Query psy3988
Match_columns 283
No_of_seqs 144 out of 1510
Neff 9.3
Searched_HMMs 29240
Date Fri Aug 16 22:23:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy3988.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/3988hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4grv_A Neurotensin receptor ty 100.0 1.2E-33 4.2E-38 263.2 13.1 147 38-188 30-180 (510)
2 3uon_A Human M2 muscarinic ace 100.0 6.4E-31 2.2E-35 240.8 11.9 143 38-186 21-164 (467)
3 3odu_A C-X-C chemokine recepto 100.0 3.8E-31 1.3E-35 244.6 10.3 145 37-189 45-190 (502)
4 1u19_A Rhodopsin; G protein-co 100.0 5.8E-30 2E-34 225.8 17.2 203 36-264 34-270 (349)
5 2rh1_A Beta-2-adrenergic recep 100.0 5.1E-31 1.7E-35 244.8 9.6 143 36-184 36-180 (500)
6 2lnl_A C-X-C chemokine recepto 100.0 1.9E-29 6.4E-34 218.4 15.4 212 40-265 11-232 (296)
7 4dkl_A MU-type opioid receptor 100.0 6.2E-30 2.1E-34 234.0 12.7 144 38-188 15-159 (464)
8 3vw7_A Proteinase-activated re 100.0 1.2E-29 4.3E-34 233.4 13.8 145 37-187 17-162 (484)
9 2ks9_A Substance-P receptor; w 100.0 4.6E-29 1.6E-33 221.7 16.6 201 40-265 32-266 (364)
10 3rze_A Histamine H1 receptor, 100.0 1E-29 3.6E-34 231.8 10.8 139 40-184 8-147 (452)
11 3eml_A Human adenosine A2A rec 100.0 2E-29 7E-34 231.9 11.1 141 39-187 20-161 (488)
12 3pbl_A D(3) dopamine receptor, 100.0 7.9E-30 2.7E-34 234.6 8.1 145 38-187 36-184 (481)
13 3v2y_A Sphingosine 1-phosphate 100.0 2.1E-29 7.1E-34 235.2 10.2 140 40-187 63-203 (520)
14 2z73_A Rhodopsin; visual pigme 100.0 3.3E-29 1.1E-33 229.2 10.2 216 36-264 30-278 (448)
15 4amj_A Beta-1 adrenergic recep 100.0 2E-29 6.9E-34 218.9 6.7 214 36-265 7-250 (315)
16 4eiy_A Adenosine receptor A2A/ 100.0 2.5E-29 8.7E-34 229.0 5.7 141 38-186 29-170 (447)
17 4ea3_A Fusion protein of nocic 100.0 4.1E-28 1.4E-32 221.2 13.5 202 36-265 121-355 (434)
18 3sn6_R Lysozyme, beta-2 adrene 99.9 3.6E-28 1.2E-32 226.3 4.3 139 38-182 180-319 (514)
19 1hll_A Alpha-2A adrenergic rec 98.6 7.2E-09 2.5E-13 58.1 1.3 31 131-161 2-32 (32)
20 2ki9_A Cannabinoid receptor 2; 97.9 8.2E-07 2.8E-11 49.9 -1.0 25 242-266 1-25 (33)
21 2lot_A Apelin receptor; membra 96.6 9.6E-05 3.3E-09 47.6 -2.4 26 42-67 30-55 (64)
No 1
>4grv_A Neurotensin receptor type 1, lysozyme chimera; G-protein coupled receptor, G-protein, signaling protein-agonist complex; HET: EPE; 2.80A {Rattus norvegicus}
Probab=100.00 E-value=1.2e-33 Score=263.22 Aligned_cols=147 Identities=22% Similarity=0.279 Sum_probs=129.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHhhcc-C---CCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCch
Q psy3988 38 SYDHYHGYISLFVCIFGIVANTLNIIVLTR-K---EMRSPTNSILTGLAIADLLVMLDYIPFTLHLNIMNKSKRDKFNYN 113 (283)
Q Consensus 38 ~~~~~~~~~~~i~~iigi~gN~lvl~vi~~-~---~lr~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~~ 113 (283)
....++.++|.+++++|++||+++++++.+ | ++|+++|+|++|||++|++++++.+|+.+...+ ...+.|.+|
T Consensus 30 ~~~v~~~~~~~~i~~~g~~gN~lvi~~i~~~~~~r~~~~~~n~~i~~La~aDll~~~~~~p~~~~~~~---~~~~~w~~g 106 (510)
T 4grv_A 30 YSKVLVTAIYLALFVVGTVGNSVTLFTLARKKSLQSLQSTVHYHLGSLALSDLLILLLAMPVELYNFI---WVHHPWAFG 106 (510)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTSCC----CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT---TCCSSCSSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhheeeecCCCCCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HhCCCEEhh
Confidence 345677889999999999999999988754 4 355789999999999999999999999887664 224669998
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheecccccceeeeccchhhhhhhhHHHHHHhHHHHHhhheeee
Q psy3988 114 WTMFVLFHSNFSQVCHTISIYLTVVLAIWRYIAVVYPQHNRQWCTMKTTTVTILVGYIVCPLLCLPIYVTSKLKS 188 (283)
Q Consensus 114 ~~~~c~~~~~~~~~~~~~s~~~l~~isidRyi~I~~P~~~~~~~t~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~ 188 (283)
+ ..|++..++..++..+|++++++||+|||++|++|++|+..++++++..+++++|++++++++|+++.+....
T Consensus 107 ~-~~C~~~~~~~~~~~~~S~~~l~~is~dRy~ai~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~ 180 (510)
T 4grv_A 107 D-AGCRGYYFLRDACTYATALNVASLSVARYLAICHPFKAKTLMSRSRTKKFISAIWLASALLAIPMLFTMGLQN 180 (510)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCCCCCCCCSCCHHHHHHHHHHHHHHHTTHHHHEEEEE
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHheEEEeccccccccccccccceeehHHHHHHHHHHHHHHHhhcccc
Confidence 7 6899999999999999999999999999999999999999999999999999999999999999998877553
No 2
>3uon_A Human M2 muscarinic acetylcholine, receptor T4 LY fusion protein; G protein-coupled receptor, GPCR, SI protein-antagonist complex; HET: QNB BGC; 3.00A {Homo sapiens} PDB: 4daj_A*
Probab=99.97 E-value=6.4e-31 Score=240.85 Aligned_cols=143 Identities=15% Similarity=0.175 Sum_probs=129.5
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHhhc-cCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHH
Q psy3988 38 SYDHYHGYISLFVCIFGIVANTLNIIVLT-RKEMRSPTNSILTGLAIADLLVMLDYIPFTLHLNIMNKSKRDKFNYNWTM 116 (283)
Q Consensus 38 ~~~~~~~~~~~i~~iigi~gN~lvl~vi~-~~~lr~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 116 (283)
....+..+++.+++++|++||+++++++. ++++|+++|+|++|||++|++.++..+|..+.... .+.|.++. .
T Consensus 21 ~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~-----~~~~~~~~-~ 94 (467)
T 3uon_A 21 FEVVFIVLVAGSLSLVTIIGNILVMVSIKVNRHLQTVNNYFLFSLACADLIIGVFSMNLYTLYTV-----IGYWPLGP-V 94 (467)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHHH-----SSSCCSCH-H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheeeeeecCccCchhHHHHHHHHHHHHHHHHHHHHHHHHHHh-----cCCccCCc-c
Confidence 34567788999999999999999998875 48889999999999999999999998998887776 56788886 6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhheecccccceeeeccchhhhhhhhHHHHHHhHHHHHhhhee
Q psy3988 117 FVLFHSNFSQVCHTISIYLTVVLAIWRYIAVVYPQHNRQWCTMKTTTVTILVGYIVCPLLCLPIYVTSKL 186 (283)
Q Consensus 117 ~c~~~~~~~~~~~~~s~~~l~~isidRyi~I~~P~~~~~~~t~~~~~~~i~~~W~~~~~~~~~~~~~~~~ 186 (283)
.|++..++..++..+|++++++||+|||++|++|++|+..++++++..+++++|++++++++|+++++..
