Query psy3981
Match_columns 276
No_of_seqs 482 out of 2181
Neff 9.2
Searched_HMMs 29240
Date Fri Aug 16 22:14:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3981.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3981hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 99.8 7.2E-21 2.4E-25 176.5 9.0 73 80-152 399-479 (510)
2 3vw7_A Proteinase-activated re 99.8 1.5E-18 5E-23 158.9 11.8 72 81-152 381-457 (484)
3 3odu_A C-X-C chemokine recepto 99.8 6.2E-19 2.1E-23 162.1 8.7 73 80-152 403-485 (502)
4 2rh1_A Beta-2-adrenergic recep 99.8 1.5E-18 5.1E-23 160.3 10.2 66 82-148 400-465 (500)
5 3uon_A Human M2 muscarinic ace 99.7 2.3E-18 8E-23 156.7 9.3 68 82-149 380-447 (467)
6 4dkl_A MU-type opioid receptor 99.7 1.5E-18 5.3E-23 157.7 5.8 72 79-150 372-446 (464)
7 3rze_A Histamine H1 receptor, 99.7 2.3E-18 7.9E-23 156.1 6.0 69 81-149 364-432 (452)
8 3v2y_A Sphingosine 1-phosphate 99.7 1.8E-17 6.2E-22 153.9 9.8 69 81-149 412-482 (520)
9 2z73_A Rhodopsin; visual pigme 99.7 1E-17 3.5E-22 152.3 7.5 145 5-150 177-322 (448)
10 3eml_A Human adenosine A2A rec 99.7 1.3E-17 4.4E-22 152.5 5.7 68 82-149 387-456 (488)
11 3pbl_A D(3) dopamine receptor, 99.7 4.3E-17 1.5E-21 149.0 7.2 69 81-149 392-461 (481)
12 4amj_A Beta-1 adrenergic recep 99.7 1.3E-17 4.5E-22 143.6 3.0 129 12-148 160-289 (315)
13 3sn6_R Lysozyme, beta-2 adrene 99.7 2.3E-16 7.8E-21 146.1 9.8 123 24-147 344-478 (514)
14 2ks9_A Substance-P receptor; w 99.6 5.5E-17 1.9E-21 143.2 4.9 135 6-150 172-312 (364)
15 1u19_A Rhodopsin; G protein-co 99.6 3.6E-17 1.2E-21 143.2 3.6 132 5-149 179-313 (349)
16 4eiy_A Adenosine receptor A2A/ 99.6 3.6E-17 1.2E-21 148.0 2.8 68 82-149 346-415 (447)
17 2lnl_A C-X-C chemokine recepto 99.6 2.7E-16 9.4E-21 135.1 7.1 105 24-150 170-284 (296)
18 4ea3_A Fusion protein of nocic 99.6 1E-15 3.6E-20 138.7 4.9 130 6-149 266-399 (434)
19 4grv_A Neurotensin receptor ty 99.6 2E-15 6.8E-20 139.9 5.3 97 156-252 31-156 (510)
20 2lnl_A C-X-C chemokine recepto 99.6 3.4E-15 1.2E-19 128.2 6.2 94 154-249 8-125 (296)
21 2rh1_A Beta-2-adrenergic recep 99.5 3.3E-15 1.1E-19 137.9 4.4 99 153-251 36-158 (500)
22 3vw7_A Proteinase-activated re 99.5 1E-14 3.5E-19 133.2 3.4 99 153-251 16-138 (484)
23 3uon_A Human M2 muscarinic ace 99.5 1.8E-14 6.1E-19 131.0 4.8 98 154-251 20-141 (467)
24 3rze_A Histamine H1 receptor, 99.5 9.9E-15 3.4E-19 132.1 2.9 97 156-252 7-127 (452)
25 4dkl_A MU-type opioid receptor 99.5 1.4E-14 4.8E-19 131.5 3.6 99 152-251 12-134 (464)
26 1u19_A Rhodopsin; G protein-co 99.5 3.5E-14 1.2E-18 124.1 5.1 96 154-250 35-154 (349)
27 4amj_A Beta-1 adrenergic recep 99.4 7.7E-15 2.6E-19 126.2 0.3 97 155-251 9-129 (315)
28 4ea3_A Fusion protein of nocic 99.4 4.8E-14 1.6E-18 127.7 3.9 99 152-251 120-242 (434)
29 2ks9_A Substance-P receptor; w 99.4 9.4E-14 3.2E-18 122.3 5.1 85 158-242 33-141 (364)
30 3v2y_A Sphingosine 1-phosphate 99.4 6.6E-14 2.3E-18 129.9 3.9 93 158-252 64-180 (520)
31 3sn6_R Lysozyme, beta-2 adrene 99.4 3.7E-14 1.3E-18 131.3 2.0 102 151-252 176-301 (514)
32 3odu_A C-X-C chemokine recepto 99.4 8.7E-14 3E-18 127.7 4.4 96 153-250 44-163 (502)
33 2z73_A Rhodopsin; visual pigme 99.4 1.8E-13 6E-18 124.3 4.9 100 152-251 29-153 (448)
34 3pbl_A D(3) dopamine receptor, 99.4 8.3E-14 2.8E-18 127.1 1.7 96 155-250 36-159 (481)
35 3eml_A Human adenosine A2A rec 99.4 2.5E-13 8.7E-18 123.9 4.5 95 156-252 20-138 (488)
36 4eiy_A Adenosine receptor A2A/ 99.3 1.6E-13 5.5E-18 123.9 1.8 95 156-252 30-148 (447)
37 2ki9_A Cannabinoid receptor 2; 98.5 8.7E-09 3E-13 58.2 -1.4 30 85-114 1-30 (33)
38 2koe_A Human cannabinoid recep 97.6 7.4E-06 2.5E-10 47.9 -0.7 26 124-149 2-27 (40)
39 2lot_A Apelin receptor; membra 96.0 0.0011 3.9E-08 42.5 0.1 31 159-189 30-60 (64)
40 1hll_A Alpha-2A adrenergic rec 83.0 0.14 4.7E-06 27.4 -1.0 17 233-249 15-32 (32)
41 2jx4_A Vasopressin V2 receptor 62.5 2.3 7.9E-05 25.7 0.8 14 48-61 2-15 (52)
42 2rdd_B UPF0092 membrane protei 44.8 28 0.00097 19.1 3.3 21 39-59 7-28 (37)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.83 E-value=7.2e-21 Score=176.50 Aligned_cols=73 Identities=19% Similarity=0.183 Sum_probs=61.8
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhchhHHHHHHHHHhcccc--------ccHHHHHHHHhhcccCccccccccccccCCCC
Q psy3981 80 SGTSAEIKLAKVALMTISLWFLAWTPYLVINFGGILEMVE--------INPLITIWGSVFAKANAVYNPIVYAIRYQYPP 151 (276)
Q Consensus 80 ~~~~~~~k~~k~l~~vv~~F~icw~Py~i~~l~~~~~~~~--------~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~~~ 151 (276)
+..++|+|++||+++|+++|++||+||++..++..+.+.. ...+++.++.||+|+|||+||+||++.+++..
T Consensus 399 ~~~~~erk~~k~L~iVv~~F~iCWlPf~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~Y~NS~iNPiIY~~~n~~FR 478 (510)
T 4grv_A 399 GSVQALRHGVLVARAVVIAFVVCWLPYHVRRLMFCYISDEQWTTFLFDFYHYFYMLTNALAYASSAINPILYNLVSANFR 478 (510)
T ss_dssp STTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHHH
Confidence 4456789999999999999999999999999998776543 22356678899999999999999999998875
Q ss_pred C
Q psy3981 152 M 152 (276)
Q Consensus 152 ~ 152 (276)
.
T Consensus 479 ~ 479 (510)
T 4grv_A 479 Q 479 (510)
T ss_dssp C
T ss_pred H
Confidence 4
No 2
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.77 E-value=1.5e-18 Score=158.89 Aligned_cols=72 Identities=7% Similarity=0.100 Sum_probs=59.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHhchhHHHHHHHHHhcccc-----ccHHHHHHHHhhcccCccccccccccccCCCCC
Q psy3981 81 GTSAEIKLAKVALMTISLWFLAWTPYLVINFGGILEMVE-----INPLITIWGSVFAKANAVYNPIVYAIRYQYPPM 152 (276)
Q Consensus 81 ~~~~~~k~~k~l~~vv~~F~icw~Py~i~~l~~~~~~~~-----~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~~~~ 152 (276)
+.++++|++||+++++++|++||+||+++.++..+.... ....++.++.+|+++||++||+||++.+++...
