BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3987
(175 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|A8MXZ3|KRA91_HUMAN Keratin-associated protein 9-1 OS=Homo sapiens GN=KRTAP9-1 PE=3
SV=1
Length = 250
Score = 57.8 bits (138), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/163 (36%), Positives = 78/163 (47%), Gaps = 13/163 (7%)
Query: 1 SVCGTAVCQSVCGTAVCQSV-CGTAVCQSVCGTAVCQ-SVCGTAVCQSV-CGTAVC-QSV 56
S C + CQ C CQ+ C T CQ C + CQ S C T CQ CG++ C Q+
Sbjct: 41 SCCVPSCCQPCCHPTCCQNTCCRTTCCQPTCVASCCQPSCCSTPCCQPTCCGSSCCGQTS 100
Query: 57 CGTAVCQSVCGTAVCQSVCGTAVCQSVC-GTAVCQSVCGTAVCQSVCGTAVCQSV-CGTA 114
CG++ CQ +CG++ CQ C Q++C T CQ C C C CQ CG++
Sbjct: 101 CGSSCCQPICGSSCCQPCCHPTCYQTICFRTTCCQPTCCQPTC---CRNTSCQPTCCGSS 157
Query: 115 VCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCG 157
CQ C CQ++C + CQ C T C T CQ CG
Sbjct: 158 CCQPCCHPTCCQTICRSTCCQPSCVTR----CCSTPCCQPTCG 196
Score = 50.1 bits (118), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 53/153 (34%), Positives = 73/153 (47%), Gaps = 13/153 (8%)
Query: 1 SVCGTAVCQSVC-GTAVC-QSVCGTAVCQSVCGTAVCQSVCGTAVCQSVC-GTAVCQSVC 57
S C T CQ C G++ C Q+ CG++ CQ +CG++ CQ C Q++C T CQ C
Sbjct: 79 SCCSTPCCQPTCCGSSCCGQTSCGSSCCQPICGSSCCQPCCHPTCYQTICFRTTCCQPTC 138
Query: 58 GTAVCQSVCGTAVCQSVC-GTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVC 116
C C CQ C G++ CQ C CQ++C + CQ C T C T C
Sbjct: 139 CQPTC---CRNTSCQPTCCGSSCCQPCCHPTCCQTICRSTCCQPSCVTR----CCSTPCC 191
Query: 117 QSVC-GTAVCQSVCG-TAVCQSVCGTAVCQSVC 147
Q C G++ C C ++ C C CQ+ C
Sbjct: 192 QPTCGGSSCCSQTCNESSYCLPCCRPTCCQTTC 224
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 70/160 (43%), Gaps = 21/160 (13%)
Query: 31 GTAVCQ-SVCGTAVCQSVCGTAVCQSVC-GTAVCQSVCGTAVCQSVCGTAVCQSVCGTAV 88
T CQ S C + CQ C CQ+ C T CQ C + CQ + C + C
Sbjct: 34 STPCCQPSCCVPSCCQPCCHPTCCQNTCCRTTCCQPTCVASCCQP----SCCSTPCCQPT 89
Query: 89 C-------QSVCGTAVCQSVCGTAVCQSVCGTAVCQSVC-GTAVCQSVCGTAVC------ 134
C Q+ CG++ CQ +CG++ CQ C Q++C T CQ C C
Sbjct: 90 CCGSSCCGQTSCGSSCCQPICGSSCCQPCCHPTCYQTICFRTTCCQPTCCQPTCCRNTSC 149
Query: 135 -QSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCHVP 173
+ CG++ CQ C CQ++C + CQ C T C P
Sbjct: 150 QPTCCGSSCCQPCCHPTCCQTICRSTCCQPSCVTRCCSTP 189
>sp|A2A5X5|KR161_MOUSE Keratin-associated protein 16-1 OS=Mus musculus GN=Krtap16-1 PE=3
SV=1
Length = 502
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/139 (40%), Positives = 68/139 (48%), Gaps = 16/139 (11%)