T Consensus 95 ~C~~~~~~~~~~~~~s~~~l~~isidRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~ 164 (467)
T 3uon_A 95 VCDLWLALDYVVSNASVMNLLIISFDRYFCVTKPLTYPVKRTTKMAGMMIAAAWVLSFILWAPAILFWQF 164 (467)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTTSGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 8999999999999999999999999999999999999999999999999999999999999998877654
No 3
>3odu_A C-X-C chemokine receptor type 4, lysozyme chimera; structural genomics, PSI-2, protein structure initiative; HET: ITD OLC OLA; 2.50A {Homo sapiens} PDB: 3oe8_A* 3oe6_A* 3oe0_A* 3oe9_A* 2k03_B* 2k04_B 2k05_B*
Probab=99.97 E-value=3.8e-31 Score=244.63 Aligned_cols=145 Identities=21% Similarity=0.275 Sum_probs=129.3
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhHhhcc-CCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhH
Q psy3988 37 MSYDHYHGYISLFVCIFGIVANTLNIIVLTR-KEMRSPTNSILTGLAIADLLVMLDYIPFTLHLNIMNKSKRDKFNYNWT 115 (283)
Q Consensus 37 ~~~~~~~~~~~~i~~iigi~gN~lvl~vi~~-~~lr~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 115 (283)
.....+..+++.+++++|++||+++++++.+ +++|+++|+|++|||++|++.+ +.+|..+.... ..|.++.
T Consensus 45 ~~~~~~~~~~~~~i~~~g~~gN~lvi~~~~~~~~l~~~~~~~l~~La~~Dll~~-~~~p~~~~~~~------~~~~~~~- 116 (502)
T 3odu_A 45 NFNKIFLPTIYSIIFLTGIVGNGLVILVMGYQKKLRSMTDKYRLHLSVADLLFV-ITLPFWAVDAV------ANWYFGN- 116 (502)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCSCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHH------TCCCSHH-
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCHHHHHHHHHHHHHHHHH-HHHHHHHHHHh------cCCcCCc-
Confidence 4456778889999999999999999998865 8899999999999999999996 46898887773 4688887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheecccccceeeeccchhhhhhhhHHHHHHhHHHHHhhheeeec
Q psy3988 116 MFVLFHSNFSQVCHTISIYLTVVLAIWRYIAVVYPQHNRQWCTMKTTTVTILVGYIVCPLLCLPIYVTSKLKSR 189 (283)
Q Consensus 116 ~~c~~~~~~~~~~~~~s~~~l~~isidRyi~I~~P~~~~~~~t~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~ 189 (283)
..|++..++..++..+|++++++||+|||++|++|++|++.++++++..+++++|++++++++|++++......
T Consensus 117 ~~C~~~~~~~~~~~~~s~~~l~~is~dRy~ai~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~ 190 (502)
T 3odu_A 117 FLCKAVHVIYTVNLYSSVWILAFISLDRYLAIVHATNSQRPRKLLAEKVVYVGVWIPALLLTIPDFIFANVSEA 190 (502)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTSCHHHHHHHHHTHHHHHTHHHHHHTTHHHHHHEEEEEC
T ss_pred hhhhhHHHHHHHHHHHHHHHHHHHHHHHHhheecccccccccchhHHHHhhhHHHHHHHHHHHHHHHheeeecc
Confidence 57999999999999999999999999999999999999999999999999999999999999999887765543
No 4
>1u19_A Rhodopsin; G protein-coupled receptor, membrane protein, retinal protei photoreceptor, signaling protein; HET: MAN NAG BMA RET PLM HTO HTG; 2.20A {Bos taurus} SCOP: f.13.1.2 PDB: 1hzx_A* 1gzm_A* 1l9h_A* 2g87_A* 2hpy_A* 2i35_A* 2i36_A* 2i37_A* 2ped_A* 3oax_A* 3c9l_A* 1jfp_A* 1ln6_A* 1f88_A* 3cap_A* 3dqb_A* 3pqr_A* 3pxo_A* 3c9m_A* 2x72_A* ...
Probab=99.97 E-value=5.8e-30 Score=225.76 Aligned_cols=203 Identities=18% Similarity=0.173 Sum_probs=158.9
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhhHhhc-cCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchh
Q psy3988 36 QMSYDHYHGYISLFVCIFGIVANTLNIIVLT-RKEMRSPTNSILTGLAIADLLVMLDYIPFTLHLNIMNKSKRDKFNYNW 114 (283)
Q Consensus 36 ~~~~~~~~~~~~~i~~iigi~gN~lvl~vi~-~~~lr~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~~~ 114 (283)
.+....+..+++.+++++|++||+++++++. ++++|+++|++++|||++|++.++..+|..+.... .+.|.++.
T Consensus 34 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~Lai~Dll~~~~~~~~~~~~~~-----~~~~~~~~ 108 (349)
T 1u19_A 34 EPWQFSMLAAYMFLLIMLGFPINFLTLYVTVQHKKLRTPLNYILLNLAVADLFMVFGGFTTTLYTSL-----HGYFVFGP 108 (349)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSTTCCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHH-----HTSCTTHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhHHheEeehhhhhhhcCchhHHHHHHHHHHHHHHHhcchHHHHHHh-----cCeeeCCh
Confidence 4455667888899999999999999998875 58899999999999999999999998888876664 45688876
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheecccccceeeeccchhhhhhhhHHHHHHhHHHHHhhheeeecceeec
Q psy3988 115 TMFVLFHSNFSQVCHTISIYLTVVLAIWRYIAVVYPQHNRQWCTMKTTTVTILVGYIVCPLLCLPIYVTSKLKSRIVLLN 194 (283)
Q Consensus 115 ~~~c~~~~~~~~~~~~~s~~~l~~isidRyi~I~~P~~~~~~~t~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~ 194 (283)
..|++..++..++..+|++++++||+|||++|++|++|++ .+++++..+++++|++++++++|+++++.....+.
T Consensus 109 -~~C~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~-~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~--- 183 (349)
T 1u19_A 109 -TGCNLEGFFATLGGEIALWSLVVLAIERYVVVCKPMSNFR-FGENHAIMGVAFTWVMALACAAPPLVGWSRYIPEG--- 183 (349)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCSSSCC-CCHHHHHHHHHHHHHHHHHHHSGGGTTSSCCEEET---
T ss_pred -hHHHHHHHHHHHHHHHHHHHHHHHHHHHHheeeCCcccee-eccchhHHHHHHHHHHHHHHHHHHHHheeeeeccC---
Confidence 6899999999999999999999999999999999999987 68899999999999999999999887654322111
Q ss_pred cCCCCcCc---------------------------------cccccCCCCCCcccceeeeecCCCCceeeeecccccccc
Q psy3988 195 QLDNNAVN---------------------------------YSVHPGGNQSDHNVTLYDETNSYNATLYFIDLVDYNLTN 241 (283)
Q Consensus 195 ~~~~c~~~---------------------------------~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 241 (283)
....|..+ ..++...+++.++.. ....+.++
T Consensus 184 ~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~l~~~~~~~~----------------~~~~~~~~ 247 (349)
T 1u19_A 184 MQCSCGIDYYTPHEETNNESFVIYMFVVHFIIPLIVIFFCYGQLVFTVKEAAAQQQ----------------ESATTQKA 247 (349)
T ss_dssp TTTEEECCCSCCCGGGTHHHHHHHHHHHTTHHHHHHHHHHHTTTTTSSCSCCCSSC----------------SSSHHHHH
T ss_pred CceeecccccCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhc----------------cchhhHHH
Confidence 11112111 044444444333211 11224456
Q ss_pred hHhhhhHhhhhhhheehccCCcc
Q psy3988 242 EIKLSITLSILAGTKVTTMSPYM 264 (283)
Q Consensus 242 ~~k~~~~l~iiv~~F~icw~Py~ 264 (283)
++|++|++.+++++|++||+||.