T Consensus 381 ~~~~~~r~~k~l~~v~~~F~icwlP~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~iNPiIY~~~~~~fR~ 457 (484)
T 3vw7_A 381 NRSKKSRALFLSAAVFCIFIICFGPTNVLLIAHYSFLSHTSTTEAAYFAYLLCVCVSSISCCIDPLIYYYASSECQR 457 (484)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTCTTCTTSHHHHHHHHHHHHHHTTHHHHHHHHHHHTSSCC--
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHhccccchhHHHHHHHHHHHHHHhccccchHHHHHhhHHHHH
Confidence 446778999999999999999999999999988654322 334567788999999999999999999987644
No 3
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.76 E-value=6.2e-19 Score=162.10 Aligned_cols=73 Identities=19% Similarity=0.180 Sum_probs=60.1
Q ss_pred CCchhHHHHHHHHHHHHHHHHHhchhHHHHHHHHHhccc----------cccHHHHHHHHhhcccCccccccccccccCC
Q psy3981 80 SGTSAEIKLAKVALMTISLWFLAWTPYLVINFGGILEMV----------EINPLITIWGSVFAKANAVYNPIVYAIRYQY 149 (276)
Q Consensus 80 ~~~~~~~k~~k~l~~vv~~F~icw~Py~i~~l~~~~~~~----------~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~ 149 (276)
.+.++++|++||+++++++|++||+||++..++..+... .....+..++.+|+++||++||+||++++++
T Consensus 403 ~~~~~~~k~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~ 482 (502)
T 3odu_A 403 SKGHQKRKALKTTVILILAFFACWLPYYIGISIDSFILLEIIKQGCEFENTVHKWISITEALAFFHCCLNPILYAFLGAK 482 (502)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSSCCCHHHHHHHHHHHHHHHHHHTTHHHHHHHHTTTTTCC
T ss_pred hhhHhHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHHhhhhccccccchHHHHHHHHHHHHHhcccchhhhhhcCHH
Confidence 345668999999999999999999999999988765411 1334566788999999999999999999987
Q ss_pred CCC
Q psy3981 150 PPM 152 (276)
Q Consensus 150 ~~~ 152 (276)
...
T Consensus 483 fR~ 485 (502)
T 3odu_A 483 FKT 485 (502)
T ss_dssp CCC
T ss_pred HHH
Confidence 654
No 4
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.76 E-value=1.5e-18 Score=160.33 Aligned_cols=66 Identities=20% Similarity=0.336 Sum_probs=59.8
Q ss_pred chhHHHHHHHHHHHHHHHHHhchhHHHHHHHHHhccccccHHHHHHHHhhcccCccccccccccccC
Q psy3981 82 TSAEIKLAKVALMTISLWFLAWTPYLVINFGGILEMVEINPLITIWGSVFAKANAVYNPIVYAIRYQ 148 (276)
Q Consensus 82 ~~~~~k~~k~l~~vv~~F~icw~Py~i~~l~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~ 148 (276)
.++|+|++||+++++++|++||+||++..++..+.+...+..++.+..||+++||++||+||++ ++
T Consensus 400 ~~~e~ka~ktl~ivv~~F~icWlP~~i~~l~~~~~~~~~~~~~~~~~~~L~y~NS~iNPiIY~~-n~ 465 (500)
T 2rh1_A 400 CLKEHKALKTLGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYCR-SP 465 (500)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHGGGTHHHHGGG-SH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccHHHHHHHHHHHHHHHhhcchhhhc-cH
Confidence 3578999999999999999999999999999988766678889999999999999999999985 54
No 5
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.75 E-value=2.3e-18 Score=156.71 Aligned_cols=68 Identities=22% Similarity=0.318 Sum_probs=62.2
Q ss_pred chhHHHHHHHHHHHHHHHHHhchhHHHHHHHHHhccccccHHHHHHHHhhcccCccccccccccccCC
Q psy3981 82 TSAEIKLAKVALMTISLWFLAWTPYLVINFGGILEMVEINPLITIWGSVFAKANAVYNPIVYAIRYQY 149 (276)
Q Consensus 82 ~~~~~k~~k~l~~vv~~F~icw~Py~i~~l~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~ 149 (276)
.++|+|++||+++++++|++||+||++..++..+.+...+..+..++.+|+++||++||+||++++++
T Consensus 380 ~~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~i~~~L~~~ns~~NPiIY~~~~~~ 447 (467)
T 3uon_A 380 PSREKKVTRTILAILLAFIITWAPYNVMVLINTFCAPCIPNTVWTIGYWLCYINSTINPACYALCNAT 447 (467)
T ss_dssp CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTSCHHHHHHHHHHHHHTTTHHHHHHHHHCHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhcccchHHHHHHHHHHHHhhhhhhHHHHHcCHH
Confidence 45788999999999999999999999999999888777788899999999999999999999988764
No 6
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.73 E-value=1.5e-18 Score=157.66 Aligned_cols=72 Identities=14% Similarity=0.286 Sum_probs=60.5
Q ss_pred CCCchhHHHHHHHHHHHHHHHHHhchhHHHHHHHHHhcccc---ccHHHHHHHHhhcccCccccccccccccCCC
Q psy3981 79 QSGTSAEIKLAKVALMTISLWFLAWTPYLVINFGGILEMVE---INPLITIWGSVFAKANAVYNPIVYAIRYQYP 150 (276)
Q Consensus 79 ~~~~~~~~k~~k~l~~vv~~F~icw~Py~i~~l~~~~~~~~---~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~~ 150 (276)
.++.++++|++||+++++++|++||+||++..++..+.... .......++.+|+++||++||+||++++++.
T Consensus 372 ~~~~~~~~r~~k~l~~v~~~F~icw~P~~i~~l~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~f 446 (464)
T 4dkl_A 372 YEKDRNLRRITRMVLVVVAVFIVCWTPIHIYVIIKALITIPETTFQTVSWHFCIALGYTNSCLNPVLYAFLDENF 446 (464)
T ss_dssp TSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHhcCCccccchhHHHHHHHHHHhhhchhHHHHHHhhHHH
Confidence 34567889999999999999999999999999998775432 3455667888999999999999999988653
No 7
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.73 E-value=2.3e-18 Score=156.13 Aligned_cols=69 Identities=19% Similarity=0.304 Sum_probs=61.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHhchhHHHHHHHHHhccccccHHHHHHHHhhcccCccccccccccccCC
Q psy3981 81 GTSAEIKLAKVALMTISLWFLAWTPYLVINFGGILEMVEINPLITIWGSVFAKANAVYNPIVYAIRYQY 149 (276)
Q Consensus 81 ~~~~~~k~~k~l~~vv~~F~icw~Py~i~~l~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~ 149 (276)
+.++++|++||+++++++|++||+||++..++..+.+......+..++.+|+++||++||+||++++++
T Consensus 364 ~~~~~~k~~k~l~~vv~~f~icwlP~~i~~l~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~ 432 (452)
T 3rze_A 364 HMNRERKAAKQLGFIMAAFILCWIPYFIFFMVIAFCKNCCNEHLHMFTIWLGYINSTLNPLIYPLCNEN 432 (452)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCSCTTTHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhcccccHHHHHHHHHHHHHHhcccchhhhhccHH
Confidence 456889999999999999999999999999999887766677778889999999999999999988754
No 8
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.71 E-value=1.8e-17 Score=153.91 Aligned_cols=69 Identities=20% Similarity=0.336 Sum_probs=57.0
Q ss_pred CchhHHHHHHHHHHHHHHHHHhchhHHHHHHHHHhcccc--ccHHHHHHHHhhcccCccccccccccccCC
Q psy3981 81 GTSAEIKLAKVALMTISLWFLAWTPYLVINFGGILEMVE--INPLITIWGSVFAKANAVYNPIVYAIRYQY 149 (276)
Q Consensus 81 ~~~~~~k~~k~l~~vv~~F~icw~Py~i~~l~~~~~~~~--~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~ 149 (276)
+.++++|++||+++++++|++||+||++..++..+.... .......++.+++++|||+||+||++.+++
T Consensus 412 ~~~~~~k~~~~~~~vv~~F~vcw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~ 482 (520)
T 3v2y_A 412 RSSENVALLKTVIIVLSVFIACWAPLFILLLLDVGCKVKTCDILFRAEYFLVLAVLNSGTNPIIYTLTNKE 482 (520)
T ss_dssp STTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTTCSTTTSCHHHHHHHHHGGGTHHHHHHHHCHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHHHHHHHHHcCHH
Confidence 345689999999999999999999999999998776532 233445567789999999999999988864
No 9
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.71 E-value=1e-17 Score=152.28 Aligned_cols=145 Identities=34% Similarity=0.654 Sum_probs=109.6
Q ss_pred EEecCCceeeeecccCCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhcccccccCCCCCchh
Q psy3981 5 YVPEGNLTACGTDYLTKDWHHRSYLIFYGFFVYFVPLILIIYAYYFIVRAVSVHEKQMREQAKKMNVATLRSGDQSGTSA 84 (276)
Q Consensus 5 ~~~~~~~~~C~~~~~~~~~~~~~y~i~~~~~~f~iPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (276)
+..++....|..++..++.....|.....++.+++|+++|+++|.+|.+.++|+.++.++..++.+....+ +..+..++
T Consensus 177 ~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~~ 255 (448)
T 2z73_A 177 YTLEGVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMAAMAKRLNAKELR-KAQAGANA 255 (448)
T ss_dssp EEECTTSSSEEECCSCCSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHHHHHTTTCCTTHH-HHHHHHHH
T ss_pred eeecCCceeEecccccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhHHHH-hhhccccH
Confidence 34455567898887665544566777778888999999999999999999999888776544322211111 11122346
Q ss_pred HHHHHHHHHHHHHHHHHhchhHHHHHHHHHhcccc-ccHHHHHHHHhhcccCccccccccccccCCC
Q psy3981 85 EIKLAKVALMTISLWFLAWTPYLVINFGGILEMVE-INPLITIWGSVFAKANAVYNPIVYAIRYQYP 150 (276)
Q Consensus 85 ~~k~~k~l~~vv~~F~icw~Py~i~~l~~~~~~~~-~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~~ 150 (276)
++|++|++++++++|++||+|+++..++..+.... .......+..+++++||++||+||++.+++.
