+Y + YQRLEFLGD+
Sbjct: 1221 NYQTASASASEIDVANQIQSKLGYCFKYPKLLRSAFMHPSYPSQWANVPCYQRLEFLGDS 1280
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
++D + +L+E + P +++ + AMV+N S AV L+LH HL+H S L +T
Sbjct: 1281 LLDMVCVNHLFERYPDKDPQWLTEHKMAMVSNKFLGSLAVNLNLHVHLIHISNTLQGQIT 1340
Query: 218 RFAQNQEA 225
+ + +A
Sbjct: 1341 SYTEELQA 1348
>gi|328770756|gb|EGF80797.1| hypothetical protein BATDEDRAFT_24696 [Batrachochytrium dendrobatidis
JAM81]
Length = 1641
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 98/186 (52%), Gaps = 11/186 (5%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQAL--NILPQSKIDVHEALYG---PHPSA 94
++ +K +A +E++ G + G+E A L + L + + H LY PS+
Sbjct: 1215 EISNKTLAGSIEAVIGACVEEGGVEQAALAVSRLLSDEYETDWSNYHHDLYTSIQASPSS 1274
Query: 95 VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFL 154
E +DP+ Q+E++I YTF+DK+ L +AL+H ++ + +QRLEFL
Sbjct: 1275 TDYYESVVHVDPI----ATKQIEEQIGYTFRDKTLLWEALTHS--GTGKLGSMFQRLEFL 1328
Query: 155 GDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYE 214
GDA++ +L +LY+ L+PG +S +R+ +V N A ++++ L K++ H +
Sbjct: 1329 GDAVLSYLAMQHLYKITPPLNPGGLSKLRAELVCNQFLACVSIQIGLVKYIRHTDMTMEA 1388
Query: 215 NVTRFA 220
+ RF
Sbjct: 1389 AIGRFT 1394
>gi|302662009|ref|XP_003022664.1| hypothetical protein TRV_03185 [Trichophyton verrucosum HKI 0517]
gi|291186623|gb|EFE42046.1| hypothetical protein TRV_03185 [Trichophyton verrucosum HKI 0517]
Length = 1510
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 5/188 (2%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKIDVHEA-LYGPHPSAVRCP 98
L DK +ADV E+L G L + G + + +A+ + S D H + + P
Sbjct: 1154 LADKTIADVCEALIGASLLAGGPDHKFDMATKAVTVFVNS--DDHRVEKWADYSRLYSLP 1211
Query: 99 EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITT-SYQRLEFLGDA 157
I Q++ ++ Y F+ L A HP+Y + YQRLEFLGD+
Sbjct: 1212 NYQTASASASEIDVANQIQSKLGYCFKYPKLLRSAFMHPSYPSQWANVPCYQRLEFLGDS 1271
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
++D + +L+E + P +++ + AMV+N S AV L+LH HL+H S L +T
Sbjct: 1272 LLDMVCVNHLFERYPDKDPQWLTEHKMAMVSNKFLGSLAVSLNLHVHLIHISNTLQGQIT 1331
Query: 218 RFAQNQEA 225
+ + +A
Sbjct: 1332 SYTEELQA 1339
>gi|302511053|ref|XP_003017478.1| hypothetical protein ARB_04359 [Arthroderma benhamiae CBS 112371]
gi|291181049|gb|EFE36833.1| hypothetical protein ARB_04359 [Arthroderma benhamiae CBS 112371]
Length = 1510
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 90/188 (47%), Gaps = 5/188 (2%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKIDVHEA-LYGPHPSAVRCP 98
L DK +ADV E+L G L + G + + +A+ + S D H + + P
Sbjct: 1154 LADKTIADVCEALIGASLLAGGPDHKFDMATKAVTVFVNS--DDHRVEKWADYSRLYSLP 1211
Query: 99 EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITT-SYQRLEFLGDA 157
I Q++ ++ Y F+ L A HP+Y + YQRLEFLGD+
Sbjct: 1212 NYQTASASASEIDVANQIQSKLGYCFKYPKLLRSAFMHPSYPSQWANVPCYQRLEFLGDS 1271
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
++D + +L+E + P +++ + AMV+N S AV L+LH HL+H S L +T
Sbjct: 1272 LLDMVCVNHLFERYPDKDPQWLTEHKMAMVSNKFLGSLAVSLNLHVHLIHISNTLQGQIT 1331
Query: 218 RFAQNQEA 225
+ + +A
Sbjct: 1332 SYTEELQA 1339
>gi|409076508|gb|EKM76879.1| hypothetical protein AGABI1DRAFT_77978 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1528
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 111/240 (46%), Gaps = 55/240 (22%)
Query: 41 LGDKVVADVVESLTGV-YLRS---CGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVR 96
L K++ADVVESL G Y+ G E LF L LP + R
Sbjct: 1148 LSTKILADVVESLIGAAYIHGGFPLGYECTKLFGLGLRWLPPPE---------------R 1192
Query: 97 CPEQARGLDPLRYIPECTQ-LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLG 155
+ ++P + IP +EK + YTF+ K LL+AL+H +Y + T SY+R+EFLG
Sbjct: 1193 IKDFLGAVEPDKNIPSALYYVEKMLGYTFKHKVLLLEALTHASYQQDARTVSYERMEFLG 1252
Query: 156 DAIIDFLVTAYLYENF-SHLSPGEISDIRSAMVN-----------NVTFASYAVRLD--- 200
D+++D +VT YLY + SPG I RS++VN +V F + R D
Sbjct: 1253 DSVLDMVVTDYLYHAPDKNYSPGHIHLRRSSVVNTHFLAYICLKTSVKFDALMPRADDEG 1312
Query: 201 -----------LHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIF 249
L + LLH S R+ ++ +A H ++ EE EEG++ IF
Sbjct: 1313 IELLADAQEVMLWQCLLHSSSRIMDD--------QANTH-TRFKKRREEIEEGLMNDTIF 1363
>gi|442570277|sp|Q1DKI1.3|DCL1_COCIM RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease DCL1; Includes: RecName:
Full=ATP-dependent helicase DCL1
gi|392869759|gb|EJB11896.1| dicer-like protein 1 [Coccidioides immitis RS]
Length = 1500
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 99/214 (46%), Gaps = 13/214 (6%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-----LFLQALNILPQSKIDVHEAL-YGPHPSA 94
L DK +ADV E+L G +C + + + ++A+ L S D H L + +
Sbjct: 1151 LADKTIADVCEALIG----ACCLLASKNHRFDIAVKAVTALVSS--DDHNVLNWEQYSRL 1204
Query: 95 VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEF 153
P+ + + Q++K++ Y F+ L A +HP+Y +A YQRLEF
Sbjct: 1205 YSIPKYQTAVVDAAELDLAAQVKKKLGYDFKYPKLLRSAFTHPSYPSAWARVPCYQRLEF 1264
Query: 154 LGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLY 213
LGDA++D ++Y P +++ + AMV+N S AVRL LH HL H S L
Sbjct: 1265 LGDALLDMACVEHIYHKHPDKDPQWLTEHKMAMVSNKFLGSVAVRLGLHSHLNHFSTSLQ 1324
Query: 214 ENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCL 247
+T + + EA E D + +CL
Sbjct: 1325 SQITNYVEEIEAAELESGDPPDAWTLTSDPPKCL 1358
>gi|119174400|ref|XP_001239561.1| hypothetical protein CIMG_09182 [Coccidioides immitis RS]
Length = 1357
Score = 84.7 bits (208), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 99/214 (46%), Gaps = 13/214 (6%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-----LFLQALNILPQSKIDVHEAL-YGPHPSA 94
L DK +ADV E+L G +C + + + ++A+ L S D H L + +
Sbjct: 1008 LADKTIADVCEALIG----ACCLLASKNHRFDIAVKAVTALVSS--DDHNVLNWEQYSRL 1061
Query: 95 VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEF 153
P+ + + Q++K++ Y F+ L A +HP+Y +A YQRLEF
Sbjct: 1062 YSIPKYQTAVVDAAELDLAAQVKKKLGYDFKYPKLLRSAFTHPSYPSAWARVPCYQRLEF 1121
Query: 154 LGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLY 213
LGDA++D ++Y P +++ + AMV+N S AVRL LH HL H S L
Sbjct: 1122 LGDALLDMACVEHIYHKHPDKDPQWLTEHKMAMVSNKFLGSVAVRLGLHSHLNHFSTSLQ 1181
Query: 214 ENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCL 247
+T + + EA E D + +CL
Sbjct: 1182 SQITNYVEEIEAAELESGDPPDAWTLTSDPPKCL 1215
>gi|322702026|gb|EFY93774.1| Dicer-like protein 1 [Metarhizium acridum CQMa 102]
Length = 1524
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 66/244 (27%), Positives = 112/244 (45%), Gaps = 27/244 (11%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPE 99
+L DK +ADV E+L G + EG L ++A+ + QS+ + V+
Sbjct: 1174 RLADKSIADVCEALIGAAYMT-EPEGMNLAVKAVTKMVQSRNHRMTKYSDYYEGYVQQAW 1232
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAII 159
Q P+ + ++E I Y F+ L A HP+Y +YQRLEFLGDA++
Sbjct: 1233 QTIPPRPIEVL-AADKVEGSIGYKFRSPKLLRSAFKHPSYPYEPELPNYQRLEFLGDALL 1291
Query: 160 DFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
D + +L+ + P +++ + AM +N F+ V L LH+H+L + ++ F
Sbjct: 1292 DVAIVDFLFRRYPLADPQWLTEHKMAMASNHFFSFLCVELGLHRHILSTGSSMMGHIAGF 1351
Query: 220 AQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVF 279
+ E+ + + E+G+++ L F+L E PKAL D+
Sbjct: 1352 VEQI---------EKAKLQTEDGVLQ-LDFWLNTEHP---------------PKALSDIL 1386
Query: 280 EALV 283
EA+V
Sbjct: 1387 EAVV 1390
>gi|409080003|gb|EKM80364.1| hypothetical protein AGABI1DRAFT_128037 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1365
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 111/250 (44%), Gaps = 47/250 (18%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHE-ALYGPHPSAVRCPE 99
+ +K VADV E++ G S G + A+ +AL I DV E A +G SA R
Sbjct: 1117 IANKTVADVAEAIIGAAYISGGRDSALKATKALMI---PFTDVEEWADFGRKASAPR--- 1170
Query: 100 QARGLDPLRYIPECTQL---EKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGD 156
LD + PE + + E + FQ S L L+ + +QRLEFLGD
Sbjct: 1171 ----LD-TGHAPEPSVMHFIETITGFRFQQPSLLRLTLTQNSMEMK----DHQRLEFLGD 1221
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENV 216
A++DFLV YLY+ H SPGE+S ++S MV+N A+ V LH
Sbjct: 1222 AVLDFLVVRYLYDKDEHASPGELSVMKSLMVSNSILAAICVWSGLH-------------- 1267
Query: 217 TRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEY---VDVPK 273
RF ++ + + D E+ E E + RV + +DVPK
Sbjct: 1268 -RFVHVRQQQKQVVWDYEKALRGREA----------AETSSTSKEAARVTYFWMDLDVPK 1316
Query: 274 ALGDVFEALV 283
L DV E+++
Sbjct: 1317 VLSDVIESII 1326
Score = 38.1 bits (87), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 118 KRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPG 177
K +N+ +D L+ A S P + +Y+RLE LGDA++ +L T Y++ + + G
Sbjct: 965 KNLNHCVKD-DLLIMATSSPLAGND---YNYERLELLGDALLKYLSTTYVFVQNLNGTEG 1020
Query: 178 EISDIRSAMVNN 189
E+ R ++N
Sbjct: 1021 ELHTARQRFISN 1032
>gi|302901921|ref|XP_003048541.1| hypothetical protein NECHADRAFT_95770 [Nectria haematococca mpVI
77-13-4]
gi|256729474|gb|EEU42828.1| hypothetical protein NECHADRAFT_95770 [Nectria haematococca mpVI
77-13-4]
Length = 1381
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/162 (33%), Positives = 87/162 (53%), Gaps = 10/162 (6%)
Query: 28 LPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEAL 87
LP S LDRI G K +ADVVE+L G + G++ A L+ +++ K HEA
Sbjct: 1017 LPEESVEPLDRIT-GHKNLADVVEALIGASFQDGGMDKA---LKCISVFLGDKCHWHEAG 1072
Query: 88 YGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTS 147
G R LD + P LE+ I Y+F+ KS L++A++H +Y + S
Sbjct: 1073 RG------RDILFNSALDGVPLPPTLEPLEELIGYSFRKKSLLIEAVTHGSYAGDTHQRS 1126
Query: 148 YQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
Y++LEFLGDA++D+++ ++ L ++ I++AMVN
Sbjct: 1127 YEQLEFLGDAVLDYIIVTKVFNVKPPLPHSDLHLIKTAMVNG 1168
>gi|158706452|sp|A2RAF3.2|DCL1_ASPNC RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1525
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 120/248 (48%), Gaps = 37/248 (14%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKIDVHEA-LYGPHPSAVRCP 98
L +K +ADV E+L G L S G + + ++A+ L S H+A + + S P
Sbjct: 1171 LAEKTIADVCEALIGAALLSGGPDHRFDMAVKAVTTLVNSP--SHKAERWKDYISFYTIP 1228
Query: 99 E-QARGLDPLR-YIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLG 155
+ Q R D Y+ ++E++++Y F+ + L A +HP+Y +A YQRLEFLG
Sbjct: 1229 KYQRRAADGAELYLSR--KIEEKLSYRFRYPTLLGSAFTHPSYPSAWAKVPCYQRLEFLG 1286
Query: 156 DAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYEN 215
D++ID + L+ F P +++ + AMV+N + AV+L LH HL + S L
Sbjct: 1287 DSLIDMVCVEDLFARFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLKYFSAPLQSQ 1346
Query: 216 VTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKAL 275
+T++A+ EI + E E EG V Y V + D PK L
Sbjct: 1347 ITQYAE-------EI---QTAEGESEGAVD----------------YWTVTK--DPPKCL 1378
Query: 276 GDVFEALV 283
D+ EA V
Sbjct: 1379 PDMVEAYV 1386
>gi|169608916|ref|XP_001797877.1| hypothetical protein SNOG_07542 [Phaeosphaeria nodorum SN15]
gi|160701743|gb|EAT85008.2| hypothetical protein SNOG_07542 [Phaeosphaeria nodorum SN15]
Length = 1017
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 84/148 (56%), Gaps = 17/148 (11%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQALNILP-QSKIDVHEALYGPHPSAVRCPEQA- 101
K++AD++ESL G G E A+L +Q L LP + I V A H +A P +A
Sbjct: 654 KLIADIIESLIGACYTVGGFEKAVLCVQTL--LPLEPWISVPAANSILHEAA---PAEAD 708
Query: 102 -RGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
GLD LE I YTF+ K LL+AL+H +++ + SY+RLEFLGDA++D
Sbjct: 709 LMGLD---------VLETLIGYTFKKKPLLLEALTHASFSGPHVHCSYERLEFLGDAVLD 759
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVN 188
++++ L+ + LS ++ IR+A VN
Sbjct: 760 YIISKRLHAHSPELSHQKMHAIRTATVN 787
>gi|350630584|gb|EHA18956.1| hypothetical protein ASPNIDRAFT_42773 [Aspergillus niger ATCC 1015]
Length = 1498
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKIDVHEA-LYGPHPSAVRCP 98
L +K +ADV E+L G L S G + + ++A+ L S H+A + + S P
Sbjct: 1128 LAEKTIADVCEALIGAALLSGGPDHRFDMAVKAVTTLVNSP--SHKAERWKDYISFYTIP 1185
Query: 99 E-QARGLDPLR-YIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLG 155
+ Q R D Y+ +LE++++Y F+ + L A +HP+Y +A YQRLEFLG
Sbjct: 1186 KYQRRAADGAELYLSR--KLEEKLSYRFRYPTLLGSAFTHPSYPSAWAKVPCYQRLEFLG 1243
Query: 156 DAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYEN 215
D++ID + L+ F P +++ + AMV+N + AV+L LH HL + S L
Sbjct: 1244 DSLIDMVCVEDLFARFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLKYFSAPLQSQ 1303
Query: 216 VTRFAQNQEARNHEISDEEEEEE 238
+T++A+ EI E E E
Sbjct: 1304 ITQYAE-------EIQTAEGESE 1319
>gi|158705946|sp|Q0UL22.2|DCL2_PHANO RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease DCL2; Includes: RecName:
Full=ATP-dependent helicase DCL2
Length = 1399
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/148 (37%), Positives = 84/148 (56%), Gaps = 17/148 (11%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQALNILP-QSKIDVHEALYGPHPSAVRCPEQA- 101
K++AD++ESL G G E A+L +Q L LP + I V A H +A P +A
Sbjct: 1036 KLIADIIESLIGACYTVGGFEKAVLCVQTL--LPLEPWISVPAANSILHEAA---PAEAD 1090
Query: 102 -RGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
GLD LE I YTF+ K LL+AL+H +++ + SY+RLEFLGDA++D
Sbjct: 1091 LMGLD---------VLETLIGYTFKKKPLLLEALTHASFSGPHVHCSYERLEFLGDAVLD 1141
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVN 188
++++ L+ + LS ++ IR+A VN
Sbjct: 1142 YIISKRLHAHSPELSHQKMHAIRTATVN 1169
>gi|317037196|ref|XP_001398755.2| dicer-like protein 1 [Aspergillus niger CBS 513.88]
Length = 1493
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 120/248 (48%), Gaps = 37/248 (14%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKIDVHEA-LYGPHPSAVRCP 98
L +K +ADV E+L G L S G + + ++A+ L S H+A + + S P
Sbjct: 1139 LAEKTIADVCEALIGAALLSGGPDHRFDMAVKAVTTLVNSP--SHKAERWKDYISFYTIP 1196
Query: 99 E-QARGLDPLR-YIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLG 155
+ Q R D Y+ ++E++++Y F+ + L A +HP+Y +A YQRLEFLG
Sbjct: 1197 KYQRRAADGAELYLSR--KIEEKLSYRFRYPTLLGSAFTHPSYPSAWAKVPCYQRLEFLG 1254
Query: 156 DAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYEN 215
D++ID + L+ F P +++ + AMV+N + AV+L LH HL + S L
Sbjct: 1255 DSLIDMVCVEDLFARFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLKYFSAPLQSQ 1314
Query: 216 VTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKAL 275
+T++A+ EI + E E EG V Y V + D PK L
Sbjct: 1315 ITQYAE-------EI---QTAEGESEGAVD----------------YWTVTK--DPPKCL 1346
Query: 276 GDVFEALV 283
D+ EA V
Sbjct: 1347 PDMVEAYV 1354
>gi|327355811|gb|EGE84668.1| hypothetical protein BDDG_07613 [Ajellomyces dermatitidis ATCC 18188]
Length = 1509
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 92/187 (49%), Gaps = 5/187 (2%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQ-SKIDVHEAL-YGPHPSAVRCP 98
LGDK +AD+ E+L G L S G A F A+ + D H A + + + P
Sbjct: 1150 LGDKTIADICEALIGASLLSGG--KAHRFDSAVKAVTTFVNSDDHRASEWNCYVNLYSLP 1207
Query: 99 EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLGDA 157
+ + Q+ R+ Y F+ L A +H ++ +A YQRLEFLGD+
Sbjct: 1208 DYQIAQADAGQLDLAKQIGDRLGYQFRYPRLLRSAFTHASFPSAWSRVPCYQRLEFLGDS 1267
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
++D + YLY + P +++ + AMV+N + AV+L LH+HL++ S L +T
Sbjct: 1268 LLDMVCVEYLYHRYPDRDPQWLTEHKMAMVSNKFLGAVAVKLGLHRHLIYFSNALLGQIT 1327
Query: 218 RFAQNQE 224
R+ + E
Sbjct: 1328 RYVEEIE 1334
>gi|393246694|gb|EJD54202.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 1453
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 128/288 (44%), Gaps = 28/288 (9%)
Query: 5 SNLDFDLYQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIE 64
+++D D PTED E +P +L KV+ADVVESL GV + G +
Sbjct: 1068 TSMDVD---PPTEDPPAKEKDENVP----------RLSTKVLADVVESLIGVAHENGGYD 1114
Query: 65 GAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTF 124
A+ L+ L I +++ H R G P Y+ LE+ + + F
Sbjct: 1115 AAVDMLRRLGIGQSMELEWKTVADRVHSIVNRIEPLPHGY-PEDYV---RTLEQMLGHRF 1170
Query: 125 QDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRS 184
+ S L +AL+H Y + T SY+RLEFLGD+++D +VT +Y + L P ++ R
Sbjct: 1171 EHPSLLFEALTHANYTGDVHTVSYERLEFLGDSLLDNVVTEQVYHSPRRLPPVLMTRCRI 1230
Query: 185 AMVNNVTFASYAVRLDL-HKHL-LHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEG 242
A VN A L +H+ + +P E T ++ R G
Sbjct: 1231 ATVNTEMLAYCCANLSTEQQHMTVQRAPDRPEGATFVPTSRTVRLPTFI--RMSNVAMVG 1288
Query: 243 IVRCLI--FFLIEEKDVQTDVYGRVVEYVDV-----PKALGDVFEALV 283
+VR I + + E+ + +GR + D+ PK LGD+ E+L+
Sbjct: 1289 VVRDYIAGYERVHERIAERFAHGREFPWTDLFELRAPKFLGDIVESLI 1336
>gi|239607869|gb|EEQ84856.1| dicer-like protein [Ajellomyces dermatitidis ER-3]
Length = 1522
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 92/187 (49%), Gaps = 5/187 (2%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQ-SKIDVHEAL-YGPHPSAVRCP 98
LGDK +AD+ E+L G L S G A F A+ + D H A + + + P
Sbjct: 1163 LGDKTIADICEALIGASLLSGG--KAHRFDSAVKAVTTFVNSDDHRASEWNCYVNLYSLP 1220
Query: 99 EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLGDA 157
+ + Q+ R+ Y F+ L A +H ++ +A YQRLEFLGD+
Sbjct: 1221 DYQIAQADAGQLDLAKQIGDRLGYQFRYPRLLRSAFTHASFPSAWSRVPCYQRLEFLGDS 1280
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
++D + YLY + P +++ + AMV+N + AV+L LH+HL++ S L +T
Sbjct: 1281 LLDMVCVEYLYHRYPDRDPQWLTEHKMAMVSNKFLGAVAVKLGLHRHLIYFSNALLGQIT 1340
Query: 218 RFAQNQE 224
R+ + E
Sbjct: 1341 RYVEEIE 1347
>gi|408394282|gb|EKJ73491.1| hypothetical protein FPSE_06330 [Fusarium pseudograminearum CS3096]
Length = 1451
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 80/148 (54%), Gaps = 9/148 (6%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+G K +ADVVE+L G + GI A L+ + I +K + H+ RC
Sbjct: 1091 IGPKTLADVVEALVGASYQDGGISKA---LECIKIFLGTKCNWHDD------KVARCILF 1141
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
+ P LE+ I YTF+ KS L++A++H +Y A+ SY++LEFLGDA++D
Sbjct: 1142 RAATSDVPLPPTMEPLEELIGYTFEKKSLLIEAMTHGSYAADGQQRSYEQLEFLGDAVLD 1201
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVN 188
++V ++++ + G + +++AM N
Sbjct: 1202 YIVVTRMFQSDPPVPNGRLHMVKTAMAN 1229
>gi|261198280|ref|XP_002625542.1| dicer-like protein [Ajellomyces dermatitidis SLH14081]
gi|239595505|gb|EEQ78086.1| dicer-like protein [Ajellomyces dermatitidis SLH14081]
Length = 1522
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 92/187 (49%), Gaps = 5/187 (2%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQ-SKIDVHEAL-YGPHPSAVRCP 98
LGDK +AD+ E+L G L S G A F A+ + D H A + + + P
Sbjct: 1163 LGDKTIADICEALIGASLLSGG--KAHRFDSAVKAVTTFVNSDDHRASEWNCYVNLYSLP 1220
Query: 99 EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLGDA 157
+ + Q+ R+ Y F+ L A +H ++ +A YQRLEFLGD+
Sbjct: 1221 DYQIAQADAGQLDLAKQIGDRLGYQFRYPRLLRSAFTHASFPSAWSRVPCYQRLEFLGDS 1280
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
++D + YLY + P +++ + AMV+N + AV+L LH+HL++ S L +T
Sbjct: 1281 LLDMVCVEYLYHRYPDRDPQWLTEHKMAMVSNKFLGAVAVKLGLHRHLIYFSNALLGQIT 1340
Query: 218 RFAQNQE 224
R+ + E
Sbjct: 1341 RYVEEIE 1347
>gi|426198231|gb|EKV48157.1| hypothetical protein AGABI2DRAFT_202619 [Agaricus bisporus var.
bisporus H97]
Length = 1179
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 110/250 (44%), Gaps = 47/250 (18%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHE-ALYGPHPSAVRCPE 99
+ +K VADV E++ G S G + A+ +AL I DV E A +G SA P
Sbjct: 931 IANKTVADVAEAIIGAAYISGGRDSALKATKALMI---PFADVEEWADFGRKASA---PR 984
Query: 100 QARGLDPLRYIPECTQL---EKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGD 156
G + PE + + E + FQ S L L+ + +QRLEFLGD
Sbjct: 985 HDTG-----HAPEPSVMHFIETITGFRFQQPSLLRLTLTQNSMEMK----DHQRLEFLGD 1035
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENV 216
A++DFLV YLY+ H SPGE+S ++S MV+N A+ V LH
Sbjct: 1036 AVLDFLVVRYLYDKDEHASPGELSVMKSLMVSNSILAAICVWSGLH-------------- 1081
Query: 217 TRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEY---VDVPK 273
RF ++ + + D E+ E E + RV + +DVPK
Sbjct: 1082 -RFVHVRQQQKQVVWDYEKALRGREA----------AETASTSKEAARVTYFWMDLDVPK 1130
Query: 274 ALGDVFEALV 283
L DV E+++
Sbjct: 1131 VLSDVIESII 1140
Score = 37.7 bits (86), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 4/72 (5%)
Query: 118 KRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPG 177
K +N+ +D L+ A S P + +Y+RLE LGDA++ +L T Y++ + + G
Sbjct: 779 KNLNHCVKD-DLLIMATSSPLAGND---YNYERLELLGDALLKYLSTTYVFVQNLNGTEG 834
Query: 178 EISDIRSAMVNN 189
E+ R ++N
Sbjct: 835 ELHTARQRFISN 846
>gi|403171947|ref|XP_003331125.2| hypothetical protein PGTG_13088 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169644|gb|EFP86706.2| hypothetical protein PGTG_13088 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1453
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 117/250 (46%), Gaps = 43/250 (17%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNIL-----PQSKIDVHEALYGPHPSA 94
K+ +V++DVVE+L G + GIE + AL++ P S+ V+ L A
Sbjct: 1038 KIPKRVLSDVVEALLGAGFLTGGIELGLKIGTALDLCFGGTTPWSERPVNIGLESITHDA 1097
Query: 95 VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFL 154
L+P + +C LEK+I Y F++K L+QAL+H + N+ +T Y+R E+L
Sbjct: 1098 ---------LEP-SILLKCQALEKKIGYVFKEKLLLVQALTHRSANSF-MTNCYEREEWL 1146
Query: 155 GDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAV-RLDLHKHLLHDSPRLY 213
GDA+ID + + Y+ F H + E++ R+ +V+N + A+ +L L + ++H S
Sbjct: 1147 GDAVIDMWIVEHAYKRFDHATAEELTLARAKVVSNGSLGFLALKKLGLQEIIMHAS---- 1202
Query: 214 ENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPK 273
E E+ E I F IEE D + D PK
Sbjct: 1203 -------------------ENFEQACTEAIEAIKPFAKIEEYFSTID---NLFVVFDPPK 1240
Query: 274 ALGDVFEALV 283
L DV EA+V
Sbjct: 1241 ILNDVLEAIV 1250
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 7/101 (6%)
Query: 112 ECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+ T L KR+++ +QAL+ P + YQ LE LGDA + + ++Y
Sbjct: 927 QATALFKRLDFPTISLLHGIQALTPP---GGGVPWDYQTLETLGDAFLKLATSVHVY--L 981
Query: 172 SHLSPGE--ISDIRSAMVNNVTFASYAVRLDLHKHLLHDSP 210
SHL GE +S +RS V+N A++ +L +L P
Sbjct: 982 SHLKKGEGDMSHVRSRSVDNAYLRRKAIQANLPASILSQHP 1022
>gi|169768544|ref|XP_001818742.1| ATP-dependent helicase dcl2 [Aspergillus oryzae RIB40]
gi|121804870|sp|Q2UNX5.1|DCL2_ASPOR RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
gi|83766600|dbj|BAE56740.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391868391|gb|EIT77606.1| dsRNA-specific nuclease Dicer [Aspergillus oryzae 3.042]
Length = 1377
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 88/153 (57%), Gaps = 19/153 (12%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAML----FLQALNILPQSKIDVHEALYGPHPSAV 95
++ KV+ADV+E+L G G A + FL +N P +D+ PS +
Sbjct: 1030 QMSAKVLADVIEALIGAAYLDGGHSKAQICTHCFLPEVNRQP---LDI--------PSLI 1078
Query: 96 RCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLG 155
E R R+I + L++ + YTF+++ L++AL+HP+ ++ T SYQRLEFLG
Sbjct: 1079 TQTEHGR---TARHIID-GDLQRHLGYTFKNEDLLIEALTHPSCQHDQTTQSYQRLEFLG 1134
Query: 156 DAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
DAI+D ++ +++ + +SPG+++ I+ A+VN
Sbjct: 1135 DAILDMVIVPIIFQYSNKISPGDMTLIKHAVVN 1167
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 124 FQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIR 183
F D ++ A+ P+ T+YQR EFLGD+I+ ++V+ L+ + G +++ R
Sbjct: 925 FADIQHVITAIMAPSAQG---VTNYQRYEFLGDSILKYIVSCQLFFQNLNWPEGFLTEGR 981
Query: 184 SAMVNNVTFASYAVRLDLHKHLLHD--SPRLY 213
+ +V N A+ L ++ +PR +
Sbjct: 982 TTIVQNPRLTRAALDAGLDSFIITKALTPRRW 1013
>gi|152989964|ref|YP_001355686.1| ribonuclease III [Nitratiruptor sp. SB155-2]
gi|189043328|sp|A6Q1H0.1|RNC_NITSB RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|151421825|dbj|BAF69329.1| ribonuclease III [Nitratiruptor sp. SB155-2]
Length = 226
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 64/97 (65%), Gaps = 3/97 (3%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+ + + EK++ Y+F+DK L +AL+H +Y + + +RLEFLGDA++D +V YL++
Sbjct: 1 MKQLEEFEKKLGYSFEDKKLLKEALTHKSYKS---PVNNERLEFLGDAVLDLVVGEYLFK 57
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
F + GE+S +R+++VN FA A +LD+ K++
Sbjct: 58 KFPKANEGELSKLRASLVNEEGFAKLAQKLDIGKYIF 94
>gi|396464039|ref|XP_003836630.1| similar to dicer-like protein 2 [Leptosphaeria maculans JN3]
gi|312213183|emb|CBX93265.1| similar to dicer-like protein 2 [Leptosphaeria maculans JN3]
Length = 1393
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 114/261 (43%), Gaps = 41/261 (15%)
Query: 37 DRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQ--SKIDVHEALY-----G 89
+++KL K++ADVVES+ G G A +Q L L S D + LY G
Sbjct: 1024 NKVKLSSKLIADVVESIIGASFVVGGFPKAFACIQTLLPLENWISIPDANNILYDFAQEG 1083
Query: 90 PHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ 149
P + + + LE+ I +TF K LL A++H +Y + YQ
Sbjct: 1084 PTFTGL------------------STLERLIGHTFSKKFLLLDAITHASYLGPNVHCDYQ 1125
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
R EFLGDA++DF++T LY + L + IR+AMVN A + +HL + +
Sbjct: 1126 RTEFLGDAVLDFIITKRLYAHTPPLEHQTMHAIRTAMVNASFLAFRMFETTIDEHLTNKA 1185
Query: 210 -------PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVY 262
R R Q EI+ ++ +E + +V E+D + +
Sbjct: 1186 TLQTDVQSRALWQFLRSGAPQVNAAREIAFKQHQEARGQILVAL-------ERDARYPWH 1238
Query: 263 GRVVEYVDVPKALGDVFEALV 283
++ D PK L D+ E+++
Sbjct: 1239 --LLALTDPPKFLSDIVESVL 1257
>gi|256077012|ref|XP_002574802.1| ribonuclease III [Schistosoma mansoni]
Length = 907
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 84/163 (51%), Gaps = 26/163 (15%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPE 99
+L DK +AD+VE+L G +L G+ A L I P+ +++++ +
Sbjct: 637 RLTDKSLADMVEALIGCFLLRSGLSAAFNLLHYFQICPEIILELNQRFF----------- 685
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAII 159
QL++++ Y F+ L +A++H + + +YQRLEFLGD+I+
Sbjct: 686 ---------------QLQEKLGYYFKGIELLAEAMTHQSSINKQYWGNYQRLEFLGDSIL 730
Query: 160 DFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLH 202
+++ YL++ + SPG ++ RS +V+N+ A+ V D++
Sbjct: 731 GHIISNYLFQKCPNSSPGALTTARSTVVSNINLANVVVEHDIY 773
>gi|336367926|gb|EGN96270.1| hypothetical protein SERLA73DRAFT_112480 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1460
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 115/250 (46%), Gaps = 52/250 (20%)
Query: 38 RIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAV-- 95
R + + + D +E+ G + GI+ A+ AL + + GP P ++
Sbjct: 1074 RREFPRRSLQDCMEATLGAAFVTGGIDMALQAGTALGL----------SFGGPIPWSLKY 1123
Query: 96 -RCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFL 154
R PE + P ++ L++ + Y F L++A +HP++ A ++SYQRLEFL
Sbjct: 1124 SRRPESS----PAPHL--FADLQESLCYEFHRGDLLVEAATHPSF-ATSASSSYQRLEFL 1176
Query: 155 GDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAV-RLDLHKHLLHDSPRLY 213
GDA+ID +V YLY F + G++S RS V T AS +V RL LHK LL ++ L
Sbjct: 1177 GDAVIDLVVLNYLYRRFPQANSGQLSAARSRAVCGPTLASISVRRLCLHKILLVNNVELS 1236
Query: 214 ENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPK 273
+ R ++E V+ D+ + +Y D PK
Sbjct: 1237 SAINRHVP-----------------------------ILESTSVE-DIINKGWKY-DPPK 1265
Query: 274 ALGDVFEALV 283
AL DV E++V
Sbjct: 1266 ALSDVLESVV 1275
Score = 43.5 bits (101), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 129 FLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
L++A + PT + +T + QRLE LGD+++ T ++ + H G++S +R V+
Sbjct: 971 LLIEASTLPTTS---LTFNNQRLETLGDSVLKLGSTVHIMNKYPHRHEGQLSHLRQNSVS 1027
Query: 189 NVTFASYAVRLDLHKHLLHDSPRLY 213
N T S A ++L + L +S L+
Sbjct: 1028 NRTLLSRAKEIELERFLNSESHNLH 1052
>gi|440632208|gb|ELR02127.1| hypothetical protein GMDG_05286 [Geomyces destructans 20631-21]
Length = 1377
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 87/170 (51%), Gaps = 24/170 (14%)
Query: 22 VSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKI 81
SSPEK L KV+ADVVE+L G G E A + LP+ +I
Sbjct: 1026 ASSPEKR-----------TLSTKVLADVVEALIGGAFLDRGYEAAATCIS--RFLPEMRI 1072
Query: 82 DVHEALY--GPHPSAVRCPEQ-ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPT 138
++ G H +V P A G +E+ I Y F+++ +LL+A++HP+
Sbjct: 1073 TAPLDIFARGIHTESVFAPTSLANG--------HLADVERLIGYQFKNRGYLLEAITHPS 1124
Query: 139 YNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
+ T+SYQRLEF+GDA +D +V +++ +N LS G + ++A+VN
Sbjct: 1125 CEHDSHTSSYQRLEFIGDATLDMIVVSFMIDNAPELSHGRMHLTKTAVVN 1174
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 28/189 (14%)
Query: 121 NYTFQDKSFL-----LQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
N F+D+ FL + A + P+ N N ++YQRLEF+GD+++ +LV LY +
Sbjct: 918 NAVFEDQGFLNLDYVITATNAPSANEN---SNYQRLEFIGDSVLKYLVCVNLYASQPSWP 974
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD-------SPRLYENVTRFAQNQEAR-- 226
G +S + V N + A+ + L ++++ SP +++ A + E R
Sbjct: 975 EGYLSRAKDQAVANSHLSRAALAVGLDRYIVTKTFTARKWSPPYIQDILDAASSPEKRTL 1034
Query: 227 -NHEISDEEEE-------EEEEEGIVRCLIFFLIEEK-DVQTDVYGRVV--EYVDVPKAL 275
++D E + E C+ FL E + D++ R + E V P +L
Sbjct: 1035 STKVLADVVEALIGGAFLDRGYEAAATCISRFLPEMRITAPLDIFARGIHTESVFAPTSL 1094
Query: 276 GDVFEALVE 284
+ A VE
Sbjct: 1095 ANGHLADVE 1103
>gi|336380656|gb|EGO21809.1| hypothetical protein SERLADRAFT_441040 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1460
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/250 (29%), Positives = 115/250 (46%), Gaps = 52/250 (20%)
Query: 38 RIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAV-- 95
R + + + D +E+ G + GI+ A+ AL + + GP P ++
Sbjct: 1074 RREFPRRSLQDCMEATLGAAFVTGGIDMALQAGTALGL----------SFGGPIPWSLKY 1123
Query: 96 -RCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFL 154
R PE + P ++ L++ + Y F L++A +HP++ A ++SYQRLEFL
Sbjct: 1124 SRRPESS----PAPHL--FADLQESLCYEFHRGDLLVEAATHPSF-ATSASSSYQRLEFL 1176
Query: 155 GDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAV-RLDLHKHLLHDSPRLY 213
GDA+ID +V YLY F + G++S RS V T AS +V RL LHK LL ++ L
Sbjct: 1177 GDAVIDLVVLNYLYRRFPQANSGQLSAARSRAVCGPTLASISVRRLCLHKILLVNNVELS 1236
Query: 214 ENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPK 273
+ R ++E V+ D+ + +Y D PK
Sbjct: 1237 SAINRHVP-----------------------------ILESTSVE-DIINKGWKY-DPPK 1265
Query: 274 ALGDVFEALV 283
AL DV E++V
Sbjct: 1266 ALSDVLESVV 1275
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 129 FLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
L++A + PT + +T + QRLE LGD+++ T ++ + H G++S +R V+
Sbjct: 971 LLIEASTLPTTS---LTFNNQRLETLGDSVLKLGSTVHIMNKYPHRHEGQLSHLRQNSVS 1027
Query: 189 NVTFASYAVRLDLHKHLLHDSPRLY 213
N T S A ++L + L +S L+
Sbjct: 1028 NRTLLSRAKEIELERFLNSESHNLH 1052
>gi|342872111|gb|EGU74508.1| hypothetical protein FOXB_14953 [Fusarium oxysporum Fo5176]
Length = 1500
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 95/207 (45%), Gaps = 17/207 (8%)
Query: 2 EFLSNLDFD---LYQD-PTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVY 57
EF+ + FD Y D P + GK P +S L DK +ADV E+L G
Sbjct: 1100 EFVRSKAFDRRTWYPDLPLKKGKA-------PKTSMKH----NLADKTIADVCEALIGAA 1148
Query: 58 LRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLE 117
+ L ++A+ + +SK +A + + A + PE G ++
Sbjct: 1149 YLTSKASNMDLAVKAVTRMTKSKNHRMKA-FKDYYKAYKVPEWQEGNASASQRSLVQKVA 1207
Query: 118 KRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPG 177
+ Y F+ + A HP++ + YQRLEFLGD+++D + YLY+NF P
Sbjct: 1208 QATGYRFKSAQLVQSAFKHPSWPYESVP-DYQRLEFLGDSLLDMAIVDYLYQNFPRADPQ 1266
Query: 178 EISDIRSAMVNNVTFASYAVRLDLHKH 204
+++ + AMV+N V+L LH+H
Sbjct: 1267 WLTEHKMAMVSNQFLECLCVKLGLHQH 1293
>gi|403417815|emb|CCM04515.1| predicted protein [Fibroporia radiculosa]
Length = 1463
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/175 (34%), Positives = 87/175 (49%), Gaps = 16/175 (9%)
Query: 33 YNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHP 92
Y ++ R+ + + D +E+L G + GI A+ AL + + GP P
Sbjct: 1048 YRYVPRV-FPRRSLQDCMEALLGAAFVAGGIPMALRAGTALGL----------SFGGPLP 1096
Query: 93 SAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLE 152
R Q P+ + T L+ + Y F+ LL+A++HP++ A T+SYQRLE
Sbjct: 1097 WNARYGGQI-AESPVTVL--FTDLQDTLGYRFRCGKLLLEAVTHPSFGAAE-TSSYQRLE 1152
Query: 153 FLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAV-RLDLHKHLL 206
FLGDA+ID V YLY F + G++S RS V AS AV RL L K LL
Sbjct: 1153 FLGDALIDLTVMRYLYNKFPEATSGQLSWARSRAVCAPALASVAVKRLGLQKLLL 1207
Score = 46.2 bits (108), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 129 FLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
L+QAL+ P+ NA + QRLE LGD+++ YL+ + H G++ +R V+
Sbjct: 951 LLVQALTLPSANAG---FNNQRLETLGDSVLKLATVVYLFNKYPHRHEGQLDVLRRNSVS 1007
Query: 189 NVTFASYAVRLDLHKHL 205
N T + A + L ++L
Sbjct: 1008 NRTLLARAKEVGLEQYL 1024
>gi|134084339|emb|CAK48679.1| unnamed protein product [Aspergillus niger]
Length = 1531
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 105/203 (51%), Gaps = 16/203 (7%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKIDVHEA-LYGPHPSAVRCP 98
L +K +ADV E+L G L S G + + ++A+ L S H+A + + S P
Sbjct: 1161 LAEKTIADVCEALIGAALLSGGPDHRFDMAVKAVTTLVNSP--SHKAERWKDYISFYTIP 1218
Query: 99 E-QARGLDPLR-YIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLG 155
+ Q R D Y+ ++E++++Y F+ + L A +HP+Y +A YQRLEFLG
Sbjct: 1219 KYQRRAADGAELYLSR--KIEEKLSYRFRYPTLLGSAFTHPSYPSAWAKVPCYQRLEFLG 1276
Query: 156 DAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYEN 215
D++ID + L+ F P +++ + AMV+N + AV+L LH HL + S L
Sbjct: 1277 DSLIDMVCVEDLFARFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLKYFSAPLQSQ 1336
Query: 216 VTRFAQNQEARNHEISDEEEEEE 238
+T++A+ EI E E E
Sbjct: 1337 ITQYAE-------EIQTAEGESE 1352
>gi|152993835|ref|YP_001359556.1| ribonuclease III [Sulfurovum sp. NBC37-1]
gi|189043369|sp|A6QCJ0.1|RNC_SULNB RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|151425696|dbj|BAF73199.1| ribonuclease III [Sulfurovum sp. NBC37-1]
Length = 223
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
+QLEKR+NYTF+DK +++AL+H +Y + + +RLEFLGDA++D +V YL++ F
Sbjct: 5 SQLEKRLNYTFKDKQLIIEALTHKSY---KKPYNNERLEFLGDAVLDLIVGEYLFKKFPK 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G +S IR+++VN F A ++DL ++
Sbjct: 62 SDEGILSKIRASLVNESGFTLLARKIDLGSYI 93
>gi|310798327|gb|EFQ33220.1| RNase3 domain-containing protein [Glomerella graminicola M1.001]
Length = 1532
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 90/184 (48%), Gaps = 3/184 (1%)
Query: 38 RIKLGDKVVADVVESLTGV-YLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVR 96
R L DK +ADV E+L G YL + ++A+ + ++K + + +G + +A
Sbjct: 1163 RHALADKSIADVCEALIGAAYLSYAETNNFDMAIRAVTAMVKNKNHLMTS-WGDYYTAYT 1221
Query: 97 CPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLG 155
G Q+++ + Y F+ + L A HP+Y A +YQRLEFLG
Sbjct: 1222 PSAWQSGHSTAMQKELARQIKENLGYEFKYPALLRSAFKHPSYPRAYEDLPNYQRLEFLG 1281
Query: 156 DAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYEN 215
DA++D + +L++ F P +++ ++AMV+N A V+L LHKH+L L
Sbjct: 1282 DALLDMVCVDFLFKKFPDADPQWLTEHKTAMVSNQFLACLCVQLGLHKHVLSGHASLLNQ 1341
Query: 216 VTRF 219
F
Sbjct: 1342 TQDF 1345
>gi|403179645|ref|XP_003337958.2| hypothetical protein PGTG_19535 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375165150|gb|EFP93539.2| hypothetical protein PGTG_19535 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1431
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 60/207 (28%), Positives = 110/207 (53%), Gaps = 28/207 (13%)
Query: 10 DLYQDP-TEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAML 68
D ++D TEDGK+ LP+ +++ + +V++DVVE+L G + GIE +
Sbjct: 1024 DRFRDAQTEDGKE------LPNGNFSR----NVPRRVLSDVVEALLGAGFLTGGIELGLK 1073
Query: 69 FLQALNIL-----PQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYT 123
AL++ P ++ ++ A G A + +C LE++I Y
Sbjct: 1074 IGTALDLCFGGTTPWNERTLNIAFEG----------TAHDKLASSILLKCQALEEKIGYV 1123
Query: 124 FQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIR 183
F++K L+QAL+H + N+ +T Y+R E+LGDA++D + + Y+ F + + E++ R
Sbjct: 1124 FKEKLLLVQALTHRSANSF-MTNCYEREEWLGDAVVDMWIVQHAYKRFDNATAEELTLAR 1182
Query: 184 SAMVNNVTFASYAV-RLDLHKHLLHDS 209
+ +V+N + A+ +L LHK ++H S
Sbjct: 1183 AKLVSNGSLGFLAIKKLGLHKVIMHKS 1209
>gi|321451187|gb|EFX62921.1| hypothetical protein DAPPUDRAFT_336204 [Daphnia pulex]
Length = 158
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 64/127 (50%)
Query: 106 PLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTA 165
P + + E+ Y F+D+ L QAL PT + RLE +GDA++ LV+
Sbjct: 16 PPKPVTAAVYFEEIFGYKFKDEEMLHQALKRPTASLKSSVKKGDRLELVGDAVLGILVSI 75
Query: 166 YLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEA 225
L+ + +PG+++ RSA+ N F V+ +HK LL P L NV FA+NQE
Sbjct: 76 GLFRTITMYNPGDLTRHRSALTCNDCFGVLTVKFGIHKFLLGLPPSLLHNVNEFAENQEK 135
Query: 226 RNHEISD 232
H S+
Sbjct: 136 AAHPYSN 142
>gi|390598592|gb|EIN07990.1| hypothetical protein PUNSTDRAFT_144457 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1435
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 94/180 (52%), Gaps = 20/180 (11%)
Query: 30 SSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYG 89
++S F+ R + + + D +E+ G GI A LQA +L S L G
Sbjct: 1056 TTSARFVAR-SIPRRCLQDCMEATLGAAFLGGGIPMA---LQAGTVLGMS-------LGG 1104
Query: 90 PHPSAVRCPEQARGLDPLRYIPECT--QLEKRINYTFQDKSFLLQALSHPTYNANRITTS 147
P P +R G P+ P ++++ ++Y F + L++A +HP++ + S
Sbjct: 1105 PVPWNLR-----YGRKPIGKTPAALFHRVQEALHYDFHNGDLLIEASTHPSFESGTFG-S 1158
Query: 148 YQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAV-RLDLHKHLL 206
YQRLEFLGDA+ID +V YLY F +PG++S RS V + T A AV +L+L+K +L
Sbjct: 1159 YQRLEFLGDALIDLVVMQYLYRKFPEGTPGQLSWARSRAVCSQTMAWVAVTQLELNKIML 1218
>gi|384494893|gb|EIE85384.1| hypothetical protein RO3G_10094 [Rhizopus delemar RA 99-880]
Length = 407
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 97/188 (51%), Gaps = 15/188 (7%)
Query: 34 NFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEAL---YGP 90
++L + D +AD++ES G S I+GA+ L LP I V L + P
Sbjct: 162 HWLTHHLVSDNTLADIIESTVGAAFLSQSIDGAIYAATQLK-LPLGSIKVWSDLRHIWTP 220
Query: 91 HPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQR 150
P++ A G + + ++ + + Y F++ + +AL+H + + + Y+R
Sbjct: 221 SPAS------ATGQINI----DVVRVGEMLGYQFKNYLLVQEALTHGSV-MDSLVPCYER 269
Query: 151 LEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSP 210
LEFLGDAI+DF VT Y+Y+ +PG + ++R + VN+ ++ + + L KH++H S
Sbjct: 270 LEFLGDAILDFFVTQYIYQKHPTAAPGILHNLRKSSVNHHILSAVCLNMGLDKHIIHVSA 329
Query: 211 RLYENVTR 218
+ ++ +
Sbjct: 330 EIAASILK 337
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 65/113 (57%), Gaps = 8/113 (7%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
QL+ N F D +L+A + P+ ANR Y+RLEFLGDA++ F+V++YLY +
Sbjct: 49 QLKTVHNLQFIDDELMLEAFTSPS--ANR-KQDYERLEFLGDAVLKFIVSSYLYAKYPTY 105
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARN 227
S E++ +R M +N +FA+ A L LH++++ S V RF + +N
Sbjct: 106 SEAELTSLRQVMTSNKSFANIAKDLKLHRYIISQS-----TVRRFWRPPHFQN 153
>gi|443893959|dbj|GAC71147.1| dsRNA-specific nuclease Dicer and related ribonucleases [Pseudozyma
antarctica T-34]
Length = 1764
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 93/185 (50%), Gaps = 7/185 (3%)
Query: 43 DKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQS--KIDVHEALYGPHPSAVRCPEQ 100
+K + DVVE+L G L G + A+ + L ++P+S ++D L ++
Sbjct: 1402 EKTLPDVVEALIGAALLGGGTDAALHVCRVLTLIPESIRRLDDFNTLL----QELKLTSV 1457
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
+G + L+ + ++ L+A +HP+ A+ + SYQRLEFLGDA +D
Sbjct: 1458 TQGWERRVDRSGLDHLQSLFGHVYRYPHLGLEAFTHPSLLAS-VLPSYQRLEFLGDAWLD 1516
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
+ Y++ LSPGE++ ++ + +N T A+ RL LH+++ +S L ++ ++
Sbjct: 1517 LYIVRYIFSAHPDLSPGELTALKGMLASNSTLAALGHRLGLHRYVASNSEVLVSTLSAYS 1576
Query: 221 QNQEA 225
E
Sbjct: 1577 TAMEG 1581
>gi|317150438|ref|XP_001824024.2| dicer-like protein 1 [Aspergillus oryzae RIB40]
gi|158706453|sp|Q2U6C4.2|DCL1_ASPOR RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1523
Score = 80.5 bits (197), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 7/193 (3%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKIDVHEAL-YGPHPSAVRCP 98
L +K VADV E+L G L S G+ + ++A+ + S H+AL + + S+ P
Sbjct: 1169 LREKTVADVCEALIGASLLSGGLHNQFDMAVKAVTAVVDSP--NHKALCWADYTSSYMLP 1226
Query: 99 E-QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITT-SYQRLEFLGD 156
+ Q + D + ++E+++ Y F+ L A +HP+Y + YQRLEFLGD
Sbjct: 1227 KYQTQSPDGYE-LDLGRKVEEKLGYRFKYPRLLHSAFTHPSYPSTWAKVPCYQRLEFLGD 1285
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENV 216
+++D + L+ + P +++ + AMV+N + AV+L LH HL H S L +
Sbjct: 1286 SLLDMVCVDDLFYRYPDKDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLRHFSNPLQSQI 1345
Query: 217 TRFAQNQEARNHE 229
T +A+ +A +E
Sbjct: 1346 THYAEEIQAAENE 1358
>gi|330944921|ref|XP_003306459.1| hypothetical protein PTT_19601 [Pyrenophora teres f. teres 0-1]
gi|311316023|gb|EFQ85435.1| hypothetical protein PTT_19601 [Pyrenophora teres f. teres 0-1]
Length = 1448
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/160 (35%), Positives = 84/160 (52%), Gaps = 24/160 (15%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKI----DVHEALY--GPHPSAVRC 97
K++ADV+ESL G G A +Q L LP K + E LY PH V
Sbjct: 1103 KLIADVIESLIGASYIIGGFSKAFACVQTL--LPLEKWTPLAEAKEILYNAAPHQDTV-- 1158
Query: 98 PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
+ GL +EK + Y F +K+ LL+AL+H T+ SY+R EFLGDA
Sbjct: 1159 --MSLGL-----------IEKLLGYKFNNKALLLEALTHVTFRGLNTNCSYERHEFLGDA 1205
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAV 197
++D++V+ LY + LS ++ IR+AMV N +F +Y++
Sbjct: 1206 VLDYIVSRKLYAHKPELSHRKMHGIRTAMV-NASFLAYSM 1244
>gi|449543396|gb|EMD34372.1| hypothetical protein CERSUDRAFT_55073 [Ceriporiopsis subvermispora B]
Length = 1702
Score = 80.5 bits (197), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 84/164 (51%), Gaps = 15/164 (9%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARG 103
+ + D +E+ G + GI+ A+ AL + + GP P R +
Sbjct: 1066 RSIQDCMEATLGAAFATGGIQMALRAGTALGL----------SFGGPLPWTARYGGRLPA 1115
Query: 104 LDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLV 163
D P T+L++ + + F+ LL+A++HP++ + TTSYQRLEFLGDA+ID +V
Sbjct: 1116 KDA---SPLFTELQEVLGHQFKHGQLLLEAVTHPSFGSYE-TTSYQRLEFLGDALIDLVV 1171
Query: 164 TAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVR-LDLHKHLL 206
YLY + + G++S RS V A AV L+LHK +L
Sbjct: 1172 MRYLYFKYPRATSGQLSWARSRAVCASALAWVAVNCLELHKMML 1215
>gi|46117132|ref|XP_384584.1| hypothetical protein FG04408.1 [Gibberella zeae PH-1]
Length = 1451
Score = 80.1 bits (196), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 21/154 (13%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHE------ALYGPHPSA 94
+G K +ADVVE+L G + GI A L+ + + +K + H+ L+ S
Sbjct: 1091 VGPKTLADVVEALVGASYQDGGISKA---LECIKVFLGTKCNWHDDKVARDILFRAAISD 1147
Query: 95 VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFL 154
V P P LE+ I YTFQ KS L++A++H +Y A+ SY++LEFL
Sbjct: 1148 VPLP------------PTMEPLEELIGYTFQKKSLLIEAMTHGSYAADGQQRSYEQLEFL 1195
Query: 155 GDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
GDA++D++V ++++ + G + +++AM N
Sbjct: 1196 GDAVLDYIVVTRMFQSDPPVPNGRLHMVKTAMAN 1229
>gi|327399771|ref|YP_004340640.1| ribonuclease 3 [Hippea maritima DSM 10411]
gi|327182400|gb|AEA34581.1| Ribonuclease 3 [Hippea maritima DSM 10411]
Length = 234
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 65/103 (63%), Gaps = 1/103 (0%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+ E+R+ YTF++K L +AL+H +Y ++ S +RLEFLGDA+++ +VT +L N+ ++
Sbjct: 12 EFEERLGYTFKNKELLKRALTHRSYVKDK-AKSNERLEFLGDAVLELVVTEFLINNYKNI 70
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
G++S IR+A VN T + A +L+L +L E +T
Sbjct: 71 DEGKLSKIRAASVNTKTLSKLARKLELSDQILVGRSEKKEGIT 113
>gi|389749088|gb|EIM90265.1| hypothetical protein STEHIDRAFT_93138 [Stereum hirsutum FP-91666 SS1]
Length = 1500
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 69/115 (60%), Gaps = 3/115 (2%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
L++R+ YTF++ L++A++HP++ SYQRLEFLGDA+ID V +YLY F +
Sbjct: 1166 LQERLGYTFRNPELLVEAMTHPSFATG--GQSYQRLEFLGDAVIDLTVMSYLYNKFPSAT 1223
Query: 176 PGEISDIRSAMVNNVTFASYAVR-LDLHKHLLHDSPRLYENVTRFAQNQEARNHE 229
G++S R+ V+ +S AV+ L LHK +L + L + ++ E ++E
Sbjct: 1224 SGKLSTARARAVSAPVLSSIAVKHLGLHKLMLVNETNLSIAMGKYLPTLEETSYE 1278
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 47/102 (46%), Gaps = 12/102 (11%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSY-----------QRLEFLGDAIIDFLV 163
+L RIN F+ +S L AL P N + + +Y QR E LGD+++
Sbjct: 951 RLLHRINDVFRAQSAQL-ALGLPPINTDLLIEAYTIPAARTGWNNQRFETLGDSVLKLCT 1009
Query: 164 TAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
+ +++ + G++S +R ++N+T A + L L
Sbjct: 1010 SVHVFNKYPWRHEGQLSVLRQVAISNMTLLRKAKAVSLESFL 1051
>gi|269115408|gb|ACZ26274.1| dicer-1-like protein [Mayetiola destructor]
Length = 227
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 65/108 (60%), Gaps = 1/108 (0%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLY-ENFSH 173
Q+EK++NYTF+DKSF+LQA SH ++ AN I +Y L+F+GD II++L+ +L+ E
Sbjct: 10 QIEKKLNYTFRDKSFMLQAFSHESFTANDICPNYDSLDFVGDGIINYLLCRHLFREAGGQ 69
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQ 221
S EI + + +N FA+ ++R +H +L ++ F +
Sbjct: 70 FSANEIEFFTNTLKSNCCFATVSIRHGIHNFFRLMDTKLNGSLASFVK 117
>gi|119487463|ref|XP_001262524.1| RNA helicase/RNAse III, putative [Neosartorya fischeri NRRL 181]
gi|158705692|sp|A1D9Z6.1|DCL2_NEOFI RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
gi|119410681|gb|EAW20627.1| RNA helicase/RNAse III, putative [Neosartorya fischeri NRRL 181]
Length = 1388
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/176 (31%), Positives = 96/176 (54%), Gaps = 25/176 (14%)
Query: 19 GKKVSSP------EKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQA 72
+K S+P E++P+ + ++ KV+ADVVE+L G G A ++
Sbjct: 1017 SRKWSAPLISEKLERVPA-------KRQMSTKVLADVVEALIGAAYMDGGHATAQACIRR 1069
Query: 73 LNILPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQ 132
L LP+ I++H +V PE AR + R L+ I YTF+D+S L++
Sbjct: 1070 L--LPE--INLHAVDTRTATRSV-APESARHMMNER-------LKDHIGYTFEDESLLVE 1117
Query: 133 ALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
AL+HP+ + + T SYQRLE+LGDA++D ++ + ++ + G+++ I+ A+VN
Sbjct: 1118 ALTHPSCDYDSTTQSYQRLEYLGDAVLDMVIVSAIFNHPIQRPQGDMTKIKHAVVN 1173
Score = 44.3 bits (103), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 124 FQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIR 183
F+ ++ A+S P +A T+YQR EFLGD+I+ F V+ L+ + G +S+ R
Sbjct: 932 FKSTDHIITAISTPFAHA---LTNYQRYEFLGDSILKFSVSCQLFFQHPNWHEGYLSEGR 988
Query: 184 SAMVNNVTFASYAVRLDLHKHLL 206
+ +V N A A+ L +++
Sbjct: 989 AMIVQNPRLAKAALDTGLDAYIV 1011
>gi|258567596|ref|XP_002584542.1| predicted protein [Uncinocarpus reesii 1704]
gi|237905988|gb|EEP80389.1| predicted protein [Uncinocarpus reesii 1704]
Length = 1055
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 94/209 (44%), Gaps = 3/209 (1%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKIDVHEALYGPHPSAVRCPE 99
L DK +ADV E+L G S G + ++A+ + S D + + + + P
Sbjct: 791 LADKTIADVCEALIGASYLSGGKSHRFDMAVRAVTVFVNSS-DHNVSDWQDYSKLYALPR 849
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLGDAI 158
+ I Q+++++ Y F+ L A +H +Y +A YQRLEFLGD++
Sbjct: 850 YQTAVSDPAEIDLVAQIKEKLGYQFKYPKLLRSAFTHSSYPSAWAAVPCYQRLEFLGDSL 909
Query: 159 IDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTR 218
+D +LY + P +++ + AMV+N AV+L LH HL H S + +
Sbjct: 910 LDMACVEHLYHRYPDKDPQWLTEHKMAMVSNKFLGCVAVKLGLHPHLRHFSAPIQSQIAT 969
Query: 219 FAQNQEARNHEISDEEEEEEEEEGIVRCL 247
+ + EA E D + +CL
Sbjct: 970 YVEEIEAAELESGDSPDAWTSTSDPPKCL 998
>gi|121714731|ref|XP_001274976.1| RNA helicase/RNAse III, putative [Aspergillus clavatus NRRL 1]
gi|158706439|sp|A1C9M6.1|DCL2_ASPCL RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
gi|119403130|gb|EAW13550.1| RNA helicase/RNAse III, putative [Aspergillus clavatus NRRL 1]
Length = 1389
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 86/149 (57%), Gaps = 12/149 (8%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPE 99
++ KV+ADVVE+L G G A ++ LP+ I++H +L S PE
Sbjct: 1038 QVSSKVLADVVEALIGAAYMDGGHAAAQACIR--RFLPE--INLH-SLDTRTLSRSVAPE 1092
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAII 159
AR R L++ I+YTF+++S L++AL+HP+ + + T SYQRLEFLGDA++
Sbjct: 1093 GARQTIHDR-------LKRHISYTFENESLLVEALTHPSCDYDASTQSYQRLEFLGDAVL 1145
Query: 160 DFLVTAYLYENFSHLSPGEISDIRSAMVN 188
D ++ + ++ + + G ++ I+ A+VN
Sbjct: 1146 DMIIVSAIFNHPVQMPQGHMTKIKHALVN 1174
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 11/117 (9%)
Query: 124 FQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIR 183
F ++ A+S P+ A T+YQR EFLGD+I+ F V+ L+ + G +S+ R
Sbjct: 933 FTSTQHIITAISAPSAQA---LTNYQRYEFLGDSILKFSVSCQLFFKHPNWHEGYLSEGR 989
Query: 184 SAMVNNVTFASYAVRLDLHKHLL--------HDSPRLYENVTRFAQNQEARNHEISD 232
+V N A+ L ++ +P + E + R A ++ + ++D
Sbjct: 990 DEIVQNPRLTKAALDTGLDAFVITKMFTPRKWSAPLISERLERVAGKRQVSSKVLAD 1046
>gi|158706440|sp|P0C5H7.1|DCL2_EMENI RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
Length = 1429
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 94/181 (51%), Gaps = 24/181 (13%)
Query: 20 KKVSSP---EKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGA----MLFLQA 72
+K S+P EKL +S+ + KV+ADVVE+L G G+ A + FL
Sbjct: 973 RKWSAPLISEKLYASASTR----SMSAKVLADVVEALIGAAYIDGGLHKAQSCIVRFLPE 1028
Query: 73 LNILPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQ 132
+ LP++K+ P P ++ P P ++ + LE I YTF+DK+ L++
Sbjct: 1029 IE-LPETKL--------PRPESM--PMSKDHKKP--HLIQQENLENHIGYTFKDKTLLME 1075
Query: 133 ALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTF 192
AL+HP+ + SYQRLEFLGDA++D L+ + + GE++ I+ A+VN
Sbjct: 1076 ALTHPSCPYDTSIQSYQRLEFLGDAVLDMLIVDLIRAHHVECQQGEMTKIKHAIVNGHLL 1135
Query: 193 A 193
A
Sbjct: 1136 A 1136
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 124 FQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIR 183
FQD ++ A++ P A T YQR EF GD+++ F V A L+ N + G +++
Sbjct: 887 FQDLRHVITAITMPLAQA---PTDYQRYEFFGDSVLKFTVAASLFYNNPNWHEGYLTETL 943
Query: 184 SAMVNNVTFASYAVRLDLHKHLLHD--SPRLY 213
A+V N A+ L +++ + +PR +
Sbjct: 944 HALVQNARLTRAALDQGLDAYIISNRFTPRKW 975
>gi|342879789|gb|EGU81025.1| hypothetical protein FOXB_08500 [Fusarium oxysporum Fo5176]
Length = 580
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 82/154 (53%), Gaps = 21/154 (13%)
Query: 42 GDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEA------LYGPHPSAV 95
G K +ADVVE+L G + G+ A L+ +++ + H+ L+ PS V
Sbjct: 114 GSKTLADVVEALIGASYQDGGLTKA---LKCISVFLGDSCNWHQEGVARDILFAAAPSDV 170
Query: 96 RCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLG 155
+ P L+PL E I Y F+ KS L++A++H +Y A SY++LEFLG
Sbjct: 171 QLPS---NLEPL---------EDLIKYKFKKKSLLIEAVTHGSYAAAMQEKSYEQLEFLG 218
Query: 156 DAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
DAI+D++V ++++ + G + I++A+VN
Sbjct: 219 DAILDYIVVTKMFQHDPPIPTGRLHMIKTAIVNG 252
Score = 40.0 bits (92), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 36/78 (46%), Gaps = 3/78 (3%)
Query: 129 FLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
+L+A+S P+ R YQRLEFLGD+I+ F Y G ++ + +V+
Sbjct: 9 LVLEAVSSPSA---REPVDYQRLEFLGDSILKFCTVTQAYSEHPSWPEGLLNHFKDRLVS 65
Query: 189 NVTFASYAVRLDLHKHLL 206
N + L K +L
Sbjct: 66 NERLQRVCLEKGLSKFIL 83
>gi|158706457|sp|A1CBC9.2|DCL1_ASPCL RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1534
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 44/250 (17%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNIL------PQSKIDVHEALYGPHPS 93
LG+K +ADV E+L G L S G E + ++A+++ S+ + LY P
Sbjct: 1178 LGEKTIADVCEALIGACLLSGGPEHRFDMGVKAVSVFVDSPSHAVSRWKEYIGLYKPPNY 1237
Query: 94 AVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRI--TTSYQRL 151
VR E A L Q+E+++ Y F+ L A++HP+ + YQRL
Sbjct: 1238 QVRKAEGAETNLAL-------QVEEKLGYHFRYPRLLCSAVTHPSTPSTWYFRVPCYQRL 1290
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPR 211
EFLGD+++D + L+ F P +++ + AMV+N + AV+L HKH+ S
Sbjct: 1291 EFLGDSLLDMVCVEDLFHRFPDRDPQWLTEHKMAMVSNKFLGALAVKLGFHKHIKAFSNP 1350
Query: 212 LYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDV 271
L +T + + + E E E EG V ++++ + D
Sbjct: 1351 LQAQITYY----------VEEIETAEAESEGAVD---YWVVAK---------------DP 1382
Query: 272 PKALGDVFEA 281
PK L D+ EA
Sbjct: 1383 PKCLPDMVEA 1392
>gi|321451362|gb|EFX63042.1| hypothetical protein DAPPUDRAFT_336024 [Daphnia pulex]
Length = 270
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 98/216 (45%), Gaps = 42/216 (19%)
Query: 73 LNILPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQL------EKRINYTFQD 126
+ I+ ++ + EAL P P +++ PL C QL E+ +NY+F D
Sbjct: 64 IKIMKKAVKCLGEALASP------VPPKSKKSKPLT----CNQLSAVKAFEEILNYSFND 113
Query: 127 KSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAM 186
K LL+AL TY + + +YQRLE +GDA FL ++ + S G+IS +RSA
Sbjct: 114 KEVLLEAL---TYGNSIRSLNYQRLEVIGDAAFGFLAALNFFKQSLYHSAGDISQLRSAC 170
Query: 187 VNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRC 246
V N TF A + + H ++ + P L +++ F + E+ N D E E EE
Sbjct: 171 VCNDTFGMLAAKRNFHAYIQNLPPNLVKHLEDFLEFAESENFAPFDRELAENEE------ 224
Query: 247 LIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEAL 282
+ V +P L DVFEA+
Sbjct: 225 -----------------IIATQVAIPTFLADVFEAV 243
>gi|312127786|ref|YP_003992660.1| ribonuclease iii [Caldicellulosiruptor hydrothermalis 108]
gi|311777805|gb|ADQ07291.1| ribonuclease III [Caldicellulosiruptor hydrothermalis 108]
Length = 222
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 69/109 (63%), Gaps = 4/109 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
++EK + Y F+DK+ L AL+H + + Y+RLEFLGDA ++ +V+ YL+ NF L
Sbjct: 3 EIEKALGYKFKDKNLLRLALTHKSATHSN-KNCYERLEFLGDAALELVVSKYLFVNFPDL 61
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQ 223
S GE+++IR+A+V + T + A +L+L H++ E + +F +N+
Sbjct: 62 SEGELTNIRAAVVCSQTLSEVAEKLNLKNHIIFGKR---EKMEKFHENK 107
>gi|121713724|ref|XP_001274473.1| RNase3 domain protein [Aspergillus clavatus NRRL 1]
gi|119402626|gb|EAW13047.1| RNase3 domain protein [Aspergillus clavatus NRRL 1]
Length = 1552
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/250 (28%), Positives = 113/250 (45%), Gaps = 44/250 (17%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNIL------PQSKIDVHEALYGPHPS 93
LG+K +ADV E+L G L S G E + ++A+++ S+ + LY P
Sbjct: 1196 LGEKTIADVCEALIGACLLSGGPEHRFDMGVKAVSVFVDSPSHAVSRWKEYIGLYKPPNY 1255
Query: 94 AVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRI--TTSYQRL 151
VR E A L Q+E+++ Y F+ L A++HP+ + YQRL
Sbjct: 1256 QVRKAEGAETNLAL-------QVEEKLGYHFRYPRLLCSAVTHPSTPSTWYFRVPCYQRL 1308
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPR 211
EFLGD+++D + L+ F P +++ + AMV+N + AV+L HKH+ S
Sbjct: 1309 EFLGDSLLDMVCVEDLFHRFPDRDPQWLTEHKMAMVSNKFLGALAVKLGFHKHIKAFSNP 1368
Query: 212 LYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDV 271
L +T + + + E E E EG V ++++ + D
Sbjct: 1369 LQAQITYY----------VEEIETAEAESEGAVD---YWVVAK---------------DP 1400
Query: 272 PKALGDVFEA 281
PK L D+ EA
Sbjct: 1401 PKCLPDMVEA 1410
>gi|406959925|gb|EKD87146.1| hypothetical protein ACD_37C00027G0006 [uncultured bacterium]
Length = 229
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 59/86 (68%), Gaps = 2/86 (2%)
Query: 123 TFQDKSFLLQALSHPTY-NANR-ITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEIS 180
F++K+ L QAL H +Y N N+ I TS +RLEFLGD+II F+V++YLY+NF + G ++
Sbjct: 15 NFKNKALLNQALVHRSYLNENKEIITSNERLEFLGDSIISFIVSSYLYDNFKNYDEGRLT 74
Query: 181 DIRSAMVNNVTFASYAVRLDLHKHLL 206
++RS +VN + A A LDL LL
Sbjct: 75 NLRSLLVNTKSLADCARELDLGSRLL 100
>gi|358383044|gb|EHK20713.1| hypothetical protein TRIVIDRAFT_171147, partial [Trichoderma virens
Gv29-8]
Length = 1373
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/245 (26%), Positives = 109/245 (44%), Gaps = 11/245 (4%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEAL--YGPHPSAVRCP 98
L K +ADV E+L G + E + ++A+ + S+ H + Y + + + P
Sbjct: 1003 LSHKSIADVCEALIGAAYMTSTTENMDMAVKAVTAMVCSE---HHTMLEYKDYFATFQVP 1059
Query: 99 EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAI 158
+ ++ + Y FQ A HP+Y YQ+LEFLGD +
Sbjct: 1060 KWHGNHVSAAQRLTVDKVAEITGYRFQCAPLARSAFRHPSYVFETNIPDYQQLEFLGDGL 1119
Query: 159 IDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTR 218
+D V +L++ F P +++ ++AMV+N V+L LHKH+L + L ++ R
Sbjct: 1120 LDMAVVDFLFKRFPEADPKWLTEHKTAMVSNQFLGCLCVKLGLHKHILLATSALLGDIGR 1179
Query: 219 FAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDV 278
+A E + EI+ ++ + + G F + Q +E PKAL DV
Sbjct: 1180 YATQLE-QAEEIA-RQKSQGGDLGYTSGGCF----QAGAQPTPQDFWIEVPQPPKALADV 1233
Query: 279 FEALV 283
EALV
Sbjct: 1234 VEALV 1238
>gi|238499729|ref|XP_002381099.1| dicer-1, putative [Aspergillus flavus NRRL3357]
gi|220692852|gb|EED49198.1| dicer-1, putative [Aspergillus flavus NRRL3357]
Length = 605
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 69/245 (28%), Positives = 116/245 (47%), Gaps = 35/245 (14%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKIDVHEAL-YGPHPSAVRCP 98
L +K VADV E+L G L S G+ + ++A+ + S H+AL + + S+ P
Sbjct: 251 LREKTVADVCEALIGASLLSGGLHNQFDMAVKAVTAVVDSP--NHKALCWADYTSSYMLP 308
Query: 99 E-QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITT-SYQRLEFLGD 156
+ Q + D + ++E+++ Y F+ L A +HP+Y + YQRLEFLGD
Sbjct: 309 KYQTQSPDGYE-LDLGRKVEEKLGYRFKYPRLLHSAFTHPSYPSTWAKVPCYQRLEFLGD 367
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENV 216
+++D + L+ + P +++ + AM +N + AV+L LH HL H S L +
Sbjct: 368 SLLDMVCVDDLFYRYPDKDPQWLTEHKMAMASNKFLGALAVKLGLHTHLRHFSNPLQSQI 427
Query: 217 TRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALG 276
T +A+ +A E E +G V ++L+ + D PK L
Sbjct: 428 THYAEEIQA----------AENESQGAVD---YWLVTK---------------DPPKCLP 459
Query: 277 DVFEA 281
D+ EA
Sbjct: 460 DMVEA 464
>gi|297737474|emb|CBI26675.3| unnamed protein product [Vitis vinifera]
Length = 337
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
+E+ INY F++K L +AL+H +Y + SYQRLEF+GDA + ++ Y++ + L
Sbjct: 8 VERIINYKFRNKKLLEEALTHSSYTD---SASYQRLEFIGDAALGCALSNYVFLAYPSLD 64
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
PG++S IR+A ++ A AVR+ L++++ H++ L + V FA
Sbjct: 65 PGQLSLIRAANISTEKLARVAVRVGLYQYVRHNAAALDDKVREFA 109
>gi|169868762|ref|XP_001840952.1| hypothetical protein CC1G_03181 [Coprinopsis cinerea okayama7#130]
gi|116498110|gb|EAU81005.1| hypothetical protein CC1G_03181 [Coprinopsis cinerea okayama7#130]
Length = 2074
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/154 (35%), Positives = 78/154 (50%), Gaps = 18/154 (11%)
Query: 41 LGDKVVADVVESLTGVYLRSCGI----EGAMLFLQALNILPQSKIDVHEALYGPHPSAV- 95
L KV+ADV+ESL G S G E A F L + P P+ V
Sbjct: 1669 LSTKVLADVIESLIGAAYISGGFPLGYECAKFFDLGLK-------------WAPLPTRVD 1715
Query: 96 RCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLG 155
+ + + D + P+ +E + YTF+ K L++AL+H +Y + T SY+R+EF+G
Sbjct: 1716 QILSRVQPEDDIPIPPQLADVEHMLGYTFKRKILLIEALTHASYREHINTISYERMEFIG 1775
Query: 156 DAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
D+I+D +VT LY SPG I RSA+VN
Sbjct: 1776 DSILDMVVTDMLYRAPREYSPGHIHLRRSAVVNG 1809
>gi|259485853|tpe|CBF83228.1| TPA: Dicer-like protein 2 [Includes Endoribonuclease dcl2(EC
3.1.26.-);ATP-dependent helicase dcl2(EC 3.6.1.-)]
[Source:UniProtKB/Swiss-Prot;Acc:P0C5H7] [Aspergillus
nidulans FGSC A4]
Length = 1269
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 94/181 (51%), Gaps = 24/181 (13%)
Query: 20 KKVSSP---EKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGA----MLFLQA 72
+K S+P EKL +S+ + KV+ADVVE+L G G+ A + FL
Sbjct: 813 RKWSAPLISEKLYASASTR----SMSAKVLADVVEALIGAAYIDGGLHKAQSCIVRFLPE 868
Query: 73 LNILPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQ 132
+ LP++K+ P P ++ P P ++ + LE I YTF+DK+ L++
Sbjct: 869 IE-LPETKL--------PRPESM--PMSKDHKKP--HLIQQENLENHIGYTFKDKTLLME 915
Query: 133 ALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTF 192
AL+HP+ + SYQRLEFLGDA++D L+ + + GE++ I+ A+VN
Sbjct: 916 ALTHPSCPYDTSIQSYQRLEFLGDAVLDMLIVDLIRAHHVECQQGEMTKIKHAIVNGHLL 975
Query: 193 A 193
A
Sbjct: 976 A 976
Score = 46.2 bits (108), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 124 FQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIR 183
FQD ++ A++ P A T YQR EF GD+++ F V A L+ N + G +++
Sbjct: 727 FQDLRHVITAITMPLAQA---PTDYQRYEFFGDSVLKFTVAASLFYNNPNWHEGYLTETL 783
Query: 184 SAMVNNVTFASYAVRLDLHKHLLHD--SPRLY 213
A+V N A+ L +++ + +PR +
Sbjct: 784 HALVQNARLTRAALDQGLDAYIISNRFTPRKW 815
>gi|255953957|ref|XP_002567731.1| Pc21g06890 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589442|emb|CAP95586.1| Pc21g06890 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1495
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 94/184 (51%), Gaps = 5/184 (2%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKIDVHEALYGPHPSAVRCP- 98
L +K +ADV E+L G L S G + + ++A+ I S+ + + + SA P
Sbjct: 1140 LAEKTIADVCEALIGASLLSGGDDNRYDMAIKAVTIFVNSQNHTATS-WKDYISAYSIPL 1198
Query: 99 EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYN-ANRITTSYQRLEFLGDA 157
Q R D Q+ +++ Y F+ L A +HP+Y A YQRLEFLGDA
Sbjct: 1199 YQNRAPDGFEK-NLARQIFEKVGYDFKYPRLLRSAFTHPSYPLAWAKVPCYQRLEFLGDA 1257
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
++D + +L+ F + P +++ + AMV+N + AV+L LH HL H S L +
Sbjct: 1258 LLDMVCVEHLFHRFPNRDPQWLTEHKMAMVSNKFLGALAVKLGLHLHLQHFSNPLMIQNS 1317
Query: 218 RFAQ 221
++A+
Sbjct: 1318 KYAE 1321
>gi|358058780|dbj|GAA95743.1| hypothetical protein E5Q_02400 [Mixia osmundae IAM 14324]
Length = 1610
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 22/191 (11%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPE 99
K+ + ++D +ES+ G + G+ AM +A N+ P
Sbjct: 1175 KIQRRALSDCIESILGAAYLTGGLSMAMDTARAFNL----------------PLGDGASW 1218
Query: 100 QARGLDPLR----YIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLG 155
++R ++ R P +LE + Y+F + L+QAL+H +Y + T SY+R EFLG
Sbjct: 1219 RSRSIEARRRERSVSPRIGELEDLVGYSFSNNDCLIQALTHRSY-LSPTTPSYEREEFLG 1277
Query: 156 DAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAV-RLDLHKHLLHDSPRLYE 214
DA++DF LY F ++P ++S +R+ +V N T A+ RL L +++LH++ +
Sbjct: 1278 DAMLDFWAITRLYARFDGITPQQLSRLRALLVCNGTLGYVAMLRLRLGEYVLHNADEFTD 1337
Query: 215 NVTRFAQNQEA 225
+ Q EA
Sbjct: 1338 QLEIAQQQAEA 1348
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 51/93 (54%), Gaps = 3/93 (3%)
Query: 130 LLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
+++AL+ P R SY+ +E LGD+++ L + +LY + S G ++ +R+ V N
Sbjct: 1073 MIEALTLPGSAVGR---SYESIETLGDSVLKVLTSVHLYLAYPLKSEGALTCLRTNSVEN 1129
Query: 190 VTFASYAVRLDLHKHLLHDSPRLYENVTRFAQN 222
V AV L K+L+H+ RL + R A++
Sbjct: 1130 VYLHHKAVESSLGKYLIHERMRLNTWLPRDAEH 1162
>gi|386285114|ref|ZP_10062332.1| ribonuclease III [Sulfurovum sp. AR]
gi|385343967|gb|EIF50685.1| ribonuclease III [Sulfurovum sp. AR]
Length = 223
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 63/92 (68%), Gaps = 3/92 (3%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
+QLE+R+NYTF++K +++AL+H +Y + + +RLEFLGDA++D +V YL+ F +
Sbjct: 5 SQLEERLNYTFKNKQLIIEALTHKSY---KKPYNNERLEFLGDAVLDLIVGEYLFSKFPN 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
+ G +S IR+++VN F A +LDL ++
Sbjct: 62 SNEGILSKIRASLVNESGFTLLARKLDLGSYI 93
>gi|313683639|ref|YP_004061377.1| RNAase III [Sulfuricurvum kujiense DSM 16994]
gi|313156499|gb|ADR35177.1| RNAse III [Sulfuricurvum kujiense DSM 16994]
Length = 226
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 61/91 (67%), Gaps = 3/91 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
L++R+ YTFQ+K L++AL+H +Y + + +RLEFLGDA++D +V YLY+ F
Sbjct: 7 LQERLGYTFQNKELLIEALTHKSY---KQPYNNERLEFLGDAVLDLIVGEYLYKKFRGYD 63
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G++S +R+++VN F S A L+L +H+
Sbjct: 64 EGKLSKMRASLVNEGGFTSLANHLNLGEHIF 94
>gi|225460893|ref|XP_002278706.1| PREDICTED: ribonuclease 3-like protein 2-like [Vitis vinifera]
Length = 364
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 67/105 (63%), Gaps = 3/105 (2%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
+E+ INY F++K L +AL+H +Y + SYQRLEF+GDA + ++ Y++ + L
Sbjct: 35 VERIINYKFRNKKLLEEALTHSSYTD---SASYQRLEFIGDAALGCALSNYVFLAYPSLD 91
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
PG++S IR+A ++ A AVR+ L++++ H++ L + V FA
Sbjct: 92 PGQLSLIRAANISTEKLARVAVRVGLYQYVRHNAAALDDKVREFA 136
>gi|67525463|ref|XP_660793.1| hypothetical protein AN3189.2 [Aspergillus nidulans FGSC A4]
gi|40743766|gb|EAA62953.1| hypothetical protein AN3189.2 [Aspergillus nidulans FGSC A4]
Length = 1726
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/181 (33%), Positives = 92/181 (50%), Gaps = 24/181 (13%)
Query: 20 KKVSSP---EKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGA----MLFLQA 72
+K S+P EKL Y + KV+ADVVE+L G G+ A + FL
Sbjct: 1270 RKWSAPLISEKL----YASASTRSMSAKVLADVVEALIGAAYIDGGLHKAQSCIVRFLPE 1325
Query: 73 LNILPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQ 132
+ LP++K+ P P ++ P P ++ + LE I YTF+DK+ L++
Sbjct: 1326 IE-LPETKL--------PRPESM--PMSKDHKKP--HLIQQENLENHIGYTFKDKTLLME 1372
Query: 133 ALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTF 192
AL+HP+ + SYQRLEFLGDA++D L+ + + GE++ I+ A+VN
Sbjct: 1373 ALTHPSCPYDTSIQSYQRLEFLGDAVLDMLIVDLIRAHHVECQQGEMTKIKHAIVNGHLL 1432
Query: 193 A 193
A
Sbjct: 1433 A 1433
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 47/92 (51%), Gaps = 5/92 (5%)
Query: 124 FQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIR 183
FQD ++ A++ P A T YQR EF GD+++ F V A L+ N + G +++
Sbjct: 1184 FQDLRHVITAITMPLAQA---PTDYQRYEFFGDSVLKFTVAASLFYNNPNWHEGYLTETL 1240
Query: 184 SAMVNNVTFASYAVRLDLHKHLLHD--SPRLY 213
A+V N A+ L +++ + +PR +
Sbjct: 1241 HALVQNARLTRAALDQGLDAYIISNRFTPRKW 1272
>gi|410997180|gb|AFV98645.1| hypothetical protein B649_11670 [uncultured Sulfuricurvum sp.