Query: 3 CGTAVCQSVCGTAVCQSV-CGTAVCQSV-CGTAVCQSV------CGTAVCQSVCGTAVC- 53
C +CQ C + CQ V C T+ CQ V C A CQ V C +C+ C +AVC
Sbjct: 134 CEATMCQPSCSVSSCQPVCCETSSCQPVLCLPATCQPVICKPCCCQPVICEPSCCSAVCA 193
Query: 54 -QSVCGTAVCQS-VCGTAVCQSVCGTAV-CQSVCGTA-VCQSV-CGTAVCQSVCGTA-VC 107
+ C +C+ VC A CQ VC T C SVC A CQ V C T+ C+ C A C
Sbjct: 194 VPASCQPMICEPVVCEPACCQPVCPTPSCCPSVCSAASSCQPVGCETSPCEPPCSEASAC 253
Query: 108 Q-SVCGTAVCQSVCGTAVC 125
Q S C VC+ VC VC
Sbjct: 254 QPSACMALVCEPVCLRPVC 272
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 69/181 (38%), Positives = 91/181 (50%), Gaps = 18/181 (9%)
Query: 8 CQSVCGTAVCQSVCGTAVCQSVCG-TAVCQSVCGTA-VCQSVCGTAVC-QSVCGTA-VCQ 63
C+ CG+ S CG+ CQ C ++ CQ VC A +C+ C + C Q VC A +C+
Sbjct: 45 CEDSCGS----SGCGSQCCQPSCSVSSCCQPVCCEATICEPSCSVSSCAQPVCCEATICE 100
Query: 64 SVCGT-AVCQSVCGTA-VCQSVCGTAVC-QSVCGTA-VCQSVCGTAVCQSVC-GTAVCQS 118
C + CQ VC A +C+ C + C Q VC A +CQ C + CQ VC T+ CQ
Sbjct: 101 PSCSMGSCCQPVCCEATICEPSCSVSTCAQPVCCEATMCQPSCSVSSCQPVCCETSSCQP 160
Query: 119 V-CGTAVCQSV-CGTAVCQSV-CGTAVCQSVCG-TAVCQS-VCGTAVCQSVCGTAVCHVP 173
V C A CQ V C CQ V C + C +VC A CQ +C VC+ C VC P
Sbjct: 161 VLCLPATCQPVICKPCCCQPVICEPSCCSAVCAVPASCQPMICEPVVCEPACCQPVCPTP 220
Query: 174 T 174
+
Sbjct: 221 S 221
Score = 38.9 bits (89), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 71/190 (37%), Positives = 93/190 (48%), Gaps = 28/190 (14%)
Query: 1 SVCGTAVCQSVCGTAVC-QSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCG- 58
S+C T V CG VC S C + Q V C+ CG+ S CG+ CQ C
Sbjct: 17 SLCSTEV---SCGGPVCLPSSCRSQTWQLV----TCEDSCGS----SGCGSQCCQPSCSV 65
Query: 59 TAVCQSVCGTA-VCQSVCGTAVC-QSVCGTA-VCQSVCGT-AVCQSVCGTA-VCQSVCGT 113
++ CQ VC A +C+ C + C Q VC A +C+ C + CQ VC A +C+ C
Sbjct: 66 SSCCQPVCCEATICEPSCSVSSCAQPVCCEATICEPSCSMGSCCQPVCCEATICEPSCSV 125
Query: 114 AVC-QSVCGTA-VCQSVCGTAVCQSVC-GTAVCQSV-CGTAVCQSV------CGTAVCQS 163
+ C Q VC A +CQ C + CQ VC T+ CQ V C A CQ V C +C+
Sbjct: 126 STCAQPVCCEATMCQPSCSVSSCQPVCCETSSCQPVLCLPATCQPVICKPCCCQPVICEP 185
Query: 164 VCGTAVCHVP 173
C +AVC VP
Sbjct: 186 SCCSAVCAVP 195
Score = 35.4 bits (80), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 76/197 (38%), Gaps = 41/197 (20%)
Query: 2 VCGTAVCQSVCGTAVCQSVCGTAV-CQSVCGTA-VCQSV-CGTAVCQSVCGTA-VCQ-SV 56
+C VC+ C CQ VC T C SVC A CQ V C T+ C+ C A CQ S
Sbjct: 202 ICEPVVCEPAC----CQPVCPTPSCCPSVCSAASSCQPVGCETSPCEPPCSEASACQPSA 257
Query: 57 CGTAVCQSVCGTAVC--QSVCGTA---------------VCQSVCGTAV--CQSVCGTAV 97
C VC+ VC VC Q C +CQ VC SVC