T Consensus 256 ~~k~~~~l~~iv~~F~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~f 322 (448)
T 2z73_A 256 EMRLAKISIVIVSQFLLSWSPYAVVALLAQFGPLEWVTPYAAQLPVMFAKASAIHNPMIYSVSHPKF 322 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGCCHHHHHHHHHHHHHGGGSHHHHHHHHCHHH
T ss_pred HHHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCcccCChHHHHHHHHHHHHHHhhcchHHHHhhHHH
Confidence 88999999999999999999999999988776433 4566777888999999999999999887643
No 10
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.69 E-value=1.3e-17 Score=152.54 Aligned_cols=68 Identities=25% Similarity=0.379 Sum_probs=60.4
Q ss_pred chhHHHHHHHHHHHHHHHHHhchhHHHHHHHHHhccc--cccHHHHHHHHhhcccCccccccccccccCC
Q psy3981 82 TSAEIKLAKVALMTISLWFLAWTPYLVINFGGILEMV--EINPLITIWGSVFAKANAVYNPIVYAIRYQY 149 (276)
Q Consensus 82 ~~~~~k~~k~l~~vv~~F~icw~Py~i~~l~~~~~~~--~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~ 149 (276)
.++++|++||+++++++|++||+||+++.++..+... .....+..++.+++++||++||+||++.+++
T Consensus 387 ~~~~~r~~~~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~ 456 (488)
T 3eml_A 387 LQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIRE 456 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHhccCccccccHHHHHHHHHHHHHHhhhchhhhhhcCHH
Confidence 3578899999999999999999999999999887654 4667788899999999999999999988754
No 11
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.67 E-value=4.3e-17 Score=148.98 Aligned_cols=69 Identities=13% Similarity=0.269 Sum_probs=60.8
Q ss_pred CchhHHHHHHHHHHHHHHHHHhchhHHHHHHHHHhccc-cccHHHHHHHHhhcccCccccccccccccCC
Q psy3981 81 GTSAEIKLAKVALMTISLWFLAWTPYLVINFGGILEMV-EINPLITIWGSVFAKANAVYNPIVYAIRYQY 149 (276)
Q Consensus 81 ~~~~~~k~~k~l~~vv~~F~icw~Py~i~~l~~~~~~~-~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~ 149 (276)
..++++|++||+++++++|++||+||++..++..+.+. .....++.++.+|+++||++||+||++++++
T Consensus 392 ~~~~~~k~~k~l~~iv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~L~~~ns~~NPiIY~~~~~~ 461 (481)
T 3pbl_A 392 VPLREKKATQMVAIVLGAFIVCWLPFFLTHVLNTHCQTCHVSPELYSATTWLGYVNSALNPVIYTTFNIE 461 (481)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred ccchhhhHHHHHHHHHHHHHHHhhHHHHHHHHHhccccccCcHHHHHHHHHHHHHhhccchHHHHHcCHH
Confidence 34578999999999999999999999999999877654 4677888899999999999999999988754
No 12
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.67 E-value=1.3e-17 Score=143.63 Aligned_cols=129 Identities=19% Similarity=0.344 Sum_probs=96.4
Q ss_pred eeeeecccCC-CcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhcccccccCCCCCchhHHHHHH
Q psy3981 12 TACGTDYLTK-DWHHRSYLIFYGFFVYFVPLILIIYAYYFIVRAVSVHEKQMREQAKKMNVATLRSGDQSGTSAEIKLAK 90 (276)
Q Consensus 12 ~~C~~~~~~~-~~~~~~y~i~~~~~~f~iPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k 90 (276)
..|..++... ......|.....++.+++|++++.++|.+|.+.++++.++.++.++ ++++++..++++|++|
T Consensus 160 ~~c~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~k~~~ 232 (315)
T 4amj_A 160 LKCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKIDRASK-------RKTSRVMLMREHKALK 232 (315)
T ss_dssp HHHHHCTTCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC-------------------CHHHHHHHHHHHH
T ss_pred cccccccccchhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcccc-------cccchhhhhhhhhHHH
Confidence 4566555432 2345678888888889999999999999999999987665442211 1111223357889999
Q ss_pred HHHHHHHHHHHhchhHHHHHHHHHhccccccHHHHHHHHhhcccCccccccccccccC
Q psy3981 91 VALMTISLWFLAWTPYLVINFGGILEMVEINPLITIWGSVFAKANAVYNPIVYAIRYQ 148 (276)
Q Consensus 91 ~l~~vv~~F~icw~Py~i~~l~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~ 148 (276)
++.+++++|++||+|+++..++..++....++....+..+++++||++||+||+ .++
T Consensus 233 ~~~~~~~~f~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nPiiY~-~~~ 289 (315)
T 4amj_A 233 TLGIIMGVFTLCWLPFFLVNIVNVFNRDLVPDWLFVAFNWLGYANSAMNPIIYC-RSP 289 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCTTSSCHHHHHHHHHHHHHGGGTHHHHGG-GSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCccchHHHHHHHHHHHHHhccccHHHHc-CcH
Confidence 999999999999999999999988877667788888889999999999999998 654
No 13
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.65 E-value=2.3e-16 Score=146.14 Aligned_cols=123 Identities=17% Similarity=0.360 Sum_probs=95.5
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhcc------------cccccCCCCCchhHHHHHHH
Q psy3981 24 HHRSYLIFYGFFVYFVPLILIIYAYYFIVRAVSVHEKQMREQAKKMNV------------ATLRSGDQSGTSAEIKLAKV 91 (276)
Q Consensus 24 ~~~~y~i~~~~~~f~iPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~------------~~~~~~~~~~~~~~~k~~k~ 91 (276)
....|.+...++.|++|+++|+++|.+|++.+|++.++.++....... ....++..+..++++|++|+
T Consensus 344 ~~~~y~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 423 (514)
T 3sn6_R 344 TNQAYAIASSIVSFYVPLVIMVFVYSRVFQEAKRQLQKIDKSEGRFHVQNLSQVEQDGRTGHGLRRSSKFCLKEHKALKT 423 (514)
T ss_dssp CCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-------------------------CHHHHHHHHH
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccccccccccccccccccccccccccccchhhhhHHHHHHHHH
Confidence 356788888899999999999999999999999988776543322100 00111223344678999999
Q ss_pred HHHHHHHHHHhchhHHHHHHHHHhccccccHHHHHHHHhhcccCcccccccccccc
Q psy3981 92 ALMTISLWFLAWTPYLVINFGGILEMVEINPLITIWGSVFAKANAVYNPIVYAIRY 147 (276)
Q Consensus 92 l~~vv~~F~icw~Py~i~~l~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~ 147 (276)
+++++++|++||+|+++..++..+........+..++.+++++||++||+||+ ++
T Consensus 424 l~~iv~~F~lcwlP~~i~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~-~~ 478 (514)
T 3sn6_R 424 LGIIMGTFTLCWLPFFIVNIVHVIQDNLIRKEVYILLNWIGYVNSGFNPLIYC-RS 478 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSTTSSCHHHHHHHHHHHHHHHHHHHHHHT-TC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccchHHHHHHHHHHHHHHhhhHHhhc-CC
Confidence 99999999999999999999988876667788888999999999999999997 54
No 14
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.65 E-value=5.5e-17 Score=143.18 Aligned_cols=135 Identities=18% Similarity=0.280 Sum_probs=101.9
Q ss_pred EecCCceeeeecccCCC--cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhcccccccCCCCCch
Q psy3981 6 VPEGNLTACGTDYLTKD--WHHRSYLIFYGFFVYFVPLILIIYAYYFIVRAVSVHEKQMREQAKKMNVATLRSGDQSGTS 83 (276)
Q Consensus 6 ~~~~~~~~C~~~~~~~~--~~~~~y~i~~~~~~f~iPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (276)
.++++...|..+|+.+. .....|.+...++.+++|++++.++|.+|.+.+++++++. ...++.+++.+
T Consensus 172 ~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~~~~~----------~~~~~~~~~~~ 241 (364)
T 2ks9_A 172 ETMPSRVVCMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPG----------DSSDRYHEQVS 241 (364)
T ss_dssp CBCTTCSSBCCCCSCCCTTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCSCCCSS----------SSSSCSSHHHH
T ss_pred eecCCCCEEeecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC----------CcchhhhhhHH
Confidence 34455667988886532 2345788888888999999999999999999998643211 01111223456
Q ss_pred hHHHHHHHHHHHHHHHHHhchhHHHHHHHHHhcccc----ccHHHHHHHHhhcccCccccccccccccCCC
Q psy3981 84 AEIKLAKVALMTISLWFLAWTPYLVINFGGILEMVE----INPLITIWGSVFAKANAVYNPIVYAIRYQYP 150 (276)
Q Consensus 84 ~~~k~~k~l~~vv~~F~icw~Py~i~~l~~~~~~~~----~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~~ 150 (276)
+++|++|++++++++|++||+|+++..++..+.... ....++.+..+++++||++||+||++.+++.