RIFRC-1]
Length = 226
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 59/89 (66%), Gaps = 3/89 (3%)
Query: 113 CTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
T L++R+ YTFQ+K L++AL+H +Y + + +RLEFLGDA++D +V YLY F
Sbjct: 4 LTTLQERLGYTFQNKELLIEALTHKSY---KQPYNNERLEFLGDAVLDLIVGEYLYSKFR 60
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDL 201
G++S +R+++VN F + A+ LDL
Sbjct: 61 GYDEGKLSKMRASLVNEEGFTALALHLDL 89
>gi|159122296|gb|EDP47418.1| RNA helicase/RNAse III, putative [Aspergillus fumigatus A1163]
Length = 1384
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 55/176 (31%), Positives = 95/176 (53%), Gaps = 25/176 (14%)
Query: 19 GKKVSSP------EKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQA 72
+K S+P E++P+ + ++ KV+ADVVE+L G G A ++
Sbjct: 1013 SRKWSAPLISEKLERVPA-------KRQMSTKVLADVVEALIGAAYVDGGHSTAQACIR- 1064
Query: 73 LNILPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQ 132
LP+ I++H +V PE AR + R L+ I YTF+D+S L++
Sbjct: 1065 -RFLPE--INLHAVDTRTAARSV-APESARHMMNDR-------LKDHIGYTFEDESLLVE 1113
Query: 133 ALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
AL+HP+ + + T SYQRLE+LGDA++D ++ + ++ + G+++ I+ A+VN
Sbjct: 1114 ALTHPSCDYDSTTQSYQRLEYLGDAVLDMVIVSAIFNHRIQRPQGDMTKIKHAVVN 1169
Score = 43.9 bits (102), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 48/86 (55%), Gaps = 3/86 (3%)
Query: 121 NYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEIS 180
+ +F+ ++ A+S P A+R+T +YQR EFLGD+I+ F V+ L+ + G +S
Sbjct: 925 DVSFKSTDHIITAISTPL--AHRLT-NYQRYEFLGDSILKFSVSCQLFFQHPNWHEGYLS 981
Query: 181 DIRSAMVNNVTFASYAVRLDLHKHLL 206
+ R +V N A A+ L +++
Sbjct: 982 EGRDMIVQNPRLAKAALDTGLDAYIV 1007
>gi|367022572|ref|XP_003660571.1| hypothetical protein MYCTH_2299034 [Myceliophthora thermophila ATCC
42464]
gi|347007838|gb|AEO55326.1| hypothetical protein MYCTH_2299034 [Myceliophthora thermophila ATCC
42464]
Length = 1604
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 86/190 (45%), Gaps = 5/190 (2%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEAL--YGPHPSAVR- 96
+L DK +ADV E+L G + F A+ + D + A+ YG + +A R
Sbjct: 1193 QLADKTIADVCEALIGAAYLTAQDRSPSDFDLAVRAVTVMVRDRNHAMSSYGDYYAAYRP 1252
Query: 97 CPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNA-NRITTSYQRLEFLG 155
Q P + I + +R+ Y F+ L A HP Y SYQRLEFLG
Sbjct: 1253 AKWQTVPCSPAQ-IDMAARFRERMGYAFRHPRLLRSAFQHPAYPTFYEGLPSYQRLEFLG 1311
Query: 156 DAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYEN 215
DA++D +L+ F P +++ + AMV+N A AV L HK ++H S ++
Sbjct: 1312 DALLDMACVEFLFRRFPGADPQWLTEHKMAMVSNQFLACLAVYLGFHKSIVHCSSQVQSE 1371
Query: 216 VTRFAQNQEA 225
V F E
Sbjct: 1372 VAGFVAEVEG 1381
>gi|34558193|ref|NP_908008.1| ribonuclease III [Wolinella succinogenes DSM 1740]
gi|81653364|sp|Q7M840.1|RNC_WOLSU RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|34483912|emb|CAE10908.1| RIBONUCLEASE III [Wolinella succinogenes]
Length = 238
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 60/92 (65%), Gaps = 3/92 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+ EKR+ Y FQ+K+ L++AL+H +Y + + +RLEFLGDA++D ++ +L+ F
Sbjct: 6 EFEKRLGYRFQNKNLLIEALTHKSY---KKPYNNERLEFLGDAVLDLVIGEFLFLKFPKA 62
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
GE+S +R+++VN FA A R+ L +H+
Sbjct: 63 DEGELSKMRASLVNEKGFAKLAERVSLGRHIF 94
>gi|70981901|ref|XP_746479.1| RNA helicase/RNAse III [Aspergillus fumigatus Af293]
gi|66844102|gb|EAL84441.1| RNA helicase/RNAse III, putative [Aspergillus fumigatus Af293]
Length = 1384
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 84/149 (56%), Gaps = 12/149 (8%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPE 99
++ KV+ADVVE+L G G A ++ LP+ I++H +V PE
Sbjct: 1033 QMSTKVLADVVEALIGAAYVDGGHSTAQACIR--RFLPE--INLHAVDTRTAARSV-APE 1087
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAII 159
AR + R L+ I YTF+D+S L++AL+HP+ + + T SYQRLE+LGDA++
Sbjct: 1088 SARHMMNDR-------LKDHIGYTFEDESLLVEALTHPSCDYDSTTQSYQRLEYLGDAVL 1140
Query: 160 DFLVTAYLYENFSHLSPGEISDIRSAMVN 188
D ++ + ++ + G+++ I+ A+VN
Sbjct: 1141 DMVIVSAIFNHRIQRPQGDMTKIKHAVVN 1169
Score = 43.9 bits (102), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 47/84 (55%), Gaps = 3/84 (3%)
Query: 123 TFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDI 182
+F+ ++ A+S P A+R+T +YQR EFLGD+I+ F V+ L+ + G +S+
Sbjct: 927 SFKSTDHIITAISTPL--AHRLT-NYQRYEFLGDSILKFSVSCQLFFQHPNWHEGYLSEG 983
Query: 183 RSAMVNNVTFASYAVRLDLHKHLL 206
R +V N A A+ L +++
Sbjct: 984 RDMIVQNPRLAKAALDTGLDAYIV 1007
>gi|158706446|sp|Q4WA22.2|DCL2_ASPFU RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
Length = 1388
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/149 (33%), Positives = 84/149 (56%), Gaps = 12/149 (8%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPE 99
++ KV+ADVVE+L G G A ++ LP+ I++H +V PE
Sbjct: 1037 QMSTKVLADVVEALIGAAYVDGGHSTAQACIR--RFLPE--INLHAVDTRTAARSV-APE 1091
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAII 159
AR + R L+ I YTF+D+S L++AL+HP+ + + T SYQRLE+LGDA++
Sbjct: 1092 SARHMMNDR-------LKDHIGYTFEDESLLVEALTHPSCDYDSTTQSYQRLEYLGDAVL 1144
Query: 160 DFLVTAYLYENFSHLSPGEISDIRSAMVN 188
D ++ + ++ + G+++ I+ A+VN
Sbjct: 1145 DMVIVSAIFNHRIQRPQGDMTKIKHAVVN 1173
Score = 44.3 bits (103), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 59/120 (49%), Gaps = 11/120 (9%)
Query: 121 NYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEIS 180
+ +F+ ++ A+S P A+R+T +YQR EFLGD+I+ F V+ L+ + G +S
Sbjct: 929 DVSFKSTDHIITAISTPL--AHRLT-NYQRYEFLGDSILKFSVSCQLFFQHPNWHEGYLS 985
Query: 181 DIRSAMVNNVTFASYAVRLDLHKHLL--------HDSPRLYENVTRFAQNQEARNHEISD 232
+ R +V N A A+ L +++ +P + E + R ++ ++D
Sbjct: 986 EGRDMIVQNPRLAKAALDTGLDAYIVTKRLASRKWSAPLISEKLGRVPAKRQMSTKVLAD 1045
>gi|356552945|ref|XP_003544820.1| PREDICTED: ribonuclease 3-like protein 2-like [Glycine max]
Length = 345
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
++E + Y F++K L +AL+H ++ SY+RLEF+GD ++ ++ YL+ + L
Sbjct: 8 EVENILRYRFRNKKLLEEALTHSSFLDG---VSYERLEFVGDPVLSLAISNYLFLAYPDL 64
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
PG++S +R+A V+ A AVR+ LH+ + H +P L + V RF
Sbjct: 65 DPGQLSALRAANVSTEKLARVAVRIGLHRFVRHSAPPLVDKVERF 109
>gi|426200573|gb|EKV50497.1| hypothetical protein AGABI2DRAFT_64825 [Agaricus bisporus var.
bisporus H97]
Length = 1717
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 85/165 (51%), Gaps = 18/165 (10%)
Query: 48 DVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPE-QARGLDP 106
D VE+L G + GI A+ ++ + + G P RC +AR +
Sbjct: 1079 DCVEALLGASFLAGGIPMAL----------RTGVCFGLSFGGIQPWGERCRRAEAREIG- 1127
Query: 107 LRYIPE-CTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTA 165
+P LEK I Y F++ L++A++HP+ + T SYQRLEFLGD++I LVT
Sbjct: 1128 ---VPALVAGLEKEIGYVFENPELLVEAVTHPSLEFSS-TPSYQRLEFLGDSVIKMLVTE 1183
Query: 166 YLYENFSHLSPGEISDIRSAMVNNVTFASYAVR-LDLHKHLLHDS 209
YLY F + +++ R+ + + A A+R L +HK+LL +S
Sbjct: 1184 YLYHKFPKATSHQLALPRTKAICSPALAHIAIRKLHIHKYLLQNS 1228
Score = 46.6 bits (109), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 3/86 (3%)
Query: 120 INYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEI 179
I F L++AL+ P +A+ S QRLE LGDA++D T +L + G++
Sbjct: 957 IGLPFIPDDLLMEALTLPNVDAD---FSNQRLETLGDAVLDICTTVHLMFKYPRRHEGQL 1013
Query: 180 SDIRSAMVNNVTFASYAVRLDLHKHL 205
S +R+ V+N S A ++L + +
Sbjct: 1014 STLRAGRVSNKFLVSCARTVELERFI 1039
>gi|168046558|ref|XP_001775740.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672892|gb|EDQ59423.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 792
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/197 (31%), Positives = 99/197 (50%), Gaps = 31/197 (15%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGA---MLFLQALNILPQSKI------DVHEALYGPH 91
+G K +ADVVE+L GV + A M++LQ P+ KI D+ E +
Sbjct: 475 IGLKTLADVVEALIGVTFLHGDLNSAVKTMVWLQVPIPFPE-KIPEVIIADIQELM---- 529
Query: 92 PSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHP---TYNAN---RIT 145
+AR I LEK+I Y F+ KS LL A + T+ + R +
Sbjct: 530 --------EARNTFKDHDI---VTLEKKIGYQFKCKSLLLSAFDYGDEVTFTQSGVPRGS 578
Query: 146 TSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
+QRLEFLGD+++DFL+ + + +S +P +++D+R A VN+ FA A+R H +L
Sbjct: 579 FQFQRLEFLGDSVLDFLIMRHFVQLYSAFNPEQLNDLRQATVNSENFACTAIRHGFHHYL 638
Query: 206 LHDSPRLYENVTRFAQN 222
SP L + + +A +
Sbjct: 639 KRMSPILRDEIELYAAS 655
>gi|403171531|ref|XP_003330752.2| hypothetical protein PGTG_12289 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375169221|gb|EFP86333.2| hypothetical protein PGTG_12289 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1403
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 110/206 (53%), Gaps = 29/206 (14%)
Query: 16 TEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI 75
TE+GK++++ NF +I +V++DVVE+L G L + GIE + AL++
Sbjct: 1027 TEEGKELANG--------NFSRKIP--RRVLSDVVEALLGAGLLTGGIELGLKVGTALDL 1076
Query: 76 LPQSKIDVHEALYGPHPSAVRCPEQARG------LDPLRYIPECTQLEKRINYTFQDKSF 129
G P + R + G LDP + C Q+E++INY F++K F
Sbjct: 1077 ----------CFGGISPWSQRTLTISFGKDAHDKLDPSMLL-TCEQIERKINYVFKEKLF 1125
Query: 130 LLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
L+QAL+H + N+ +T Y+R E+LGDA+ID + + Y+ F + + E+S R+ + N
Sbjct: 1126 LVQALTHRSANSF-LTNCYEREEWLGDAVIDMWIVEHAYKRFDNATADELSLARAKVACN 1184
Query: 190 VTFASYAV-RLDLHKHLLHDSPRLYE 214
+ A+ +L LH+ ++H S ++
Sbjct: 1185 GSLGFLAIKKLGLHEFIMHKSDNFHQ 1210
Score = 38.9 bits (89), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 58/130 (44%), Gaps = 19/130 (14%)
Query: 109 YIPECTQLE----------KRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAI 158
Y+P T+L KR+++ + AL+ P + YQ LE +GDA
Sbjct: 909 YLPSLTRLLHDALQAKFLFKRLDFPAISLPHGIHALTPPGVG---VPWDYQTLETVGDAF 965
Query: 159 IDFLVTAYLYENFSHLSPGE--ISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENV 216
+ + ++Y SHL GE +S +R+ ++N AV+ +L +L S R
Sbjct: 966 LKLATSVHVY--ISHLRKGEGDMSHVRARSIDNAYLRRKAVQANLPGSIL--SQRFRTGK 1021
Query: 217 TRFAQNQEAR 226
R AQ +E +
Sbjct: 1022 FRDAQTEEGK 1031
>gi|350646449|emb|CCD58848.1| ribonuclease III, putative [Schistosoma mansoni]
Length = 928
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 91/184 (49%), Gaps = 21/184 (11%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQS----KIDVHEALYGP----- 90
+L DK +AD+VE+L G +L G+ A L I P S K D H + P
Sbjct: 637 RLTDKSLADMVEALIGCFLLRSGLSAAFNLLHYFQICPVSWSTLKNDKHYKVEAPWHFFL 696
Query: 91 HP---SAVRCPE----QARGLDPLRYI-----PECTQLEKRINYTFQDKSFLLQALSHPT 138
P S + C R L + I QL++++ Y F+ L +A++H +
Sbjct: 697 QPKLYSELNCGNALNASCRSLHISKEIILELNQRFFQLQEKLGYYFKGIELLAEAMTHQS 756
Query: 139 YNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVR 198
+ +YQRLEFLGD+I+ +++ YL++ + SPG ++ RS +V+N+ A+ V
Sbjct: 757 SINKQYWGNYQRLEFLGDSILGHIISNYLFQKCPNSSPGALTTARSTVVSNINLANVVVE 816
Query: 199 LDLH 202
D++
Sbjct: 817 HDIY 820
>gi|296809942|ref|XP_002845309.1| dicer-like protein 1 [Arthroderma otae CBS 113480]
gi|238842697|gb|EEQ32359.1| dicer-like protein 1 [Arthroderma otae CBS 113480]
Length = 1521
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 94/210 (44%), Gaps = 5/210 (2%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKIDVHEA-LYGPHPSAVRCP 98
L DK +ADV E+L G L + G + + +A+ I S D H + + +
Sbjct: 1165 LADKSIADVCEALIGASLLAGGPDHKFDMATKAVTIFVNS--DDHRVERWADYSTLYSLT 1222
Query: 99 EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITT-SYQRLEFLGDA 157
Q+E+++ Y F+ L A HP+Y + YQRLEFLGD+
Sbjct: 1223 TYQTAAATASEADVANQIEEKLGYRFKYPKLLRSAFMHPSYPSQWANVPCYQRLEFLGDS 1282
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
++D +L+ + P +++ + AMV+N S AV L+LH HL+H S L +T
Sbjct: 1283 LLDMACVNHLFTKYPDKDPQWLTEHKMAMVSNKFLGSLAVGLNLHVHLIHISNVLQGQIT 1342
Query: 218 RFAQNQEARNHEISDEEEEEEEEEGIVRCL 247
+ + +A E+ E +CL
Sbjct: 1343 CYTEELQAMKMEMGGNLEAWTYTNEPPKCL 1372
>gi|189184858|ref|YP_001938643.1| ribonuclease III [Orientia tsutsugamushi str. Ikeda]
gi|189181629|dbj|BAG41409.1| ribonuclease III [Orientia tsutsugamushi str. Ikeda]
Length = 246
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 60/91 (65%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
L+ I Y F L++AL+HP+ N T +YQRLEFLGD I++ +++ L++NFSH +
Sbjct: 22 LQSEIGYNFNSIDLLIEALTHPSINQYGYTKNYQRLEFLGDVILNLVISETLFKNFSHYN 81
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G+++ R+ +V N + A +++LHK+++
Sbjct: 82 EGKLAKSRAFLVCNESICLIAQKINLHKYII 112
>gi|392596196|gb|EIW85519.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 1520
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 68/123 (55%), Gaps = 2/123 (1%)
Query: 97 CPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGD 156
C R DP P +L+ + Y F L++A +HP++ A SYQRLEFLGD
Sbjct: 1168 CARYGRVPDPSPAPPLFEELQSGLGYEFHRGDLLVEAATHPSF-ATSAGASYQRLEFLGD 1226
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAV-RLDLHKHLLHDSPRLYEN 215
A++D +V YL+ + + G++S RS V T AS AV RL+LH+ LL ++ L
Sbjct: 1227 ALLDVVVMRYLFHKYPRATSGQLSVARSRAVCGPTLASVAVKRLNLHQILLINNVELSIA 1286
Query: 216 VTR 218
++R
Sbjct: 1287 ISR 1289
Score = 41.6 bits (96), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 129 FLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
L++A S PT T + QR E LGD+++ VT ++ + H G++S +R + V+
Sbjct: 1005 LLIEAASLPT---TLHTWNNQRFETLGDSVLKLGVTVHIMNKYPHRHEGQLSKLRQSSVS 1061
Query: 189 NVTFASYAVRLDL 201
N T + A + L
Sbjct: 1062 NRTLLARAKEIGL 1074
>gi|148284924|ref|YP_001249014.1| ribonuclease III [Orientia tsutsugamushi str. Boryong]
gi|146740363|emb|CAM80798.1| ribonuclease III [Orientia tsutsugamushi str. Boryong]
Length = 251
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 60/91 (65%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
L+ I Y F L++AL+HP+ N T +YQRLEFLGD I++ +++ L++NFSH +
Sbjct: 27 LQSEIGYNFNSIDLLIEALTHPSINQYGYTKNYQRLEFLGDVILNLVISETLFKNFSHYN 86
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G+++ R+ +V N + A +++LHK+++
Sbjct: 87 EGKLAKSRAFLVCNESICLIAQKINLHKYII 117
>gi|312135000|ref|YP_004002338.1| ribonuclease iii [Caldicellulosiruptor owensensis OL]
gi|311775051|gb|ADQ04538.1| ribonuclease III [Caldicellulosiruptor owensensis OL]
Length = 222
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 68/115 (59%), Gaps = 5/115 (4%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
++EK + Y F+DK+ L AL+H + + Y+RLEFLGDA ++ V+ YLY F L
Sbjct: 3 EIEKALGYKFEDKNLLRLALTHKSATHSN-KNCYERLEFLGDAALELAVSKYLYVYFPEL 61
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS----PRLYENVTRFAQNQEA 225
S GE+++IR+A+V + T + A +L+L H++ + YEN + A EA
Sbjct: 62 SEGELTNIRAAVVCSQTLSKVAEKLNLKNHIIFGKREKMEKFYENKSILADVLEA 116
>gi|154148336|ref|YP_001407136.1| ribonuclease III [Campylobacter hominis ATCC BAA-381]
gi|153804345|gb|ABS51352.1| ribonuclease III [Campylobacter hominis ATCC BAA-381]
Length = 223
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
++EK + Y F++++ L AL+H ++ + +RLEFLGDA++D +V YLYE F H
Sbjct: 3 EIEKILGYKFKNENHLKLALTHKSFKG---AQNNERLEFLGDAVMDLIVAEYLYEKFRHT 59
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G++S +R+A+VN +FA +A +L + ++L
Sbjct: 60 QEGDLSKLRAALVNEKSFAKFARKLKIGENLF 91
>gi|340514590|gb|EGR44851.1| predicted protein [Trichoderma reesei QM6a]
Length = 1416
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/250 (26%), Positives = 106/250 (42%), Gaps = 34/250 (13%)
Query: 41 LGDKVVADVVESLTGV-YLRSC------GIEGAMLFLQALNILPQSKIDVHEALYGPHPS 93
L K +ADV E+L G Y+ S ++ + ++N S D P
Sbjct: 1054 LSHKSIADVCEALIGAAYMSSSPGDMDMAVKAVAAMVCSINHTMTSYKDYFATFTAPKWY 1113
Query: 94 AVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEF 153
+ +QA L ++ + Y F+ A HP+Y YQRLEF
Sbjct: 1114 S----QQATAAQRL----TVDKVAEITGYRFKAAPLARSAFRHPSYVFENNIRDYQRLEF 1165
Query: 154 LGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLY 213
LGD ++D + +L++ F P +++ ++AMV+N V+L LHKH+L + L
Sbjct: 1166 LGDGLLDMAIVDFLFKRFPEADPKWLTEHKTAMVSNQFLGCLCVKLGLHKHILLATSSLL 1225
Query: 214 ENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPK 273
++ R+A + E+ EE +R E + + + + V+ PK
Sbjct: 1226 GDIGRYA----------AQLEQAEETARQTLRA------EAESIPQNFW---VDVPQPPK 1266
Query: 274 ALGDVFEALV 283
L DV EALV
Sbjct: 1267 VLADVVEALV 1276
>gi|354558634|ref|ZP_08977888.1| Ribonuclease 3 [Desulfitobacterium metallireducens DSM 15288]
gi|353545696|gb|EHC15146.1| Ribonuclease 3 [Desulfitobacterium metallireducens DSM 15288]
Length = 263
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 63/105 (60%), Gaps = 5/105 (4%)
Query: 106 PLRYIPECTQLEKRINYT-FQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDF 161
P+R P QL KR+ F ++ F + AL+HP+Y N + QRLEFLGDAI+DF
Sbjct: 28 PMRKNPIGLQLAKRLELNPFPNRLFKI-ALTHPSYLFENPKSGVENNQRLEFLGDAILDF 86
Query: 162 LVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
++ YLY + GE++ +R+A+VN T A A +++L K LL
Sbjct: 87 VIAEYLYLKYPERPEGELTKMRAAVVNESTLARIAQKIELGKELL 131
>gi|344995859|ref|YP_004798202.1| ribonuclease 3 [Caldicellulosiruptor lactoaceticus 6A]
gi|343964078|gb|AEM73225.1| Ribonuclease 3 [Caldicellulosiruptor lactoaceticus 6A]
Length = 222
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 69/109 (63%), Gaps = 4/109 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
++E+ + YTF+DK+ L AL+H + + Y+RLEFLGDA ++ V+ YL+ +F L
Sbjct: 3 EIERALGYTFKDKNLLRLALTHKSATHSN-KNCYERLEFLGDAALELAVSKYLFVHFPEL 61
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQ 223
S GE+++IR+A+V + T + A +L+L H++ E + +F +N+
Sbjct: 62 SEGELTNIRAAVVCSQTLSKVAEKLNLKNHIIFGKR---EKMEKFHENK 107
>gi|171690380|ref|XP_001910115.1| hypothetical protein [Podospora anserina S mat+]
gi|170945138|emb|CAP71249.1| unnamed protein product [Podospora anserina S mat+]
Length = 1568
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 7/183 (3%)
Query: 41 LGDKVVADVVESLTGV-YLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPE 99
L DK +ADV E++ G YL + + +QA+ + K + + + + + P
Sbjct: 1185 LADKSIADVCEAIIGAAYLTAQEAGNFDMAIQAVTRMVNDKNHTMQT-WSDYYAVYKKP- 1242
Query: 100 QARGLDPLRYIPE--CTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLGD 156
A P + E + KR+ Y FQ L A HPTY + SYQRLEFLGD
Sbjct: 1243 -AWQTMPTNSVQEDMAEKFHKRMGYRFQYPRLLRSAFQHPTYPTSWEKLPSYQRLEFLGD 1301
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENV 216
A++D +L+ F P +++ + AMV+N AV + H+ L H SP + +
Sbjct: 1302 ALLDMACIDHLFHRFPGADPQWLTEHKMAMVSNQFLGCLAVYIGFHRSLQHSSPAVQSEI 1361
Query: 217 TRF 219
+
Sbjct: 1362 ASY 1364
>gi|221361577|emb|CAX18337.1| dicel-like 2 [Nicotiana benthamiana]
Length = 224
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 59/163 (36%), Positives = 83/163 (50%), Gaps = 19/163 (11%)
Query: 3 FLSNLDFDL--YQDPTEDGKKVSSPEK--LPSSSYNFLDRIKLGDKVVADVVESLTGVYL 58
F+ N FDL + P ++ + + E+ +PS R K K VADVVE+L G +L
Sbjct: 77 FIRNEPFDLKGWLIPGDNSQVYNFDEEVLMPSVKMYSRGRQKTKSKRVADVVEALIGAFL 136
Query: 59 RSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEK 118
S G A+ F++ L I ID +A PS P A L +RY LE
Sbjct: 137 SSGGEVAALSFMKWLGI----DIDFVDA-----PSPRHFPMNAEKLVNVRY------LES 181
Query: 119 RINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDF 161
++Y F D S L++AL+H +Y I YQRLEFLGD ++D+
Sbjct: 182 LLHYKFHDPSLLVEALTHGSYMLPEIPRCYQRLEFLGDVVLDY 224
>gi|357118476|ref|XP_003560980.1| PREDICTED: ribonuclease 3-like protein 2-like [Brachypodium
distachyon]
Length = 360
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 87/188 (46%), Gaps = 34/188 (18%)
Query: 100 QARGLDPLRYIPE----CTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLG 155
+ RG P ++ + ++E+ + Y F D++ L AL+H +++ SYQRLEFLG
Sbjct: 6 RKRGPPPPGFVEDRSEAAARVERLLQYRFHDRALLELALTHQSFSGG--AASYQRLEFLG 63
Query: 156 DAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYEN 215
DA +D + +LY L PGE++ +R+A ++ A AVR DL+ L P L
Sbjct: 64 DAALDLAFSDFLYRANPTLGPGELTTLRAANISTEKLARVAVRHDLYPLLRRACPPLDLL 123
Query: 216 VTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKAL 275
V +F E+ +E E+ D T YG V V PK L
Sbjct: 124 VGQFI--------ELVKQELED------------------DFSTAPYGGCV--VKAPKVL 155
Query: 276 GDVFEALV 283
D+ EA+
Sbjct: 156 ADIVEAIA 163
>gi|395331143|gb|EJF63525.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 1526
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 80/155 (51%), Gaps = 14/155 (9%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L K++ADVVESL G G + A+ + A N L S + E + H
Sbjct: 1149 LSTKMLADVVESLIGAAYEDGGFDRAIDCVTAFN-LGLSWKKLPEYIGAMH--------- 1198
Query: 101 ARGLDPLRYIPECTQL-EKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAII 159
+D + IPE L E+ INY F ++FL+QAL+H +Y + T S +RLEFLGDA +
Sbjct: 1199 --AVDDIDDIPEQLALVEQMINYRFARRTFLVQALTHASYQGDFATMSLERLEFLGDAAL 1256
Query: 160 DFLVTAYLYE-NFSHLSPGEISDIRSAMVNNVTFA 193
D +V YLY SPG + + A+VN+ A
Sbjct: 1257 DMIVVDYLYHAEGKDYSPGYMHIKKMAVVNSHILA 1291
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 2/69 (2%)
Query: 148 YQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLH 207
YQRLE LGD ++ F+ + LY +F G +S + V NV A +AV+ L++ ++
Sbjct: 1035 YQRLETLGDTVLKFITSNLLYADFPLWHEGYLSRKKDHAVANVNLARWAVKKGLYRWIIR 1094
Query: 208 DS--PRLYE 214
D PR ++
Sbjct: 1095 DRFIPRKWK 1103
>gi|449459642|ref|XP_004147555.1| PREDICTED: ribonuclease 3-like protein 2-like [Cucumis sativus]
Length = 338
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 63/104 (60%), Gaps = 3/104 (2%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE+ ++Y F +KS L +AL+HP+Y+A + SY+RLEF+GD+ I VT Y + HL
Sbjct: 8 LERILSYNFNNKSLLEEALTHPSYSA---SASYERLEFVGDSAIGLAVTNYFFLASPHLH 64
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
G +S +R+A V+ A AV L+ ++ DSP + + V F
Sbjct: 65 QGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDDKVKEF 108
>gi|313212467|emb|CBY36441.1| unnamed protein product [Oikopleura dioica]
Length = 2196
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 121/262 (46%), Gaps = 33/262 (12%)
Query: 32 SYNFLD-RIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID-----VHE 85
+Y F D + K DK ADVVESL G YL + G + A F+ LN L + +D + E
Sbjct: 1819 NYMFFDSKDKRVDKKTADVVESLIGAYLVTGGEKMAARFVIMLNNLYKMTVDSSPEFLEE 1878
Query: 86 ALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRIT 145
L P P R +L+ + YTF+ AL+ Y +
Sbjct: 1879 DLVEPDP---------------RTQSIIDELQNELEYTFKTPHLCRLALAKKKYTKDP-K 1922
Query: 146 TSYQRLEFLGDAIIDFLVTAYLYENFS-HLSPGEISDIRSAMVNNVTFASYAVRLDLHKH 204
+++RLEFLGDA++D+LV LY S L G+++D++ ++ +N F S A + L +
Sbjct: 1923 DNFERLEFLGDAVLDYLVVDELYNRRSAALDSGQLTDLKQSITSNNLFGSLAFCMGLPQS 1982
Query: 205 LLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGR 264
L + ++++ + ++ +N ++ + + R L E+ + R
Sbjct: 1983 TLMKASAAKDHISCMYKLEQFKNL-LNKPKHGVPLNPDLKRVL-----EKANWNNKTSNR 2036
Query: 265 VVEY----VDVPKALGDVFEAL 282
Y +D+PK GDVFE++
Sbjct: 2037 AGPYSSYLLDIPKWFGDVFESM 2058
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S LL+AL+ PT N + +RLEF GD+ I T LYE ++H S GE++ R A +
Sbjct: 1672 SLLLRALTQPTAND---FFNLERLEFFGDSFIKIACTRMLYEKYAHFSDGELTSARGAYI 1728
Query: 188 NNVTF 192
+N F
Sbjct: 1729 SNANF 1733
>gi|302872013|ref|YP_003840649.1| ribonuclease III [Caldicellulosiruptor obsidiansis OB47]
gi|302574872|gb|ADL42663.1| ribonuclease III [Caldicellulosiruptor obsidiansis OB47]
Length = 222
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 67/109 (61%), Gaps = 4/109 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
++EK + Y F+DK+ L AL+H + + Y+RLEFLGDA ++ V+ YLY F L
Sbjct: 3 EIEKALGYKFEDKNLLKLALTHKSATHSN-KNCYERLEFLGDAALELAVSKYLYVYFPEL 61
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQ 223
S GE+++IR+A+V + T + A +L+L H++ E + +F +N+
Sbjct: 62 SEGELTNIRAAVVCSQTLSKVAEKLNLKNHIIFGKR---EKMEKFHENK 107
>gi|291000766|ref|XP_002682950.1| hypothetical protein NAEGRDRAFT_62031 [Naegleria gruberi]
gi|284096578|gb|EFC50206.1| hypothetical protein NAEGRDRAFT_62031 [Naegleria gruberi]
Length = 1386
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 93/179 (51%), Gaps = 16/179 (8%)
Query: 44 KVVADVVESLTGV--YLRSCGIEGAMLFLQALNI-LPQSKIDVHEALYGPHPSAVRCPEQ 100
KV+ADVVES+ G ++ +E FL + + LP+ +I E ++ +R +
Sbjct: 1041 KVLADVVESIIGFCYHIFGGSLEQINRFLGLVGVSLPKGEISGSEDIFMNQKLLLRNHFE 1100
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
+D + L +++N+ F++ LL+A HP+YN +Y+RLEFLGD+++
Sbjct: 1101 KLKIDLYK-------LTEKLNFQFENSGLLLEAFIHPSYNG---VFNYERLEFLGDSVLG 1150
Query: 161 FLVTAYLYENF---SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENV 216
+VT+ ++E F S S G +S +R +V N FA+ + L +++ + + V
Sbjct: 1151 LIVTSKIFEKFHKNSSFSLGMMSKLREKIVMNKNFANLCIENQLQNYIIFSGNHIAQQV 1209
Score = 47.4 bits (111), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 52/99 (52%), Gaps = 3/99 (3%)
Query: 138 TYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAV 197
T +++ +Y++LEF GD+I+ ++V+ ++Y F S G +S ++ V+N AS A
Sbjct: 941 TAKRSQVGANYEKLEFFGDSILKYIVSKHIYHEFPLYSSGSLSQLQHKFVSNYFLASVAR 1000
Query: 198 RLDLHKHLLH---DSPRLYENVTRFAQNQEARNHEISDE 233
L ++ ++ +L +N+ F N+ A I E
Sbjct: 1001 NTRLPLFIITEPLNTSQLVQNIGGFKSNKFADETNIEAE 1039
>gi|431794580|ref|YP_007221485.1| ribonuclease III [Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430784806|gb|AGA70089.1| ribonuclease III [Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 262
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 59/105 (56%), Gaps = 3/105 (2%)
Query: 105 DPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDF 161
D ++ IP L KR+ L AL+HP+Y N + QRLEFLGDAI+DF
Sbjct: 27 DSVKRIPTGVDLAKRLELDTPPNRLLTTALTHPSYLFENPQSGLDNNQRLEFLGDAILDF 86
Query: 162 LVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+V YLY ++ GE++ +R+A+VN T A A ++ L K LL
Sbjct: 87 VVAEYLYLSYPERPEGELTKMRAAVVNESTLARTAKKIQLGKELL 131
>gi|302687578|ref|XP_003033469.1| hypothetical protein SCHCODRAFT_37756 [Schizophyllum commune H4-8]
gi|300107163|gb|EFI98566.1| hypothetical protein SCHCODRAFT_37756, partial [Schizophyllum commune
H4-8]
Length = 1343
Score = 77.0 bits (188), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 81/163 (49%), Gaps = 12/163 (7%)
Query: 45 VVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARGL 104
V+ADV+ESL G G+ Q ++ L SA +R +
Sbjct: 1069 VLADVIESLIGAAYVHGGLSLGRACAQFFDL----------GLKWDTTSARISTILSRTV 1118
Query: 105 DPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVT 164
+Y E +E+ + YTF+ K+ L++AL+H +Y T SY RLEFLGDA++D VT
Sbjct: 1119 TLDQYPAELQYVERMLGYTFERKALLIEALTHASYQEPLPTPSYGRLEFLGDAVLDMAVT 1178
Query: 165 AYLYENFSHLSPGEISDIRSAMVNN--VTFASYAVRLDLHKHL 205
Y++ + + SPG I RSA VN + F ++ + KH+
Sbjct: 1179 PYIFASKKNYSPGHIHLRRSAAVNMHFLAFVCLRAKVAVDKHM 1221
Score = 39.7 bits (91), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 35/62 (56%)
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+YQRLE +GD ++ +LV+ LY + G ++ + V+NV A +VR + + ++
Sbjct: 973 NYQRLETMGDTVLKYLVSIQLYAEYPLWHEGYLAKQKDHTVSNVRLAKISVRRHIFQWII 1032
Query: 207 HD 208
+
Sbjct: 1033 RE 1034
>gi|402079303|gb|EJT74568.1| dicer-like protein 1 [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 1607
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 86/168 (51%), Gaps = 3/168 (1%)
Query: 41 LGDKVVADVVESLTGV-YLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPE 99
LGDK +ADV E+L G YL + ++A+ +L +S+ ++ + + +A PE
Sbjct: 1231 LGDKSIADVCEALIGAAYLTGRERNSFDMAVKAVTLLTRSQTHTMKS-FAEYRAAYVKPE 1289
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLGDAI 158
+ ++++++ Y F+D L A HP+Y SYQRLEFLGDA+
Sbjct: 1290 WQTVPASRLQLELARRIKEKMGYEFKDARLLRSAFMHPSYPRVYENIPSYQRLEFLGDAL 1349
Query: 159 IDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+D +L+ F P +++ + AMV+N + AV L H+H++
Sbjct: 1350 LDMTCIDHLFGRFPDRDPQWLTEHKMAMVSNQFYGCLAVELGFHRHVV 1397
>gi|451850832|gb|EMD64133.1| hypothetical protein COCSADRAFT_142297 [Cochliobolus sativus ND90Pr]
Length = 1435
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 84/160 (52%), Gaps = 24/160 (15%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQALNIL------PQSKIDVHEALYGPHPSAVRC 97
K++ADV+ESL G G A ++AL L PQ+ ++ LY P
Sbjct: 1059 KLIADVIESLIGASYVVGGFSKAFACVKALLPLEDWMPIPQA----NDTLYNAAPEQ--- 1111
Query: 98 PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
+ G+ P+ E + + F +K+ LL+AL+HPT+ SY+R EFLGDA
Sbjct: 1112 -DSVMGVIPV---------ENLVGHIFNNKAMLLEALTHPTFRGLNTHCSYEREEFLGDA 1161
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAV 197
++D++V+ LY + L ++ IR+AMV N +F +Y++
Sbjct: 1162 VLDYIVSKRLYSHRPELPHHKMHGIRTAMV-NASFLAYSM 1200
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+YQRLEFLGD I+ F+ + +L + G ++ +S +V+N A A+ L + +L
Sbjct: 968 NYQRLEFLGDCILKFITSLHLMATHLRMPEGMLTGKKSKLVSNGYLARAALAKGLDEFIL 1027
Query: 207 H 207
+
Sbjct: 1028 Y 1028
>gi|374854311|dbj|BAL57196.1| ribonuclease III [uncultured prokaryote]
Length = 239
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 64/104 (61%), Gaps = 9/104 (8%)
Query: 104 LDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY--NANRITTSYQRLEFLGDAIIDF 161
+DPL + ++ TF+D S LL+AL+H +Y +T +RLEFLGDA++DF
Sbjct: 8 IDPLDW-------SHQVGLTFRDWSLLLRALTHRSYCNEHPEVTEDNERLEFLGDAVLDF 60
Query: 162 LVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
+V ++Y ++ L GE++ +RSA+V N AS+A ++DL L
Sbjct: 61 IVGEWVYHHYPELREGELTRLRSALVRNEQLASFARQIDLGAAL 104
>gi|451996502|gb|EMD88969.1| hypothetical protein COCHEDRAFT_1143131 [Cochliobolus heterostrophus
C5]
Length = 1426
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 84/158 (53%), Gaps = 20/158 (12%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQAL----NILPQSKIDVHEALYGPHPSAVRCPE 99
K++ADV+ESL G G A ++AL N +P + + + LY PE
Sbjct: 1062 KLIADVIESLIGASYVVGGFSKAFACVKALLPLENWMPIPQAN--DTLYNA------APE 1113
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAII 159
Q + + +E + + F +K+ LL+AL+HPT+ SY+R EFLGDA++
Sbjct: 1114 QDSVVGAI-------TVENLVGHAFNNKALLLEALTHPTFRGLNTFCSYEREEFLGDAVL 1166
Query: 160 DFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAV 197
D++V+ LY + L ++ IR+AMV N +F +Y++
Sbjct: 1167 DYIVSKRLYSHRPELPHYKMHGIRTAMV-NASFLAYSM 1203
Score = 38.1 bits (87), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 33/61 (54%)
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+YQRLEFLGD I+ F+ + +L + G ++ + +V+N A A+ L +L
Sbjct: 971 NYQRLEFLGDCILKFITSLHLMATHLRMPEGMLTGKKGKLVSNGYLARAALAKGLDGFIL 1030
Query: 207 H 207
+
Sbjct: 1031 Y 1031
>gi|116205049|ref|XP_001228335.1| hypothetical protein CHGG_10408 [Chaetomium globosum CBS 148.51]
gi|88176536|gb|EAQ84004.1| hypothetical protein CHGG_10408 [Chaetomium globosum CBS 148.51]
Length = 1227
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 80/158 (50%), Gaps = 26/158 (16%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAM----LFLQ--ALNILPQSKIDVHEALYGPHPS 93
++ K++ADVVE+L G S GI A+ LFL A N + + E +Y P
Sbjct: 1051 RISTKIIADVVEALIGTAFVSGGISKALACMSLFLPDVAWNSIEYGR----EVMYNEAPD 1106
Query: 94 AVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEF 153
P R QLE + YTF K+ L++A++HP+ N I S RLEF
Sbjct: 1107 DEPLPRTMR------------QLESLVGYTFTKKALLVEAMTHPSCNGPGIRASLDRLEF 1154
Query: 154 LGDAIIDFLVTAYLYENFSHLSPGEISD---IRSAMVN 188
LGDAI+D++V L+ S +P E S +R+A+VN
Sbjct: 1155 LGDAILDYVVVNKLFA-ISDPAPLENSSLHLLRTALVN 1191
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 116 LEKRINYT-FQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
LE R+ T D S ++ A+ T +A R T Y+R+EFLGD+I+ F T +
Sbjct: 934 LESRLEQTGITDLSLIVTAI---TASAARGPTDYERIEFLGDSILKFCTTINCSATYLKF 990
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYE 214
G +S ++ +V+N AV L ++++H + L++
Sbjct: 991 PEGCLSPLKDKIVSNSRLFRAAVDFGLDRYIIHKAFTLHK 1030
>gi|312622598|ref|YP_004024211.1| ribonuclease iii [Caldicellulosiruptor kronotskyensis 2002]
gi|312203065|gb|ADQ46392.1| ribonuclease III [Caldicellulosiruptor kronotskyensis 2002]
Length = 222
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
++EK + Y F+DK+ L AL+H + + Y+RLEFLGDA ++ V+ YL+ +F L
Sbjct: 3 EIEKALGYKFKDKNLLRLALTHKSATHSN-KNCYERLEFLGDAALELAVSKYLFVHFPEL 61
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQ 223
S GE+++IR+A+V + T + A +L+L H++ E + +F +N+
Sbjct: 62 SEGELTNIRAAVVCSQTLSKIAEKLNLKNHIIFGKR---EKMEKFHENK 107
>gi|222529151|ref|YP_002573033.1| ribonuclease III [Caldicellulosiruptor bescii DSM 6725]
gi|222455998|gb|ACM60260.1| ribonuclease III [Caldicellulosiruptor bescii DSM 6725]
Length = 222
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
++EK + Y F DK+ L AL+H + + Y+RLEFLGDA ++ +V+ YL+ +F L
Sbjct: 3 EIEKALGYKFMDKNLLRLALTHKSATHSN-KNCYERLEFLGDAALELVVSKYLFVHFPEL 61
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQ 223
S GE+++IR+A+V + T + A +L+L H++ E + +F +N+
Sbjct: 62 SEGELTNIRAAVVCSQTLSKIAEKLNLKNHIIFGKR---EKMEKFHENK 107
>gi|402225633|gb|EJU05694.1| hypothetical protein DACRYDRAFT_113750 [Dacryopinax sp. DJM-731 SS1]
Length = 1596
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 104/217 (47%), Gaps = 45/217 (20%)
Query: 21 KVSSPEKL--PSSSYNFLDRI------KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQA 72
KV P++ P +++ LD + + ++D VESL G G++G + A
Sbjct: 1057 KVCGPKRWMPPVTTHTTLDGVIPYVKQTSLRRCLSDCVESLLGAGYLCGGLDGLLRTGTA 1116
Query: 73 LNILPQSKIDVHEALYGPHPSAVRCPEQARGLDPL--RYI---PECTQ------LEKRIN 121
+ + +G G++P RY P C L+ +
Sbjct: 1117 IGLC-----------FG-------------GMEPWSHRYTGDSPSCGASTSLRLLQDTLG 1152
Query: 122 YTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISD 181
Y F++ LL+AL+HPT+ ++ T SYQRLEFLGDA++D + YL+ F + +++
Sbjct: 1153 YEFRNPLLLLEALTHPTFPDSQ-TPSYQRLEFLGDAVVDVFIVDYLFHKFPACTAHKLTW 1211
Query: 182 IRSAMVNNVTFASYAVR-LDLHKHLLHDSPRLYENVT 217
++ +V N + A+R L L+KH+L+ + RL +T
Sbjct: 1212 MKHLIVCNSLLGAVAIRELGLYKHMLYMARRLDLEIT 1248
Score = 40.4 bits (93), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 7/72 (9%)
Query: 137 PTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYA 196
P YN Y RLEFLGD + + +++ + H G++S ++ V N A
Sbjct: 992 PKYN-------YDRLEFLGDTFLKLATSIHIFNKYPHRHEGQLSVLKDGSVRNTYLRGKA 1044
Query: 197 VRLDLHKHLLHD 208
RL ++ + + D
Sbjct: 1045 YRLGIYHYNVTD 1056
>gi|313224452|emb|CBY20242.1| unnamed protein product [Oikopleura dioica]
Length = 2082
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/262 (27%), Positives = 120/262 (45%), Gaps = 33/262 (12%)
Query: 32 SYNFLD-RIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKID-----VHE 85
+Y F D + K DK ADVVESL G YL + G + A F+ LN L +D + E
Sbjct: 1807 NYMFFDSKDKRVDKKTADVVESLIGAYLVTGGEKMAARFVIMLNNLYTMTVDSSPEFLEE 1866
Query: 86 ALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRIT 145
L P P R +L+ + YTF+ AL+ Y +
Sbjct: 1867 DLVEPDP---------------RTQSIIDELQNELEYTFKTPHLCRLALAKKKYTKDP-K 1910
Query: 146 TSYQRLEFLGDAIIDFLVTAYLYENFS-HLSPGEISDIRSAMVNNVTFASYAVRLDLHKH 204
+++RLEFLGDA++D+LV LY S L G+++D++ ++ +N F S A + L +
Sbjct: 1911 DNFERLEFLGDAVLDYLVVDELYNRRSAALDSGQLTDLKQSITSNNLFGSLAFCMGLPQS 1970
Query: 205 LLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGR 264
L + ++++ + ++ +N ++ + + R L E+ + R
Sbjct: 1971 TLMKASAAKDHISCMYKLEQFKNL-LNKPKHGVPLNPDLKRVL-----EKANWNNKTSNR 2024
Query: 265 VVEY----VDVPKALGDVFEAL 282
Y +D+PK GDVFE++
Sbjct: 2025 AGPYSSYLLDIPKWFGDVFESM 2046
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 3/65 (4%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S LL+AL+ PT N + +RLEF GD+ I T LYE ++H S GE++ R A +
Sbjct: 1672 SLLLRALTQPTAND---FFNLERLEFFGDSFIKIACTRMLYEKYAHFSDGELTSARGAYI 1728
Query: 188 NNVTF 192
+N F
Sbjct: 1729 SNANF 1733
>gi|223041196|ref|ZP_03611448.1| ribonuclease III [Campylobacter rectus RM3267]
gi|222877555|gb|EEF12684.1| ribonuclease III [Campylobacter rectus RM3267]
Length = 222
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 63/104 (60%), Gaps = 4/104 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE+++ Y F+D+ L AL+H + + +RLEFLGDA++D ++ YL+ FS LS
Sbjct: 4 LEEKLGYKFKDEKLLKTALTHKSVKGG---ANNERLEFLGDAVMDLVIGDYLFHKFSRLS 60
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
G++S +R+A+VN +FA A L+L L++ SP N R
Sbjct: 61 EGDLSKLRAALVNEKSFAELAKYLNLG-QLINISPAEEHNGGRL 103
>gi|357462175|ref|XP_003601369.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355490417|gb|AES71620.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
Length = 565
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 66/112 (58%), Gaps = 1/112 (0%)
Query: 111 PECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYEN 170
P ++E + Y F++K L +A +H TY A SY+RLE++GD++++ ++T ++
Sbjct: 225 PPLHEVEAILEYEFKNKLLLEEAFTHGTYGAEN-GLSYERLEYVGDSVLNLMITKEQFQA 283
Query: 171 FSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQN 222
+ L+PG ++ +R+A V+ A A++ LH++L H P L + + F +
Sbjct: 284 YPTLAPGHLTRLRAANVDTEKLARVAIKHGLHRYLRHKKPLLGDQIQEFTKG 335
>gi|224064945|ref|XP_002301611.1| predicted protein [Populus trichocarpa]
gi|222843337|gb|EEE80884.1| predicted protein [Populus trichocarpa]
Length = 303
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 76/137 (55%), Gaps = 2/137 (1%)
Query: 85 EALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRI 144
E+ G S+ E A G ++ + ++E+ ++Y F+ K L +AL+H +++
Sbjct: 26 ESHKGTKESSDDRSEVASGKQTTDWVTDLDEVEEILHYKFKSKKLLEEALTHASFSDQ-- 83
Query: 145 TTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKH 204
SY+RLE++GD++++ L T Y + L PG ++ +RSA V+ A A++ LH++
Sbjct: 84 CFSYERLEYVGDSVLNLLFTKEQYFLYPDLPPGPLTRLRSANVDTEKLARVAIKHKLHRY 143
Query: 205 LLHDSPRLYENVTRFAQ 221
L H P L E + F+Q
Sbjct: 144 LRHKMPLLEEQIREFSQ 160
>gi|388857965|emb|CCF48410.1| related to cell cycle control protein dicer [Ustilago hordei]
Length = 1752
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 79/174 (45%), Gaps = 30/174 (17%)
Query: 111 PECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE- 169
P L+ ++T++ L++ +HP+ A+ I SYQRLEFLGDA IDF + + +Y
Sbjct: 1335 PSLRHLQSLFSHTYRYPHLALESFTHPSLLAS-ILPSYQRLEFLGDAWIDFFIVSRIYTE 1393
Query: 170 --NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARN 227
L PGE++ ++ + +N ++ V+L LHK + +S L E++ ++ + E
Sbjct: 1394 GGGLVVLDPGEMTALKGVLASNAALSALGVKLGLHKFIASNSAVLVESIAKYGKGLEK-- 1451
Query: 228 HEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEA 281
+ K Y V VPKA+ DV EA
Sbjct: 1452 ------------------------VLRKGGGEGQYWTKAGMVQVPKAVADVVEA 1481
Score = 41.2 bits (95), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 57/132 (43%), Gaps = 12/132 (9%)
Query: 126 DKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSA 185
D +L+AL+ P+ + Y+RLEFLGD + + T + + + E+
Sbjct: 1163 DNDKVLEALTSPSAGS---AFDYERLEFLGDTFLKLIATCHTFTTHLGRTEAELHMANKG 1219
Query: 186 MVNNVTFASYAVRLDLHKHLLHDS----PRLYE-----NVTRFAQNQEARNHEISDEEEE 236
+V NV A RL L K+ + S PR + NV N + +H+ + +
Sbjct: 1220 IVTNVRLLKEAKRLGLEKYAILPSCNLLPRRFTAPVICNVGGALTNDPSMDHDGQVDVVK 1279
Query: 237 EEEEEGIVRCLI 248
E+ IV LI
Sbjct: 1280 EKTLSDIVESLI 1291
>gi|424782431|ref|ZP_18209278.1| Ribonuclease III [Campylobacter showae CSUNSWCD]
gi|421959751|gb|EKU11359.1| Ribonuclease III [Campylobacter showae CSUNSWCD]
Length = 222
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 4/103 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE+++ Y F+D+ L AL+H + + +RLEFLGDA++D ++ YL+ FS LS
Sbjct: 4 LEEKLGYKFKDEKLLKTALTHKSVKGG---ANNERLEFLGDAVMDLVIGDYLFHKFSRLS 60
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTR 218
G++S +R+A+VN +FA A L+L L++ SP N R
Sbjct: 61 EGDLSKLRAALVNEKSFAELAKYLNLG-QLINISPAEEHNGGR 102
>gi|255321781|ref|ZP_05362936.1| ribonuclease III [Campylobacter showae RM3277]
gi|255301261|gb|EET80523.1| ribonuclease III [Campylobacter showae RM3277]
Length = 222
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 4/103 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE+++ Y F+D+ L AL+H + + +RLEFLGDA++D ++ YL+ FS LS
Sbjct: 4 LEEKLGYKFKDEKLLKTALTHKSVKGG---ANNERLEFLGDAVMDLVIGDYLFHKFSRLS 60
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTR 218
G++S +R+A+VN +FA A L+L L++ SP N R
Sbjct: 61 EGDLSKLRAALVNEKSFAELAKYLNLG-QLINISPAEEHNGGR 102
>gi|158706455|sp|Q2H0G2.2|DCL1_CHAGB RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease DCL1; Includes: RecName:
Full=ATP-dependent helicase DCL1
Length = 1607
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 106/257 (41%), Gaps = 29/257 (11%)
Query: 41 LGDKVVADVVESLTGV-YLRS---------CGIEGAMLFLQALNILPQSKIDVHEALYGP 90
L DK +ADV E+L G YL + I + ++ N S D + A Y P
Sbjct: 1198 LADKTIADVCEALIGAAYLTAQEQTPPNFDLAIRAVTVMVKDKNHTMTSYSDYYAA-YSP 1256
Query: 91 HPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQ 149
P+ P + LD + E R+ Y F L A HPTY + SYQ
Sbjct: 1257 -PAWQTAPCNSTQLD------MAARFEARMGYAFTHPRLLRSAFQHPTYPSVYEKLPSYQ 1309
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDA++D +L+ F P +++ + AMV+N AV L H+ + + +
Sbjct: 1310 RLEFLGDALLDMASVEFLFHRFPGADPQWLTEHKMAMVSNQFLGCLAVYLGFHRAISYCA 1369
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLI-EEKDVQTDVYGR--VV 266
+ + +T + EI D + ++ C D+ + + R V
Sbjct: 1370 SAIQKEITEYVT-------EIEDALQSARDDASKTPCNRHATTPSPGDLPAESFARDFWV 1422
Query: 267 EYVDVPKALGDVFEALV 283
PK L DV EA V
Sbjct: 1423 RCSRPPKCLPDVVEAYV 1439
>gi|115478498|ref|NP_001062844.1| Os09g0315100 [Oryza sativa Japonica Group]
gi|113631077|dbj|BAF24758.1| Os09g0315100, partial [Oryza sativa Japonica Group]
Length = 245
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 69/131 (52%), Gaps = 14/131 (10%)
Query: 38 RIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRC 97
++ + K +AD VE+L G YL + G + A L +++L + I+ H + P +
Sbjct: 128 KMSIKSKRIADSVEALIGAYLSTAGEKAAFLLMKSLGM----NIEFHTEI----PVERKI 179
Query: 98 PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
+A +R LE + Y F D LL+AL+H +Y + T+ YQRLEFLGDA
Sbjct: 180 SMKAEEFIDVR------SLEGMLGYKFNDSLLLLEALTHGSYQTSGPTSCYQRLEFLGDA 233
Query: 158 IIDFLVTAYLY 168
I+D L T Y Y
Sbjct: 234 ILDHLFTEYYY 244
>gi|347835506|emb|CCD50078.1| similar to dicer-like protein 2 [Botryotinia fuckeliana]
Length = 1378
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 94/194 (48%), Gaps = 31/194 (15%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAM----LFLQALNILPQSKIDVHEALYGPHPSAV 95
++ K+++DVVE+L G + GI A+ LF LN LP + LY + +
Sbjct: 1004 EMSSKILSDVVEALIGACMVDGGIPKALKSLQLFFPELNWLPLETRQM--TLYQQAANDL 1061
Query: 96 RCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLG 155
P R +E+ + YTF KS L++A++HP+Y + T S +RLEFLG
Sbjct: 1062 HLPIALR------------PVEQILAYTFTKKSLLVEAMTHPSYTSG--TQSLERLEFLG 1107
Query: 156 DAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYEN 215
D+I+D ++ ++ + + LS + +RSA+VN A + + + +N
Sbjct: 1108 DSILDNIIVTAMWSHSTPLSHFHMHLLRSALVNADFLAFLCMEMSID-----------QN 1156
Query: 216 VTRFAQNQEARNHE 229
VT + + R HE
Sbjct: 1157 VTNLTEGKNHRIHE 1170
Score = 42.0 bits (97), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 124 FQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIR 183
D+S + A++H +Y+ + ++YQRLEFLGD+I+ + L G +S ++
Sbjct: 899 ISDQSLIQTAITHASYS---LDSNYQRLEFLGDSILKLCTSVQLVAEHLDWHEGYLSAMK 955
Query: 184 SAMVNNVTFASYAVRLDLHKHLL 206
+V+N + A + L ++++
Sbjct: 956 DRIVSNSRSSRAAAEVGLDEYIM 978
>gi|367045744|ref|XP_003653252.1| hypothetical protein THITE_2048914 [Thielavia terrestris NRRL 8126]
gi|347000514|gb|AEO66916.1| hypothetical protein THITE_2048914 [Thielavia terrestris NRRL 8126]
Length = 1591
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 17/194 (8%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLF---LQALNILPQSK---IDVHEALYGPH--P 92
L DK +ADV E+L G + + F +QA+ L + K + + Y + P
Sbjct: 1201 LADKTIADVCEALIGAAYLTAQEKDPNNFDLAVQAVTALVKDKNHTMTSYRDYYAAYVKP 1260
Query: 93 SAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNA--NRITTSYQR 150
P + LD + R+ Y F+ L A HPTY + R+ SYQR
Sbjct: 1261 DWQTAPANSTQLD------MAARFHARMGYAFKHPRLLRSAFQHPTYPSMYERLP-SYQR 1313
Query: 151 LEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSP 210
LEFLGDA++D +L+ F P +++ + AMV+N AV L H+ L + SP
Sbjct: 1314 LEFLGDALLDMASVEFLFHRFPGADPQWLTEHKMAMVSNQFLGCLAVELGFHRALTYCSP 1373
Query: 211 RLYENVTRFAQNQE 224
L + + E
Sbjct: 1374 ALQREIGEYVAEME 1387
>gi|222055246|ref|YP_002537608.1| Ribonuclease III [Geobacter daltonii FRC-32]
gi|221564535|gb|ACM20507.1| Ribonuclease III [Geobacter daltonii FRC-32]
Length = 238
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 113 CTQLEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
LEK INY F DKS L++AL+HP++ + ++ QRLEFLGDA++ +++ L+
Sbjct: 9 IAALEKLINYDFTDKSLLVEALTHPSFVNESGGKVRQDNQRLEFLGDAVVGLVLSHDLFS 68
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
F GE++ +R+++V+ + A A +DL HL
Sbjct: 69 RFPDSREGELTKLRASLVDEASLAILARAIDLGAHL 104
>gi|171689324|ref|XP_001909602.1| hypothetical protein [Podospora anserina S mat+]
gi|170944624|emb|CAP70735.1| unnamed protein product [Podospora anserina S mat+]
Length = 1406
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 79/158 (50%), Gaps = 23/158 (14%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDV----HEALYGPHPSAV 95
++ K +ADVVE+L G S GI A+ + LP++K + LY P
Sbjct: 1014 EMSTKTLADVVEALIGASHISGGINKALACISLF--LPEAKWQSIDHGRQVLYDEAPDDE 1071
Query: 96 RCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLG 155
P P LEK I YTF+ KS L++A++HP++N S RLEFLG
Sbjct: 1072 PLP------------PNMHLLEKLIGYTFKKKSLLIEAMTHPSFNVQDTRASLDRLEFLG 1119
Query: 156 DAIIDFLVTAYLYENFSHLS--PGEISD---IRSAMVN 188
DAI+D+LV L+ L+ P E S +R+A+VN
Sbjct: 1120 DAILDYLVVESLFSLREPLTGLPLENSKLHLLRTALVN 1157
>gi|425772078|gb|EKV10503.1| RNA helicase/RNAse III, putative [Penicillium digitatum Pd1]
gi|425777255|gb|EKV15436.1| RNA helicase/RNAse III, putative [Penicillium digitatum PHI26]
Length = 1372
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 97/196 (49%), Gaps = 5/196 (2%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKIDVHEALYGPHPSAVRCP- 98
L +K +ADV E+L G L S G + + ++A+ + S+ + + + SA P
Sbjct: 1115 LSEKTIADVCEALIGASLLSGGDDHRYDMAVKAVTVFVNSQKHTATS-WKDYISAYSIPL 1173
Query: 99 EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITT-SYQRLEFLGDA 157
Q + D + Q+ +++ Y F+ L A +HP+Y YQRLE+LGDA
Sbjct: 1174 YQKKAADGFE-MNLAQQIFEKVGYEFKYPRLLRSAFTHPSYPLTWAKVPCYQRLEYLGDA 1232
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
++D + +L+ F P +++ + AMV+N + AV+L LH HL H S L +
Sbjct: 1233 LLDMVCVEHLFHRFPTRDPQWLTEHKMAMVSNKFLGALAVKLGLHLHLQHFSNPLMIQNS 1292
Query: 218 RFAQNQEARNHEISDE 233
++A+ + E + E
Sbjct: 1293 KYAEELQLAESESNGE 1308
>gi|312793340|ref|YP_004026263.1| ribonuclease iii [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180480|gb|ADQ40650.1| ribonuclease III [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 222
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
++E+ + YTF+DK+ L AL+H + + Y+R EFLGDA ++ V+ YL+ +F L
Sbjct: 3 EIERALGYTFKDKNLLRLALTHKSATHSN-KNCYERFEFLGDAALELAVSKYLFVHFPEL 61
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQ 223
S GE+++IR+A+V + T + A +L+L H++ E + +F +N+
Sbjct: 62 SEGELTNIRAAVVCSQTLSKVAEKLNLKNHIIFGKR---EKMEKFHENK 107
>gi|409082707|gb|EKM83065.1| hypothetical protein AGABI1DRAFT_125544 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1430
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 52/165 (31%), Positives = 85/165 (51%), Gaps = 18/165 (10%)
Query: 48 DVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPE-QARGLDP 106
D VE+L G + GI A+ ++ + + G P RC +AR +
Sbjct: 1079 DCVEALLGASFLAGGIPMAL----------RTGVCFGLSFGGIQPWGERCRRAEAREIG- 1127
Query: 107 LRYIPE-CTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTA 165
+P LEK I Y F++ L++A++HP+ + T SYQRLEFLGD++I LVT
Sbjct: 1128 ---VPALVAGLEKEIGYVFENPELLVEAVTHPSLEFSS-TPSYQRLEFLGDSVIKMLVTE 1183
Query: 166 YLYENFSHLSPGEISDIRSAMVNNVTFASYAVR-LDLHKHLLHDS 209
YL+ F + +++ R+ + + A A+R + +HK+LL +S
Sbjct: 1184 YLFHKFPKATSHQLALPRTKAICSPALAHIAIRKIHIHKYLLQNS 1228
Score = 46.6 bits (109), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 120 INYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEI 179
I F L++AL+ P +A+ S QRLE LGDA++D T +L + G++
Sbjct: 957 IGLPFIPDDLLMEALTLPNVDAD---FSNQRLETLGDAVLDICTTVHLMFKYPRRHEGQL 1013
Query: 180 SDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEE 239
S +R+ V+N S A ++L + + S ++ F + + EI D + + +
Sbjct: 1014 STLRAGRVSNKFLVSCARTVELERFI--SSEKMGVEKWPFVEQKGYEAKEIRDRKSVKRQ 1071
Query: 240 --EEGIVRCL 247
G+ C+
Sbjct: 1072 IPRRGLQDCV 1081
>gi|91205996|ref|YP_538351.1| ribonuclease III [Rickettsia bellii RML369-C]
gi|157826640|ref|YP_001495704.1| ribonuclease III [Rickettsia bellii OSU 85-389]
gi|122425284|sp|Q1RHA2.1|RNC_RICBR RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|189043340|sp|A8GYE2.1|RNC_RICB8 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|91069540|gb|ABE05262.1| Ribonuclease III [Rickettsia bellii RML369-C]
gi|157801944|gb|ABV78667.1| ribonuclease III [Rickettsia bellii OSU 85-389]
Length = 227
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 68/119 (57%), Gaps = 19/119 (15%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPT------YNANRITTSYQRLEFLGDAIIDFLVTAYLY 168
+LEK ++Y+F++K+ L +ALSHP+ Y AN+ Y+RLEFLGDA+++ ++T L+
Sbjct: 6 ELEKLLDYSFKNKALLTEALSHPSLRQHHEYKANK---DYERLEFLGDAVLNLIITEILF 62
Query: 169 ENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL----------HDSPRLYENVT 217
NF + G ++ IRS +V T +L L +++ D+P ENVT
Sbjct: 63 NNFKEYNEGNLAKIRSYLVCKETICVVGAKLGLKNYIIMTHGEEIAGGRDNPNNIENVT 121
>gi|409042283|gb|EKM51767.1| hypothetical protein PHACADRAFT_150441 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1556
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 59/206 (28%), Positives = 101/206 (49%), Gaps = 40/206 (19%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPE 99
+L K++ADVVESL G G + A +Q ++ ID E + P+ C E
Sbjct: 1185 ELSTKMLADVVESLIGAAYEHGGFDLATECMQLFHL----GIDTWETV----PA---CVE 1233
Query: 100 QARG-LDPLRYIPECTQL-EKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
++ G ++ L +P +L E+ + Y F + L++AL+H +Y T SY+RLEF+GDA
Sbjct: 1234 KSLGHIEELGELPPALELVERMVGYKFSKRVLLVEALTHASYTGVIETQSYERLEFIGDA 1293
Query: 158 IIDFLVTAYLYE-NFSHLSPGEISDIRSAMVNN--------------------------V 190
++D +VT +LY + +PG + + A+VN+ +
Sbjct: 1294 VLDMIVTDFLYHVPGKNYTPGHMHLRKEALVNSHLLAFACMNTHVDVDASMPAWNAQDGI 1353
Query: 191 TFASYAVRLDLHKHLLHDSPRLYENV 216
+ R+ L + LLH SPR+ +++
Sbjct: 1354 VLDTATQRIPLCRCLLHSSPRVLDDL 1379
Score = 43.5 bits (101), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 34/62 (54%)
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
SYQRLE LGD ++ ++V+ L+ + G ++ + VNN A A+RL L ++
Sbjct: 1026 SYQRLETLGDTVLKYIVSVLLHAQYPLWHEGYLARRKDHAVNNNRLAKEALRLGLQTWII 1085
Query: 207 HD 208
D
Sbjct: 1086 RD 1087
>gi|148925776|ref|ZP_01809464.1| ribonuclease III [Campylobacter jejuni subsp. jejuni CG8486]
gi|145845786|gb|EDK22877.1| ribonuclease III [Campylobacter jejuni subsp. jejuni CG8486]
Length = 229
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 64/99 (64%), Gaps = 3/99 (3%)
Query: 108 RYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYL 167
+ + +LE+ + Y F+DK+ L+ AL+H ++ + + + +RLEFLGDA++D +V YL
Sbjct: 4 KMMKNIEKLEQSLTYEFKDKNLLIHALTHKSF---KKSYNNERLEFLGDAVLDLVVGEYL 60
Query: 168 YENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ F+ + G++S +R+A+VN +FA A L+L +L
Sbjct: 61 FHKFAKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFIL 99
>gi|158706454|sp|Q0CW42.2|DCL1_ASPTN RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1519
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 3/181 (1%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKIDVHEALYGPHPSAVRCPE 99
L +K +ADV E+L G L + G + + ++A++ + S + + A + + S P+
Sbjct: 1163 LAEKTIADVCEALIGAALLTPGPQHRFDMGVRAVSAVVDSN-EHNAASWRDYISLYSIPK 1221
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLGDAI 158
I C ++E+++ Y F+ L A +HP+Y +A YQ LEFLGDA+
Sbjct: 1222 YQEQAPDGSEIDLCRRVEEKLGYHFRYPRLLHSAFTHPSYPSAWARVPCYQSLEFLGDAL 1281
Query: 159 IDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTR 218
+D + L+ F P +++ + AMV+N + AV+L LH HL + S L +T
Sbjct: 1282 LDMVCVEDLFRRFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLSYFSSALQSQITH 1341
Query: 219 F 219
+
Sbjct: 1342 Y 1342
>gi|115387529|ref|XP_001211270.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195354|gb|EAU37054.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1344
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 92/181 (50%), Gaps = 3/181 (1%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKIDVHEALYGPHPSAVRCPE 99
L +K +ADV E+L G L + G + + ++A++ + S + + A + + S P+
Sbjct: 1137 LAEKTIADVCEALIGAALLTPGPQHRFDMGVRAVSAVVDSN-EHNAASWRDYISLYSIPK 1195
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLGDAI 158
I C ++E+++ Y F+ L A +HP+Y +A YQ LEFLGDA+
Sbjct: 1196 YQEQAPDGSEIDLCRRVEEKLGYHFRYPRLLHSAFTHPSYPSAWARVPCYQSLEFLGDAL 1255
Query: 159 IDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTR 218
+D + L+ F P +++ + AMV+N + AV+L LH HL + S L +T
Sbjct: 1256 LDMVCVEDLFRRFPDRDPQWLTEHKMAMVSNKFLGALAVKLGLHTHLSYFSSALQSQITH 1315
Query: 219 F 219
+
Sbjct: 1316 Y 1316
>gi|125973448|ref|YP_001037358.1| ribonuclease III [Clostridium thermocellum ATCC 27405]
gi|256005344|ref|ZP_05430309.1| ribonuclease III [Clostridium thermocellum DSM 2360]
gi|281417648|ref|ZP_06248668.1| ribonuclease III [Clostridium thermocellum JW20]
gi|385778635|ref|YP_005687800.1| ribonuclease III [Clostridium thermocellum DSM 1313]
gi|419721747|ref|ZP_14248903.1| Ribonuclease 3 [Clostridium thermocellum AD2]
gi|419724640|ref|ZP_14251701.1| Ribonuclease 3 [Clostridium thermocellum YS]
gi|125713673|gb|ABN52165.1| ribonuclease III [Clostridium thermocellum ATCC 27405]
gi|255990663|gb|EEU00780.1| ribonuclease III [Clostridium thermocellum DSM 2360]
gi|281409050|gb|EFB39308.1| ribonuclease III [Clostridium thermocellum JW20]
gi|316940315|gb|ADU74349.1| ribonuclease III [Clostridium thermocellum DSM 1313]
gi|380771991|gb|EIC05850.1| Ribonuclease 3 [Clostridium thermocellum YS]
gi|380782201|gb|EIC11843.1| Ribonuclease 3 [Clostridium thermocellum AD2]
Length = 236
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 65/102 (63%), Gaps = 5/102 (4%)
Query: 109 YIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRI----TTSYQRLEFLGDAIIDFLVT 164
++ +LE+ I+Y F+DK L+ AL+H +Y AN TS +RLEFLGD +++ +V+
Sbjct: 7 FMGMINELERVIDYCFEDKMKLVLALTHSSY-ANECRDERITSNERLEFLGDTVLNMVVS 65
Query: 165 AYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
Y+Y+N S+L+ GE++ R+ +V T A A L + K+LL
Sbjct: 66 EYIYKNCSYLAEGEMTKFRANVVCERTLAECAQNLSIGKYLL 107
>gi|225684422|gb|EEH22706.1| dicer [Paracoccidioides brasiliensis Pb03]
Length = 1469
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 41 LGDKVVADVVESLTGVYLRSCG--------IEGAMLFLQALNILPQSKIDVHEALYG-PH 91
L DK +AD+ E+L G L S G ++ F+ + N S + LY P
Sbjct: 1129 LADKSIADICEALIGASLLSGGRVHRFDTAVKAVTAFVNSGN-HQVSDWQSYVGLYSLPR 1187
Query: 92 PSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQR 150
+ L Q+ R+ Y F+ L A +H +Y YQR
Sbjct: 1188 YQIAEADDTQLDL--------AQQIGDRLGYRFKYPRLLSSAFTHASYPTGWSKVPCYQR 1239
Query: 151 LEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSP 210
LEFLGD+++D + +LY + P +++ + AMV+N + AV+L LH+HLL+ S
Sbjct: 1240 LEFLGDSLLDMVCVEHLYHKYPDRDPQWLTEHKMAMVSNKFLGAVAVKLGLHRHLLYFSK 1299
Query: 211 RLYENVTRF 219
L +TR+
Sbjct: 1300 ALLGQITRY 1308
>gi|222824476|ref|YP_002576050.1| ribonuclease III [Campylobacter lari RM2100]
gi|222539697|gb|ACM64798.1| ribonuclease III [Campylobacter lari RM2100]
Length = 222
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 61/87 (70%), Gaps = 3/87 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+L++R+NY F+++ L++AL+H +Y + + +RLEFLGDA++D +V +L+ F
Sbjct: 4 KLQERLNYHFKNEQLLIEALTHKSY---KKPYNNERLEFLGDAVMDLVVGEFLFFKFQKE 60
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDL 201
S G +S +R+A+VN +FA+ A +LDL
Sbjct: 61 SEGNLSKLRAALVNEKSFANLAQKLDL 87
>gi|374296685|ref|YP_005046876.1| ribonuclease III [Clostridium clariflavum DSM 19732]
gi|359826179|gb|AEV68952.1| ribonuclease III [Clostridium clariflavum DSM 19732]
Length = 235
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYN---ANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+LE RI Y F+DK+ L+ AL+H +Y N S +RLEFLGD+++ +V+ +Y N+
Sbjct: 13 ELENRIQYKFKDKNNLILALTHSSYANEYKNEKLISNERLEFLGDSVLSVIVSENIYRNY 72
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
HLS GE++ R+ +V + A+ L++ K+LL
Sbjct: 73 GHLSEGEMTKFRANVVCEASLEHCALNLNIGKYLL 107
>gi|226294068|gb|EEH49488.1| Dicer [Paracoccidioides brasiliensis Pb18]
Length = 1423
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 86/189 (45%), Gaps = 19/189 (10%)
Query: 41 LGDKVVADVVESLTGVYLRSCG--------IEGAMLFLQALNILPQSKIDVHEALYG-PH 91
L DK +AD+ E+L G L S G ++ F+ + N S + LY P
Sbjct: 1068 LADKSIADICEALIGASLLSGGRVHRFDTAVKAVTAFVNSEN-HQVSDWQSYVGLYSLPR 1126
Query: 92 PSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQR 150
+ L Q+ R+ Y F+ L A +H +Y YQR
Sbjct: 1127 YQIAEADDTQLDL--------AQQIGDRLGYRFKYPRLLSSAFTHASYPTGWSKVPCYQR 1178
Query: 151 LEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSP 210
LEFLGD+++D + +LY + P +++ + AMV+N + AV+L LH+HLL+ S
Sbjct: 1179 LEFLGDSLLDMVCVEHLYHKYPDRDPQWLTEHKMAMVSNKFLGAVAVKLGLHRHLLYFSK 1238
Query: 211 RLYENVTRF 219
L +TR+
Sbjct: 1239 ALLGQITRY 1247
>gi|167627437|ref|YP_001677937.1| ribonuclease III [Francisella philomiragia subsp. philomiragia ATCC
25017]
gi|189043314|sp|B0TXH8.1|RNC_FRAP2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|167597438|gb|ABZ87436.1| Ribonuclease III [Francisella philomiragia subsp. philomiragia ATCC
25017]
Length = 230
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+PE ++L K + Y+F++ + L++AL+H + + +Y+RLEFLGD+I+ F++ LY
Sbjct: 2 VPEYSRLYKILGYSFKNYTLLVRALTHRS----KTKKNYERLEFLGDSILGFVIAEVLYM 57