Sbjct: 258 CMALVCEPVCLRPVCCVQGPCEPPCVSSSCQDSSCCVSSICQPVCPEPSPCLPSVCVPTP 317
Query: 98 CQSVCGTAVCQSVCGTAVCQSV-CGTAVCQSVC------GTAVCQSVCGTAVCQSVCGTA 150
CQ C C + C+ + C + CQ C +A+CQ C ++ +
Sbjct: 318 CQPSCYIV---KRCRSVSCEPISCPSPSCQPACCRPGSSASAICQPACPP---RTFYIPS 371
Query: 151 VCQSVCGTAVCQSVCGT 167
C+ C C+ +C
Sbjct: 372 SCKPPCSPVSCRPICRP 388
>sp|A8MUX0|KR161_HUMAN Keratin-associated protein 16-1 OS=Homo sapiens GN=KRTAP16-1 PE=3
SV=1
Length = 517
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 61/170 (35%), Positives = 80/170 (47%), Gaps = 25/170 (14%)
Query: 11 VCGTAVCQSV-CGTAVCQSVCGTAVCQSVCGTAVC--QSVCGTAVCQSVCGTAVCQSVCG 67
+C CQ V C ++ CQ V VC+ C +AVC S C VC+ C CQ VC
Sbjct: 183 LCVPTSCQPVLCKSSCCQPV----VCEPSCCSAVCTLPSSCQPVVCEPSC----CQPVCP 234
Query: 68 TAVCQSVCGTAVCQSVC-GTAVCQSVCG-TAVCQS-VCGTAVCQSVCGTAVC--QSVCGT 122
T C SV T+ CQ+VC + C+ C +++CQ C VC+ VC VC QS C
Sbjct: 235 TPTC-SV--TSSCQAVCCDPSPCEPSCSESSICQPATCVALVCEPVCLRPVCCVQSSCEP 291
Query: 123 AVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCHV 172
S C C C +++CQ +C S C AVC S C+V
Sbjct: 292 PSVPSTCQEPSC---CVSSICQPICSEP---SPCSPAVCVSSPCQPTCYV 335
Score = 36.6 bits (83), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 65/175 (37%), Positives = 84/175 (48%), Gaps = 22/175 (12%)
Query: 12 CGTAVCQSVCGTAV-CQSVCGTAV-CQSVCGTAVC-QSVCGTA-VCQSVCGTAVC-QSVC 66
C +C+ C + CQ VC A C+ C + C Q VC A +C+ C + C Q VC
Sbjct: 74 CDPVICEPSCSVSSGCQPVCCEATTCEPSCSVSNCYQPVCFEATICEPSCSVSNCCQPVC 133
Query: 67 GTA-VCQSVCGTAVC-QSVC-GTAVCQSVCG-TAVCQSVCGTAV-CQSV-CGTAVCQSV- 119
A VC+ C + C Q VC A+C+ C ++ CQ V A CQ V C CQ V
Sbjct: 134 FEATVCEPSCSVSSCAQPVCCEPAICEPSCSVSSCCQPVGSEATSCQPVLCVPTSCQPVL 193
Query: 120 CGTAVCQSVCGTAVCQSVCGTAVC--QSVCGTAVCQSVCGTAVCQSVCGTAVCHV 172
C ++ CQ V VC+ C +AVC S C VC+ C CQ VC T C V
Sbjct: 194 CKSSCCQPV----VCEPSCCSAVCTLPSSCQPVVCEPSC----CQPVCPTPTCSV 240
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 64/180 (35%), Positives = 87/180 (48%), Gaps = 20/180 (11%)
Query: 8 CQSVCGTAVCQSVCGTAVCQ-SVCGTAVCQSVCGTAVCQSVCGTAV-CQSVCGTAV-CQS 64
CQ CG++ C C C S C +C C +C+ C + CQ VC A C+
Sbjct: 45 CQDSCGSSSCGPQCRQPSCPVSSCAQPLC---CDPVICEPSCSVSSGCQPVCCEATTCEP 101
Query: 65 VCGTAVC-QSVCGTA-VCQSVCGTAVC-QSVCGTA-VCQSVCGTAVC-QSVC-GTAVCQS 118
C + C Q VC A +C+ C + C Q VC A VC+ C + C Q VC A+C+
Sbjct: 102 SCSVSNCYQPVCFEATICEPSCSVSNCCQPVCFEATVCEPSCSVSSCAQPVCCEPAICEP 161
Query: 119 VCG-TAVCQSVCGTAV-CQSV-CGTAVCQSV-CGTAVCQSVCGTAVCQSVCGTAVCHVPT 174