T Consensus 242 ~~~k~~~~~~~v~~~f~~~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiiY~~~~~~f 312 (364)
T 2ks9_A 242 AKRKVVKMMIVVVCTFAICWLPFHIFFLLPYINPDLYLKKFIQQVYLAIMWLAMSSTMYNPIIYCCLNDRF 312 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTSCSSSCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHH
Confidence 788999999999999999999999999888765432 3456777888999999999999999887543
No 15
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.65 E-value=3.6e-17 Score=143.19 Aligned_cols=132 Identities=27% Similarity=0.568 Sum_probs=102.2
Q ss_pred EEecCCceeeeecccCC--CcccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhcccccccCCCCCc
Q psy3981 5 YVPEGNLTACGTDYLTK--DWHHRSYLIFYGFFVYFVPLILIIYAYYFIVRAVSVHEKQMREQAKKMNVATLRSGDQSGT 82 (276)
Q Consensus 5 ~~~~~~~~~C~~~~~~~--~~~~~~y~i~~~~~~f~iPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (276)
+.+++....|..++..+ +.....|.....++.+++|++++.++|.+|.+.+||+.++. ++.+++.
T Consensus 179 ~~~~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~-------------~~~~~~~ 245 (349)
T 1u19_A 179 YIPEGMQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQ-------------QESATTQ 245 (349)
T ss_dssp CEEETTTTEEECCCSCCCGGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCSS-------------CSSSHHH
T ss_pred eeccCCceeecccccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhh-------------ccchhhH
Confidence 34455567898887543 22356788888888899999999999999999998754321 1112334
Q ss_pred hhHHHHHHHHHHHHHHHHHhchhHHHHHHHHHhccc-cccHHHHHHHHhhcccCccccccccccccCC
Q psy3981 83 SAEIKLAKVALMTISLWFLAWTPYLVINFGGILEMV-EINPLITIWGSVFAKANAVYNPIVYAIRYQY 149 (276)
Q Consensus 83 ~~~~k~~k~l~~vv~~F~icw~Py~i~~l~~~~~~~-~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~ 149 (276)
++++|++|++.+++++|++||+|+++..++..+... ........++.+++++||++||+||++.+++
T Consensus 246 ~~~~~~~~~~~~i~~~f~i~~~P~~i~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~nPiiY~~~~~~ 313 (349)
T 1u19_A 246 KAEKEVTRMVIIMVIAFLICWLPYAGVAFYIFTHQGSDFGPIFMTIPAFFAKTSAVYNPVIYIMMNKQ 313 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSCCCHHHHHHHHHHGGGGGTHHHHHHHHTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhHhheecCCcccchHHHHHHHHHHHHHHHHhHHHHHHHhHH
Confidence 678899999999999999999999999888766543 3566777888999999999999999988754
No 16
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.64 E-value=3.6e-17 Score=148.02 Aligned_cols=68 Identities=25% Similarity=0.379 Sum_probs=59.7
Q ss_pred chhHHHHHHHHHHHHHHHHHhchhHHHHHHHHHhccc--cccHHHHHHHHhhcccCccccccccccccCC
Q psy3981 82 TSAEIKLAKVALMTISLWFLAWTPYLVINFGGILEMV--EINPLITIWGSVFAKANAVYNPIVYAIRYQY 149 (276)
Q Consensus 82 ~~~~~k~~k~l~~vv~~F~icw~Py~i~~l~~~~~~~--~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~ 149 (276)
.++++|++||+++++++|++||+||++..++..+.+. .....+..++.+++++||++||+||++.+++
T Consensus 346 ~~~~~r~~k~l~~vv~~F~icw~P~~i~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~ 415 (447)
T 4eiy_A 346 LQKEVHAAKSLAIIVGLFALCWLPLHIINCFTFFCPDCSHAPLWLMYLAIVLSHTNSVVNPFIYAYRIRE 415 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HHHHHHHHHHHHHhhhhhheeccHHHHHHHHHHhcCcccccchHHHHHHHHHHHHHhccchhhhHhccHH
Confidence 3578899999999999999999999999998877653 3667788899999999999999999988754
No 17
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.63 E-value=2.7e-16 Score=135.05 Aligned_cols=105 Identities=19% Similarity=0.345 Sum_probs=86.1
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhcccccccCCCCCchhHHHHHHHHHHHHHHHHHhc
Q psy3981 24 HHRSYLIFYGFFVYFVPLILIIYAYYFIVRAVSVHEKQMREQAKKMNVATLRSGDQSGTSAEIKLAKVALMTISLWFLAW 103 (276)
Q Consensus 24 ~~~~y~i~~~~~~f~iPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~k~l~~vv~~F~icw 103 (276)
....|.+....+.+++|+.++.++|.++.+.+++ ++.++|+|++|++.+++++|++||
T Consensus 170 ~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~~----------------------~~~~~~~k~~~~~~~v~~~f~icw 227 (296)
T 2lnl_A 170 WRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFK----------------------AHMGQKHRAMRVIFAVVLIFLLCW 227 (296)
T ss_dssp TTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSSS----------------------CCCHHHHTHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH----------------------HhhhhhhhHHHHHHHhhhheeeee
Confidence 3566788888899999999999999988766542 234678899999999999999999
Q ss_pred hhHHHHHHHHHhccccc----------cHHHHHHHHhhcccCccccccccccccCCC
Q psy3981 104 TPYLVINFGGILEMVEI----------NPLITIWGSVFAKANAVYNPIVYAIRYQYP 150 (276)
Q Consensus 104 ~Py~i~~l~~~~~~~~~----------~~~~~~~~~~l~~~ns~~NPiIY~~~~~~~ 150 (276)
+||++..++..+..... ......++.+++++||++||+||++.+++.