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
F L+ G++S IRS +V VT A+ A+ L ++++
Sbjct: 58 EFPDLAEGKLSQIRSKLVKGVTLANLALNFKLDEYII 94
>gi|389740167|gb|EIM81358.1| P-loop containing nucleoside triphosphate hydrolase protein [Stereum
hirsutum FP-91666 SS1]
Length = 1537
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 130/295 (44%), Gaps = 54/295 (18%)
Query: 22 VSSPEKLPSSSYNFLDRIK----LGDKVVADVVESLTGV-YLRSC---GIEGAMLFLQAL 73
V P+K PS + R K + KV+ADVVE+L G Y+ +E +F L
Sbjct: 1126 VKRPQKGPSEAKK-KQRAKAQGEISTKVLADVVEALIGAAYIHGSFDLAVECIKVFGLGL 1184
Query: 74 NILPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIP-ECTQLEKRINYTFQDKSFLLQ 132
+ E L P A R + L + P + + +E + YTF+ K+ L++
Sbjct: 1185 SC---------EWL----PIAARIEPMLSRVIELEFFPTQLSAVENILGYTFERKALLVE 1231
Query: 133 ALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH-LSPGEISDIRSAMVNNVT 191
AL+H +Y + T SY+R+EFLGDA++D LVT YLY P E+ ++A+VN
Sbjct: 1232 ALTHASYQTDLGTISYERMEFLGDAVLDMLVTDYLYHAPGKDYKPAELHLRKTAVVNGHF 1291
Query: 192 FASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFL 251
+R + + P N N R + + E+++E + +CL+
Sbjct: 1292 LGFICLRAS--TFISTEMPTKVNN-----PNSRRRGNAFLIQLEQQQERLYLSKCLLHSN 1344
Query: 252 IEEKDVQTDVYGR-----------------------VVEYVDVPKALGDVFEALV 283
+ ++Q++ + R + +++ PK L D+ E+L+
Sbjct: 1345 SKVLELQSNAFARFEKTDGGEHIERSLLEDPIFPWAALTWLEAPKFLSDMVESLI 1399
>gi|254876541|ref|ZP_05249251.1| ribonuclease III [Francisella philomiragia subsp. philomiragia ATCC
25015]
gi|254842562|gb|EET20976.1| ribonuclease III [Francisella philomiragia subsp. philomiragia ATCC
25015]
Length = 230
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 64/97 (65%), Gaps = 4/97 (4%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+PE ++L K + Y+F++ + L++AL+H + + +Y+RLEFLGD+I+ F++ LY
Sbjct: 2 VPEYSRLYKILGYSFKNYTLLVRALTHRS----KTKKNYERLEFLGDSILGFVIAEVLYM 57
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
F L+ G++S IRS +V VT A+ A+ L ++++
Sbjct: 58 EFPDLAEGKLSQIRSKLVKGVTLANLALNFKLDEYII 94
>gi|83774779|dbj|BAE64902.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1256
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 11/171 (6%)
Query: 38 RIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRC 97
R +G VAD+V++L G G++ A F+ A ++P+ K +LY S R
Sbjct: 949 RRYVGAATVADMVKALAGAAFLDNGLDQA--FICAAAMIPKIKSWTTISLYDGTYSKSR- 1005
Query: 98 PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
P ++ G + LE + YTF DKS +++++HP+ T SY+RL FLG
Sbjct: 1006 PSKSLGASTI------IDLEALLGYTFSDKSLAIESMTHPSCVGLYGTASYRRLSFLGAG 1059
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
II+ +V YL+ S S + ++SA+ NN+ A L H HD
Sbjct: 1060 IIELVVVRYLHRQKSFTSSKRLQSLKSAVTNNMFLAFLC--LTFHWEKQHD 1108
>gi|391873779|gb|EIT82787.1| dsRNA-specific nuclease Dicer [Aspergillus oryzae 3.042]
Length = 1089
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 84/171 (49%), Gaps = 11/171 (6%)
Query: 38 RIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRC 97
R +G VAD+V++L G G++ A F+ A ++P+ K +LY S R
Sbjct: 782 RRYVGAATVADMVKALAGAAFLDNGLDQA--FICAAAMIPKIKSWTTISLYDGTYSKSR- 838
Query: 98 PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
P ++ G + LE + YTF DKS +++++HP+ T SY+RL FLG
Sbjct: 839 PSKSLGASTI------IDLEALLGYTFSDKSLAIESMTHPSCVGLYGTASYRRLSFLGAG 892
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
II+ +V YL+ S S + ++SA+ NN+ A L H HD
Sbjct: 893 IIELVVVRYLHRQKSFTSSKRLQSLKSAVTNNMFLAFLC--LTFHWEKQHD 941
>gi|33593415|ref|NP_881059.1| ribonuclease III [Bordetella pertussis Tohama I]
gi|33597819|ref|NP_885462.1| ribonuclease III [Bordetella parapertussis 12822]
gi|33602721|ref|NP_890281.1| ribonuclease III [Bordetella bronchiseptica RB50]
gi|384204710|ref|YP_005590449.1| ribonuclease III [Bordetella pertussis CS]
gi|408416453|ref|YP_006627160.1| ribonuclease III [Bordetella pertussis 18323]
gi|410473788|ref|YP_006897069.1| ribonuclease III [Bordetella parapertussis Bpp5]
gi|427815737|ref|ZP_18982801.1| ribonuclease III [Bordetella bronchiseptica 1289]
gi|427818292|ref|ZP_18985355.1| ribonuclease III [Bordetella bronchiseptica D445]
gi|427825850|ref|ZP_18992912.1| ribonuclease III [Bordetella bronchiseptica Bbr77]
gi|81424808|sp|Q7VW39.1|RNC_BORPE RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|81426476|sp|Q7W5J6.1|RNC_BORPA RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|81429935|sp|Q7WD32.1|RNC_BORBR RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|33572771|emb|CAE42703.1| ribonuclease III [Bordetella pertussis Tohama I]
gi|33574248|emb|CAE38580.1| ribonuclease III [Bordetella parapertussis]
gi|33577163|emb|CAE35720.1| ribonuclease III [Bordetella bronchiseptica RB50]
gi|332382824|gb|AEE67671.1| ribonuclease III [Bordetella pertussis CS]
gi|401778623|emb|CCJ64063.1| ribonuclease III [Bordetella pertussis 18323]
gi|408443898|emb|CCJ50592.1| ribonuclease III [Bordetella parapertussis Bpp5]
gi|410566737|emb|CCN24306.1| ribonuclease III [Bordetella bronchiseptica 1289]
gi|410569292|emb|CCN17385.1| ribonuclease III [Bordetella bronchiseptica D445]
gi|410591115|emb|CCN06212.1| ribonuclease III [Bordetella bronchiseptica Bbr77]
Length = 256
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE R+++ F DK+ L QAL+H ++ A +RLEFLGD++++F+V A L+E + L
Sbjct: 9 LETRLDHRFGDKALLEQALTHRSHGARH----NERLEFLGDSVLNFVVAAMLFERYGKLD 64
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G++S +R+ +V + A A RLDL ++L
Sbjct: 65 EGDLSRLRANLVKQASLADIAQRLDLSQYL 94
>gi|410421196|ref|YP_006901645.1| ribonuclease III [Bordetella bronchiseptica MO149]
gi|408448491|emb|CCJ60174.1| ribonuclease III [Bordetella bronchiseptica MO149]
Length = 256
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE R+++ F DK+ L QAL+H ++ A +RLEFLGD++++F+V A L+E + L
Sbjct: 9 LETRLDHRFGDKALLEQALTHRSHGARH----NERLEFLGDSVLNFVVAAMLFERYGKLD 64
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G++S +R+ +V + A A RLDL ++L
Sbjct: 65 EGDLSRLRANLVKQASLADIAQRLDLSQYL 94
>gi|393238576|gb|EJD46112.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 1427
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/248 (26%), Positives = 114/248 (45%), Gaps = 49/248 (19%)
Query: 38 RIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNIL--PQSKIDVHEALYGPHPSAV 95
++++ + + + VE+L G S G+ A+ L + P K+ E P PS
Sbjct: 1048 KVEMPRRSMQECVEALLGAAFASGGVPCALAVGGKLGLCFGPPDKLWT-ERYVKPVPS-- 1104
Query: 96 RCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLG 155
PLR P +L++R+ + F +++ LL+A++H + ++ T SY+RLEFLG
Sbjct: 1105 ----------PLRR-PLLHELQQRLGHEFANETLLLEAVTHRSMQSSE-TPSYERLEFLG 1152
Query: 156 DAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASY-AVRLDLHKHLLHDSPRLYE 214
DA++D V YL++ + + G++S R V N T A A RL +H+ LL +
Sbjct: 1153 DALLDMAVMQYLFKKYPQATCGQLSWARQRAVCNSTLAWIAATRLHVHECLL-------Q 1205
Query: 215 NVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKA 274
N A+ +A E+ + E+ +G +D+PK
Sbjct: 1206 NHIELAKVIDAARQELIEMSAEQVIRDGW------------------------KMDMPKP 1241
Query: 275 LGDVFEAL 282
GD+ EA+
Sbjct: 1242 PGDLVEAV 1249
>gi|374308055|ref|YP_005054486.1| ribonuclease III [Filifactor alocis ATCC 35896]
gi|291165574|gb|EFE27623.1| ribonuclease III [Filifactor alocis ATCC 35896]
Length = 229
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAY 166
+ E + +K+I YTFQD+ L +AL+H +Y N N+ +RLEFLGD+I+ +V+ Y
Sbjct: 1 MKELKEFQKKIGYTFQDEKLLREALTHTSYINENRNKNLRPNERLEFLGDSILGVVVSTY 60
Query: 167 LYENFSHLSPGEISDIRSAMVNNVTFASYAVRLD 200
L+E L GE+S IR+++V + A RLD
Sbjct: 61 LFEKRKDLPEGELSKIRASIVCEDSLQLVAKRLD 94
>gi|343428057|emb|CBQ71581.1| related to cell cycle control protein dicer [Sporisorium reilianum
SRZ2]
Length = 1683
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/246 (27%), Positives = 112/246 (45%), Gaps = 46/246 (18%)
Query: 43 DKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDV---HEALYGPHPSAVRCPE 99
+K ++D+VE+L G L + G + A+L + N+LP S + ++ L A+
Sbjct: 1263 EKTLSDMVEALLGAALLTAGPDLALLVCRVFNLLPASITTLASFNDLLLTLKQQAIAENW 1322
Query: 100 QAR----GLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLG 155
Q+R GLD L+ ++T++ L+A +HP+ A+ + SYQRLEFLG
Sbjct: 1323 QSRISRSGLD---------HLQSLFDHTYRYPHLGLEAFTHPSLLAS-VLPSYQRLEFLG 1372
Query: 156 DAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYEN 215
DA +DF + ++ SPGE++ + + +N + VRL LH + DS L ++
Sbjct: 1373 DAWLDFCIVRMIFAEGEERSPGEMTAHKGVLASNGALGALGVRLGLHAFVASDSAVLGDS 1432
Query: 216 VTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKAL 275
+ R+A + D + + R+ V VPKA+
Sbjct: 1433 IARYAAA-----------------------------LGSVDEKGQYWTRLARGVVVPKAV 1463
Query: 276 GDVFEA 281
DV EA
Sbjct: 1464 ADVVEA 1469
>gi|170099920|ref|XP_001881178.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164643857|gb|EDR08108.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1469
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/169 (34%), Positives = 85/169 (50%), Gaps = 20/169 (11%)
Query: 41 LGDKVVADVVESLTGV-YLRS---CGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAV- 95
L KV+ADVVES+ G YL G E F L + P P+ +
Sbjct: 1091 LSTKVLADVVESIIGAAYLHGGFDLGYECIKFFDLGLK-------------WQPLPTRIE 1137
Query: 96 RCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTS-YQRLEFL 154
+ +AR + Y + +E + YTF K L++AL+H +Y ++ T+S Y+R+EFL
Sbjct: 1138 QLLSRARDSEETPYPHQLVDVESMLGYTFNHKLLLIEALTHASYQQDQYTSSSYERMEFL 1197
Query: 155 GDAIIDFLVTAYLYEN-FSHLSPGEISDIRSAMVNNVTFASYAVRLDLH 202
GD+I+D +VT YLY SPG + +SA+VN A +R LH
Sbjct: 1198 GDSILDMIVTDYLYRAPGKEYSPGHMHLRKSAVVNAHFLAFICLRTCLH 1246
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 129 FLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
L+ A++ P+ N + +YQRLE LGD ++ F+ L + G ++ + V+
Sbjct: 970 LLMVAITAPSSNERK---NYQRLETLGDTVLKFVCGIQLLSEYPLWHEGYLTRKKDHAVS 1026
Query: 189 NVTFASYAVRLDLHKHLLHD 208
NV A V +L++ ++ D
Sbjct: 1027 NVRLAKENVARELYRWIIRD 1046
>gi|189199432|ref|XP_001936053.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187983152|gb|EDU48640.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1439
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 84/160 (52%), Gaps = 24/160 (15%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKI----DVHEALY--GPHPSAVRC 97
K++ADV+ESL G G A +Q L LP + + + LY PH V
Sbjct: 1065 KLIADVIESLIGASYIIGGFPKAFACVQTL--LPLERWTPLSEAKDILYDAAPHQDTV-- 1120
Query: 98 PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
+ GL +EK + Y F +K+ LL+AL+H T+ SY+R EFLGDA
Sbjct: 1121 --MSLGL-----------VEKLLGYKFTNKALLLEALTHVTFRGLNTNCSYERHEFLGDA 1167
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAV 197
++D++V+ L+ + LS ++ IR+AMV N +F +Y++
Sbjct: 1168 VLDYIVSRRLFAHKPELSHRKMHGIRTAMV-NASFLAYSM 1206
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/79 (27%), Positives = 38/79 (48%), Gaps = 3/79 (3%)
Query: 129 FLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
L+ AL+ N YQRLEFLGD I+ F+ + +L + G ++ + +V+
Sbjct: 959 ILVTALTSSALNEG---NDYQRLEFLGDCILKFIASLHLMAANLQMPEGMLTGKKGKLVS 1015
Query: 189 NVTFASYAVRLDLHKHLLH 207
N A + L +++ H
Sbjct: 1016 NGYLARATLAAGLDQYIFH 1034
>gi|412341945|ref|YP_006970700.1| ribonuclease III [Bordetella bronchiseptica 253]
gi|408771779|emb|CCJ56583.1| ribonuclease III [Bordetella bronchiseptica 253]
Length = 256
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE R+++ F DK+ L QAL+H ++ A +RLEFLGD++++F+V A L+E + L
Sbjct: 9 LETRLDHRFGDKALLEQALTHRSHGARH----NERLEFLGDSVLNFVVAAMLFERYGKLD 64
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G++S +R+ +V + A A RLDL ++L
Sbjct: 65 EGDLSRLRANLVKQASLADIAQRLDLSQYL 94
>gi|317156821|ref|XP_001826035.2| hypothetical protein AOR_1_660054 [Aspergillus oryzae RIB40]
Length = 939
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 9/156 (5%)
Query: 38 RIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRC 97
R +G VAD+V++L G G++ A F+ A ++P+ K +LY S R
Sbjct: 632 RRYVGAATVADMVKALAGAAFLDNGLDQA--FICAAAMIPKIKSWTTISLYDGTYSKSR- 688
Query: 98 PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
P ++ G + LE + YTF DKS +++++HP+ T SY+RL FLG
Sbjct: 689 PSKSLGASTI------IDLEALLGYTFSDKSLAIESMTHPSCVGLYGTASYRRLSFLGAG 742
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFA 193
II+ +V YL+ S S + ++SA+ NN+ A
Sbjct: 743 IIELVVVRYLHRQKSFTSSKRLQSLKSAVTNNMFLA 778
>gi|387886426|ref|YP_006316725.1| ribonuclease III [Francisella noatunensis subsp. orientalis str.
Toba 04]
gi|386871242|gb|AFJ43249.1| ribonuclease III [Francisella noatunensis subsp. orientalis str.
Toba 04]
Length = 232
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 70/115 (60%), Gaps = 12/115 (10%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+PE ++L K + Y+F++ + L++AL+H + + +Y+RLEFLGD+I+ F++ LY
Sbjct: 2 VPEYSRLYKILGYSFKNYTLLVRALTHRS----KTKKNYERLEFLGDSILGFVIAEVLYL 57
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL--------HDSPRLYENV 216
F L+ G++S IRS +V VT A+ A+ L ++++ H ++ E+V
Sbjct: 58 EFPGLAEGKLSQIRSKLVKGVTLANLALNFKLDEYIILGASEQGGHKREKILEDV 112
>gi|283953747|ref|ZP_06371278.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 414]
gi|283794788|gb|EFC33526.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 414]
Length = 224
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+ +LE+ + Y F+DK+ L+ AL+H ++ + + + +RLEFLGDA++D +V YL+
Sbjct: 1 MKNIEKLEQNLTYEFKDKNLLMHALTHKSF---KKSYNNERLEFLGDAVLDLVVGEYLFH 57
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
F+ + G++S +R+A+VN +FA A L+L
Sbjct: 58 KFAKDAEGDLSKLRAALVNEKSFAKIANSLNL 89
>gi|238492895|ref|XP_002377684.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
gi|220696178|gb|EED52520.1| conserved hypothetical protein [Aspergillus flavus NRRL3357]
Length = 790
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 50/156 (32%), Positives = 80/156 (51%), Gaps = 9/156 (5%)
Query: 38 RIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRC 97
R +G VAD+V++L G G++ A F+ A ++P+ K +LY S R
Sbjct: 483 RRYVGAATVADMVKALAGAAFLDNGLDQA--FICAAAMIPKIKSWTTISLYDGTYSKSR- 539
Query: 98 PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
P ++ G + LE + YTF DKS +++++HP+ T SY+RL FLG
Sbjct: 540 PSKSLGASTI------IDLEALLGYTFSDKSLAIESMTHPSCVGLYGTASYRRLSFLGAG 593
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFA 193
II+ +V YL+ S S + ++SA+ NN+ A
Sbjct: 594 IIELVVVRYLHRQKSFTSSKRLQSLKSAVTNNMFLA 629
>gi|336270596|ref|XP_003350057.1| hypothetical protein SMAC_00946 [Sordaria macrospora k-hell]
gi|380095449|emb|CCC06922.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1586
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 69/257 (26%), Positives = 109/257 (42%), Gaps = 40/257 (15%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKIDVHEAL-YGPH------P 92
L DK +ADV E+L G + +G+ + ++A+ + + K H + YG + P
Sbjct: 1186 LADKSIADVCEALIGAAYLTGQEKGSFDMAIKAVTAMVRDK--KHRMMNYGDYYAVYQKP 1243
Query: 93 SAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNA--NRITTSYQR 150
S P + D + +R+ Y F+ L A HPTY + R+ SYQR
Sbjct: 1244 SWQTAPANSAQRD------MADKFSERMGYKFKHPRLLRAAFQHPTYPSLYERLP-SYQR 1296
Query: 151 LEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSP 210
LEFLGDA+ D + YL+ F P +++ + AMV+N + L +K + SP
Sbjct: 1297 LEFLGDALFDMVAVDYLFRKFPAADPQWLTEHKMAMVSNQFLCCLSYHLGFYKCVATMSP 1356
Query: 211 RLY----ENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVV 266
+ E VT + EA E ++ + EE D + +
Sbjct: 1357 SILKDIAEYVTEIEEALEAAKQEAVNQGKAPEE-----------------YSRDYWVHIT 1399
Query: 267 EYVDVPKALGDVFEALV 283
+PK L DV EA +
Sbjct: 1400 HVSRLPKCLSDVVEAYI 1416
>gi|253699690|ref|YP_003020879.1| ribonuclease III [Geobacter sp. M21]
gi|251774540|gb|ACT17121.1| ribonuclease III [Geobacter sp. M21]
Length = 232
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 56/99 (56%), Gaps = 6/99 (6%)
Query: 105 DPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVT 164
DPL I E R+ Y F+D+ L +AL+H TY QRLEF GDA++DFL++
Sbjct: 7 DPLEGI------EGRLGYRFRDRGLLAEALTHRTYVNEAGGRDNQRLEFFGDAVLDFLLS 60
Query: 165 AYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHK 203
L F GE++ IR+A+V+ + A A+ LDL +
Sbjct: 61 DMLLVRFPDSREGELTRIRAALVDEASLAKIAIELDLGQ 99
>gi|226528435|ref|NP_001141713.1| uncharacterized protein LOC100273842 [Zea mays]
gi|194705648|gb|ACF86908.1| unknown [Zea mays]
gi|414870636|tpg|DAA49193.1| TPA: endoribonuclease Dicer [Zea mays]
Length = 329
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/129 (31%), Positives = 69/129 (53%), Gaps = 6/129 (4%)
Query: 97 CPEQARGLDPLRYIP-----ECTQLEKRINYTFQDKSFLLQALSHPT-YNANRITTSYQR 150
P + R P +P + T +E + Y F DKS + AL+H + Y NR +Y+R
Sbjct: 27 APREQRHDGPPGEVPPMSAKDVTAIEALLGYCFIDKSLVELALTHGSFYWPNRPGDTYER 86
Query: 151 LEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSP 210
LE+LGD ++ L++ ++ + L PG ++ +R+A V+ A AV LH+ L H +P
Sbjct: 87 LEYLGDGVLTCLMSREVFRTYRTLQPGPLTRLRAANVDTEKLARVAVHRGLHRFLRHKAP 146
Query: 211 RLYENVTRF 219
+L + + F
Sbjct: 147 KLQDQICFF 155
>gi|345875651|ref|ZP_08827442.1| ribonuclease III [Neisseria weaveri LMG 5135]
gi|417958288|ref|ZP_12601203.1| ribonuclease III [Neisseria weaveri ATCC 51223]
gi|343966946|gb|EGV35197.1| ribonuclease III [Neisseria weaveri ATCC 51223]
gi|343968726|gb|EGV36950.1| ribonuclease III [Neisseria weaveri LMG 5135]
Length = 239
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 62/97 (63%), Gaps = 4/97 (4%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
++K++ Y+F++ L+QAL+H +Y+A + +RLEF+GDA++D+ V L++ F LS
Sbjct: 14 IQKKLGYSFRNTELLVQALTHRSYSAK----NNERLEFIGDAVLDYTVAKMLFDAFPKLS 69
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
GE+S +RS +VN A A+ +++ + L + L
Sbjct: 70 EGELSRLRSNLVNEAVLADIAIEMNIGEALFLGTGEL 106
>gi|313144833|ref|ZP_07807026.1| ribonuclease 3 [Helicobacter cinaedi CCUG 18818]
gi|313129864|gb|EFR47481.1| ribonuclease 3 [Helicobacter cinaedi CCUG 18818]
gi|396078041|dbj|BAM31417.1| ribonuclease III [Helicobacter cinaedi ATCC BAA-847]
Length = 242
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Query: 111 PECTQ-LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
P+ Q LEK++ YTF+DK LL+AL+H + + + +RLEFLGDA++D LV +L+
Sbjct: 7 PKNAQALEKKLGYTFKDKKLLLEALTHKSC---KNAYNNERLEFLGDAVLDLLVGEFLFR 63
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
F GE+S +R+ +VN F A LDL
Sbjct: 64 KFPSAKEGELSKLRACIVNEKGFMKLAKSLDL 95
>gi|313896309|ref|ZP_07829862.1| ribonuclease III [Selenomonas sp. oral taxon 137 str. F0430]
gi|320529287|ref|ZP_08030377.1| ribonuclease III [Selenomonas artemidis F0399]
gi|312975108|gb|EFR40570.1| ribonuclease III [Selenomonas sp. oral taxon 137 str. F0430]
gi|320138461|gb|EFW30353.1| ribonuclease III [Selenomonas artemidis F0399]
Length = 238
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSY-QRLEFLGDAI 158
A GL P R E +L + F + + L +AL+HP+Y N +R + + +RLEFLGDA+
Sbjct: 2 AEGLSPARR-AELERLAAHMGVAFSNIALLDEALTHPSYANESRDSIPHNERLEFLGDAV 60
Query: 159 IDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
++ + YLY++F S GE++ +R+++V + T A A RL L +HL
Sbjct: 61 LELASSTYLYKHFPQCSEGELTKMRASLVQSDTLARLARRLHLGRHL 107
>gi|402303315|ref|ZP_10822411.1| ribonuclease III [Selenomonas sp. FOBRC9]
gi|400378945|gb|EJP31795.1| ribonuclease III [Selenomonas sp. FOBRC9]
Length = 238
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSY-QRLEFLGDAI 158
A GL P R E +L + F + + L +AL+HP+Y N +R + + +RLEFLGDA+
Sbjct: 2 AEGLSPARR-AELERLAAHMGVAFSNIALLDEALTHPSYANESRDSIPHNERLEFLGDAV 60
Query: 159 IDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
++ + YLY++F S GE++ +R+++V + T A A RL L +HL
Sbjct: 61 LELASSTYLYKHFPQCSEGELTKMRASLVQSDTLARLARRLHLGRHL 107
>gi|321468964|gb|EFX79946.1| hypothetical protein DAPPUDRAFT_318955 [Daphnia pulex]
Length = 311
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 66/134 (49%), Gaps = 18/134 (13%)
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLE LGDA++ LV+ LY F+ PG++ RSA+ N +F +V+ +HK LL
Sbjct: 112 RLEVLGDAVLGLLVSIGLYRTFTKYKPGDLIRHRSALTCNDSFGVLSVKFGIHKFLLGMP 171
Query: 210 PRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
P L N +F +NQE +H S++ + + Q+ + R ++
Sbjct: 172 PSLLHNANKFVENQEEASHPYSNKS---------------YSLARSTPQSSIAARCIK-- 214
Query: 270 DVPKALGDVFEALV 283
VP L DVFE++
Sbjct: 215 -VPVVLADVFESVT 227
>gi|237750847|ref|ZP_04581327.1| ribonuclease III [Helicobacter bilis ATCC 43879]
gi|229373292|gb|EEO23683.1| ribonuclease III [Helicobacter bilis ATCC 43879]
Length = 228
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 63/95 (66%), Gaps = 3/95 (3%)
Query: 111 PECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYEN 170
P LE+++NYTF++K L +AL+H ++ + + +RLEFLGDA++D +V YL+E
Sbjct: 7 PHIHILEQKLNYTFKNKKKLAEALAHKSF---KKPYNNERLEFLGDAVLDLVVGEYLFET 63
Query: 171 FSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
F+ + G +S +R+++VN +F A ++L ++L
Sbjct: 64 FTQKNEGSLSKMRASLVNEASFCKLAQSINLGEYL 98
>gi|121613213|ref|YP_001001278.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 81-176]
gi|121504230|gb|EAQ72743.2| ribonuclease III [Campylobacter jejuni subsp. jejuni 81-176]
Length = 225
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+ +LE+ + Y F+DK+ L+ AL+H ++ + + + +RLEFLGDA++D +V YL+
Sbjct: 2 MKNIEKLERSLTYEFKDKNLLIHALTHKSF---KKSYNNERLEFLGDAVLDLVVGEYLFH 58
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
F+ + G++S +R+A+VN +FA A L+L
Sbjct: 59 KFAKDAEGDLSKLRAALVNEKSFAKIANSLNL 90
>gi|297343244|pdb|3N3W|A Chain A, 2.2 Angstrom Resolution Crystal Structure Of Nuclease
Domain Ribonuclase Iii (Rnc) From Campylobacter Jejuni
gi|297343245|pdb|3N3W|B Chain B, 2.2 Angstrom Resolution Crystal Structure Of Nuclease
Domain Ribonuclase Iii (Rnc) From Campylobacter Jejuni
Length = 248
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 63/97 (64%), Gaps = 3/97 (3%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+ +LE+ + Y F+DK+ L+ AL+H ++ + + + +RLEFLGDA++D +V YL+
Sbjct: 25 MKNIEKLEQSLTYEFKDKNLLIHALTHKSF---KKSYNNERLEFLGDAVLDLVVGEYLFH 81
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
F+ + G++S +R+A+VN +FA A L+L +L
Sbjct: 82 KFAKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFIL 118
>gi|86152963|ref|ZP_01071168.1| ribonuclease III [Campylobacter jejuni subsp. jejuni HB93-13]
gi|167006173|ref|ZP_02271931.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 81-176]
gi|419617831|ref|ZP_14151397.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 129-258]
gi|419654145|ref|ZP_14185094.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 2008-872]
gi|419665962|ref|ZP_14196014.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1997-7]
gi|419668873|ref|ZP_14198676.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1997-11]
gi|419687215|ref|ZP_14215623.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1798]
gi|419691430|ref|ZP_14219550.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1928]
gi|85843848|gb|EAQ61058.1| ribonuclease III [Campylobacter jejuni subsp. jejuni HB93-13]
gi|380596428|gb|EIB17120.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 129-258]
gi|380631711|gb|EIB49874.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 2008-872]
gi|380642199|gb|EIB59482.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1997-7]
gi|380648273|gb|EIB65135.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1997-11]
gi|380662839|gb|EIB78523.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1798]
gi|380672387|gb|EIB87559.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1928]
Length = 224
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+ +LE+ + Y F+DK+ L+ AL+H ++ + + + +RLEFLGDA++D +V YL+
Sbjct: 1 MKNIEKLERSLTYEFKDKNLLIHALTHKSF---KKSYNNERLEFLGDAVLDLVVGEYLFH 57
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
F+ + G++S +R+A+VN +FA A L+L
Sbjct: 58 KFAKDAEGDLSKLRAALVNEKSFAKIANSLNL 89
>gi|57238646|ref|YP_179777.1| ribonuclease III [Campylobacter jejuni RM1221]
gi|384443998|ref|YP_005660250.1| Ribonuclease III [Campylobacter jejuni subsp. jejuni S3]
gi|81353160|sp|Q5HSF8.1|RNC_CAMJR RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|57167450|gb|AAW36229.1| ribonuclease III [Campylobacter jejuni RM1221]
gi|315059085|gb|ADT73414.1| Ribonuclease III [Campylobacter jejuni subsp. jejuni S3]
Length = 224
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+ +LE+ + Y F+DK+ L+ AL+H ++ + + + +RLEFLGDA++D +V YL+
Sbjct: 1 MKNIEKLERSLTYEFKDKNLLIHALTHKSF---KKSYNNERLEFLGDAVLDLVVGEYLFH 57
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
F+ + G++S +R+A+VN +FA A L+L
Sbjct: 58 KFAKDAEGDLSKLRAALVNEKSFAKIANSLNL 89
>gi|419683175|ref|ZP_14211884.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1213]
gi|380659791|gb|EIB75756.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1213]
Length = 224
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+ +LE+ + Y F+DK+ L+ AL+H ++ + + + +RLEFLGDA++D +V YL+
Sbjct: 1 MKNIEKLEQSLTYEFKDKNLLMHALTHKSF---KKSYNNERLEFLGDAVLDLVVGEYLFH 57
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
F+ + G++S +R+A+VN +FA A L+L
Sbjct: 58 KFAKDAEGDLSKLRAALVNEKSFAKIANSLNL 89
>gi|86152331|ref|ZP_01070542.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 260.94]
gi|315125039|ref|YP_004067043.1| ribonuclease III [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
gi|85840820|gb|EAQ58071.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 260.94]
gi|315018761|gb|ADT66854.1| ribonuclease III [Campylobacter jejuni subsp. jejuni ICDCCJ07001]
Length = 224
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+ +LE+ + Y F+DK+ L+ AL+H ++ + + + +RLEFLGDA++D +V YL+
Sbjct: 1 MKNIEKLERSLTYEFKDKNLLIHALTHKSF---KKSYNNERLEFLGDAVLDLVVGEYLFH 57
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
F+ + G++S +R+A+VN +FA A L+L
Sbjct: 58 KFAKDAEGDLSKLRAALVNEKSFAKIANSLNL 89
>gi|297836192|ref|XP_002885978.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331818|gb|EFH62237.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 740
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 100/181 (55%), Gaps = 19/181 (10%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTS--YQRLEFLGDAIIDFLVTAYLYENFSH 173
+EK +NYTF DK+ L +A++ T +N ++S ++RLEFLGD+++ + + ++ + +
Sbjct: 7 VEKILNYTFTDKNLLKEAITK-TSGSNTESSSLLFERLEFLGDSVLLVVFSNHIEITYPN 65
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPR-LYENVTRFAQNQEARNHEISD 232
L P +++D+R A V+N TFA AV +LH+ ++ D+P L ++ N+ +I D
Sbjct: 66 LHPNDLNDVRIANVSNETFARVAVNNNLHQFIIFDAPNPLLHKMSHVLTNKWCHVLKIKD 125
Query: 233 EEEEEEEE------EGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVP---KALGDVFEALV 283
E +EE G+V+ F D+ + G V Y+DV + + ++F LV
Sbjct: 126 FSEAVKEEVYPAPCGGLVKAPKFL----ADLVEAIAGAV--YIDVDFDVQRVWEIFRVLV 179
Query: 284 E 284
E
Sbjct: 180 E 180
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 11/126 (8%)
Query: 80 KIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY 139
KI +E+ PH ++ DP++ + EK +NY+F +K+ L +AL+H +
Sbjct: 347 KISSNESCL-PHERSLESLSSEIDSDPVKAV------EKILNYSFTNKNLLREALTHNSS 399
Query: 140 NANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRL 199
N +QRL F+G A I ++Y + L P E++ +++A N +A AV+
Sbjct: 400 N----LLPFQRLMFVGKAGISLAFANHMYLTYPKLGPKELTMLQNANTCNDRYARVAVKR 455
Query: 200 DLHKHL 205
+++ L
Sbjct: 456 GIYQFL 461
>gi|205355648|ref|ZP_03222418.1| ribonuclease III [Campylobacter jejuni subsp. jejuni CG8421]
gi|205346425|gb|EDZ33058.1| ribonuclease III [Campylobacter jejuni subsp. jejuni CG8421]
Length = 225
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+LE+ + Y F+DK+ L+ AL+H ++ + + + +RLEFLGDA++D +V YL+ F+
Sbjct: 7 KLEQSLTYEFKDKNLLIHALTHKSF---KKSYNNERLEFLGDAVLDLVVGEYLFHKFAKD 63
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ G++S +R+A+VN +FA A L+L +L
Sbjct: 64 AEGDLSKLRAALVNEKSFAKIANSLNLGDFIL 95
>gi|86149260|ref|ZP_01067491.1| ribonuclease III [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88596211|ref|ZP_01099448.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 84-25]
gi|218563224|ref|YP_002345004.1| ribonuclease III [Campylobacter jejuni subsp. jejuni NCTC 11168 =
ATCC 700819]
gi|317511632|ref|ZP_07968930.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 305]
gi|384448848|ref|YP_005656899.1| ribonuclease III [Campylobacter jejuni subsp. jejuni IA3902]
gi|403056346|ref|YP_006633751.1| ribonuclease III [Campylobacter jejuni subsp. jejuni NCTC
11168-BN148]
gi|407942970|ref|YP_006858617.1| ribonuclease III [Campylobacter jejuni subsp. jejuni PT14]
gi|415731373|ref|ZP_11473447.1| ribonuclease III [Campylobacter jejuni subsp. jejuni DFVF1099]
gi|419620986|ref|ZP_14154381.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 51494]
gi|419623819|ref|ZP_14156940.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23218]
gi|419625061|ref|ZP_14158085.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23223]
gi|419628386|ref|ZP_14161245.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23263]
gi|419629909|ref|ZP_14162621.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 60004]
gi|419630965|ref|ZP_14163565.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23264]
gi|419633703|ref|ZP_14166131.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23269]
gi|419635954|ref|ZP_14168241.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 55037]
gi|419637815|ref|ZP_14169964.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 9879]
gi|419639421|ref|ZP_14171450.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 86605]
gi|419645376|ref|ZP_14176925.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 9081]
gi|419647079|ref|ZP_14178522.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 53161]
gi|419649109|ref|ZP_14180411.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 9217]
gi|419650140|ref|ZP_14181366.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 2008-1025]
gi|419651560|ref|ZP_14182656.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 2008-894]
gi|419656399|ref|ZP_14187201.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 2008-988]
gi|419658399|ref|ZP_14189029.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1997-1]
gi|419661780|ref|ZP_14192099.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 2008-831]
gi|419663951|ref|ZP_14194134.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1997-4]
gi|419671772|ref|ZP_14201414.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1997-14]
gi|419673128|ref|ZP_14202607.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 51037]
gi|419675820|ref|ZP_14205079.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 110-21]
gi|419677786|ref|ZP_14206919.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 87330]
gi|419679551|ref|ZP_14208544.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 87459]
gi|419681434|ref|ZP_14210268.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 140-16]
gi|419684794|ref|ZP_14213374.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1577]
gi|419687924|ref|ZP_14216256.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1854]
gi|419690916|ref|ZP_14219105.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1893]
gi|419696155|ref|ZP_14224025.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23210]
gi|424849058|ref|ZP_18273527.1| ribonuclease III [Campylobacter jejuni subsp. jejuni D2600]
gi|22654076|sp|Q9PM40.1|RNC_CAMJE RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|85840042|gb|EAQ57300.1| ribonuclease III [Campylobacter jejuni subsp. jejuni CF93-6]
gi|88191052|gb|EAQ95024.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 84-25]
gi|112360931|emb|CAL35732.1| ribonuclease III [Campylobacter jejuni subsp. jejuni NCTC 11168 =
ATCC 700819]
gi|284926829|gb|ADC29181.1| ribonuclease III [Campylobacter jejuni subsp. jejuni IA3902]
gi|315927617|gb|EFV06948.1| ribonuclease III [Campylobacter jejuni subsp. jejuni DFVF1099]
gi|315928870|gb|EFV08132.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 305]
gi|356487695|gb|EHI17637.1| ribonuclease III [Campylobacter jejuni subsp. jejuni D2600]
gi|380597882|gb|EIB18338.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 51494]
gi|380599969|gb|EIB20317.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23218]
gi|380604482|gb|EIB24496.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23263]
gi|380605405|gb|EIB25378.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23223]
gi|380606913|gb|EIB26800.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 60004]
gi|380611214|gb|EIB30771.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 55037]
gi|380611347|gb|EIB30900.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23269]
gi|380611932|gb|EIB31472.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23264]
gi|380614766|gb|EIB34092.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 9879]
gi|380616423|gb|EIB35627.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 86605]
gi|380620465|gb|EIB39355.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 9081]
gi|380621996|gb|EIB40766.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 53161]
gi|380625526|gb|EIB44108.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 9217]
gi|380628846|gb|EIB47133.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 2008-1025]
gi|380631159|gb|EIB49369.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 2008-894]
gi|380633483|gb|EIB51436.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1997-1]
gi|380635405|gb|EIB53222.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 2008-988]
gi|380639431|gb|EIB56924.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 2008-831]
gi|380641974|gb|EIB59278.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1997-4]
gi|380648961|gb|EIB65749.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1997-14]
gi|380651181|gb|EIB67749.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 110-21]
gi|380653448|gb|EIB69868.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 87330]
gi|380654393|gb|EIB70755.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 51037]
gi|380657044|gb|EIB73153.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 87459]
gi|380658109|gb|EIB74142.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 140-16]
gi|380666172|gb|EIB81720.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1577]
gi|380666470|gb|EIB82007.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1854]
gi|380668031|gb|EIB83415.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1893]
gi|380675351|gb|EIB90258.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23210]
gi|401781998|emb|CCK67709.1| ribonuclease III [Campylobacter jejuni subsp. jejuni NCTC
11168-BN148]
gi|407906808|gb|AFU43637.1| ribonuclease III [Campylobacter jejuni subsp. jejuni PT14]
Length = 224
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+LE+ + Y F+DK+ L+ AL+H ++ + + + +RLEFLGDA++D +V YL+ F+
Sbjct: 6 KLEQSLTYEFKDKNLLIHALTHKSF---KKSYNNERLEFLGDAVLDLVVGEYLFHKFAKD 62
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ G++S +R+A+VN +FA A L+L +L
Sbjct: 63 AEGDLSKLRAALVNEKSFAKIANSLNLGDFIL 94
>gi|419659778|ref|ZP_14190291.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 2008-979]
gi|419667284|ref|ZP_14197262.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1997-10]
gi|380638585|gb|EIB56135.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 2008-979]
gi|380646268|gb|EIB63243.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1997-10]
Length = 224
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 62/92 (67%), Gaps = 3/92 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+LE+ + Y F+DK+ L+ AL+H ++ + + + +RLEFLGDA++D +V YL+ F+
Sbjct: 6 KLEQSLTYEFKDKNLLIHALTHKSF---KKSYNNERLEFLGDAVLDLVVGEYLFHKFAKD 62
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ G++S +R+A+VN +FA A L+L +L
Sbjct: 63 AEGDLSKLRAALVNEKSFAKIANSLNLGDFIL 94
>gi|407923675|gb|EKG16741.1| Ribonuclease III [Macrophomina phaseolina MS6]
Length = 1533
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/250 (28%), Positives = 102/250 (40%), Gaps = 36/250 (14%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAML------FLQALNILPQSKIDVHEALYGPHPSA 94
L DK VADV E+L G + G L ++A+ L S+ A + + SA
Sbjct: 1147 LSDKTVADVCEALIGAAYLTHNTPGKWLPENWDNAVRAVAALVSSENHAM-ASWSEYFSA 1205
Query: 95 VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNAN-RITTSYQRLEF 153
+ P I Q EK Y F+ L A HP+Y N SYQRLEF
Sbjct: 1206 YKKPSYLDAEATAAQIDLVKQAEKEHPYRFRSAKLLRSAFMHPSYPFNYEKVPSYQRLEF 1265
Query: 154 LGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLY 213
LGD++ID +L F P +++ + AMV+N + V+L HKHL +
Sbjct: 1266 LGDSLIDTACITWLIYKFPDKDPQWLTEHKMAMVSNKFLGAVCVKLGFHKHLKYS----- 1320
Query: 214 ENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPK 273
++Q + +++ E E E +G +D T V PK
Sbjct: 1321 -----YSQMEYQIRDYVTELREAERESKGA-----------RDYWTTVKS-------PPK 1357
Query: 274 ALGDVFEALV 283
L D+ EA V
Sbjct: 1358 CLPDIVEAYV 1367
>gi|224372163|ref|YP_002606535.1| ribonuclease III [Nautilia profundicola AmH]
gi|223589278|gb|ACM93014.1| ribonuclease III [Nautilia profundicola AmH]
Length = 226
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 112 ECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+ ++LEK + Y F++K + +AL+H +Y + +RLEFLGDA++D +V YL+ F
Sbjct: 2 QISELEKSLGYQFKNKKLITEALTHRSYKKE---VNNERLEFLGDAVMDLIVGEYLFHLF 58
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G +S +R+A+VN +F A RL+L K+L
Sbjct: 59 PKAEEGILSKLRAALVNEDSFTRLAKRLNLGKYL 92
>gi|189043297|sp|A8Z6F6.1|RNC_CAMC1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|158604915|gb|ABW74738.1| ribonuclease III [Campylobacter concisus 13826]
Length = 223
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+ E+ + Y F+ L +AL+H + + + +RLEFLGDA++D LV YL++ FS +
Sbjct: 6 EFERNLGYKFKKSELLEEALTHKS---TKQALNNERLEFLGDAVMDLLVAEYLFKKFSKI 62
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
+ G++S +R+A+VN +FA+ A RL + + L
Sbjct: 63 AEGDMSKLRAALVNEKSFANMARRLKMGEFL 93
>gi|337754823|ref|YP_004647334.1| ribonuclease III [Francisella sp. TX077308]
gi|336446428|gb|AEI35734.1| Ribonuclease III [Francisella sp. TX077308]
Length = 230
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 63/97 (64%), Gaps = 4/97 (4%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
IPE ++L K + Y F++ + L++AL+H + + +Y+RLEFLGD+I+ F++ LY
Sbjct: 2 IPEYSRLYKILGYNFKNYTLLVRALTHRS----KTKKNYERLEFLGDSILGFVIAEALYL 57
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
F L+ G++S IRS +V VT A+ A+ L ++++
Sbjct: 58 EFPDLAEGKLSQIRSKLVKGVTLANLALNFKLDEYVI 94
>gi|147770295|emb|CAN62473.1| hypothetical protein VITISV_005321 [Vitis vinifera]
Length = 287
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 6/136 (4%)
Query: 90 PHPSAVRCPEQ----ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRIT 145
PHP R + A + P +E+ + Y+F +K L +A +H + N+
Sbjct: 3 PHPQKPRGEGETESCADSYESAESFPSLEGVEQILGYSFTNKRLLEEAYTHASCQKNQF- 61
Query: 146 TSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
SY+RLEF+GD+++ L+T + + L PG ++ +RSA V+ A A++ LH+ L
Sbjct: 62 -SYERLEFMGDSVLSLLITKEQFFLYPDLQPGRLTRLRSANVDKEKLARVALKHGLHRFL 120
Query: 206 LHDSPRLYENVTRFAQ 221
H P++ + + FA+
Sbjct: 121 RHKKPKIEQQIYEFAE 136
>gi|153951733|ref|YP_001398912.1| ribonuclease III [Campylobacter jejuni subsp. doylei 269.97]
gi|189043301|sp|A7H5Y2.1|RNC_CAMJD RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|152939179|gb|ABS43920.1| ribonuclease III [Campylobacter jejuni subsp. doylei 269.97]
Length = 225
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+ +LE+ + Y F+DK+ L+ AL+H ++ + + + +RLEFLGDA++D +V YL+
Sbjct: 1 MKNIEKLEQSLTYEFKDKNLLIHALTHKSF---KKSYNNERLEFLGDAVLDLVVGEYLFH 57
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
F+ + G++S +R+A+VN +FA A L+L
Sbjct: 58 KFTKDAEGDLSKLRAALVNEKSFAKIANSLNL 89
>gi|359485630|ref|XP_002270948.2| PREDICTED: ribonuclease 3-like protein 3-like [Vitis vinifera]
gi|297739192|emb|CBI28843.3| unnamed protein product [Vitis vinifera]
Length = 287
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 71/136 (52%), Gaps = 6/136 (4%)
Query: 90 PHPSAVRCPEQ----ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRIT 145
PHP R + A + P +E+ + Y+F +K L +A +H + N+
Sbjct: 3 PHPQKPRGEGETESCADSYESAESFPSLEGVEQILGYSFTNKRLLEEAYTHASCQKNQF- 61
Query: 146 TSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
SY+RLEF+GD+++ L+T + + L PG ++ +RSA V+ A A++ LH+ L
Sbjct: 62 -SYERLEFMGDSVLSLLITKEQFFLYPDLQPGRLTRLRSANVDKEKLARVALKHGLHRFL 120
Query: 206 LHDSPRLYENVTRFAQ 221
H P++ + + FA+
Sbjct: 121 RHKKPKIEQQIYEFAE 136
>gi|322379758|ref|ZP_08054068.1| ribonuclease III [Helicobacter suis HS5]
gi|321147829|gb|EFX42419.1| ribonuclease III [Helicobacter suis HS5]
Length = 224
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
L+KR+ Y F+D L QAL+H + A++ + +RLEFLGDA++D +V L+ F+ L
Sbjct: 5 LQKRLGYVFKDPLLLQQALTHRSTKAHK---NNERLEFLGDAVLDLVVAEILFTRFTDLQ 61
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G++S +R+++VN F A+ L+L H+L
Sbjct: 62 EGDLSKMRASLVNEKAFFKLALSLNLQDHIL 92
>gi|157415855|ref|YP_001483111.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 81116]
gi|283957021|ref|ZP_06374493.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1336]
gi|384442208|ref|YP_005658511.1| ribonuclease 3 [Campylobacter jejuni subsp. jejuni M1]
gi|415746574|ref|ZP_11475582.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 327]
gi|419641678|ref|ZP_14173557.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23357]
gi|419643328|ref|ZP_14175076.1| ribonuclease III [Campylobacter jejuni subsp. jejuni ATCC 33560]
gi|419697815|ref|ZP_14225542.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23211]
gi|189043300|sp|A8FNU7.1|RNC_CAMJ8 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|157386819|gb|ABV53134.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 81116]
gi|283791522|gb|EFC30319.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 1336]
gi|307748491|gb|ADN91761.1| Ribonuclease 3 [Campylobacter jejuni subsp. jejuni M1]
gi|315931680|gb|EFV10641.1| ribonuclease III [Campylobacter jejuni subsp. jejuni 327]
gi|380616054|gb|EIB35273.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23357]
gi|380622316|gb|EIB41076.1| ribonuclease III [Campylobacter jejuni subsp. jejuni ATCC 33560]
gi|380676845|gb|EIB91721.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23211]
Length = 224
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+LE+ + Y F+DK+ L+ AL+H ++ + + + +RLEFLGDA++D +V YL+ F+
Sbjct: 6 KLEQSLTYEFKDKNLLIHALTHKSF---KKSYNNERLEFLGDAVLDLVVGEYLFHKFAKD 62
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDL 201
+ G++S +R+A+VN +FA A L+L
Sbjct: 63 AEGDLSKLRAALVNEKSFAKIANSLNL 89
>gi|419542137|ref|ZP_14081268.1| ribonuclease III [Campylobacter coli 2548]
gi|380523896|gb|EIA49530.1| ribonuclease III [Campylobacter coli 2548]
Length = 224
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+LE+ + Y F+DK+ L+ AL+H ++ + + + +RLEFLGDA++D +V YL+ F+
Sbjct: 6 KLEQSLTYEFKDKNLLIHALTHKSF---KKSYNNERLEFLGDAVLDLVVGEYLFHKFAKD 62
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDL 201
+ G++S +R+A+VN +FA A L+L
Sbjct: 63 AEGDLSKLRAALVNEKSFAKIANSLNL 89
>gi|419622547|ref|ZP_14155777.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23216]
gi|380599261|gb|EIB19635.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 23216]
Length = 224
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+LE+ + Y F+DK+ L+ AL+H ++ + + + +RLEFLGDA++D +V YL+ F+
Sbjct: 6 KLEQSLTYEFKDKNLLIHALTHKSF---KKSYNNERLEFLGDAVLDLVVGEYLFHKFAKD 62
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDL 201
+ G++S +R+A+VN +FA A L+L
Sbjct: 63 AEGDLSKLRAALVNEKSFAKIANSLNL 89
>gi|419694651|ref|ZP_14222609.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 9872]
gi|380670012|gb|EIB85278.1| ribonuclease III [Campylobacter jejuni subsp. jejuni LMG 9872]
Length = 224
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 61/92 (66%), Gaps = 3/92 (3%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+ +LE+ + Y F+DK+ L+ AL+H ++ + + + +RLEFLGDA++D +V YL+
Sbjct: 1 MKNIEKLEQSLTYEFKDKNLLIHALTHKSF---KKSYNNERLEFLGDAVLDLVVGEYLFH 57
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
F+ + G++S +R+A+VN +FA A L+L
Sbjct: 58 KFAKDAEGDLSKLRAALVNEKSFAKIANSLNL 89
>gi|307448395|pdb|3O2R|A Chain A, Structural Flexibility In Region Involved In Dimer
Formation Of Nuclease Domain Of Ribonuclase Iii (Rnc)
From Campylobacter Jejuni
gi|307448397|pdb|3O2R|C Chain C, Structural Flexibility In Region Involved In Dimer
Formation Of Nuclease Domain Of Ribonuclase Iii (Rnc)
From Campylobacter Jejuni
Length = 170
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 63/97 (64%), Gaps = 3/97 (3%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+ +LE+ + Y F+DK+ L+ AL+H ++ + + + +RLEFLGDA++D +V YL+
Sbjct: 25 MKNIEKLEQSLTYEFKDKNLLIHALTHKSF---KKSYNNERLEFLGDAVLDLVVGEYLFH 81
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
F+ + G++S +R+A+VN +FA A L+L +L
Sbjct: 82 KFAKDAEGDLSKLRAALVNEKSFAKIANSLNLGDFIL 118
>gi|167037696|ref|YP_001665274.1| ribonuclease III [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|320116111|ref|YP_004186270.1| ribonuclease III [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|326389510|ref|ZP_08211077.1| ribonuclease III [Thermoanaerobacter ethanolicus JW 200]
gi|345017777|ref|YP_004820130.1| ribonuclease 3 [Thermoanaerobacter wiegelii Rt8.B1]
gi|392940879|ref|ZP_10306523.1| ribonuclease III [Thermoanaerobacter siderophilus SR4]
gi|166856530|gb|ABY94938.1| Ribonuclease III [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319929202|gb|ADV79887.1| ribonuclease III [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|325994515|gb|EGD52940.1| ribonuclease III [Thermoanaerobacter ethanolicus JW 200]
gi|344033120|gb|AEM78846.1| Ribonuclease 3 [Thermoanaerobacter wiegelii Rt8.B1]
gi|392292629|gb|EIW01073.1| ribonuclease III [Thermoanaerobacter siderophilus SR4]
Length = 246
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 64/106 (60%), Gaps = 4/106 (3%)
Query: 102 RGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY--NANRITTSYQRLEFLGDAII 159
RG++ R ++LEKRINY+F+DK+ L++AL+H ++ S +RLEFLGD+++
Sbjct: 11 RGMEVKR--ENLSELEKRINYSFKDKNLLIEALTHSSWAHEGKNSKISNERLEFLGDSVL 68
Query: 160 DFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
+++ YLY+N L G +S R+ +V + A A ++L L
Sbjct: 69 SLVISEYLYKNRKDLEEGSLSKYRAEIVCEPSLARCAREIELGNFL 114
>gi|424846628|ref|ZP_18271222.1| ribonuclease III [Campylobacter jejuni subsp. jejuni NW]
gi|356485926|gb|EHI15913.1| ribonuclease III [Campylobacter jejuni subsp. jejuni NW]
Length = 224
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 60/87 (68%), Gaps = 3/87 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+LE+ + Y F+DK+ L+ AL+H ++ + + + +RLEFLGDA++D +V YL+ F+
Sbjct: 6 KLEQSLTYEFKDKNLLIHALTHKSF---KKSYNNERLEFLGDAVLDLVVGEYLFHKFAKD 62
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDL 201
+ G++S +R+A+VN +FA A L+L
Sbjct: 63 AEGDLSKLRAALVNEKSFAKIANSLNL 89
>gi|51473232|ref|YP_066989.1| ribonuclease III [Rickettsia typhi str. Wilmington]
gi|383752006|ref|YP_005427106.1| ribonuclease III [Rickettsia typhi str. TH1527]
gi|383842841|ref|YP_005423344.1| ribonuclease III [Rickettsia typhi str. B9991CWPP]
gi|81390308|sp|Q68XY5.1|RNC_RICTY RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|51459544|gb|AAU03507.1| RNase D [Rickettsia typhi str. Wilmington]
gi|380758649|gb|AFE53884.1| ribonuclease III [Rickettsia typhi str. TH1527]
gi|380759488|gb|AFE54722.1| ribonuclease III [Rickettsia typhi str. B9991CWPP]
Length = 227
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 66/116 (56%), Gaps = 13/116 (11%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPT---YNANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+LE + Y+F++K L++ALSHP+ Y+ + Y+RLEFLGDA+++ L+T L++NF
Sbjct: 6 KLETLLGYSFKNKELLIEALSHPSLRQYHEYKYDKDYERLEFLGDAVLNLLITEILFKNF 65
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL----------HDSPRLYENVT 217
+ G ++ IRS +V T +L L +++ D+P ENVT
Sbjct: 66 ENYKEGNLAKIRSYLVCKETICIVGTKLALKDYIIMTHGEEVAGGRDNPNNIENVT 121
>gi|121807816|sp|Q2VF18.1|DCL2_CRYPA RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease DCL-2; Includes: RecName:
Full=ATP-dependent helicase DCL-2
gi|77632776|gb|ABB00357.1| dicer-like protein 2 [Cryphonectria parasitica]
Length = 1451
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 81/153 (52%), Gaps = 19/153 (12%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM----LFLQALNILPQSKIDVHEALYGP-HPSAV 95
L K +ADVVE+L GV G+ A+ LF+ P S +V + L+G P +
Sbjct: 1090 LSPKTLADVVEALIGVSFVDGGLPKALECIRLFIPESQPRPFS--EVRDILFGAAEPKGM 1147
Query: 96 RCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLG 155
+ P + LE+ I Y+F +K+ L++A++HP+YN + Y RLEF+G
Sbjct: 1148 KLPA------------DLQLLEQLIEYSFCEKALLVEAVTHPSYNVSGTVACYDRLEFIG 1195
Query: 156 DAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
DAI+D+++ ++ L ++ +R+A+VN
Sbjct: 1196 DAILDYIIVEEVFALEPALENWQMHLLRTALVN 1228
Score = 39.7 bits (91), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S L++A+ + R +Y+R+EFLGD+I+ +T L HL G +S ++ +V
Sbjct: 985 SMLVEAICA---KSARTPENYERIEFLGDSILKTCITVNLAATKLHLPEGILSLMKDRLV 1041
Query: 188 NNVTFASYAVRLDLHKHLL 206
+N A +L + L+
Sbjct: 1042 SNARLCRAACDAELDQFLV 1060
>gi|302694007|ref|XP_003036682.1| hypothetical protein SCHCODRAFT_102832 [Schizophyllum commune H4-8]
gi|300110379|gb|EFJ01780.1| hypothetical protein SCHCODRAFT_102832, partial [Schizophyllum
commune H4-8]
Length = 1489
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 94/200 (47%), Gaps = 8/200 (4%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L DK +ADVVE++ G S G +G + +AL + D+ + + S P
Sbjct: 1146 LSDKALADVVEAILGAAHLSAGRDGGLQVAKALGLPVAKNADIWDD-FKAQVSMHATPSA 1204
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
L P ++ I L AL+H N + +Y+R+EFLGDA++D
Sbjct: 1205 VSFLRP----GTIDGVQSVIGQKLNKPELLALALTH--ANNSSPLGNYERIEFLGDALLD 1258
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENV-TRF 219
F V Y+Y ++ P ++ ++SAMV N A+ L++HL S ++ +++ T
Sbjct: 1259 FQVVEYVYRKYTQQPPSVLTLLKSAMVGNSPLAAICAESGLYRHLHQKSHQIQQSINTYL 1318
Query: 220 AQNQEARNHEISDEEEEEEE 239
Q+A+ E + +++ E
Sbjct: 1319 TALQKAKQKEYAAADDDLRE 1338
>gi|167751472|ref|ZP_02423599.1| hypothetical protein EUBSIR_02468 [Eubacterium siraeum DSM 15702]
gi|167655280|gb|EDR99409.1| ribonuclease III [Eubacterium siraeum DSM 15702]
gi|291557094|emb|CBL34211.1| RNAse III [Eubacterium siraeum V10Sc8a]
Length = 226
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 62/93 (66%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
T+LE+ I YTF++ L +AL+H +Y + S +RLEFLGD+++ +V+ +L+EN ++
Sbjct: 2 TELEQIIGYTFKNPELLKEALTHSSYTNGKHLRSNERLEFLGDSVLSIVVSEHLFENLTN 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
L G+++ IR+++V +A ++DL K++
Sbjct: 62 LPEGQLTKIRASVVCENALYPFARKIDLGKYIF 94
>gi|307448396|pdb|3O2R|B Chain B, Structural Flexibility In Region Involved In Dimer
Formation Of Nuclease Domain Of Ribonuclase Iii (Rnc)
From Campylobacter Jejuni
gi|307448398|pdb|3O2R|D Chain D, Structural Flexibility In Region Involved In Dimer
Formation Of Nuclease Domain Of Ribonuclase Iii (Rnc)
From Campylobacter Jejuni
Length = 144
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 62/92 (67%), Gaps = 2/92 (2%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+LE+ + Y F+DK+ L+ AL+H ++ + + + +RLEFLGDA++D +V YL+ F+
Sbjct: 4 KLEQSLTYEFKDKNLLIHALTHKSFX--KKSYNNERLEFLGDAVLDLVVGEYLFHKFAKD 61
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ G++S +R+A+VN +FA A L+L +L
Sbjct: 62 AEGDLSKLRAALVNEKSFAKIANSLNLGDFIL 93
>gi|291530279|emb|CBK95864.1| RNAse III [Eubacterium siraeum 70/3]
Length = 226
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 62/93 (66%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
T+LE+ I YTF++ L +AL+H +Y + S +RLEFLGD+++ +V+ +L+EN ++
Sbjct: 2 TELEQIIGYTFKNPELLKEALTHSSYTNGKHLRSNERLEFLGDSVLSIVVSEHLFENLTN 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
L G+++ IR+++V +A ++DL K++
Sbjct: 62 LPEGQLTKIRASVVCENALYPFARKIDLGKYIF 94
>gi|403419584|emb|CCM06284.1| predicted protein [Fibroporia radiculosa]
Length = 1482
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 61/189 (32%), Positives = 90/189 (47%), Gaps = 26/189 (13%)
Query: 18 DGKKVSSPEKLPSSSYNFLDRIK-----LGDKVVADVVESLTGVYLRSCGIEGAMLFLQA 72
D + VS+ E +P LD K L KV+ADVVESL G G + A+
Sbjct: 1098 DVQNVSTEETIP------LDDKKKKTQALSTKVLADVVESLIGAAYEHGGFDLAVDCTSI 1151
Query: 73 LNI-LPQSKIDVH-EALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFL 130
+ L KI VH E + P P+ +E+ I Y F K+ L
Sbjct: 1152 FGMGLTWKKIPVHIENILAITEELENPP------------PQLALVERMIGYQFSRKALL 1199
Query: 131 LQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYEN-FSHLSPGEISDIRSAMVNN 189
+QAL+H +Y+ + + SY+RLEFLGD+ +D +VT +LY + PG + + A+VN+
Sbjct: 1200 VQALTHASYHGDTASMSYERLEFLGDSALDMIVTDFLYHAPGKNYKPGHMHIRKEALVNS 1259
Query: 190 VTFASYAVR 198
A +R
Sbjct: 1260 HFLAFICLR 1268
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 5/88 (5%)
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
S L A++ P ++ ++YQRLE LGD ++ ++ T L+ + G ++ + V
Sbjct: 1005 SLLTTAVTAPV---SQELSNYQRLETLGDTVLKYVTTIQLFADHPLWHEGYLARRKDHAV 1061
Query: 188 NNVTFASYAVRLDLHKHLLHDS--PRLY 213
+N+ A A+ L++ ++ D PR +
Sbjct: 1062 SNIQLAKQAISKRLYQWIIRDRFVPRKW 1089
>gi|238926905|ref|ZP_04658665.1| ribonuclease III [Selenomonas flueggei ATCC 43531]
gi|238885139|gb|EEQ48777.1| ribonuclease III [Selenomonas flueggei ATCC 43531]
Length = 238
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 111 PECTQLEKRINYTFQDKSFLLQALSHPTY--NANRITTSYQRLEFLGDAIIDFLVTAYLY 168
E +L ++ F D S L +AL+HP+Y A T +RLEFLGDA+++ ++ YLY
Sbjct: 11 AELVRLSAFLDVDFADLSLLEEALTHPSYVNEARERATHNERLEFLGDAVLELAISTYLY 70
Query: 169 ENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
+ H S GE++ +R+++V + T A A RL L HL
Sbjct: 71 VAYPHCSEGELTKMRASLVQSETLARLARRLHLGAHL 107
>gi|156740401|ref|YP_001430530.1| ribonuclease III [Roseiflexus castenholzii DSM 13941]
gi|254807896|sp|A7NGC5.1|RNC_ROSCS RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|156231729|gb|ABU56512.1| Ribonuclease III [Roseiflexus castenholzii DSM 13941]
Length = 234
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITT-----SYQRLEFLGDAIIDFLVTAYLYE 169
+L R++ TF D+ L QAL+H ++ R+ S +RLEFLGDAI++FL T ++E
Sbjct: 7 ELCARLDVTFSDQRLLWQALTHRSFLNERVDERLSLFSNERLEFLGDAIVNFLATTLVFE 66
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
F G ++ R+A++ T AS+A R DL H L
Sbjct: 67 RFPDAGEGYLTAWRAALIRTETLASFARRYDLGSHTL 103
>gi|416120344|ref|ZP_11594983.1| Ribonuclease III [Campylobacter concisus UNSWCD]
gi|384576845|gb|EIF06166.1| Ribonuclease III [Campylobacter concisus UNSWCD]
Length = 223
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 60/91 (65%), Gaps = 3/91 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+ E+ + Y F+ L +AL+H + + + +RLEFLGDA++D LV YL++ FS +
Sbjct: 6 EFERNLGYKFKKSELLEEALTHKS---TKQALNNERLEFLGDAVMDLLVAEYLFKKFSKI 62
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
+ G++S +R+A+VN +FA+ + RL++ + L
Sbjct: 63 AEGDMSKLRAALVNEKSFANMSRRLNMGEFL 93
>gi|251765118|sp|Q6ATG6.2|RTL2_ORYSJ RecName: Full=Ribonuclease 3-like protein 2; AltName:
Full=Ribonuclease III-like protein 2; Short=RNase
III-like protein 2
Length = 317
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 42/204 (20%)
Query: 92 PSAVRCPEQARGL---DPLRYIP---------ECTQLEKRINYTFQDKSFLLQALSHPTY 139
P A++ + RG DP+ P ++E+ + Y F+D L +AL+H ++
Sbjct: 4 PPAMKPASRKRGPPAPDPVELPPPGFVADRAEAAARVERLLRYQFRDGRLLEEALTHQSF 63
Query: 140 NANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRL 199
+ + SYQRLEF+GD+ + + +LY L PG +S +R+A ++ A AVR
Sbjct: 64 ADDAV--SYQRLEFVGDSALGLAFSNFLYLTNPTLGPGPLSTLRAANISTEKLARVAVRH 121
Query: 200 DLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQT 259
DL+ L + PRL V +F I ++E E+ D+ T
Sbjct: 122 DLYPLLRRNCPRLDLLVGQF----------IETVKQEPED----------------DLST 155
Query: 260 DVYGRVVEYVDVPKALGDVFEALV 283
YG V V PK L D+ EA+
Sbjct: 156 VPYGGSV--VKAPKVLADIVEAIA 177
>gi|326533632|dbj|BAK05347.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 381
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 29/172 (16%)
Query: 113 CTQLEKRINYTFQDKSFLLQALSHPTYNANRI-TTSYQRLEFLGDAIIDFLVTAYLYENF 171
++E+ + Y F+D+S L +AL+H +++ SYQRLEF+GDA + + +LY
Sbjct: 43 AARVERLLQYRFRDRSLLDEALTHQSFSGGAGGAASYQRLEFVGDAALGLAFSNFLYLTN 102
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEIS 231
+ PG +S +R+A ++ A AVR DL+ L + PRL V +F I
Sbjct: 103 PTVGPGALSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQF----------IE 152
Query: 232 DEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
++E E++ GI YG V PK L D+ EA+
Sbjct: 153 SVKQELEDDLGIT----------------PYGGSV--FKAPKVLADIVEAIA 186
>gi|315638039|ref|ZP_07893224.1| ribonuclease III [Campylobacter upsaliensis JV21]
gi|315481887|gb|EFU72506.1| ribonuclease III [Campylobacter upsaliensis JV21]
Length = 224
Score = 73.9 bits (180), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE ++NY F+D+ L+ AL+H + N + +RLEFLGDA++D +V +L+ F + +
Sbjct: 7 LEAKLNYKFKDQKLLIYALTHKSAKKN---YNNERLEFLGDAVLDLVVGEFLFHKFKNEA 63
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDL 201
G++S +R+A+VN +FA A L+L