T Consensus 248 ~~~~~~~~~~i~~~f~i~~~P~~ 270 (349)
T 1u19_A 248 EKEVTRMVIIMVIAFLICWLPYA 270 (349)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 78999999999999999999986
No 5
>2rh1_A Beta-2-adrenergic receptor/T4-lysozyme chimera; GPCR, 7TM, fusion, lipidic cubic phase, lipidic, mesophase, cholesterol, membrane protein; HET: MAL CAU CLR PLM 12P; 2.40A {Homo sapiens} PDB: 3p0g_A* 3d4s_A* 3ny8_A* 3ny9_A* 3nya_A* 3pds_A*
Probab=99.97 E-value=5.1e-31 Score=244.83 Aligned_cols=143 Identities=24% Similarity=0.363 Sum_probs=126.3
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhhHhhcc-CCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchh
Q psy3988 36 QMSYDHYHGYISLFVCIFGIVANTLNIIVLTR-KEMRSPTNSILTGLAIADLLVMLDYIPFTLHLNIMNKSKRDKFNYNW 114 (283)
Q Consensus 36 ~~~~~~~~~~~~~i~~iigi~gN~lvl~vi~~-~~lr~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~~~ 114 (283)
......++.+++.+++++|++||+++++++.+ +++|+++|+|++|||++|++.++..+|..+...+ .+.|.++.
T Consensus 36 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~~l~nLAiaDll~~~~~~p~~~~~~~-----~~~w~~~~ 110 (500)
T 2rh1_A 36 DEVWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHIL-----MKMWTFGN 110 (500)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHH-----HTSCCSHH
T ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCccCcccHHHHHHHHHHHHHHHHHHHHHHHHHHH-----hCCCcCCc
Confidence 34445667888999999999999999988864 8899999999999999999999988998887765 46788887
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheecccccceeeeccchhhhhhhhHHHHHHhHH-HHHhhh
Q psy3988 115 TMFVLFHSNFSQVCHTISIYLTVVLAIWRYIAVVYPQHNRQWCTMKTTTVTILVGYIVCPLLCL-PIYVTS 184 (283)
Q Consensus 115 ~~~c~~~~~~~~~~~~~s~~~l~~isidRyi~I~~P~~~~~~~t~~~~~~~i~~~W~~~~~~~~-~~~~~~ 184 (283)
..|++..++..++..+|++++++||+|||++|++|++|+++++++++..+++++|++++++++ |.++.+
T Consensus 111 -~~C~~~~~~~~~~~~~Si~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~~p~~~~~ 180 (500)
T 2rh1_A 111 -FWCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQMHW 180 (500)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTSCSSCHHHHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred -chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHeeccCcCCeeecccceeehhhHHHHHHHHHHhcchheee
Confidence 689999999999999999999999999999999999999989999999999999999999986 544443
No 6
>2lnl_A C-X-C chemokine receptor type 1; G protein coupled receptor, GPCR, membrane protei transmembrane, 7TM, phospholipid, signaling, signaling PROT; NMR {Homo sapiens}
Probab=99.96 E-value=1.9e-29 Score=218.45 Aligned_cols=212 Identities=15% Similarity=0.114 Sum_probs=148.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHhhc-cCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHH
Q psy3988 40 DHYHGYISLFVCIFGIVANTLNIIVLT-RKEMRSPTNSILTGLAIADLLVMLDYIPFTLHLNIMNKSKRDKFNYNWTMFV 118 (283)
Q Consensus 40 ~~~~~~~~~i~~iigi~gN~lvl~vi~-~~~lr~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~c 118 (283)
+.+..++|.+++++|++||+++++++. +|++|+++|+|+.|||++|++.++. +|...... ...|.+|+ ..|
T Consensus 11 ~~i~~i~y~ii~i~gv~gN~lvi~vi~~~~~lrt~~n~~i~nLAvaDll~~l~-~p~~~~~~------~~~~~~~~-~~c 82 (296)
T 2lnl_A 11 KYVVIIAYALVFLLSLLGNSLVMLVILYSRVGRSVTDVYLLNLALADLLFALT-LPIWAASK------VNGWIFGT-FLC 82 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCSTTHHHHHHHHHHHHHHHHH-HHHHHHHH------HSSSCCSS-HHH
T ss_pred HHhHHHHHHHHHHHHHHHHHHHHHHHHHccCCCChHHHHHHHHHHHHHHHHHh-hhHHHhhc------cCCCccch-hHH
Confidence 456778899999999999999998875 5999999999999999999999875 77776666 34688887 588
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhheecccccceeeeccchhhhhhhhHHHHHHhHHHHHhhheeeecceeeccCCC
Q psy3988 119 LFHSNFSQVCHTISIYLTVVLAIWRYIAVVYPQHNRQWCTMKTTTVTILVGYIVCPLLCLPIYVTSKLKSRIVLLNQLDN 198 (283)
Q Consensus 119 ~~~~~~~~~~~~~s~~~l~~isidRyi~I~~P~~~~~~~t~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (283)
+...++...+..+|++++++||+|||++|++|++|+... +++...+++++|+.++++++|+..+++.............
T Consensus 83 ~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~~~~-~~~~~~~~~~~W~~s~~~~~p~~~~~~~~~~~~~~~~~~~ 161 (296)
T 2lnl_A 83 KVVSLLKEVNFYSGILLLACISVDRYLAIVHATRTLTQK-RHLVKFVCLGCWGLSMNLSLPFFLFRQAYHPNNSSPVCYE 161 (296)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSCSSSSCCH-HHHHHHHHHHHHHHHHHHHHHHHHTSSCCCCCTTSCCCCS
T ss_pred HHHhhhhhhhHHHHHHHHHHHHhhhhhhhhhccccchhh-hhhhHheehHHHHHHHHHhcchhhcceeecCCCCCceeee
Confidence 888999999999999999999999999999999998754 4566777888999999999998887665433211111111
Q ss_pred CcCccccccCCCCCCcccceeee------ec---CCCCceeeeecccccccchHhhhhHhhhhhhheehccCCccc
Q psy3988 199 NAVNYSVHPGGNQSDHNVTLYDE------TN---SYNATLYFIDLVDYNLTNEIKLSITLSILAGTKVTTMSPYMT 265 (283)
Q Consensus 199 c~~~~~i~~~~~~~~~~~~~~~~------~~---~~~~~~~~~~~~~~~~~~~~k~~~~l~iiv~~F~icw~Py~~ 265 (283)
+.... ............. .. .........+..+...++++|++|++.+++++|++||+||+.
T Consensus 162 ~~~~~-----~~~~~~~~~~~~~~~~~~~p~~i~~~~y~~i~~~~~~~~~~~~~k~~~~~~~v~~~f~icw~P~~i 232 (296)
T 2lnl_A 162 VLGND-----TAKWRMVLRILPHTFGFIVPLFVMLFCYGFTLRTLFKAHMGQKHRAMRVIFAVVLIFLLCWLPYNL 232 (296)
T ss_dssp CCSCC-----TTTTTTHHHHTTTHHHHHHHHHHHHHHHHHHTTTSSSCCCHHHHTHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecccc-----chhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHHHHhhhheeeeehHHHH
Confidence 00000 0000000000000 00 000000000122334567889999999999999999999863
No 7
>4dkl_A MU-type opioid receptor, lysozyme chimera; G-protein coupled receptor, 7 transmembrane receptor, signal protein-antagonist complex; HET: BF0 CLR MPG 1PE; 2.80A {Mus musculus} PDB: 4ej4_A* 4djh_A*
Probab=99.96 E-value=6.2e-30 Score=233.96 Aligned_cols=144 Identities=21% Similarity=0.319 Sum_probs=128.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHhhcc-CCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHH
Q psy3988 38 SYDHYHGYISLFVCIFGIVANTLNIIVLTR-KEMRSPTNSILTGLAIADLLVMLDYIPFTLHLNIMNKSKRDKFNYNWTM 116 (283)
Q Consensus 38 ~~~~~~~~~~~i~~iigi~gN~lvl~vi~~-~~lr~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 116 (283)
....++.+++.+++++|++||+++++++.+ +++|+++|+|++|||++|++.++. +|..+.... .+.|.++. .