T Consensus 228 ~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~~NPiIY~~~~~~f 284 (296)
T 2lnl_A 228 LPYNLVLLADTLMRTQVIQESCERRNNIGRALDATEILGFLHSCLNPIIYAFIGQNF 284 (296)
T ss_dssp HHHHHHHHHHHHTCSSSCSCHHHHHHHTTHHHHHHHHHGGGGGTHHHHHHHHHCSHH
T ss_pred hHHHHHHHHHHHhccccCCcchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCHHH
Confidence 99999999887654331 124567888999999999999999998754
No 18
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.57 E-value=1e-15 Score=138.69 Aligned_cols=130 Identities=19% Similarity=0.337 Sum_probs=98.5
Q ss_pred EecCCceeeeecccCCC-cccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHhhhcccccccCCCCCchh
Q psy3981 6 VPEGNLTACGTDYLTKD-WHHRSYLIFYGFFVYFVPLILIIYAYYFIVRAVSVHEKQMREQAKKMNVATLRSGDQSGTSA 84 (276)
Q Consensus 6 ~~~~~~~~C~~~~~~~~-~~~~~y~i~~~~~~f~iPl~ii~~~Y~~I~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (276)
..+++...|..++...+ .....|.+...++.+++|+++++++|.+|.+.+++++++ .+.+++.++
T Consensus 266 ~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~--------------~~~~~~~~~ 331 (434)
T 4ea3_A 266 QVEDEEIECLVEIPTPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLL--------------SGSREKDRN 331 (434)
T ss_dssp CCCSSCCCEEECCCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCSSC--------------SSCHHHHHH
T ss_pred EeecCceeEEEecCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccc--------------ccchhhHHH
Confidence 34455667887775533 234567788888899999999999999999999864321 111223466
Q ss_pred HHHHHHHHHHHHHHHHHhchhHHHHHHHHHhcccccc---HHHHHHHHhhcccCccccccccccccCC
Q psy3981 85 EIKLAKVALMTISLWFLAWTPYLVINFGGILEMVEIN---PLITIWGSVFAKANAVYNPIVYAIRYQY 149 (276)
Q Consensus 85 ~~k~~k~l~~vv~~F~icw~Py~i~~l~~~~~~~~~~---~~~~~~~~~l~~~ns~~NPiIY~~~~~~ 149 (276)
++|++|++++++++|++||+|+.+..++..+...... .....++.+++++||++||+||++++++
T Consensus 332 ~~~~~~~~~~vv~~F~i~w~P~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ns~lNPiIY~~~~~~ 399 (434)
T 4ea3_A 332 LRRITRLVLVVVAVFVGCWTPVQVFVLAQGLGVQPSSETAVAILRFCTALGYVNSCLNPILYAFLDEN 399 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHH
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999998876543322 2455667789999999999999988764
No 19
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=99.55 E-value=2e-15 Score=139.87 Aligned_cols=97 Identities=20% Similarity=0.362 Sum_probs=84.2
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhhhccCC---CCChhHHHHHHHHHHHHHHHhhhhhhHHHHhhc--cccccccccc
Q psy3981 156 WYQALGLTMICLGTMSMVGNGIVVYIFLCTKN---LRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFY--ETWTLGPFMC 230 (276)
Q Consensus 156 ~~~~l~~~~~~~~~~~~~~n~~vi~~~~~~~~---~~~~~~~~l~nLa~~Dl~~~~~~~p~~~~~~~~--~~w~~g~~~C 230 (276)
.+.++.++|.+++++|++||+++++++.++|+ +|+++|+|++|||++|+++++..+|+.+...+. +.|.+|+.+|
T Consensus 31 ~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~~~~~~w~~g~~~C 110 (510)
T 4grv_A 31 SKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFIWVHHPWAFGDAGC 110 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTCCSSCSSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCEEhhHHHH
Confidence 35567788999999999999999999988765 458999999999999999999999999988764 5699999999
Q ss_pred ee-----------------------eeeecCc-cccccccccceEE
Q psy3981 231 EL-----------------------YGMLGHP-KFRQALDKKFPSL 252 (276)
Q Consensus 231 ~~-----------------------y~aI~~P-~~~~~~~~~~~~~ 252 (276)
++ |.||++| +|+..++++++..
T Consensus 111 ~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~ 156 (510)
T 4grv_A 111 RGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKK 156 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccce
Confidence 98 8899999 9999999987743
No 20
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.55 E-value=3.4e-15 Score=128.20 Aligned_cols=94 Identities=19% Similarity=0.414 Sum_probs=80.5
Q ss_pred CchhhHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCChhHHHHHHHHHHHHHHHhhhhhhHHHHhhcccccccccccee-
Q psy3981 154 PLWYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGPFMCEL- 232 (276)
Q Consensus 154 ~~~~~~l~~~~~~~~~~~~~~n~~vi~~~~~~~~~~~~~~~~l~nLa~~Dl~~~~~~~p~~~~~~~~~~w~~g~~~C~~- 232 (276)
...+.++.+.|.+++++|++||+++++++.++|++|+++|+|+.|||++|+++++.. |....... ++|..|+..|+.
T Consensus 8 ~~~~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l~~-p~~~~~~~-~~~~~~~~~c~~~ 85 (296)
T 2lnl_A 8 TLNKYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALTL-PIWAASKV-NGWIFGTFLCKVV 85 (296)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHHHH-HHHHHHHH-SSSCCSSHHHHHH
T ss_pred chhHHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHhh-hHHHhhcc-CCCccchhHHHHH
Confidence 344677888899999999999999999999999999999999999999999998765 66665554 569999999998
Q ss_pred ----------------------eeeecCc-cccccccccc
Q psy3981 233 ----------------------YGMLGHP-KFRQALDKKF 249 (276)
Q Consensus 233 ----------------------y~aI~~P-~~~~~~~~~~ 249 (276)
|.||+|| +|+..++++.
T Consensus 86 ~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~~~~~ 125 (296)
T 2lnl_A 86 SLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQKRHLV 125 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSSSCCHHHHH
T ss_pred hhhhhhhHHHHHHHHHHHHhhhhhhhhhccccchhhhhhh
Confidence 8899999 8877666543
No 21
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.53 E-value=3.3e-15 Score=137.88 Aligned_cols=99 Identities=25% Similarity=0.491 Sum_probs=91.0
Q ss_pred CCchhhHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCChhHHHHHHHHHHHHHHHhhhhhhHHHHhhcccccccccccee
Q psy3981 153 HPLWYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGPFMCEL 232 (276)
Q Consensus 153 ~~~~~~~l~~~~~~~~~~~~~~n~~vi~~~~~~~~~~~~~~~~l~nLa~~Dl~~~~~~~p~~~~~~~~~~w~~g~~~C~~ 232 (276)
...+..++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|+++++..+|..+...+.+.|.+|+.+|++
T Consensus 36 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~~~~w~~~~~~C~~ 115 (500)
T 2rh1_A 36 DEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILMKMWTFGNFWCEF 115 (500)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCCSHHHHHHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcCCcchhhH
Confidence 45566778889999999999999999999999999999999999999999999999999999999999999999999997
Q ss_pred -----------------------eeeecCc-cccccccccceE
Q psy3981 233 -----------------------YGMLGHP-KFRQALDKKFPS 251 (276)
Q Consensus 233 -----------------------y~aI~~P-~~~~~~~~~~~~ 251 (276)
|.||+|| +|.+.++++++.
T Consensus 116 ~~~~~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~ 158 (500)
T 2rh1_A 116 WTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKAR 158 (500)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHeeccCcCCeeeccccee
Confidence 8899999 999888887653
No 22
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.48 E-value=1e-14 Score=133.24 Aligned_cols=99 Identities=12% Similarity=0.156 Sum_probs=82.0
Q ss_pred CCchhhHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCChhHHHHHHHHHHHHHHHhhhhhhHHHHhhcccccccccccee
Q psy3981 153 HPLWYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGPFMCEL 232 (276)
Q Consensus 153 ~~~~~~~l~~~~~~~~~~~~~~n~~vi~~~~~~~~~~~~~~~~l~nLa~~Dl~~~~~~~p~~~~~~~~~~w~~g~~~C~~ 232 (276)
.+....++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|+++++...|..+.....++|.+|+.+|++
T Consensus 16 ~~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~~~~~~~~~~~~~~~~~~~~~C~~ 95 (484)
T 3vw7_A 16 SSWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSVLPFKISYYFSGSDWQFGSELCRF 95 (484)
T ss_dssp CHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTTHHHHHHHHHTTSCCCSCHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccchhHHhH
Confidence 45566778889999999999999999999999999999999999999999999988765555556666689999999998
Q ss_pred -----------------------eeeecCc-cccccccccceE
Q psy3981 233 -----------------------YGMLGHP-KFRQALDKKFPS 251 (276)
Q Consensus 233 -----------------------y~aI~~P-~~~~~~~~~~~~ 251 (276)
|.||++| +|...++++++.