Sbjct: 64 EGDLSKLRAALVNEKSFAKIATSLNL 89
>gi|423074940|ref|ZP_17063660.1| ribonuclease III [Desulfitobacterium hafniense DP7]
gi|361854146|gb|EHL06251.1| ribonuclease III [Desulfitobacterium hafniense DP7]
Length = 262
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 105 DPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDF 161
D L+ IP L KR+ AL+HP+Y N + QRLEFLGDAI+DF
Sbjct: 27 DTLQRIPTGIGLAKRLELDESPNRLFTTALTHPSYLFENPQSGLENNQRLEFLGDAILDF 86
Query: 162 LVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+V YLY ++ GE++ +R+A+VN T A A ++ L + LL
Sbjct: 87 VVAEYLYLSYPERPEGELTKMRAAVVNESTLARTAKKIRLGEELL 131
>gi|326497771|dbj|BAK05975.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 379
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 82/172 (47%), Gaps = 29/172 (16%)
Query: 113 CTQLEKRINYTFQDKSFLLQALSHPTYNANRI-TTSYQRLEFLGDAIIDFLVTAYLYENF 171
++E+ + Y F+D+S L +AL+H +++ SYQRLEF+GDA + + +LY
Sbjct: 41 AARVERLLQYRFRDRSLLDEALTHQSFSGGAGGAASYQRLEFVGDAALGLAFSNFLYLTN 100
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEIS 231
+ PG +S +R+A ++ A AVR DL+ L + PRL V +F I
Sbjct: 101 PTVGPGALSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQF----------IE 150
Query: 232 DEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
++E E++ GI YG V PK L D+ EA+
Sbjct: 151 SVKQELEDDLGIT----------------PYGGSV--FKAPKVLADIVEAIA 184
>gi|343791208|gb|AEM61141.1| RNase III dicer-like protein [Puccinia striiformis f. sp. tritici]
Length = 1386
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 78/277 (28%), Positives = 134/277 (48%), Gaps = 46/277 (16%)
Query: 10 DLYQDP-TEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAML 68
D ++D TEDGK+ L + S++ + +V++DVVE+L G + GIE +
Sbjct: 1006 DRFRDAQTEDGKE------LANGSFSR----TIPRRVLSDVVEALLGAGFLTGGIELGLK 1055
Query: 69 FLQALNILPQSKIDVHE-ALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDK 127
AL++ + ++ L SA LDP + +C L+++I Y F+++
Sbjct: 1056 VGTALDLCFGGTVPWNQRTLNLSFESAA-----LSRLDP-SILLKCETLQQKIGYVFKEQ 1109
Query: 128 SFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMV 187
L+QAL+H + N+ +T Y+R E+LGDA+ID + + ++ F++ + E++ R+ +V
Sbjct: 1110 LLLVQALTHRSANSF-MTNCYEREEWLGDAVIDMWIVEHAFKRFANATAEELTLARARVV 1168
Query: 188 NNVTFASYAV-RLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRC 246
+N + A+ +L L + ++H S EN +Q R E I
Sbjct: 1169 SNGSLGFLAIKKLGLQEIIMHKS----ENF-----DQACR--------------EAIEAI 1205
Query: 247 LIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
F IEE + D + D PK L DV EA+V
Sbjct: 1206 EPFTKIEEFFSKMD---NLFVVFDPPKILNDVLEAIV 1239
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 9/117 (7%)
Query: 112 ECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+ T L +++N+ +QAL+ P + YQ LE +GD + + ++Y
Sbjct: 908 QATALFEQLNFPTISLLLGMQALTPPGVG---VPWDYQTLETVGDTFLKLATSVHVY--L 962
Query: 172 SHLSPGE--ISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEAR 226
SHL GE +S +RS V+N AV+ +L +L S R + R AQ ++ +
Sbjct: 963 SHLKKGEGDMSHVRSKSVDNAYLRRKAVQANLPSFIL--SQRFRTDRFRDAQTEDGK 1017
>gi|32266198|ref|NP_860230.1| ribonuclease III [Helicobacter hepaticus ATCC 51449]
gi|81666107|sp|Q7VIA9.1|RNC_HELHP RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|32262248|gb|AAP77296.1| ribonuclease III [Helicobacter hepaticus ATCC 51449]
Length = 240
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Query: 110 IPECTQL-EKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLY 168
+P+ QL EK++ Y FQ++ LL+AL+H + + + +RLEFLGDA++D LV YL+
Sbjct: 6 LPKSPQLLEKKLGYVFQNQQLLLEALTHKS---CKKQYNNERLEFLGDAVLDLLVGEYLF 62
Query: 169 ENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
+ F GE+S +R+ +VN F A LDL +L
Sbjct: 63 KKFPLAKEGELSKLRACIVNEKGFMKLAQSLDLGAYL 99
>gi|121807817|sp|Q2VF19.1|DCL1_CRYPA RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease DCL-1; Includes: RecName:
Full=ATP-dependent helicase DCL-1
gi|77632774|gb|ABB00356.1| dicer-like protein 1 [Cryphonectria parasitica]
Length = 1548
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 85/181 (46%), Gaps = 17/181 (9%)
Query: 36 LDRIKLGDKVVADVVESLTGV-YLRSCGIEGAMLFLQALNIL------PQSKIDVHEALY 88
+D +L DK +ADV E+L G Y+ + + L ++A+ L P +K D + A Y
Sbjct: 1171 MDEHRLADKSIADVCEALIGAAYMTTRKHDDYDLAVRAVTRLVNHKQHPMTKWDDYHAAY 1230
Query: 89 GPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPT--YNANRITT 146
P P A LD + I E T Y F+ L A HP+ Y +++
Sbjct: 1231 -VMPGWQTMPANAAELDMAQKIHEAT------GYQFKHPRVLRSAFRHPSRPYVFDKVP- 1282
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
YQRLEFLGDA+ D YL+ P +++ + AMV+N AV L HK +L
Sbjct: 1283 HYQRLEFLGDALFDMACVDYLFHIAPDEGPQWLTEHKMAMVSNQFLGCLAVSLGFHKFIL 1342
Query: 207 H 207
H
Sbjct: 1343 H 1343
>gi|218196456|gb|EEC78883.1| hypothetical protein OsI_19246 [Oryza sativa Indica Group]
gi|222630918|gb|EEE63050.1| hypothetical protein OsJ_17858 [Oryza sativa Japonica Group]
Length = 350
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 93/204 (45%), Gaps = 42/204 (20%)
Query: 92 PSAVRCPEQARGL---DPLRYIP---------ECTQLEKRINYTFQDKSFLLQALSHPTY 139
P A++ + RG DP+ P ++E+ + Y F+D L +AL+H ++
Sbjct: 4 PPAMKPASRKRGPPAPDPVELPPPGFVADRAEAAARVERLLRYQFRDGRLLEEALTHQSF 63
Query: 140 NANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRL 199
+ + SYQRLEF+GD+ + + +LY L PG +S +R+A ++ A AVR
Sbjct: 64 ADDAV--SYQRLEFVGDSALGLAFSNFLYLTNPTLGPGPLSTLRAANISTEKLARVAVRH 121
Query: 200 DLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQT 259
DL+ L + PRL V +F I ++E E+ D+ T
Sbjct: 122 DLYPLLRRNCPRLDLLVGQF----------IETVKQEPED----------------DLST 155
Query: 260 DVYGRVVEYVDVPKALGDVFEALV 283
YG V V PK L D+ EA+
Sbjct: 156 VPYGGSV--VKAPKVLADIVEAIA 177
>gi|89895402|ref|YP_518889.1| hypothetical protein DSY2656 [Desulfitobacterium hafniense Y51]
gi|89334850|dbj|BAE84445.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 262
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 105 DPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDF 161
D L+ IP L KR+ AL+HP+Y N + QRLEFLGDAI+DF
Sbjct: 27 DTLQRIPTGIGLAKRLELDESPNRLFTTALTHPSYLFENPQSGLENNQRLEFLGDAILDF 86
Query: 162 LVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+V YLY ++ GE++ +R+A+VN T A A ++ L + LL
Sbjct: 87 VVAEYLYLSYPERPEGELTKMRAAVVNESTLARTAKKIRLGEELL 131
>gi|125555283|gb|EAZ00889.1| hypothetical protein OsI_22916 [Oryza sativa Indica Group]
Length = 276
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 66/120 (55%), Gaps = 6/120 (5%)
Query: 106 PLRYIP-----ECTQLEKRINYTFQDKSFLLQALSHPT-YNANRITTSYQRLEFLGDAII 159
P ++P E +E + Y F+DK+ + QAL+H + Y R +Y+RLE+LGDA++
Sbjct: 27 PPGFVPPMGPGEVAAVESLLGYEFRDKALVEQALTHGSFYYPYRPGVTYERLEYLGDAVL 86
Query: 160 DFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
+V+ ++ + L PG ++ +R+A V+ A AV LH L H +P L +T F
Sbjct: 87 TCVVSREVFLTYGQLQPGPLTRLRAANVDKEKLARVAVVHGLHHFLRHKAPNLDGQITDF 146
>gi|386760965|ref|YP_006234600.1| ribonuclease III [Helicobacter cinaedi PAGU611]
gi|385145981|dbj|BAM11489.1| ribonuclease III [Helicobacter cinaedi PAGU611]
Length = 242
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 111 PECTQ-LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
P+ Q LEK + YTF+DK LL+AL+H + + + +RLEFLGDA++D LV +L+
Sbjct: 7 PKNAQALEKTLGYTFKDKKLLLEALTHKSC---KNAYNNERLEFLGDAVLDLLVGEFLFR 63
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
F GE+S +R+ +VN F A LDL
Sbjct: 64 KFPSAKEGELSKLRACIVNEKGFMKLAKSLDL 95
>gi|340960215|gb|EGS21396.1| hypothetical protein CTHT_0032530 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1596
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 89/199 (44%), Gaps = 21/199 (10%)
Query: 41 LGDKVVADVVESLTGVYL--------RSCGIEGAM-LFLQALNILPQS-----KIDVHEA 86
L DK +ADV E+L G L + +GA L ++A++ L +S
Sbjct: 1202 LADKSIADVCEALIGAALLTGQDRAGSTAPEQGAFDLAIRAVSTLVKSPRHSMSSYSEYY 1261
Query: 87 LYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRIT 145
P+ P + +D + R+ YTF+ L A HPTY +
Sbjct: 1262 SLYTPPAWQTAPCSSAQVD------MAARFACRLGYTFRHPRLLRSAFQHPTYPSVYEHL 1315
Query: 146 TSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
SYQRLEFLGDA++D + +L+ F P +++ + AMV+N L HK++
Sbjct: 1316 PSYQRLEFLGDALLDMAIVEWLFARFPGADPQWLTEHKMAMVSNQFLGCLGFMLGFHKNI 1375
Query: 206 LHDSPRLYENVTRFAQNQE 224
SP++ +++ R+ E
Sbjct: 1376 ACCSPQVGKDLARYVAEME 1394
>gi|393201759|ref|YP_006463601.1| dsRNA-specific ribonuclease [Solibacillus silvestris StLB046]
gi|406664636|ref|ZP_11072411.1| Ribonuclease 3 [Bacillus isronensis B3W22]
gi|327441090|dbj|BAK17455.1| dsRNA-specific ribonuclease [Solibacillus silvestris StLB046]
gi|405387484|gb|EKB46908.1| Ribonuclease 3 [Bacillus isronensis B3W22]
Length = 253
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGD 156
Q G+ P + + LE +N FQ+K L QA +H +Y + ++ T +RLEFLGD
Sbjct: 10 QKPGVLPEKVKSQFEILENEMNIHFQNKDLLYQAFTHSSYVNEHRRKLFTDNERLEFLGD 69
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
A+++ V+ YL+E F H+S GE++ +R+++V + +A L+ + +L
Sbjct: 70 AVLELSVSKYLFEKFPHMSEGELTKLRASIVCEPSLVVFANELNFGQFVL 119
>gi|294463153|gb|ADE77113.1| unknown [Picea sitchensis]
Length = 173
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 69/111 (62%), Gaps = 3/111 (2%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
++LE + Y F+ KS L +A++H ++N T SY++LEF+GD+++ +LVT +LY +
Sbjct: 20 SELEDILKYKFKSKSLLKEAITH---SSNNNTESYEKLEFVGDSVLGYLVTKHLYCAYPK 76
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQE 224
L G ++ +RS V+ FA V+ H++LL ++P L + + F ++ E
Sbjct: 77 LYQGTLTLLRSRNVDTEKFARVCVKHKFHQYLLLNAPALQQIIEDFVKDIE 127
>gi|440632076|gb|ELR01995.1| hypothetical protein GMDG_05164 [Geomyces destructans 20631-21]
Length = 1634
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 103/234 (44%), Gaps = 37/234 (15%)
Query: 17 EDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNIL 76
+ GK +P+K KLGDK +ADV E+L G A+L + +
Sbjct: 1217 KKGKAAQAPKKH-----------KLGDKTIADVSEALIG---------AALLTPSNGHAM 1256
Query: 77 PQSKIDVHEALYGPHPSAVRCPEQARGLDPLRY-IPECT--------QLEKRINYTFQDK 127
+ V E +Y + + + +G +Y I T Q+E NY F
Sbjct: 1257 DHAVRAVTELVYSTDHAIEKWEDYFKGYTKPKYQIAASTASQRNVAEQIEITHNYHFHYP 1316
Query: 128 SFLLQALSHPTYN-ANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAM 186
L A +HP+Y A +YQRLEFLGD+++D +L+ F P +++ + AM
Sbjct: 1317 RLLRSAFTHPSYPFAYERVPNYQRLEFLGDSLLDMACVNFLFHRFPTKDPQWLTEHKMAM 1376
Query: 187 VNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEE 240
V+N + V L H LL +P + ++T + EI++ E+ E++
Sbjct: 1377 VSNQFLGAVCVALGFHTQLLQFNPIIQGSITEYV-------CEITEAREQAEQD 1423
>gi|187735104|ref|YP_001877216.1| Ribonuclease III [Akkermansia muciniphila ATCC BAA-835]
gi|187425156|gb|ACD04435.1| Ribonuclease III [Akkermansia muciniphila ATCC BAA-835]
Length = 231
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 54/93 (58%), Gaps = 1/93 (1%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITT-SYQRLEFLGDAIIDFLVTAYLYENFS 172
T LE ++ Y F + L+QAL+HP+ ++ T +Y+RLEFLGDAI+ VT YLY +
Sbjct: 4 TALEDKLGYRFNNPDLLVQALTHPSTDSKPETRRAYERLEFLGDAILQLAVTQYLYHHMP 63
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
GE++ +R+ V+ Y L L KH+
Sbjct: 64 QSPEGELTQLRARTVSRANLGKYGFILGLDKHI 96
>gi|419589670|ref|ZP_14125455.1| ribonuclease III [Campylobacter coli 317/04]
gi|380566873|gb|EIA89433.1| ribonuclease III [Campylobacter coli 317/04]
Length = 224
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 58/86 (67%), Gaps = 3/86 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE+++ Y F+DK L+ AL+H ++ + + +RLEFLGDA++D +V YL+ F+ +
Sbjct: 7 LEQKLAYKFKDKDLLIHALTHKSF---KKPYNNERLEFLGDAVLDLVVGEYLFHKFAKDA 63
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDL 201
G++S +R+A+VN +FA A L+L
Sbjct: 64 EGDLSKLRAALVNEKSFAKIANSLNL 89
>gi|410667365|ref|YP_006919736.1| ribonuclease 3 [Thermacetogenium phaeum DSM 12270]
gi|409105112|gb|AFV11237.1| ribonuclease 3 [Thermacetogenium phaeum DSM 12270]
Length = 235
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Query: 111 PECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSY--QRLEFLGDAIIDFLVTAYLY 168
P+ +L+K+IN F + L AL+HP+Y + QRLEFLGDAI+ +V YLY
Sbjct: 3 PDLDELQKKINVFFSEPRLLETALTHPSYMVEHAEVEHHNQRLEFLGDAILGSVVAYYLY 62
Query: 169 ENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
E+F G ++ R+A+V + A+ A +L+L K+L
Sbjct: 63 EHFPKFGEGHLTKTRAAVVCEPSLAAVARKLELGKYL 99
>gi|309789990|ref|ZP_07684566.1| ribonuclease III [Oscillochloris trichoides DG-6]
gi|308228010|gb|EFO81662.1| ribonuclease III [Oscillochloris trichoides DG6]
Length = 235
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 58/96 (60%), Gaps = 5/96 (5%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTY-----NANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+L++++ F D+ +A H ++ NR S +RLEFLGDA+++FL A+LY
Sbjct: 3 ELQRQLGIRFNDEELFTRAFVHRSFIHEHPERNRPRESNERLEFLGDAVLNFLSAAWLYA 62
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
NF + GE++ +R+A+V T A +A LDL +H+
Sbjct: 63 NFPDRTEGELTHLRAALVKTNTLAGFARSLDLGRHI 98
>gi|365154598|ref|ZP_09351029.1| ribonuclease 3 [Campylobacter sp. 10_1_50]
gi|363649573|gb|EHL88682.1| ribonuclease 3 [Campylobacter sp. 10_1_50]
Length = 223
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+ E+ + Y F+ L +AL+H + + + +RLEFLGDA++D LV YL++ FS +
Sbjct: 6 EFERNLGYKFKQSELLEEALTHKS---TKQALNNERLEFLGDAVMDLLVAEYLFKKFSKI 62
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
+ G++S +R+A+VN +FA+ + RL + + L
Sbjct: 63 AEGDMSKLRAALVNEKSFANMSRRLKMGEFL 93
>gi|29840106|ref|NP_829212.1| ribonuclease III [Chlamydophila caviae GPIC]
gi|33301541|sp|Q823R4.1|RNC_CHLCV RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|29834454|gb|AAP05090.1| ribonuclease III [Chlamydophila caviae GPIC]
Length = 237
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTS--YQRLEFLGDAIIDFLVTAYLYENFS 172
++E ++N+TF L+ AL+HP+Y +T + +RLEFLGDA++ +VT +L+ F
Sbjct: 9 EVEAKLNFTFTQPKLLVTALTHPSYRNETVTITEDSERLEFLGDAVLCLIVTEHLFLLFP 68
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ G +S R+A++N V+ Y L L +HLL
Sbjct: 69 SMDEGTLSTARAALINAVSCCQYTDALGLGEHLL 102
>gi|197119571|ref|YP_002139998.1| ribonuclease III [Geobacter bemidjiensis Bem]
gi|197088931|gb|ACH40202.1| ribonuclease III [Geobacter bemidjiensis Bem]
Length = 232
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 105 DPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVT 164
DPL I E R+ Y F D+ L++AL+H TY QRLEF GDA++DFL++
Sbjct: 7 DPLEGI------EGRLGYRFSDRGLLVEALTHRTYVNEAGGRDNQRLEFFGDAVLDFLLS 60
Query: 165 AYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
L F GE++ IR+A+V+ + A LDL + L
Sbjct: 61 DMLLVRFPDSREGELTRIRAALVDEASLGKIASELDLGQAL 101
>gi|57168805|ref|ZP_00367936.1| ribonuclease III Cj1635c [Campylobacter coli RM2228]
gi|419537870|ref|ZP_14077235.1| ribonuclease III [Campylobacter coli 90-3]
gi|419540283|ref|ZP_14079521.1| ribonuclease III [Campylobacter coli Z163]
gi|419544520|ref|ZP_14083476.1| ribonuclease III [Campylobacter coli 2553]
gi|419546878|ref|ZP_14085623.1| ribonuclease III [Campylobacter coli 2680]
gi|419549476|ref|ZP_14088066.1| ribonuclease III [Campylobacter coli 2685]
gi|419553184|ref|ZP_14091447.1| ribonuclease III [Campylobacter coli 2692]
gi|419555536|ref|ZP_14093549.1| ribonuclease III [Campylobacter coli 84-2]
gi|419557967|ref|ZP_14095857.1| ribonuclease III [Campylobacter coli 80352]
gi|419560500|ref|ZP_14098141.1| ribonuclease III [Campylobacter coli 86119]
gi|419562240|ref|ZP_14099759.1| ribonuclease III [Campylobacter coli 1091]
gi|419565239|ref|ZP_14102588.1| ribonuclease III [Campylobacter coli 1098]
gi|419566594|ref|ZP_14103848.1| ribonuclease III [Campylobacter coli 1148]
gi|419569978|ref|ZP_14107033.1| ribonuclease III [Campylobacter coli 7--1]
gi|419571931|ref|ZP_14108869.1| ribonuclease III [Campylobacter coli 132-6]
gi|419574263|ref|ZP_14111024.1| ribonuclease III [Campylobacter coli 1891]
gi|419575098|ref|ZP_14111795.1| ribonuclease III [Campylobacter coli 1909]
gi|419577226|ref|ZP_14113783.1| ribonuclease III [Campylobacter coli 59-2]
gi|419579706|ref|ZP_14116108.1| ribonuclease III [Campylobacter coli 1948]
gi|419581745|ref|ZP_14118035.1| ribonuclease III [Campylobacter coli 1957]
gi|419591030|ref|ZP_14126389.1| ribonuclease III [Campylobacter coli 37/05]
gi|419592712|ref|ZP_14127956.1| ribonuclease III [Campylobacter coli LMG 9854]
gi|419595070|ref|ZP_14130184.1| ribonuclease III [Campylobacter coli LMG 23336]
gi|419596512|ref|ZP_14131515.1| ribonuclease III [Campylobacter coli LMG 23341]
gi|419599217|ref|ZP_14134083.1| ribonuclease III [Campylobacter coli LMG 23342]
gi|419600989|ref|ZP_14135725.1| ribonuclease III [Campylobacter coli LMG 23344]
gi|419602764|ref|ZP_14137338.1| ribonuclease III [Campylobacter coli 151-9]
gi|419604007|ref|ZP_14138482.1| ribonuclease III [Campylobacter coli LMG 9853]
gi|419606995|ref|ZP_14141345.1| ribonuclease III [Campylobacter coli LMG 9860]
gi|419608702|ref|ZP_14142887.1| ribonuclease III [Campylobacter coli H6]
gi|419611039|ref|ZP_14145088.1| ribonuclease III [Campylobacter coli H8]
gi|419612541|ref|ZP_14146417.1| ribonuclease III [Campylobacter coli H9]
gi|419614811|ref|ZP_14148580.1| ribonuclease III [Campylobacter coli H56]
gi|419617063|ref|ZP_14150694.1| ribonuclease III [Campylobacter coli Z156]
gi|57019852|gb|EAL56535.1| ribonuclease III Cj1635c [Campylobacter coli RM2228]
gi|380517237|gb|EIA43356.1| ribonuclease III [Campylobacter coli Z163]
gi|380519417|gb|EIA45495.1| ribonuclease III [Campylobacter coli 90-3]
gi|380521629|gb|EIA47349.1| ribonuclease III [Campylobacter coli 2680]
gi|380525099|gb|EIA50654.1| ribonuclease III [Campylobacter coli 2553]
gi|380525687|gb|EIA51192.1| ribonuclease III [Campylobacter coli 2685]
gi|380529448|gb|EIA54604.1| ribonuclease III [Campylobacter coli 2692]
gi|380535994|gb|EIA60660.1| ribonuclease III [Campylobacter coli 84-2]
gi|380536990|gb|EIA61575.1| ribonuclease III [Campylobacter coli 86119]
gi|380540084|gb|EIA64409.1| ribonuclease III [Campylobacter coli 1098]
gi|380540610|gb|EIA64910.1| ribonuclease III [Campylobacter coli 80352]
gi|380541447|gb|EIA65709.1| ribonuclease III [Campylobacter coli 1091]
gi|380545945|gb|EIA69908.1| ribonuclease III [Campylobacter coli 1148]
gi|380548527|gb|EIA72429.1| ribonuclease III [Campylobacter coli 7--1]
gi|380549901|gb|EIA73629.1| ribonuclease III [Campylobacter coli 1891]
gi|380552684|gb|EIA76239.1| ribonuclease III [Campylobacter coli 132-6]
gi|380554296|gb|EIA77773.1| ribonuclease III [Campylobacter coli 1909]
gi|380556681|gb|EIA79925.1| ribonuclease III [Campylobacter coli 1948]
gi|380557699|gb|EIA80902.1| ribonuclease III [Campylobacter coli 59-2]
gi|380558478|gb|EIA81656.1| ribonuclease III [Campylobacter coli 1957]
gi|380569220|gb|EIA91667.1| ribonuclease III [Campylobacter coli 37/05]
gi|380571779|gb|EIA94137.1| ribonuclease III [Campylobacter coli LMG 9854]
gi|380574438|gb|EIA96541.1| ribonuclease III [Campylobacter coli LMG 23336]
gi|380575832|gb|EIA97900.1| ribonuclease III [Campylobacter coli LMG 23342]
gi|380575953|gb|EIA98015.1| ribonuclease III [Campylobacter coli LMG 23341]
gi|380580494|gb|EIB02242.1| ribonuclease III [Campylobacter coli 151-9]
gi|380580987|gb|EIB02719.1| ribonuclease III [Campylobacter coli LMG 9853]
gi|380582338|gb|EIB04002.1| ribonuclease III [Campylobacter coli LMG 23344]
gi|380585061|gb|EIB06434.1| ribonuclease III [Campylobacter coli H6]
gi|380586154|gb|EIB07466.1| ribonuclease III [Campylobacter coli LMG 9860]
gi|380588981|gb|EIB10066.1| ribonuclease III [Campylobacter coli H8]
gi|380590213|gb|EIB11238.1| ribonuclease III [Campylobacter coli H9]
gi|380592232|gb|EIB13144.1| ribonuclease III [Campylobacter coli H56]
gi|380594164|gb|EIB14970.1| ribonuclease III [Campylobacter coli Z156]
Length = 224
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 58/86 (67%), Gaps = 3/86 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE+++ Y F+DK L+ AL+H ++ + + +RLEFLGDA++D +V YL+ F+ +
Sbjct: 7 LEQKLAYKFKDKDLLIHALTHKSF---KKPYNNERLEFLGDAVLDLVVGEYLFHKFAKDA 63
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDL 201
G++S +R+A+VN +FA A L+L
Sbjct: 64 EGDLSKLRAALVNEKSFAKIANSLNL 89
>gi|305432452|ref|ZP_07401614.1| ribonuclease III [Campylobacter coli JV20]
gi|304444491|gb|EFM37142.1| ribonuclease III [Campylobacter coli JV20]
Length = 225
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 58/86 (67%), Gaps = 3/86 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE+++ Y F+DK L+ AL+H ++ + + +RLEFLGDA++D +V YL+ F+ +
Sbjct: 8 LEQKLAYKFKDKDLLIHALTHKSF---KKPYNNERLEFLGDAVLDLVVGEYLFHKFAKDA 64
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDL 201
G++S +R+A+VN +FA A L+L
Sbjct: 65 EGDLSKLRAALVNEKSFAKIANSLNL 90
>gi|419585204|ref|ZP_14121265.1| ribonuclease III [Campylobacter coli 202/04]
gi|380562621|gb|EIA85477.1| ribonuclease III [Campylobacter coli 202/04]
Length = 224
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 58/86 (67%), Gaps = 3/86 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE+++ Y F+DK L+ AL+H ++ + + +RLEFLGDA++D +V YL+ F+ +
Sbjct: 7 LEQKLAYKFKDKDLLIHALTHKSF---KKPYNNERLEFLGDAVLDLVVGEYLFHKFAKDA 63
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDL 201
G++S +R+A+VN +FA A L+L
Sbjct: 64 EGDLSKLRAALVNEKSFAKIANSLNL 89
>gi|419537205|ref|ZP_14076664.1| ribonuclease III [Campylobacter coli 111-3]
gi|419568861|ref|ZP_14105990.1| ribonuclease III [Campylobacter coli 1417]
gi|419583483|ref|ZP_14119664.1| ribonuclease III [Campylobacter coli 1961]
gi|419587626|ref|ZP_14123539.1| ribonuclease III [Campylobacter coli 67-8]
gi|380515558|gb|EIA41717.1| ribonuclease III [Campylobacter coli 111-3]
gi|380544843|gb|EIA68849.1| ribonuclease III [Campylobacter coli 1417]
gi|380563074|gb|EIA85920.1| ribonuclease III [Campylobacter coli 1961]
gi|380563757|gb|EIA86585.1| ribonuclease III [Campylobacter coli 67-8]
Length = 224
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 58/86 (67%), Gaps = 3/86 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE+++ Y F+DK L+ AL+H ++ + + +RLEFLGDA++D +V YL+ F+ +
Sbjct: 7 LEQKLAYKFKDKDLLIHALTHKSF---KKPYNNERLEFLGDAVLDLVVGEYLFHKFAKDA 63
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDL 201
G++S +R+A+VN +FA A L+L
Sbjct: 64 EGDLSKLRAALVNEKSFAKIANSLNL 89
>gi|156044530|ref|XP_001588821.1| hypothetical protein SS1G_10369 [Sclerotinia sclerotiorum 1980]
gi|154694757|gb|EDN94495.1| hypothetical protein SS1G_10369 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1515
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 88/170 (51%), Gaps = 20/170 (11%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAM----LFLQALNILPQSKIDVHEALYGPHPSAV 95
++ KV++DVVE+L G + GI A+ LF LN LP + +LY +
Sbjct: 1119 QMSSKVLSDVVEALIGACMVDGGIPKALKSLQLFFPELNWLPLETRQM--SLYQLAADDL 1176
Query: 96 RCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLG 155
P L P+ E+ + YTF KS L++A++HP+Y T S +RLEFLG
Sbjct: 1177 HLP---IALQPI---------EQILAYTFTKKSLLVEAMTHPSYING--TQSLERLEFLG 1222
Query: 156 DAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
DAI+D ++ ++ + LS ++ +RSA+VN A + + + +++
Sbjct: 1223 DAILDNIIVTAMWSYETELSHFQMHLLRSALVNADFLAFLCMEMSIEQYV 1272
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 124 FQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIR 183
D+ + A++H +Y+ +T++YQRLEFLGD+I+ + L + G +S ++
Sbjct: 1013 ISDRGLVQTAITHASYS---LTSNYQRLEFLGDSILKLCTSVQLISEYPLWPEGYLSAMK 1069
Query: 184 SAMVNNVTFASYAVRLDLHKHLL 206
+V+N + AV L L ++++
Sbjct: 1070 DRIVSNSRSSRAAVELGLDEYII 1092
>gi|325185579|emb|CCA20062.1| Dicerlike 1 (DCL1) putative [Albugo laibachii Nc14]
Length = 1609
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 90/188 (47%), Gaps = 19/188 (10%)
Query: 29 PSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI-LPQSKIDVHEAL 87
PS I K +ADV+E++ G Y+ G +GA FL + I + + +
Sbjct: 1287 PSCMGKTPQSINAPSKWIADVLEAICGAYIIGHGEKGARYFLNWVGIHVLDDSFEFSKRF 1346
Query: 88 YGPHPSAVRCPEQARGLDPLRY--------IPECTQLEKRINYTFQDKSFLLQALSHPTY 139
Y PE + + ++ + + LE+R+ Y F++K LL+A++HP+
Sbjct: 1347 YPDCYPKTLFPEAFKHVGKWKFSILHHETLVKKMRLLEQRLCYRFRNKLLLLEAITHPSV 1406
Query: 140 --------NANRITT--SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
N R++ +Y+RLE+LGDA+I++L +Y + PG +S+ ++A V+N
Sbjct: 1407 RRLEIVMDNEKRVSWQGNYERLEYLGDALIEYLTVSYAFLAHDTWLPGSLSNWKAATVSN 1466
Query: 190 VTFASYAV 197
A+
Sbjct: 1467 DALGKTAI 1474
>gi|358370394|dbj|GAA87005.1| dicer-like protein 2-1 [Aspergillus kawachii IFO 4308]
Length = 1396
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 78/161 (48%), Gaps = 10/161 (6%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+ KV+ADVVE+L G G A + LP+ ++ + PS PE
Sbjct: 1034 MSTKVLADVVEALIGASYIDGGFAAAHACIH--RFLPEVNLEHIDRTTTTAPST---PEG 1088
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
++ L I YTF KS L+++L+HP+ + T SYQRLEFLGDA++D
Sbjct: 1089 T-----TKHTLNDDHLMTHIGYTFTHKSLLVESLTHPSCQFDTTTQSYQRLEFLGDAVLD 1143
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
+ + L + + G+++ I+ A+VN A + + L
Sbjct: 1144 MAIMSTLLSHPHEIPQGQMTKIKHAVVNANLLAFFCMEFAL 1184
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 124 FQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIR 183
F ++ A++ P+ + T+YQR EF GD+++ F V+ L+ + G +S R
Sbjct: 928 FSSIRHVITAITAPSAQS---LTNYQRYEFFGDSVLKFTVSCQLFFQHPNWHEGYLSQGR 984
Query: 184 SAMVNNVTFASYAVRLDLHKHLLHD--SPRLY 213
+V N A A+ L +++ +PR +
Sbjct: 985 DEIVQNSRLARAALDAGLDAFIMNKMFTPRKW 1016
>gi|219669830|ref|YP_002460265.1| ribonuclease III [Desulfitobacterium hafniense DCB-2]
gi|219540090|gb|ACL21829.1| Ribonuclease III [Desulfitobacterium hafniense DCB-2]
Length = 262
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 105 DPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDF 161
D L+ IP L KR+ AL+HP+Y N + QRLEFLGDAI+DF
Sbjct: 27 DTLQRIPTGIGLAKRLELDDPPNRLFTTALTHPSYLFENPQSGLENNQRLEFLGDAILDF 86
Query: 162 LVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+V YLY ++ GE++ +R+A+VN T A A ++ L + LL
Sbjct: 87 VVAEYLYLSYPERPEGELTKMRAAVVNESTLARTAKKIRLGEELL 131
>gi|296417821|ref|XP_002838549.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634492|emb|CAZ82740.1| unnamed protein product [Tuber melanosporum]
Length = 1490
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 87/161 (54%), Gaps = 13/161 (8%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQA--LNILPQSKIDVHEALYGPHPSAVRC 97
+L K++ADVVE+L G A+ ++A LNI +S + +L A R
Sbjct: 1041 QLSTKILADVVEALIGAAYLEGNYPKALKVIRAFGLNINWKSLEERTTSLLN---RASRY 1097
Query: 98 PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
PE ++ LE I Y F K+ LL+A++HP++ ++ + SYQR+EFLGDA
Sbjct: 1098 PEV--------HLSHLKGLESLIGYHFTHKALLLEAITHPSWESDMTSLSYQRMEFLGDA 1149
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVR 198
++D +V +L+ + +LS ++ +S++VN A ++R
Sbjct: 1150 LLDMVVVNHLFFSPRNLSHIDMHLYKSSVVNGNFLAYLSLR 1190
Score = 43.1 bits (100), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 140 NANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRL 199
++ R +T YQR EFLGD+++ FL + L + G ++ + MV N A A+
Sbjct: 944 SSARESTDYQRFEFLGDSVLKFLTSVNLLDEHPFWHEGYLTRKKEQMVANSRLARAAIDN 1003
Query: 200 DLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEE 240
L K ++ D F ++ + IS+EEE E++
Sbjct: 1004 RLAKWIITDI---------FTGSKWRPRYVISEEEEFPEKK 1035
>gi|115462923|ref|NP_001055061.1| Os05g0271300 [Oryza sativa Japonica Group]
gi|50878449|gb|AAT85223.1| hypothetical protein [Oryza sativa Japonica Group]
gi|55908895|gb|AAV67838.1| unknown protein [Oryza sativa Japonica Group]
gi|113578612|dbj|BAF16975.1| Os05g0271300 [Oryza sativa Japonica Group]
Length = 344
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 82/171 (47%), Gaps = 30/171 (17%)
Query: 113 CTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
++E+ + Y F+D L +AL+H ++ + + SYQRLEF+GD+ + + +LY
Sbjct: 31 AARVERLLRYQFRDGRLLEEALTHQSFADDAV--SYQRLEFVGDSALGLAFSNFLYLTNP 88
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISD 232
L PG +S +R+A ++ A AVR DL+ L + PRL V +F I
Sbjct: 89 TLGPGPLSTLRAANISTEKLARVAVRHDLYPLLRRNCPRLDLLVGQF----------IET 138
Query: 233 EEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
++E E+ D+ T YG V V PK L D+ EA+
Sbjct: 139 VKQEPED----------------DLSTVPYGGSV--VKAPKVLADIVEAIA 171
>gi|51892591|ref|YP_075282.1| ribonuclease III [Symbiobacterium thermophilum IAM 14863]
gi|81388984|sp|Q67PF5.1|RNC_SYMTH RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|51856280|dbj|BAD40438.1| ribonuclease III [Symbiobacterium thermophilum IAM 14863]
Length = 235
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 63/103 (61%), Gaps = 5/103 (4%)
Query: 104 LDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLGDAIIDFL 162
LDP R C + + Y F+D+S LL+AL+H TY N + + +RLEFLGD+++ +
Sbjct: 6 LDPGRR-AWCAEA---LGYEFRDESLLLEALTHTTYANEHPRARANERLEFLGDSVLGMV 61
Query: 163 VTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
+ A+LYE + L GE++ IR+A+V + A A L + +H+
Sbjct: 62 IAAHLYERYPDLPEGELTKIRAAVVCEPSLAERARVLGIGRHM 104
>gi|452124161|ref|ZP_21936745.1| ribonuclease III [Bordetella holmesii F627]
gi|452127550|ref|ZP_21940131.1| ribonuclease III [Bordetella holmesii H558]
gi|451923391|gb|EMD73532.1| ribonuclease III [Bordetella holmesii F627]
gi|451926830|gb|EMD76960.1| ribonuclease III [Bordetella holmesii H558]
Length = 251
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE R+ + F D++ L QAL+H ++ A +RLEFLGD++++F+V A L+E ++ L
Sbjct: 6 LETRLGHHFGDQALLEQALTHRSHGARH----NERLEFLGDSVLNFVVAAMLFERYAKLD 61
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G++S +R+ +V + A A RLDL +L
Sbjct: 62 EGDLSRVRANLVKQASLADIAQRLDLSLYL 91
>gi|195624966|gb|ACG34313.1| endoribonuclease Dicer [Zea mays]
Length = 329
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 69/129 (53%), Gaps = 6/129 (4%)
Query: 97 CPEQARGLDPLRYIP-----ECTQLEKRINYTFQDKSFLLQALSHPT-YNANRITTSYQR 150
P + R P +P + T +E + Y F DKS + AL+H + Y NR +Y+R
Sbjct: 27 APREQRQDGPPGEVPPMSAKDVTAIEALLGYCFIDKSLVELALTHGSFYWPNRPGDTYER 86
Query: 151 LEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSP 210
LE+LGD ++ L++ ++ + L PG ++ +R+A V+ A AV L++ L H +P
Sbjct: 87 LEYLGDGVLTCLMSREVFRTYRTLQPGPLTRLRAANVDTEKLARVAVHRGLYRFLRHKAP 146
Query: 211 RLYENVTRF 219
+L + + F
Sbjct: 147 KLQDQICFF 155
>gi|402704036|ref|ZP_10852015.1| ribonuclease III [Rickettsia helvetica C9P9]
Length = 227
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/119 (33%), Positives = 68/119 (57%), Gaps = 19/119 (15%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPT------YNANRITTSYQRLEFLGDAIIDFLVTAYLY 168
QLEK + Y+F++K L++AL+HP+ Y A++ Y+RLEFLGDA+++ ++T L+
Sbjct: 6 QLEKLLGYSFKNKELLIEALNHPSLRQHHEYKADK---DYERLEFLGDAVLNLVITEILF 62
Query: 169 ENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL----------HDSPRLYENVT 217
NF++ + G ++ IRS +V T +L L +++ D+P EN T
Sbjct: 63 RNFANYNEGNLAKIRSYLVCKETICMVGAKLTLKDYIIMTHGEEVAGGRDNPNNIENAT 121
>gi|350572010|ref|ZP_08940322.1| ribonuclease III [Neisseria wadsworthii 9715]
gi|349790888|gb|EGZ44786.1| ribonuclease III [Neisseria wadsworthii 9715]
Length = 239
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 59/92 (64%), Gaps = 4/92 (4%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+E+ + YTF+D++ L +AL+H +Y+AN + +R EF+GDAI+++ V LY+ F+ L
Sbjct: 13 HIERGLGYTFRDRTLLARALTHRSYSAN----NNERFEFVGDAILNYTVAKMLYDVFAKL 68
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
S GE+S +R+ +VN A AV L + L
Sbjct: 69 SEGELSRLRANLVNQDMLAEIAVGLKVGDGLF 100
>gi|302502160|ref|XP_003013071.1| RNA helicase/RNAse III, putative [Arthroderma benhamiae CBS 112371]
gi|291176633|gb|EFE32431.1| RNA helicase/RNAse III, putative [Arthroderma benhamiae CBS 112371]
Length = 1490
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 79/154 (51%), Gaps = 20/154 (12%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAM----LFLQALNILPQSKIDVHEALYGPHPS-A 94
KL K +ADVVESL GV + G + LFL +N LP + E LY P
Sbjct: 1143 KLSTKTLADVVESLIGVAIIDGGENKVLRCLELFLPEINWLPSG--ERIEILYDSAPDFN 1200
Query: 95 VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFL 154
CP +++E I+Y+F K+ L +LSHP+ + +T YQRLEFL
Sbjct: 1201 DDCPRDI-----------LSKIEPLIDYSFTKKALLAASLSHPSNPISGMT--YQRLEFL 1247
Query: 155 GDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
GD+I+D +VT L+ + ++ IR+A+VN
Sbjct: 1248 GDSILDNIVTRALFRCKKEIPHQDMHLIRTALVN 1281
>gi|336470988|gb|EGO59149.1| hypothetical protein NEUTE1DRAFT_60268 [Neurospora tetrasperma FGSC
2508]
gi|350292065|gb|EGZ73260.1| hypothetical protein NEUTE2DRAFT_107618 [Neurospora tetrasperma FGSC
2509]
Length = 1583
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 90/185 (48%), Gaps = 11/185 (5%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKIDVHEAL-YGPHPSAVRCP 98
L DK +ADV E+L G + +G+ L ++A+ + + K H + YG + + + P
Sbjct: 1185 LADKSIADVCEALIGAAYLTGQEKGSFDLAIKAVTAMVKDK--KHRMISYGDYYAVYQKP 1242
Query: 99 EQARGLDPLRYIPE--CTQLEKRINYTFQDKSFLLQALSHPTYNA--NRITTSYQRLEFL 154
DP + +R+ Y+F+ L A HPTY + R+ SYQRLEFL
Sbjct: 1243 NWQ--TDPANSAQRDMAKKFSERLGYSFKHPRLLRAAFQHPTYPSLYERLP-SYQRLEFL 1299
Query: 155 GDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYE 214
GDA+ D + YL+ F P +++ + AMV+N + L +K + SP + +
Sbjct: 1300 GDALFDMVAVDYLFRKFPAADPQWLTEHKMAMVSNQFLCCLSFHLGFNKCIATMSPSILK 1359
Query: 215 NVTRF 219
++ +
Sbjct: 1360 DIAEY 1364
>gi|158706443|sp|Q0CEI2.2|DCL2_ASPTN RecName: Full=Dicer-like protein 2; Includes: RecName:
Full=Endoribonuclease dcl2; Includes: RecName:
Full=ATP-dependent helicase dcl2
Length = 1377
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 25/161 (15%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQAL----NILPQSKIDVHEALYGPHPSAVR 96
L KV+ADVVESL G G A ++ L I P + VHE+ PH
Sbjct: 1035 LSSKVLADVVESLIGAAYMDGGQAKAHTCIRRLLPEIEICPITPPPVHES--APHVMN-- 1090
Query: 97 CPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGD 156
L++ + YTF +++ L++AL+HP+ ++ T SYQRLEFLGD
Sbjct: 1091 -----------------DSLKQHLGYTFVNEALLVEALTHPSCRSDASTQSYQRLEFLGD 1133
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAV 197
A++D +V + + GE++ I+ A+ N A + +
Sbjct: 1134 AVLDMVVVHAMAHHAVECPQGEMTMIKHALTNANLLAFFCM 1174
Score = 44.7 bits (104), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 124 FQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIR 183
F ++ A+S PT + T YQR EF GD+++ F V+ LY + G +S+ R
Sbjct: 929 FSSTRHVITAISAPTAQS---PTDYQRYEFFGDSVLKFTVSCQLYMQHPNWPEGYLSEGR 985
Query: 184 SAMVNNVTFASYAVRLDLHKHLLHD--SPRLY 213
+V N A A+ + L +L +PR +
Sbjct: 986 DEIVQNNRLARAALDVGLDAFILTRRFTPRKW 1017
>gi|226510363|ref|NP_001140816.1| uncharacterized protein LOC100272891 [Zea mays]
gi|194701228|gb|ACF84698.1| unknown [Zea mays]
gi|413948833|gb|AFW81482.1| hypothetical protein ZEAMMB73_371069 [Zea mays]
Length = 376
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 30/169 (17%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
++E+ + Y F D++ L +AL+H +++ + SYQRLEF+GDA + + +LY
Sbjct: 42 ARVERLLRYQFCDRALLEEALTHQSFSDGAL--SYQRLEFVGDAALGLAFSNFLYLTNPT 99
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDE 233
L PG +S +R+A ++ A AVR DL+ L PRL V +F E+ E+
Sbjct: 100 LGPGALSTLRAANISTEKLARVAVRHDLYPLLRRKCPRLDLLVGQFI---ESVKQELMH- 155
Query: 234 EEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEAL 282
D+ T YG V V PK L D+ EA+
Sbjct: 156 ----------------------DLATAPYGGSV--VKAPKVLADIVEAI 180
>gi|167040357|ref|YP_001663342.1| ribonuclease III [Thermoanaerobacter sp. X514]
gi|256750709|ref|ZP_05491594.1| ribonuclease III [Thermoanaerobacter ethanolicus CCSD1]
gi|300914441|ref|ZP_07131757.1| ribonuclease III [Thermoanaerobacter sp. X561]
gi|307724323|ref|YP_003904074.1| ribonuclease III [Thermoanaerobacter sp. X513]
gi|166854597|gb|ABY93006.1| Ribonuclease III [Thermoanaerobacter sp. X514]
gi|256750292|gb|EEU63311.1| ribonuclease III [Thermoanaerobacter ethanolicus CCSD1]
gi|300889376|gb|EFK84522.1| ribonuclease III [Thermoanaerobacter sp. X561]
gi|307581384|gb|ADN54783.1| ribonuclease III [Thermoanaerobacter sp. X513]
Length = 246
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 64/106 (60%), Gaps = 4/106 (3%)
Query: 102 RGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY--NANRITTSYQRLEFLGDAII 159
RG++ R ++LE+RINY+F+DK+ L++AL+H ++ S +RLEFLGD+++
Sbjct: 11 RGMEVKR--ENLSELEERINYSFKDKNLLIEALTHSSWAHEGKNSKISNERLEFLGDSVL 68
Query: 160 DFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
+++ YLY+N L G +S R+ +V + A A ++L L
Sbjct: 69 SLVISEYLYKNRKDLEEGSLSKYRAEIVCEPSLARCAREIELGNFL 114
>gi|255577153|ref|XP_002529460.1| ribonuclease III, putative [Ricinus communis]
gi|223531076|gb|EEF32926.1| ribonuclease III, putative [Ricinus communis]
Length = 342
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 66/107 (61%), Gaps = 3/107 (2%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
+ +EK +NYTF++K + +AL+H +Y A + +YQRLEF+GDA + ++ +++ +
Sbjct: 8 SAVEKILNYTFKNKQLVEEALTHSSYTA---SPNYQRLEFIGDAALGLALSNHVFLAYPD 64
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
L PG +S +R+A ++ A AV+ L + L H++ L + V F+
Sbjct: 65 LDPGHLSLLRAANISTEKLARVAVKHGLFRFLRHNATALDDKVKEFS 111
>gi|138894713|ref|YP_001125166.1| ribonuclease III [Geobacillus thermodenitrificans NG80-2]
gi|196247668|ref|ZP_03146370.1| Ribonuclease III [Geobacillus sp. G11MC16]
gi|189043318|sp|A4IM67.1|RNC_GEOTN RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|134266226|gb|ABO66421.1| Ribonuclease III [Geobacillus thermodenitrificans NG80-2]
gi|196212452|gb|EDY07209.1| Ribonuclease III [Geobacillus sp. G11MC16]
Length = 246
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+L+K+I TFQ++ L+QA +H +Y + R +RLEFLGDA+++ V+ YL++ F
Sbjct: 20 ELQKKIGITFQNEKLLIQAFTHSSYVNEHRRRFHEDNERLEFLGDAVLELTVSQYLFQKF 79
Query: 172 SHLSPGEISDIRSAMVNNVTFASYA 196
H+S G+++ +R+A+V + +A
Sbjct: 80 PHMSEGQLTKLRAAIVCEPSLVKFA 104
>gi|390603552|gb|EIN12944.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 1524
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 120/251 (47%), Gaps = 50/251 (19%)
Query: 12 YQDPTEDGKKVSSPEKLPSSSYNFLDRIKLGDKVVADVVESLTGV-YLRSC---GIEGAM 67
+Q + D KK+ E + +++ + +L K++AD+VE++ G YL +E
Sbjct: 1104 WQKSSGDEKKMPESE-VDTNAEKGRGQPQLSMKMLADIVEAIIGAAYLHGSFDLAVEVTR 1162
Query: 68 LFLQALNI-LPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIP-ECTQLEKRINYTFQ 125
LF ++I P + I+ + QA +D LR IP + +E+ + Y+F
Sbjct: 1163 LFDIGIDIKTPPTCIE-----------RILVRAQA-SVDDLREIPSQIDVVERMLGYSFN 1210
Query: 126 DKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENF-SHLSPGEISDIRS 184
+K L++AL+H + T SY+R+EFLGDA++D +VT YLY + PG + +
Sbjct: 1211 NKVLLVEALTHASLQGTEGTISYERMEFLGDAVLDMVVTDYLYRRSDKNYGPGHMHLRKQ 1270
Query: 185 AMVN--------------------------NVTFASYAVRLDLHKHLLHDSPRLYEN--- 215
A+VN N + + + R+ L + LLH S R+ ++
Sbjct: 1271 AVVNMHFLAYVCFGISTELEAAMGSSDGVGNTSIRNSSQRVYLWQCLLHSSHRILDDQSN 1330
Query: 216 -VTRFAQNQEA 225
TR+ +N++A
Sbjct: 1331 AFTRYQRNRKA 1341
Score = 40.8 bits (94), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 50/108 (46%), Gaps = 3/108 (2%)
Query: 129 FLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
L A++ P R +YQRLE LGD + F+ + L ++ G +S + V
Sbjct: 1014 LLTAAITAPVSGEIR---NYQRLETLGDTALKFMASISLLTDYPLWHEGYLSKKKDHAVA 1070
Query: 189 NVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEE 236
NV A A+ +L++ ++ D + + + A+ Q++ E E E
Sbjct: 1071 NVRLAKIALSKELYRWMIRDRFIVKKWRPKLAEWQKSSGDEKKMPESE 1118
>gi|357129531|ref|XP_003566415.1| PREDICTED: ribonuclease 3-like protein 2-like [Brachypodium
distachyon]
Length = 366
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 78/171 (45%), Gaps = 30/171 (17%)
Query: 113 CTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
++E+ + Y F D+ L +AL+H ++ + SYQRLEF+GDA + + +LY
Sbjct: 31 AARVERLLCYQFHDRGLLEEALTHQSFGDGSV--SYQRLEFVGDAALGNAFSNFLYLTNP 88
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISD 232
+ PG +S +RSA ++ A AVR DL+ L PRL V +F E+ E+ D
Sbjct: 89 TIGPGALSTLRSANISTEKLARVAVRHDLYPLLRRACPRLDLLVGQFI---ESVKQELED 145
Query: 233 EEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEALV 283
D+ YG V V PK L D+ EA+
Sbjct: 146 -----------------------DLGAAPYGGSV--VKAPKVLADIVEAIA 171
>gi|380492403|emb|CCF34628.1| RNase3 domain-containing protein [Colletotrichum higginsianum]
Length = 1362
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 82/154 (53%), Gaps = 18/154 (11%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAM----LFLQALNILPQSKIDVHEALYGPHPSAV 95
++ K +AD+VE+L G + G+E A+ +FLQ + ++ D +ALY P V
Sbjct: 991 RISTKTLADIVEALIGASMIDGGLEKALKCMSIFLQQIKW--RTLDDCRQALYDAAPPDV 1048
Query: 96 RCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLG 155
P L+PL E+ + + F+ K+ L+Q+++H ++ +RLEF+G
Sbjct: 1049 ELPST---LEPL---------EQLVGHEFKKKALLVQSMTHASFTLGNTLGCLERLEFIG 1096
Query: 156 DAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
D+++D+++ + L+ LS + +++AMVN
Sbjct: 1097 DSVLDYVIVSRLFAVTPPLSHQTMHLLKTAMVNG 1130
>gi|115401870|ref|XP_001216523.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114190464|gb|EAU32164.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1635
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 78/161 (48%), Gaps = 25/161 (15%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQAL----NILPQSKIDVHEALYGPHPSAVR 96
L KV+ADVVESL G G A ++ L I P + VHE+ PH
Sbjct: 1009 LSSKVLADVVESLIGAAYMDGGQAKAHTCIRRLLPEIEICPITPPPVHES--APHVMN-- 1064
Query: 97 CPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGD 156
L++ + YTF +++ L++AL+HP+ ++ T SYQRLEFLGD
Sbjct: 1065 -----------------DSLKQHLGYTFVNEALLVEALTHPSCRSDASTQSYQRLEFLGD 1107
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAV 197
A++D +V + + GE++ I+ A+ N A + +
Sbjct: 1108 AVLDMVVVHAMAHHAVECPQGEMTMIKHALTNANLLAFFCM 1148
Score = 44.7 bits (104), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 5/92 (5%)
Query: 124 FQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIR 183
F ++ A+S PT + T YQR EF GD+++ F V+ LY + G +S+ R
Sbjct: 903 FSSTRHVITAISAPTAQS---PTDYQRYEFFGDSVLKFTVSCQLYMQHPNWPEGYLSEGR 959
Query: 184 SAMVNNVTFASYAVRLDLHKHLLHD--SPRLY 213
+V N A A+ + L +L +PR +
Sbjct: 960 DEIVQNNRLARAALDVGLDAFILTRRFTPRKW 991
>gi|57506125|ref|ZP_00372047.1| ribonuclease III (rnc) [Campylobacter upsaliensis RM3195]
gi|57015609|gb|EAL52401.1| ribonuclease III (rnc) [Campylobacter upsaliensis RM3195]
Length = 224
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 57/86 (66%), Gaps = 3/86 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE ++NY F+++ L+ AL+H + N + +RLEFLGDA++D +V +L+ F + +
Sbjct: 7 LEAKLNYKFKEQKLLIYALTHKSAKKN---YNNERLEFLGDAVLDLVVGEFLFHKFKNEA 63
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDL 201
G++S +R+A+VN +FA A L+L
Sbjct: 64 EGDLSKLRAALVNEKSFAKIATSLNL 89
>gi|322707759|gb|EFY99337.1| Dicer-like protein 2 [Metarhizium anisopliae ARSEF 23]
Length = 1442
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 78/150 (52%), Gaps = 12/150 (8%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQA-LNILPQSKIDVHEALYGPHPSAVRCP 98
KL K +ADVVE+L G + GI A+ + +N + + + AL+
Sbjct: 1092 KLSTKTLADVVEALIGASYVNGGITKALSCISLFVNEIQWQDVSANRALFF--------- 1142
Query: 99 EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAI 158
+ AR D L E LE + Y F KS L++A++H + + SY+ LEF+GDAI
Sbjct: 1143 KMARDQDKLP--AELKPLEHLVGYQFNKKSLLIEAMTHQSCMFDYQRRSYEHLEFIGDAI 1200
Query: 159 IDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
+DF++ +Y L+P ++ +++AMVN
Sbjct: 1201 LDFIIVRKMYTAEPLLAPHQMHSLKTAMVN 1230
>gi|67459568|ref|YP_247192.1| ribonuclease III [Rickettsia felis URRWXCal2]
gi|75536032|sp|Q4UKA8.1|RNC_RICFE RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|67005101|gb|AAY62027.1| Ribonuclease III [Rickettsia felis URRWXCal2]
Length = 225
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 68/116 (58%), Gaps = 13/116 (11%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPT---YNANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+LEK + Y+F++K L++ALSHP+ ++ + Y+RLEFLGDA+++ +VT L++NF
Sbjct: 6 KLEKLLGYSFKNKELLIEALSHPSLRQHHEYKDDKDYERLEFLGDAVLNLVVTEILFKNF 65
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL----------HDSPRLYENVT 217
++ + G ++ IRS +V T +L L +++ D+P EN T
Sbjct: 66 ANYNEGNLAKIRSYLVCKETICVVGTKLTLKDYIIMTHGEEVAGGRDNPNNIENAT 121
>gi|304436759|ref|ZP_07396727.1| ribonuclease III [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304370239|gb|EFM23896.1| ribonuclease III [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 238
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
Query: 112 ECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSY-QRLEFLGDAIIDFLVTAYLYE 169
E +L + F D S L +AL+HP+Y N R ++ +RLEFLGDA+++ ++ YLY+
Sbjct: 12 ELVRLSASLGVDFADLSTLDEALTHPSYANEARGHAAHNERLEFLGDAVLELAISTYLYD 71
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
+ H + GE++ +R+++V + T A A RL L HL
Sbjct: 72 AYPHCAEGELTKMRASLVQSETLARLARRLHLGAHL 107
>gi|15603994|ref|NP_220509.1| ribonuclease III [Rickettsia prowazekii str. Madrid E]
gi|383486964|ref|YP_005404644.1| ribonuclease III [Rickettsia prowazekii str. GvV257]
gi|383487540|ref|YP_005405219.1| ribonuclease III [Rickettsia prowazekii str. Chernikova]
gi|383488386|ref|YP_005406064.1| ribonuclease III [Rickettsia prowazekii str. Katsinyian]
gi|383489229|ref|YP_005406906.1| ribonuclease III [Rickettsia prowazekii str. Dachau]
gi|383499364|ref|YP_005412725.1| ribonuclease III [Rickettsia prowazekii str. BuV67-CWPP]
gi|383500204|ref|YP_005413564.1| ribonuclease III [Rickettsia prowazekii str. RpGvF24]
gi|6226018|sp|Q9ZE31.1|RNC_RICPR RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|3860685|emb|CAA14586.1| RIBONUCLEASE III (rnc) [Rickettsia prowazekii str. Madrid E]
gi|380757329|gb|AFE52566.1| ribonuclease III [Rickettsia prowazekii str. GvV257]
gi|380757901|gb|AFE53137.1| ribonuclease III [Rickettsia prowazekii str. RpGvF24]
gi|380760419|gb|AFE48941.1| ribonuclease III [Rickettsia prowazekii str. Chernikova]
gi|380761265|gb|AFE49786.1| ribonuclease III [Rickettsia prowazekii str. Katsinyian]
gi|380762110|gb|AFE50630.1| ribonuclease III [Rickettsia prowazekii str. BuV67-CWPP]
gi|380762952|gb|AFE51471.1| ribonuclease III [Rickettsia prowazekii str. Dachau]
Length = 225
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 13/116 (11%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPT---YNANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+LE + Y+F++K L++ALSHP+ Y+ + Y+RLEFLGDA+++ L+T L++NF
Sbjct: 6 KLETLLGYSFKNKELLIEALSHPSLRQYHEYKYDKDYERLEFLGDAVLNLLITEILFKNF 65
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL----------HDSPRLYENVT 217
+ G ++ IRS +V T +L L +++ D+P EN T
Sbjct: 66 ENYKEGNLAKIRSYLVCKETICIVGTKLALKDYIIMTHGEEVAGGRDNPNNIENAT 121
>gi|85105148|ref|XP_961898.1| hypothetical protein NCU08270 [Neurospora crassa OR74A]
gi|74616659|sp|Q7S8J7.1|DCL1_NEUCR RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl-1; Includes: RecName:
Full=ATP-dependent helicase dcl-1
gi|28923482|gb|EAA32662.1| predicted protein [Neurospora crassa OR74A]
Length = 1584
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/247 (25%), Positives = 107/247 (43%), Gaps = 20/247 (8%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKIDVHEAL-YGPHPSAVRCP 98
L DK +ADV E+L G + +G+ + ++A+ + + K H + YG + + + P
Sbjct: 1186 LADKSIADVCEALIGAAYLTGQEKGSFDMAIKAVTAMVKDK--KHRMISYGDYYAVYQKP 1243
Query: 99 EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNA--NRITTSYQRLEFLGD 156
+ +R+ Y F+ L A HPTY + R+ SYQRLEFLGD
Sbjct: 1244 TWQTESANSAQRDMAKKFSERMGYKFKHPRLLRAAFQHPTYPSLYERLP-SYQRLEFLGD 1302
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENV 216
A+ D + YL+ F P +++ + AMV+N + L +K + SP + +++
Sbjct: 1303 ALFDMVAVDYLFRKFPAADPQWLTEHKMAMVSNQFLCCLSFHLGFNKCIATMSPSILKDI 1362
Query: 217 TRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALG 276
+ E E E ++E I + D + + +PK L
Sbjct: 1363 AEYVTEIE--------EALETAKQEAINAGKT-----ADEYSRDYWVHITHASRLPKCLS 1409
Query: 277 DVFEALV 283
DV EA +
Sbjct: 1410 DVVEAYI 1416
>gi|392394753|ref|YP_006431355.1| ribonuclease III [Desulfitobacterium dehalogenans ATCC 51507]
gi|390525831|gb|AFM01562.1| ribonuclease III [Desulfitobacterium dehalogenans ATCC 51507]
Length = 262
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/105 (38%), Positives = 58/105 (55%), Gaps = 3/105 (2%)
Query: 105 DPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDF 161
D ++ IP L KR+ AL+HP+Y N + QRLEFLGDAI+DF
Sbjct: 27 DTVKRIPTGIGLAKRLELDDPPNRLFTTALTHPSYLFENPQSGLENNQRLEFLGDAILDF 86
Query: 162 LVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+V YLY ++ GE++ +R+A+VN T A A ++ L + LL
Sbjct: 87 VVAEYLYLSYPERPEGELTKMRAAVVNESTLARTAKKIRLGEELL 131
>gi|224116530|ref|XP_002317324.1| predicted protein [Populus trichocarpa]
gi|222860389|gb|EEE97936.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 64/105 (60%), Gaps = 3/105 (2%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
+EK +NY F++K L +AL+H +Y + SYQR+EFLGDA + ++ Y+Y + L
Sbjct: 8 VEKILNYKFKNKRHLEEALTHSSYTD---SASYQRMEFLGDAALGLALSNYVYLAYPQLD 64
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
PG +S +R+A ++ A A++ L++ + H++ L + V F+
Sbjct: 65 PGHLSLLRAANISTEKLARVAIKHGLYRFVRHNATALDDKVKEFS 109
>gi|331005223|ref|ZP_08328616.1| Ribonuclease III [gamma proteobacterium IMCC1989]
gi|330420966|gb|EGG95239.1| Ribonuclease III [gamma proteobacterium IMCC1989]
Length = 217
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 61/102 (59%), Gaps = 4/102 (3%)
Query: 111 PECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYEN 170
P+ QL+KRI+Y F D+S L AL+H +++ +T+ +RLEFLGD+++ ++ L+E
Sbjct: 5 PDLKQLQKRIDYQFSDESLLETALTHRSFS----STNNERLEFLGDSLLGVTISQQLFEQ 60
Query: 171 FSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
F + G +S RS +V VT A+ A L +L+ S L
Sbjct: 61 FPDVKEGILSRQRSRLVKGVTLAALAREFSLSDYLIMGSGEL 102
>gi|383481096|ref|YP_005390011.1| ribonuclease III [Rickettsia rhipicephali str. 3-7-female6-CWPP]
gi|378933435|gb|AFC71938.1| ribonuclease III [Rickettsia rhipicephali str. 3-7-female6-CWPP]
Length = 227
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPT---YNANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
QLEK ++Y+F++K L++ALSHP+ ++ + Y+RLEFLGDA+++ ++T L+ NF
Sbjct: 6 QLEKLLSYSFKNKELLIEALSHPSLRQHHEYKDDKDYERLEFLGDAVLNLVITEILFRNF 65
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
++ + G ++ IRS +V T +L L +++
Sbjct: 66 ANYNEGHLAKIRSYLVCKETICMVGAKLTLKNYII 100
>gi|304413540|ref|ZP_07395013.1| ribonuclease III [Candidatus Regiella insecticola LSR1]
gi|304284383|gb|EFL92776.1| ribonuclease III [Candidatus Regiella insecticola LSR1]
Length = 235
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/91 (40%), Positives = 59/91 (64%), Gaps = 4/91 (4%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+LE R+ Y F+ ++ L+QAL+H + A+R T +RLEFLGDAI++F + LY+ FS +
Sbjct: 8 KLETRLGYAFKQRALLVQALTHRS--ASR--THNERLEFLGDAILNFFIAKALYQRFSDI 63
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
+ G++S +R+ +V T A A DL +L
Sbjct: 64 NEGDMSRMRATLVRGKTLAEIAHEFDLSDYL 94
>gi|302661784|ref|XP_003022555.1| RNA helicase/RNAse III, putative [Trichophyton verrucosum HKI 0517]
gi|291186507|gb|EFE41937.1| RNA helicase/RNAse III, putative [Trichophyton verrucosum HKI 0517]
Length = 1468
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/154 (35%), Positives = 79/154 (51%), Gaps = 20/154 (12%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAM----LFLQALNILPQSKIDVHEALYGPHPS-A 94
KL K +ADVVESL GV + G + LFL +N LP + E LY P
Sbjct: 1121 KLSTKTLADVVESLIGVAIIDGGENKVLRCLELFLPEINWLPSG--ERIEILYDSAPDFN 1178
Query: 95 VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFL 154
CP +++E I+Y+F K+ L +LSHP+ + +T YQRLEFL
Sbjct: 1179 DDCPRDI-----------LSKIEPLIDYSFTKKALLAASLSHPSNPISGMT--YQRLEFL 1225
Query: 155 GDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
GD+I+D +VT L+ + ++ IR+A+VN
Sbjct: 1226 GDSILDNIVTRALFRCKREIPHQDMHLIRTALVN 1259
>gi|291550077|emb|CBL26339.1| RNAse III [Ruminococcus torques L2-14]
Length = 228
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ---RLEFLGDAIIDFLVTAYLYENF 171
+LE++I Y F+DKS + +AL H +Y + Y+ RLEFLGDA+++ + +AYL+ F
Sbjct: 6 ELEQKIGYVFKDKSLIERALMHSSYTNEKHLKKYECNERLEFLGDAVLELVSSAYLFNEF 65
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+S GE++ R++MV + A A + L +LL
Sbjct: 66 PKVSEGELTKTRASMVCEPSLAMCARDIGLGDYLL 100
>gi|260881779|ref|ZP_05893556.1| ribonuclease III [Mitsuokella multacida DSM 20544]
gi|260847870|gb|EEX67877.1| ribonuclease III [Mitsuokella multacida DSM 20544]
Length = 247
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTY--NANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
L +R+ TF D + L QAL+H +Y + R T +RLEFLGDA+++ + YLYE+F
Sbjct: 20 LSERLGVTFHDIALLDQALTHTSYANESKRNTAHNERLEFLGDAVLELASSTYLYEHFPE 79
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ GE++ R+++V + T A A L L +LL
Sbjct: 80 MPEGELTKTRASIVCSTTLAKLATGLHLGDYLL 112
>gi|386081946|ref|YP_005998523.1| Ribonuclease III [Rickettsia prowazekii str. Rp22]
gi|292571710|gb|ADE29625.1| Ribonuclease III [Rickettsia prowazekii str. Rp22]
Length = 225
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 65/116 (56%), Gaps = 13/116 (11%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPT---YNANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+LE + Y+F++K L++ALSHP+ Y+ + Y+RLEFLGDA+++ L+T L++NF
Sbjct: 6 KLETLLGYSFKNKELLIEALSHPSLRQYHEYKYDKDYERLEFLGDAVLNLLITEILFKNF 65
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL----------HDSPRLYENVT 217
+ G ++ IRS +V T +L L +++ D+P EN T
Sbjct: 66 ENYKEGNLAKIRSYLVCKETICIVGTKLALKDYIIMTHGEEVAGGRDNPNNIENAT 121
>gi|239948355|ref|ZP_04700108.1| GTP-binding protein Era [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239922631|gb|EER22655.1| GTP-binding protein Era [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 567
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 69/116 (59%), Gaps = 13/116 (11%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPT---YNANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+LEK ++Y+F++K L++ALSHP+ ++ + Y+RLEFLGDA+++ ++T L++NF
Sbjct: 6 KLEKLLSYSFKNKELLIEALSHPSLRQHHEYKDDKDYERLEFLGDAVLNLVITEILFKNF 65
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL----------HDSPRLYENVT 217
++ + G ++ IRS +V T +L L +++ D+P EN T
Sbjct: 66 ANYNEGNLAKIRSYLVCKETICMVGAKLALKDYIIMTHGEEVVGGRDNPNNIENAT 121
>gi|20807916|ref|NP_623087.1| ribonuclease III [Thermoanaerobacter tengcongensis MB4]
gi|22654052|sp|Q8R9W3.1|RNC_THETN RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|20516484|gb|AAM24691.1| dsRNA-specific ribonuclease [Thermoanaerobacter tengcongensis MB4]
Length = 228
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTY--NANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
T LE++INY F+DK+ LL+AL+H ++ S +RLEFLGD+++ +++ YLY+N
Sbjct: 3 TYLEQKINYEFKDKTLLLEALTHSSWAHEGKNEKVSNERLEFLGDSVLSLVISEYLYKNR 62
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
L G +S R+ +V + A A +++L L
Sbjct: 63 KDLEEGSLSKYRAEIVCEPSLARCARKIELGSFL 96
>gi|150021479|ref|YP_001306833.1| ribonuclease III [Thermosipho melanesiensis BI429]
gi|149794000|gb|ABR31448.1| Ribonuclease III [Thermosipho melanesiensis BI429]
Length = 231
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 55/92 (59%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
++E I Y F++K L AL+H +Y SY+RLEFLGD++ID LV LYE + L
Sbjct: 8 EIEHVIGYRFRNKELLFTALTHTSYANENKKQSYERLEFLGDSVIDILVCTILYEQYQTL 67
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ G ++ I+SA+ + A + +L K++L
Sbjct: 68 NEGTMAQIKSAVTSEDILFEIAKKFNLGKYIL 99
>gi|118498035|ref|YP_899085.1| ribonuclease III [Francisella novicida U112]
gi|194323260|ref|ZP_03057044.1| ribonuclease III [Francisella novicida FTE]
gi|208779555|ref|ZP_03246900.1| ribonuclease III [Francisella novicida FTG]
gi|254373391|ref|ZP_04988879.1| ribonuclease III [Francisella tularensis subsp. novicida GA99-3549]
gi|385793432|ref|YP_005826408.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|189043316|sp|A0Q7W6.1|RNC_FRATN RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|118423941|gb|ABK90331.1| ribonuclease III [Francisella novicida U112]
gi|151571117|gb|EDN36771.1| ribonuclease III [Francisella novicida GA99-3549]
gi|194322624|gb|EDX20104.1| ribonuclease III [Francisella tularensis subsp. novicida FTE]
gi|208744516|gb|EDZ90815.1| ribonuclease III [Francisella novicida FTG]
gi|332678757|gb|AEE87886.1| Ribonuclease III [Francisella cf. novicida Fx1]
Length = 230
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 67/115 (58%), Gaps = 12/115 (10%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+PE ++ + Y F+D + L++AL+H + + +Y+RLEFLGD+++ F++ LY+
Sbjct: 2 VPEYSRFYNILGYNFKDYTLLIRALTHRS----KTKKNYERLEFLGDSVLSFVIAEVLYK 57
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL--------HDSPRLYENV 216
F+ L+ G++S +RS +V T A A L + ++++ H ++ E+V
Sbjct: 58 QFTDLAEGKLSQLRSKLVKGTTLAQLASSLKMDEYIILGASEQGGHKREKILEDV 112
>gi|89255958|ref|YP_513320.1| ribonuclease III [Francisella tularensis subsp. holarctica LVS]
gi|187931188|ref|YP_001891172.1| ribonuclease III [Francisella tularensis subsp. mediasiatica
FSC147]
gi|254367315|ref|ZP_04983341.1| ribonuclease III [Francisella tularensis subsp. holarctica 257]
gi|254368791|ref|ZP_04984804.1| hypothetical protein FTAG_00596 [Francisella tularensis subsp.