T Consensus 15 ~~~~~~~~~~~~~~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~-~p~~~~~~~-----~~~~~~~~-~ 87 (464)
T 4dkl_A 15 VTAITIMALYSIVCVVGLFGNFLVMYVIVRYTKMKTATNIYIFNLALADALATST-LPFQSVNYL-----MGTWPFGN-I 87 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-----HSSCCSCS-H
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHeehhhhhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHH-----hCCccccc-c
Confidence 345678889999999999999999988764 889999999999999999999987 888877765 45688886 6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhheecccccceeeeccchhhhhhhhHHHHHHhHHHHHhhheeee
Q psy3988 117 FVLFHSNFSQVCHTISIYLTVVLAIWRYIAVVYPQHNRQWCTMKTTTVTILVGYIVCPLLCLPIYVTSKLKS 188 (283)
Q Consensus 117 ~c~~~~~~~~~~~~~s~~~l~~isidRyi~I~~P~~~~~~~t~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~ 188 (283)
.|++..++..++..+|++++++||+|||++|++|++|+++++++++..+++++|++++++++|+++......
T Consensus 88 ~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~~W~~~~~~~~p~~~~~~~~~ 159 (464)
T 4dkl_A 88 LCKIVISIDYYNMFTSIFTLCTMSVDRYIAVCHPVKALDFRTPRNAKIVNVCNWILSSAIGLPVMFMATTKY 159 (464)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHSBCCEE
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccccHhHHhHHHHHHHHHHHHHHHHHheeecc
Confidence 899999999999999999999999999999999999999899999999999999999999999887655443
No 8
>3vw7_A Proteinase-activated receptor 1, lysozyme; high resolution structure, protease-activated receptor 1, in conformation, antagonist vorapaxar; HET: VPX OLC; 2.20A {Homo sapiens}
Probab=99.96 E-value=1.2e-29 Score=233.45 Aligned_cols=145 Identities=20% Similarity=0.301 Sum_probs=122.8
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHhhHhhcc-CCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhH
Q psy3988 37 MSYDHYHGYISLFVCIFGIVANTLNIIVLTR-KEMRSPTNSILTGLAIADLLVMLDYIPFTLHLNIMNKSKRDKFNYNWT 115 (283)
Q Consensus 37 ~~~~~~~~~~~~i~~iigi~gN~lvl~vi~~-~~lr~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~~~~ 115 (283)
.....+..+++.+++++|++||+++++++.+ +++|+++|+|++|||++|++.++. +|........ .+.|.++.
T Consensus 17 ~~~~~~~~~~~~~i~~~~i~gN~lvi~~~~~~~~l~~~~~~~l~~La~aDll~~~~-~~~~~~~~~~----~~~~~~~~- 90 (484)
T 3vw7_A 17 SWLTLFVPSVYTGVFVVSLPLNIMAIVVFILKMKVKKPAVVYMLHLATADVLFVSV-LPFKISYYFS----GSDWQFGS- 90 (484)
T ss_dssp HHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHHHTT-HHHHHHHHHT----TSCCCSCH-
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCHHHHHHHHHHHHHHHHHHH-HHHHHHHHHh----cCCcccch-
Confidence 4556678889999999999999999988764 889999999999999999999876 6665555531 34788886
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheecccccceeeeccchhhhhhhhHHHHHHhHHHHHhhheee
Q psy3988 116 MFVLFHSNFSQVCHTISIYLTVVLAIWRYIAVVYPQHNRQWCTMKTTTVTILVGYIVCPLLCLPIYVTSKLK 187 (283)
Q Consensus 116 ~~c~~~~~~~~~~~~~s~~~l~~isidRyi~I~~P~~~~~~~t~~~~~~~i~~~W~~~~~~~~~~~~~~~~~ 187 (283)
..|++..++..++..+|++++++||+|||++|++|++|+..++++++..+++++|++++++++|+++++...
T Consensus 91 ~~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~ 162 (484)
T 3vw7_A 91 ELCRFVTAAFYCNMYASILLMTVISIDRFLAVVYPMQSLSWRTLGRASFTCLAIWALAIAGVVPLLLKEQTI 162 (484)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----CCHHHHHHHHHHHHHHHHHHHHHHHTSCCEE
T ss_pred hHHhHHHHHHHHHHHHHHHHHHHHHHHHheEEEcccccccccchhHHHHHHHHHHHHHHHHHHHHHHhhhcc
Confidence 699999999999999999999999999999999999999989999999999999999999999998876654
No 9
>2ks9_A Substance-P receptor; water, autodock, NK1, neuropeptide receptor-NEU complex; NMR {Homo sapiens} PDB: 2ksa_A 2ksb_A
Probab=99.96 E-value=4.6e-29 Score=221.67 Aligned_cols=201 Identities=19% Similarity=0.227 Sum_probs=153.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHhhc-cCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHH
Q psy3988 40 DHYHGYISLFVCIFGIVANTLNIIVLT-RKEMRSPTNSILTGLAIADLLVMLDYIPFTLHLNIMNKSKRDKFNYNWTMFV 118 (283)
Q Consensus 40 ~~~~~~~~~i~~iigi~gN~lvl~vi~-~~~lr~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~c 118 (283)
..+..+++.+++++|++||+++++++. +|++|+++|++++|||++|++.++..+|..+.... .+.|.+++ ..|
T Consensus 32 ~~~~~~~~~~i~~~gi~gN~lvi~vi~~~~~l~~~~~~~l~~LaiaDll~~~~~~p~~~~~~~-----~~~~~~~~-~~C 105 (364)
T 2ks9_A 32 IVLWAAAYTVIVVTSVVGNVVVMWIILAHKRMRTVTNYFLVNLAFAEASMAAFNTVVNFTYAV-----HNEWYYGL-FYC 105 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCCCHHHHHHHHHHHHHHHHHHTHHHHHHHHHH-----HTSCSSCH-HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCccchH-HHH
Confidence 345578899999999999999998875 58899999999999999999999888888776664 45688876 689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhheecccccceeeeccchhhhhhhhHHHHHHhHHHHHhhheeeecceeeccCCC
Q psy3988 119 LFHSNFSQVCHTISIYLTVVLAIWRYIAVVYPQHNRQWCTMKTTTVTILVGYIVCPLLCLPIYVTSKLKSRIVLLNQLDN 198 (283)
Q Consensus 119 ~~~~~~~~~~~~~s~~~l~~isidRyi~I~~P~~~~~~~t~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 198 (283)
++..++..++..+|++++++||+|||++|++|++|+ .+++++..+++++|++++++++|.++........ ....
T Consensus 106 ~~~~~~~~~~~~~s~~~l~~isidRy~aI~~P~~~~--~~~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~----~~~~ 179 (364)
T 2ks9_A 106 KFHNFFPIAAVFASIYSMTAVAFDRYMAIIHPLQPR--LSATATKVVICVIWVLALLLAFPQGYYSTTETMP----SRVV 179 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCTTS--CCHHHHHHHHHHHHHHHHHHHTTTTTTSCCCBCT----TCSS
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccc--cccchHHHHHHHHHHHHHHHHhHHHHHhhheecC----CCCE
Confidence 999999999999999999999999999999999987 4888899999999999999999876554432221 1222
Q ss_pred CcCcc---------------------------------ccccCCCCCCcccceeeeecCCCCceeeeecccccccchHhh
Q psy3988 199 NAVNY---------------------------------SVHPGGNQSDHNVTLYDETNSYNATLYFIDLVDYNLTNEIKL 245 (283)
Q Consensus 199 c~~~~---------------------------------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 245 (283)
|..++ .++...+++.++.. . . +..+.+.++++|+
T Consensus 180 C~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~ii~~~y~~i~~~l~~~~~~~~------~--~-----~~~~~~~~~~~k~ 246 (364)
T 2ks9_A 180 CMIEWPEHPNKIYEKVYHICVTVLIYFLPLLVIGYAYTVVGITLWASEIPGD------S--S-----DRYHEQVSAKRKV 246 (364)
T ss_dssp BCCCCSCCCTTTTHHHHHHHHHHHHTHHHHHHHHHHHHHHHHSSCSCCCSSS------S--S-----SCSSHHHHHHHHH
T ss_pred EeecCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC------c--c-----hhhhhhHHhhhhH
Confidence 32211 22222322211111 0 0 0111245568899
Q ss_pred hhHhhhhhhheehccCCccc
Q psy3988 246 SITLSILAGTKVTTMSPYMT 265 (283)
Q Consensus 246 ~~~l~iiv~~F~icw~Py~~ 265 (283)
+|++.+++++|++||+||..