T Consensus 96 ~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~ 138 (484)
T 3vw7_A 96 VTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRAS 138 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccchhHHH
Confidence 8899999 998888887654
No 23
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.47 E-value=1.8e-14 Score=130.96 Aligned_cols=98 Identities=21% Similarity=0.355 Sum_probs=90.1
Q ss_pred CchhhHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCChhHHHHHHHHHHHHHHHhhhhhhHHHHhhcccccccccccee-
Q psy3981 154 PLWYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGPFMCEL- 232 (276)
Q Consensus 154 ~~~~~~l~~~~~~~~~~~~~~n~~vi~~~~~~~~~~~~~~~~l~nLa~~Dl~~~~~~~p~~~~~~~~~~w~~g~~~C~~- 232 (276)
.....++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.++..+|..+.....+.|.+|+..|++
T Consensus 20 ~~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~ 99 (467)
T 3uon_A 20 TFEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTVIGYWPLGPVVCDLW 99 (467)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCCSCHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccCCcchHhHH
Confidence 3445677888999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ----------------------eeeecCc-cccccccccceE
Q psy3981 233 ----------------------YGMLGHP-KFRQALDKKFPS 251 (276)
Q Consensus 233 ----------------------y~aI~~P-~~~~~~~~~~~~ 251 (276)
|.||+|| +|...++++++.
T Consensus 100 ~~~~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~ 141 (467)
T 3uon_A 100 LALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAG 141 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHH
Confidence 8899999 999888887654
No 24
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.47 E-value=9.9e-15 Score=132.11 Aligned_cols=97 Identities=21% Similarity=0.360 Sum_probs=88.0
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCChhHHHHHHHHHHHHHHHhhhhhhHHHHhhcccccccccccee---
Q psy3981 156 WYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGPFMCEL--- 232 (276)
Q Consensus 156 ~~~~l~~~~~~~~~~~~~~n~~vi~~~~~~~~~~~~~~~~l~nLa~~Dl~~~~~~~p~~~~~~~~~~w~~g~~~C~~--- 232 (276)
...++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.++..+|..+.....++|.+|+.+|++
T Consensus 7 ~~~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~ 86 (452)
T 3rze_A 7 QLMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLLMSKWSLGRPLCLFWLS 86 (452)
T ss_dssp --CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHHSSSCSSHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccCCchhHhHHHH
Confidence 34556678899999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred --------------------eeeecCc-cccccccccceEE
Q psy3981 233 --------------------YGMLGHP-KFRQALDKKFPSL 252 (276)
Q Consensus 233 --------------------y~aI~~P-~~~~~~~~~~~~~ 252 (276)
|.+|++| +|...++++++..
T Consensus 87 ~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~ 127 (452)
T 3rze_A 87 MDYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASA 127 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHheeCccccccccchhHHHH
Confidence 8899999 9999888876543
No 25
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.47 E-value=1.4e-14 Score=131.46 Aligned_cols=99 Identities=21% Similarity=0.360 Sum_probs=88.8
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCChhHHHHHHHHHHHHHHHhhhhhhHHHHhhccccccccccce
Q psy3981 152 MHPLWYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGPFMCE 231 (276)
Q Consensus 152 ~~~~~~~~l~~~~~~~~~~~~~~n~~vi~~~~~~~~~~~~~~~~l~nLa~~Dl~~~~~~~p~~~~~~~~~~w~~g~~~C~ 231 (276)
.......++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|+++++. +|..+.....++|.+|+.+|+
T Consensus 12 ~~~~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~~~~~~~~~~~C~ 90 (464)
T 4dkl_A 12 PSMVTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYLMGTWPFGNILCK 90 (464)
T ss_dssp --CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHSSCCSCSHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhCCcccccchhh
Confidence 3445567788899999999999999999999999999999999999999999999988 799999999999999999999
Q ss_pred e-----------------------eeeecCc-cccccccccceE
Q psy3981 232 L-----------------------YGMLGHP-KFRQALDKKFPS 251 (276)
Q Consensus 232 ~-----------------------y~aI~~P-~~~~~~~~~~~~ 251 (276)
+ |.||++| +|...++++++.
T Consensus 91 ~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~ 134 (464)
T 4dkl_A 91 IVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAK 134 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccHhH
Confidence 8 8899999 998888887654
No 26
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.46 E-value=3.5e-14 Score=124.09 Aligned_cols=96 Identities=26% Similarity=0.428 Sum_probs=85.9
Q ss_pred CchhhHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCChhHHHHHHHHHHHHHHHhhhhhhHHHHhhcccccccccccee-
Q psy3981 154 PLWYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGPFMCEL- 232 (276)
Q Consensus 154 ~~~~~~l~~~~~~~~~~~~~~n~~vi~~~~~~~~~~~~~~~~l~nLa~~Dl~~~~~~~p~~~~~~~~~~w~~g~~~C~~- 232 (276)
+....++.+++.+++++|++||.++++++.+++++|+++|++++|||++|++.++..+|..+.....++|.+|+..|++
T Consensus 35 ~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~~~~~~~~~~~C~~~ 114 (349)
T 1u19_A 35 PWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSLHGYFVFGPTGCNLE 114 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHTSCTTHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHhcCeeeCChhHHHHH
Confidence 3445677788899999999999999999999999999999999999999999999999999998888999999999998
Q ss_pred ----------------------eeeecCc-cccccccccce
Q psy3981 233 ----------------------YGMLGHP-KFRQALDKKFP 250 (276)
Q Consensus 233 ----------------------y~aI~~P-~~~~~~~~~~~ 250 (276)
|.||+|| +|++ ++++++
T Consensus 115 ~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~-~~~~~~ 154 (349)
T 1u19_A 115 GFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHA 154 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCC-CCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheeeCCcccee-eccchh
Confidence 8899999 7765 555544
No 27
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.45 E-value=7.7e-15 Score=126.21 Aligned_cols=97 Identities=24% Similarity=0.460 Sum_probs=89.0
Q ss_pred chhhHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCChhHHHHHHHHHHHHHHHhhhhhhHHHHhhcccccccccccee--
Q psy3981 155 LWYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGPFMCEL-- 232 (276)
Q Consensus 155 ~~~~~l~~~~~~~~~~~~~~n~~vi~~~~~~~~~~~~~~~~l~nLa~~Dl~~~~~~~p~~~~~~~~~~w~~g~~~C~~-- 232 (276)
.+.....+++.+++++|++||.++++++.+++++|+++|+++.|||++|++.++...|..+.....++|.+|+..|++
T Consensus 9 ~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~ 88 (315)
T 4amj_A 9 QWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVVRGTWLWGSFLCELWT 88 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHSSCCSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHhcCCeeccccHHHHHH
Confidence 455677888999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred ---------------------eeeecCc-cccccccccceE
Q psy3981 233 ---------------------YGMLGHP-KFRQALDKKFPS 251 (276)
Q Consensus 233 ---------------------y~aI~~P-~~~~~~~~~~~~ 251 (276)
|.||++| +|++.++++++.
T Consensus 89 ~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~ 129 (315)
T 4amj_A 89 SLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAK 129 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHH
Confidence 8899999 998888887664
No 28
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.42 E-value=4.8e-14 Score=127.70 Aligned_cols=99 Identities=19% Similarity=0.342 Sum_probs=83.4
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCChhHHHHHHHHHHHHHHHhhhhhhHHHHhhccccccccccce
Q psy3981 152 MHPLWYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGPFMCE 231 (276)
Q Consensus 152 ~~~~~~~~l~~~~~~~~~~~~~~n~~vi~~~~~~~~~~~~~~~~l~nLa~~Dl~~~~~~~p~~~~~~~~~~w~~g~~~C~ 231 (276)
..+..+..+.+++.+++++|++||+++++++.+++++|+++|+|++|||++|++. ...+|..+.....+.|.+|+..|+
T Consensus 120 ~~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~-~~~~p~~~~~~~~~~~~~~~~~C~ 198 (434)
T 4ea3_A 120 LPLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLV-LLTLPFQGTDILLGFWPFGNALCK 198 (434)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHH-HTTHHHHHHHHHHTSCTTHHHHHH
T ss_pred CChhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHH-HHHhHHHHHHHHhcCCcCcccHHH
Confidence 3455677788899999999999999999999999999999999999999999998 556799999999999999999999
Q ss_pred e-----------------------eeeecCc-cccccccccceE
Q psy3981 232 L-----------------------YGMLGHP-KFRQALDKKFPS 251 (276)
Q Consensus 232 ~-----------------------y~aI~~P-~~~~~~~~~~~~ 251 (276)
+ |.+|+|| +|...++++++.