C ++ CQ V A CQ V C CQ V C ++ CQ V VC+ C +AVC +P+
Sbjct: 162 SCSVSSCCQPVGSEATSCQPVLCVPTSCQPVLCKSSCCQPV----VCEPSCCSAVCTLPS 217
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 62/168 (36%), Positives = 81/168 (48%), Gaps = 18/168 (10%)
Query: 21 CGTAVCQSVCGTAV-CQSVCGTAV-CQSVCGTAVC-QSVCGTA-VCQSVCGTAVC-QSVC 75
C +C+ C + CQ VC A C+ C + C Q VC A +C+ C + C Q VC
Sbjct: 74 CDPVICEPSCSVSSGCQPVCCEATTCEPSCSVSNCYQPVCFEATICEPSCSVSNCCQPVC 133
Query: 76 GTA-VCQSVCGTAVC-QSVC-GTAVCQSVCG-TAVCQSVCGTAV-CQSV-CGTAVCQSV- 128
A VC+ C + C Q VC A+C+ C ++ CQ V A CQ V C CQ V
Sbjct: 134 FEATVCEPSCSVSSCAQPVCCEPAICEPSCSVSSCCQPVGSEATSCQPVLCVPTSCQPVL 193
Query: 129 CGTAVCQSVCGTAVCQSVCGTAVC--QSVCGTAVCQSVCGTAVCHVPT 174
C ++ CQ V VC+ C +AVC S C VC+ C VC PT
Sbjct: 194 CKSSCCQPV----VCEPSCCSAVCTLPSSCQPVVCEPSCCQPVCPTPT 237
>sp|Q8K4G1|LTBP4_MOUSE Latent-transforming growth factor beta-binding protein 4 OS=Mus
musculus GN=Ltbp4 PE=2 SV=2
Length = 1666
Score = 33.9 bits (76), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 63/152 (41%), Gaps = 17/152 (11%)
Query: 29 VCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCG-TAVCQSVCGTAVCQSVCGTA 87
+CG+ C++ G+ C C GT C + ++CG C++ G+
Sbjct: 1014 LCGSQRCENSPGSYRCVRDCDPGYHPGPEGT--CDDIDECREYGSAICGAQRCENTPGSY 1071
Query: 88 VCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCG-TAVCQSVCGTAVCQSVCGTAVCQSV 146
C C Q G CQ V +S CG A+CQ++ G+ C VC +
Sbjct: 1072 RCTPACDPGY-QPTPGGG-CQDV-DECRNRSFCGAHAMCQNLPGSFQC--VCDQGYEGAR 1126
Query: 147 CGT--------AVCQSVCGTAVCQSVCGTAVC 170
G Q VCG+A+C++V G+ +C
Sbjct: 1127 DGRHCVDVNECETLQGVCGSALCENVEGSFLC 1158
Score = 30.8 bits (68), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 68/186 (36%), Gaps = 22/186 (11%)
Query: 2 VCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAV 61
C C++ G+ C VCGT Q+ C V C C++ G+ +
Sbjct: 640 PCAPGRCENTPGSFRC--VCGTGF-QAGPRATECLDVDECRRVPPPCDRGRCENTPGSFL 696
Query: 62 C------QSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAV 115
C Q+ A CQ V +CG VC+++ G+ C VC S C V
Sbjct: 697 CVCPAGYQAAPHGASCQDVDECTQSPGLCGRGVCENLPGSFRC--VCPAGFRGSACEEDV 754
Query: 116 CQ-----SVCGTAVCQSVCGTAVC------QSVCGTAVCQSVCGTAVCQSVCGTAVCQSV 164
+ CG C + G+ C +S A CQ V + S C C++
Sbjct: 755 DECAQQPPPCGPGRCDNTAGSFHCACPAGFRSRGPGAPCQDVDECSRSPSPCAYGRCENT 814
Query: 165 CGTAVC 170
G+ C
Sbjct: 815 EGSFKC 820
Score = 29.6 bits (65), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 14/106 (13%)
Query: 2 VCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCG-TAVCQSVCGTA 60