T Consensus 247 ~~~~~~v~~~f~~~~~P~~i 266 (364)
T 2ks9_A 247 VKMMIVVVCTFAICWLPFHI 266 (364)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999863
No 10
>3rze_A Histamine H1 receptor, lysozyme chimera; structural genomics, PSI-biology, membrane protein, GPCR NET GPCR, hydrolase; HET: 5EH D7V OLC; 3.10A {Homo sapiens}
Probab=99.96 E-value=1e-29 Score=231.84 Aligned_cols=139 Identities=22% Similarity=0.298 Sum_probs=125.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHhhcc-CCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHH
Q psy3988 40 DHYHGYISLFVCIFGIVANTLNIIVLTR-KEMRSPTNSILTGLAIADLLVMLDYIPFTLHLNIMNKSKRDKFNYNWTMFV 118 (283)
Q Consensus 40 ~~~~~~~~~i~~iigi~gN~lvl~vi~~-~~lr~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~c 118 (283)
..++.+++.+++++|++||+++++++.+ +++|+++|+|++|||++|++.++..+|..+.... .+.|.++. ..|
T Consensus 8 ~~~~~~~~~~~~~~gi~gN~~vi~~~~~~~~~~~~~~~~l~~La~~Dll~~~~~~p~~~~~~~-----~~~~~~~~-~~C 81 (452)
T 3rze_A 8 LMPLVVVLSTICLVTVGLNLLVLYAVRSERKLHTVGNLYIVSLSVADLIVGAVVMPMNILYLL-----MSKWSLGR-PLC 81 (452)
T ss_dssp -CGGGTHHHHHHHHHHHHHHHHHHHHHHCSTTCCGGGHHHHHHHHHHHHHHHTHHHHHHHHHH-----SSSCSSHH-HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCChhHHHHHHHHHHHHHHHHHHHHHHHHHHH-----cCCccCCc-hhH
Confidence 3456788999999999999999988754 8899999999999999999999999999888776 56788887 689
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhheecccccceeeeccchhhhhhhhHHHHHHhHHHHHhhh
Q psy3988 119 LFHSNFSQVCHTISIYLTVVLAIWRYIAVVYPQHNRQWCTMKTTTVTILVGYIVCPLLCLPIYVTS 184 (283)
Q Consensus 119 ~~~~~~~~~~~~~s~~~l~~isidRyi~I~~P~~~~~~~t~~~~~~~i~~~W~~~~~~~~~~~~~~ 184 (283)
++..++..++..+|++++++||+|||++|++|++|++.++++++..+++++|++++++++|.+...
T Consensus 82 ~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~p~~~~~ 147 (452)
T 3rze_A 82 LFWLSMDYVASTASIFSVFILCIDRYRSVQQPLRYLKYRTKTRASATILGAWFLSFLWVIPILGWN 147 (452)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCCTTTTSSHHHHHHHHHHHHHHHGGGHHHHHCCC
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHheeCccccccccchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999988865443
No 11
>3eml_A Human adenosine A2A receptor/T4 lysozyme chimera; caffeine, GPCR, membrane protein, LCP, mesophase, structural genomics, PSI-2; HET: ZMA STE; 2.60A {Homo sapiens} PDB: 3qak_A*
Probab=99.96 E-value=2e-29 Score=231.92 Aligned_cols=141 Identities=22% Similarity=0.231 Sum_probs=125.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhhHhhc-cCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHH
Q psy3988 39 YDHYHGYISLFVCIFGIVANTLNIIVLT-RKEMRSPTNSILTGLAIADLLVMLDYIPFTLHLNIMNKSKRDKFNYNWTMF 117 (283)
Q Consensus 39 ~~~~~~~~~~i~~iigi~gN~lvl~vi~-~~~lr~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~ 117 (283)
...+..+++.+++++|++||+++++++. ++++|+++|+|++|||++|++.++..+|..+... ..|.++. ..
T Consensus 20 ~~~~~~~~~~~i~~~gi~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~-------~~~~~~~-~~ 91 (488)
T 3eml_A 20 GSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS-------TGFCAAC-HG 91 (488)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSSHHHHHHHHHHHHHHHHHTHHHHHHHHT-------TCCEECH-HH
T ss_pred chhHHHHHHHHHHHHHHHHHHHhhhheeeccccCChHHHHHHHHHHHHHHHHHHHHHHHHHHh-------ccccccc-hH
Confidence 3456778999999999999999998875 4888999999999999999999999899887755 2566665 68
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhheecccccceeeeccchhhhhhhhHHHHHHhHHHHHhhheee
Q psy3988 118 VLFHSNFSQVCHTISIYLTVVLAIWRYIAVVYPQHNRQWCTMKTTTVTILVGYIVCPLLCLPIYVTSKLK 187 (283)
Q Consensus 118 c~~~~~~~~~~~~~s~~~l~~isidRyi~I~~P~~~~~~~t~~~~~~~i~~~W~~~~~~~~~~~~~~~~~ 187 (283)
|++..++..++..+|++++++||+|||++|++|++|+..++++++..+++++|++++++++|+++++...
T Consensus 92 C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~ 161 (488)
T 3eml_A 92 CLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNNC 161 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCGGGSTTTSCHHHHHHHHHHHHHHHHHHHTTGGGTCCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhheeEecccccccccCHHHHHHHHHHHHHHHHHHHHHHHhccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999888876543
No 12
>3pbl_A D(3) dopamine receptor, lysozyme chimera; structural genomics, PSI-2, PSI-biology, protein structure initiative; HET: ETQ MAL; 2.89A {Homo sapiens}
Probab=99.96 E-value=7.9e-30 Score=234.60 Aligned_cols=145 Identities=19% Similarity=0.283 Sum_probs=124.6
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHhhc-cCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHH
Q psy3988 38 SYDHYHGYISLFVCIFGIVANTLNIIVLT-RKEMRSPTNSILTGLAIADLLVMLDYIPFTLHLNIMNKSKRDKFNYNWTM 116 (283)
Q Consensus 38 ~~~~~~~~~~~i~~iigi~gN~lvl~vi~-~~~lr~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 116 (283)
....+..+++.+++++|++||+++++++. ++++|+++|+|++|||++|++.++..+|..+...+. .+.|.++. .
T Consensus 36 ~~~~~~~~~~~~~~~~g~~gN~lvi~~~~~~~~~~~~~~~~l~~La~aDll~~~~~~p~~~~~~~~----~~~~~~~~-~ 110 (481)
T 3pbl_A 36 RPHAYYALSYCALILAIVFGNGLVCMAVLKERALQTTTNYLVVSLAVADLLVATLVMPWVVYLEVT----GGVWNFSR-I 110 (481)
T ss_dssp -----CCSHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHTHHHHHHHHHT----TSCCCSCH-H
T ss_pred cchHHHHHHHHHHHHHHHHHHHHHhHHhhhccccCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCccccCc-c
Confidence 34556778899999999999999998875 488999999999999999999999989988876641 35688886 6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhheeccccc---ceeeeccchhhhhhhhHHHHHHhHHHHHhhheee
Q psy3988 117 FVLFHSNFSQVCHTISIYLTVVLAIWRYIAVVYPQHN---RQWCTMKTTTVTILVGYIVCPLLCLPIYVTSKLK 187 (283)
Q Consensus 117 ~c~~~~~~~~~~~~~s~~~l~~isidRyi~I~~P~~~---~~~~t~~~~~~~i~~~W~~~~~~~~~~~~~~~~~ 187 (283)
.|++..++..++..+|++++++||+|||++|++|++| .+..+++++..+++++|++++++++|+++++...