holarctica FSC022]
gi|421751216|ref|ZP_16188270.1| ribonuclease III [Francisella tularensis subsp. tularensis AS_713]
gi|421753072|ref|ZP_16190076.1| ribonuclease III [Francisella tularensis subsp. tularensis 831]
gi|421756801|ref|ZP_16193697.1| ribonuclease III [Francisella tularensis subsp. tularensis
80700103]
gi|421758668|ref|ZP_16195511.1| ribonuclease III [Francisella tularensis subsp. tularensis
70102010]
gi|422938410|ref|YP_007011557.1| ribonuclease III [Francisella tularensis subsp. holarctica FSC200]
gi|424673937|ref|ZP_18110865.1| ribonuclease III [Francisella tularensis subsp. tularensis
70001275]
gi|122501056|sp|Q2A4N2.1|RNC_FRATH RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|238691551|sp|B2SFY4.1|RNC_FRATM RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|89143789|emb|CAJ78994.1| Ribonuclease III [Francisella tularensis subsp. holarctica LVS]
gi|134253131|gb|EBA52225.1| ribonuclease III [Francisella tularensis subsp. holarctica 257]
gi|157121712|gb|EDO65882.1| hypothetical protein FTAG_00596 [Francisella tularensis subsp.
holarctica FSC022]
gi|187712097|gb|ACD30394.1| ribonuclease III [Francisella tularensis subsp. mediasiatica
FSC147]
gi|407293561|gb|AFT92467.1| ribonuclease III [Francisella tularensis subsp. holarctica FSC200]
gi|409088288|gb|EKM88362.1| ribonuclease III [Francisella tularensis subsp. tularensis 831]
gi|409088525|gb|EKM88591.1| ribonuclease III [Francisella tularensis subsp. tularensis AS_713]
gi|409091947|gb|EKM91931.1| ribonuclease III [Francisella tularensis subsp. tularensis
70102010]
gi|409093236|gb|EKM93189.1| ribonuclease III [Francisella tularensis subsp. tularensis
80700103]
gi|417435480|gb|EKT90381.1| ribonuclease III [Francisella tularensis subsp. tularensis
70001275]
Length = 230
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 67/115 (58%), Gaps = 12/115 (10%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+PE ++ + Y F+D + L++AL+H + + +Y+RLEFLGD+++ F++ LY+
Sbjct: 2 VPEYSRFYNILGYNFKDYTLLIRALTHRS----KTKKNYERLEFLGDSVLSFVIAEVLYK 57
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL--------HDSPRLYENV 216
F+ L+ G++S +RS +V T A A L + ++++ H ++ E+V
Sbjct: 58 QFTDLAEGKLSQLRSKLVKGTTLAQLASSLKMDEYIILGASEQGGHKREKILEDV 112
>gi|345571082|gb|EGX53897.1| hypothetical protein AOL_s00004g556 [Arthrobotrys oligospora ATCC
24927]
Length = 1587
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 86/189 (45%), Gaps = 6/189 (3%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPE 99
+L DK +ADV E+L G L G++ A + L K++ + Y S PE
Sbjct: 1229 RLSDKSMADVCEALIGASLCGGGLDMAARMVTTLVNKSIHKVNSFKDYY----SLYTLPE 1284
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLGDAI 158
G ++E+ + Y F+ L A +HP++ Y+RLEFLGDA+
Sbjct: 1285 YQIGPVNASQQELADKIERDMGYKFKYPRLLRSAFTHPSFPTMWEKIPCYERLEFLGDAL 1344
Query: 159 IDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTR 218
ID L+E F P +++ + +M+NN + +V+L H HL + V
Sbjct: 1345 IDMACVEDLWERFPGKDPQWLTEHKMSMINNRFQGALSVKLKFHTHLRAMGAHINSAVQE 1404
Query: 219 FAQ-NQEAR 226
+ Q +EAR
Sbjct: 1405 YVQLIEEAR 1413
>gi|156501954|ref|YP_001428019.1| ribonuclease III [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|290954597|ref|ZP_06559218.1| ribonuclease III [Francisella tularensis subsp. holarctica URFT1]
gi|423050289|ref|YP_007008723.1| ribonuclease III [Francisella tularensis subsp. holarctica F92]
gi|189043315|sp|A7NAR0.1|RNC_FRATF RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|156252557|gb|ABU61063.1| ribonuclease III [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|421951011|gb|AFX70260.1| ribonuclease III [Francisella tularensis subsp. holarctica F92]
Length = 230
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+PE ++ + Y F+D + L++AL+H + + +Y+RLEFLGD+++ F++ LY+
Sbjct: 2 VPEYSRFYNILGYNFKDYTLLIRALTHRS----KTKKNYERLEFLGDSVLSFVIAEVLYK 57
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
F+ L+ G++S +RS +V T A A L + ++++
Sbjct: 58 QFTDLAEGKLSQLRSKLVKGTTLAQLASSLKMDEYII 94
>gi|254374854|ref|ZP_04990335.1| ribonuclease III [Francisella novicida GA99-3548]
gi|151572573|gb|EDN38227.1| ribonuclease III [Francisella novicida GA99-3548]
Length = 230
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 67/115 (58%), Gaps = 12/115 (10%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+PE ++ + Y F+D + L++AL+H + + +Y+RLEFLGD+++ F++ LY+
Sbjct: 2 VPEYSRFYNILGYNFKDYTLLIRALTHRS----KTKKNYERLEFLGDSVLSFVIAEVLYK 57
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL--------HDSPRLYENV 216
F+ L+ G++S +RS +V T A A L + ++++ H ++ E+V
Sbjct: 58 QFTDLAEGKLSQLRSKLVKGTTLAQLASSLKMDEYIILGASEQGGHKREKILEDV 112
>gi|242078881|ref|XP_002444209.1| hypothetical protein SORBIDRAFT_07g015020 [Sorghum bicolor]
gi|241940559|gb|EES13704.1| hypothetical protein SORBIDRAFT_07g015020 [Sorghum bicolor]
Length = 291
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 61/105 (58%), Gaps = 1/105 (0%)
Query: 116 LEKRINYTFQDKSFLLQALSHPT-YNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+E + Y F DKS + AL+H + Y R +Y+RLE+LGD ++ L++ ++ N+ L
Sbjct: 30 IEAVLGYEFADKSLVELALTHGSFYFPYRPGDTYERLEYLGDGVLTCLMSREVFRNYRTL 89
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
PG ++ +R+A V+ A AV LH+ L H +P+L + + F
Sbjct: 90 PPGPLTRLRAANVDTEKLARVAVDRGLHRFLRHKAPKLQDQICLF 134
>gi|406936515|gb|EKD70217.1| hypothetical protein ACD_46C00599G0006 [uncultured bacterium]
Length = 224
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+L ++NYTFQD+S L AL+H + +RLEFLGDA+++F++ LY+ F
Sbjct: 4 KLATKLNYTFQDESLLKTALTHRSKGGEH----NERLEFLGDAVVNFVIAEVLYKQFPQA 59
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ GE+S R+ +VN T A A + DL L
Sbjct: 60 TEGELSRWRATLVNRDTLADLAKKFDLGSFLF 91
>gi|146296620|ref|YP_001180391.1| ribonuclease III [Caldicellulosiruptor saccharolyticus DSM 8903]
gi|145410196|gb|ABP67200.1| Ribonuclease III [Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 224
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 64/93 (68%), Gaps = 1/93 (1%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
T +EK++ Y F++ + L AL+H + + + Y+RLEFLGDA+++ +V+ YL+E+F
Sbjct: 2 TDIEKKLGYRFKNPNLLKLALTHKSATHDD-KSCYERLEFLGDAVLELVVSKYLFEHFPQ 60
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
LS GE++++R+ +V + T + A L+L ++++
Sbjct: 61 LSEGELTNLRATIVCSETLSKVAETLNLKRYIV 93
>gi|381401154|ref|ZP_09926069.1| ribonuclease III [Kingella kingae PYKK081]
gi|380833843|gb|EIC13696.1| ribonuclease III [Kingella kingae PYKK081]
Length = 241
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 60/93 (64%), Gaps = 4/93 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
+ L+ ++ YTF+ ++L QAL+H + ++ +Y+RLEF+GDAI+D+++T L+E F +
Sbjct: 11 SSLQTKLGYTFKQPAWLQQALTHRSAHSQ----NYERLEFVGDAILDYVITLMLFEAFPN 66
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
L G +S +R+ +V T A A L L K L+
Sbjct: 67 LPEGRLSVLRTHLVKEATLAEVARELGLGKALI 99
>gi|413948832|gb|AFW81481.1| hypothetical protein ZEAMMB73_371069 [Zea mays]
Length = 285
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 80/170 (47%), Gaps = 30/170 (17%)
Query: 113 CTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
++E+ + Y F D++ L +AL+H +++ + SYQRLEF+GDA + + +LY
Sbjct: 41 AARVERLLRYQFCDRALLEEALTHQSFSDGAL--SYQRLEFVGDAALGLAFSNFLYLTNP 98
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISD 232
L PG +S +R+A ++ A AVR DL+ L PRL V +F E+ E+
Sbjct: 99 TLGPGALSTLRAANISTEKLARVAVRHDLYPLLRRKCPRLDLLVGQFI---ESVKQELMH 155
Query: 233 EEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEAL 282
D+ T YG V V PK L D+ EA+
Sbjct: 156 -----------------------DLATAPYGGSV--VKAPKVLADIVEAI 180
>gi|261419391|ref|YP_003253073.1| ribonuclease III [Geobacillus sp. Y412MC61]
gi|319766206|ref|YP_004131707.1| ribonuclease III [Geobacillus sp. Y412MC52]
gi|448237348|ref|YP_007401406.1| ribonuclease 3 [Geobacillus sp. GHH01]
gi|261375848|gb|ACX78591.1| ribonuclease III [Geobacillus sp. Y412MC61]
gi|317111072|gb|ADU93564.1| ribonuclease III [Geobacillus sp. Y412MC52]
gi|445206190|gb|AGE21655.1| ribonuclease 3 [Geobacillus sp. GHH01]
Length = 246
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+L+K+I TF+++ L+QA +H +Y + R+ +RLEFLGDA+++ V+ YL++ F
Sbjct: 20 ELQKKIGITFRNEKLLIQAFTHSSYVNEHRRRLHEDNERLEFLGDAVLELTVSQYLFQKF 79
Query: 172 SHLSPGEISDIRSAMVNNVTFASYA 196
H+S G+++ +R+A+V + +A
Sbjct: 80 PHMSEGQLTKLRAAIVCEPSLVKFA 104
>gi|297530632|ref|YP_003671907.1| ribonuclease III [Geobacillus sp. C56-T3]
gi|297253884|gb|ADI27330.1| ribonuclease III [Geobacillus sp. C56-T3]
Length = 246
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+L+K+I TF+++ L+QA +H +Y + R+ +RLEFLGDA+++ V+ YL++ F
Sbjct: 20 ELQKKIGITFRNEKLLIQAFTHSSYVNEHRRRLHEDNERLEFLGDAVLELTVSQYLFQKF 79
Query: 172 SHLSPGEISDIRSAMVNNVTFASYA 196
H+S G+++ +R+A+V + +A
Sbjct: 80 PHMSEGQLTKLRAAIVCEPSLVKFA 104
>gi|419550405|ref|ZP_14088911.1| ribonuclease III [Campylobacter coli 2688]
gi|419553745|ref|ZP_14091902.1| ribonuclease III [Campylobacter coli 2698]
gi|380530677|gb|EIA55739.1| ribonuclease III [Campylobacter coli 2688]
gi|380533733|gb|EIA58640.1| ribonuclease III [Campylobacter coli 2698]
Length = 224
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 58/86 (67%), Gaps = 3/86 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE+++ Y F+DK L+ AL+H ++ + + +RLEFLGDA++D +V YL+ F+ +
Sbjct: 7 LEQKLAYKFKDKDLLIHALTHKSF---KKPYNNERLEFLGDAVLDLVVGEYLFHKFAKDA 63
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDL 201
G++S +R+A+VN +FA A ++L
Sbjct: 64 EGDLSKLRAALVNEKSFAKIANSVNL 89
>gi|115314441|ref|YP_763164.1| ribonuclease III [Francisella tularensis subsp. holarctica OSU18]
gi|122325533|sp|Q0BN07.1|RNC_FRATO RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|115129340|gb|ABI82527.1| ribonuclease III [Francisella tularensis subsp. holarctica OSU18]
Length = 230
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 67/115 (58%), Gaps = 12/115 (10%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+PE ++ + Y F+D + L++AL+H + + +Y+RLEFLGD+++ F++ LY+
Sbjct: 2 VPEYSRFYNILGYNFKDYTLLIRALTHRS----KTKKNYERLEFLGDSVLSFVIAEVLYK 57
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL--------HDSPRLYENV 216
F+ L+ G++S +RS +V T A A L + ++++ H ++ E+V
Sbjct: 58 QFTDLAEGKLSQLRSKLVKGTTLAQLASSLKMDEYIILGASEQGGHKREKILEDV 112
>gi|115468004|ref|NP_001057601.1| Os06g0358800 [Oryza sativa Japonica Group]
gi|75254269|sp|Q69KJ0.1|RTL3_ORYSJ RecName: Full=Ribonuclease 3-like protein 3; AltName:
Full=Ribonuclease III-like protein 3; Short=RNase
III-like protein 3
gi|51091751|dbj|BAD36550.1| CAF protein-like [Oryza sativa Japonica Group]
gi|113595641|dbj|BAF19515.1| Os06g0358800 [Oryza sativa Japonica Group]
gi|125597181|gb|EAZ36961.1| hypothetical protein OsJ_21299 [Oryza sativa Japonica Group]
Length = 299
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 66/120 (55%), Gaps = 6/120 (5%)
Query: 106 PLRYIP-----ECTQLEKRINYTFQDKSFLLQALSHPT-YNANRITTSYQRLEFLGDAII 159
P ++P E +E + Y F+DK+ + +AL+H + Y R +Y+RLE+LGDA++
Sbjct: 27 PPGFVPPMGPGEVAAVESLLGYEFRDKALVEEALTHGSFYYPYRPGVTYERLEYLGDAVL 86
Query: 160 DFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
+V+ ++ + L PG ++ +R+A V+ A AV LH L H +P L +T F
Sbjct: 87 TCVVSREVFLTYGQLQPGPLTRLRAANVDKEKLARVAVVHGLHHFLRHKAPNLDGQITDF 146
>gi|367035818|ref|XP_003667191.1| hypothetical protein MYCTH_2312762 [Myceliophthora thermophila ATCC
42464]
gi|347014464|gb|AEO61946.1| hypothetical protein MYCTH_2312762 [Myceliophthora thermophila ATCC
42464]
Length = 1475
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 78/165 (47%), Gaps = 22/165 (13%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAM----LFLQALNILPQSKIDVHEALYGPHPSAV 95
+L K +ADVVE+L G S G A+ LFL S E LY P
Sbjct: 1104 RLSTKTLADVVEALIGASYISGGTPKALACMSLFLPEFEW--HSIEHCREVLYNQAPDDE 1161
Query: 96 RCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLG 155
P R L+ L + YTF +S L++A++HP+ N I S RLEFLG
Sbjct: 1162 PLPATMRSLESL------------LGYTFTKRSLLVEAMTHPSCNGPNIRASLDRLEFLG 1209
Query: 156 DAIIDFLVTAYLYENFSHLSPGEISD---IRSAMVNNVTFASYAV 197
DAI+D++V L+ + S +P E S +R+ +VN A A+
Sbjct: 1210 DAILDYIVVKALF-DMSTPTPLENSTLHLLRTTLVNADILAFLAL 1253
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 35/67 (52%)
Query: 143 RITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLH 202
R T Y+R+EFLGDAI+ F N+ G +S ++ +V+N AV L
Sbjct: 1012 RGPTDYERVEFLGDAILKFCTAVNCSANYPIHPEGFLSRLKDKIVSNSRLFHAAVDFGLD 1071
Query: 203 KHLLHDS 209
++++H +
Sbjct: 1072 RYIIHKT 1078
>gi|418020620|ref|ZP_12659862.1| ribonuclease III [Candidatus Regiella insecticola R5.15]
gi|347604028|gb|EGY28752.1| ribonuclease III [Candidatus Regiella insecticola R5.15]
Length = 235
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 57/87 (65%), Gaps = 4/87 (4%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+LE R+ Y F+ ++ L+QAL+H + A+RI +RLEFLGDAI++F + LY+ FS +
Sbjct: 8 KLETRLGYAFKQRALLVQALTHRS--ASRIHN--ERLEFLGDAILNFFIAKALYQRFSDI 63
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDL 201
+ G++S +R+ +V T A A DL
Sbjct: 64 NEGDMSRMRATLVRGKTLAEIAHEFDL 90
>gi|149194957|ref|ZP_01872050.1| ribonuclease III [Caminibacter mediatlanticus TB-2]
gi|149134878|gb|EDM23361.1| ribonuclease III [Caminibacter mediatlanticus TB-2]
Length = 227
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 113 CTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
+L+K + Y F+D+ + +AL+H +Y+ + +RLE+LGDA++D +V YLY F
Sbjct: 3 AEELQKSLGYQFKDEKLITEALTHRSYSKE---FNNERLEYLGDAVLDLIVGEYLYNLFP 59
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G +S +R+A+VN +F A RL+L K+L
Sbjct: 60 KAEEGILSKLRAALVNEESFDKLAKRLNLGKYLF 93
>gi|148265180|ref|YP_001231886.1| ribonuclease III [Geobacter uraniireducens Rf4]
gi|146398680|gb|ABQ27313.1| RNAse III [Geobacter uraniireducens Rf4]
Length = 240
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 3/93 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
LE INY F D+S L +AL+H ++ + + T QRLEF GDA+IDFL++ L E F
Sbjct: 12 LESAINYHFADRSLLTEALTHRSFVNESGGKWTKDNQRLEFFGDAVIDFLLSRMLLERFP 71
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G ++ IR+++V+ + AS A + L L
Sbjct: 72 DSREGALTKIRASLVDEGSLASLAEEIGLGAFL 104
>gi|451823164|ref|YP_007459438.1| ribonuclease III [Candidatus Kinetoplastibacterium desouzaii
TCC079E]
gi|451775964|gb|AGF47005.1| ribonuclease III [Candidatus Kinetoplastibacterium desouzaii
TCC079E]
Length = 230
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 60/91 (65%), Gaps = 4/91 (4%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+LE + Y+F + S L AL+H +Y+AN +RLEFLGD+I++ +T L+E FSH+
Sbjct: 5 KLENSLKYSFNNISLLELALTHRSYSANH----NERLEFLGDSILNSSITIILFERFSHI 60
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G +S +R+++V + A A++LD+ ++L
Sbjct: 61 DEGGLSRLRASLVQQNSLAKIAIKLDISRYL 91
>gi|134301463|ref|YP_001121431.1| ribonuclease III [Francisella tularensis subsp. tularensis
WY96-3418]
gi|189043317|sp|A4IWK9.1|RNC_FRATW RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|134049240|gb|ABO46311.1| ribonuclease III [Francisella tularensis subsp. tularensis
WY96-3418]
Length = 230
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 67/115 (58%), Gaps = 12/115 (10%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+PE ++ + Y F+D + L++AL+H + + +Y+RLEFLGD+++ F++ LY+
Sbjct: 2 VPEYSRFYNILGYNFKDCTLLIRALTHRS----KTKKNYERLEFLGDSVLSFVIAEVLYK 57
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL--------HDSPRLYENV 216
F+ L+ G++S +RS +V T A A L + ++++ H ++ E+V
Sbjct: 58 QFTDLAEGKLSQLRSKLVKGTTLAQLASSLKMDEYIILGASEQGGHKREKILEDV 112
>gi|443922458|gb|ELU41905.1| dicer-like protein 1 [Rhizoctonia solani AG-1 IA]
Length = 1426
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 110/260 (42%), Gaps = 56/260 (21%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEAL-YGPHPSAVRCPEQAR 102
K +ADVVE++ G L S G E A + L D + + Y P+ S +
Sbjct: 1043 KTIADVVEAMIGAALLSGGEELAFSVAKTLGFDTLKTCDWLDVISYAPNKSMTMKESDHK 1102
Query: 103 G--LDPLRYIPECTQLEKRINYTFQDKSFLLQALS----------------HPTYNANRI 144
G LD L K I + + LLQA+ + R
Sbjct: 1103 GETLD---------GLIKIIGVSLDNPELLLQAMVRIFLSIIKLEVQLRTVQQHASMARS 1153
Query: 145 TTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKH 204
+ SY+RLEFLGDA++D LV + + SP ++ I+S+MV+N A + LH++
Sbjct: 1154 SESYERLEFLGDAVLDMLVVQSFFSDEEEWSPHSMTLIKSSMVSNRALAIICIESGLHQY 1213
Query: 205 LLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQT-DVYG 263
L+HD L +++ F DE ++ ++ I D Q +
Sbjct: 1214 LMHDINSLAQSIVTFI-----------DEVQKCKQ------------IARTDAQRLKYWS 1250
Query: 264 RVVEYVDVPKALGDVFEALV 283
++V PKALGDV E+L+
Sbjct: 1251 KLV----APKALGDVVESLL 1266
>gi|408906224|emb|CCM11713.1| Ribonuclease III [Helicobacter heilmannii ASB1.4]
Length = 222
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Query: 120 INYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEI 179
+NY F++ L QAL+H + + T+ +RLEFLGDA++D V L+E F L G++
Sbjct: 7 LNYHFKNDGLLQQALTH---RSTQSPTNNERLEFLGDAVLDLAVAEILFERFKDLQEGDL 63
Query: 180 SDIRSAMVNNVTFASYAVRLDLHKHLL 206
S +R+++VN F A+ LDL KH++
Sbjct: 64 SKMRASLVNEKAFHKLALLLDLQKHIV 90
>gi|310828474|ref|YP_003960831.1| ribonuclease III [Eubacterium limosum KIST612]
gi|308740208|gb|ADO37868.1| ribonuclease III [Eubacterium limosum KIST612]
Length = 222
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 64/92 (69%), Gaps = 3/92 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
++E RI YTF+DK L AL+H +++ TT+ +RLEFLGDA+++ +++ YLY+ ++ L
Sbjct: 3 RIEDRIAYTFKDKELLKVALTHSSHSG--TTTNNERLEFLGDAVLELIISEYLYK-YNKL 59
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
S G+++ IRS +V + + A L+L +++L
Sbjct: 60 SEGKMTKIRSNIVCAESLSQAASDLNLGEYML 91
>gi|310779301|ref|YP_003967634.1| RNAse III [Ilyobacter polytropus DSM 2926]
gi|309748624|gb|ADO83286.1| RNAse III [Ilyobacter polytropus DSM 2926]
Length = 237
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 3/96 (3%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAYLYEN 170
+LEK++ YTF+ K L AL H +Y N + + +RLE LGDA++D +VT YLY +
Sbjct: 7 VELEKKLKYTFKSKKLLKHALIHRSYGNENWDYKKVNNERLELLGDAVLDLVVTEYLYLH 66
Query: 171 FSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
F+ S G+++ ++S +V+ A + +L + HLL
Sbjct: 67 FTSSSEGDLAKLKSMIVSEPVLAKISRKLGVGNHLL 102
>gi|289578474|ref|YP_003477101.1| ribonuclease III [Thermoanaerobacter italicus Ab9]
gi|297544750|ref|YP_003677052.1| ribonuclease III [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
gi|289528187|gb|ADD02539.1| ribonuclease III [Thermoanaerobacter italicus Ab9]
gi|296842525|gb|ADH61041.1| ribonuclease III [Thermoanaerobacter mathranii subsp. mathranii
str. A3]
Length = 246
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 63/107 (58%), Gaps = 4/107 (3%)
Query: 102 RGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY--NANRITTSYQRLEFLGDAII 159
RG++ R ++LEK+INY+F++K L++AL+H ++ S +RLEFLGD+++
Sbjct: 11 RGMEVKR--KNLSELEKKINYSFKNKDLLIEALTHSSWAHEGKNSKISNERLEFLGDSVL 68
Query: 160 DFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+++ YLY+N L G +S R+ +V + A A + L LL
Sbjct: 69 SLVISEYLYKNRKDLEEGSLSKYRAEIVCEPSLARCAREIGLGNFLL 115
>gi|449526603|ref|XP_004170303.1| PREDICTED: LOW QUALITY PROTEIN: ribonuclease 3-like protein 2-like
[Cucumis sativus]
Length = 338
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 61/104 (58%), Gaps = 3/104 (2%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE+ ++Y F +KS L +AL+H +Y+A + SY+RLEF+GD+ I +T Y + HL
Sbjct: 8 LERILSYNFNNKSLLEEALTHXSYSA---SASYERLEFVGDSAIGLAITNYFFLASPHLH 64
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRF 219
G +S +R+A V+ A AV L+ ++ DSP + V F
Sbjct: 65 QGHLSLLRAANVSTEKLARVAVTHGLYNYVRRDSPAMDVKVKEF 108
>gi|258514469|ref|YP_003190691.1| ribonuclease III [Desulfotomaculum acetoxidans DSM 771]
gi|257778174|gb|ACV62068.1| ribonuclease III [Desulfotomaculum acetoxidans DSM 771]
Length = 259
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 59/90 (65%), Gaps = 3/90 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
QL +++ + D++ L QAL+H +Y + + T+ QRLEFLGDA+++ LV+ YLY ++
Sbjct: 10 QLMQQVGVAWNDENLLWQALTHSSYVYESGSAAHTNNQRLEFLGDAVLELLVSGYLYSSY 69
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
+ GE++ +R+A+V + A A +L+L
Sbjct: 70 PECAEGELTKLRAAIVCEPSLAKVARQLNL 99
>gi|167046034|gb|ABZ10548.1| dicer-like protein E [Placozoa sp. DMJ-2008]
Length = 359
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/243 (25%), Positives = 104/243 (42%), Gaps = 25/243 (10%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L K +AD VE L G CG + F++ L ++ E L G +
Sbjct: 109 LTKKAIADCVEGLIGYLCLVCGRNSVLRFMRWLGF------EISECLDGIQELIPSIDFR 162
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
A Y +E +NY+F+++S L+ AL+H +Y+ + SY++L FLGD ++
Sbjct: 163 AN-----LYSETANSVETILNYSFRNRSLLMLALTHKSYSGLE-SISYEKLAFLGDTLLI 216
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
+ + +LY ++ P + + + N + A+ DL K LLH S L +
Sbjct: 217 YQIYLFLYTQYTDYQPKDYHLLLEYLTCNRMYGIVAIASDLCKFLLHKSRELTLQIDEIY 276
Query: 221 QNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFE 280
Q EA + + + + L L+E+ ++ VPK LGD F
Sbjct: 277 QALEADDVQSFSSTVQSGCSYKMKTTL---LLEKLSIEQ----------FVPKELGDTFA 323
Query: 281 ALV 283
A+V
Sbjct: 324 AVV 326
>gi|449493233|ref|XP_004159229.1| PREDICTED: ribonuclease 3-like protein 3-like [Cucumis sativus]
Length = 275
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
+E +NY F+DK L +A + +Y+ +S++RLE++GD++++FL+T Y + +LS
Sbjct: 37 IEAILNYEFRDKRLLEEAFTDASYSPEN-CSSFERLEYVGDSVLNFLITREQYFSNPNLS 95
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQE 224
PG ++ +R+A V+ A A+ H++L H+ L++ + F ++ E
Sbjct: 96 PGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGRSIE 144
>gi|157803302|ref|YP_001491851.1| ribonuclease III [Rickettsia canadensis str. McKiel]
gi|379022513|ref|YP_005299174.1| ribonuclease III [Rickettsia canadensis str. CA410]
gi|189043341|sp|A8EXI3.1|RNC_RICCK RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|157784565|gb|ABV73066.1| ribonuclease III [Rickettsia canadensis str. McKiel]
gi|376323451|gb|AFB20692.1| ribonuclease III [Rickettsia canadensis str. CA410]
Length = 227
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 13/117 (11%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPT---YNANRITTSYQRLEFLGDAIIDFLVTAYLYEN 170
+LEK + Y+F++K L++ALSHP+ ++ + Y+RLEFLGDA+++ ++T L+ N
Sbjct: 5 NELEKLLGYSFKNKELLIEALSHPSLRQHHEYKDNKDYERLEFLGDAVLNLVITKILFSN 64
Query: 171 FSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL----------HDSPRLYENVT 217
F+ + G ++ IRS +V T +L L +++ D+P EN T
Sbjct: 65 FASYNEGNLAKIRSYLVCKETICMVGAKLALKDYIIMTYGEEVAGGRDNPNNIENAT 121
>gi|449453708|ref|XP_004144598.1| PREDICTED: ribonuclease 3-like protein 3-like [Cucumis sativus]
Length = 275
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 67/109 (61%), Gaps = 1/109 (0%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
+E +NY F+DK L +A + +Y+ +S++RLE++GD++++FL+T Y + +LS
Sbjct: 37 IEAILNYEFRDKRLLEEAFTDASYSPEN-CSSFERLEYVGDSVLNFLITREQYFSNPNLS 95
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQE 224
PG ++ +R+A V+ A A+ H++L H+ L++ + F ++ E
Sbjct: 96 PGSLTRLRAANVDTEKLARVAITHGFHRYLRHNKADLHQKIEEFGRSIE 144
>gi|373456823|ref|ZP_09548590.1| Ribonuclease 3 [Caldithrix abyssi DSM 13497]
gi|371718487|gb|EHO40258.1| Ribonuclease 3 [Caldithrix abyssi DSM 13497]
Length = 264
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAY 166
IP T++E++I+Y F+DK LL+A H +Y S +RLEFLGDA++D ++ +
Sbjct: 20 IP-VTEIERKIDYQFKDKILLLKAFKHRSYLNMTHESALESNERLEFLGDAVLDLIIAEH 78
Query: 167 LYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
L+ NF + + GE+S RS +V+ A + L ++LL D
Sbjct: 79 LFHNFPNKNEGELSKKRSVLVSRQVLAQITEEIGLGEYLLLDK 121
>gi|134081603|emb|CAK46537.1| unnamed protein product [Aspergillus niger]
Length = 1352
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+ KV+ADVVE+L G G A + LP+ ++ + P P
Sbjct: 999 MSTKVLADVVEALIGASYIDGGFAAAHACIH--RFLPEVNLENIDRTTAPMPK------- 1049
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
G+ + L I YTF +KS L+++L+HP+ + T SYQRLEFLGDA++D
Sbjct: 1050 -DGVT--NHTLNDDHLMAHIGYTFTNKSLLVESLTHPSCQFDTTTQSYQRLEFLGDAVLD 1106
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
+ + L + + G ++ I+ A+VN A + + L
Sbjct: 1107 MAIMSTLLSHPREIPQGLMTKIKHAVVNANLLAFFCMEFAL 1147
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 124 FQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIR 183
F ++ A++ P+ + T+YQR EF GD+++ F V+ L+ + G +S+ R
Sbjct: 893 FSSIRHIITAITAPSAQS---LTNYQRYEFFGDSVLKFTVSCQLFFQHPNWHEGYLSEGR 949
Query: 184 SAMVNNVTFASYAVRLDLHKHLLHD--SPRLY 213
+V N A A+ L +++ +PR +
Sbjct: 950 DEIVQNSRLARAALDAGLDAFIMNKMFTPRKW 981
>gi|187477630|ref|YP_785654.1| ribonuclease III [Bordetella avium 197N]
gi|123514189|sp|Q2KWY0.1|RNC_BORA1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|115422216|emb|CAJ48740.1| ribonuclease III [Bordetella avium 197N]
Length = 251
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE R+ + F D++ L QAL+H ++ A +RLEFLGD++++F+V A L+E ++ L
Sbjct: 6 LETRLGHHFGDQALLEQALTHRSHGARH----NERLEFLGDSVLNFVVAAMLFERYAKLD 61
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G++S +R+ +V + A A RL+L +L
Sbjct: 62 EGDLSRVRANLVKQASLADIAQRLELSPYL 91
>gi|328849595|gb|EGF98772.1| hypothetical protein MELLADRAFT_79606 [Melampsora larici-populina
98AG31]
Length = 1540
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 95/176 (53%), Gaps = 18/176 (10%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALN-----ILPQSKIDVHEALYGPHPSA 94
K+ +V++D+VE+L G L S GI+ A+ L+ + P ++ +AL P+P A
Sbjct: 1040 KIPRRVLSDIVEALLGAGLLSGGIQTALKIGTELDLCFGGVTPWTERPC-KALDEPYPDA 1098
Query: 95 VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFL 154
++ T L+ +I Y F+ L+QAL+H + ++ +T Y+R E+L
Sbjct: 1099 ASS----------QWTKSHTALQHKIGYEFKQPLLLMQALTHRSADSF-LTNCYEREEWL 1147
Query: 155 GDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAV-RLDLHKHLLHDS 209
GDAI+D +T + Y FS + +++ R+++V N + ++ +L LHK + HDS
Sbjct: 1148 GDAIVDLWITEHCYRRFSDSTAAQLTFTRASLVTNASLGYLSLKKLGLHKMIQHDS 1203
>gi|311104757|ref|YP_003977610.1| ribonuclease III [Achromobacter xylosoxidans A8]
gi|310759446|gb|ADP14895.1| ribonuclease III [Achromobacter xylosoxidans A8]
Length = 253
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE R+++ F D + L QAL+H ++ A +RLEFLGD++++F+V A L+E +S +
Sbjct: 6 LENRLDHHFSDPALLEQALTHRSHGARH----NERLEFLGDSVLNFVVAAMLFERYSKID 61
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G++S +R+ +V + A A RL+L ++L
Sbjct: 62 EGDLSRLRANLVKQASLADIAQRLELSQYL 91
>gi|167046032|gb|ABZ10547.1| dicer-like protein E [Trichoplax adhaerens]
Length = 359
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 105/245 (42%), Gaps = 29/245 (11%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L K +AD VE L G CG + F++ L ++ E L G E
Sbjct: 109 LTKKAIADCVEGLIGYLCLVCGRNSVLRFMRWLGF------EISECLDGIQ-------EL 155
Query: 101 ARGLD--PLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAI 158
+D Y +E +NY+F+++S L+ AL+H +Y+ + SY++L FLGD +
Sbjct: 156 IPSIDFRTNLYSETANSVETILNYSFRNRSLLMLALTHKSYSGLE-SISYEKLAFLGDTL 214
Query: 159 IDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTR 218
+ + + +LY ++ P + + + N + A+ DL K LLH S L +
Sbjct: 215 LIYQICLFLYTQYTDYQPKDYHLLLEYLTCNRMYGIVAIASDLCKFLLHKSRELTLQIDE 274
Query: 219 FAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDV 278
Q EA + + + + L L+E+ ++ VPK LGD
Sbjct: 275 IYQALEADDVQSFSSTVQSGCSYKMKTTL---LLEKLSIEQ----------FVPKELGDT 321
Query: 279 FEALV 283
F A+V
Sbjct: 322 FAAVV 326
>gi|387825113|ref|YP_005824584.1| Ribonuclease III [Francisella cf. novicida 3523]
gi|332184579|gb|AEE26833.1| Ribonuclease III [Francisella cf. novicida 3523]
Length = 230
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 66/115 (57%), Gaps = 12/115 (10%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+PE ++ + Y F+D + L++AL+H + + +Y+RLEFLGD+++ F++ LY+
Sbjct: 2 VPEYSRFYNILGYKFKDYTLLIRALTHRS----KTKKNYERLEFLGDSVLSFVIAEVLYK 57
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL--------HDSPRLYENV 216
F+ L G++S +RS +V T A A L + ++++ H ++ E+V
Sbjct: 58 QFTDLDEGKLSQLRSKLVKGATLAQLASSLKMDEYIILGASEQGGHKREKILEDV 112
>gi|310794641|gb|EFQ30102.1| RNase3 domain-containing protein [Glomerella graminicola M1.001]
Length = 1447
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 93/192 (48%), Gaps = 24/192 (12%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAM----LFLQALNILPQSKIDVHE-ALYGPHPSA 94
K+ K +AD+VE+L G + G++ A+ +FLQ +N +D ALY P
Sbjct: 1076 KMSTKTLADIVEALIGASMIDGGLDKALKCMSIFLQQIN---WRTLDACRLALYNFSPPD 1132
Query: 95 VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFL 154
V P L+PL ++ I Y F K+ L+QA++H ++N +RLEF+
Sbjct: 1133 VELPST---LEPLEHL---------IGYKFDRKTLLIQAMTHASFNLGNPFGCLERLEFM 1180
Query: 155 GDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYE 214
GD+++D++V L+ L + +++AMVN F + L L + + D L E
Sbjct: 1181 GDSVLDYVVVNRLFAVEPPLPHQTMHLLKTAMVNG-DFLGF---LSLEQSIGQDEVVLGE 1236
Query: 215 NVTRFAQNQEAR 226
N + Q +R
Sbjct: 1237 NTGKEPNLQHSR 1248
Score = 39.3 bits (90), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 49/88 (55%), Gaps = 11/88 (12%)
Query: 123 TFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGE---- 178
D S +L A+S T +A+ T+Y+R+EFLGD+I+ F T N + L+P
Sbjct: 968 AISDLSLILTAIS--TGSASE-PTNYERIEFLGDSILKFSATI----NVAALNPQWPERL 1020
Query: 179 ISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+S + A+V+N T AV+ L +++L
Sbjct: 1021 LSFHKDAIVSNSTLCKAAVKHGLDRYIL 1048
>gi|62258114|gb|AAX77768.1| unknown protein [synthetic construct]
Length = 265
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 61/100 (61%), Gaps = 4/100 (4%)
Query: 107 LRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAY 166
L +PE ++ + Y F+D + L++AL+H + + +Y+RLEFLGD+++ F++
Sbjct: 25 LEMVPEYSRFYNILGYNFKDYTLLIRALTHRS----KTKKNYERLEFLGDSVLSFVIAEV 80
Query: 167 LYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
LY+ F L+ G++S +RS +V T A A L + ++++
Sbjct: 81 LYKQFIDLAEGKLSQLRSKLVKGATLAQLASSLKMDEYII 120
>gi|158706449|sp|A2R345.2|DCL21_ASPNC RecName: Full=Dicer-like protein 2-1; Includes: RecName:
Full=Endoribonuclease dcl2-1; Includes: RecName:
Full=ATP-dependent helicase dcl2-1
Length = 1387
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+ KV+ADVVE+L G G A + LP+ ++ + P P
Sbjct: 1034 MSTKVLADVVEALIGASYIDGGFAAAHACIH--RFLPEVNLENIDRTTAPMPK------- 1084
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
G+ + L I YTF +KS L+++L+HP+ + T SYQRLEFLGDA++D
Sbjct: 1085 -DGVT--NHTLNDDHLMAHIGYTFTNKSLLVESLTHPSCQFDTTTQSYQRLEFLGDAVLD 1141
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
+ + L + + G ++ I+ A+VN A + + L
Sbjct: 1142 MAIMSTLLSHPREIPQGLMTKIKHAVVNANLLAFFCMEFAL 1182
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 124 FQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIR 183
F ++ A++ P+ + T+YQR EF GD+++ F V+ L+ + G +S+ R
Sbjct: 928 FSSIRHIITAITAPSAQS---LTNYQRYEFFGDSVLKFTVSCQLFFQHPNWHEGYLSEGR 984
Query: 184 SAMVNNVTFASYAVRLDLHKHLLHD--SPRLY 213
+V N A A+ L +++ +PR +
Sbjct: 985 DEIVQNSRLARAALDAGLDAFIMNKMFTPRKW 1016
>gi|350639413|gb|EHA27767.1| hypothetical protein ASPNIDRAFT_211065 [Aspergillus niger ATCC 1015]
Length = 1372
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+ KV+ADVVE+L G G A + LP+ ++ + P P
Sbjct: 1019 MSTKVLADVVEALIGASYIDGGFAAAHACIH--RFLPEVNLENIDRTTAPMPK------- 1069
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
G+ + L I YTF +KS L+++L+HP+ + T SYQRLEFLGDA++D
Sbjct: 1070 -DGVT--NHTLNDDHLMAHIGYTFTNKSLLVESLTHPSCQFDTTTQSYQRLEFLGDAVLD 1126
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
+ + L + + G ++ I+ A+VN A + + L
Sbjct: 1127 MAIMSTLLSHPREIPQGLMTKIKHAVVNANLLAFFCMEFAL 1167
Score = 40.0 bits (92), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 124 FQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIR 183
F ++ A++ P+ + T+YQR EF GD+++ F V+ L+ + G +S+ R
Sbjct: 913 FSSIRHIITAITAPSAQS---LTNYQRYEFFGDSVLKFTVSCQLFFQHPNWHEGYLSEGR 969
Query: 184 SAMVNNVTFASYAVRLDLHKHLLHD--SPRLY 213
+V N A A+ L +++ +PR +
Sbjct: 970 DEIVQNSRLARAALDAGLDAFIMNKMFTPRKW 1001
>gi|149374709|ref|ZP_01892483.1| ribonuclease III [Marinobacter algicola DG893]
gi|149361412|gb|EDM49862.1| ribonuclease III [Marinobacter algicola DG893]
Length = 229
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 56/95 (58%), Gaps = 4/95 (4%)
Query: 111 PECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYEN 170
P+ QL++RI Y F+ LL AL+H ++ + +RLEFLGD+I++ ++ YLY +
Sbjct: 5 PDLEQLQRRIGYQFKTPERLLLALTHRSFG----NQNNERLEFLGDSIVNMVIAEYLYLH 60
Query: 171 FSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
F G++S +R+ MV VT A +L K+L
Sbjct: 61 FEKAREGQLSRLRARMVKGVTLAEIGREFELGKYL 95
>gi|269468620|gb|EEZ80264.1| dsRNA-specific ribonuclease [uncultured SUP05 cluster bacterium]
Length = 221
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 60/98 (61%), Gaps = 4/98 (4%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+LE++I+Y F+D S L AL+H + N + +RLEFLGD+I+ +++ LY+ F+H+
Sbjct: 3 KLEQKIDYQFKDISLLKLALTHRSVGKN----NNERLEFLGDSILGLVISRELYKRFTHV 58
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +RS +V T A A LDL L+ S L
Sbjct: 59 DEGKLSRLRSHLVRGQTLAQLASTLDLSNILILGSGEL 96
>gi|373867394|ref|ZP_09603792.1| Ribonuclease III [Sulfurimonas gotlandica GD1]
gi|372469495|gb|EHP29699.1| Ribonuclease III [Sulfurimonas gotlandica GD1]
Length = 226
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE + YTF+DK +++AL+H +Y + +RLEFLGDA++D +V YL+ F
Sbjct: 8 LENTLGYTFKDKQLIIEALTHKSY---KQPYDNERLEFLGDAVLDLIVGEYLFTKFKKSD 64
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G +S IR+++VN F A L+L +++
Sbjct: 65 EGNLSKIRASLVNETGFDKLARSLNLGEYIF 95
>gi|346970337|gb|EGY13789.1| RNase3 domain-containing protein [Verticillium dahliae VdLs.17]
Length = 1563
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 88/181 (48%), Gaps = 27/181 (14%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKI-------DVHEALYGP-- 90
L DK +ADV E++ G S EG + ++A+ + ++K D ++A P
Sbjct: 1200 LADKSIADVCEAIIGASYLSYTDEGNFDMAVRAVTAVVRNKNHDMKSYEDYYKAFKMPIW 1259
Query: 91 ---HPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNAN-RITT 146
PSAV+ + Q+++++ Y F+ + L A HP+Y
Sbjct: 1260 QAAEPSAVQ-------------MEASLQIKEQMGYEFKSPALLRSAFKHPSYPRQFESVP 1306
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+YQRLEFLGDA++D + +L+ F P +++ + AMV+N S +V L ++ +L
Sbjct: 1307 NYQRLEFLGDALLDMVCVDFLFRKFPDADPQWLTEHKMAMVSNHFLGSLSVELGFYRRVL 1366
Query: 207 H 207
H
Sbjct: 1367 H 1367
>gi|254785337|ref|YP_003072766.1| ribonuclease III [Teredinibacter turnerae T7901]
gi|237684548|gb|ACR11812.1| ribonuclease III [Teredinibacter turnerae T7901]
Length = 229
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 112 ECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+ QL K +NYTF D S L +ALSH + +N + +RLEFLGD++++FL+ LY+ F
Sbjct: 8 KLNQLSKALNYTFSDISLLEKALSHRSVGSN----NNERLEFLGDSLLNFLIAENLYQRF 63
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G++S +R+++V T A A DL + L
Sbjct: 64 PKAREGDLSRLRASLVKGETLAELAKDFDLGEFL 97
>gi|223944141|gb|ACN26154.1| unknown [Zea mays]
gi|414870637|tpg|DAA49194.1| TPA: hypothetical protein ZEAMMB73_470563 [Zea mays]
Length = 206
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 1/102 (0%)
Query: 112 ECTQLEKRINYTFQDKSFLLQALSHPT-YNANRITTSYQRLEFLGDAIIDFLVTAYLYEN 170
+ T +E + Y F DKS + AL+H + Y NR +Y+RLE+LGD ++ L++ ++
Sbjct: 47 DVTAIEALLGYCFIDKSLVELALTHGSFYWPNRPGDTYERLEYLGDGVLTCLMSREVFRT 106
Query: 171 FSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
+ L PG ++ +R+A V+ A AV LH+ L H +P+L
Sbjct: 107 YRTLQPGPLTRLRAANVDTEKLARVAVHRGLHRFLRHKAPKL 148
>gi|340378479|ref|XP_003387755.1| PREDICTED: ribonuclease 3-like [Amphimedon queenslandica]
Length = 349
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 17/174 (9%)
Query: 43 DKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQAR 102
+ + A+ +E+L G + I + + L L + P+ E L G S + Q
Sbjct: 48 NHIYANTLEALIGAVYKDSDINTSSIVLATL-LFPE------EDLRGIWLSEYKDQLQVD 100
Query: 103 GLD---------PLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTS-YQRLE 152
D P+ + +LE+ I F + L +A +HP+Y + YQR+E
Sbjct: 101 STDGDRHMVNEYPILNVISFNKLEESIGVRFTNIRLLARAFTHPSYGCTDLLIGDYQRME 160
Query: 153 FLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
FLGDAI+ FL + Y+Y+ F G +S R+A+V+N A +V L +HLL
Sbjct: 161 FLGDAILQFLTSDYVYDTFPLHHEGHLSTFRTAIVHNKQLAEVSVELGFPQHLL 214
>gi|317035030|ref|XP_001400925.2| ATP-dependent helicase dcl2 [Aspergillus niger CBS 513.88]
Length = 1407
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 77/161 (47%), Gaps = 12/161 (7%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+ KV+ADVVE+L G G A + LP+ ++ + P P
Sbjct: 1034 MSTKVLADVVEALIGASYIDGGFAAAHACIH--RFLPEVNLENIDRTTAPMPK------- 1084
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
G+ + L I YTF +KS L+++L+HP+ + T SYQRLEFLGDA++D
Sbjct: 1085 -DGVT--NHTLNDDHLMAHIGYTFTNKSLLVESLTHPSCQFDTTTQSYQRLEFLGDAVLD 1141
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
+ + L + + G ++ I+ A+VN A + + L
Sbjct: 1142 MAIMSTLLSHPREIPQGLMTKIKHAVVNANLLAFFCMEFAL 1182
Score = 40.0 bits (92), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/92 (26%), Positives = 46/92 (50%), Gaps = 5/92 (5%)
Query: 124 FQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIR 183
F ++ A++ P+ + T+YQR EF GD+++ F V+ L+ + G +S+ R
Sbjct: 928 FSSIRHIITAITAPSAQS---LTNYQRYEFFGDSVLKFTVSCQLFFQHPNWHEGYLSEGR 984
Query: 184 SAMVNNVTFASYAVRLDLHKHLLHD--SPRLY 213
+V N A A+ L +++ +PR +
Sbjct: 985 DEIVQNSRLARAALDAGLDAFIMNKMFTPRKW 1016
>gi|227484649|ref|ZP_03914965.1| ribonuclease III [Anaerococcus lactolyticus ATCC 51172]
gi|227237369|gb|EEI87384.1| ribonuclease III [Anaerococcus lactolyticus ATCC 51172]
Length = 237
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 57/93 (61%), Gaps = 2/93 (2%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTY-NANRITT-SYQRLEFLGDAIIDFLVTAYLYENFS 172
+ EK I YTF DK+ + A +H ++ N RI T S +RLEFLGD I+D +V+ YL++N+
Sbjct: 13 EFEKSIGYTFNDKTLIDVAFTHSSFTNEARIKTKSNERLEFLGDTILDMVVSEYLFKNYK 72
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G ++ RS +V +FA + DL K+L
Sbjct: 73 EKPEGWLTRTRSRIVCTDSFAKACEKFDLTKYL 105
>gi|390941207|ref|YP_006404944.1| ribonuclease III [Sulfurospirillum barnesii SES-3]
gi|390194314|gb|AFL69369.1| ribonuclease III [Sulfurospirillum barnesii SES-3]
Length = 227
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 59/86 (68%), Gaps = 3/86 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
L+KR+ Y F++++ +++AL+H + ++ + +RLEFLGDA++D +V YLY F+ ++
Sbjct: 8 LQKRLGYQFKNQNLIIEALTHKS---SKQPYNNERLEFLGDAVLDLIVGEYLYHEFTEVA 64
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDL 201
GE+S +R+++VN +F A L L
Sbjct: 65 EGELSKLRASLVNEKSFEKLARLLHL 90
>gi|195996297|ref|XP_002108017.1| hypothetical protein TRIADDRAFT_52064 [Trichoplax adhaerens]
gi|190588793|gb|EDV28815.1| hypothetical protein TRIADDRAFT_52064 [Trichoplax adhaerens]
Length = 707
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 105/245 (42%), Gaps = 29/245 (11%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L K +AD VE L G CG + F++ L ++ E L G E
Sbjct: 379 LTKKAIADCVEGLIGYLCLVCGRNSVLRFMRWLGF------EISECLDGIQ-------EL 425
Query: 101 ARGLD--PLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAI 158
+D Y +E +NY+F+++S L+ AL+H +Y+ + SY++L FLGD +
Sbjct: 426 IPSIDFRTNLYSETANSVETILNYSFRNRSLLMLALTHKSYSGLE-SISYEKLAFLGDTL 484
Query: 159 IDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTR 218
+ + + +LY ++ P + + + N + A+ DL K LLH S L +
Sbjct: 485 LIYQICLFLYTQYTDYQPKDYHLLLEYLTCNRMYGIVAIASDLCKFLLHKSRELTLQIDE 544
Query: 219 FAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDV 278
Q EA + + + + L L+E+ ++ VPK LGD
Sbjct: 545 IYQALEADDVQSFSSTVQSGCSYKMKTTL---LLEKLSIEQ----------FVPKELGDT 591
Query: 279 FEALV 283
F A+V
Sbjct: 592 FAAVV 596
>gi|94502127|ref|ZP_01308628.1| ribonuclease III [Bermanella marisrubri]
gi|94425729|gb|EAT10736.1| ribonuclease III [Oceanobacter sp. RED65]
Length = 226
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 55/98 (56%), Gaps = 4/98 (4%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+L +RI YTF D SF AL+H + + +RLEFLGD+I++F+V L+E F
Sbjct: 7 KLSQRIGYTFNDISFFELALTHRSKGGK----NNERLEFLGDSIVNFVVAEALFEKFPQA 62
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A DL + LL S L
Sbjct: 63 KEGKLSRLRAGLVRGTTLAELARDFDLGEFLLLGSGEL 100
>gi|422323120|ref|ZP_16404160.1| ribonuclease 3 [Achromobacter xylosoxidans C54]
gi|317401886|gb|EFV82493.1| ribonuclease 3 [Achromobacter xylosoxidans C54]
Length = 253
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE R+++ F D + L QAL+H ++ A +RLEFLGD++++F+V A L+E +S +
Sbjct: 6 LENRLDHHFGDPALLEQALTHRSHGARH----NERLEFLGDSVLNFVVAAMLFERYSKID 61
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G++S +R+ +V + A A RL+L ++L
Sbjct: 62 EGDLSRLRANLVKQASLADIAQRLELSQYL 91
>gi|379713230|ref|YP_005301568.1| ribonuclease III [Rickettsia massiliae str. AZT80]
gi|376333876|gb|AFB31108.1| ribonuclease III [Rickettsia massiliae str. AZT80]
Length = 227
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPT---YNANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+LEK ++Y+F++K L++ALSHP+ ++ + Y+RLEFLGDA+++ ++T L+ NF
Sbjct: 6 KLEKLLSYSFKNKELLIEALSHPSLRQHHEYKDDKDYERLEFLGDAVLNLVITEILFRNF 65
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
++ + G ++ IRS +V T +L L +++
Sbjct: 66 ANYNEGHLAKIRSYLVCKETICMVGAKLTLKNYII 100
>gi|383483498|ref|YP_005392411.1| ribonuclease III [Rickettsia parkeri str. Portsmouth]
gi|378935852|gb|AFC74352.1| ribonuclease III [Rickettsia parkeri str. Portsmouth]
Length = 227
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPT---YNANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+LEK ++Y+F++K L++ALSHP+ ++ + Y+RLEFLGDA+++ ++T L+ NF
Sbjct: 6 KLEKLLSYSFKNKELLIEALSHPSLRQHHEYKDDKDYERLEFLGDAVLNLVITEILFRNF 65
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
++ + G ++ IRS +V T +L L +++
Sbjct: 66 ANYNEGNLAKIRSYLVCKETICMVGAKLTLKNYII 100
>gi|293604014|ref|ZP_06686427.1| ribonuclease III [Achromobacter piechaudii ATCC 43553]
gi|292817618|gb|EFF76686.1| ribonuclease III [Achromobacter piechaudii ATCC 43553]
Length = 253
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE R+++ F D + L QAL+H ++ A +RLEFLGD++++F+V A L+E +S +
Sbjct: 6 LENRLDHHFGDPALLEQALTHRSHGARH----NERLEFLGDSVLNFVVAAMLFERYSKID 61
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G++S +R+ +V + A A RL+L ++L
Sbjct: 62 EGDLSRLRANLVKQASLADIAQRLELSQYL 91
>gi|34580889|ref|ZP_00142369.1| ribonuclease III [Rickettsia sibirica 246]
gi|157828029|ref|YP_001494271.1| ribonuclease III [Rickettsia rickettsii str. 'Sheila Smith']
gi|165932727|ref|YP_001649516.1| ribonuclease III [Rickettsia rickettsii str. Iowa]
gi|229586355|ref|YP_002844856.1| ribonuclease III [Rickettsia africae ESF-5]
gi|374318897|ref|YP_005065395.1| Ribonuclease III [Rickettsia slovaca 13-B]
gi|378720829|ref|YP_005285716.1| ribonuclease III [Rickettsia rickettsii str. Colombia]
gi|378722183|ref|YP_005287069.1| ribonuclease III [Rickettsia rickettsii str. Arizona]
gi|378723541|ref|YP_005288425.1| ribonuclease III [Rickettsia rickettsii str. Hauke]
gi|379016909|ref|YP_005293144.1| ribonuclease III [Rickettsia rickettsii str. Brazil]
gi|379017329|ref|YP_005293563.1| ribonuclease III [Rickettsia rickettsii str. Hino]
gi|379018660|ref|YP_005294894.1| ribonuclease III [Rickettsia rickettsii str. Hlp#2]
gi|379711897|ref|YP_005300236.1| ribonuclease III [Rickettsia philipii str. 364D]
gi|383312125|ref|YP_005364926.1| ribonuclease III [Candidatus Rickettsia amblyommii str. GAT-30V]
gi|383750794|ref|YP_005425895.1| ribonuclease III [Rickettsia slovaca str. D-CWPP]
gi|166991034|sp|A8GQT8.1|RNC_RICRS RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|189043343|sp|B0BW84.1|RNC_RICRO RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|259646551|sp|C3PMF3.1|RNC_RICAE RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|28262274|gb|EAA25778.1| ribonuclease III [Rickettsia sibirica 246]
gi|157800510|gb|ABV75763.1| ribonuclease III [Rickettsia rickettsii str. 'Sheila Smith']
gi|165907814|gb|ABY72110.1| ribonuclease III [Rickettsia rickettsii str. Iowa]
gi|228021405|gb|ACP53113.1| Ribonuclease III [Rickettsia africae ESF-5]
gi|360041445|gb|AEV91827.1| Ribonuclease III [Rickettsia slovaca 13-B]
gi|376325433|gb|AFB22673.1| ribonuclease III [Rickettsia rickettsii str. Brazil]
gi|376325853|gb|AFB23092.1| ribonuclease III [Rickettsia rickettsii str. Colombia]
gi|376327207|gb|AFB24445.1| ribonuclease III [Rickettsia rickettsii str. Arizona]
gi|376328542|gb|AFB25779.1| ribonuclease III [Rickettsia philipii str. 364D]
gi|376329894|gb|AFB27130.1| ribonuclease III [Rickettsia rickettsii str. Hino]
gi|376331240|gb|AFB28474.1| ribonuclease III [Rickettsia rickettsii str. Hlp#2]
gi|376332556|gb|AFB29789.1| ribonuclease III [Rickettsia rickettsii str. Hauke]
gi|378930785|gb|AFC69294.1| ribonuclease III [Candidatus Rickettsia amblyommii str. GAT-30V]
gi|379773808|gb|AFD19164.1| ribonuclease III [Rickettsia slovaca str. D-CWPP]
Length = 227
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPT---YNANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+LEK ++Y+F++K L++ALSHP+ ++ + Y+RLEFLGDA+++ ++T L+ NF
Sbjct: 6 KLEKLLSYSFKNKELLIEALSHPSLRQHHEYKDDKDYERLEFLGDAVLNLVITEILFRNF 65
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
++ + G ++ IRS +V T +L L +++
Sbjct: 66 ANYNEGNLAKIRSYLVCKETICMVGAKLTLKNYII 100
>gi|341583383|ref|YP_004763874.1| ribonuclease III [Rickettsia heilongjiangensis 054]
gi|340807609|gb|AEK74197.1| ribonuclease III [Rickettsia heilongjiangensis 054]
Length = 227
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPT---YNANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+LEK ++Y+F++K L++ALSHP+ ++ + Y+RLEFLGDA+++ ++T L+ NF
Sbjct: 6 KLEKLLSYSFKNKELLIEALSHPSLRQHHEYKDDKDYERLEFLGDAVLNLVITEILFRNF 65
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
++ + G ++ IRS +V T +L L +++
Sbjct: 66 ANYNEGNLAKIRSYLVCKETICMVGAKLTLKNYII 100
>gi|238650709|ref|YP_002916562.1| ribonuclease III [Rickettsia peacockii str. Rustic]
gi|259646552|sp|C4K1R3.1|RNC_RICPU RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|238624807|gb|ACR47513.1| ribonuclease III [Rickettsia peacockii str. Rustic]
Length = 227
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPT---YNANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+LEK ++Y+F++K L++ALSHP+ ++ + Y+RLEFLGDA+++ ++T L+ NF
Sbjct: 6 KLEKLLSYSFKNKELLIEALSHPSLRQHHEYKDDKDYERLEFLGDAVLNLVITEILFRNF 65
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
++ + G ++ IRS +V T +L L +++
Sbjct: 66 ANYNEGNLAKIRSYLVCKETICMVGAKLTLKNYII 100
>gi|336378007|gb|EGO19166.1| hypothetical protein SERLADRAFT_443209 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1489
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 19/190 (10%)
Query: 40 KLGDKVVADVVESLTGVYLR----SCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAV 95
+L K++ADVVESL G GIE A F L +K V AL S V
Sbjct: 1136 ELSTKMLADVVESLIGAAYEHGGFDLGIECAKFFGLGLEWWGLAKC-VETAL-----SVV 1189
Query: 96 RCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLG 155
+ + + T +E + Y F K L++AL+H ++ + T SY+R+EFLG
Sbjct: 1190 ETTDD--------FPAQVTDVELMLGYNFTRKLLLIEALTHASHQFDTRTVSYERMEFLG 1241
Query: 156 DAIIDFLVTAYLYE-NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYE 214
D+I+D ++T YLY SPG + +S++VN A +R L P
Sbjct: 1242 DSILDMIITDYLYHVPGKGYSPGHMHMRKSSVVNTHFLAFICLRNSLKVDTSMPGPNHEG 1301
Query: 215 NVTRFAQNQE 224
+T Q+QE
Sbjct: 1302 RITLNTQSQE 1311
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 10/121 (8%)
Query: 129 FLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
L AL+ P +Y+RLE LGD ++ F+V+ +L F H G ++ + V+
Sbjct: 1019 LLTTALTAPVSQG---LINYERLETLGDGVLKFIVSIHLMAAFPHWHEGYLTRRKDHGVS 1075
Query: 189 NVTFASYAVRLDLHKHLLHD--SPRLYENVTRFA---QNQEARNHEISDEEEEEEEEEGI 243
N A AV L++ ++ D +PR + R+ QN++ E+ E + + +
Sbjct: 1076 NAQLAKNAVLKKLYRWIIRDRFTPRKW--TPRYCTPPQNEDQIKEEVEVEGSDSRKSRAV 1133
Query: 244 V 244
+
Sbjct: 1134 I 1134
>gi|336365445|gb|EGN93795.1| hypothetical protein SERLA73DRAFT_115225 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1493
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 19/190 (10%)
Query: 40 KLGDKVVADVVESLTGVYLR----SCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAV 95
+L K++ADVVESL G GIE A F L +K V AL S V
Sbjct: 1140 ELSTKMLADVVESLIGAAYEHGGFDLGIECAKFFGLGLEWWGLAKC-VETAL-----SVV 1193
Query: 96 RCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLG 155
+ + + T +E + Y F K L++AL+H ++ + T SY+R+EFLG
Sbjct: 1194 ETTDD--------FPAQVTDVELMLGYNFTRKLLLIEALTHASHQFDTRTVSYERMEFLG 1245
Query: 156 DAIIDFLVTAYLYE-NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYE 214
D+I+D ++T YLY SPG + +S++VN A +R L P
Sbjct: 1246 DSILDMIITDYLYHVPGKGYSPGHMHMRKSSVVNTHFLAFICLRNSLKVDTSMPGPNHEG 1305
Query: 215 NVTRFAQNQE 224
+T Q+QE
Sbjct: 1306 RITLNTQSQE 1315
Score = 46.2 bits (108), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 57/121 (47%), Gaps = 10/121 (8%)
Query: 129 FLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
L AL+ P +Y+RLE LGD ++ F+V+ +L F H G ++ + V+
Sbjct: 1023 LLTTALTAPVSQG---LINYERLETLGDGVLKFIVSIHLMAAFPHWHEGYLTRRKDHGVS 1079
Query: 189 NVTFASYAVRLDLHKHLLHD--SPRLYENVTRFA---QNQEARNHEISDEEEEEEEEEGI 243
N A AV L++ ++ D +PR + R+ QN++ E+ E + + +
Sbjct: 1080 NAQLAKNAVLKKLYRWIIRDRFTPRKW--TPRYCTPPQNEDQIKEEVEVEGSDSRKSRAV 1137
Query: 244 V 244
+
Sbjct: 1138 I 1138
>gi|367055364|ref|XP_003658060.1| hypothetical protein THITE_2033760, partial [Thielavia terrestris
NRRL 8126]
gi|347005326|gb|AEO71724.1| hypothetical protein THITE_2033760, partial [Thielavia terrestris
NRRL 8126]
Length = 1118
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 73/152 (48%), Gaps = 18/152 (11%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM----LFLQALNILPQSKIDVHEALYGPHPSAVR 96
L K +ADVVE+L S GI A+ LFL +S E LY P
Sbjct: 962 LSTKTLADVVEALIAASYISGGIPKALACMSLFLPEFEW--KSIEQGREILYNEAPHDEP 1019
Query: 97 CPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGD 156
P R L+ L I YTF K+ L++A++HP+ I S RLEFLGD
Sbjct: 1020 LPVTMRPLESL------------IGYTFTKKALLVEAMTHPSCTGPGIRASLDRLEFLGD 1067
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
AI+D++V L+ + + L + +R+A+VN
Sbjct: 1068 AILDYIVVNRLFSDPAGLDNSTLHLLRTALVN 1099
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 4/100 (4%)
Query: 116 LEKRINYT-FQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
LE R+ T D S ++ A+S +A R T Y+R+EFLGD+I+ F T +
Sbjct: 844 LESRLERTGITDLSLVVMAIS---TSAARGPTDYERIEFLGDSILKFCTTINCAAKYLKY 900
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYE 214
G +S ++ +V+N AV L ++++H + L++
Sbjct: 901 PEGCLSPLKDKIVSNSRLFRAAVEFGLDRYIVHKTLTLHK 940
>gi|325677853|ref|ZP_08157495.1| ribonuclease III [Ruminococcus albus 8]
gi|324110407|gb|EGC04581.1| ribonuclease III [Ruminococcus albus 8]
Length = 232
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 62/95 (65%), Gaps = 2/95 (2%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTY-NANRITT-SYQRLEFLGDAIIDFLVTAYLYENF 171
+ +KRI Y+F++ L +ALSH ++ N N+ S +RLEFLGD+++ +V+ Y++E+F
Sbjct: 8 AEFQKRIGYSFKNDRLLYEALSHSSFANENKKQRHSNERLEFLGDSVLSIVVSDYIFEHF 67
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
HL GE++ +R+++V ++ + +L K++
Sbjct: 68 KHLPEGELTKLRASLVCEKALFEFSHKFELGKYIF 102
>gi|453081348|gb|EMF09397.1| dicer-like protein 1 [Mycosphaerella populorum SO2202]
Length = 1541
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 65/257 (25%), Positives = 97/257 (37%), Gaps = 50/257 (19%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLF------LQALNILPQSKI-------DVHEAL 87
LG+K +ADV E+L G + GA ++A+ L S D A
Sbjct: 1166 LGEKTIADVCEALIGAAYLTWDQPGAWQAEHWTNAVKAVTTLVDSDDHRMLTWDDYRTAY 1225
Query: 88 YGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYN-ANRITT 146
PH R L ++E+ Y F+ L A HP+ N
Sbjct: 1226 SKPHYQTAEATAVQRDL--------AQKVEREHAYRFKYPRLLYSAFMHPSVPYINEKVP 1277
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+YQRLEFLGDA++D +L+ + P +++ + AMV+N + V + HKHL
Sbjct: 1278 NYQRLEFLGDALLDQASITWLFNKYPDKDPQWLTEHKMAMVSNKFLGAVCVNIGFHKHLR 1337
Query: 207 HDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVV 266
H L +T +A + L+E K + D
Sbjct: 1338 HYHAVLQSQITAYAAD----------------------------LMEAKRIAGDSRDYWT 1369
Query: 267 EYVDVPKALGDVFEALV 283
D PK L D+ EA +
Sbjct: 1370 TVSDPPKCLPDIVEAYI 1386
>gi|15892080|ref|NP_359794.1| ribonuclease III [Rickettsia conorii str. Malish 7]
gi|22654066|sp|Q92JB0.1|RNC_RICCN RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|15619202|gb|AAL02695.1| ribonuclease III [Rickettsia conorii str. Malish 7]
Length = 227
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPT---YNANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+LEK ++Y+F++K L++ALSHP+ ++ + Y+RLEFLGDA+++ ++T L+ NF
Sbjct: 6 KLEKLLSYSFKNKELLIEALSHPSLRQHHEYKDDKDYERLEFLGDAVLNLVITEILFRNF 65
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
++ + G ++ IRS +V T +L L +++
Sbjct: 66 ANYNEGNLAKIRSYLVCKETICMVGAKLTLKNYII 100
>gi|407917735|gb|EKG11039.1| Ribonuclease III [Macrophomina phaseolina MS6]
Length = 1216
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 77/156 (49%), Gaps = 38/156 (24%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L K +ADVVESL G + IEG M P++ + + L P CP
Sbjct: 771 LSSKTLADVVESLIG----AAYIEGGM---------PKANLCIATLL----PKLSWCP-- 811
Query: 101 ARGLDPLRYI--------------PECTQLEKRINYTFQDKSFLLQALSHPTYNANR--I 144
LD R+I + E+ I YTF++K LL+AL+HP++ + R
Sbjct: 812 ---LDESRHILAKHAAEDHISAPPIHLERAEELIGYTFKNKYLLLEALTHPSFTSYRDAT 868
Query: 145 TTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEIS 180
T+SYQRLEFLGDA++D+L++ L+ LS S
Sbjct: 869 TSSYQRLEFLGDAVLDYLISRRLHAYRKPLSADSTS 904
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 42/83 (50%), Gaps = 4/83 (4%)
Query: 124 FQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIR 183
F++ +L+A++ + N N YQRLEFLGD I+ F L H +++ +
Sbjct: 662 FENYEMVLRAITASSTNEN----DYQRLEFLGDCILKFNTAVQLMAGNLHWPESYLTEKK 717
Query: 184 SAMVNNVTFASYAVRLDLHKHLL 206
+V+N + A + R L + ++
Sbjct: 718 DRVVSNGSLAKASRRAGLDRFII 740
>gi|119478976|ref|XP_001259517.1| RNase3 domain protein [Neosartorya fischeri NRRL 181]
gi|158706438|sp|A1DE13.1|DCL1_NEOFI RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
gi|119407671|gb|EAW17620.1| RNase3 domain protein [Neosartorya fischeri NRRL 181]
Length = 1538
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 93/198 (46%), Gaps = 16/198 (8%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEG----AMLFLQALNILPQSKIDVHEALYGPHPSAVR 96
LG+K +ADV E+L G L S G E A + AL P ++ + +
Sbjct: 1182 LGEKTIADVCEALIGASLLSGGPENRFDMATKAVTALVDSPSHRVSCWKEYITLYTMPKY 1241
Query: 97 CPEQARGL--DPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNAN---RITTSYQRL 151
E+ RG D R++ E+ + Y F L A++HP+ + R+ YQRL
Sbjct: 1242 QTEKPRGSEDDLARHV------EEELGYHFTYPRLLASAITHPSLPSTWGYRVPC-YQRL 1294
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPR 211
EFLGD+++D + L+ F P +++ + AMV+N + +V+L H+ ++ S
Sbjct: 1295 EFLGDSLLDMVCVEDLFRRFPDRDPQWLTEHKMAMVSNKFLGALSVKLGFHRRIMAFSNP 1354
Query: 212 LYENVTRFAQNQEARNHE 229
L +T + + E+ E
Sbjct: 1355 LQAQITHYVEEIESAQAE 1372
>gi|374997118|ref|YP_004972617.1| ribonuclease III [Desulfosporosinus orientis DSM 765]
gi|357215484|gb|AET70102.1| ribonuclease III [Desulfosporosinus orientis DSM 765]
Length = 261
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 96 RCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLE 152
R + L L+ P +L KR+ AL+HP+Y N + QRLE
Sbjct: 16 RSGRKKFALTSLKLEP-GVKLAKRLELDIPPNRLFTTALTHPSYVFENPQFGKENNQRLE 74
Query: 153 FLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
FLGDAI+DF++ YLY N+ GE++ +R+A+VN T A A ++L + LL
Sbjct: 75 FLGDAILDFVIAEYLYLNYPDRPEGELTKMRAAVVNETTLARKAHEIELGQELL 128
>gi|83772763|dbj|BAE62891.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391869364|gb|EIT78563.1| dsRNA-specific nuclease Dicer [Aspergillus oryzae 3.042]
Length = 1374
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 102/211 (48%), Gaps = 25/211 (11%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKIDVHEAL-YGPHPSAVRCP 98
L +K VADV E+L G L S G+ + ++A+ + S H+AL + + S+ P
Sbjct: 1081 LREKTVADVCEALIGASLLSGGLHNQFDMAVKAVTAVVDSP--NHKALCWADYTSSYMLP 1138
Query: 99 E-QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITT-SYQRLEFLGD 156
+ Q + D + ++E+++ Y F+ L A +HP+Y + YQRLEFLGD
Sbjct: 1139 KYQTQSPDGYE-LDLGRKVEEKLGYRFKYPRLLHSAFTHPSYPSTWAKVPCYQRLEFLGD 1197
Query: 157 AIIDFLVTAYLYENFSHLSPGEISD------------------IRSAMVNNVTFASYAVR 198
+++D + L+ + P +++ ++ AMV+N + AV+
Sbjct: 1198 SLLDMVCVDDLFYRYPDKDPQWLTEHKVSVRLFVSTKHLLTITLQMAMVSNKFLGALAVK 1257
Query: 199 LDLHKHLLHDSPRLYENVTRFAQNQEARNHE 229
L LH HL H S L +T +A+ +A +E
Sbjct: 1258 LGLHTHLRHFSNPLQSQITHYAEEIQAAENE 1288
>gi|409046535|gb|EKM56015.1| hypothetical protein PHACADRAFT_122116 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1496
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 70/123 (56%), Gaps = 10/123 (8%)
Query: 106 PLRY--IPECT------QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
P RY +PE ++++ + Y F+ L++A++HP++ + +SYQRLEF+GDA
Sbjct: 1094 PARYDRLPETPVPVMFHEVQEILGYEFKSGHLLIEAVTHPSFRSP-TNSSYQRLEFMGDA 1152
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVR-LDLHKHLLHDSPRLYENV 216
+ID +V YLY F + G++S RS V A AV L LH+ LL ++ L +
Sbjct: 1153 LIDLVVMRYLYNKFPTATSGQLSWARSRAVCAPALAHIAVNVLGLHRPLLINNIELSMAI 1212
Query: 217 TRF 219
+++
Sbjct: 1213 SKY 1215
Score = 45.8 bits (107), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 5/96 (5%)
Query: 129 FLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
++QAL+ P+ NA + QRLE LGD+++ +L+ F H G++ +R V+
Sbjct: 945 LMIQALTLPSANAG---FNNQRLETLGDSVLKLCTVVHLFNRFPHRHEGQLDILRRNSVS 1001
Query: 189 NVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQE 224
N T + A + L ++L + + + RFA + E
Sbjct: 1002 NRTLLARAKEVMLEQYLTSEPQTM--RIWRFALSGE 1035
>gi|350273169|ref|YP_004884482.1| ribonuclease III [Rickettsia japonica YH]
gi|348592382|dbj|BAK96343.1| ribonuclease III [Rickettsia japonica YH]
Length = 227
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPT---YNANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+LEK ++Y+F++K L++ALSHP+ ++ + Y+RLEFLGDA+++ ++T L+ NF
Sbjct: 6 KLEKLLSYSFKNKELLIEALSHPSLRQHHEYKDDKDYERLEFLGDAVLNLVITEILFRNF 65
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
++ + G ++ IRS +V T +L L +++
Sbjct: 66 ANYNEGNLAKIRSYLVCKETICMVGAKLALKNYII 100
>gi|291288904|ref|YP_003505720.1| ribonuclease III [Denitrovibrio acetiphilus DSM 12809]
gi|290886064|gb|ADD69764.1| ribonuclease III [Denitrovibrio acetiphilus DSM 12809]
Length = 235
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 1/92 (1%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
LE R+ Y F DKS +L+AL+H +Y + + +Y+RLEFLGDA++ +VT YL + +
Sbjct: 13 LEGRLGYHFSDKSIVLEALTHRSYAHEKKNKQNYERLEFLGDAVLQLIVTEYLLDRYKDY 72
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G +S +R V+ + A+ L L +H+L
Sbjct: 73 DEGLLSKLRGYFVSEGFLSRIAIELKLGEHIL 104
>gi|347440705|emb|CCD33626.1| hypothetical protein [Botryotinia fuckeliana]
Length = 984
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 85/186 (45%), Gaps = 5/186 (2%)
Query: 24 SPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKID 82
PE L + + KLGDK VADV E++ G L S +M ++A+ + S D
Sbjct: 589 GPELLRGKTATAPNTHKLGDKSVADVCEAMIGAALLSHHESKSMDNAVRAVTEVVNS--D 646
Query: 83 VHEAL-YGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-N 140
H A+ + + P+ I Q+E + Y F+ L A HP Y
Sbjct: 647 NHNAVVWSDYYKLYEKPKWQTATATAAQIDMARQVEMKHPYHFKHPRLLRSAFIHPAYLF 706
Query: 141 ANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLD 200
YQRLEFLGD+++D +L+ N P +++ + A+V+N + V+L
Sbjct: 707 IYEQIPCYQRLEFLGDSLLDMACVNFLFHNHPTKDPQWLTEHKMAIVSNQFLGALCVKLG 766
Query: 201 LHKHLL 206
HKHLL
Sbjct: 767 FHKHLL 772
>gi|319957798|ref|YP_004169061.1| RNAse iii [Nitratifractor salsuginis DSM 16511]
gi|319420202|gb|ADV47312.1| RNAse III [Nitratifractor salsuginis DSM 16511]
Length = 226
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+LE+R+ Y F++ +++AL+H +Y + + +RLEFLGDA++D +V +L+ F
Sbjct: 6 ELERRLGYEFKNPQLIVEALTHKSY---KKPYNNERLEFLGDAVLDLIVGEFLFHKFPQS 62
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G +S IR+++VN FA+ A +DL +++
Sbjct: 63 DEGVLSKIRASLVNESGFATLARAIDLGRYI 93
>gi|56708583|ref|YP_170479.1| ribonuclease III [Francisella tularensis subsp. tularensis SCHU S4]
gi|110671054|ref|YP_667611.1| ribonuclease III [Francisella tularensis subsp. tularensis FSC198]
gi|254371212|ref|ZP_04987214.1| hypothetical protein FTBG_00981 [Francisella tularensis subsp.