T Consensus 199 ~~~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~ 242 (434)
T 4ea3_A 199 TVIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQ 242 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhEEEcccccccccchhhhH
Confidence 8 8899999 999888887654
No 29
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.42 E-value=9.4e-14 Score=122.34 Aligned_cols=85 Identities=29% Similarity=0.464 Sum_probs=78.9
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCChhHHHHHHHHHHHHHHHhhhhhhHHHHhhcccccccccccee-----
Q psy3981 158 QALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGPFMCEL----- 232 (276)
Q Consensus 158 ~~l~~~~~~~~~~~~~~n~~vi~~~~~~~~~~~~~~~~l~nLa~~Dl~~~~~~~p~~~~~~~~~~w~~g~~~C~~----- 232 (276)
.++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|++.++..+|..+.....++|.+|+..|++
T Consensus 33 ~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~~~~~~~~~~~C~~~~~~~ 112 (364)
T 2ks9_A 33 VLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAVHNEWYYGLFYCKFHNFFP 112 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHTSCSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhHHHHH
Confidence 344788899999999999999999999999999999999999999999999999999988888999999999998
Q ss_pred ------------------eeeecCc-ccc
Q psy3981 233 ------------------YGMLGHP-KFR 242 (276)
Q Consensus 233 ------------------y~aI~~P-~~~ 242 (276)
|.||+|| +|+
T Consensus 113 ~~~~~~s~~~l~~isidRy~aI~~P~~~~ 141 (364)
T 2ks9_A 113 IAAVFASIYSMTAVAFDRYMAIIHPLQPR 141 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCCTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhcccc
Confidence 8899999 765
No 30
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.41 E-value=6.6e-14 Score=129.87 Aligned_cols=93 Identities=20% Similarity=0.216 Sum_probs=79.5
Q ss_pred hHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCChhHHHHHHHHHHHHHHHhhhhhhHHHHhhcccccccccccee-----
Q psy3981 158 QALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGPFMCEL----- 232 (276)
Q Consensus 158 ~~l~~~~~~~~~~~~~~n~~vi~~~~~~~~~~~~~~~~l~nLa~~Dl~~~~~~~p~~~~~~~~~~w~~g~~~C~~----- 232 (276)
.++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|+++++..+|..+.. ..+.|.+|+..|++
T Consensus 64 ~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~-~~~~~~~~~~~c~~~~~~~ 142 (520)
T 3v2y_A 64 KLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLS-GATTYKLTPAQWFLREGSM 142 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHS-GGGGTTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHc-cccceeeCccccchHHHHH
Confidence 678889999999999999999999999999999999999999999999999999988777 66789999999988
Q ss_pred ------------------eeeecCc-cccccccccceEE
Q psy3981 233 ------------------YGMLGHP-KFRQALDKKFPSL 252 (276)
Q Consensus 233 ------------------y~aI~~P-~~~~~~~~~~~~~ 252 (276)
|.||+ | +|...++++++..
T Consensus 143 ~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t~~~~~~ 180 (520)
T 3v2y_A 143 FVALSASVFSLLAIAIERYITML-KMKLHNGSNNFRLFL 180 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC-C-------CCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhEEe-ccccccccchhHHHH
Confidence 88999 9 9999998887643
No 31
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.41 E-value=3.7e-14 Score=131.26 Aligned_cols=102 Identities=25% Similarity=0.486 Sum_probs=90.9
Q ss_pred CCCCchhhHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCChhHHHHHHHHHHHHHHHhhhhhhHHHHhhccccccccccc
Q psy3981 151 PMHPLWYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGPFMC 230 (276)
Q Consensus 151 ~~~~~~~~~l~~~~~~~~~~~~~~n~~vi~~~~~~~~~~~~~~~~l~nLa~~Dl~~~~~~~p~~~~~~~~~~w~~g~~~C 230 (276)
...+.+...+.+++.+++++|++||+++++++.+++++|+++|+|++|||++|+++++..+|..+.....+.|.+|+..|
T Consensus 176 ~~~~~~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~~~~~~~~~~~C 255 (514)
T 3sn6_R 176 AADEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHILTKTWTFGNFWC 255 (514)
T ss_dssp ---CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHTSCCSCSHHH
T ss_pred cCCchHHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHHcCCeeCCcchh
Confidence 34555667788899999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ee-----------------------eeeecCc-cccccccccceEE
Q psy3981 231 EL-----------------------YGMLGHP-KFRQALDKKFPSL 252 (276)
Q Consensus 231 ~~-----------------------y~aI~~P-~~~~~~~~~~~~~ 252 (276)
++ |.+|+|| +|+..++++++..
T Consensus 256 ~~~~~l~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~ 301 (514)
T 3sn6_R 256 EFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARV 301 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccchhccchHHHH
Confidence 98 8899999 9988888876543
No 32
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.41 E-value=8.7e-14 Score=127.65 Aligned_cols=96 Identities=19% Similarity=0.318 Sum_probs=85.2
Q ss_pred CCchhhHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCChhHHHHHHHHHHHHHHHhhhhhhHHHHhhcccccccccccee
Q psy3981 153 HPLWYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGPFMCEL 232 (276)
Q Consensus 153 ~~~~~~~l~~~~~~~~~~~~~~n~~vi~~~~~~~~~~~~~~~~l~nLa~~Dl~~~~~~~p~~~~~~~~~~w~~g~~~C~~ 232 (276)
......++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|++++ ..+|..+..... +|.+|+..|++
T Consensus 44 ~~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~~-~~~~~~~~C~~ 121 (502)
T 3odu_A 44 ANFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAVA-NWYFGNFLCKA 121 (502)
T ss_dssp CTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHHT-CCCSHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHhc-CCcCCchhhhh
Confidence 3445677888999999999999999999999999999999999999999999996 567988887765 79999999998
Q ss_pred -----------------------eeeecCc-cccccccccce
Q psy3981 233 -----------------------YGMLGHP-KFRQALDKKFP 250 (276)
Q Consensus 233 -----------------------y~aI~~P-~~~~~~~~~~~ 250 (276)
|.||+|| +|+..++++++
T Consensus 122 ~~~~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~ 163 (502)
T 3odu_A 122 VHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAE 163 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhheecccccccccchhHH
Confidence 8899999 99888888764
No 33
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.39 E-value=1.8e-13 Score=124.28 Aligned_cols=100 Identities=34% Similarity=0.704 Sum_probs=88.7
Q ss_pred CCCchhhHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCChhHHHHHHHHHHHHHHHhhh-hhhHHHHhhccccccccccc
Q psy3981 152 MHPLWYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSM-APTMVLNCFYETWTLGPFMC 230 (276)
Q Consensus 152 ~~~~~~~~l~~~~~~~~~~~~~~n~~vi~~~~~~~~~~~~~~~~l~nLa~~Dl~~~~~~-~p~~~~~~~~~~w~~g~~~C 230 (276)
........+.+++.+++++|++||+++++++.+++++|+++|++++|||++|++.++.. +|..+.....++|.+|+..|
T Consensus 29 ~~~~~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~~~~~~~~~~~C 108 (448)
T 2z73_A 29 VPDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCFLKKWIFGFAAC 108 (448)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHHTTSCCSHHHHH
T ss_pred CCchHHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHhcCCccCCHHHH
Confidence 33345667788899999999999999999999999999999999999999999999874 89999888889999999999
Q ss_pred ee-----------------------eeeecCc-cccccccccceE
Q psy3981 231 EL-----------------------YGMLGHP-KFRQALDKKFPS 251 (276)
Q Consensus 231 ~~-----------------------y~aI~~P-~~~~~~~~~~~~ 251 (276)
++ |.+|++| +|++.++++++.