+CG C++ G+ C C Q G CQ V +S CG A+CQ++ G+
Sbjct: 1058 ICGAQRCENTPGSYRCTPACDPGY-QPTPGGG-CQDV-DECRNRSFCGAHAMCQNLPGSF 1114
Query: 61 VCQSVCGTAVCQSVCGT--------AVCQSVCGTAVCQSVCGTAVC 98
C VC + G Q VCG+A+C++V G+ +C
Sbjct: 1115 QC--VCDQGYEGARDGRHCVDVNECETLQGVCGSALCENVEGSFLC 1158
>sp|Q8N2S1|LTBP4_HUMAN Latent-transforming growth factor beta-binding protein 4 OS=Homo
sapiens GN=LTBP4 PE=1 SV=2
Length = 1624
Score = 33.5 bits (75), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 64/154 (41%), Gaps = 21/154 (13%)
Query: 29 VCGTAVCQSVCGTAVCQSVCGTAVCQSVCGT----AVCQS----VCGTAVCQSVCGTAVC 80
+CG+ C++ G+ C C GT CQ +CG C++ G+ C
Sbjct: 972 LCGSQRCENSPGSYRCVRDCDPGYHAGPEGTCDDVDECQEYGPEICGAQRCENTPGSYRC 1031
Query: 81 QSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCG-TAVCQSVCGTAVC---QSVCGTAVCQS 136
C Q G CQ V +S CG AVCQ++ G+ C Q G +
Sbjct: 1032 TPACDPGY-QPTPGGG-CQDV-DECRNRSFCGAHAVCQNLPGSFQCLCDQGYEGARDGRH 1088
Query: 137 VCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVC 170
C+++ Q VCG A+C++V G+ +C
Sbjct: 1089 CVDVNECETL------QGVCGAALCENVEGSFLC 1116
>sp|A8MTY7|KRA97_HUMAN Keratin-associated protein 9-7 OS=Homo sapiens GN=KRTAP9-7 PE=3
SV=1
Length = 169
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 64/144 (44%), Gaps = 9/144 (6%)
Query: 5 TAVCQSVCGTAVCQSVCGTAVCQSVCGTAVC--QSVCGTAVCQSVCGTAVCQSV-CGTAV 61
T C C C++ C + C + C S C ++ CQ C CQ+ C T
Sbjct: 2 THCCSPCCQPTCCRTTCWKPTTVTTCSSTPCCQPSCCVSSCCQPCCHPTCCQNTCCRTTC 61
Query: 62 CQSVCGTAVCQ-SVCGTAVCQSV-CGTAVC-QSVCGTAVCQ-SVCGTAVCQSVCGTAVCQ 117
CQ C T+ CQ S C T CQ + CG++ C Q+ CG++ CQ S C C+ C
Sbjct: 62 CQPTCVTSCCQPSCCSTPCCQPICCGSSCCGQTSCGSSCCQPSSCAPIYCRRTCYHPT-- 119
Query: 118 SVCGTAVCQSVCGTAVCQSVCGTA 141
SV CG++ CQ C A
Sbjct: 120 SVYLPGCLNQSCGSSCCQPCCRPA 143
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 64/144 (44%), Gaps = 9/144 (6%)
Query: 23 TAVCQSVCGTAVCQSVCGTAVCQSVCGTAVC--QSVCGTAVCQSVCGTAVCQSVC-GTAV 79
T C C C++ C + C + C S C ++ CQ C CQ+ C T
Sbjct: 2 THCCSPCCQPTCCRTTCWKPTTVTTCSSTPCCQPSCCVSSCCQPCCHPTCCQNTCCRTTC 61
Query: 80 CQSVCGTAVCQ-SVCGTAVCQSVC-GTAVC-QSVCGTAVCQ-SVCGTAVCQSVCGTAVCQ 135
CQ C T+ CQ S C T CQ +C G++ C Q+ CG++ CQ S C C+ C
Sbjct: 62 CQPTCVTSCCQPSCCSTPCCQPICCGSSCCGQTSCGSSCCQPSSCAPIYCRRTCYHPT-- 119
Query: 136 SVCGTAVCQSVCGTAVCQSVCGTA 159
SV CG++ CQ C A
Sbjct: 120 SVYLPGCLNQSCGSSCCQPCCRPA 143
Score = 32.0 bits (71), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 53/110 (48%), Gaps = 7/110 (6%)