tularensis FSC033]
gi|254875445|ref|ZP_05248155.1| ribonuclease III [Francisella tularensis subsp. tularensis
MA00-2987]
gi|379717813|ref|YP_005306149.1| Ribonuclease III [Francisella tularensis subsp. tularensis TIGB03]
gi|379726416|ref|YP_005318602.1| ribonuclease III [Francisella tularensis subsp. tularensis TI0902]
gi|385795276|ref|YP_005831682.1| Ribonuclease III [Francisella tularensis subsp. tularensis
NE061598]
gi|421756216|ref|ZP_16193139.1| ribonuclease III [Francisella tularensis subsp. tularensis
80700075]
gi|81597132|sp|Q5NER3.1|RNC_FRATT RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|123359364|sp|Q14G66.1|RNC_FRAT1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|54112881|gb|AAV29074.1| NT02FT1862 [synthetic construct]
gi|56605075|emb|CAG46188.1| Ribonuclease III [Francisella tularensis subsp. tularensis SCHU S4]
gi|110321387|emb|CAL09571.1| Ribonuclease III [Francisella tularensis subsp. tularensis FSC198]
gi|151569452|gb|EDN35106.1| hypothetical protein FTBG_00981 [Francisella tularensis subsp.
tularensis FSC033]
gi|254841444|gb|EET19880.1| ribonuclease III [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282159811|gb|ADA79202.1| Ribonuclease III [Francisella tularensis subsp. tularensis
NE061598]
gi|377827865|gb|AFB81113.1| Ribonuclease III [Francisella tularensis subsp. tularensis TI0902]
gi|377829490|gb|AFB79569.1| Ribonuclease III [Francisella tularensis subsp. tularensis TIGB03]
gi|409085306|gb|EKM85451.1| ribonuclease III [Francisella tularensis subsp. tularensis
80700075]
Length = 230
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 66/115 (57%), Gaps = 12/115 (10%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+PE ++ + Y F+D + L++AL+H + + +Y+RLEFLGD+++ F++ LY+
Sbjct: 2 VPEYSRFYNILGYNFKDYTLLIRALTHRS----KTKKNYERLEFLGDSVLSFVIAEVLYK 57
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL--------HDSPRLYENV 216
F L+ G++S +RS +V T A A L + ++++ H ++ E+V
Sbjct: 58 QFIDLAEGKLSQLRSKLVKGATLAQLASSLKMDEYIILGASEQGGHKREKILEDV 112
>gi|442804615|ref|YP_007372764.1| ribonuclease 3 [Clostridium stercorarium subsp. stercorarium DSM
8532]
gi|442740465|gb|AGC68154.1| ribonuclease 3 [Clostridium stercorarium subsp. stercorarium DSM
8532]
Length = 239
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 62/94 (65%), Gaps = 3/94 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
LEK I Y ++DKS LQA+ H +Y + +S +RLEFLGD++++FL+T L++ S
Sbjct: 12 LEKNIGYVYKDKSKALQAIIHSSYAYEHRREGLSSNERLEFLGDSVLNFLITDRLFKEVS 71
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ GE+S +R+++V+ + + A +L++ + LL
Sbjct: 72 DMPEGEMSKLRASVVSEASLSECAKKLNVGEVLL 105
>gi|383482964|ref|YP_005391878.1| ribonuclease III [Rickettsia montanensis str. OSU 85-930]
gi|378935318|gb|AFC73819.1| ribonuclease III [Rickettsia montanensis str. OSU 85-930]
Length = 227
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 62/95 (65%), Gaps = 3/95 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPT---YNANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+LEK ++Y+F++K L++ALSHP+ ++ + Y+RLEFLGDA+++ ++T L+ NF
Sbjct: 6 KLEKLLSYSFKNKELLIEALSHPSLRQHHEYKDDKDYERLEFLGDAVLNLVITEILFRNF 65
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
++ + G ++ IRS +V T +L L +++
Sbjct: 66 ANYNEGNLAKIRSYLVCKETICMVGAKLTLKDYII 100
>gi|269123548|ref|YP_003306125.1| ribonuclease III [Streptobacillus moniliformis DSM 12112]
gi|268314874|gb|ACZ01248.1| ribonuclease III [Streptobacillus moniliformis DSM 12112]
Length = 233
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 62/96 (64%), Gaps = 5/96 (5%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTY----NANRITTSYQRLEFLGDAIIDFLVTAYLYEN 170
+L +INYTF++K LL+AL+H +Y N I + +RLEFLGD+++D + T Y+Y+N
Sbjct: 8 KLMSKINYTFKNKKLLLEALTHSSYVNEHNFPNIKDN-ERLEFLGDSVMDLITTEYIYKN 66
Query: 171 FSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ GE+S I+S +++ F++ + L+L ++
Sbjct: 67 NLKSNEGELSKIKSQIISETVFSTISRDLNLGNYIF 102
>gi|15242329|ref|NP_199328.1| RNAse THREE-like protein 3 [Arabidopsis thaliana]
gi|75171238|sp|Q9FKF0.1|RTL3_ARATH RecName: Full=Ribonuclease 3-like protein 3; AltName:
Full=Ribonuclease III-like protein 3; Short=RNase
III-like protein 3; AltName: Full=Ribonuclease
three-like protein 3
gi|9759600|dbj|BAB11388.1| unnamed protein product [Arabidopsis thaliana]
gi|332007827|gb|AED95210.1| RNAse THREE-like protein 3 [Arabidopsis thaliana]
Length = 957
Score = 70.5 bits (171), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 62/106 (58%), Gaps = 7/106 (6%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
+EK +NY+F +K+ L +A++ + + RLEF GD+I++ T Y+ + +L
Sbjct: 7 VEKILNYSFVNKTLLKEAITQKS-------PLFDRLEFFGDSILEVAFTNYICHTYPNLK 59
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQ 221
E+ D+R+A V+N FA AV +LH LL +P L++ V FA+
Sbjct: 60 VKELRDLRTANVSNEKFARIAVNHNLHHFLLLQNPSLFKKVKNFAE 105
Score = 47.4 bits (111), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/106 (25%), Positives = 55/106 (51%), Gaps = 6/106 (5%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
+EK +NY+F +K+ L + L+H + +Q L F+G++ + T +LY + L
Sbjct: 418 VEKILNYSFVNKTLLKELLTHNN------SPLFQGLMFVGESALSLAFTKHLYLTYPMLE 471
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQ 221
P ++S +R A + +A AV+ +++ + P+ + T F +
Sbjct: 472 PKDLSVLRDANTCHDKYACVAVKKGIYQSFIGSVPKPEKMTTDFIE 517
>gi|154173754|ref|YP_001409228.1| ribonuclease III [Campylobacter curvus 525.92]
gi|402546497|ref|ZP_10843372.1| ribonuclease III [Campylobacter sp. FOBRC14]
gi|189043298|sp|A7H186.1|RNC_CAMC5 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|112803490|gb|EAU00834.1| ribonuclease III [Campylobacter curvus 525.92]
gi|401017310|gb|EJP76071.1| ribonuclease III [Campylobacter sp. FOBRC14]
Length = 223
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+ + L+K + Y F++ L +AL+H + ++ S +RLEFLGDA++D +V YL++
Sbjct: 1 MKDLENLQKLLGYEFENTKLLNEALTHKS---TKLPYSNERLEFLGDAVMDLIVGEYLFK 57
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
FS + G++S +R+A+VN +FA+ A L +
Sbjct: 58 KFSKTNEGDMSKLRAALVNEKSFANMARHLQI 89
>gi|254442236|ref|ZP_05055712.1| ribonuclease III [Verrucomicrobiae bacterium DG1235]
gi|198256544|gb|EDY80852.1| ribonuclease III [Verrucomicrobiae bacterium DG1235]
Length = 263
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 55/97 (56%), Gaps = 2/97 (2%)
Query: 112 ECTQLEKRINYTFQDKSFLLQALSHPTY--NANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+ +LE ++ YTF+ K L Q+L+HP++ N + QRLEFLGD++I ++T LYE
Sbjct: 35 KVKRLENKLGYTFKTKGLLHQSLTHPSFLLNTKDQLKNNQRLEFLGDSVIQLVLTEKLYE 94
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
F L G+++ IRS A A L L +L+
Sbjct: 95 KFPSLREGKLTSIRSGYARGDYMAGIARELKLGDYLI 131
>gi|157964181|ref|YP_001499005.1| ribonuclease III [Rickettsia massiliae MTU5]
gi|189043342|sp|A8F0M2.1|RNC_RICM5 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|157843957|gb|ABV84458.1| Ribonuclease III [Rickettsia massiliae MTU5]
Length = 227
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 61/94 (64%), Gaps = 3/94 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPT---YNANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
LEK ++Y+F++K L++ALSHP+ ++ + Y+RLEFLGDA+++ ++T L+ NF+
Sbjct: 7 LEKLLSYSFKNKELLIEALSHPSLRQHHEYKDDKDYERLEFLGDAVLNLVITEILFRNFA 66
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ + G ++ IRS +V T +L L +++
Sbjct: 67 NYNEGHLAKIRSYLVCKETICMVGAKLTLKNYII 100
>gi|449549195|gb|EMD40161.1| hypothetical protein CERSUDRAFT_112373 [Ceriporiopsis subvermispora
B]
Length = 1511
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 92/204 (45%), Gaps = 47/204 (23%)
Query: 44 KVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQARG 103
KV+ADVVE+L G G + A D AL+G + + P++
Sbjct: 1148 KVLADVVEALIGASYEHGGFDLAA--------------DC-AALFGMGLTWKKVPDRISE 1192
Query: 104 L----DPLRYIPECTQLEKRI-NYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAI 158
+ +PL P L +RI NYTF+ K L++AL+H +Y+ SY+RLEFLGD
Sbjct: 1193 ILARTEPLEEPPTQLYLVERILNYTFKRKELLVEALTHASYHGEHAAMSYERLEFLGDCA 1252
Query: 159 IDFLVTAYLYEN-FSHLSPGEISDIRSAMVNNVTFASYAVR------------------- 198
+D +VT YLY +PG + + ++VN+ A +R
Sbjct: 1253 LDMVVTDYLYHAPGKEYTPGHMHLRKESLVNSHFLAFICLRAFTTTEATSAHWTPKKGTS 1312
Query: 199 -------LDLHKHLLHDSPRLYEN 215
+ LH+ L+H S R+ E+
Sbjct: 1313 TTTEHQQIHLHQCLMHSSRRVLED 1336
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 8/104 (7%)
Query: 146 TSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
T+YQRLE LGD ++ FL + L+ + G ++ + V+N A A+ L++ +
Sbjct: 1024 TNYQRLETLGDTVLKFLASLQLFAQYPLWHEGYLARRKDHAVSNARLAREALGKCLYRWI 1083
Query: 206 LHDS--PRLYENVTRFAQNQEA---RNHEISDEEEE---EEEEE 241
+ + PR ++ + R + H IS E++ E E+E
Sbjct: 1084 IRERFVPRKWKPLYRVQEPSTIITNAEHSISSEQDSIPVEAEQE 1127
>gi|383502172|ref|YP_005415531.1| ribonuclease III [Rickettsia australis str. Cutlack]
gi|378933183|gb|AFC71688.1| ribonuclease III [Rickettsia australis str. Cutlack]
Length = 227
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 13/116 (11%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPT---YNANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+LEK + Y+F+++ L++ALSHP+ ++ + Y+RLEFLGDA+++ +VT L+ NF
Sbjct: 6 KLEKLLGYSFKNQELLIEALSHPSLRQHHEYKYDKDYERLEFLGDAVLNLVVTEILFRNF 65
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL----------HDSPRLYENVT 217
++ + G ++ +RS +V T +L L +++ D+P EN T
Sbjct: 66 ANYNEGNLAKVRSYLVCKETICVVGTKLTLKDYIIMTHGEEVAGGRDNPNNIENAT 121
>gi|307722018|ref|YP_003893158.1| RNAse III [Sulfurimonas autotrophica DSM 16294]
gi|306980111|gb|ADN10146.1| RNAse III [Sulfurimonas autotrophica DSM 16294]
Length = 227
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE+++ Y F+DK +++AL+H +Y + +RLEFLGDA++D +V YL+ F
Sbjct: 8 LEEKLGYEFKDKKLIIEALTHKSY---KQPYDNERLEFLGDAVLDLVVGEYLFRKFRTSD 64
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G++S IR+++VN F A L L ++L
Sbjct: 65 EGKLSKIRASLVNETGFDKLARALHLGDYIL 95
>gi|406864416|gb|EKD17461.1| putative Dicer-like protein 1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1827
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 103/254 (40%), Gaps = 35/254 (13%)
Query: 40 KLGDKVVADVVESLTGVYLRS--------CGIEGAMLFLQALNILPQSKIDVHEALYGPH 91
KLGDK +ADV E+L G L + + + + N D ++ P
Sbjct: 1454 KLGDKSIADVCEALIGAALLTYHESKDMDAAVRAVTELVSSENHQVTCFADYYKLYKKPK 1513
Query: 92 PSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYN-ANRITTSYQR 150
+ E R L QLE+ Y F+ A +HP+Y + SYQR
Sbjct: 1514 YQLAQATEMQRNL--------AAQLEQEHPYHFKYPRLARSAFTHPSYPYSYEHVPSYQR 1565
Query: 151 LEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSP 210
LEFLGD+++D +LY F P +++ + AMV+N + V L H+HLL +
Sbjct: 1566 LEFLGDSLLDMACINFLYHAFPDKDPQWLTEHKMAMVSNQFLGALCVSLGFHRHLLLFNA 1625
Query: 211 RLYENVTRFAQN-QEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYV 269
+ ++ + + EAR +D + + D D + V +
Sbjct: 1626 GFQKQISDYVTDITEARTQAEADAVRAGKSPQ--------------DCNPDYWTSVRQ-- 1669
Query: 270 DVPKALGDVFEALV 283
PK L DV EA +
Sbjct: 1670 -PPKCLPDVVEAYI 1682
>gi|315127397|ref|YP_004069400.1| RNase III, ds RNA [Pseudoalteromonas sp. SM9913]
gi|359445973|ref|ZP_09235683.1| ribonuclease III [Pseudoalteromonas sp. BSi20439]
gi|392553972|ref|ZP_10301109.1| RNase III, ds RNA [Pseudoalteromonas undina NCIMB 2128]
gi|315015911|gb|ADT69249.1| RNase III, ds RNA [Pseudoalteromonas sp. SM9913]
gi|358040171|dbj|GAA71932.1| ribonuclease III [Pseudoalteromonas sp. BSi20439]
Length = 225
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
T+L KRI YTF D+ L QA++H ++ +RLEFLGD+I+ F++ LY F
Sbjct: 6 TELYKRIGYTFADQGLLEQAMTHRSHKGQH----NERLEFLGDSILSFVIANALYAKFPK 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G++S +RS +V T A + + +L +L
Sbjct: 62 AREGDLSRMRSTLVRGQTLAEFGLEFELGDYL 93
>gi|374582910|ref|ZP_09656004.1| ribonuclease III [Desulfosporosinus youngiae DSM 17734]
gi|374418992|gb|EHQ91427.1| ribonuclease III [Desulfosporosinus youngiae DSM 17734]
Length = 261
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 54/95 (56%), Gaps = 3/95 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+L KR+ AL+HP+Y N + QRLEFLGDAI+DF+V YLY ++
Sbjct: 36 KLAKRLELGIPPNRLFTTALTHPSYVFENPQFGKENNQRLEFLGDAILDFVVAEYLYLSY 95
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
GE++ +R+A+VN T A A ++L + LL
Sbjct: 96 PERPEGELTKMRAAVVNETTLARKAHEIELGQELL 130
>gi|339489106|ref|YP_004703634.1| ribonuclease III [Pseudomonas putida S16]
gi|421529373|ref|ZP_15975910.1| ribonuclease III [Pseudomonas putida S11]
gi|431804156|ref|YP_007231059.1| ribonuclease III [Pseudomonas putida HB3267]
gi|338839949|gb|AEJ14754.1| ribonuclease III [Pseudomonas putida S16]
gi|402213211|gb|EJT84571.1| ribonuclease III [Pseudomonas putida S11]
gi|430794921|gb|AGA75116.1| ribonuclease III [Pseudomonas putida HB3267]
Length = 229
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
+LE+++ YTF+++ +L AL+H +Y + +RLEFLGDAI++F+ L+E F
Sbjct: 6 ARLERKLGYTFKNQDQMLLALTHRSYAGR----NNERLEFLGDAILNFVAGEALFERFPQ 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A DL HL S L
Sbjct: 62 AREGQLSRLRARLVKGETLARLARGFDLGDHLRLGSGEL 100
>gi|224088236|ref|XP_002308384.1| dicer-like protein [Populus trichocarpa]
gi|222854360|gb|EEE91907.1| dicer-like protein [Populus trichocarpa]
Length = 1588
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 86/187 (45%), Gaps = 27/187 (14%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
L +K V+DVVE+L G +L G + A+ FL+ + I K+D ++ + +
Sbjct: 1118 LHNKTVSDVVEALIGAFLVDSGFKAAIAFLRWIGI----KVDFDDS------QVINICQA 1167
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
+R L + LE + + F K LLQA HP++ EF G I+
Sbjct: 1168 SRTYAMLNPSMDLATLENLLGHQFLYKGLLLQAFVHPSHKNGG--------EF-GVMILQ 1218
Query: 161 FLVTAYL-------YENF-SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
F +T + F + PG ++D+RS +VNN FAS AV H++L+ DS L
Sbjct: 1219 FAMTLMFPPEIGVPWRCFYPKMKPGHLTDLRSVLVNNRAFASVAVDRSFHEYLICDSDAL 1278
Query: 213 YENVTRF 219
+F
Sbjct: 1279 SAATKKF 1285
>gi|170749855|ref|YP_001756115.1| ribonuclease III [Methylobacterium radiotolerans JCM 2831]
gi|170656377|gb|ACB25432.1| Ribonuclease III [Methylobacterium radiotolerans JCM 2831]
Length = 259
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 54/96 (56%), Gaps = 1/96 (1%)
Query: 111 PECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYEN 170
P T LE+RI ++F D+ L +AL+H T A+ SYQRLEFLGD ++ V LY
Sbjct: 26 PPLTALEERIGHSFGDQDLLTRALTH-TSKASGRGGSYQRLEFLGDRVLGLAVADRLYGA 84
Query: 171 FSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
F G++S +A+V T A+ A ++ HL+
Sbjct: 85 FPEADEGDLSRRLAALVRRETCAAVAASWEVGPHLI 120
>gi|400598379|gb|EJP66096.1| RNase3 domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 1402
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 85/168 (50%), Gaps = 18/168 (10%)
Query: 26 EKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAM----LFLQALNILPQSKI 81
E + S + ++ KV+ADVVE+L GV + GI A+ +F+ + + S
Sbjct: 1035 ETILSGKMKPFKKREMSTKVLADVVEALVGVAYIAGGIPKAIQCLSIFINECDWIDPS-- 1092
Query: 82 DVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNA 141
+ E + PS C + + Y+ LE+ I Y+F KS LL+A +H +Y
Sbjct: 1093 ECREEFFACAPS--HCVDSS-------YL---HILEELIGYSFTKKSLLLEATTHASYIG 1140
Query: 142 NRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
+ S++RLEFLGDA++D+++ + L L + I++AMVN
Sbjct: 1141 DISGRSWERLEFLGDAVLDYMIVSKLMNRSPPLPHSRMHMIKTAMVNK 1188
>gi|387771311|ref|ZP_10127477.1| ribonuclease III [Pasteurella bettyae CCUG 2042]
gi|386902516|gb|EIJ67356.1| ribonuclease III [Pasteurella bettyae CCUG 2042]
Length = 224
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+L++ INY F+D + L QAL+H + T +RLEFLGDAI+++ + LY F H
Sbjct: 6 RLQRHINYQFKDVALLKQALTHRSA----ATKHNERLEFLGDAILNYTIADALYHQFPHC 61
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ GE+S +R+ +V T A A + +L ++LL
Sbjct: 62 NEGELSRMRATLVREPTLAILARQFELGEYLL 93
>gi|386748059|ref|YP_006221267.1| ribonuclease III [Helicobacter cetorum MIT 99-5656]
gi|384554301|gb|AFI06057.1| ribonuclease III [Helicobacter cetorum MIT 99-5656]
Length = 234
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 56/90 (62%), Gaps = 3/90 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE+ + Y+F+DK L QAL+H + R+ + +RLEFLGDA++D +V LY F +
Sbjct: 16 LERALGYSFKDKRLLEQALTHKS---CRLALNNERLEFLGDAVLDLIVGELLYHKFYQYN 72
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G++S +R+++V+ F A + LH +L
Sbjct: 73 EGKLSKLRASIVSEQGFTKLAKAISLHDYL 102
>gi|359437628|ref|ZP_09227685.1| ribonuclease III [Pseudoalteromonas sp. BSi20311]
gi|358027670|dbj|GAA63934.1| ribonuclease III [Pseudoalteromonas sp. BSi20311]
Length = 225
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
T+L KRI YTF D+ L QA++H ++ +RLEFLGD+I+ F++ LY F
Sbjct: 6 TELYKRIGYTFADQGLLEQAMTHRSHKGQH----NERLEFLGDSILSFVIANALYAKFPK 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G++S +RS +V T A + + +L +L
Sbjct: 62 AREGDLSRMRSTLVRGQTLAEFGLEFELGDYL 93
>gi|322700444|gb|EFY92199.1| Dicer-like protein 2 [Metarhizium acridum CQMa 102]
Length = 1441
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 81/153 (52%), Gaps = 16/153 (10%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQA-LNILPQSKIDVHEALYGPHPSAVRCP 98
K+ K +ADVVE+L G + GI A + +N + + + AL+
Sbjct: 1091 KISTKTLADVVEALIGASYINGGITKAQNCISLFVNEIQWQDVSANRALFF--------- 1141
Query: 99 EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPT--YNANRITTSYQRLEFLGD 156
+ AR D L E LE + Y F+ KS L++A++H + ++ NR SY+ LEF+GD
Sbjct: 1142 KMARDQDVLP--AELKPLEHLVGYQFKKKSLLIEAMTHQSCMFDYNR--RSYEHLEFIGD 1197
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
AI+DF++ +Y L+P ++ +++AMVN
Sbjct: 1198 AILDFIIVRKMYTAGPLLAPYQMHSLKTAMVNG 1230
>gi|154301554|ref|XP_001551189.1| hypothetical protein BC1G_10104 [Botryotinia fuckeliana B05.10]
Length = 1842
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 85/186 (45%), Gaps = 5/186 (2%)
Query: 24 SPEKLPSSSYNFLDRIKLGDKVVADVVESLTGVYLRSCGIEGAM-LFLQALNILPQSKID 82
PE L + + KLGDK VADV E++ G L S +M ++A+ + S D
Sbjct: 1447 GPELLRGKTATAPNTHKLGDKSVADVCEAMIGAALLSHHESKSMDNAVRAVTEVVNS--D 1504
Query: 83 VHEAL-YGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-N 140
H A+ + + P+ I Q+E + Y F+ L A HP Y
Sbjct: 1505 NHNAVVWSDYYKLYEKPKWQTATATAAQIDMARQVEMKHPYHFKHPRLLRSAFIHPAYLF 1564
Query: 141 ANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLD 200
YQRLEFLGD+++D +L+ N P +++ + A+V+N + V+L
Sbjct: 1565 IYEQIPCYQRLEFLGDSLLDMACVNFLFHNHPTKDPQWLTEHKMAIVSNQFLGALCVKLG 1624
Query: 201 LHKHLL 206
HKHLL
Sbjct: 1625 FHKHLL 1630
>gi|431806995|ref|YP_007233893.1| ribonuclease III [Brachyspira pilosicoli P43/6/78]
gi|430780354|gb|AGA65638.1| ribonuclease III [Brachyspira pilosicoli P43/6/78]
Length = 229
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Query: 117 EKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
EK + Y+F++K++LL+A++H T+ N N QRLEFLGD+++ +++ ++Y+ ++++
Sbjct: 10 EKVLQYSFKNKNYLLEAITHRTFANENGNMKYNQRLEFLGDSVLSLIISEHIYKEYNNVK 69
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G++S I++ +V+ T AS + +L L LL
Sbjct: 70 EGKLSKIKAYLVSQNTLASISRKLKLGDFLL 100
>gi|406897689|gb|EKD41567.1| hypothetical protein ACD_73C00655G0003 [uncultured bacterium]
Length = 248
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 62/99 (62%), Gaps = 3/99 (3%)
Query: 111 PECTQLEKRINYTFQDKSFLLQALSHPTY-NANRI--TTSYQRLEFLGDAIIDFLVTAYL 167
P EK++ Y F D S L +AL+H +Y N N++ T + +RLEFLGDA+++ V+ L
Sbjct: 20 PSLVLCEKKLGYVFSDISLLKKALTHKSYANENKLPSTENNERLEFLGDAVLELAVSHLL 79
Query: 168 YENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ F+ + G++S +R+A+VN + A+ A ++L + L
Sbjct: 80 MQMFAESNEGDLSKLRAAVVNETSLAALAREINLGEFLF 118
>gi|393758412|ref|ZP_10347233.1| ribonuclease III [Alcaligenes faecalis subsp. faecalis NCIB 8687]
gi|393164831|gb|EJC64883.1| ribonuclease III [Alcaligenes faecalis subsp. faecalis NCIB 8687]
Length = 252
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE I Y+F+D L QAL+H +++A +RLEFLGD++++F V A L+E F +
Sbjct: 7 LEAAIGYSFKDIGLLEQALTHRSHSARH----NERLEFLGDSVLNFTVAALLFERFQRID 62
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G++S +R+ +V A A RL L +L
Sbjct: 63 EGDLSRLRANLVKQAALAEIATRLGLSDYL 92
>gi|378727578|gb|EHY54037.1| RNA helicase/RNAse III [Exophiala dermatitidis NIH/UT8656]
Length = 1629
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 62/250 (24%), Positives = 106/250 (42%), Gaps = 41/250 (16%)
Query: 41 LGDKVVADVVESLTGVYLRSC-GIEGAMLFLQALNILPQSKIDVHE----ALYGPHPSAV 95
LG K +ADV E+ G + + + + F L I +K+ HE +
Sbjct: 1174 LGKKTIADVCEATIGACIMTTQDLPTSTRF--DLGIKAITKLVGHEDHAITSWREILPMY 1231
Query: 96 RCPEQARGLDPLRYIPECTQLEKRI----NYTFQDKSFLLQALSHPTYNANRITTSYQRL 151
+ P + ++ P L +++ Y F++ L A +H + + N QRL
Sbjct: 1232 KAPRWSLAMND----PVANDLARKVYHVTGYRFKNPCLLRSAFTHSS-DQNSPVPDLQRL 1286
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPR 211
EFLGDA +D++ +L+ N P +++ + AMV+N A+ AV L ++ + SP
Sbjct: 1287 EFLGDACLDWVCIWWLFRNNPTRGPQWLTEHKMAMVSNRFLAALAVILGFNRLISASSPA 1346
Query: 212 LYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDV 271
LY + +A + L E++DV+ D + RV
Sbjct: 1347 LYAEIGTYAAK-------------------------VLELYEQEDVKPDFWTRVTSGSAP 1381
Query: 272 PKALGDVFEA 281
PKAL D+ E+
Sbjct: 1382 PKALADLVES 1391
>gi|158706522|sp|Q4WVE3.3|DCL1_ASPFU RecName: Full=Dicer-like protein 1; Includes: RecName:
Full=Endoribonuclease dcl1; Includes: RecName:
Full=ATP-dependent helicase dcl1
Length = 1537
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEG----AMLFLQALNILPQSKIDVHEALYGPHPSAVR 96
LG+K +ADV E+L G L S G E A + AL P ++ + +
Sbjct: 1181 LGEKTIADVCEALIGASLLSGGPEHRFDMATKAVSALVDSPSHRVSCWKEYITLYTLPKY 1240
Query: 97 CPEQARGL--DPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNAN---RITTSYQRL 151
E+ RG D R++ E+ + Y F L A++HP+ + R+ YQRL
Sbjct: 1241 QTEKHRGSEDDLARHV------EEELGYHFTYPRLLASAITHPSLPSTWGYRVPC-YQRL 1293
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPR 211
EFLGD+++D + L+ F P +S+ + AMV+N + +V+L H+ ++ S
Sbjct: 1294 EFLGDSLLDMVCVEDLFRRFPDRDPQWLSEHKMAMVSNKFLGALSVKLGFHRRIMAFSNP 1353
Query: 212 LYENVTRFAQNQEARNHE 229
L +T + + E E
Sbjct: 1354 LQAQITHYVEEIETAQAE 1371
>gi|120555160|ref|YP_959511.1| ribonuclease III [Marinobacter aquaeolei VT8]
gi|387813404|ref|YP_005428886.1| RNase III [Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|120325009|gb|ABM19324.1| RNAse III [Marinobacter aquaeolei VT8]
gi|381338416|emb|CCG94463.1| RNase III [Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 229
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 4/102 (3%)
Query: 111 PECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYEN 170
P+ QL++RI Y F++ LL AL+H ++ + +RLEFLGD+I++ ++ YLY +
Sbjct: 5 PDLDQLQRRIGYQFKEPERLLLALTHRSFG----NQNNERLEFLGDSIVNMVIAEYLYLH 60
Query: 171 FSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
F G++S +R+ MV VT A L ++L S L
Sbjct: 61 FEKAREGQLSRLRARMVKGVTLAEIGREFQLGQYLRLGSGEL 102
>gi|384172905|ref|YP_005554282.1| ribonuclease III [Arcobacter sp. L]
gi|345472515|dbj|BAK73965.1| ribonuclease III [Arcobacter sp. L]
Length = 224
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 62/97 (63%), Gaps = 3/97 (3%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+ + ++LEK ++Y F++K+ +++AL+H +Y + + +RLEFLGDA+++ +V YLY
Sbjct: 1 MSDYSKLEKCLDYQFKNKNLIIEALTHKSY---KKPYNNERLEFLGDAVLNLIVGEYLYL 57
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
F + GE+S IR+++VN F A + L ++
Sbjct: 58 KFPKSNEGELSKIRASLVNETGFTRLANEIKLGDYIF 94
>gi|407455171|ref|YP_006734062.1| ribonuclease III [Chlamydia psittaci GR9]
gi|407457904|ref|YP_006736209.1| ribonuclease III [Chlamydia psittaci WS/RT/E30]
gi|405781714|gb|AFS20463.1| ribonuclease III [Chlamydia psittaci GR9]
gi|405785349|gb|AFS24095.1| ribonuclease III [Chlamydia psittaci WS/RT/E30]
Length = 237
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYN--ANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
++E ++N+TF L+ AL+HP+Y IT +RLEFLGDA++ +VT +L+ F
Sbjct: 9 EVEAKLNFTFTQPKLLVTALTHPSYRNETATITEDSERLEFLGDAVLCLIVTEHLFLLFP 68
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ G +S R+A++N V+ Y L L ++LL
Sbjct: 69 SMDEGTLSTARAALINAVSCCQYTDALGLGEYLL 102
>gi|434381810|ref|YP_006703593.1| ribonuclease III [Brachyspira pilosicoli WesB]
gi|404430459|emb|CCG56505.1| ribonuclease III [Brachyspira pilosicoli WesB]
Length = 229
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Query: 117 EKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
EK + Y+F++K++LL+A++H T+ N N QRLEFLGD+++ +++ ++Y+ ++++
Sbjct: 10 EKVLQYSFKNKNYLLEAITHRTFANENGNMKYNQRLEFLGDSVLSLIISEHIYKEYNNVK 69
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G++S I++ +V+ T AS + +L L LL
Sbjct: 70 EGKLSKIKAYLVSQNTLASISRKLKLGDFLL 100
>gi|329942692|ref|ZP_08291471.1| ribonuclease III [Chlamydophila psittaci Cal10]
gi|332287287|ref|YP_004422188.1| ribonuclease III [Chlamydophila psittaci 6BC]
gi|384450439|ref|YP_005663039.1| ribonuclease III [Chlamydophila psittaci 6BC]
gi|384451441|ref|YP_005664039.1| ribonuclease III [Chlamydophila psittaci 01DC11]
gi|384452414|ref|YP_005665011.1| ribonuclease III [Chlamydophila psittaci 08DC60]
gi|384453390|ref|YP_005665986.1| ribonuclease III [Chlamydophila psittaci C19/98]
gi|384454369|ref|YP_005666964.1| ribonuclease III [Chlamydophila psittaci 02DC15]
gi|392376528|ref|YP_004064306.1| ribonuclease III [Chlamydophila psittaci RD1]
gi|406593278|ref|YP_006740457.1| ribonuclease III [Chlamydia psittaci NJ1]
gi|407456552|ref|YP_006735125.1| ribonuclease III [Chlamydia psittaci VS225]
gi|407460523|ref|YP_006738298.1| ribonuclease III [Chlamydia psittaci WC]
gi|313847871|emb|CBY16866.1| ribonuclease III [Chlamydophila psittaci RD1]
gi|325506653|gb|ADZ18291.1| ribonuclease III [Chlamydophila psittaci 6BC]
gi|328814952|gb|EGF84941.1| ribonuclease III [Chlamydophila psittaci Cal10]
gi|328914533|gb|AEB55366.1| ribonuclease III [Chlamydophila psittaci 6BC]
gi|334692171|gb|AEG85390.1| ribonuclease III [Chlamydophila psittaci C19/98]
gi|334693151|gb|AEG86369.1| ribonuclease III [Chlamydophila psittaci 01DC11]
gi|334694126|gb|AEG87343.1| ribonuclease III [Chlamydophila psittaci 02DC15]
gi|334695103|gb|AEG88319.1| ribonuclease III [Chlamydophila psittaci 08DC60]
gi|405783813|gb|AFS22560.1| ribonuclease III [Chlamydia psittaci VS225]
gi|405787528|gb|AFS26272.1| ribonuclease III [Chlamydia psittaci WC]
gi|405789150|gb|AFS27892.1| ribonuclease III [Chlamydia psittaci NJ1]
Length = 237
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYN--ANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
++E ++N+TF L+ AL+HP+Y IT +RLEFLGDA++ +VT +L+ F
Sbjct: 9 EVEAKLNFTFTQPKLLVTALTHPSYRNETATITEDSERLEFLGDAVLCLIVTEHLFLLFP 68
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ G +S R+A++N V+ Y L L ++LL
Sbjct: 69 SMDEGTLSTARAALINAVSCCQYTDALGLGEYLL 102
>gi|389871837|ref|YP_006379256.1| ribonuclease III [Advenella kashmirensis WT001]
gi|388537086|gb|AFK62274.1| ribonuclease III [Advenella kashmirensis WT001]
Length = 250
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
++LE+ + Y F+D+ L+QAL+H +++A T +R EFLGD+I++F V A L+
Sbjct: 4 SRLERLLGYQFKDQRLLVQALTHRSHSA----THNERFEFLGDSILNFTVAAILFHRLQR 59
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G++S IR+++V T A A RL+L + L
Sbjct: 60 EDEGDLSRIRASLVKQATLADIAHRLELPQFL 91
>gi|333375615|ref|ZP_08467422.1| ribonuclease III [Kingella kingae ATCC 23330]
gi|332970079|gb|EGK09076.1| ribonuclease III [Kingella kingae ATCC 23330]
Length = 241
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 59/93 (63%), Gaps = 4/93 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
+ L+ ++ Y F+ ++L QAL+H + ++ +Y+RLEF+GDAI+D+++T L+E F +
Sbjct: 11 SSLQTKLGYIFKQPTWLQQALTHRSAHSQ----NYERLEFVGDAILDYVITLMLFEAFPN 66
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
L G +S +R+ +V T A A L L K L+
Sbjct: 67 LPEGRLSVLRTHLVKEATLAEVARELGLGKALI 99
>gi|268680594|ref|YP_003305025.1| ribonuclease III [Sulfurospirillum deleyianum DSM 6946]
gi|268618625|gb|ACZ12990.1| ribonuclease III [Sulfurospirillum deleyianum DSM 6946]
Length = 227
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 59/86 (68%), Gaps = 3/86 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
L+KR+ Y F++++ +++AL+H + ++ + +RLEFLGDA++D +V YLY+ F ++
Sbjct: 8 LQKRLGYQFKNQNLIIEALTHKS---SKQPYNNERLEFLGDAVLDLIVGEYLYKEFLGVA 64
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDL 201
GE+S +R+++VN +F A L L
Sbjct: 65 EGELSKLRASLVNEKSFEKLARLLHL 90
>gi|159126799|gb|EDP51915.1| RNA helicase/RNAse III, putative [Aspergillus fumigatus A1163]
Length = 1546
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEG----AMLFLQALNILPQSKIDVHEALYGPHPSAVR 96
LG+K +ADV E+L G L S G E A + AL P ++ + +
Sbjct: 1202 LGEKTIADVCEALIGASLLSGGPEHRFDMATKAVSALVDSPSHRVSCWKEYITLYTLPKY 1261
Query: 97 CPEQARGL--DPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNAN---RITTSYQRL 151
E+ RG D R++ E+ + Y F L A++HP+ + R+ YQRL
Sbjct: 1262 QTEKHRGSEDDLARHV------EEELGYHFTYPRLLASAITHPSLPSTWGYRVPC-YQRL 1314
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPR 211
EFLGD+++D + L+ F P +S+ + AMV+N + +V+L H+ ++ S
Sbjct: 1315 EFLGDSLLDMVCVEDLFRRFPDRDPQWLSEHKMAMVSNKFLGALSVKLGFHRRIMAFSNP 1374
Query: 212 LYENVTRFAQNQEARNHE 229
L +T + + E E
Sbjct: 1375 LQAQITHYVEEIETAQAE 1392
>gi|348589880|ref|YP_004874342.1| ribonuclease III [Taylorella asinigenitalis MCE3]
gi|347973784|gb|AEP36319.1| Ribonuclease III [Taylorella asinigenitalis MCE3]
Length = 251
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 60/90 (66%), Gaps = 4/90 (4%)
Query: 112 ECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+ T+L+K++NY+F+D L +AL+H +Y+ +T +RLEFLGD+I++F V + L++
Sbjct: 2 KLTKLQKKLNYSFKDVQLLNRALTHRSYS----STHNERLEFLGDSILNFSVASILFKKL 57
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
+ G+++ IR++ VN T A A L+L
Sbjct: 58 KDQAEGDLTRIRASYVNQDTLAKIAQNLEL 87
>gi|407459149|ref|YP_006737252.1| ribonuclease III [Chlamydia psittaci M56]
gi|405785977|gb|AFS24722.1| ribonuclease III [Chlamydia psittaci M56]
Length = 237
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYN--ANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
++E ++N+TF L+ AL+HP+Y IT +RLEFLGDA++ +VT +L+ F
Sbjct: 9 EVEAKLNFTFTQPKLLVTALTHPSYRNETATITEDSERLEFLGDAVLCLIVTEHLFLLFP 68
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ G +S R+A++N V+ Y L L ++LL
Sbjct: 69 SMDEGTLSTARAALINAVSCCQYTDALGLGEYLL 102
>gi|406592185|ref|YP_006739365.1| ribonuclease III [Chlamydia psittaci CP3]
gi|406594411|ref|YP_006741496.1| ribonuclease III [Chlamydia psittaci MN]
gi|410858312|ref|YP_006974252.1| ribonuclease III [Chlamydia psittaci 01DC12]
gi|405782843|gb|AFS21591.1| ribonuclease III [Chlamydia psittaci MN]
gi|405788057|gb|AFS26800.1| ribonuclease III [Chlamydia psittaci CP3]
gi|410811207|emb|CCO01852.1| ribonuclease III [Chlamydia psittaci 01DC12]
Length = 237
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYN--ANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
++E ++N+TF L+ AL+HP+Y IT +RLEFLGDA++ +VT +L+ F
Sbjct: 9 EVEAKLNFTFTQPKLLVTALTHPSYRNETATITEDSERLEFLGDAVLCLIVTEHLFLLFP 68
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ G +S R+A++N V+ Y L L ++LL
Sbjct: 69 SMDEGTLSTARAALINAVSCCQYTDALGLGEYLL 102
>gi|401563684|ref|ZP_10804629.1| ribonuclease III [Selenomonas sp. FOBRC6]
gi|400189583|gb|EJO23667.1| ribonuclease III [Selenomonas sp. FOBRC6]
Length = 238
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 60/101 (59%), Gaps = 2/101 (1%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYN--ANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
+L +I +F D S L +AL+HP+Y A +RLEFLGDA+++ + YLY +F
Sbjct: 15 RLSVQIGVSFGDLSLLDEALTHPSYTNEAKDDIPHNERLEFLGDAVLELASSTYLYAHFP 74
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLY 213
S GE++ +R+++V + T A A +LDL +LL L+
Sbjct: 75 ECSEGELTKMRASLVQSETLARLARKLDLGNYLLFGRGELH 115
>gi|407453856|ref|YP_006732964.1| ribonuclease III [Chlamydia psittaci 84/55]
gi|405780615|gb|AFS19365.1| ribonuclease III [Chlamydia psittaci 84/55]
Length = 223
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYN--ANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
++E ++N+TF L+ AL+HP+Y IT +RLEFLGDA++ +VT +L+ F
Sbjct: 9 EVEAKLNFTFTQPKLLVTALTHPSYRNETATITEDSERLEFLGDAVLCLIVTEHLFLLFP 68
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ G +S R+A++N V+ Y L L ++LL
Sbjct: 69 SMDEGTLSTARAALINAVSCCQYTDALGLGEYLL 102
>gi|62184964|ref|YP_219749.1| ribonuclease III [Chlamydophila abortus S26/3]
gi|424825015|ref|ZP_18250002.1| ribonuclease III [Chlamydophila abortus LLG]
gi|81312866|sp|Q5L6E3.1|RNC_CHLAB RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|62148031|emb|CAH63783.1| ribonuclease III [Chlamydophila abortus S26/3]
gi|333410114|gb|EGK69101.1| ribonuclease III [Chlamydophila abortus LLG]
Length = 237
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYN--ANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
++E ++N+TF L+ AL+HP+Y IT +RLEFLGDA++ +VT +L+ F
Sbjct: 9 EVEAKLNFTFTQPKLLVTALTHPSYRNETATITEDSERLEFLGDAVLCLIVTEHLFLLFP 68
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ G +S R+A++N V+ Y L L ++LL
Sbjct: 69 SMDEGTLSTARAALINAVSCCQYTDALGLGEYLL 102
>gi|291277478|ref|YP_003517250.1| ribonuclease III [Helicobacter mustelae 12198]
gi|290964672|emb|CBG40527.1| ribonuclease III [Helicobacter mustelae 12198]
Length = 223
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LEK INY F+++ LL AL+H + + + +RLE+LGDA++D L+ +LY+ F
Sbjct: 4 LEKAINYHFKNQDLLLTALTHKSCKNKK---NNERLEYLGDAVLDLLIGEFLYQEFPEHK 60
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G++S +R+A+VN +F +A + L +L
Sbjct: 61 EGDLSKMRAALVNEQSFMRFAKAIHLQDFIL 91
>gi|146324173|ref|XP_753471.2| RNA helicase/RNAse III [Aspergillus fumigatus Af293]
gi|129558032|gb|EAL91433.2| RNA helicase/RNAse III, putative [Aspergillus fumigatus Af293]
Length = 1546
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 16/198 (8%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEG----AMLFLQALNILPQSKIDVHEALYGPHPSAVR 96
LG+K +ADV E+L G L S G E A + AL P ++ + +
Sbjct: 1202 LGEKTIADVCEALIGASLLSGGPEHRFDMATKAVSALVDSPSHRVSCWKEYITLYTLPKY 1261
Query: 97 CPEQARGL--DPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNAN---RITTSYQRL 151
E+ RG D R++ E+ + Y F L A++HP+ + R+ YQRL
Sbjct: 1262 QTEKHRGSEDDLARHV------EEELGYHFTYPRLLASAITHPSLPSTWGYRVP-CYQRL 1314
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPR 211
EFLGD+++D + L+ F P +S+ + AMV+N + +V+L H+ ++ S
Sbjct: 1315 EFLGDSLLDMVCVEDLFRRFPDRDPQWLSEHKMAMVSNKFLGALSVKLGFHRRIMAFSNP 1374
Query: 212 LYENVTRFAQNQEARNHE 229
L +T + + E E
Sbjct: 1375 LQAQITHYVEEIETAQAE 1392
>gi|384915457|ref|ZP_10015677.1| Ribonuclease 3 [Methylacidiphilum fumariolicum SolV]
gi|384527143|emb|CCG91546.1| Ribonuclease 3 [Methylacidiphilum fumariolicum SolV]
Length = 242
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 58/96 (60%), Gaps = 3/96 (3%)
Query: 113 CTQLEKRINYTFQDKSFLLQALSHPTYNANRITTS---YQRLEFLGDAIIDFLVTAYLYE 169
+LE+R+ +TF++ L +AL+HP+Y + T+ +QRLEFLGDA++ +T LYE
Sbjct: 3 LAELEERLGHTFRNNQLLEEALTHPSYFVESMKTTGKDFQRLEFLGDAVLGLAITEKLYE 62
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
F G+++ +R+ +V+ + + L + K+L
Sbjct: 63 IFPSFDEGKLTKLRAKLVSRKVLSPLSSSLGIGKYL 98
>gi|56419727|ref|YP_147045.1| ribonuclease III [Geobacillus kaustophilus HTA426]
gi|81347639|sp|Q5L0Q3.1|RNC_GEOKA RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|56379569|dbj|BAD75477.1| dsRNA-specific ribonuclease [Geobacillus kaustophilus HTA426]
Length = 246
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+L+ +I TF+++ L+QA +H +Y + R+ +RLEFLGDA+++ V+ YL++ F
Sbjct: 20 ELQNKIGITFRNEKLLIQAFTHSSYVNEHRRRLHEDNERLEFLGDAVLELTVSQYLFQKF 79
Query: 172 SHLSPGEISDIRSAMVNNVTFASYA 196
H+S G+++ +R+A+V + +A
Sbjct: 80 PHMSEGQLTKLRAAIVCEPSLVKFA 104
>gi|419760458|ref|ZP_14286737.1| ribonuclease III [Thermosipho africanus H17ap60334]
gi|407514561|gb|EKF49376.1| ribonuclease III [Thermosipho africanus H17ap60334]
Length = 230
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 55/81 (67%), Gaps = 2/81 (2%)
Query: 108 RYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYL 167
R PE +LE ++ Y F+++ LL AL+H ++ SY+RLEFLGDA+ID L++ L
Sbjct: 3 RLRPE--KLENKLGYRFRNEELLLTALTHTSFAHENNVKSYERLEFLGDAVIDLLLSTIL 60
Query: 168 YENFSHLSPGEISDIRSAMVN 188
Y+ F++L+ G ++ I++A+ +
Sbjct: 61 YQEFTNLNEGTMAQIKAAVAS 81
>gi|357058566|ref|ZP_09119416.1| ribonuclease III [Selenomonas infelix ATCC 43532]
gi|355373701|gb|EHG21012.1| ribonuclease III [Selenomonas infelix ATCC 43532]
Length = 238
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 111 PECTQLEKRINYTFQDKSFLLQALSHPTYNANR--ITTSYQRLEFLGDAIIDFLVTAYLY 168
E +L +I +F D S L +AL+HP+Y + T +RLEFLGDA+++ + YLY
Sbjct: 11 AELVRLSGQIGVSFHDLSLLDEALTHPSYTNEKKDAITHNERLEFLGDAVLELASSTYLY 70
Query: 169 ENFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
F + GE++ +R+++V + T A A +LDL
Sbjct: 71 ARFPDCTEGELTKMRASLVQSETLARLARQLDL 103
>gi|375008162|ref|YP_004981795.1| ribonuclease 3 [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359287011|gb|AEV18695.1| Ribonuclease 3 [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 246
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 56/85 (65%), Gaps = 3/85 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+L+ +I TF+++ L+QA +H +Y + R+ +RLEFLGDA+++ V+ YL++ F
Sbjct: 20 ELQNKIGITFRNEKLLIQAFTHSSYVNEHRRRLHEDNERLEFLGDAVLELTVSQYLFQKF 79
Query: 172 SHLSPGEISDIRSAMVNNVTFASYA 196
H+S G+++ +R+A+V + +A
Sbjct: 80 PHMSEGQLTKLRAAIVCEPSLVKFA 104
>gi|386714302|ref|YP_006180625.1| ribonuclease III [Halobacillus halophilus DSM 2266]
gi|384073858|emb|CCG45351.1| ribonuclease III [Halobacillus halophilus DSM 2266]
Length = 230
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 61/100 (61%), Gaps = 3/100 (3%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRIT--TSYQRLEFLGDAIIDFLVTAY 166
+ + + +KR+N FQD S L QA +H +Y N +R T +RLEFLGDA+++ V+ Y
Sbjct: 1 MDDFSSFQKRVNIHFQDISLLEQAFTHSSYVNEHRKTERKDNERLEFLGDAVLELGVSQY 60
Query: 167 LYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
LY + ++ GE++ R+++V + +A L+ H+ +L
Sbjct: 61 LYREYPDMAEGELTKFRASIVCEASLVDFAKDLNFHELIL 100
>gi|408356893|ref|YP_006845424.1| ribonuclease III [Amphibacillus xylanus NBRC 15112]
gi|407727664|dbj|BAM47662.1| ribonuclease III [Amphibacillus xylanus NBRC 15112]
Length = 229
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+LEK++ TF+++ L+QA +H +Y N N+I +RLEFLGDA+++ ++ YLY +
Sbjct: 5 ELEKKLGITFKNQKLLIQAFTHSSYVNENRNKIQQDNERLEFLGDAVLELGISQYLYRTY 64
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ GE++ +R+ +V +A+ L +++L
Sbjct: 65 PNKPEGELTKLRATIVCEPALVKFALDLKFDQYVL 99
>gi|357462179|ref|XP_003601371.1| Ribonuclease 3-like protein [Medicago truncatula]
gi|355490419|gb|AES71622.1| Ribonuclease 3-like protein [Medicago truncatula]
Length = 322
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 63/103 (61%), Gaps = 3/103 (2%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
++E+ + Y F++K L +AL+H TY A Y+RLE++GDA+++ L+ + ++ +L
Sbjct: 71 EVEEILGYEFKNKQLLEEALTHTTYGAE---NDYERLEYVGDAVLNLLMAREQFVSYPNL 127
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVT 217
PG ++ +RS V++ A A+ L ++L H P+L E V+
Sbjct: 128 KPGILTQLRSKNVDSEKLARVAINHGLDRYLRHKKPQLGEQVS 170
>gi|302693114|ref|XP_003036236.1| hypothetical protein SCHCODRAFT_31237 [Schizophyllum commune H4-8]
gi|300109932|gb|EFJ01334.1| hypothetical protein SCHCODRAFT_31237, partial [Schizophyllum commune
H4-8]
Length = 1342
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 64/108 (59%), Gaps = 1/108 (0%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
++L+ ++ YTF+D L +AL+H ++ + SY+RLEFLGDA+I+ V YLY F
Sbjct: 1087 SELQAKLGYTFRDGGLLCEALTHSSFASLDSYGSYERLEFLGDAVINLAVVDYLYRKFPD 1146
Query: 174 LSPGEISDIRSAMVNNVTFASYAVR-LDLHKHLLHDSPRLYENVTRFA 220
+ ++S R+ V N ++ +V+ L LHK +L ++ L + + A
Sbjct: 1147 ANSDQLSLPRARAVCNQALSALSVKHLQLHKSVLVNNVELSIAINKHA 1194
Score = 44.3 bits (103), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/90 (24%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 120 INYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEI 179
+ + ++ L+QAL+ P + + QRLE LGDA+++ T +L+ + H G++
Sbjct: 919 LGLPYIERDLLIQALTLPCAG---MPFNNQRLETLGDAVLELSTTVHLFNKYPHRHEGQL 975
Query: 180 SDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
+ +R ++N + A + L + L ++
Sbjct: 976 TPLRQICISNKCLLTRAREVQLERFLTSET 1005
>gi|424776467|ref|ZP_18203448.1| ribonuclease III [Alcaligenes sp. HPC1271]
gi|422888287|gb|EKU30676.1| ribonuclease III [Alcaligenes sp. HPC1271]
Length = 252
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 54/90 (60%), Gaps = 4/90 (4%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE I Y+F+D L QAL+H +++A +RLEFLGD++++F V A L++ F +
Sbjct: 7 LEAAIGYSFKDTGLLEQALTHRSHSARH----NERLEFLGDSVLNFTVAALLFDRFQRID 62
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G++S +R+ +V A A RL L +L
Sbjct: 63 EGDLSRLRANLVKQAALAEIATRLGLSDYL 92
>gi|335040133|ref|ZP_08533269.1| Ribonuclease 3 [Caldalkalibacillus thermarum TA2.A1]
gi|334179958|gb|EGL82587.1| Ribonuclease 3 [Caldalkalibacillus thermarum TA2.A1]
Length = 234
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 58/91 (63%), Gaps = 3/91 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
+ RI +F+D++ L+QA +H +Y + ++ +RLEFLGDA+++ V+ YLY++F
Sbjct: 10 FQNRIGVSFKDETLLIQAFTHSSYVNEHKDKALKDNERLEFLGDAVLELTVSQYLYKHFQ 69
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHK 203
+S GE++ +R+A+V + +A L+ K
Sbjct: 70 TMSEGEMTKLRAAIVCEPSLVKFAHELEFGK 100
>gi|295094866|emb|CBK83957.1| RNAse III [Coprococcus sp. ART55/1]
Length = 229
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 60/96 (62%), Gaps = 5/96 (5%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRI----TTSYQRLEFLGDAIIDFLVTAYLYEN 170
+LEKRI Y F+D L+ AL+H ++ AN + T SY+RLEFLGDAI++++V+ YL+
Sbjct: 7 ELEKRIGYEFKDIRLLITALTHTSF-ANELKVNKTESYERLEFLGDAILEYIVSDYLFRK 65
Query: 171 FSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G+++ +R+++V T + + L K +L
Sbjct: 66 KREYEEGKLTKLRASLVCEFTLSQISESLGYGKFVL 101
>gi|440683448|ref|YP_007158243.1| Ribonuclease 3 [Anabaena cylindrica PCC 7122]
gi|428680567|gb|AFZ59333.1| Ribonuclease 3 [Anabaena cylindrica PCC 7122]
Length = 395
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 124 FQDKSFLLQALSHPTYN-ANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDI 182
F+D + L ++L+H +Y NRI ++LEFLGD I+ FL AY+YE + +S GE+S +
Sbjct: 178 FEDVTLLERSLTHRSYAYENRINKDNEQLEFLGDCILGFLAGAYIYEQYGDISEGELSKL 237
Query: 183 RSAMVNNVTFASYAVRLDLHKHLL 206
+ +V+N A A +L+L + LL
Sbjct: 238 KERLVDNPQLAKLANQLNLGQWLL 261
>gi|163856074|ref|YP_001630372.1| ribonuclease III [Bordetella petrii DSM 12804]
gi|229564350|sp|A9IIJ2.1|RNC_BORPD RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|163259802|emb|CAP42103.1| Ribonuclease III [Bordetella petrii]
Length = 252
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 58/90 (64%), Gaps = 4/90 (4%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LE R+++ F + + L QAL+H +++A +RLEFLGD++++F+V A L+E F L
Sbjct: 6 LETRLDHRFGNAALLEQALTHRSHSARH----NERLEFLGDSVLNFVVAAMLFERFPKLD 61
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G++S +R+ +V + A RL+L ++L
Sbjct: 62 EGDLSRLRANLVKQASLADIGQRLELSQYL 91
>gi|334143980|ref|YP_004537136.1| ribonuclease 3 [Thioalkalimicrobium cyclicum ALM1]
gi|333964891|gb|AEG31657.1| Ribonuclease 3 [Thioalkalimicrobium cyclicum ALM1]
Length = 231
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 58/91 (63%), Gaps = 4/91 (4%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
QL R+ Y+FQD+++L AL+H + A + +RLEFLGD++++F++ L+E F++L
Sbjct: 13 QLSTRLGYSFQDETWLELALTHRSAGAK----NNERLEFLGDSLVNFIIADLLFEQFTNL 68
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G++S IR+ +V T A + +L L L
Sbjct: 69 PEGDLSRIRAHLVKGETLAKLSRKLALSDML 99
>gi|328543513|ref|YP_004303622.1| ribonuclease III [Polymorphum gilvum SL003B-26A1]
gi|326413257|gb|ADZ70320.1| Ribonuclease III [Polymorphum gilvum SL003B-26A1]
Length = 234
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 116 LEKRINYTFQDKSFLLQALSHPT-YNANRIT-TSYQRLEFLGDAIIDFLVTAYLYENFSH 173
LE R+ Y+FQDK+ L+QAL+H + NA SYQRLEFLGD ++ V L+ +F
Sbjct: 12 LEGRLGYSFQDKALLMQALTHASALNAGGAARGSYQRLEFLGDRVLGLAVATMLHRHFPL 71
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
GE++ + MV T A A+ LDL + +
Sbjct: 72 ADEGELARRLNHMVKRETCADIALELDLGEAM 103
>gi|118474451|ref|YP_892860.1| ribonuclease III [Campylobacter fetus subsp. fetus 82-40]
gi|261885507|ref|ZP_06009546.1| ribonuclease III [Campylobacter fetus subsp. venerealis str.