T Consensus 111 ~C~~~~~~~~~~~~~s~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~ 184 (481)
T 3pbl_A 111 CCDVFVTLDVMMCTASIWNLCAISIDRYTAVVMPVHYQHGTGQSSCRRVALMITAVWVLAFAVSCPLLFGFNTT 184 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHTTSSSCHHHHHHHHHHHHHHHHHHHHHHHTTTCCC
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHheeccc
Confidence 8999999999999999999999999999999999999 5667889999999999999999999988876653
No 13
>3v2y_A Sphingosine 1-phosphate receptor 1, lysozyme CHIM; EDG receptor, lipid receptor, multiple sclerosi autoimmunity, structural genomics, PSI-biology; HET: ML5 NAG; 2.80A {Homo sapiens} PDB: 3v2w_A*
Probab=99.96 E-value=2.1e-29 Score=235.16 Aligned_cols=140 Identities=16% Similarity=0.195 Sum_probs=119.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhHhhc-cCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHHHH
Q psy3988 40 DHYHGYISLFVCIFGIVANTLNIIVLT-RKEMRSPTNSILTGLAIADLLVMLDYIPFTLHLNIMNKSKRDKFNYNWTMFV 118 (283)
Q Consensus 40 ~~~~~~~~~i~~iigi~gN~lvl~vi~-~~~lr~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~c 118 (283)
..+..+++.+++++|++||+++++++. ++++|+++|+|++|||++|+++++..+|..+... ...|.++. ..|
T Consensus 63 ~~~~~~~~~~i~~~g~~gN~lvi~vi~~~~~lr~~~~~~l~nLA~aDll~~~~~~p~~~~~~------~~~~~~~~-~~c 135 (520)
T 3v2y_A 63 IKLTSVVFILICCFIILENIFVLLTIWKTKKFHRPMYYFIGNLALSDLLAGVAYTANLLLSG------ATTYKLTP-AQW 135 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSHHHHHHHHHHHHHHHHHHHHHHHHHHSG------GGGTTSCH-HHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCccccChHHHHHHHHHHHHHHHHHHHHHHHHHcc------ccceeeCc-ccc
Confidence 367788999999999999999998875 4889999999999999999999999888777654 45677776 578
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhheecccccceeeeccchhhhhhhhHHHHHHhHHHHHhhheee
Q psy3988 119 LFHSNFSQVCHTISIYLTVVLAIWRYIAVVYPQHNRQWCTMKTTTVTILVGYIVCPLLCLPIYVTSKLK 187 (283)
Q Consensus 119 ~~~~~~~~~~~~~s~~~l~~isidRyi~I~~P~~~~~~~t~~~~~~~i~~~W~~~~~~~~~~~~~~~~~ 187 (283)
.+..++..++.++|++++++||+|||++|+ |++|+..++++++..+++++|++++++++|+++++...
T Consensus 136 ~~~~~~~~~~~~~S~~~l~~isidRy~aI~-p~~~~~~~t~~~~~~~i~~~W~~s~~~~~~~~~~~~~~ 203 (520)
T 3v2y_A 136 FLREGSMFVALSASVFSLLAIAIERYITML-KMKLHNGSNNFRLFLLISACWVISLILGGLPIMGWNCI 203 (520)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHC-C-------CCHHHHHHHHHHHHHHHHHHHTTTTTCBCT
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHhhEEe-ccccccccchhHHHHHHHHHHHHHHHHHHHHHHeeccc
Confidence 999999999999999999999999999999 99999999999999999999999999999988877654
No 14
>2z73_A Rhodopsin; visual pigment, GQ-type, G-protein coupled receptor, chromophore, glycoprotein, lipoprotein, membrane, palmitate phosphorylation; HET: BOG RET PLM TWT PC1; 2.50A {Todarodes pacificus} PDB: 3aym_A* 3ayn_A* 2ziy_A*
Probab=99.96 E-value=3.3e-29 Score=229.16 Aligned_cols=216 Identities=15% Similarity=0.180 Sum_probs=162.4
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhhHhhc-cCCCcChHHHHHHHHHHHHHHHHHHH-HHHHHHHHHhhcccCCCCCch
Q psy3988 36 QMSYDHYHGYISLFVCIFGIVANTLNIIVLT-RKEMRSPTNSILTGLAIADLLVMLDY-IPFTLHLNIMNKSKRDKFNYN 113 (283)
Q Consensus 36 ~~~~~~~~~~~~~i~~iigi~gN~lvl~vi~-~~~lr~~~~~~l~~La~aDll~~~~~-~p~~~~~~~~~~~~~~~~~~~ 113 (283)
.......+.+++.+++++|++||+++++++. +|++|++.|++++|||++|++.+++. +|..+.... .+.|.++
T Consensus 30 ~~~~~~~~~i~~~ii~i~gi~gN~lvi~vi~~~~~~~~~~~~ll~~LaiaDll~~~~~~~p~~~~~~~-----~~~~~~~ 104 (448)
T 2z73_A 30 PDAVYYSLGIFIGICGIIGCGGNGIVIYLFTKTKSLQTPANMFIINLAFSDFTFSLVNGFPLMTISCF-----LKKWIFG 104 (448)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTCSTTHHHHHHHHHHHHHHHHHHSTTHHHHHHH-----TTSCCSH
T ss_pred CchHHHHHHHHHHHHHHHHHhhHHHhhhhhhhccccCCccchHHHHHHHHHHHHHHHHhccHHHHHHh-----cCCccCC
Confidence 3445667788899999999999999998875 48889999999999999999999874 787776654 4578887
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheecccccceeeeccchhhhhhhhHHHHHHhHHHHHhhheeeecceee
Q psy3988 114 WTMFVLFHSNFSQVCHTISIYLTVVLAIWRYIAVVYPQHNRQWCTMKTTTVTILVGYIVCPLLCLPIYVTSKLKSRIVLL 193 (283)
Q Consensus 114 ~~~~c~~~~~~~~~~~~~s~~~l~~isidRyi~I~~P~~~~~~~t~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~ 193 (283)
. ..|++..++..++..+|++++++||+|||++|++|++|+++++++++..+++++|++++++++++++.+.....+
T Consensus 105 ~-~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~s~~~~~~~~~~~~~~~~~--- 180 (448)
T 2z73_A 105 F-AACKVYGFIGGIFGFMSIMTMAMISIDRYNVIGRPMAASKKMSHRRAFIMIIFVWLWSVLWAIGPIFGWGAYTLE--- 180 (448)
T ss_dssp H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTCCCCCHHHHHHHHHHHHHHHHHHHSGGGGTSSCEEEC---
T ss_pred H-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccceechhHHHHHHHHHHHHHHHHHHHHHhceeeeeec---
Confidence 6 689999999999999999999999999999999999999989999999999999999999999887766543221
Q ss_pred ccCCCCcCcc-------------------------------ccccCCCCCCcccceeeeecCCCCceeeeecccccccch
Q psy3988 194 NQLDNNAVNY-------------------------------SVHPGGNQSDHNVTLYDETNSYNATLYFIDLVDYNLTNE 242 (283)
Q Consensus 194 ~~~~~c~~~~-------------------------------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (283)
.....|..++ .++...+++.+++. .......... .+......+++
T Consensus 181 ~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~lP~~ii~~~y~~I~~~l~~~~~~~~--~~~~~~~~~~--~~~~~~~~~~~ 256 (448)
T 2z73_A 181 GVLCNCSFDYISRDSTTRSNILCMFILGFFGPILIIFFCYFNIVMSVSNHEKEMA--AMAKRLNAKE--LRKAQAGANAE 256 (448)
T ss_dssp TTSSSEEECCSCCSHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHTTHHHHHHHHH--HHHTTTCCTT--HHHHHHHHHHH
T ss_pred CCceeEecccccCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHhhhhhHH--HHhhhccccHH
Confidence 1112232211 34444444444333 1111100000 00112234568
Q ss_pred HhhhhHhhhhhhheehccCCcc
Q psy3988 243 IKLSITLSILAGTKVTTMSPYM 264 (283)
Q Consensus 243 ~k~~~~l~iiv~~F~icw~Py~ 264 (283)
+|++|++.+++++|++||+|+.