Query: 1 SVCGTAVCQSVCGTAVCQSV-CGTAVCQSVCGTAVCQ-SVCGTAVCQSV-CGTAVC-QSV 56
S C ++ CQ C CQ+ C T CQ C T+ CQ S C T CQ + CG++ C Q+
Sbjct: 36 SCCVSSCCQPCCHPTCCQNTCCRTTCCQPTCVTSCCQPSCCSTPCCQPICCGSSCCGQTS 95
Query: 57 CGTAVCQ-SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTA 105
CG++ CQ S C C+ C SV CG++ CQ C A
Sbjct: 96 CGSSCCQPSSCAPIYCRRTCYHPT--SVYLPGCLNQSCGSSCCQPCCRPA 143
Score = 31.6 bits (70), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 4 GTAVCQSVCG-TAVCQSVCGTAVCQSV-CGTAVCQSVCGTAVCQ-SVCGTAVCQSV-CGT 59
T CQ C ++ CQ C CQ+ C T CQ C T+ CQ S C T CQ + CG+
Sbjct: 29 STPCCQPSCCVSSCCQPCCHPTCCQNTCCRTTCCQPTCVTSCCQPSCCSTPCCQPICCGS 88
Query: 60 AVC-QSVCGTAVCQ-SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTA 114
+ C Q+ CG++ CQ S C C+ C SV CG++ CQ C A
Sbjct: 89 SCCGQTSCGSSCCQPSSCAPIYCRRTCYHPT--SVYLPGCLNQSCGSSCCQPCCRPA 143
Score = 31.2 bits (69), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 62/137 (45%), Gaps = 9/137 (6%)
Query: 3 CGTAVCQSVCGTAVCQSVCGTAVC--QSVCGTAVCQSVCGTAVCQSV-CGTAVCQSVCGT 59
C C++ C + C + C S C ++ CQ C CQ+ C T CQ C T
Sbjct: 9 CQPTCCRTTCWKPTTVTTCSSTPCCQPSCCVSSCCQPCCHPTCCQNTCCRTTCCQPTCVT 68
Query: 60 AVCQ-SVCGTAVCQSV-CGTAVC-QSVCGTAVCQ-SVCGTAVCQSVCGTAVCQSVCGTAV 115
+ CQ S C T CQ + CG++ C Q+ CG++ CQ S C C+ C SV
Sbjct: 69 SCCQPSCCSTPCCQPICCGSSCCGQTSCGSSCCQPSSCAPIYCRRTCYHPT--SVYLPGC 126
Query: 116 CQSVCGTAVCQSVCGTA 132
CG++ CQ C A
Sbjct: 127 LNQSCGSSCCQPCCRPA 143
>sp|Q9BYQ2|KRA94_HUMAN Keratin-associated protein 9-4 OS=Homo sapiens GN=KRTAP9-4 PE=2
SV=2
Length = 154
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 52/126 (41%), Gaps = 10/126 (7%)
Query: 13 GTAVCQ-SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQ-SVCGTAVCQSVCGTAV 70
T CQ S C ++ CQ C CQ+ C CQ C T+ CQ S C T CQ C +
Sbjct: 34 STPCCQPSCCVSSCCQPCCRPTCCQNTC----CQPTCVTSCCQPSCCSTPCCQPTCCGSS 89
Query: 71 CQ--SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSV 128
C S C C+ C +VC CG+ CQ C A C++ C C S
Sbjct: 90 CDQSSSCAPVYCRRTCYYPT--TVCLPGCLNQSCGSNCCQPCCRPACCETTCFQPTCVSS 147
Query: 129 CGTAVC 134
C C
Sbjct: 148 CCQPFC 153
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 52/126 (41%), Gaps = 10/126 (7%)
Query: 31 GTAVCQ-SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQ-SVCGTAVCQSVCGTAV 88
T CQ S C ++ CQ C CQ+ C CQ C T+ CQ S C T CQ C +
Sbjct: 34 STPCCQPSCCVSSCCQPCCRPTCCQNTC----CQPTCVTSCCQPSCCSTPCCQPTCCGSS 89
Query: 89 CQ--SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSV 146