T Consensus 109 ~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~ 153 (448)
T 2z73_A 109 KVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAF 153 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccceechhHHH
Confidence 98 8899999 888888887654
No 34
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.37 E-value=8.3e-14 Score=127.12 Aligned_cols=96 Identities=23% Similarity=0.323 Sum_probs=81.1
Q ss_pred chhhHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCChhHHHHHHHHHHHHHHHhhhhhhHHHHhhc-ccccccccccee-
Q psy3981 155 LWYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFY-ETWTLGPFMCEL- 232 (276)
Q Consensus 155 ~~~~~l~~~~~~~~~~~~~~n~~vi~~~~~~~~~~~~~~~~l~nLa~~Dl~~~~~~~p~~~~~~~~-~~w~~g~~~C~~- 232 (276)
..+.++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|+++++..+|..+...+. +.|.+|+.+|++
T Consensus 36 ~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~C~~~ 115 (481)
T 3pbl_A 36 RPHAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVTGGVWNFSRICCDVF 115 (481)
T ss_dssp -----CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHTTSCCCSCHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCcchhhhH
Confidence 344556678899999999999999999999999999999999999999999999999999887766 679999999998
Q ss_pred ----------------------eeeecCc-cc---cccccccce
Q psy3981 233 ----------------------YGMLGHP-KF---RQALDKKFP 250 (276)
Q Consensus 233 ----------------------y~aI~~P-~~---~~~~~~~~~ 250 (276)
|.||++| +| ...++++++
T Consensus 116 ~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~ 159 (481)
T 3pbl_A 116 VTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRV 159 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccHHHH
Confidence 8899999 88 455555544
No 35
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.36 E-value=2.5e-13 Score=123.90 Aligned_cols=95 Identities=16% Similarity=0.216 Sum_probs=84.8
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCChhHHHHHHHHHHHHHHHhhhhhhHHHHhhcccccccccccee---
Q psy3981 156 WYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGPFMCEL--- 232 (276)
Q Consensus 156 ~~~~l~~~~~~~~~~~~~~n~~vi~~~~~~~~~~~~~~~~l~nLa~~Dl~~~~~~~p~~~~~~~~~~w~~g~~~C~~--- 232 (276)
...++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|+++++..+|..+.... .|.+|..+|++
T Consensus 20 ~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~--~~~~~~~~C~~~~~ 97 (488)
T 3eml_A 20 GSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIST--GFCAACHGCLFIAC 97 (488)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHTT--CCEECHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cccccchHHHHHHH
Confidence 4566778889999999999999999999999999999999999999999999999998887554 68899999998
Q ss_pred --------------------eeeecCc-cccccccccceEE
Q psy3981 233 --------------------YGMLGHP-KFRQALDKKFPSL 252 (276)
Q Consensus 233 --------------------y~aI~~P-~~~~~~~~~~~~~ 252 (276)
|.+|++| +|...++++++..
T Consensus 98 ~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~ 138 (488)
T 3eml_A 98 FVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKG 138 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhheeEecccccccccCHHHHHH
Confidence 8899999 9999888877643
No 36
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.34 E-value=1.6e-13 Score=123.93 Aligned_cols=95 Identities=16% Similarity=0.223 Sum_probs=83.5
Q ss_pred hhhHHHHHHHHHHHHhhhhhhhhhhhhhccCCCCChhHHHHHHHHHHHHHHHhhhhhhHHHHhhcccccccccccee---
Q psy3981 156 WYQALGLTMICLGTMSMVGNGIVVYIFLCTKNLRTPSNILVVNLAFSDFCMMFSMAPTMVLNCFYETWTLGPFMCEL--- 232 (276)
Q Consensus 156 ~~~~l~~~~~~~~~~~~~~n~~vi~~~~~~~~~~~~~~~~l~nLa~~Dl~~~~~~~p~~~~~~~~~~w~~g~~~C~~--- 232 (276)
...++.+++.+++++|++||+++++++.+++++|+++|+|++|||++|+++++..+|..+... ..|..|..+|++
T Consensus 30 ~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~--~~~~~~~~~C~~~~~ 107 (447)
T 4eiy_A 30 GSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS--TGFCAACHGCLFIAC 107 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHH--TTCEEEHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh--cccccCccHHHHHHH
Confidence 345677888999999999999999999999999999999999999999999999999887743 467789999998
Q ss_pred --------------------eeeecCc-cccccccccceEE
Q psy3981 233 --------------------YGMLGHP-KFRQALDKKFPSL 252 (276)
Q Consensus 233 --------------------y~aI~~P-~~~~~~~~~~~~~ 252 (276)
|.+|++| +|...++++++..
T Consensus 108 ~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~ 148 (447)
T 4eiy_A 108 FVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKG 148 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHeEEecccccchhhhHHHHHH
Confidence 8899999 9998888876643
No 37
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=98.46 E-value=8.7e-09 Score=58.15 Aligned_cols=30 Identities=20% Similarity=0.537 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHHHhchhHHHHHHHHH
Q psy3981 85 EIKLAKVALMTISLWFLAWTPYLVINFGGI 114 (276)
Q Consensus 85 ~~k~~k~l~~vv~~F~icw~Py~i~~l~~~ 114 (276)
|+|++|++.+++++|++||+||++..++..
T Consensus 1 e~k~~k~l~~vv~~F~icW~P~~i~~~~~~ 30 (33)
T 2ki9_A 1 DVRLAKTLGLVLAVLLICWFPVLALMAHSL 30 (33)
T ss_dssp CCSSSSHHHHHHHHHTTTSSHHHHHHTTTT
T ss_pred CchhhhhHHHHHHHHHHHHhHHHHHHHHHH
Confidence 357789999999999999999999877654
No 38
>2koe_A Human cannabinoid receptor 1 - helix 7/8 peptide; GPCR, HCB1, membrane protein, signaling protein; NMR {Homo sapiens}
Probab=97.56 E-value=7.4e-06 Score=47.93 Aligned_cols=26 Identities=31% Similarity=0.565 Sum_probs=21.9
Q ss_pred HHHHHHhhcccCccccccccccccCC
Q psy3981 124 ITIWGSVFAKANAVYNPIVYAIRYQY 149 (276)
Q Consensus 124 ~~~~~~~l~~~ns~~NPiIY~~~~~~ 149 (276)
++.++.+++++||++||+||++.+++
T Consensus 2 ~~~~~~~l~~~ns~lNPiIY~~~~~~ 27 (40)
T 2koe_A 2 VFAFASMLCLLNSTVNPIIYALRSKD 27 (40)
T ss_dssp HHHHHHHHHHHHHHSSTTTTBTTBHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHccHH
Confidence 34567889999999999999988754
No 39
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=96.01 E-value=0.0011 Score=42.55 Aligned_cols=31 Identities=16% Similarity=0.299 Sum_probs=27.1
Q ss_pred HHHHHHHHHHHHhhhhhhhhhhhhhccCCCC
Q psy3981 159 ALGLTMICLGTMSMVGNGIVVYIFLCTKNLR 189 (276)
Q Consensus 159 ~l~~~~~~~~~~~~~~n~~vi~~~~~~~~~~ 189 (276)
++.++|.+++++|++||++++|++.++|..|
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~~~~~~ 60 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFRKKGHH 60 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHHHSSSC
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeEecccc
Confidence 6778899999999999999999998877543
No 40
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=82.97 E-value=0.14 Score=27.42 Aligned_cols=17 Identities=6% Similarity=0.137 Sum_probs=13.6
Q ss_pred eeeecCc-cccccccccc
Q psy3981 233 YGMLGHP-KFRQALDKKF 249 (276)
Q Consensus 233 y~aI~~P-~~~~~~~~~~ 249 (276)
|.||+|| +|...+++++
T Consensus 15 y~aI~~Pl~~~~~~t~~~ 32 (32)
T 1hll_A 15 YWSITQAIEYNLKRTPRR 32 (32)
T ss_dssp HHHHHHHHGGGSSCCCCC
T ss_pred HHHhhhhhhcccccCCCC
Confidence 5599999 9988887753
No 41
>2jx4_A Vasopressin V2 receptor; protein, G-protein coupled receptor, glycoprotein, lipoprotein, membrane, palmitate, phosphorylation, receptor transducer; HET: DGN NLE CCS; NMR {Synthetic}
Probab=62.46 E-value=2.3 Score=25.69 Aligned_cols=14 Identities=14% Similarity=0.147 Sum_probs=10.6
Q ss_pred HHHHHHHHHHhHHH
Q psy3981 48 YYFIVRAVSVHEKQ 61 (276)
Q Consensus 48 Y~~I~~~l~~~~~~ 61 (276)
|++|++.+|++.+.
T Consensus 2 y~~I~~~Iw~~~~~ 15 (52)
T 2jx4_A 2 QVLIFREIHASLVP 15 (52)
T ss_dssp CHHHHHHHHHHHTH
T ss_pred eEEEEeHHHhhCCc
Confidence 67888888877654
No 42
>2rdd_B UPF0092 membrane protein YAJC; drug resistance, multidrug efflux, transporter, antiporter, novel transmembrane helix, ACRB, inner membrane; HET: AIC; 3.50A {Escherichia coli}
Probab=44.80 E-value=28 Score=19.09 Aligned_cols=21 Identities=19% Similarity=0.507 Sum_probs=11.9
Q ss_pred HHHHHH-HHHHHHHHHHHHHhH
Q psy3981 39 VPLILI-IYAYYFIVRAVSVHE 59 (276)
Q Consensus 39 iPl~ii-~~~Y~~I~~~l~~~~ 59 (276)
+|++++ ++.|..+.|--+|+.
T Consensus 7 l~~v~~~~ifYFl~iRPQ~Kr~ 28 (37)
T 2rdd_B 7 LMLVVFGLIFYFMILRPQQKRT 28 (37)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHH
Confidence 444444 567877766555443
Done!