T Consensus 257 ~k~~~~l~~iv~~F~i~~~P~~ 278 (448)
T 2z73_A 257 MRLAKISIVIVSQFLLSWSPYA 278 (448)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhHHHH
Confidence 8999999999999999999995
No 15
>4amj_A Beta-1 adrenergic receptor; membrane protein, 7TMR BETA1-adrenoceptor, stabilising mutat biased agonist; HET: CVD 2CV; 2.30A {Meleagris gallopavo} PDB: 2y01_A* 2y02_A* 2y03_A* 2y04_A* 4ami_A* 2y00_A* 2vt4_A* 2ycw_A* 2ycx_A* 2ycy_A* 2ycz_A*
Probab=99.95 E-value=2e-29 Score=218.85 Aligned_cols=214 Identities=21% Similarity=0.251 Sum_probs=158.0
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhhHhhc-cCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchh
Q psy3988 36 QMSYDHYHGYISLFVCIFGIVANTLNIIVLT-RKEMRSPTNSILTGLAIADLLVMLDYIPFTLHLNIMNKSKRDKFNYNW 114 (283)
Q Consensus 36 ~~~~~~~~~~~~~i~~iigi~gN~lvl~vi~-~~~lr~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~~~ 114 (283)
.+.......+++.+++++|++||+++++++. ++++|+++|+++.|||++|++.++..+|..+.... .+.|.+++
T Consensus 7 ~~~~~~~~~~~~~~~~~~gi~gN~lvi~~i~~~~~~~~~~~~ll~~LaiaDll~~~~~~p~~~~~~~-----~~~~~~~~ 81 (315)
T 4amj_A 7 SQQWEAGMSLLMALVVLLIVAGNVLVIAAIGSTQRLQTLTNLFITSLACADLVVGLLVVPFGATLVV-----RGTWLWGS 81 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHH-----HSSCCSCH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhchhhcchHHHHHHHHHHHHHHHHHHhccHHHHHHh-----cCCeeccc
Confidence 4455667888999999999999999998885 58889999999999999999998888898877665 45788886
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheecccccceeeeccchhhhhhhhHHHHHHhHHHHHhhheeeecc-eee
Q psy3988 115 TMFVLFHSNFSQVCHTISIYLTVVLAIWRYIAVVYPQHNRQWCTMKTTTVTILVGYIVCPLLCLPIYVTSKLKSRI-VLL 193 (283)
Q Consensus 115 ~~~c~~~~~~~~~~~~~s~~~l~~isidRyi~I~~P~~~~~~~t~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~-~~~ 193 (283)
..|++..++..++..+|.+++++||+|||++|++|++|++..+++++..++.++|+.+++++.|+++........ ...
T Consensus 82 -~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~P~~~~~~~~~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~ 160 (315)
T 4amj_A 82 -FLCELWTSLDVLCVTASIETLCVIAIDRYLAITSPFRYQSLMTRARAKVIICTVWAISALVSFLPIMMHWWRDEDPQAL 160 (315)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCCSHHHH
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccccccchhhHHHhhhHHHHHHHHHHHHHHHHHhccccCCCcc
Confidence 689999999999999999999999999999999999999989999999999999999999998776543222111 100
Q ss_pred c--cCCCC-cCcc-------------------------ccccCCCCCCcccceeeeecCCCCceeeeecccccccchHhh
Q psy3988 194 N--QLDNN-AVNY-------------------------SVHPGGNQSDHNVTLYDETNSYNATLYFIDLVDYNLTNEIKL 245 (283)
Q Consensus 194 ~--~~~~c-~~~~-------------------------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~ 245 (283)
. ....| .... .++...+++.++.. ....+ +..+...++++|+
T Consensus 161 ~c~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~i~~~~~~~~~~~~--~~~~~--------~~~~~~~~~~~k~ 230 (315)
T 4amj_A 161 KCYQDPGCCDFVTNRAYAIASSIISFYIPLLIMIFVALRVYREAKEQIRKID--RASKR--------KTSRVMLMREHKA 230 (315)
T ss_dssp HHHHCTTCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHTC----------------------CHHHHHHHHHH
T ss_pred ccccccccchhhcchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--ccccc--------ccchhhhhhhhhH
Confidence 0 11111 1100 33333333333322 11100 0112234578899
Q ss_pred hhHhhhhhhheehccCCccc
Q psy3988 246 SITLSILAGTKVTTMSPYMT 265 (283)
Q Consensus 246 ~~~l~iiv~~F~icw~Py~~ 265 (283)
+|++.+++++|++||+|++.
T Consensus 231 ~~~~~~~~~~f~i~~~P~~i 250 (315)
T 4amj_A 231 LKTLGIIMGVFTLCWLPFFL 250 (315)
T ss_dssp HHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999963
No 16
>4eiy_A Adenosine receptor A2A/soluble cytochrome B562 CH; novel protein engineering, GPCR network, PSI-biology, struct genomics, membrane protein, GPCR; HET: ZMA CLR OLA OLC OLB; 1.80A {Homo sapiens} PDB: 3vg9_A* 3vga_A* 2ydv_A* 2ydo_A* 3uza_A* 3rey_A* 3rfm_A* 3pwh_A* 3uzc_A* 4er9_A
Probab=99.95 E-value=2.5e-29 Score=228.97 Aligned_cols=141 Identities=22% Similarity=0.235 Sum_probs=125.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHhhc-cCCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHH
Q psy3988 38 SYDHYHGYISLFVCIFGIVANTLNIIVLT-RKEMRSPTNSILTGLAIADLLVMLDYIPFTLHLNIMNKSKRDKFNYNWTM 116 (283)
Q Consensus 38 ~~~~~~~~~~~i~~iigi~gN~lvl~vi~-~~~lr~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 116 (283)
....+..+++.+++++|++||+++++++. ++++|+++|+|++|||++|++.++..+|..+... ..|..+. .
T Consensus 29 ~~~~~~~~i~~~i~~~gi~gN~~vl~~~~~~~~l~~~~~~~l~~La~~Dll~~~~~~p~~~~~~-------~~~~~~~-~ 100 (447)
T 4eiy_A 29 MGSSVYITVELAIAVLAILGNVLVCWAVWLNSNLQNVTNYFVVSLAAADIAVGVLAIPFAITIS-------TGFCAAC-H 100 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCSHHHHHHHHHHHHHHHHHHTHHHHHHHHH-------TTCEEEH-H
T ss_pred CCcchHHHHHHHHHHHHHHHHHHHHHHHHHccccCcHHHHHHHHHHHHHHHHHHHHHHHHHHHh-------cccccCc-c
Confidence 33456778899999999999999998875 5888999999999999999999999899887755 2465665 6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhheecccccceeeeccchhhhhhhhHHHHHHhHHHHHhhhee
Q psy3988 117 FVLFHSNFSQVCHTISIYLTVVLAIWRYIAVVYPQHNRQWCTMKTTTVTILVGYIVCPLLCLPIYVTSKL 186 (283)
Q Consensus 117 ~c~~~~~~~~~~~~~s~~~l~~isidRyi~I~~P~~~~~~~t~~~~~~~i~~~W~~~~~~~~~~~~~~~~ 186 (283)
.|++..++..++..+|++++++||+|||++|++|++|+.+++++++..+++++|++++++++|+++++..
T Consensus 101 ~C~~~~~~~~~~~~~S~~~l~~is~dRy~aI~~P~~~~~~~~~~~~~~~i~~~Wi~s~~~~~~~~~~~~~ 170 (447)
T 4eiy_A 101 GCLFIACFVLVLTQSSIFSLLAIAIDRYIAIRIPLRYNGLVTGTRAKGIIAICWVLSFAIGLTPMLGWNN 170 (447)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHSCHHHHHHHHHHHHHHHHHHHTGGGGTCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHeEEecccccchhhhHHHHHHHHhHHHHHHHHHHHhhhheecc
Confidence 8999999999999999999999999999999999999999999999999999999999999988876653
No 17
>4ea3_A Fusion protein of nociceptin receptor and cytochr; PSI-biology GPCR network, structural genomics, GPCR membrane 7TM NOP ORL1 cytochrome B562; HET: 0NN OLB OLA OLC; 3.01A {Homo sapiens}
Probab=99.95 E-value=4.1e-28 Score=221.24 Aligned_cols=202 Identities=15% Similarity=0.127 Sum_probs=150.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHhhHhhcc-CCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchh
Q psy3988 36 QMSYDHYHGYISLFVCIFGIVANTLNIIVLTR-KEMRSPTNSILTGLAIADLLVMLDYIPFTLHLNIMNKSKRDKFNYNW 114 (283)
Q Consensus 36 ~~~~~~~~~~~~~i~~iigi~gN~lvl~vi~~-~~lr~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~~~ 114 (283)
......+..+++.+++++|++||+++++++.+ +++|+++|++++|||++|++.+ +.+|..+.... .+.|.++.