C S C C+ C +VC CG+ CQ C A C++ C C S
Sbjct: 90 CDQSSSCAPVYCRRTCYYPT--TVCLPGCLNQSCGSNCCQPCCRPACCETTCFQPTCVSS 147
Query: 147 CGTAVC 152
C C
Sbjct: 148 CCQPFC 153
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 52/126 (41%), Gaps = 10/126 (7%)
Query: 40 GTAVCQ-SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQ-SVCGTAVCQSVCGTAV 97
T CQ S C ++ CQ C CQ+ C CQ C T+ CQ S C T CQ C +
Sbjct: 34 STPCCQPSCCVSSCCQPCCRPTCCQNTC----CQPTCVTSCCQPSCCSTPCCQPTCCGSS 89
Query: 98 CQ--SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSV 155
C S C C+ C +VC CG+ CQ C A C++ C C S
Sbjct: 90 CDQSSSCAPVYCRRTCYYPT--TVCLPGCLNQSCGSNCCQPCCRPACCETTCFQPTCVSS 147
Query: 156 CGTAVC 161
C C
Sbjct: 148 CCQPFC 153
Score = 32.3 bits (72), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 52/126 (41%), Gaps = 10/126 (7%)
Query: 49 GTAVCQ-SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQ-SVCGTAVCQSVCGTAV 106
T CQ S C ++ CQ C CQ+ C CQ C T+ CQ S C T CQ C +
Sbjct: 34 STPCCQPSCCVSSCCQPCCRPTCCQNTC----CQPTCVTSCCQPSCCSTPCCQPTCCGSS 89
Query: 107 CQ--SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSV 164
C S C C+ C +VC CG+ CQ C A C++ C C S
Sbjct: 90 CDQSSSCAPVYCRRTCYYPT--TVCLPGCLNQSCGSNCCQPCCRPACCETTCFQPTCVSS 147
Query: 165 CGTAVC 170
C C
Sbjct: 148 CCQPFC 153
Score = 32.0 bits (71), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 49/119 (41%), Gaps = 9/119 (7%)
Query: 1 SVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQ-SVCGTAVCQSVCGTAVCQ--SVC 57
S C ++ CQ C CQ+ C CQ C T+ CQ S C T CQ C + C S C
Sbjct: 41 SCCVSSCCQPCCRPTCCQNTC----CQPTCVTSCCQPSCCSTPCCQPTCCGSSCDQSSSC 96
Query: 58 GTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVCQSVCGTAVC 116
C+ C +VC CG+ CQ C A C++ C C S C C
Sbjct: 97 APVYCRRTCYYPT--TVCLPGCLNQSCGSNCCQPCCRPACCETTCFQPTCVSSCCQPFC 153
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.128 0.461
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,830,845
Number of Sequences: 539616
Number of extensions: 2205722
Number of successful extensions: 18383
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 158
Number of HSP's that attempted gapping in prelim test: 9897
Number of HSP's gapped (non-prelim): 1807
length of query: 175
length of database: 191,569,459
effective HSP length: 110
effective length of query: 65
effective length of database: 132,211,699
effective search space: 8593760435
effective search space used: 8593760435
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 57 (26.6 bits)