Azul-94]
gi|189043299|sp|A0RRM7.1|RNC_CAMFF RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|118413677|gb|ABK82097.1| ribonuclease III [Campylobacter fetus subsp. fetus 82-40]
Length = 223
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+ + +LE+ + Y F++K+ L +AL+H + + + + +RLEFLGDA++D +V YL+
Sbjct: 1 MDKLNRLEEHLGYKFKNKTLLKEALTHKSMKS---SVNNERLEFLGDAVLDLIVGEYLFF 57
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
F G +S +R+A+VN +FAS + ++ L
Sbjct: 58 KFKDTDEGNLSKLRAALVNEKSFASISSQIRL 89
>gi|344199888|ref|YP_004784214.1| ribonuclease 3 [Acidithiobacillus ferrivorans SS3]
gi|343775332|gb|AEM47888.1| Ribonuclease 3 [Acidithiobacillus ferrivorans SS3]
Length = 226
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 58/103 (56%), Gaps = 4/103 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
L+K + Y F+++S L QAL+H + A +RLEFLGDA ++F+V A LY F +S
Sbjct: 7 LQKSVGYHFREQSLLSQALTHRSAGAQH----NERLEFLGDAALNFVVAAKLYARFPKVS 62
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTR 218
G++S +R+ +V T A A ++ L L+ S + R
Sbjct: 63 EGDLSRMRARLVREETLAEIAGKIALADFLILGSGEIRSGGAR 105
>gi|416156636|ref|ZP_11604675.1| ribonuclease III [Moraxella catarrhalis 101P30B1]
gi|416225814|ref|ZP_11626993.1| ribonuclease III [Moraxella catarrhalis 103P14B1]
gi|416233905|ref|ZP_11629503.1| ribonuclease III [Moraxella catarrhalis 12P80B1]
gi|416245733|ref|ZP_11634652.1| ribonuclease III [Moraxella catarrhalis BC8]
gi|416256350|ref|ZP_11639661.1| ribonuclease III [Moraxella catarrhalis O35E]
gi|326560591|gb|EGE10972.1| ribonuclease III [Moraxella catarrhalis 103P14B1]
gi|326565582|gb|EGE15745.1| ribonuclease III [Moraxella catarrhalis 12P80B1]
gi|326572025|gb|EGE22027.1| ribonuclease III [Moraxella catarrhalis BC8]
gi|326573972|gb|EGE23922.1| ribonuclease III [Moraxella catarrhalis O35E]
gi|326574964|gb|EGE24894.1| ribonuclease III [Moraxella catarrhalis 101P30B1]
Length = 262
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
L ++ YTF+D S L +AL+H +Y+ + SY+RLEFLGDA++ ++T L+ +
Sbjct: 35 LYAKLGYTFKDVSLLCRALTHRSYDPKK---SYERLEFLGDALLSSIITKALFAQYPKHD 91
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G+++ +R+A+V T A L+L +HL+
Sbjct: 92 EGKLTRMRAALVRQETLVQIADHLELSRHLI 122
>gi|429737440|ref|ZP_19271303.1| ribonuclease III [Selenomonas sp. oral taxon 138 str. F0429]
gi|429152615|gb|EKX95432.1| ribonuclease III [Selenomonas sp. oral taxon 138 str. F0429]
Length = 238
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 58/94 (61%), Gaps = 2/94 (2%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYN--ANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
+L +I +F D S L +AL+HP+Y A +RLEFLGDA+++ + YLY +F
Sbjct: 15 RLSVQIGVSFGDLSLLDEALTHPSYTNEAKDDIPHNERLEFLGDAVLELASSTYLYAHFP 74
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
S GE++ +R+++V + T A A +LDL +LL
Sbjct: 75 ECSEGELTKMRASLVQSETLARLARQLDLGSYLL 108
>gi|169824545|ref|YP_001692156.1| ribonuclease III [Finegoldia magna ATCC 29328]
gi|302380368|ref|ZP_07268838.1| ribonuclease III [Finegoldia magna ACS-171-V-Col3]
gi|303233642|ref|ZP_07320296.1| ribonuclease III [Finegoldia magna BVS033A4]
gi|417926170|ref|ZP_12569578.1| ribonuclease III [Finegoldia magna SY403409CC001050417]
gi|167831350|dbj|BAG08266.1| ribonuclease III [Finegoldia magna ATCC 29328]
gi|302311858|gb|EFK93869.1| ribonuclease III [Finegoldia magna ACS-171-V-Col3]
gi|302495076|gb|EFL54828.1| ribonuclease III [Finegoldia magna BVS033A4]
gi|341589983|gb|EGS33236.1| ribonuclease III [Finegoldia magna SY403409CC001050417]
Length = 238
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 66/106 (62%), Gaps = 4/106 (3%)
Query: 104 LDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY-NANRI--TTSYQRLEFLGDAIID 160
+D R I + +LE++++Y F D + L A H +Y N N+ S +RLEFLGD+++D
Sbjct: 1 MDKAR-IEKLHELEEKLDYRFTDINLLNLAFFHSSYGNENKAYKNISNERLEFLGDSVLD 59
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+V+ +LY + S L G ++ IRS MV +F++ A L+L K+L+
Sbjct: 60 LVVSDFLYNSKSSLKEGAMTKIRSQMVCEKSFSNMAKYLELGKYLM 105
>gi|104783263|ref|YP_609761.1| ribonuclease III [Pseudomonas entomophila L48]
gi|122402118|sp|Q1I5V8.1|RNC_PSEE4 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|95112250|emb|CAK16977.1| ribonuclease III, ds RNA [Pseudomonas entomophila L48]
Length = 229
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+LE+++ YTF+++ +L AL+H +Y + +RLEFLGDAI++F+V L+E F
Sbjct: 7 RLERKLGYTFKNQDQMLLALTHRSYAGR----NNERLEFLGDAILNFVVGEALFERFPQA 62
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A DL +L S L
Sbjct: 63 REGQLSRLRARLVKGETLARLARGFDLGDYLRLGSGEL 100
>gi|384156209|ref|YP_005539024.1| ribonuclease III [Arcobacter butzleri ED-1]
gi|345469763|dbj|BAK71214.1| ribonuclease III [Arcobacter butzleri ED-1]
Length = 224
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 63/97 (64%), Gaps = 3/97 (3%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+ + ++LEK ++Y F++K+ +++AL+H ++ + + +RLEFLGDA+++ +V YLY
Sbjct: 1 MSDYSKLEKCLDYQFKNKNLIIEALTHKSF---KKPYNNERLEFLGDAVLNLIVGEYLYL 57
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
F + GE+S IR+++VN F A + L +++
Sbjct: 58 KFPKSNEGELSKIRASLVNETGFTRLANEIKLGEYIF 94
>gi|296113914|ref|YP_003627852.1| ribonuclease III [Moraxella catarrhalis RH4]
gi|295921608|gb|ADG61959.1| ribonuclease III [Moraxella catarrhalis BBH18]
Length = 266
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
L ++ YTF+D S L +AL+H +Y+ + SY+RLEFLGDA++ ++T L+ +
Sbjct: 39 LYAKLGYTFKDVSLLCRALTHRSYDPKK---SYERLEFLGDALLSSIITKALFAQYPKHD 95
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G+++ +R+A+V T A L+L +HL+
Sbjct: 96 EGKLTRMRAALVRQETLVQIADHLELSRHLI 126
>gi|404476274|ref|YP_006707705.1| ribonuclease III [Brachyspira pilosicoli B2904]
gi|404437763|gb|AFR70957.1| ribonuclease III [Brachyspira pilosicoli B2904]
Length = 189
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Query: 117 EKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
EK + Y+F++K++LL+A++H TY N N QRLEFLGD+++ +++ ++Y+ ++++
Sbjct: 10 EKVLQYSFKNKNYLLEAITHRTYANENGNMKYNQRLEFLGDSVLSLIISEHIYKEYNNVK 69
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G++S I++ +V+ T A+ + +L L LL
Sbjct: 70 EGKLSKIKAYLVSQNTLANISRKLKLGDFLL 100
>gi|365902819|ref|ZP_09440642.1| ribonuclease III [Lactobacillus malefermentans KCTC 3548]
Length = 232
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 56/84 (66%), Gaps = 3/84 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
L + N F+D+S L +AL+ +Y + N+ Y+R+EFLGDA++ F+V+ Y+++ +
Sbjct: 9 LAENFNIVFKDESLLDEALTQASYVNEHPNQNLKFYERIEFLGDAVMQFVVSEYIFKRYP 68
Query: 173 HLSPGEISDIRSAMVNNVTFASYA 196
L G ++ +R+AMVN +FAS+A
Sbjct: 69 QLPQGRLTRLRAAMVNEESFASFA 92
>gi|157737847|ref|YP_001490531.1| ribonuclease III [Arcobacter butzleri RM4018]
gi|315637636|ref|ZP_07892842.1| ribonuclease III [Arcobacter butzleri JV22]
gi|189043289|sp|A8EV88.1|RNC_ARCB4 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|157699701|gb|ABV67861.1| ribonuclease III [Arcobacter butzleri RM4018]
gi|315478090|gb|EFU68817.1| ribonuclease III [Arcobacter butzleri JV22]
Length = 224
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 63/97 (64%), Gaps = 3/97 (3%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
+ + ++LEK ++Y F++K+ +++AL+H ++ + + +RLEFLGDA+++ +V YLY
Sbjct: 1 MSDYSKLEKCLDYQFKNKNLIIEALTHKSF---KKPYNNERLEFLGDAVLNLIVGEYLYL 57
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
F + GE+S IR+++VN F A + L +++
Sbjct: 58 KFPKSNEGELSKIRASLVNETGFTRLANEIKLGEYIF 94
>gi|83858196|ref|ZP_00951718.1| ribonuclease III [Oceanicaulis sp. HTCC2633]
gi|83853019|gb|EAP90871.1| ribonuclease III [Oceanicaulis sp. HTCC2633]
Length = 228
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRI-TTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
E RINY F+D+ L +AL+H ++ R S +RLEFLGD ++ + + LYE F +L
Sbjct: 8 FEARINYRFKDRELLERALTHASHGDGRSRAASNERLEFLGDRVLGLMASQRLYETFPNL 67
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G ++ +A+VN A A R DL + L
Sbjct: 68 EEGGLAQRLNAVVNKSACARAARRCDLGEGL 98
>gi|429847845|gb|ELA23398.1| dicer-like protein 2 [Colletotrichum gloeosporioides Nara gc5]
Length = 1453
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 22/158 (13%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAM--------LFLQALNILPQSKIDVHEALYGPH 91
++ K +AD+VE+L G + G +G + +FLQ + + D + LY
Sbjct: 1080 RISTKTLADIVEALIGASMIDGGEDGGLSKALDCMSIFLQQIKW--RRIDDCRQLLYDVA 1137
Query: 92 PSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRL 151
P V P L PL E+ I Y F KS L+Q+++H + N +RL
Sbjct: 1138 PDNVELPST---LKPL---------EELIGYDFDKKSLLIQSMTHASSNFGNPLGCLERL 1185
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
EF+GDA++D+++ L+ HLS + +++A+VN
Sbjct: 1186 EFIGDAVLDYIIVNRLFSIRPHLSHQSMHLLKTAVVNG 1223
>gi|336452822|ref|YP_004607288.1| ribonuclease III [Helicobacter bizzozeronii CIII-1]
gi|335332849|emb|CCB79576.1| ribonuclease III [Helicobacter bizzozeronii CIII-1]
Length = 223
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
L++ + Y F+D L QAL+H + A++ + +RLEFLGDA++D +V L+ F L
Sbjct: 5 LQECLGYAFKDPDLLQQALTHRSAKAHK---NNERLEFLGDAVLDLVVAEILFARFGDLQ 61
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G++S +R+++VN F A+ L+L H+L
Sbjct: 62 EGDLSKMRASLVNEKAFFKLALLLNLQDHIL 92
>gi|158706450|sp|A2QX45.2|DCL22_ASPNC RecName: Full=Dicer-like protein 2-2; Includes: RecName:
Full=Endoribonuclease dcl2-2; Includes: RecName:
Full=ATP-dependent helicase dcl2-2
Length = 1362
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 105/220 (47%), Gaps = 27/220 (12%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+G +AD+ +++ G G+ A A + P+ K +L+ S R PE
Sbjct: 1012 IGAATLADMTKAVVGAAFTDGGLNQAAAC--ASVMFPKLKSWNASSLHDGTYSKTR-PEN 1068
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
A + +E+ + YTF DKS +++++HP+ TTSY+RL FLG ++++
Sbjct: 1069 AVASTAI------VDMEELLGYTFTDKSLAVESMTHPSCTGLVQTTSYRRLSFLGASVLE 1122
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRL---------------DLHKHL 205
++V +YL+ + ++P + ++SA NN A+ ++HK++
Sbjct: 1123 WIVVSYLHRHAQVMNPQRMQSLKSAFTNNTFLTFIAITFHQVREQNHIDVDDEHNVHKNV 1182
Query: 206 LHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVR 245
S RL++ + + +A + E+SD ++ E+ ++
Sbjct: 1183 TTCSIRLWDFLRL---HSDALSTELSDFVQKSSEKADAIK 1219
>gi|134079420|emb|CAK40801.1| unnamed protein product [Aspergillus niger]
Length = 1379
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 104/220 (47%), Gaps = 27/220 (12%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+G +AD+ +++ G G+ A + P+ K +L+ S R PE
Sbjct: 1029 IGAATLADMTKAVVGAAFTDGGLNQAAACASVM--FPKLKSWNASSLHDGTYSKTR-PEN 1085
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
A + +E+ + YTF DKS +++++HP+ TTSY+RL FLG ++++
Sbjct: 1086 AVASTAI------VDMEELLGYTFTDKSLAVESMTHPSCTGLVQTTSYRRLSFLGASVLE 1139
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRL---------------DLHKHL 205
++V +YL+ + ++P + ++SA NN A+ ++HK++
Sbjct: 1140 WIVVSYLHRHAQVMNPQRMQSLKSAFTNNTFLTFIAITFHQVREQNHIDVDDEHNVHKNV 1199
Query: 206 LHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVR 245
S RL++ + + +A + E+SD ++ E+ ++
Sbjct: 1200 TTCSIRLWDFLRL---HSDALSTELSDFVQKSSEKADAIK 1236
>gi|421504665|ref|ZP_15951606.1| ribonuclease III [Pseudomonas mendocina DLHK]
gi|400344623|gb|EJO92992.1| ribonuclease III [Pseudomonas mendocina DLHK]
Length = 229
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 60/102 (58%), Gaps = 4/102 (3%)
Query: 111 PECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYEN 170
P ++LE+++ Y+F+D+ ++ AL+H ++ + +RLEFLGDAI++F+ L+E
Sbjct: 3 PNLSRLERKLGYSFKDQDLMILALTHRSFAGR----NNERLEFLGDAILNFVAGEALFER 58
Query: 171 FSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
F G++S +R+ +V T A A +L ++L S L
Sbjct: 59 FPQAREGQLSRLRARLVKGETLAVLARGFELGEYLRLGSGEL 100
>gi|359783025|ref|ZP_09286243.1| ribonuclease III [Pseudomonas psychrotolerans L19]
gi|359369171|gb|EHK69744.1| ribonuclease III [Pseudomonas psychrotolerans L19]
Length = 229
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+LE+R+ YTF+D +L AL+H ++ + +RLEFLGDAI++F++ LY++F
Sbjct: 7 RLERRLGYTFKDPDLMLLALTHRSFAGR----NNERLEFLGDAILNFIIGEALYDHFPQA 62
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A +L +L S L
Sbjct: 63 REGQLSRLRAKLVKGETLALLARSFELGDYLRLGSGEL 100
>gi|198283249|ref|YP_002219570.1| Ribonuclease III [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218665431|ref|YP_002425832.1| ribonuclease III [Acidithiobacillus ferrooxidans ATCC 23270]
gi|198247770|gb|ACH83363.1| Ribonuclease III [Acidithiobacillus ferrooxidans ATCC 53993]
gi|218517644|gb|ACK78230.1| ribonuclease III [Acidithiobacillus ferrooxidans ATCC 23270]
Length = 226
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
L++ + Y F+++S LLQAL+H + A +RLEFLGDA ++F+V A L+ F +S
Sbjct: 7 LQQSVGYQFREQSLLLQALTHRSAGAR----HNERLEFLGDAALNFVVAAKLFARFPKVS 62
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G++S +R+ +V T A A ++ L L+
Sbjct: 63 EGDLSRMRARLVREETLAEIAGKIALADSLI 93
>gi|392426870|ref|YP_006467864.1| ribonuclease III [Desulfosporosinus acidiphilus SJ4]
gi|391356833|gb|AFM42532.1| ribonuclease III [Desulfosporosinus acidiphilus SJ4]
Length = 262
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
L KR+ + AL+HP+Y N + QRLEFLGDAI+DF++ YLY N+
Sbjct: 37 LAKRLGLDTPPNRLFITALTHPSYVFENPQFGRENNQRLEFLGDAILDFVIAEYLYLNYP 96
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
GE++ +R+A+VN T A A + L + LL
Sbjct: 97 DRPEGELTKMRAAVVNETTLAHKARDISLGQELL 130
>gi|350631467|gb|EHA19838.1| hypothetical protein ASPNIDRAFT_119009 [Aspergillus niger ATCC 1015]
Length = 1232
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/220 (23%), Positives = 104/220 (47%), Gaps = 27/220 (12%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+G +AD+ +++ G G+ A + P+ K +L+ S R PE
Sbjct: 947 IGAATLADMTKAVVGAAFTDGGLNQAAACASVM--FPKLKSWNASSLHDGTYSKTR-PEN 1003
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
A + +E+ + YTF DKS +++++HP+ TTSY+RL FLG ++++
Sbjct: 1004 AVASTAI------VDMEELLGYTFTDKSLAVESMTHPSCTGLVQTTSYRRLSFLGASVLE 1057
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRL---------------DLHKHL 205
++V +YL+ + ++P + ++SA NN A+ ++HK++
Sbjct: 1058 WIVVSYLHRHAQVMNPQRMQSLKSAFTNNTFLTFIAITFHQVREQNHIDVDDEHNVHKNV 1117
Query: 206 LHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVR 245
S RL++ + + +A + E+SD ++ E+ ++
Sbjct: 1118 TTCSIRLWDFLRL---HSDALSTELSDFVQKSSEKADAIK 1154
>gi|392545908|ref|ZP_10293045.1| RNase III, ds RNA [Pseudoalteromonas rubra ATCC 29570]
Length = 225
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 4/92 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
T+L K+I Y F D+S L QA++H ++ +RLEFLGD+I+ F++ LY+ F
Sbjct: 6 TELYKKIGYEFTDQSLLEQAMTHRSHKGQH----NERLEFLGDSILSFVIANALYKQFPK 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G++S +RS +V T A + V L +L
Sbjct: 62 AREGDLSRMRSTLVRGQTLAEFGVEFGLGDYL 93
>gi|330502445|ref|YP_004379314.1| ribonuclease III [Pseudomonas mendocina NK-01]
gi|328916731|gb|AEB57562.1| ribonuclease III [Pseudomonas mendocina NK-01]
Length = 229
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 60/102 (58%), Gaps = 4/102 (3%)
Query: 111 PECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYEN 170
P ++LE+++ Y+F+D+ ++ AL+H ++ + +RLEFLGDAI++F+ L+E
Sbjct: 3 PNLSRLERKLGYSFKDQDLMVLALTHRSFAGR----NNERLEFLGDAILNFVAGEALFER 58
Query: 171 FSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
F G++S +R+ +V T A A +L ++L S L
Sbjct: 59 FPQAREGQLSRLRARLVKGETLAVLARGFELGEYLRLGSGEL 100
>gi|157825292|ref|YP_001493012.1| ribonuclease III [Rickettsia akari str. Hartford]
gi|189043339|sp|A8GM79.1|RNC_RICAH RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|157799250|gb|ABV74504.1| ribonuclease III [Rickettsia akari str. Hartford]
Length = 227
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPT---YNANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
LEK + Y+F+++ L++ALSHP+ ++ + Y+RLEFLGDA+++ +VT L+ NF+
Sbjct: 7 LEKLLGYSFKNQELLIEALSHPSLRQHHEYKYDKDYERLEFLGDAVLNLVVTEILFRNFA 66
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ G ++ IRS +V T +L L +++
Sbjct: 67 SYNEGNLAKIRSYLVCKETICVVGTKLTLKDYII 100
>gi|421881985|ref|ZP_16313281.1| Ribonuclease III [Helicobacter bizzozeronii CCUG 35545]
gi|375315857|emb|CCF81277.1| Ribonuclease III [Helicobacter bizzozeronii CCUG 35545]
Length = 223
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 57/91 (62%), Gaps = 3/91 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
L++ + Y F+D L QAL+H + A++ + +RLEFLGDA++D +V L+ F L
Sbjct: 5 LQECLGYVFKDPDLLQQALTHRSAKAHK---NNERLEFLGDAVLDLVVAEILFARFGDLQ 61
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G++S +R+++VN F A+ L+L H+L
Sbjct: 62 EGDLSKMRASLVNEKAFFKLALLLNLQDHIL 92
>gi|453080784|gb|EMF08834.1| P-loop containing nucleoside triphosphate hydrolase protein
[Mycosphaerella populorum SO2202]
Length = 1400
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 74/152 (48%), Gaps = 18/152 (11%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKI--DVHEALYGPHPSAVRC 97
++ K +ADVVE+L G E A ++ L LPQ K D E L C
Sbjct: 1025 QMSTKTLADVVEALIGAAYLEGDTEKAFQCIRVL--LPQEKWSNDCFETLIA---ELTAC 1079
Query: 98 PEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDA 157
P + LE I +TF + L++A +H + AN+ SY+RLEFLGD+
Sbjct: 1080 P-----------VANVLLLETLIGHTFSHPTLLVEATTHGSCPANKTGMSYERLEFLGDS 1128
Query: 158 IIDFLVTAYLYENFSHLSPGEISDIRSAMVNN 189
++D ++T L+ + L ++ + +A+VN+
Sbjct: 1129 VLDMIITPKLFSHPRKLKHWQLHSVHAALVNS 1160
>gi|242090101|ref|XP_002440883.1| hypothetical protein SORBIDRAFT_09g013160 [Sorghum bicolor]
gi|241946168|gb|EES19313.1| hypothetical protein SORBIDRAFT_09g013160 [Sorghum bicolor]
Length = 377
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 78/168 (46%), Gaps = 30/168 (17%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
++E+ + Y F D++ L +AL+H +++ SYQRLEF+GDA + + +LY L
Sbjct: 44 RVERLLRYQFCDRALLEEALTHQSFSDGAF--SYQRLEFVGDAALGLAFSNFLYLTNPTL 101
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEE 234
PG +S +R+A ++ A AVR DL+ L RL V +F E+ E+
Sbjct: 102 GPGALSTLRAANISTEKLARVAVRHDLYPLLRRKCARLDLLVGQFI---ESVKQEVMH-- 156
Query: 235 EEEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEAL 282
D+ T YG V V PK L D+ EA+
Sbjct: 157 ---------------------DLATAPYGGSV--VKAPKVLADIVEAI 181
>gi|403378845|ref|ZP_10920902.1| hypothetical protein PJC66_03345 [Paenibacillus sp. JC66]
Length = 232
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 62/98 (63%), Gaps = 3/98 (3%)
Query: 112 ECTQLEKRINYTFQDKSFLLQALSHPTY-NANRITTSY--QRLEFLGDAIIDFLVTAYLY 168
E TQL+ + F + L QA +H +Y N NR++ S +RLEFLGDA+++ V+ YLY
Sbjct: 4 EFTQLQSALGIEFHNLKLLKQAFTHSSYVNENRVSGSKDNERLEFLGDAVLELTVSEYLY 63
Query: 169 ENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ F + S GE++ +R+++V + ++A +L +++L
Sbjct: 64 DIFPNRSEGELTKLRASIVCEPSLVTFAEQLQFGRYVL 101
>gi|304316939|ref|YP_003852084.1| ribonuclease III [Thermoanaerobacterium thermosaccharolyticum DSM
571]
gi|302778441|gb|ADL69000.1| ribonuclease III [Thermoanaerobacterium thermosaccharolyticum DSM
571]
Length = 232
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 56/93 (60%), Gaps = 2/93 (2%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTY--NANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
LEK I Y F +K L AL+H ++ + I S +RLEFLGD+++ +++ YLY++ S
Sbjct: 10 LEKNIGYVFNNKKLLKNALAHSSWANESKNIGISNERLEFLGDSVLSIIISEYLYKSRSD 69
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
L G +S RS +V + A A ++L K+LL
Sbjct: 70 LEEGYLSKYRSEIVCEPSLARCAREIELGKYLL 102
>gi|239610437|gb|EEQ87424.1| dicer-like protein 2 [Ajellomyces dermatitidis ER-3]
Length = 1509
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 25/157 (15%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAM--------LFLQALNILPQSKIDVHEALYGPH 91
++ K +ADVVE+L G + IEG +FL + +P D ALY
Sbjct: 1112 EMTTKTLADVVEALLG----AATIEGGETKTEKCLEIFLPEIRWMPFD--DRINALYNSV 1165
Query: 92 PSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRL 151
P A E R ++E + Y+F K FL+QA +HP+ N T+SYQRL
Sbjct: 1166 PEAY---ENIR-------TSWFQEIESLLGYSFNKKVFLVQAFTHPS-NPGSTTSSYQRL 1214
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
EF+GDAI+D ++ +L+ + +L ++ +R+A+ N
Sbjct: 1215 EFVGDAILDHIIVHHLFNSSRNLPHFDMHLMRTALAN 1251
Score = 41.6 bits (96), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 115 QLEKRI--NYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
QL K I F D S ++ A+S + R T+YQR+EFLGD+I+ F T L
Sbjct: 993 QLNKTILKPVAFTDLSLVVTAIS---ASVAREATNYQRIEFLGDSILKFHTTLQLSAANL 1049
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
G +S + +V+N + AV L K +L D
Sbjct: 1050 VWHEGLLSRAKDNVVSNKRLSYAAVETGLDKFILVD 1085
>gi|433655086|ref|YP_007298794.1| ribonuclease III [Thermoanaerobacterium thermosaccharolyticum
M0795]
gi|433293275|gb|AGB19097.1| ribonuclease III [Thermoanaerobacterium thermosaccharolyticum
M0795]
Length = 232
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 56/94 (59%), Gaps = 2/94 (2%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTY--NANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
LEK I Y F +K L AL+H ++ + I S +RLEFLGD+++ +++ YLY++ S
Sbjct: 9 NLEKNIGYVFNNKKLLKNALAHSSWANESKNIGISNERLEFLGDSVLSIIISEYLYKSRS 68
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
L G +S RS +V + A A ++L K+LL
Sbjct: 69 DLEEGYLSKYRSEIVCEPSLARCAREIELGKYLL 102
>gi|83644632|ref|YP_433067.1| ribonuclease III [Hahella chejuensis KCTC 2396]
gi|123534042|sp|Q2SL32.1|RNC_HAHCH RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|83632675|gb|ABC28642.1| ribonuclease III [Hahella chejuensis KCTC 2396]
Length = 226
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+L++ + YTF++ + L AL+H ++ + +RLEFLGD++++F++ YL+ F
Sbjct: 7 RLQRALGYTFKEPALLTLALTHRSFGGR----NNERLEFLGDSVLNFIIADYLFGRFEEA 62
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G++S +R+ MV VT A A DL ++L
Sbjct: 63 REGQLSRLRARMVKGVTLAEIAREFDLGEYL 93
>gi|239624036|ref|ZP_04667067.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239522067|gb|EEQ61933.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 235
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 63/95 (66%), Gaps = 3/95 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTY-NANRITTSY--QRLEFLGDAIIDFLVTAYLYENF 171
+LE+RI+Y F+D+S QAL+H +Y N +R+ S +RLEFLGDA+++ + + +LY +
Sbjct: 7 ELEERIDYQFKDQSLFSQALTHSSYANEHRLDHSRCNERLEFLGDAVLEIVTSDFLYHKY 66
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ L G+++ IR+++V T A A + L ++L
Sbjct: 67 ATLPEGDLTKIRASIVCEPTLAYCAGDIRLGEYLF 101
>gi|297588527|ref|ZP_06947170.1| ribonuclease III [Finegoldia magna ATCC 53516]
gi|297573900|gb|EFH92621.1| ribonuclease III [Finegoldia magna ATCC 53516]
Length = 238
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 65/106 (61%), Gaps = 4/106 (3%)
Query: 104 LDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIID 160
+D R I + +LE++++Y F D + L A H +Y N + S +RLEFLGD+++D
Sbjct: 1 MDKAR-IEKLHELEEKLDYRFTDINLLNLAFFHSSYGNENKSYKDISNERLEFLGDSVLD 59
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+V+ +LY + S L G ++ IRS MV +F++ A L+L K+L+
Sbjct: 60 LIVSDFLYNSKSSLKEGAMTKIRSQMVCEKSFSNMAKYLELGKYLM 105
>gi|317033008|ref|XP_001394728.2| hypothetical protein ANI_1_2258094 [Aspergillus niger CBS 513.88]
Length = 889
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 105/220 (47%), Gaps = 27/220 (12%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+G +AD+ +++ G G+ A A + P+ K +L+ S R PE
Sbjct: 539 IGAATLADMTKAVVGAAFTDGGLNQAAAC--ASVMFPKLKSWNASSLHDGTYSKTR-PEN 595
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
A + +E+ + YTF DKS +++++HP+ TTSY+RL FLG ++++
Sbjct: 596 AVASTAI------VDMEELLGYTFTDKSLAVESMTHPSCTGLVQTTSYRRLSFLGASVLE 649
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRL---------------DLHKHL 205
++V +YL+ + ++P + ++SA NN A+ ++HK++
Sbjct: 650 WIVVSYLHRHAQVMNPQRMQSLKSAFTNNTFLTFIAITFHQVREQNHIDVDDEHNVHKNV 709
Query: 206 LHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVR 245
S RL++ + + +A + E+SD ++ E+ ++
Sbjct: 710 TTCSIRLWDFLRL---HSDALSTELSDFVQKSSEKADAIK 746
>gi|261195592|ref|XP_002624200.1| dicer-like protein 2 [Ajellomyces dermatitidis SLH14081]
gi|239588072|gb|EEQ70715.1| dicer-like protein 2 [Ajellomyces dermatitidis SLH14081]
Length = 1509
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 25/157 (15%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAM--------LFLQALNILPQSKIDVHEALYGPH 91
++ K +ADVVE+L G + IEG +FL + +P D ALY
Sbjct: 1112 EMTTKTLADVVEALLG----AATIEGGETKTEKCLEIFLPEIRWMPFD--DRINALYNSV 1165
Query: 92 PSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRL 151
P A E R ++E + Y+F K FL+QA +HP+ N T+SYQRL
Sbjct: 1166 PEAY---ENIR-------TSWFQEIESLLGYSFNKKVFLVQAFTHPS-NPGSTTSSYQRL 1214
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
EF+GDAI+D ++ +L+ + +L ++ +R+A+ N
Sbjct: 1215 EFVGDAILDHIIVHHLFNSSRNLPHFDMHLMRTALAN 1251
Score = 41.2 bits (95), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 115 QLEKRI--NYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
QL K I F D S ++ A+S + R T+YQR+EFLGD+I+ F T L
Sbjct: 993 QLNKTILKPVAFTDLSLVVTAIS---ASVAREATNYQRIEFLGDSILKFHTTLQLSAANL 1049
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
G +S + +V+N + AV L K +L D
Sbjct: 1050 VWHEGLLSRAKDNVVSNKRLSYAAVETGLDKFILVD 1085
>gi|170720259|ref|YP_001747947.1| ribonuclease III [Pseudomonas putida W619]
gi|229564376|sp|B1J4E0.1|RNC_PSEPW RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|169758262|gb|ACA71578.1| Ribonuclease III [Pseudomonas putida W619]
Length = 229
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
+LE+++ YTF+D+ ++ AL+H +Y + +RLEFLGDAI++F+ L+E F
Sbjct: 6 ARLERKLGYTFKDQDQMVLALTHRSYAGR----NNERLEFLGDAILNFVAGEALFERFPQ 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A DL ++L S L
Sbjct: 62 AREGQLSRLRARLVKGETLARLARGFDLGEYLRLGSGEL 100
>gi|327349134|gb|EGE77991.1| dicer [Ajellomyces dermatitidis ATCC 18188]
Length = 1482
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 80/157 (50%), Gaps = 25/157 (15%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAM--------LFLQALNILPQSKIDVHEALYGPH 91
++ K +ADVVE+L G + IEG +FL + +P D ALY
Sbjct: 1086 EMTTKTLADVVEALLG----AATIEGGETKTEKCLEIFLPEIRWMPFD--DRINALYNSV 1139
Query: 92 PSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRL 151
P A E R ++E + Y+F K FL+QA +HP+ N T+SYQRL
Sbjct: 1140 PEAY---ENIR-------TSWFQEIESLLGYSFNKKVFLVQAFTHPS-NPGSTTSSYQRL 1188
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
EF+GDAI+D ++ +L+ + +L ++ +R+A+ N
Sbjct: 1189 EFVGDAILDHIIVHHLFNSSRNLPHFDMHLMRTALAN 1225
Score = 41.6 bits (96), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 5/96 (5%)
Query: 115 QLEKRI--NYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
QL K I F D S ++ A+S + R T+YQR+EFLGD+I+ F T L
Sbjct: 967 QLNKTILKPVAFTDLSLVVTAIS---ASVAREATNYQRIEFLGDSILKFHTTLQLSAANL 1023
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHD 208
G +S + +V+N + AV L K +L D
Sbjct: 1024 VWHEGLLSRAKDNVVSNKRLSYAAVETGLDKFILVD 1059
>gi|153810622|ref|ZP_01963290.1| hypothetical protein RUMOBE_01006 [Ruminococcus obeum ATCC 29174]
gi|149833018|gb|EDM88100.1| ribonuclease III [Ruminococcus obeum ATCC 29174]
Length = 223
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTY-NANRITT--SYQRLEFLGDAIIDFLVTAYLYENF 171
QLE+ I YTFQ+K L QAL+H +Y N ++ +RLEFLGDA+++ + + +LY F
Sbjct: 3 QLEQIIGYTFQNKKLLKQALTHSSYANEKKLGKLGCNERLEFLGDAVLELISSDFLYAKF 62
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ + GE++ R+++V + A A + L ++LL
Sbjct: 63 TQVPEGELTKKRASLVCEPSLAYCARQFGLPQYLL 97
>gi|333371186|ref|ZP_08463148.1| ribonuclease III [Desmospora sp. 8437]
gi|332976630|gb|EGK13471.1| ribonuclease III [Desmospora sp. 8437]
Length = 231
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 56/96 (58%), Gaps = 4/96 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQ----RLEFLGDAIIDFLVTAYLYE 169
+L + I + Q+K LQA +H ++ R +Q RLEFLGDA+++ V+ +LY
Sbjct: 4 AELGQTIGLSLQNKELFLQAFTHTSFAHERKGERHQPDNERLEFLGDAVLELTVSEHLYH 63
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
F HL G+++ +R+ +V + AS+A L+ KH+
Sbjct: 64 RFPHLKEGDLTRMRARIVCEPSLASFARDLNFGKHV 99
>gi|422651442|ref|ZP_16714237.1| ribonuclease III [Pseudomonas syringae pv. actinidiae str. M302091]
gi|330964520|gb|EGH64780.1| ribonuclease III [Pseudomonas syringae pv. actinidiae str. M302091]
Length = 227
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
++LE+++ YTF+D+ ++ AL+H ++ + +RLEFLGDAI++F+ L+E F
Sbjct: 6 SRLERQLGYTFKDQELMILALTHRSFAGR----NNERLEFLGDAILNFVAGEALFERFPQ 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A DL ++L S L
Sbjct: 62 AREGQLSRLRARLVKGETLALLARGFDLGEYLRLGSGEL 100
>gi|399116563|emb|CCG19370.1| ribonuclease 3 [Taylorella asinigenitalis 14/45]
Length = 251
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 59/90 (65%), Gaps = 4/90 (4%)
Query: 112 ECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+ T+L+K++NY F+D L +AL+H +Y+ +T +RLEFLGD+I++F V + L++
Sbjct: 2 KLTKLQKKLNYLFKDVQLLNRALTHRSYS----STHNERLEFLGDSILNFSVASILFKKL 57
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
+ G+++ IR++ VN T A A L+L
Sbjct: 58 KDQAEGDLTRIRASYVNQDTLAKIAQNLEL 87
>gi|358396694|gb|EHK46075.1| hypothetical protein TRIATDRAFT_292263 [Trichoderma atroviride IMI
206040]
Length = 1456
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 108/258 (41%), Gaps = 33/258 (12%)
Query: 41 LGDKVVADVVESLTGV-YLRSCGIEGAMLFLQALNILPQSKIDVHEAL-YGPHPSAVRCP 98
L K +ADV E+L G YL + ++A+ + S + H + + + + P
Sbjct: 1074 LSHKSIADVCEALIGAAYLTGKSNNSMDMAVKAVTAMVSS--ENHTMINFSDYRARYTTP 1131
Query: 99 EQARGLDPLRYIPECTQ------LEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRL 151
E Y P Q + + I Y FQ L A H +Y +I YQ+L
Sbjct: 1132 EWHT------YEPNAAQRNMVERIAEIIGYRFQCAPLLRSAFKHSSYVYEEKIRRDYQQL 1185
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL------ 205
EFLGDA+ID +V +LY F P +++ + AMV+N V+L L KHL
Sbjct: 1186 EFLGDALIDMVVVDFLYTRFPEADPKWLTEHKMAMVSNQFLGFLCVKLGLSKHLMLATSS 1245
Query: 206 LHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEKDVQTDVYGRV 265
LH R Y + A+ + + + ++G E V D + +
Sbjct: 1246 LHSLIREYTAEAKEAEEKAKGCRKPHGNKAAAGSDKGAS-------AEAPSVTLDFWAEI 1298
Query: 266 VEYVDVPKALGDVFEALV 283
+ PKAL DV EALV
Sbjct: 1299 QQ---PPKALADVVEALV 1313
>gi|300869947|ref|YP_003784818.1| ribonuclease III [Brachyspira pilosicoli 95/1000]
gi|300687646|gb|ADK30317.1| ribonuclease III [Brachyspira pilosicoli 95/1000]
Length = 229
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 63/91 (69%), Gaps = 1/91 (1%)
Query: 117 EKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
EK + Y+F++K++LL+A++H T+ N N QRLEFLGD+++ +++ ++Y+ ++++
Sbjct: 10 EKVLQYSFKNKNYLLEAITHRTFANENGNMKYNQRLEFLGDSVLSLIISEHIYKEYNNVK 69
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G++S I++ +V+ T A+ + +L L LL
Sbjct: 70 EGKLSKIKAYLVSQNTLANISRKLKLGDFLL 100
>gi|399010523|ref|ZP_10712894.1| ribonuclease III [Pseudomonas sp. GM17]
gi|398106871|gb|EJL96886.1| ribonuclease III [Pseudomonas sp. GM17]
Length = 225
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
++LE+++ YTF+D+ ++ AL+H ++ + +RLEFLGDAI++F+ L+E F
Sbjct: 2 SRLERQLGYTFKDQELMVLALTHRSFAGR----NNERLEFLGDAILNFVAGEALFERFPQ 57
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A DL ++L S L
Sbjct: 58 AREGQLSRLRARLVKGETLAVLARGFDLGEYLRLGSGEL 96
>gi|357462157|ref|XP_003601360.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355490408|gb|AES71611.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
Length = 783
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 63/107 (58%), Gaps = 1/107 (0%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
++E + Y F++ L +A +H TY A SY+RLE++GD++++ ++T + + L
Sbjct: 446 EVEAILEYEFKNILLLEEAFTHCTYGAEN-GLSYERLEYIGDSVLNLMITTEQFHAYPTL 504
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQ 221
+PG ++ +R+A V+ A A++ LH+++ H P L + + F +
Sbjct: 505 APGHLTRLRAANVDTEKLARVAIKYGLHRYVRHKKPLLGDEIQAFIK 551
>gi|389683135|ref|ZP_10174467.1| ribonuclease III [Pseudomonas chlororaphis O6]
gi|425897700|ref|ZP_18874291.1| ribonuclease III [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|388552648|gb|EIM15909.1| ribonuclease III [Pseudomonas chlororaphis O6]
gi|397891970|gb|EJL08448.1| ribonuclease III [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
Length = 229
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
++LE+++ YTF+D+ ++ AL+H ++ + +RLEFLGDAI++F+ L+E F
Sbjct: 6 SRLERQLGYTFKDQELMVLALTHRSFAGR----NNERLEFLGDAILNFVAGEALFERFPQ 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A DL ++L S L
Sbjct: 62 AREGQLSRLRARLVKGETLAVLARGFDLGEYLRLGSGEL 100
>gi|253827732|ref|ZP_04870617.1| ribonuclease III [Helicobacter canadensis MIT 98-5491]
gi|313141944|ref|ZP_07804137.1| ribonuclease III [Helicobacter canadensis MIT 98-5491]
gi|253511138|gb|EES89797.1| ribonuclease III [Helicobacter canadensis MIT 98-5491]
gi|313130975|gb|EFR48592.1| ribonuclease III [Helicobacter canadensis MIT 98-5491]
Length = 224
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
++ + Y F +++ L +AL+H + + +T +RLEFLGDA++D ++ +LY+ F H
Sbjct: 6 FQQYLGYHFSNQNLLQEALTHKS---AKKSTHNERLEFLGDAVLDLIIGEFLYKKFPHSP 62
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
GE+S +R++MVN FA A L++ ++L
Sbjct: 63 EGELSKMRASMVNEKAFAKIARYLNIGEYL 92
>gi|323489554|ref|ZP_08094781.1| ribonuclease 3 [Planococcus donghaensis MPA1U2]
gi|323396685|gb|EGA89504.1| ribonuclease 3 [Planococcus donghaensis MPA1U2]
Length = 251
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 59/95 (62%), Gaps = 3/95 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTY-NANRIT--TSYQRLEFLGDAIIDFLVTAYLYENF 171
QL+K +N TF+ + L QA +H +Y N +R T +RLEFLGDA+++ V+ YLY +
Sbjct: 25 QLQKELNITFKKPTLLYQAFTHSSYVNEHRRKQFTDNERLEFLGDAVLELSVSHYLYMKY 84
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+S GE++ +R+A+V + +A L K++L
Sbjct: 85 PEMSEGELTKLRAAIVCEPSLVLFANELGFGKYIL 119
>gi|297539125|ref|YP_003674894.1| ribonuclease III [Methylotenera versatilis 301]
gi|297258472|gb|ADI30317.1| ribonuclease III [Methylotenera versatilis 301]
Length = 231
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
L KR++Y F DK+ L QAL+H +Y + + +RLE+LGD ++F++ LY+ F L+
Sbjct: 6 LSKRLSYKFVDKNLLTQALTHRSYASQ----NNERLEYLGDGALNFIIANQLYQRFPSLA 61
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G++S +R+ +V T + A LD+ L
Sbjct: 62 EGDLSRLRAQLVKEATISEIAFSLDIGDAL 91
>gi|125586950|gb|EAZ27614.1| hypothetical protein OsJ_11558 [Oryza sativa Japonica Group]
Length = 258
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 46/70 (65%)
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDAI+D L T Y Y + +P ++D+RSA VNN +A AV+ L+KH+LH S
Sbjct: 46 RLEFLGDAILDHLFTEYYYSKYPDCTPELLTDLRSASVNNNCYAHAAVKSGLNKHILHSS 105
Query: 210 PRLYENVTRF 219
L+ ++ +
Sbjct: 106 SELHRKMSYY 115
>gi|357055497|ref|ZP_09116565.1| ribonuclease III [Clostridium clostridioforme 2_1_49FAA]
gi|355382616|gb|EHG29713.1| ribonuclease III [Clostridium clostridioforme 2_1_49FAA]
Length = 234
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 63/94 (67%), Gaps = 3/94 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTY-NANRITTSY--QRLEFLGDAIIDFLVTAYLYENF 171
+LE+RI+Y F++K+ QAL+H +Y N +R+ S +RLEFLGDA+++ + + +LY +
Sbjct: 7 ELEERISYEFKNKNLFTQALTHSSYANEHRLDHSRCNERLEFLGDAVLEIVTSEFLYRKY 66
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
L G+++ IR+++V T A A ++L ++L
Sbjct: 67 ETLPEGDLTKIRASIVCEPTLAYCAGDIELGQYL 100
>gi|422590357|ref|ZP_16665013.1| ribonuclease III [Pseudomonas syringae pv. morsprunorum str.
M302280]
gi|330877435|gb|EGH11584.1| ribonuclease III [Pseudomonas syringae pv. morsprunorum str.
M302280]
Length = 229
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
++LE++++YTF+D+ ++ AL+H ++ + +RLEFLGDAI++F+ L+E F
Sbjct: 6 SRLERQLDYTFKDQELMILALTHRSFAGR----NNERLEFLGDAILNFVAGEALFERFPQ 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A DL ++L S L
Sbjct: 62 AREGQLSRLRARLVKGETLALLARGFDLGEYLRLGSGEL 100
>gi|346642759|ref|YP_258202.2| ribonuclease III [Pseudomonas protegens Pf-5]
gi|90101636|sp|Q4KHT1.2|RNC_PSEF5 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|341579898|gb|AAY90358.2| ribonuclease III [Pseudomonas protegens Pf-5]
Length = 229
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
++LE+++ Y+F+D+ +L AL+H ++ + +RLEFLGDAI++F+ L+E F
Sbjct: 6 SRLERQLGYSFKDQELMLLALTHRSFAGR----NNERLEFLGDAILNFVAGEALFERFPQ 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A DL ++L S L
Sbjct: 62 AREGQLSRLRARLVKGETLAVLARGFDLGEYLRLGSGEL 100
>gi|358451275|ref|ZP_09161709.1| ribonuclease III [Marinobacter manganoxydans MnI7-9]
gi|385330525|ref|YP_005884476.1| ribonuclease 3 [Marinobacter adhaerens HP15]
gi|311693675|gb|ADP96548.1| ribonuclease 3 [Marinobacter adhaerens HP15]
gi|357224508|gb|EHJ03039.1| ribonuclease III [Marinobacter manganoxydans MnI7-9]
Length = 229
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 4/95 (4%)
Query: 111 PECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYEN 170
P+ QL++RI Y F+ LL AL+H +Y + +RLEFLGD+I++ ++ YL+ +
Sbjct: 5 PDLDQLQRRIGYQFKSPERLLLALTHRSYG----NQNNERLEFLGDSIVNMVIAEYLFLH 60
Query: 171 FSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
F G++S +R+ MV VT A L +L
Sbjct: 61 FEKAREGQLSRLRARMVKGVTLAEIGREFQLGTYL 95
>gi|409393574|ref|ZP_11244881.1| ribonuclease III [Pseudomonas sp. Chol1]
gi|409395231|ref|ZP_11246326.1| ribonuclease III [Pseudomonas sp. Chol1]
gi|409120122|gb|EKM96485.1| ribonuclease III [Pseudomonas sp. Chol1]
gi|409121907|gb|EKM97968.1| ribonuclease III [Pseudomonas sp. Chol1]
Length = 229
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
+LE+++ Y F+D+ +L AL+H +Y + +RLEFLGDAI++F+ L+ +F+
Sbjct: 6 ARLERKLGYQFRDQELMLLALTHRSYAGR----NNERLEFLGDAILNFIAGEALFHHFTQ 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A +L HL S L
Sbjct: 62 AREGQLSRLRARLVKGETLAVLARGFELGDHLRLGSGEL 100
>gi|399519923|ref|ZP_10760714.1| ribonuclease III [Pseudomonas pseudoalcaligenes CECT 5344]
gi|399112320|emb|CCH37273.1| ribonuclease III [Pseudomonas pseudoalcaligenes CECT 5344]
Length = 229
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 60/102 (58%), Gaps = 4/102 (3%)
Query: 111 PECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYEN 170
P+ ++LE+++ Y F+D+ ++ AL+H ++ + +RLEFLGDAI++F+ L+E
Sbjct: 3 PDLSRLERKLGYRFKDQDLMVLALTHRSFAGR----NNERLEFLGDAILNFVAGEALFER 58
Query: 171 FSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
F G++S +R+ +V T A A +L ++L S L
Sbjct: 59 FPQAREGQLSRLRARLVKGETLAVLARGFELGEYLRLGSGEL 100
>gi|27904735|ref|NP_777861.1| ribonuclease III [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
gi|29427422|sp|P59476.1|RNC_BUCBP RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|27904132|gb|AAO26966.1| ribonuclease III [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 226
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 55/91 (60%), Gaps = 4/91 (4%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+L+K + YTF K L+QAL+H + N+ +RLEFLGD+I+ F++ LY F H+
Sbjct: 8 KLQKILGYTFIKKDLLIQALTHRSANSKH----NERLEFLGDSILSFVIANALYHCFPHV 63
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
+ G++S +R+ +V T A A DL +L
Sbjct: 64 NEGDMSRMRATLVRGHTLAKIAYEFDLGDYL 94
>gi|429332986|ref|ZP_19213694.1| ribonuclease III [Pseudomonas putida CSV86]
gi|428762332|gb|EKX84538.1| ribonuclease III [Pseudomonas putida CSV86]
Length = 229
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 59/102 (57%), Gaps = 4/102 (3%)
Query: 111 PECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYEN 170
P ++LE+++ Y+F+++ +L AL+H +Y + +RLEFLGDAI++F+ L+E
Sbjct: 3 PSLSRLERKLGYSFKNQELMLLALTHRSYAGR----NNERLEFLGDAILNFVAGEALFER 58
Query: 171 FSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
F G++S +R+ +V T A A +L +L S L
Sbjct: 59 FPQAREGQLSRLRARLVKGETLALLARGFELGDYLRLGSGEL 100
>gi|28871359|ref|NP_793978.1| ribonuclease III [Pseudomonas syringae pv. tomato str. DC3000]
gi|213971119|ref|ZP_03399238.1| ribonuclease III [Pseudomonas syringae pv. tomato T1]
gi|237798713|ref|ZP_04587174.1| ribonuclease III [Pseudomonas syringae pv. oryzae str. 1_6]
gi|237806146|ref|ZP_04592850.1| ribonuclease III [Pseudomonas syringae pv. oryzae str. 1_6]
gi|301381864|ref|ZP_07230282.1| ribonuclease III [Pseudomonas syringae pv. tomato Max13]
gi|302063246|ref|ZP_07254787.1| ribonuclease III [Pseudomonas syringae pv. tomato K40]
gi|302132832|ref|ZP_07258822.1| ribonuclease III [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|422299810|ref|ZP_16387360.1| ribonuclease III [Pseudomonas avellanae BPIC 631]
gi|422657043|ref|ZP_16719486.1| ribonuclease III [Pseudomonas syringae pv. lachrymans str. M302278]
gi|37999381|sp|Q87XG1.1|RNC_PSESM RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|28854610|gb|AAO57673.1| ribonuclease III [Pseudomonas syringae pv. tomato str. DC3000]
gi|213924108|gb|EEB57684.1| ribonuclease III [Pseudomonas syringae pv. tomato T1]
gi|331015601|gb|EGH95657.1| ribonuclease III [Pseudomonas syringae pv. lachrymans str. M302278]
gi|331021566|gb|EGI01623.1| ribonuclease III [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331027259|gb|EGI07314.1| ribonuclease III [Pseudomonas syringae pv. oryzae str. 1_6]
gi|407988176|gb|EKG30788.1| ribonuclease III [Pseudomonas avellanae BPIC 631]
Length = 229
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
++LE+++ YTF+D+ ++ AL+H ++ + +RLEFLGDAI++F+ L+E F
Sbjct: 6 SRLERQLGYTFKDQELMILALTHRSFAGR----NNERLEFLGDAILNFVAGEALFERFPQ 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A DL ++L S L
Sbjct: 62 AREGQLSRLRARLVKGETLALLARGFDLGEYLRLGSGEL 100
>gi|241758554|ref|ZP_04756671.1| ribonuclease III [Neisseria flavescens SK114]
gi|241321297|gb|EER57457.1| ribonuclease III [Neisseria flavescens SK114]
Length = 239
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
++KR+ Y F++ L QAL+H +YNA +R EF+GD+I+++ V L++ F LS
Sbjct: 14 IQKRLGYEFRNMELLQQALTHRSYNAKH----NERFEFVGDSILNYSVARMLFDAFPKLS 69
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDL 201
GE+S +R+A+VN A A+ +++
Sbjct: 70 EGELSRMRAALVNEGVLAEIALEMNV 95
>gi|87311240|ref|ZP_01093362.1| ribonuclease III [Blastopirellula marina DSM 3645]
gi|87285980|gb|EAQ77892.1| ribonuclease III [Blastopirellula marina DSM 3645]
Length = 243
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
++ E RI Y FQ+KS L AL+H + ++R+ ++ +RLEFLGDAI+ +V L+ +F H
Sbjct: 16 SRCEVRIGYEFQEKSLLKSALTHASGASHRLESN-ERLEFLGDAILGRVVCEALFHSFPH 74
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G+++ I+S +V+ +T A + L L + L+
Sbjct: 75 FLEGDLTRIKSVVVSRLTCAKLSRVLGLEEFLI 107
>gi|388543300|ref|ZP_10146591.1| ribonuclease III [Pseudomonas sp. M47T1]
gi|388278612|gb|EIK98183.1| ribonuclease III [Pseudomonas sp. M47T1]
Length = 229
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
++LE+++ YTF+D+ ++ AL+H ++ + +RLEFLGDAI++F+ L+E F
Sbjct: 6 SRLERQLGYTFKDQELMVLALTHRSFAGR----NNERLEFLGDAILNFVAGESLFERFPQ 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A DL ++L S L
Sbjct: 62 AREGQLSRLRARLVKGETLAVLARGFDLGEYLRLGSGEL 100
>gi|409417807|ref|ZP_11257831.1| ribonuclease III [Pseudomonas sp. HYS]
Length = 229
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
++LE+++ YTF+++ +L AL+H ++ + +RLEFLGDAI++F+ L+E F
Sbjct: 6 SRLERQLGYTFKNQELMLLALTHRSFAGR----NNERLEFLGDAILNFVAGEALFERFPQ 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A DL ++L S L
Sbjct: 62 AREGQLSRLRARLVKGETLAVLARGFDLGEYLRLGSGEL 100
>gi|319639176|ref|ZP_07993927.1| ribonuclease 3 [Neisseria mucosa C102]
gi|317399360|gb|EFV80030.1| ribonuclease 3 [Neisseria mucosa C102]
Length = 239
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
++KR+ Y F++ L QAL+H +YNA +R EF+GD+I+++ V L++ F LS
Sbjct: 14 IQKRLGYEFRNMELLQQALTHRSYNAKH----NERFEFVGDSILNYSVARMLFDAFPKLS 69
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDL 201
GE+S +R+A+VN A A+ +++
Sbjct: 70 EGELSRMRAALVNEGVLAEIALEMNV 95
>gi|424069074|ref|ZP_17806522.1| ribonuclease III [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
gi|424073514|ref|ZP_17810930.1| ribonuclease III [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|407995629|gb|EKG36150.1| ribonuclease III [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
gi|407995922|gb|EKG36425.1| ribonuclease III [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
Length = 225
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
++LE+++ YTF+D+ ++ AL+H ++ + +RLEFLGDAI++F+ L+E F
Sbjct: 2 SRLERQLGYTFKDQELMVLALTHRSFAGR----NNERLEFLGDAILNFVAGEALFERFPQ 57
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A DL ++L S L
Sbjct: 58 AREGQLSRLRARLVKGETLALLARGFDLGEYLRLGSGEL 96
>gi|90416440|ref|ZP_01224371.1| ribonuclease III [gamma proteobacterium HTCC2207]
gi|90331639|gb|EAS46867.1| ribonuclease III [gamma proteobacterium HTCC2207]
Length = 225
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
QL+ R+ Y F D L ALSH + +N + +RLEFLGDA++ ++++L++ F
Sbjct: 7 QLQDRLQYQFSDPQLLTLALSHRSCGSN----NNERLEFLGDAVLGMAISSFLFQRFPEA 62
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G++S IRS +V + A A +LDL LL
Sbjct: 63 REGDLSRIRSQVVRAESLAEIARKLDLGPELL 94
>gi|427407296|ref|ZP_18897501.1| ribonuclease III [Selenomonas sp. F0473]
gi|425707386|gb|EKU70431.1| ribonuclease III [Selenomonas sp. F0473]
Length = 251
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 62/107 (57%), Gaps = 3/107 (2%)
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY--NANRITTSYQRLEFLGDAI 158
A G+ P R +L R+ F D S L +AL+H +Y + ++ +RLE+LGDA+
Sbjct: 15 AHGMTPERR-KALERLSVRLGIRFADISLLDEALTHSSYANESRKLIPHNERLEYLGDAV 73
Query: 159 IDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
++ + YLYE F + GE++ +R+++V + T A A RLDL +L
Sbjct: 74 LELASSTYLYECFPACTEGELTKMRASLVQSETLARLARRLDLGAYL 120
>gi|336430743|ref|ZP_08610682.1| ribonuclease III [Lachnospiraceae bacterium 3_1_57FAA_CT1]
gi|336016836|gb|EGN46612.1| ribonuclease III [Lachnospiraceae bacterium 3_1_57FAA_CT1]
Length = 253
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTY-NANRITT--SYQRLEFLGDAIIDFLVTAYLYENFS 172
LEK+I Y F+DK L QAL+H ++ N +I Y+RLEFLGDA+++ + + +L+
Sbjct: 10 LEKKIGYVFRDKMLLRQALTHSSFANEQKINKLEDYERLEFLGDAVLELVSSEFLFSENP 69
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ G+++ +RS+MV A A L+L +++L
Sbjct: 70 EMPEGKLTKLRSSMVCEPALAYCARDLELGQYML 103
>gi|291542641|emb|CBL15751.1| RNAse III [Ruminococcus bromii L2-63]
Length = 225
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 62/95 (65%), Gaps = 5/95 (5%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSY----QRLEFLGDAIIDFLVTAYLYENF 171
L+KRI YTF++ L +AL+H +Y AN + +RLEFLGDA++ +V+ Y++++
Sbjct: 4 LQKRIGYTFKNTDLLTEALTHSSY-ANEHKAKHIKYNERLEFLGDAVLSIVVSDYIFKHC 62
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
L GE++ +R+++V T +A +++L K+L+
Sbjct: 63 PELPEGELTKLRASLVCEKTLFEFAKQIELGKYLV 97
>gi|400595165|gb|EJP62972.1| RNase3 domain-containing protein [Beauveria bassiana ARSEF 2860]
Length = 1465
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 49/170 (28%), Positives = 79/170 (46%), Gaps = 6/170 (3%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEAL-YGPHPSAVRCP 98
+LGDK +ADV E++ G S +G + + D H+ + + +A P
Sbjct: 1105 QLGDKTIADVCEAIIGAAYMSGVQQGGNMDEAVKAVTKMVNNDNHKMTSFSDYYAAFSVP 1164
Query: 99 EQARGLDPLRYIPECT--QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGD 156
A L P T ++ I Y F+ L A +H +Y A I SYQ LEFLGD
Sbjct: 1165 --AWHLSPGSVSVRATVDRVAAIIGYRFRSPLLLRSAFTHASYKAEEIP-SYQTLEFLGD 1221
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
A++D ++ +L+ H P +++ + ++ +N V L LH+ LL
Sbjct: 1222 ALLDMVIVDHLFRTRPHAGPQALTESKMSVCSNQFLGCLCVELGLHRELL 1271
>gi|284799722|ref|ZP_05984688.2| ribonuclease III [Neisseria subflava NJ9703]
gi|284797336|gb|EFC52683.1| ribonuclease III [Neisseria subflava NJ9703]
Length = 296
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
++KR+ Y F++ L QAL+H +YNA +R EF+GD+I+++ V L++ F LS
Sbjct: 14 IQKRLGYEFRNMELLQQALTHRSYNAKH----NERFEFVGDSILNYSVARMLFDAFPKLS 69
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDL 201
GE+S +R+A+VN A A+ +++
Sbjct: 70 EGELSRMRAALVNEGVLAEIALEMNV 95
>gi|225075386|ref|ZP_03718585.1| hypothetical protein NEIFLAOT_00391 [Neisseria flavescens
NRL30031/H210]
gi|224953204|gb|EEG34413.1| hypothetical protein NEIFLAOT_00391 [Neisseria flavescens
NRL30031/H210]
Length = 239
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
++KR+ Y F++ L QAL+H +YNA +R EF+GD+I+++ V L++ F LS
Sbjct: 14 IQKRLGYEFRNMELLQQALTHRSYNAKH----NERFEFVGDSILNYSVARMLFDAFPKLS 69
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDL 201
GE+S +R+A+VN A A+ +++
Sbjct: 70 EGELSRMRAALVNEGVLAEIALEMNV 95
>gi|254481213|ref|ZP_05094458.1| ribonuclease III [marine gamma proteobacterium HTCC2148]
gi|214038376|gb|EEB79038.1| ribonuclease III [marine gamma proteobacterium HTCC2148]
Length = 232
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 54/92 (58%), Gaps = 4/92 (4%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+L++ + Y F DKS L AL+H + + +RLEFLGD+I++ ++ LY F
Sbjct: 10 RLQRALGYQFADKSLLQLALTHRSVGGR----NNERLEFLGDSIVNHIIAEALYRQFPDA 65
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G++S +R+++V T A A LDL +HLL
Sbjct: 66 REGDMSRMRASLVKGDTLAEVARELDLGEHLL 97
>gi|392566224|gb|EIW59400.1| P-loop containing nucleoside triphosphate hydrolase protein [Trametes
versicolor FP-101664 SS1]
Length = 1508
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 79/161 (49%), Gaps = 24/161 (14%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNI------LPQSKIDVHEALYGPHPS 93
+L K++ADVVESL G G + A+ + + L + ++HE
Sbjct: 1139 ELSTKMLADVVESLIGAAYEHGGFDLAIDCVARFGLGISWKKLSERIKEMHEV-----ED 1193
Query: 94 AVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEF 153
V P+Q +E+ +NY F+ ++FL+QAL+H +Y + S +RLEF
Sbjct: 1194 LVDLPDQ------------LALVEQMLNYQFKRRTFLVQALTHASYQGDSAVMSLERLEF 1241
Query: 154 LGDAIIDFLVTAYLYE-NFSHLSPGEISDIRSAMVNNVTFA 193
LGD+ +D +VT YLY + SPG + + A VN+ A
Sbjct: 1242 LGDSALDMVVTDYLYHAEGKNYSPGYMHIKKEAAVNSHILA 1282
Score = 44.7 bits (104), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 56/125 (44%), Gaps = 10/125 (8%)
Query: 92 PSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRL 151
PS +R A +D LR T L + + LL A++ P + YQRL
Sbjct: 982 PSILRWLANALTVDALR-----TNLFRTTSVAGVPLPLLLTAITAPIAQE---LSHYQRL 1033
Query: 152 EFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS-- 209
E LGD ++ F + LY F G +S + V N + A AV+ L++ ++ D
Sbjct: 1034 ETLGDTVLKFTSSNQLYAEFPLWHEGYLSRKKDHAVANSSLAKEAVKKGLYQWIIRDRFV 1093
Query: 210 PRLYE 214
PR ++
Sbjct: 1094 PRKWK 1098
>gi|325275444|ref|ZP_08141375.1| ribonuclease III [Pseudomonas sp. TJI-51]
gi|324099420|gb|EGB97335.1| ribonuclease III [Pseudomonas sp. TJI-51]
Length = 229
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
+LE+++ YTF+++ +L AL+H +Y A R + +RLEFLGDAI++F+ L+E F
Sbjct: 6 ARLERKLGYTFKNQDQMLLALTHRSY-AGR---NNERLEFLGDAILNFVAGEALFERFPQ 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A DL ++L S L
Sbjct: 62 AREGQLSRLRARLVKGETLARLARGFDLGEYLRLGSGEL 100
>gi|291459099|ref|ZP_06598489.1| ribonuclease III [Oribacterium sp. oral taxon 078 str. F0262]
gi|291418353|gb|EFE92072.1| ribonuclease III [Oribacterium sp. oral taxon 078 str. F0262]
Length = 234
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 58/94 (61%), Gaps = 3/94 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYN---ANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
LE+++ Y+F+D+ LL AL+HP+Y+ + S QRLEFLGDA+++ + +LY
Sbjct: 7 LEEKLAYSFRDRELLLHALTHPSYSNEQGDPKEASNQRLEFLGDAVLELAASDFLYHRVP 66
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ G ++ +R+A+V T A A +L L +L+
Sbjct: 67 VIQEGVMTKLRAALVCEPTLAEAARKLSLGDYLV 100
>gi|167035367|ref|YP_001670598.1| ribonuclease III [Pseudomonas putida GB-1]
gi|189043333|sp|B0KV27.1|RNC_PSEPG RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|166861855|gb|ABZ00263.1| Ribonuclease III [Pseudomonas putida GB-1]
Length = 229
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
+LE+++ YTF+++ +L AL+H +Y + +RLEFLGDAI++F+ L+E F
Sbjct: 6 ARLERKLGYTFKNQDQMLLALTHRSYAGR----NNERLEFLGDAILNFVAGEALFERFPQ 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A DL ++L S L
Sbjct: 62 AREGQLSRLRARLVKGETLARLARGFDLGEYLRLGSGEL 100
>gi|119489560|ref|ZP_01622320.1| Ribonuclease III [Lyngbya sp. PCC 8106]
gi|119454472|gb|EAW35620.1| Ribonuclease III [Lyngbya sp. PCC 8106]
Length = 395
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Query: 124 FQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS-PGEI 179
FQD L +AL+H TY + + ++LEFLGD++++FL YLYE +SH GE+
Sbjct: 175 FQDARLLQRALTHRTYVFEHPTKTEGDNEQLEFLGDSVLNFLAGDYLYEQYSHRRDEGEL 234
Query: 180 SDIRSAMVNNVTFASYAVRLDLHKHL 205
+ RS+ V+N FA +AV+L+L + +
Sbjct: 235 TRRRSSFVDNSQFAQFAVKLNLGEWM 260
>gi|95930677|ref|ZP_01313411.1| Ribonuclease III [Desulfuromonas acetoxidans DSM 684]
gi|95133329|gb|EAT14994.1| Ribonuclease III [Desulfuromonas acetoxidans DSM 684]
Length = 244
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 54/93 (58%), Gaps = 3/93 (3%)
Query: 112 ECTQLEKRINYTFQDKSFLLQALSHPTYNANRI---TTSYQRLEFLGDAIIDFLVTAYLY 168
E +Q E+R+ Y F D+ +L AL H +Y ++ +R EFLGDA++D ++ YL+
Sbjct: 12 ELSQFEERLGYRFTDRHYLQTALIHKSYANEQLRDPAACNERQEFLGDAVLDLVMADYLF 71
Query: 169 ENFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
+ L GE+S IRS +V+ A A RL+L
Sbjct: 72 CTYPQLPEGELSRIRSELVSARALAKVARRLNL 104
>gi|66047178|ref|YP_237019.1| ribonuclease III [Pseudomonas syringae pv. syringae B728a]
gi|257486563|ref|ZP_05640604.1| ribonuclease III [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|289628144|ref|ZP_06461098.1| ribonuclease III [Pseudomonas syringae pv. aesculi str. NCPPB 3681]
gi|289649890|ref|ZP_06481233.1| ribonuclease III [Pseudomonas syringae pv. aesculi str. 2250]
gi|289676656|ref|ZP_06497546.1| ribonuclease III [Pseudomonas syringae pv. syringae FF5]
gi|302186917|ref|ZP_07263590.1| ribonuclease III [Pseudomonas syringae pv. syringae 642]
gi|422585904|ref|ZP_16660960.1| ribonuclease III [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|422598759|ref|ZP_16673015.1| ribonuclease III [Pseudomonas syringae pv. lachrymans str. M301315]
gi|422618136|ref|ZP_16686835.1| ribonuclease III [Pseudomonas syringae pv. japonica str. M301072]
gi|422637660|ref|ZP_16701092.1| ribonuclease III [Pseudomonas syringae Cit 7]
gi|422675313|ref|ZP_16734658.1| ribonuclease III [Pseudomonas syringae pv. aceris str. M302273]
gi|422680701|ref|ZP_16738972.1| ribonuclease III [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|440722754|ref|ZP_20903129.1| ribonuclease III [Pseudomonas syringae BRIP34876]
gi|440725674|ref|ZP_20905938.1| ribonuclease III [Pseudomonas syringae BRIP34881]
gi|440742167|ref|ZP_20921496.1| ribonuclease III [Pseudomonas syringae BRIP39023]
gi|443642588|ref|ZP_21126438.1| Ribonuclease III [Pseudomonas syringae pv. syringae B64]
gi|75500898|sp|Q4ZPE1.1|RNC_PSEU2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|63257885|gb|AAY38981.1| RNAse III [Pseudomonas syringae pv. syringae B728a]
gi|298156750|gb|EFH97841.1| Ribonuclease III [Pseudomonas savastanoi pv. savastanoi NCPPB 3335]
gi|330871241|gb|EGH05950.1| ribonuclease III [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|330898515|gb|EGH29934.1| ribonuclease III [Pseudomonas syringae pv. japonica str. M301072]
gi|330950056|gb|EGH50316.1| ribonuclease III [Pseudomonas syringae Cit 7]
gi|330973032|gb|EGH73098.1| ribonuclease III [Pseudomonas syringae pv. aceris str. M302273]
gi|330989032|gb|EGH87135.1| ribonuclease III [Pseudomonas syringae pv. lachrymans str. M301315]
gi|331010046|gb|EGH90102.1| ribonuclease III [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|440360810|gb|ELP98066.1| ribonuclease III [Pseudomonas syringae BRIP34876]
gi|440368469|gb|ELQ05505.1| ribonuclease III [Pseudomonas syringae BRIP34881]
gi|440377990|gb|ELQ14624.1| ribonuclease III [Pseudomonas syringae BRIP39023]
gi|443282605|gb|ELS41610.1| Ribonuclease III [Pseudomonas syringae pv. syringae B64]
Length = 229
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
++LE+++ YTF+D+ ++ AL+H ++ + +RLEFLGDAI++F+ L+E F
Sbjct: 6 SRLERQLGYTFKDQELMVLALTHRSFAGR----NNERLEFLGDAILNFVAGEALFERFPQ 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A DL ++L S L
Sbjct: 62 AREGQLSRLRARLVKGETLALLARGFDLGEYLRLGSGEL 100
>gi|313124070|ref|YP_004034329.1| ribonuclease iii [Lactobacillus delbrueckii subsp. bulgaricus ND02]
gi|312280633|gb|ADQ61352.1| Ribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus ND02]
Length = 231
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 56/93 (60%), Gaps = 3/93 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
L+++ F+D L +A +H +Y N + +Y++LEFLGDA+++F V+ YLY +F
Sbjct: 10 LDEKYGIRFKDVRLLEEAFTHSSYVNENPGKTLGNYEKLEFLGDAVLEFTVSDYLYRHFQ 69
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
HL+ GE++ +RS +V F+ A+ K +
Sbjct: 70 HLNEGELTRLRSNIVRTEGFSKVALDCGFKKEI 102
>gi|399047096|ref|ZP_10739228.1| ribonuclease III [Brevibacillus sp. CF112]
gi|398054929|gb|EJL47027.1| ribonuclease III [Brevibacillus sp. CF112]
Length = 233
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 58/92 (63%), Gaps = 5/92 (5%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTY----NANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
QL+++I + F D+S L QA +H +Y RI+ + +RLEFLGDA+++ V+ +LY+
Sbjct: 9 AQLQEKIGFRFHDESVLRQAFTHSSYVNEQRGKRISDN-ERLEFLGDAVLELTVSQFLYK 67
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
F +S GE++ +R+A+V + +A L+
Sbjct: 68 TFPKMSEGEMTKLRAAIVCEPSLVKFAELLNF 99
>gi|212537171|ref|XP_002148741.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
gi|210068483|gb|EEA22574.1| RNA helicase/RNAse III, putative [Talaromyces marneffei ATCC 18224]
Length = 1431
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 77/153 (50%), Gaps = 12/153 (7%)
Query: 37 DRIKLGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVR 96
++ +L K +ADVVESL G G E L+A +KI + E + VR
Sbjct: 1060 EKRELSTKTLADVVESLLGAAFLDGGYEK----LEAC-----AKIVLPERAWSSIGDDVR 1110
Query: 97 CP-EQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLG 155
E A D P+ Q+E+ + Y F S L +AL+HP+ N T YQRLEFLG
Sbjct: 1111 TLYEAALDSDQAAMHPKLGQMEEMLGYKFNKPSILFEALTHPSSNDGAPT--YQRLEFLG 1168
Query: 156 DAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
D+++D V + + LS E+ +R+A+VN
Sbjct: 1169 DSLLDHFVVQEFFNHPEKLSHQEMHLMRTAVVN 1201
>gi|242221926|ref|XP_002476701.1| predicted protein [Postia placenta Mad-698-R]
gi|220724029|gb|EED78105.1| predicted protein [Postia placenta Mad-698-R]
Length = 232
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 68/140 (48%), Gaps = 31/140 (22%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAM-------LFLQALNILPQS----KIDVHEALY 88
+L KV+ADVVESL G G + A+ L L + +PQ + E Y
Sbjct: 113 ELSTKVLADVVESLIGAAYEHGGFDLAVNCISIFGLGLPSWQTIPQHIDNIMTKIEELDY 172
Query: 89 GPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSY 148
P P+ + +E + Y F K+ L+QAL+H +Y+ + T SY
Sbjct: 173 PP--------------------PQLSLVETMLGYEFTHKALLVQALTHASYHGDLTTMSY 212
Query: 149 QRLEFLGDAIIDFLVTAYLY 168
+RLEFLGD+ +D +VT +LY
Sbjct: 213 ERLEFLGDSALDMVVTDWLY 232
Score = 39.7 bits (91), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 25/96 (26%), Positives = 47/96 (48%), Gaps = 10/96 (10%)
Query: 147 SYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+YQRLE LGD ++ ++ + L+ ++ G ++ + V+NV A A+ L++ ++
Sbjct: 12 NYQRLETLGDTVLKYITSIKLFADYPLWHEGYLARRKDHAVSNVQLAKCAISKGLYQWII 71
Query: 207 HDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEG 242
D RF ++ R H +S E+ EG
Sbjct: 72 RD---------RFVP-RKWRPHYMSGPEDIGSRTEG 97
>gi|410658788|ref|YP_006911159.1| Ribonuclease III [Dehalobacter sp. DCA]
gi|410661777|ref|YP_006914148.1| Ribonuclease III [Dehalobacter sp. CF]
gi|409021143|gb|AFV03174.1| Ribonuclease III [Dehalobacter sp. DCA]
gi|409024133|gb|AFV06163.1| Ribonuclease III [Dehalobacter sp. CF]
Length = 248
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 51/81 (62%), Gaps = 3/81 (3%)
Query: 129 FLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSA 185
+ AL+HP++ N N + QRLEFLGDA++DF++ YLY+N+ GE++ +R+A
Sbjct: 41 LIFTALTHPSFTFENPNSGLENNQRLEFLGDAVLDFIIGEYLYQNYPDKPEGELTKMRAA 100
Query: 186 MVNNVTFASYAVRLDLHKHLL 206
+VN T A A ++L + L
Sbjct: 101 VVNETTLARKARSINLGQALF 121
>gi|297804712|ref|XP_002870240.1| ribonuclease III family protein [Arabidopsis lyrata subsp. lyrata]
gi|297316076|gb|EFH46499.1| ribonuclease III family protein [Arabidopsis lyrata subsp. lyrata]
Length = 214
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 62/113 (54%), Gaps = 1/113 (0%)
Query: 112 ECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
E LEK +NY F+DK L+QA + +Y ++ SY+ LE LGD+I++ + + +
Sbjct: 29 EIESLEKILNYKFKDKRLLVQAFTDASYVDDK-CDSYEILELLGDSILNMSIIDEFIKLY 87
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQE 224
SPG ++ +R+ V+ A AV+ L+++L H P L E + F + E
Sbjct: 88 PKESPGPLTKLRAVNVDTEKLARVAVKHQLYRYLRHKKPLLEEQILEFVEAME 140
>gi|197303071|ref|ZP_03168119.1| hypothetical protein RUMLAC_01798 [Ruminococcus lactaris ATCC
29176]
gi|197297926|gb|EDY32478.1| ribonuclease III [Ruminococcus lactaris ATCC 29176]
Length = 229
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSY---QRLEFLGDAIIDFLVTAYLYENF 171
+LEK+I YTF++ L +A+ H +Y + Y +RLEFLGDA+++ + + YL+
Sbjct: 7 ELEKKIGYTFENHKLLERAMMHSSYTNEKHLEKYRCNERLEFLGDAVLELISSEYLFGEL 66
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+S GE++ R++MV + A A +DL +LL
Sbjct: 67 PRVSEGELTKTRASMVCEPSLAMCARDIDLGSYLL 101
>gi|160892686|ref|ZP_02073476.1| hypothetical protein CLOL250_00216 [Clostridium sp. L2-50]
gi|156865727|gb|EDO59158.1| ribonuclease III [Clostridium sp. L2-50]
Length = 230
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 59/94 (62%), Gaps = 3/94 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTY-NANRITT--SYQRLEFLGDAIIDFLVTAYLYENFS 172
+E I YTF+D L+ AL+H +Y N +I SY+R EFLGDAI++F+V+ YLY+N+
Sbjct: 9 IEDIIGYTFRDLDLLVTALTHKSYANERKINKVESYERSEFLGDAILEFVVSEYLYQNYP 68
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G+++ +R+++V T + + L ++L
Sbjct: 69 EYPEGKLTKLRASLVCEFTLSQISKELKFGHYVL 102
>gi|164688568|ref|ZP_02212596.1| hypothetical protein CLOBAR_02213 [Clostridium bartlettii DSM
16795]
gi|164602981|gb|EDQ96446.1| ribonuclease III [Clostridium bartlettii DSM 16795]
Length = 233
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 61/92 (66%), Gaps = 1/92 (1%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
E++INY F++K ++L+AL+H +Y N N+ +RLEFLGD+++ +++ YL++ + L
Sbjct: 14 FEQKINYEFKNKEYILEALTHSSYSNENKNYPFNERLEFLGDSVLSIVISDYLFKKETKL 73
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
GE++ IR+ +V + + + + L K++L
Sbjct: 74 PEGELTKIRANIVCEESLSEVSKNIHLGKYML 105
>gi|366166773|ref|ZP_09466528.1| ribonuclease III [Acetivibrio cellulolyticus CD2]
Length = 234
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 60/95 (63%), Gaps = 5/95 (5%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITT----SYQRLEFLGDAIIDFLVTAYLYENF 171
EK I Y F+DK L+ AL+H +Y AN + S +RLEFLGD+++ +++ +Y+N+
Sbjct: 13 FEKIIKYEFKDKDNLVLALTHSSY-ANEYKSEKLISNERLEFLGDSVLSVVISENIYKNY 71
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
SHLS GE++ R+ +V + + A L + ++LL
Sbjct: 72 SHLSEGEMTKFRANVVCEASLENCANNLSIGQYLL 106
>gi|336437038|ref|ZP_08616747.1| ribonuclease III [Lachnospiraceae bacterium 1_4_56FAA]
gi|336006172|gb|EGN36208.1| ribonuclease III [Lachnospiraceae bacterium 1_4_56FAA]
Length = 236
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 60/95 (63%), Gaps = 3/95 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTY-NANRITTS--YQRLEFLGDAIIDFLVTAYLYENF 171
+LE RI Y F+D S L +AL H ++ N R+ +RLEFLGDA+++ + + +L++ +
Sbjct: 14 ELEARIGYEFRDVSLLERALRHSSFTNEKRMPKQECNERLEFLGDAVLELVSSEFLFKEY 73
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+S GE++ R++MV + A A +DL K+LL
Sbjct: 74 PKVSEGELTKTRASMVCEPSLAFCARDIDLGKYLL 108
>gi|433546097|ref|ZP_20502435.1| ribonuclease III [Brevibacillus agri BAB-2500]
gi|432182713|gb|ELK40276.1| ribonuclease III [Brevibacillus agri BAB-2500]
Length = 228
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 58/92 (63%), Gaps = 5/92 (5%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTY----NANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
QL+++I + F D+S L QA +H +Y RI+ + +RLEFLGDA+++ V+ +LY+
Sbjct: 4 AQLQEKIGFRFHDESVLRQAFTHSSYVNEQRGKRISDN-ERLEFLGDAVLELTVSQFLYK 62
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
F +S GE++ +R+A+V + +A L+
Sbjct: 63 TFPKMSEGEMTKLRAAIVCEPSLVKFAELLNF 94
>gi|256544903|ref|ZP_05472274.1| ribonuclease III [Anaerococcus vaginalis ATCC 51170]
gi|256399402|gb|EEU13008.1| ribonuclease III [Anaerococcus vaginalis ATCC 51170]
Length = 238
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 63/100 (63%), Gaps = 3/100 (3%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAY 166
+ E +LE+ I YTF++K+ + AL+H +Y + + +S +RLEFLGD+I+D +V+
Sbjct: 8 LEEIEKLEESIGYTFKNKNLIDVALTHSSYINESKDENKSSNERLEFLGDSILDLIVSEE 67
Query: 167 LYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
LY+N G+++ IRS +V +F+ + + +L +LL
Sbjct: 68 LYKNHKTYPEGKLTKIRSRIVCTSSFSKASEKFNLSSYLL 107
>gi|425768112|gb|EKV06652.1| Dicer-like protein 2 [Penicillium digitatum Pd1]
gi|425769791|gb|EKV08273.1| Dicer-like protein 2 [Penicillium digitatum PHI26]
Length = 796
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 79/159 (49%), Gaps = 12/159 (7%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+ KV+ADVVESL G GI A L LP+ ID L+ S + P
Sbjct: 449 ISTKVLADVVESLIGAAYVDGGIRKAQACLH--RFLPE--ID----LFTTEISPLTLPPS 500
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
+ + +L I YTF+D + L +AL+H + + T SYQRLEFLGDA++D
Sbjct: 501 KGASSLINH----HRLAGLIGYTFKDPALLTEALTHASCEYDTSTQSYQRLEFLGDAVLD 556
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRL 199
+V A + + + G ++ ++ ++VN A + + L
Sbjct: 557 MVVMAVIAAHPVEMDQGPMTLLKHSVVNANLLAFFCMEL 595
Score = 45.4 bits (106), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 67/142 (47%), Gaps = 23/142 (16%)
Query: 80 KIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTF------QDKSFLLQA 133
K+ + L+G SA+ LD L E + + R+N T Q+ ++ A
Sbjct: 305 KLPAKQGLFGLFISAI--------LDRL----EASLVAHRLNDTILKGVGIQNIDHVITA 352
Query: 134 LSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFA 193
+S P A +T+YQR EF GD+++ F V+ L+ ++ G +S+ R +V N A
Sbjct: 353 ISAPIAQA---STNYQRFEFFGDSVLKFTVSCQLFFRNTNWHEGYLSESRDKLVQNTRLA 409
Query: 194 SYAVRLDLHKHLLHD--SPRLY 213
A+ + + +L +PR +
Sbjct: 410 HAALDIGIDCFILTSRFTPRKW 431
>gi|345886949|ref|ZP_08838163.1| ribonuclease III [Bilophila sp. 4_1_30]
gi|345037798|gb|EGW42307.1| ribonuclease III [Bilophila sp. 4_1_30]
Length = 233
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTY-NANRITTSY-QRLEFLGDAIIDFLVTAYLYENFSH 173
L+ RI Y F+D+S L+ A++H ++ N + ++ +RLEFLGDA+++ V+A L+ F
Sbjct: 6 LQDRIGYRFKDESLLVLAVTHSSWANEHSAGNAHNERLEFLGDAVLEIAVSAQLFARFPD 65
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDL 201
GE++ +RS++VN T A A +L L
Sbjct: 66 AREGELTRLRSSLVNEATLAVIARKLHL 93
>gi|326485005|gb|EGE09015.1| dicer-like protein 2 [Trichophyton equinum CBS 127.97]
Length = 1417
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 20/154 (12%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAM----LFLQALNILPQSKIDVHEALYGPHPS-A 94
+L K +ADVVESL G + G + LFL +N P + E L+ P
Sbjct: 1070 ELSTKTLADVVESLIGAAIIDGGENKVLRCLELFLPEINWQPSG--ERIEILFDSAPDFN 1127
Query: 95 VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFL 154
CP +++E I+Y+F K+ L +LSHP+ +R+T YQRLEFL
Sbjct: 1128 DDCPRDI-----------MSKIEPLIDYSFTKKALLATSLSHPSNLISRMT--YQRLEFL 1174
Query: 155 GDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
GD+I+D +VT L+ + ++ IR+A+VN
Sbjct: 1175 GDSILDNIVTRALFRCKKEIPHQDMHLIRTALVN 1208
>gi|322378529|ref|ZP_08052977.1| ribonuclease III [Helicobacter suis HS1]
gi|321149043|gb|EFX43495.1| ribonuclease III [Helicobacter suis HS1]
Length = 216
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 55/87 (63%), Gaps = 3/87 (3%)
Query: 120 INYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEI 179
+ Y F+D L QAL+H + A++ + +RLEFLGDA++D +V L+ F+ L G++
Sbjct: 1 MGYVFKDPLLLQQALTHRSTKAHK---NNERLEFLGDAVLDLVVAEILFTRFTDLQEGDL 57
Query: 180 SDIRSAMVNNVTFASYAVRLDLHKHLL 206
S +R+++VN F A+ L+L H+L
Sbjct: 58 SKMRASLVNEKAFFKLALSLNLQDHIL 84
>gi|410090612|ref|ZP_11287204.1| ribonuclease III [Pseudomonas viridiflava UASWS0038]
gi|409762119|gb|EKN47148.1| ribonuclease III [Pseudomonas viridiflava UASWS0038]
Length = 229
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
++LE+++ YTF+D+ ++ AL+H ++ + +RLEFLGDAI++F+ L+E F
Sbjct: 6 SRLERQLGYTFKDQELMVLALTHRSFAGR----NNERLEFLGDAILNFVAGEALFERFPQ 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A DL ++L S L
Sbjct: 62 AREGQLSRLRARLVKGETLALLARGFDLGEYLRLGSGEL 100
>gi|422644255|ref|ZP_16707393.1| ribonuclease III [Pseudomonas syringae pv. maculicola str. ES4326]
gi|330957807|gb|EGH58067.1| ribonuclease III [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 229
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
++LE+++ YTF+D+ ++ AL+H ++ + +RLEFLGDAI++F+ L+E F
Sbjct: 6 SRLERQLGYTFKDQELMVLALTHRSFAGR----NNERLEFLGDAILNFVAGEALFERFPQ 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A DL ++L S L
Sbjct: 62 AREGQLSRLRARLVKGETLALLARGFDLGEYLRLGSGEL 100
>gi|346327498|gb|EGX97094.1| RNA helicase/RNAse III, putative [Cordyceps militaris CM01]
Length = 1392
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/152 (31%), Positives = 80/152 (52%), Gaps = 18/152 (11%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAM----LFLQALNILPQSKIDVHEALYGPHPSAVR 96
L KV+ADVVE+L GV GI + +F+ + + S D E + PS
Sbjct: 1040 LSTKVLADVVEALIGVAYTVGGIPKTIQCLSIFITECDWMDPS--DCREEFFSCAPS--- 1094
Query: 97 CPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGD 156
G++ Y+ LE+ + Y+F KS LL+A +H +Y + S++RLEF+GD
Sbjct: 1095 -----HGVNS-SYL---HVLEELVGYSFTKKSLLLEATTHASYIGDIFGRSWERLEFIGD 1145
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
+I+D+++ L + L+ ++ I++AMVN
Sbjct: 1146 SILDYIIVNKLINHTPPLAHSQMHIIKTAMVN 1177
>gi|317484890|ref|ZP_07943780.1| ribonuclease III [Bilophila wadsworthia 3_1_6]
gi|316923872|gb|EFV45068.1| ribonuclease III [Bilophila wadsworthia 3_1_6]
Length = 233
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 57/88 (64%), Gaps = 2/88 (2%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTY-NANRITTSY-QRLEFLGDAIIDFLVTAYLYENFSH 173
L+ RI Y F+D+S L+ A++H ++ N + ++ +RLEFLGDA+++ V+A L+ F
Sbjct: 6 LQDRIGYRFKDESLLVLAVTHSSWANEHSAGNAHNERLEFLGDAVLEIAVSAQLFARFPD 65
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDL 201
GE++ +RS++VN T A A +L L
Sbjct: 66 AREGELTRLRSSLVNEATLAVIARKLHL 93
>gi|89898471|ref|YP_515581.1| ribonuclease III [Chlamydophila felis Fe/C-56]
gi|123483118|sp|Q253V2.1|RNC_CHLFF RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|89331843|dbj|BAE81436.1| ribonuclease III [Chlamydophila felis Fe/C-56]
Length = 237
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 57/94 (60%), Gaps = 2/94 (2%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTS--YQRLEFLGDAIIDFLVTAYLYENFS 172
++E ++ +TF L+ AL+HP+Y +T + +RLEFLGDA++ +VT +L+ F
Sbjct: 9 EVEAKLKFTFTQPQLLVTALTHPSYRNETVTITEDSERLEFLGDAVLCLIVTEHLFLLFP 68
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ G +S R+A++N V+ Y L L ++LL
Sbjct: 69 SMDEGTLSTARAALINAVSCCQYTDALGLGEYLL 102
>gi|71737399|ref|YP_276084.1| ribonuclease III [Pseudomonas syringae pv. phaseolicola 1448A]
gi|90101635|sp|Q48EV3.1|RNC_PSE14 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|71557952|gb|AAZ37163.1| ribonuclease III [Pseudomonas syringae pv. phaseolicola 1448A]
Length = 229
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
++LE+++ YTF+D+ ++ AL+H ++ + +RLEFLGDAI++F+ L+E F
Sbjct: 6 SRLERQLGYTFKDQELMVLALTHRSFAGR----NNERLEFLGDAILNFVAGEALFERFPQ 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A DL ++L S L
Sbjct: 62 AREGQLSRLRARLVKGETLALLARGFDLGEYLRLGSGEL 100
>gi|423093747|ref|ZP_17081543.1| ribonuclease III [Pseudomonas fluorescens Q2-87]
gi|397886951|gb|EJL03434.1| ribonuclease III [Pseudomonas fluorescens Q2-87]
Length = 229
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
++LE+++ YTF+D+ +L AL+H ++ + +RLEFLGDAI++F+ L+E F
Sbjct: 6 SRLERQLGYTFKDQELMLLALTHRSFAGR----NNERLEFLGDAILNFVAGEALFERFPL 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A DL +L S L
Sbjct: 62 AREGQLSRLRARLVKGETLAVLARGFDLGDYLRLGSGEL 100
>gi|407003127|gb|EKE19747.1| hypothetical protein ACD_8C00115G0008 [uncultured bacterium]
Length = 227
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/94 (40%), Positives = 57/94 (60%), Gaps = 4/94 (4%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTY-NANR--ITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
L K+I F + L QA++H +Y N NR +RLEFLGDA+++ ++T +LY N+
Sbjct: 5 LAKKIGVKFDNIELLRQAVTHRSYLNENRDLAIEHNERLEFLGDAVLELIITEHLYNNYK 64
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ GE++ RSA+VN AS + L + KHLL
Sbjct: 65 N-PEGELTSWRSALVNGEMLASVSQDLGVEKHLL 97
>gi|398952416|ref|ZP_10674764.1| ribonuclease III [Pseudomonas sp. GM33]
gi|426407871|ref|YP_007027970.1| ribonuclease III [Pseudomonas sp. UW4]
gi|398155170|gb|EJM43624.1| ribonuclease III [Pseudomonas sp. GM33]
gi|426266088|gb|AFY18165.1| ribonuclease III [Pseudomonas sp. UW4]
Length = 229
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
++LE+++ YTF+D+ ++ AL+H ++ + +RLEFLGDAI++F+ L+E F
Sbjct: 6 SRLERQLGYTFKDQELMVLALTHRSFAGR----NNERLEFLGDAILNFVAGEALFERFPL 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A DL ++L S L
Sbjct: 62 AREGQLSRLRARLVKGETLAVLARGFDLGEYLRLGSGEL 100
>gi|295109853|emb|CBL23806.1| RNAse III [Ruminococcus obeum A2-162]
Length = 223
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTY-NANRITT--SYQRLEFLGDAIIDFLVTAYLYENF 171
QLE+ I YTFQ+K L QAL+H +Y N ++ +RLEFLGDA+++ + + +LY F
Sbjct: 3 QLEQIIGYTFQNKKLLKQALTHSSYANEKKLGKLGCNERLEFLGDAVLELISSDFLYRKF 62
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
S + GE++ R+++V + A A L + LL
Sbjct: 63 SQIPEGELTKKRASLVCEPSLAYCAREFGLPEFLL 97
>gi|398874304|ref|ZP_10629515.1| ribonuclease III [Pseudomonas sp. GM74]
gi|398195373|gb|EJM82420.1| ribonuclease III [Pseudomonas sp. GM74]
Length = 229
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
++LE+++ YTF+D+ ++ AL+H ++ + +RLEFLGDAI++F+ L+E F
Sbjct: 6 SRLERQLGYTFKDQELMVLALTHRSFAGR----NNERLEFLGDAILNFVAGEALFERFPL 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A DL ++L S L
Sbjct: 62 AREGQLSRLRARLVKGETLAVLARGFDLGEYLRLGSGEL 100
>gi|225019245|ref|ZP_03708437.1| hypothetical protein CLOSTMETH_03198 [Clostridium methylpentosum
DSM 5476]
gi|224947876|gb|EEG29085.1| hypothetical protein CLOSTMETH_03198 [Clostridium methylpentosum
DSM 5476]
Length = 228
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 57/94 (60%), Gaps = 3/94 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYN---ANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
EK I YTF ++ L QAL+H ++ + +RLEFLGD+++ ++ +L+ NF
Sbjct: 4 FEKTIGYTFHNQKLLEQALTHSSFTNETGRHHHKNNERLEFLGDSVVSLIIANHLFVNFP 63
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ GE++ +R+++V + + A +A R+DL L+
Sbjct: 64 DMPEGELTKLRASLVCDRSLAEFAGRIDLGNQLI 97
>gi|56964064|ref|YP_175795.1| ribonuclease III [Bacillus clausii KSM-K16]
gi|81365967|sp|Q5WFM6.1|RNC_BACSK RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|56910307|dbj|BAD64834.1| ribonuclease III [Bacillus clausii KSM-K16]
Length = 260
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 59/91 (64%), Gaps = 3/91 (3%)
Query: 119 RINYTFQDKSFLLQALSHPTY-NANRITTSY--QRLEFLGDAIIDFLVTAYLYENFSHLS 175
R TF+++ L+QA +H +Y N RI +S +RLEFLGDA+++ V+ YL++ + ++S
Sbjct: 39 RTGLTFENRKLLIQAFTHSSYVNEQRIFSSSDNERLEFLGDAVLELAVSQYLFKTYKNMS 98
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G+++ +R+++V + A +A L K +L
Sbjct: 99 EGDMTKLRASIVCEPSLARFAEELQFGKLVL 129
>gi|330811510|ref|YP_004355972.1| ribonuclease III [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|378952613|ref|YP_005210101.1| ribonuclease III [Pseudomonas fluorescens F113]
gi|423699066|ref|ZP_17673556.1| ribonuclease III [Pseudomonas fluorescens Q8r1-96]
gi|327379618|gb|AEA70968.1| Ribonuclease III [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|359762627|gb|AEV64706.1| Ribonuclease III [Pseudomonas fluorescens F113]
gi|387996695|gb|EIK58025.1| ribonuclease III [Pseudomonas fluorescens Q8r1-96]
Length = 229
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
++LE+++ YTF+D+ +L AL+H ++ + +RLEFLGDAI++F+ L+E F
Sbjct: 6 SRLERQLGYTFKDQDLMLLALTHRSFAGR----NNERLEFLGDAILNFVAGEALFERFPL 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A DL +L S L
Sbjct: 62 AREGQLSRLRARLVKGETLAVLARGFDLGDYLRLGSGEL 100
>gi|148658678|ref|YP_001278883.1| ribonuclease III [Roseiflexus sp. RS-1]
gi|254807897|sp|A5V230.1|RNC_ROSS1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|148570788|gb|ABQ92933.1| RNAse III [Roseiflexus sp. RS-1]
Length = 237
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITT-----SYQRLEFLGDAIIDFLVTAYLYE 169
+L R+ TF D+ L QAL+H ++ + S +RLEFLGDAII+FL ++E
Sbjct: 7 ELSARLGVTFSDQRLLEQALTHSSFLNEHVEERMHLDSNERLEFLGDAIINFLAARLVFE 66
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
F GE++ R+A++ T A +A R +L ++L
Sbjct: 67 RFPDAGEGELTAWRTALIRTETLAGFAQRYNLGAYVL 103
>gi|18402610|ref|NP_566661.1| RNAse THREE-like protein 2 [Arabidopsis thaliana]
gi|75274109|sp|Q9LTQ0.1|RTL2_ARATH RecName: Full=Ribonuclease 3-like protein 2; AltName:
Full=Ribonuclease III-like protein 2; Short=RNase
III-like protein 2; AltName: Full=Ribonuclease
three-like protein 2
gi|9294562|dbj|BAB02825.1| unnamed protein product [Arabidopsis thaliana]
gi|332642855|gb|AEE76376.1| RNAse THREE-like protein 2 [Arabidopsis thaliana]
Length = 391
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 43/208 (20%)
Query: 76 LPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALS 135
LP S D+H PSA P + + +EK +NY F +KS L +A++
Sbjct: 31 LPSSA-DIHRFYNSLSPSAPSVPVSSE-------MESMEAVEKILNYKFSNKSLLKEAIT 82
Query: 136 HPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASY 195
H + SY+RLEF+GD+ I ++ YLY + L P ++S +R+A V+ A
Sbjct: 83 HTSCTD---FPSYERLEFIGDSAIGLAISNYLYLTYPSLEPHDLSLLRAANVSTEKLARV 139
Query: 196 AVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEK 255
++ L+ L ++P L E V F++ + ++
Sbjct: 140 SLNHGLYSFLRRNAPSLDEKVKEFSEA-----------------------------VGKE 170
Query: 256 DVQTDVYGRVVEYVDVPKALGDVFEALV 283
D + YG +V+ PK L D+FE+L
Sbjct: 171 DDLSVSYGGLVK---APKVLADLFESLA 195
>gi|326475978|gb|EGD99987.1| hypothetical protein TESG_07315 [Trichophyton tonsurans CBS 112818]
Length = 1435
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 78/154 (50%), Gaps = 20/154 (12%)
Query: 40 KLGDKVVADVVESLTGVYLRSCGIEGAM----LFLQALNILPQSKIDVHEALYGPHPS-A 94
+L K +ADVVESL G + G + LFL +N P + E L+ P
Sbjct: 1088 ELSTKTLADVVESLIGAAIIDGGENKVLRCLELFLPEINWQPSG--ERIEILFDSAPDFN 1145
Query: 95 VRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFL 154
CP +++E I+Y+F K+ L +LSHP+ +R+T YQRLEFL
Sbjct: 1146 DDCPRDI-----------MSKIEPLIDYSFTKKALLATSLSHPSNLISRMT--YQRLEFL 1192
Query: 155 GDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVN 188
GD+I+D +VT L+ + ++ IR+A+VN
Sbjct: 1193 GDSILDNIVTRALFRCKKEIPHQDMHLIRTALVN 1226
>gi|254360744|ref|ZP_04976892.1| ribonuclease III [Mannheimia haemolytica PHL213]
gi|452744321|ref|ZP_21944167.1| ribonuclease III [Mannheimia haemolytica serotype 6 str. H23]
gi|153091314|gb|EDN73288.1| ribonuclease III [Mannheimia haemolytica PHL213]
gi|452087566|gb|EME03943.1| ribonuclease III [Mannheimia haemolytica serotype 6 str. H23]
Length = 224
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+L+K++ Y F + +L+QAL+H + T + +RLEFLGD+I++F + LY+ F
Sbjct: 5 RLQKKLGYQFHNLDYLIQALTHRSA----ATKNNERLEFLGDSILNFTIGKVLYDKFPKA 60
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
+ GE+S +R+ +V T A A + DL +L
Sbjct: 61 NEGELSRMRATLVREQTLAIIARKFDLGDYL 91
>gi|333901418|ref|YP_004475291.1| ribonuclease 3 [Pseudomonas fulva 12-X]
gi|333116683|gb|AEF23197.1| Ribonuclease 3 [Pseudomonas fulva 12-X]
Length = 229
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
T+LE+++ ++F+D+ ++ AL+H ++ A R + +RLEFLGDAI++F+ LYE F
Sbjct: 6 TRLERQLGHSFKDQDLMILALTHRSF-AGR---NNERLEFLGDAILNFVAGEALYERFPQ 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A DL ++L S L
Sbjct: 62 AREGQLSRLRARLVKGETLAVLARGFDLGEYLRLGSGEL 100
>gi|160938006|ref|ZP_02085363.1| hypothetical protein CLOBOL_02899 [Clostridium bolteae ATCC
BAA-613]
gi|158439000|gb|EDP16755.1| hypothetical protein CLOBOL_02899 [Clostridium bolteae ATCC
BAA-613]
Length = 234
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 62/94 (65%), Gaps = 3/94 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTY-NANRITTSY--QRLEFLGDAIIDFLVTAYLYENF 171
+LE+RI Y F++K+ QAL+H +Y N +R+ S +RLEFLGDA+++ + + +LY +
Sbjct: 7 ELEERIAYEFKNKNLFTQALTHSSYANEHRLDHSRCNERLEFLGDAVLEIVTSEFLYRKY 66
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
L G+++ IR+++V T A A ++L ++L
Sbjct: 67 ETLPEGDLTKIRASIVCEPTLAYCAGDIELGQYL 100
>gi|337280491|ref|YP_004619963.1| ribonuclease III (RNase III) [Ramlibacter tataouinensis TTB310]
gi|334731568|gb|AEG93944.1| candidate ribonuclease III (RNase III) [Ramlibacter tataouinensis
TTB310]
Length = 230
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 4/91 (4%)
Query: 111 PECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYEN 170
P L++R+ + FQD L AL+H +++A +RLEFLGD++++ V LYE
Sbjct: 6 PALAALQERLQHRFQDPRLLALALTHRSFSAE----HNERLEFLGDSVLNLAVAGLLYER 61
Query: 171 FSHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
L GE+S +R+ +V T AVRL L
Sbjct: 62 LKDLPEGELSRVRANLVKQDTLHQLAVRLGL 92
>gi|255506876|ref|ZP_05382515.1| ribonuclease III [Chlamydia trachomatis D(s)2923]
gi|389857987|ref|YP_006360229.1| ribonuclease III [Chlamydia trachomatis F/SW4]
gi|389859739|ref|YP_006361979.1| ribonuclease III [Chlamydia trachomatis F/SW5]
gi|380249059|emb|CCE14350.1| ribonuclease III [Chlamydia trachomatis F/SW5]
gi|380249934|emb|CCE13461.1| ribonuclease III [Chlamydia trachomatis F/SW4]
gi|440526994|emb|CCP52478.1| ribonuclease III [Chlamydia trachomatis D/SotonD1]
gi|440531458|emb|CCP56968.1| ribonuclease III [Chlamydia trachomatis F/SotonF3]
Length = 231
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 107 LRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTS---YQRLEFLGDAIIDFLV 163
+++ + +E ++N+TF L+ AL+HP+Y N ++ +RLEFLGDA++ +V
Sbjct: 1 MQHTVDIQAIESKLNFTFSHPKLLITALTHPSYR-NEFPSAEEDSERLEFLGDAVLGLVV 59
Query: 164 TAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
T +L+ F L+ G +S R+A+VN Y +L L +HLL
Sbjct: 60 TEHLFLLFPALNEGLLSTTRAALVNAEACFEYTQKLSLGEHLL 102
>gi|255019675|ref|ZP_05291754.1| Ribonuclease III [Acidithiobacillus caldus ATCC 51756]
gi|340783042|ref|YP_004749649.1| ribonuclease III [Acidithiobacillus caldus SM-1]
gi|254970898|gb|EET28381.1| Ribonuclease III [Acidithiobacillus caldus ATCC 51756]
gi|340557193|gb|AEK58947.1| Ribonuclease III [Acidithiobacillus caldus SM-1]
Length = 232
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 55/104 (52%), Gaps = 4/104 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+L++ I Y FQD+ L QAL+H + A +RLEFLGDA ++F+V A LY F +
Sbjct: 6 RLQQAIGYVFQDEVLLRQALTHRSAGAQ----HNERLEFLGDAALNFVVAAELYARFPKV 61
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTR 218
S G +S +R+ +V T A A + L L+ L R
Sbjct: 62 SEGNLSRMRARLVREETLAQVAGEIALADSLILGPGELRSGGAR 105
>gi|386749829|ref|YP_006223036.1| ribonuclease III [Helicobacter cetorum MIT 00-7128]
gi|384556072|gb|AFI04406.1| ribonuclease III [Helicobacter cetorum MIT 00-7128]
Length = 234
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 56/91 (61%), Gaps = 3/91 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+LEK + Y F+DK L QAL+H +Y R + +RLEFLGDA++D ++ LY F
Sbjct: 15 KLEKDLGYFFKDKRLLEQALTHKSY---RQALNNERLEFLGDAVLDLIIGELLYHKFYQY 71
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
+ G++S +R+++V+ F + A + L +L
Sbjct: 72 NEGKLSKLRASIVSEQGFTTLAKVISLQDYL 102
>gi|317131320|ref|YP_004090634.1| ribonuclease III [Ethanoligenens harbinense YUAN-3]
gi|315469299|gb|ADU25903.1| ribonuclease III [Ethanoligenens harbinense YUAN-3]
Length = 226
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 5/95 (5%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITT----SYQRLEFLGDAIIDFLVTAYLYEN 170
+LEK + YTF DKS L AL+H +Y AN + S +RLEFLGDA++ + YLY +
Sbjct: 4 ELEKNLGYTFADKSLLENALTHSSY-ANEMKKHSCGSNERLEFLGDAVLGIISAEYLYFH 62
Query: 171 FSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
+ + GE++ +R++MV + +A ++L + L
Sbjct: 63 HTRVPEGELTRLRASMVCERSLQGFARTVELGRWL 97
>gi|456012685|gb|EMF46373.1| Ribonuclease III [Planococcus halocryophilus Or1]
Length = 251
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 58/95 (61%), Gaps = 3/95 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTY-NANRIT--TSYQRLEFLGDAIIDFLVTAYLYENF 171
QL+K +N TF + L QA +H +Y N +R T +RLEFLGDA+++ V+ YLY +
Sbjct: 25 QLQKELNITFNKPTLLYQAFTHSSYVNEHRRKQFTDNERLEFLGDAVLELSVSHYLYMKY 84
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+S GE++ +R+A+V + +A L K++L
Sbjct: 85 PEMSEGELTKLRAAIVCEPSLVLFANELGFGKYIL 119
>gi|452979125|gb|EME78888.1| hypothetical protein MYCFIDRAFT_43585 [Pseudocercospora fijiensis
CIRAD86]
Length = 1516
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 83/191 (43%), Gaps = 11/191 (5%)
Query: 39 IKLGDKVVADVVESLTGVYLRSCGIEGAML-------FLQALNILPQSKIDVHEALYGPH 91
+ LG+K +ADV E+L G S G ++A+ L +S D + +
Sbjct: 1134 VGLGEKTIADVCEALIGAAYLSHDKPGEAWEPEHWRDAVRAVTKLVKSD-DHKMQTWQDY 1192
Query: 92 PSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPT--YNANRITTSYQ 149
A P G ++EK YTF L A HP+ Y ++ SYQ
Sbjct: 1193 IDAYDKPAYQTGESTAVQKDLALRVEKEHAYTFTYPRLLYSAFMHPSVPYMYEKVP-SYQ 1251
Query: 150 RLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDS 209
RLEFLGDA++D YL+ + P +++ + AMV+N + V + HKHL H
Sbjct: 1252 RLEFLGDALLDMASITYLFYKYPDKDPQWLTEHKMAMVSNKFLGALCVDIGFHKHLRHHH 1311
Query: 210 PRLYENVTRFA 220
L V +A
Sbjct: 1312 ATLEHQVRDYA 1322
>gi|189219126|ref|YP_001939767.1| Ribonuclease III [Methylacidiphilum infernorum V4]
gi|189185984|gb|ACD83169.1| Ribonuclease III [Methylacidiphilum infernorum V4]
Length = 247
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 58/97 (59%), Gaps = 3/97 (3%)
Query: 112 ECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTS---YQRLEFLGDAIIDFLVTAYLY 168
+ +LEK++ Y F++ L +AL+HP++ I + +QRLEFLGDA++ VT L+
Sbjct: 2 QLEELEKKMGYAFKNPQLLEEALTHPSFFVESIRVNKGDFQRLEFLGDAVLGLAVTEKLF 61
Query: 169 ENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
+ F G+++ +R+ +V+ S A L++ K+L
Sbjct: 62 QLFPSFDEGKLTKLRARLVSRKNLCSLASLLEIGKYL 98
>gi|402299450|ref|ZP_10819056.1| ribonuclease III [Bacillus alcalophilus ATCC 27647]
gi|401725368|gb|EJS98656.1| ribonuclease III [Bacillus alcalophilus ATCC 27647]
Length = 263
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 61/94 (64%), Gaps = 3/94 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTY-NANRITT--SYQRLEFLGDAIIDFLVTAYLYENFS 172
L+ I +TF++K L+QA +H +Y N +RI T +RLEFLGDA+++ V+ +L++ F
Sbjct: 38 LQADIGFTFENKKLLIQAFTHSSYVNEHRIYTFQDNERLEFLGDAVLELAVSQFLFKKFK 97
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+S G+++ +R+++V + A +A L + +L
Sbjct: 98 AMSEGDMTKLRASIVCEPSLAKFAEELQFGQLVL 131
>gi|402309780|ref|ZP_10828755.1| ribonuclease III [Eubacterium sp. AS15]
gi|400370906|gb|EJP23887.1| ribonuclease III [Eubacterium sp. AS15]
Length = 233
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
Q+E I Y F++K++L AL+H +Y N +++T +RLEFLGD+++ +V+ Y++ S
Sbjct: 11 QVENTIGYKFKNKNYLQIALTHSSYVNEHKLTKDNERLEFLGDSVLGLIVSNYIFAYKSS 70
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
L GE++ IRS +V + A +L + +++
Sbjct: 71 LKEGELTKIRSTIVCEKSLMHIAEKLKIGQYI 102
>gi|392960548|ref|ZP_10326016.1| Ribonuclease 3 [Pelosinus fermentans DSM 17108]
gi|421054695|ref|ZP_15517660.1| ribonuclease III [Pelosinus fermentans B4]
gi|421061063|ref|ZP_15523447.1| Ribonuclease 3 [Pelosinus fermentans B3]
gi|421063755|ref|ZP_15525701.1| Ribonuclease 3 [Pelosinus fermentans A12]
gi|421071558|ref|ZP_15532674.1| Ribonuclease 3 [Pelosinus fermentans A11]
gi|392440376|gb|EIW18056.1| ribonuclease III [Pelosinus fermentans B4]
gi|392446823|gb|EIW24094.1| Ribonuclease 3 [Pelosinus fermentans A11]
gi|392452138|gb|EIW29091.1| Ribonuclease 3 [Pelosinus fermentans B3]
gi|392455125|gb|EIW31932.1| Ribonuclease 3 [Pelosinus fermentans DSM 17108]
gi|392462325|gb|EIW38420.1| Ribonuclease 3 [Pelosinus fermentans A12]
Length = 242
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 5/96 (5%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSY----QRLEFLGDAIIDFLVTAYLYE 169
++L + F D + L QAL+H +Y AN S +RLEFLGDA++D +V+ YL+
Sbjct: 14 SRLSNTLGVQFTDINLLHQALTHTSY-ANECKKSLISHNERLEFLGDAVLDLIVSEYLFR 72
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
FSHL GE++ R+ +V T A A L + ++L
Sbjct: 73 QFSHLPEGELTKARAVIVCEPTLARCAAELGIGEYL 108
>gi|59712694|ref|YP_205470.1| ribonuclease III [Vibrio fischeri ES114]
gi|197335272|ref|YP_002156886.1| ribonuclease III [Vibrio fischeri MJ11]
gi|423686829|ref|ZP_17661637.1| ribonuclease III [Vibrio fischeri SR5]
gi|75431522|sp|Q5E314.1|RNC_VIBF1 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|59480795|gb|AAW86582.1| RNase III [Vibrio fischeri ES114]
gi|197316762|gb|ACH66209.1| ribonuclease III [Vibrio fischeri MJ11]
gi|371494897|gb|EHN70495.1| ribonuclease III [Vibrio fischeri SR5]
Length = 223
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+LEK+I Y F+D+SFL AL+H + N T +RLEFLGD+I+ F+V LY F +
Sbjct: 7 RLEKKIGYQFKDESFLKLALTHRSANG----THNERLEFLGDSILSFVVADDLYHRFPKV 62
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G++S +R+ +V T A L +L
Sbjct: 63 DEGDMSRMRATLVRGHTLAELGREFQLGDYL 93
>gi|226943497|ref|YP_002798570.1| ribonuclease III [Azotobacter vinelandii DJ]
gi|259491898|sp|C1DQS2.1|RNC_AZOVD RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|226718424|gb|ACO77595.1| ribonuclease III [Azotobacter vinelandii DJ]
Length = 229
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
+LE+++ +TF+++ +L AL+H ++ + + +RLEFLGDAI++F+ L+E F
Sbjct: 6 NRLERKLGHTFKNQDLMLLALTHRSF----ASRNNERLEFLGDAILNFVAGEALFERFPQ 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A DL HL S L
Sbjct: 62 AKEGQLSRLRARLVKGETLALLARGFDLGDHLRLGSGEL 100
>gi|404378090|ref|ZP_10983189.1| ribonuclease III [Simonsiella muelleri ATCC 29453]
gi|294483954|gb|EFG31637.1| ribonuclease III [Simonsiella muelleri ATCC 29453]
Length = 235
Score = 67.4 bits (163), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+L++ IN+ F++ + + QAL+H +Y++ +Y+RLEF+GD+I++++V LYE F L
Sbjct: 12 KLQQEINFLFKNPNLIQQALTHRSYSSQ----NYERLEFIGDSILNYVVAKMLYEAFPKL 67
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G +S +R+ +V T A A +L + L
Sbjct: 68 PEGRLSPLRAQLVKEATLADIARQLHIGDALF 99
>gi|357464753|ref|XP_003602658.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
gi|355491706|gb|AES72909.1| Endoribonuclease Dicer-like protein [Medicago truncatula]
Length = 344
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 34/167 (20%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
+EK I YTF++K+ L +AL+H +Y + SY+RLEF+GDA++ ++ +L+ ++++
Sbjct: 12 VEKIIGYTFRNKNLLEEALTHSSYPE---SVSYERLEFIGDAVLGHAISNHLFLVYTNVD 68
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEE 235
++S +RSA V+ A AV LH+++ + L E++ FA
Sbjct: 69 QRQLSLLRSANVSTEKLARAAVSNCLHRYIRLKTHSLAEHIREFAA-------------- 114
Query: 236 EEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEAL 282
E+E+G R ++ YG V+ PK L DV E++
Sbjct: 115 AVEQEKG--RAIVL------------YGGAVK---APKVLADVVESV 144
>gi|51245097|ref|YP_064981.1| ribonuclease III [Desulfotalea psychrophila LSv54]
gi|81642476|sp|Q6ANV0.1|RNC_DESPS RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|50876134|emb|CAG35974.1| related to ribonuclease III [Desulfotalea psychrophila LSv54]
Length = 241
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTY--NANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+ EK+INY F D L +AL H +Y + + +RLEF+GDA++D +V LY F
Sbjct: 17 AEFEKKINYKFIDLRLLQKALIHSSYAFEQAQAGKNNERLEFVGDAVLDLVVGNALYRRF 76
Query: 172 SHLSPGEISDIRSAMVNNVTFASYAVRLDL 201
+ GE++ +R+A+VN A+ A +++L
Sbjct: 77 PEMREGELTRLRAALVNEGHLATMARKINL 106
>gi|385816004|ref|YP_005852395.1| Ribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus 2038]
gi|418035104|ref|ZP_12673563.1| Ribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1519]
gi|325126041|gb|ADY85371.1| Ribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus 2038]
gi|354691042|gb|EHE90982.1| Ribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1519]
Length = 231
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
L+++ F+D L +A +H +Y N + +Y++LEFLGDA+++F V+ YLY +F
Sbjct: 10 LDEKYGIRFKDVRLLEEAFTHSSYVNENPGKTLGNYEKLEFLGDAVLEFTVSDYLYRHFQ 69
Query: 173 HLSPGEISDIRSAMVNNVTFASYAV 197
HL+ GE++ +RS +V F+ A+
Sbjct: 70 HLNEGELTRLRSNIVRTEGFSKVAL 94
>gi|306819680|ref|ZP_07453341.1| ribonuclease III [Eubacterium yurii subsp. margaretiae ATCC 43715]
gi|304552246|gb|EFM40176.1| ribonuclease III [Eubacterium yurii subsp. margaretiae ATCC 43715]
Length = 233
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 59/92 (64%), Gaps = 1/92 (1%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
Q+E I Y F++K++L AL+H +Y N +++T +RLEFLGD+++ +V+ Y++ S
Sbjct: 11 QVENTIGYKFKNKNYLQIALTHSSYVNEHKLTKDNERLEFLGDSVLGLIVSNYIFAYKSS 70
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
L GE++ IRS +V + A +L + +++
Sbjct: 71 LKEGELTKIRSTIVCEKSLMHIAEKLKIGQYI 102
>gi|116514343|ref|YP_813249.1| ribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|418028850|ref|ZP_12667399.1| Ribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1632]
gi|116093658|gb|ABJ58811.1| RNAse III [Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|354691187|gb|EHE91125.1| Ribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus CNCM
I-1632]
Length = 231
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
L+++ F+D L +A +H +Y N + +Y++LEFLGDA+++F V+ YLY +F
Sbjct: 10 LDEKYGIRFKDVRLLEEAFTHSSYLNENPGKTLGNYEKLEFLGDAVLEFTVSDYLYRHFQ 69
Query: 173 HLSPGEISDIRSAMVNNVTFASYAV 197
HL+ GE++ +RS +V F+ A+
Sbjct: 70 HLNEGELTRLRSNIVRTEGFSKVAL 94
>gi|300811711|ref|ZP_07092185.1| ribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300497287|gb|EFK32335.1| ribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 231
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
L+++ F+D L +A +H +Y N + +Y++LEFLGDA+++F V+ YLY +F
Sbjct: 10 LDEKYGIRFKDVRLLEEAFTHSSYVNENPGKTLGNYEKLEFLGDAVLEFTVSDYLYRHFQ 69
Query: 173 HLSPGEISDIRSAMVNNVTFASYAV 197
HL+ GE++ +RS +V F+ A+
Sbjct: 70 HLNEGELTRLRSNIVRTEGFSKVAL 94
>gi|15605018|ref|NP_219802.1| ribonuclease III [Chlamydia trachomatis D/UW-3/CX]
gi|76789019|ref|YP_328105.1| ribonuclease III [Chlamydia trachomatis A/HAR-13]
gi|237802720|ref|YP_002887914.1| ribonuclease III [Chlamydia trachomatis B/Jali20/OT]
gi|237804642|ref|YP_002888796.1| ribonuclease III [Chlamydia trachomatis B/TZ1A828/OT]
gi|255311099|ref|ZP_05353669.1| ribonuclease III [Chlamydia trachomatis 6276]
gi|255317400|ref|ZP_05358646.1| ribonuclease III [Chlamydia trachomatis 6276s]
gi|376282301|ref|YP_005156127.1| ribonuclease III [Chlamydia trachomatis A2497]
gi|385239809|ref|YP_005807651.1| ribonuclease III [Chlamydia trachomatis G/9768]
gi|385240731|ref|YP_005808572.1| ribonuclease III [Chlamydia trachomatis G/11222]
gi|385242585|ref|YP_005810424.1| ribonuclease III [Chlamydia trachomatis G/9301]
gi|385243503|ref|YP_005811349.1| Ribonuclease III [Chlamydia trachomatis D-EC]
gi|385244383|ref|YP_005812227.1| Ribonuclease III [Chlamydia trachomatis D-LC]
gi|385246195|ref|YP_005815017.1| ribonuclease III [Chlamydia trachomatis G/11074]
gi|385269975|ref|YP_005813135.1| Ribonuclease III [Chlamydia trachomatis A2497]
gi|7531193|sp|O84299.1|RNC_CHLTR RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|90101618|sp|Q3KM65.1|RNC_CHLTA RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|3328712|gb|AAC67890.1| Ribonuclease III [Chlamydia trachomatis D/UW-3/CX]
gi|76167549|gb|AAX50557.1| ribonuclease III [Chlamydia trachomatis A/HAR-13]
gi|231272942|emb|CAX09853.1| ribonuclease III [Chlamydia trachomatis B/TZ1A828/OT]
gi|231273954|emb|CAX10746.1| ribonuclease III [Chlamydia trachomatis B/Jali20/OT]
gi|296435814|gb|ADH17988.1| ribonuclease III [Chlamydia trachomatis G/9768]
gi|296436739|gb|ADH18909.1| ribonuclease III [Chlamydia trachomatis G/11222]
gi|296437674|gb|ADH19835.1| ribonuclease III [Chlamydia trachomatis G/11074]
gi|297140173|gb|ADH96931.1| ribonuclease III [Chlamydia trachomatis G/9301]
gi|297748426|gb|ADI50972.1| Ribonuclease III [Chlamydia trachomatis D-EC]
gi|297749306|gb|ADI51984.1| Ribonuclease III [Chlamydia trachomatis D-LC]
gi|347975115|gb|AEP35136.1| Ribonuclease III [Chlamydia trachomatis A2497]
gi|371908331|emb|CAX08959.1| ribonuclease III [Chlamydia trachomatis A2497]
gi|438690220|emb|CCP49477.1| ribonuclease III [Chlamydia trachomatis A/7249]
gi|438691304|emb|CCP48578.1| ribonuclease III [Chlamydia trachomatis A/5291]
gi|438692677|emb|CCP47679.1| ribonuclease III [Chlamydia trachomatis A/363]
gi|440525210|emb|CCP50461.1| ribonuclease III [Chlamydia trachomatis K/SotonK1]
gi|440527886|emb|CCP53370.1| ribonuclease III [Chlamydia trachomatis D/SotonD5]
gi|440528777|emb|CCP54261.1| ribonuclease III [Chlamydia trachomatis D/SotonD6]
gi|440532350|emb|CCP57860.1| ribonuclease III [Chlamydia trachomatis G/SotonG1]
gi|440533244|emb|CCP58754.1| ribonuclease III [Chlamydia trachomatis Ia/SotonIa1]
gi|440534138|emb|CCP59648.1| ribonuclease III [Chlamydia trachomatis Ia/SotonIa3]
Length = 231
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 107 LRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTS---YQRLEFLGDAIIDFLV 163
+++ + +E ++N+TF L+ AL+HP+Y N ++ +RLEFLGDA++ +V
Sbjct: 1 MQHTVDIQAIESKLNFTFSHPRLLITALTHPSYR-NEFPSAEEDSERLEFLGDAVLGLVV 59
Query: 164 TAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
T +L+ F L+ G +S R+A+VN Y +L L +HLL
Sbjct: 60 TEHLFLLFPALNEGLLSTTRAALVNAEACFEYTQKLSLGEHLL 102
>gi|297834980|ref|XP_002885372.1| hypothetical protein ARALYDRAFT_479566 [Arabidopsis lyrata subsp.
lyrata]
gi|297331212|gb|EFH61631.1| hypothetical protein ARALYDRAFT_479566 [Arabidopsis lyrata subsp.
lyrata]
Length = 391
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 61/105 (58%), Gaps = 3/105 (2%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LEK +NY F++KS L +A++H + SY+RLEF+GD+ I ++ YLY + L
Sbjct: 63 LEKILNYKFKNKSLLKEAITHTSCTD---FPSYERLEFVGDSAIGLAISNYLYLTYPSLE 119
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFA 220
P ++S +R+A V+ A + L++ L ++P L E V F+
Sbjct: 120 PHQLSLLRAANVSTEKLARVTLNHGLYQFLRRNAPSLDEKVKEFS 164
>gi|17511264|gb|AAK68755.2| Unknown protein [Arabidopsis thaliana]
gi|20148705|gb|AAM10243.1| unknown protein [Arabidopsis thaliana]
Length = 391
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 92/208 (44%), Gaps = 43/208 (20%)
Query: 76 LPQSKIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALS 135
LP S D+H PSA P + + +EK +NY F +KS L +A++
Sbjct: 31 LPSSA-DIHRFYNSLSPSAPSVPVSSE-------MESMEAVEKILNYKFSNKSLLKEAVT 82
Query: 136 HPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASY 195
H + SY+RLEF+GD+ I ++ YLY + L P ++S +R+A V+ A
Sbjct: 83 HTSCTD---FPSYERLEFIGDSAIGLAISNYLYLTYPSLEPHDLSLLRAANVSTEKLARV 139
Query: 196 AVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEEEEEEEEGIVRCLIFFLIEEK 255
++ L+ L ++P L E V F++ + ++
Sbjct: 140 SLNHGLYSFLRRNAPSLDEKVKEFSEA-----------------------------VGKE 170
Query: 256 DVQTDVYGRVVEYVDVPKALGDVFEALV 283
D + YG +V+ PK L D+FE+L
Sbjct: 171 DDLSVSYGGLVK---APKVLADLFESLA 195
>gi|312111708|ref|YP_003990024.1| ribonuclease III [Geobacillus sp. Y4.1MC1]
gi|336236083|ref|YP_004588699.1| ribonuclease III [Geobacillus thermoglucosidasius C56-YS93]
gi|423720626|ref|ZP_17694808.1| ribonuclease III [Geobacillus thermoglucosidans TNO-09.020]
gi|311216809|gb|ADP75413.1| ribonuclease III [Geobacillus sp. Y4.1MC1]
gi|335362938|gb|AEH48618.1| ribonuclease III [Geobacillus thermoglucosidasius C56-YS93]
gi|383365979|gb|EID43270.1| ribonuclease III [Geobacillus thermoglucosidans TNO-09.020]
Length = 246
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+L+K+I F ++ L+QA +H +Y + R +RLEFLGDA+++ V+ YL++ F
Sbjct: 20 ELQKKIGIFFTNEKLLIQAFTHSSYVNEHRKRPHEDNERLEFLGDAVLELTVSQYLFKKF 79
Query: 172 SHLSPGEISDIRSAMVNNVTFASYA 196
H+S GE++ +R+A+V + +A
Sbjct: 80 PHMSEGELTKLRAAIVCEPSLVKFA 104
>gi|240146505|ref|ZP_04745106.1| ribonuclease III [Roseburia intestinalis L1-82]
gi|257201361|gb|EEU99645.1| ribonuclease III [Roseburia intestinalis L1-82]
gi|291535139|emb|CBL08251.1| RNAse III [Roseburia intestinalis M50/1]
Length = 228
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSY---QRLEFLGDAIIDFLVTAY 166
+ + +L+ RI YTF+ + L QAL+H +Y + + +RLEFLGDA+++ + + +
Sbjct: 1 MSKLQELQNRIGYTFEKEGLLRQALTHSSYANEKHMKKHSDNERLEFLGDAVLEIVSSDF 60
Query: 167 LYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
LY N+ L G+++ +R+++V T A +DL +LL
Sbjct: 61 LYRNYPDLPEGDLTKLRASIVCEPTLALCTREMDLGDYLL 100
>gi|333897188|ref|YP_004471062.1| ribonuclease 3 [Thermoanaerobacterium xylanolyticum LX-11]
gi|333112453|gb|AEF17390.1| Ribonuclease 3 [Thermoanaerobacterium xylanolyticum LX-11]
Length = 232
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 63/117 (53%), Gaps = 11/117 (9%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTY--NANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
LEK + YTF +K L AL+H ++ + +S +RLEFLGD+++ +++ YLY+N +
Sbjct: 9 NLEKNMGYTFNNKKLLKNALTHSSWANESKNFLSSNERLEFLGDSVLSIVISEYLYKNRT 68
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHE 229
L G +S R+ +V + A A +D+ K+L N+ R + RN +
Sbjct: 69 DLEEGYLSKYRAEIVCEPSLARCAREIDIGKYL---------NIGRGEEMTGGRNRD 116
>gi|291539668|emb|CBL12779.1| RNAse III [Roseburia intestinalis XB6B4]
Length = 228
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 60/100 (60%), Gaps = 3/100 (3%)
Query: 110 IPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSY---QRLEFLGDAIIDFLVTAY 166
+ + +L+ RI YTF+ + L QAL+H +Y + + +RLEFLGDA+++ + + +
Sbjct: 1 MSKLQELQNRIGYTFEKEGLLRQALTHSSYANEKHMKKHSDNERLEFLGDAVLEIVSSDF 60
Query: 167 LYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
LY N+ L G+++ +R+++V T A +DL +LL
Sbjct: 61 LYRNYPDLPEGDLTKLRASIVCEPTLALCTREMDLGDYLL 100
>gi|229828999|ref|ZP_04455068.1| hypothetical protein GCWU000342_01084 [Shuttleworthia satelles DSM
14600]
gi|229792162|gb|EEP28276.1| hypothetical protein GCWU000342_01084 [Shuttleworthia satelles DSM
14600]
Length = 230
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 55/89 (61%), Gaps = 3/89 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSY---QRLEFLGDAIIDFLVTAYLYENFS 172
LE +I Y FQDKS L QAL+H ++ R ++ +RLEFLGDA+++ + + +LY N+
Sbjct: 6 LEAKIGYQFQDKSLLRQALTHSSFANERHMKAHSDNERLEFLGDAVLEVVSSEFLYLNYP 65
Query: 173 HLSPGEISDIRSAMVNNVTFASYAVRLDL 201
L G ++ +R+++V T A A + L
Sbjct: 66 DLPEGRLTPLRASLVCEPTLAIAAREIGL 94
>gi|126654291|ref|ZP_01726068.1| ribonuclease III [Bacillus sp. B14905]
gi|126589255|gb|EAZ83416.1| ribonuclease III [Bacillus sp. B14905]
Length = 254
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGD 156
Q G+ P + + L+ +N TF +K+ L QA +H +Y + ++ T +RLEFLGD
Sbjct: 10 QKSGVLPEKVRNQFELLQHELNITFVNKNLLYQAFTHSSYVNEHRRKLFTDNERLEFLGD 69
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
A+++ V+ YL+E + ++S GE++ +R+++V + +A L + +L
Sbjct: 70 AVLELSVSKYLFEKYPNMSEGELTKLRASIVCEPSLVIFANELGFGRFVL 119
>gi|358348326|ref|XP_003638198.1| Endoribonuclease Dicer-like protein, partial [Medicago truncatula]
gi|355504133|gb|AES85336.1| Endoribonuclease Dicer-like protein, partial [Medicago truncatula]
Length = 472
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 86/167 (51%), Gaps = 34/167 (20%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
+EK I YTF++K+ L +AL+H +Y + SY+RLEF+GDA++ ++ +L+ ++++
Sbjct: 117 VEKIIGYTFRNKNLLEEALTHSSYPE---SVSYERLEFIGDAVLGHAISNHLFLVYTNVD 173
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRLYENVTRFAQNQEARNHEISDEEE 235
++S +RSA V+ A AV LH+++ + L E++ FA
Sbjct: 174 QRQLSLLRSANVSTEKLARAAVSNCLHRYIRLKTHSLAEHIREFAA-------------- 219
Query: 236 EEEEEEGIVRCLIFFLIEEKDVQTDVYGRVVEYVDVPKALGDVFEAL 282
E+E+G R ++ YG V+ PK L DV E++
Sbjct: 220 AVEQEKG--RAIVL------------YGGAVK---APKVLADVVESV 249
>gi|338811275|ref|ZP_08623500.1| ribonuclease III [Acetonema longum DSM 6540]
gi|337276744|gb|EGO65156.1| ribonuclease III [Acetonema longum DSM 6540]
Length = 239
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 56/103 (54%), Gaps = 5/103 (4%)
Query: 108 RYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRIT----TSYQRLEFLGDAIIDFLV 163
R I + L +I F D QAL H +Y AN +RLEFLGDA++D ++
Sbjct: 5 RRIRTLSALSDKIGIRFSDLILFHQALIHTSY-ANEYKGVDIVDNERLEFLGDAVLDLVI 63
Query: 164 TAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
+ YLY F L GE++ R+ +V T A +AV+L + +HLL
Sbjct: 64 SDYLYRYFPRLPEGELTKARATIVCEQTLAQHAVKLGIGEHLL 106
>gi|317154737|ref|YP_004122785.1| ribonuclease III [Desulfovibrio aespoeensis Aspo-2]
gi|316944988|gb|ADU64039.1| ribonuclease III [Desulfovibrio aespoeensis Aspo-2]
Length = 230
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTY-NANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
L++RI++ F + AL+H ++ N +RLEFLGDA+++ ++ Y F H
Sbjct: 6 LQQRIHHRFGQVKLMEAALTHSSHANEQEGDGDNERLEFLGDAVLELCISEEGYRRFPHA 65
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
G+++ IRS +V + A+ A LDLH+H+L
Sbjct: 66 PEGQLTRIRSQLVKEKSLAAIARSLDLHRHIL 97
>gi|166154508|ref|YP_001654626.1| ribonuclease III [Chlamydia trachomatis 434/Bu]
gi|255348658|ref|ZP_05380665.1| ribonuclease III [Chlamydia trachomatis 70]
gi|255503198|ref|ZP_05381588.1| ribonuclease III [Chlamydia trachomatis 70s]
gi|301335768|ref|ZP_07224012.1| ribonuclease III [Chlamydia trachomatis L2tet1]
gi|339625959|ref|YP_004717438.1| ribonuclease III [Chlamydia trachomatis L2c]
gi|385241664|ref|YP_005809504.1| ribonuclease III [Chlamydia trachomatis E/11023]
gi|385245271|ref|YP_005814094.1| ribonuclease III [Chlamydia trachomatis E/150]
gi|386262648|ref|YP_005815927.1| ribonuclease III [Chlamydia trachomatis Sweden2]
gi|389858863|ref|YP_006361104.1| ribonuclease III [Chlamydia trachomatis E/SW3]
gi|238687367|sp|B0B7L3.1|RNC_CHLT2 RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|165930496|emb|CAP03989.1| ribonuclease III [Chlamydia trachomatis 434/Bu]
gi|289525336|emb|CBJ14812.1| ribonuclease III [Chlamydia trachomatis Sweden2]
gi|296434887|gb|ADH17065.1| ribonuclease III [Chlamydia trachomatis E/150]
gi|296438607|gb|ADH20760.1| ribonuclease III [Chlamydia trachomatis E/11023]
gi|339460721|gb|AEJ77224.1| ribonuclease III [Chlamydia trachomatis L2c]
gi|380250812|emb|CCE12572.1| ribonuclease III [Chlamydia trachomatis E/SW3]
gi|440529667|emb|CCP55151.1| ribonuclease III [Chlamydia trachomatis E/SotonE4]
gi|440530566|emb|CCP56050.1| ribonuclease III [Chlamydia trachomatis E/SotonE8]
gi|440535033|emb|CCP60543.1| ribonuclease III [Chlamydia trachomatis E/Bour]
gi|440536814|emb|CCP62328.1| ribonuclease III [Chlamydia trachomatis L1/440/LN]
gi|440537705|emb|CCP63219.1| ribonuclease III [Chlamydia trachomatis L1/1322/p2]
gi|440538595|emb|CCP64109.1| ribonuclease III [Chlamydia trachomatis L1/115]
gi|440539483|emb|CCP64997.1| ribonuclease III [Chlamydia trachomatis L1/224]
gi|440540374|emb|CCP65888.1| ribonuclease III [Chlamydia trachomatis L2/25667R]
gi|440541263|emb|CCP66777.1| ribonuclease III [Chlamydia trachomatis L3/404/LN]
Length = 231
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 61/103 (59%), Gaps = 4/103 (3%)
Query: 107 LRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTS---YQRLEFLGDAIIDFLV 163
+++ + +E ++N+TF L+ AL+HP+Y N ++ +RLEFLGDA++ +V
Sbjct: 1 MQHTVDIQAIESKLNFTFSHPRLLITALTHPSYR-NEFPSAEEDSERLEFLGDAVLGLVV 59
Query: 164 TAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
T +L+ F L+ G +S R+A+VN Y +L L +HLL
Sbjct: 60 TEHLFLLFPALNEGLLSTTRAALVNAEACFEYTQKLSLGEHLL 102
>gi|255933596|ref|XP_002558177.1| Pc12g13700 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582796|emb|CAP80997.1| Pc12g13700 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1393
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 79/159 (49%), Gaps = 12/159 (7%)
Query: 41 LGDKVVADVVESLTGVYLRSCGIEGAMLFLQALNILPQSKIDVHEALYGPHPSAVRCPEQ 100
+ KV+ADVVESL G GI A L LP+ L+ S + P Q
Sbjct: 1046 ISTKVLADVVESLIGAAYVDGGIREAQACLH--RFLPEIN------LFTNDISPLILP-Q 1096
Query: 101 ARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIID 160
+G+ L +L I YTF D + L +AL+H + + T SYQRLEFLGDA++D
Sbjct: 1097 GKGVSNL---INHHRLAGLIGYTFNDPALLTEALTHASCEYDTSTQSYQRLEFLGDAVLD 1153
Query: 161 FLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRL 199
+V A + + + G ++ ++ ++VN A + + L
Sbjct: 1154 MVVMAVIAGHPVEMDQGPMTLLKHSVVNANLLAFFCMEL 1192
Score = 46.2 bits (108), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 72/152 (47%), Gaps = 28/152 (18%)
Query: 75 ILPQS-----KIDVHEALYGPHPSAVRCPEQARGLDPLRYIPECTQLEKRINYTF----- 124
ILP + K+ +A++G SA+ LD L E + + R+N T
Sbjct: 892 ILPAAACVIDKLPAKQAVFGLFISAI--------LDRL----EASLVAHRLNDTILKGVG 939
Query: 125 -QDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLSPGEISDIR 183
+D + ++ A+S P A +T+YQR EF GD+++ F V+ L+ + G +S+ R
Sbjct: 940 IKDIAHVITAISAPIAQA---STNYQRYEFFGDSVLKFTVSCQLFFRNGNWHEGYLSESR 996
Query: 184 SAMVNNVTFASYAVRLDLHKHLLHD--SPRLY 213
++ N A A+ L + +L +PR +
Sbjct: 997 DKLIQNSRLARAALDLGIDSFVLTSRFTPRKW 1028
>gi|261492470|ref|ZP_05989024.1| ribonuclease III [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261496943|ref|ZP_05993311.1| ribonuclease III [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261307467|gb|EEY08802.1| ribonuclease III [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261311833|gb|EEY12982.1| ribonuclease III [Mannheimia haemolytica serotype A2 str. BOVINE]
Length = 224
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
+L+K++ Y F + +L+QAL+H + T + +RLEFLGD+I++F + LY+ F
Sbjct: 5 RLQKKLGYQFHNLDYLIQALTHRSA----ATKNNERLEFLGDSILNFTIGKVLYDKFPKS 60
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
+ GE+S +R+ +V T A A + DL +L
Sbjct: 61 NEGELSRMRATLVREQTLAIIARKFDLGDYL 91
>gi|237752001|ref|ZP_04582481.1| ribonuclease III [Helicobacter winghamensis ATCC BAA-430]
gi|229376568|gb|EEO26659.1| ribonuclease III [Helicobacter winghamensis ATCC BAA-430]
Length = 223
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 56/92 (60%), Gaps = 3/92 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHL 174
EK + Y F+ ++ L +AL+H + + T +RLEFLGDA++D ++ +LY F +
Sbjct: 6 HFEKTLGYHFKAQNLLKEALTHKSA---KKGTHNERLEFLGDAVLDLIIGEFLYNKFPNS 62
Query: 175 SPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
GE+S +R++MVN FA A L++ ++L
Sbjct: 63 REGELSKMRASMVNEKAFAKIARYLNIGEYLF 94
>gi|239826585|ref|YP_002949209.1| ribonuclease III [Geobacillus sp. WCH70]
gi|259491901|sp|C5D8T6.1|RNC_GEOSW RecName: Full=Ribonuclease 3; AltName: Full=Ribonuclease III;
Short=RNase III
gi|239806878|gb|ACS23943.1| ribonuclease III [Geobacillus sp. WCH70]
Length = 246
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 115 QLEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAYLYENF 171
+L+K+I F ++ L+QA +H +Y + R +RLEFLGDA+++ V+ YL++ F
Sbjct: 20 ELQKKIGIFFTNEKLLIQAFTHSSYVNEHRRRPHEDNERLEFLGDAVLELTVSQYLFKKF 79
Query: 172 SHLSPGEISDIRSAMVNNVTFASYA 196
H+S GE++ +R+A+V + +A
Sbjct: 80 PHMSEGELTKLRAAIVCEPSLVKFA 104
>gi|399545692|ref|YP_006559000.1| ribonuclease 3 [Marinobacter sp. BSs20148]
gi|399161024|gb|AFP31587.1| Ribonuclease 3 [Marinobacter sp. BSs20148]
Length = 229
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Query: 111 PECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYEN 170
P+ L++RI Y F+ + LL AL+H ++ + +RLEFLGD+I++ ++ +L+
Sbjct: 5 PDLEPLQRRIGYQFKSQERLLLALTHRSFG----NQNNERLEFLGDSIVNMVIAEHLFRR 60
Query: 171 FSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
F G++S +R+ MV VT A DL +L S L
Sbjct: 61 FPKAREGQLSRLRARMVKGVTLAEIGREFDLGSYLRLGSGEL 102
>gi|296273889|ref|YP_003656520.1| ribonuclease III [Arcobacter nitrofigilis DSM 7299]
gi|296098063|gb|ADG94013.1| ribonuclease III [Arcobacter nitrofigilis DSM 7299]
Length = 223
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
LEK ++Y F++K +++AL+H ++ + + +RLEFLGDA+++ +V YLY+ F +
Sbjct: 7 LEKCLDYQFKNKDLIVEALTHKSF---KKPYNNERLEFLGDAVLNLIVGEYLYKKFPQSN 63
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDLHKHL 205
G++S IR+++VN F A + L ++
Sbjct: 64 EGDLSKIRASLVNETGFTKLANEIKLGDYI 93
>gi|226313209|ref|YP_002773103.1| ribonuclease III [Brevibacillus brevis NBRC 100599]
gi|226096157|dbj|BAH44599.1| ribonuclease III [Brevibacillus brevis NBRC 100599]
Length = 246
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 56/87 (64%), Gaps = 5/87 (5%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTY----NANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
QL++ I + F+D+S L QA +H +Y RI+ + +RLEFLGDA+++ V+ +LY+
Sbjct: 22 AQLQETIGFRFRDESVLRQAFTHSSYVNEQRGKRISDN-ERLEFLGDAVLELTVSQFLYK 80
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYA 196
F +S GE++ +R+A+V + +A
Sbjct: 81 TFPKMSEGEMTKLRAAIVCEPSLVKFA 107
>gi|169827094|ref|YP_001697252.1| ribonuclease 3 [Lysinibacillus sphaericus C3-41]
gi|168991582|gb|ACA39122.1| Ribonuclease 3 [Lysinibacillus sphaericus C3-41]
Length = 254
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 65/110 (59%), Gaps = 3/110 (2%)
Query: 100 QARGLDPLRYIPECTQLEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGD 156
Q G+ P + + L+ +N TF +K+ L QA +H +Y + ++ T +RLEFLGD
Sbjct: 10 QKSGVLPEKVRNQFELLQHELNITFINKNLLYQAFTHSSYVNEHRRKLFTDNERLEFLGD 69
Query: 157 AIIDFLVTAYLYENFSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLL 206
A+++ V+ YL+E + ++S GE++ +R+++V + +A L + +L
Sbjct: 70 AVLELSVSKYLFEKYPNMSEGELTKLRASIVCEPSLVIFANELGFGRFVL 119
>gi|104774253|ref|YP_619233.1| ribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus ATCC
11842]
gi|103423334|emb|CAI98181.1| Ribonuclease III [Lactobacillus delbrueckii subsp. bulgaricus ATCC
11842]
Length = 231
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 54/85 (63%), Gaps = 3/85 (3%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTY---NANRITTSYQRLEFLGDAIIDFLVTAYLYENFS 172
L+++ F+D L +A +H +Y N + +Y++LEFLGDA+++F V+ YLY +F
Sbjct: 10 LDEKYGIRFKDVRLLEEAFTHSSYVNENPGKTFGNYEKLEFLGDAVLEFTVSDYLYRHFQ 69
Query: 173 HLSPGEISDIRSAMVNNVTFASYAV 197
HL+ GE++ +RS +V F+ A+
Sbjct: 70 HLNEGELTRLRSNIVRTEGFSKVAL 94
>gi|238021755|ref|ZP_04602181.1| hypothetical protein GCWU000324_01658 [Kingella oralis ATCC 51147]
gi|237866369|gb|EEP67411.1| hypothetical protein GCWU000324_01658 [Kingella oralis ATCC 51147]
Length = 239
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 116 LEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSHLS 175
L+K++ YTF++ + L QAL+H +Y+A + +RLEF+GD+I+D+ + LY F L
Sbjct: 14 LQKQLGYTFKNPALLQQALTHRSYHAQ----NNERLEFIGDSILDYAIAKMLYHAFPKLP 69
Query: 176 PGEISDIRSAMVNNVTFASYAVRLDL 201
G +S +R+ +V T A A L +
Sbjct: 70 EGRLSPLRAQLVKEATLAEIARELHI 95
>gi|398814573|ref|ZP_10573254.1| ribonuclease III [Brevibacillus sp. BC25]
gi|398036842|gb|EJL30051.1| ribonuclease III [Brevibacillus sp. BC25]
Length = 233
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 56/87 (64%), Gaps = 5/87 (5%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTY----NANRITTSYQRLEFLGDAIIDFLVTAYLYE 169
QL++ I + F+D+S L QA +H +Y RI+ + +RLEFLGDA+++ V+ +LY+
Sbjct: 9 AQLQEMIGFRFRDESVLRQAFTHSSYVNEQRGKRISDN-ERLEFLGDAVLELTVSQFLYK 67
Query: 170 NFSHLSPGEISDIRSAMVNNVTFASYA 196
F +S GE++ +R+A+V + +A
Sbjct: 68 TFPKMSEGEMTKLRAAIVCEPSLVKFA 94
>gi|126667175|ref|ZP_01738149.1| ribonuclease III [Marinobacter sp. ELB17]
gi|126628331|gb|EAZ98954.1| ribonuclease III [Marinobacter sp. ELB17]
Length = 229
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/102 (33%), Positives = 56/102 (54%), Gaps = 4/102 (3%)
Query: 111 PECTQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYEN 170
P+ L++RI Y F+ + LL AL+H ++ + +RLEFLGD+I++ ++ +L+
Sbjct: 5 PDLEPLQRRIGYQFKSQERLLLALTHRSFG----NQNNERLEFLGDSIVNMVIAEHLFRR 60
Query: 171 FSHLSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
F G++S +R+ MV VT A DL +L S L
Sbjct: 61 FPKAREGQLSRLRARMVKGVTLAEIGREFDLGSYLRLGSGEL 102
>gi|374702564|ref|ZP_09709434.1| ribonuclease III [Pseudomonas sp. S9]
Length = 229
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Query: 114 TQLEKRINYTFQDKSFLLQALSHPTYNANRITTSYQRLEFLGDAIIDFLVTAYLYENFSH 173
+LE+++ YTF+D+ ++ AL+H ++ + +RLEFLGDAI++F+ L+E F
Sbjct: 6 ARLERKLGYTFKDQDHMVLALTHRSFAGR----NNERLEFLGDAILNFVAGEALFERFPQ 61
Query: 174 LSPGEISDIRSAMVNNVTFASYAVRLDLHKHLLHDSPRL 212
G++S +R+ +V T A A DL ++L S L
Sbjct: 62 AREGQLSRLRARLVKGETLAILARGFDLGEYLRLGSGEL 100
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.137 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,441,372,293
Number of Sequences: 23463169
Number of extensions: 184945201
Number of successful extensions: 1064792
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 4341
Number of HSP's successfully gapped in prelim test: 395
Number of HSP's that attempted gapping in prelim test: 1055340
Number of HSP's gapped (non-prelim): 7011
length of query: 286
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 145
effective length of database: 9,050,888,538
effective search space: 1312378838010
effective search space used: 1312378838010
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 76 (33.9 bits)