T Consensus 121 ~~~~~~~~~~~~~~i~~~gi~gN~lvi~~i~~~~~l~~~~~~ll~~LAvsDll~~-~~~p~~~~~~~-----~~~~~~~~ 194 (434)
T 4ea3_A 121 PLGLKVTIVGLYLAVCVGGLLGNCLVMYVILRHTKMKTATNIYIFNLALADTLVL-LTLPFQGTDIL-----LGFWPFGN 194 (434)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCCHHHHHHHHHHHHHHHHH-TTHHHHHHHHH-----HTSCTTHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHeeeeeeecCccCchhHHHHHHHHHHHHHHH-HHhHHHHHHHH-----hcCCcCcc
Confidence 34556677888999999999999999987754 8899999999999999999984 45888777665 45688876
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhheecccccceeeeccchhhhhhhhHHHHHHhHHHHHhhheeeecceeec
Q psy3988 115 TMFVLFHSNFSQVCHTISIYLTVVLAIWRYIAVVYPQHNRQWCTMKTTTVTILVGYIVCPLLCLPIYVTSKLKSRIVLLN 194 (283)
Q Consensus 115 ~~~c~~~~~~~~~~~~~s~~~l~~isidRyi~I~~P~~~~~~~t~~~~~~~i~~~W~~~~~~~~~~~~~~~~~~~~~~~~ 194 (283)
..|++..++..++..+|++++++||+|||++|++|++|++.++++++..+++++|++++++++|.++.........
T Consensus 195 -~~C~~~~~~~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~W~~s~~~~~p~~~~~~~~~~~~--- 270 (434)
T 4ea3_A 195 -ALCKTVIAIDYYNMFTSTFTLTAMSVDRYVAICHPIRALDVRTSSKAQAVNVAIWALASVVGVPVAIMGSAQVEDE--- 270 (434)
T ss_dssp -HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-------CHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCSS---
T ss_pred -cHHHHHHHHHHHHHHHHHHHHHHHHHHHHhEEEcccccccccchhhhHHhhhhhhhHHHHHHhhHheeeeeEeecC---
Confidence 6899999999999999999999999999999999999999999999999999999999999998877654432221
Q ss_pred cCCCCcCcc--------------------------------ccccCCCCCCcccceeeeecCCCCceeeeecccccccch
Q psy3988 195 QLDNNAVNY--------------------------------SVHPGGNQSDHNVTLYDETNSYNATLYFIDLVDYNLTNE 242 (283)
Q Consensus 195 ~~~~c~~~~--------------------------------~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (283)
...|.... .++...+++.++. ....+.+++
T Consensus 271 -~~~c~~~~~~~~~~~~~~~~~~~~~~~~~ip~~ii~~~y~~I~~~l~~~~~~~-----------------~~~~~~~~~ 332 (434)
T 4ea3_A 271 -EIECLVEIPTPQDYWGPVFAICIFLFSFIVPVLVISVCYSLMIRRLRGVRLLS-----------------GSREKDRNL 332 (434)
T ss_dssp -CCCEEECCCSSHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCSSCS-----------------SCHHHHHHH
T ss_pred -ceeEEEecCChHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc-----------------cchhhHHHH
Confidence 22232211 2222222111110 112245567
Q ss_pred HhhhhHhhhhhhheehccCCccc
Q psy3988 243 IKLSITLSILAGTKVTTMSPYMT 265 (283)
Q Consensus 243 ~k~~~~l~iiv~~F~icw~Py~~ 265 (283)
+|.++++.+++++|++||+|++.
T Consensus 333 ~~~~~~~~~vv~~F~i~w~P~~i 355 (434)
T 4ea3_A 333 RRITRLVLVVVAVFVGCWTPVQV 355 (434)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999864
No 18
>3sn6_R Lysozyme, beta-2 adrenergic receptor; seven transmembrane receptor, nanobody, G protein-coupled RE GPCR, signal transduction, G protein signaling; HET: P0G; 3.20A {Enterobacteria phage T4} PDB: 3kj6_A 2r4s_A 2r4r_A 4gbr_A*
Probab=99.94 E-value=3.6e-28 Score=226.25 Aligned_cols=139 Identities=24% Similarity=0.348 Sum_probs=124.2
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhHhhcc-CCCcChHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccCCCCCchhHH
Q psy3988 38 SYDHYHGYISLFVCIFGIVANTLNIIVLTR-KEMRSPTNSILTGLAIADLLVMLDYIPFTLHLNIMNKSKRDKFNYNWTM 116 (283)
Q Consensus 38 ~~~~~~~~~~~i~~iigi~gN~lvl~vi~~-~~lr~~~~~~l~~La~aDll~~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 116 (283)
.......+++.+++++|++||+++++++.+ +++|+++|++++|||++|++.++..+|..+.... .+.|.++. .
T Consensus 180 ~~~~~~~i~~~ii~~~gi~gN~lvi~vi~~~~~lr~~~~~ll~nLAiaDll~~~~~~p~~~~~~~-----~~~~~~~~-~ 253 (514)
T 3sn6_R 180 VWVVGMGIVMSLIVLAIVFGNVLVITAIAKFERLQTVTNYFITSLACADLVMGLAVVPFGAAHIL-----TKTWTFGN-F 253 (514)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHTTTTTHHHHHHHHHH-----HTSCCSCS-H
T ss_pred hHHHHHHHHHHHHHHHHHHhHHHhhhheecccccccHHHHHHHHHHHHHHHHHHHhCHHHHHHHH-----cCCeeCCc-c
Confidence 345567888999999999999999987754 8889999999999999999999988998887775 45788887 6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhheecccccceeeeccchhhhhhhhHHHHHHhHHHHHh
Q psy3988 117 FVLFHSNFSQVCHTISIYLTVVLAIWRYIAVVYPQHNRQWCTMKTTTVTILVGYIVCPLLCLPIYV 182 (283)
Q Consensus 117 ~c~~~~~~~~~~~~~s~~~l~~isidRyi~I~~P~~~~~~~t~~~~~~~i~~~W~~~~~~~~~~~~ 182 (283)
.|++..++..++..+|++++++||+|||++|++|++|+.+++++++..+++++|+++++++++++.
T Consensus 254 ~C~~~~~l~~~~~~~S~~~l~~isidRy~aI~~Pl~~~~~~t~~~~~~~i~~~Wi~s~l~~~~p~~ 319 (514)
T 3sn6_R 254 WCEFWTSIDVLCVTASIETLCVIAVDRYFAITSPFKYQSLLTKNKARVIILMVWIVSGLTSFLPIQ 319 (514)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHCCHHHHHHHHHHHHHHHHHTTHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcCCccccchhccchHHHHHHHHHHHHHHHHHhhhhh
Confidence 899999999999999999999999999999999999999899999999999999999999875543
No 19
>1hll_A Alpha-2A adrenergic receptor; helix-linker-helix, membrane protein; NMR {Synthetic} SCOP: j.94.1.1 PDB: 1hof_A 1ho9_A 1hod_A
Probab=98.63 E-value=7.2e-09 Score=58.08 Aligned_cols=31 Identities=16% Similarity=0.087 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHHhheecccccceeeeccc
Q psy3988 131 ISIYLTVVLAIWRYIAVVYPQHNRQWCTMKT 161 (283)
Q Consensus 131 ~s~~~l~~isidRyi~I~~P~~~~~~~t~~~ 161 (283)
+|++++++||+|||++|++|++|+..+++++
T Consensus 2 ~Si~~L~~is~dRy~aI~~Pl~~~~~~t~~~ 32 (32)
T 1hll_A 2 SSIVHLCAISLDRYWSITQAIEYNLKRTPRR 32 (32)
T ss_dssp HHHHHHHHHHTHHHHHHHHHHGGGSSCCCCC
T ss_pred cHHHHHHHHHHHHHHHhhhhhhcccccCCCC
Confidence 6899999999999999999999988777653
No 20
>2ki9_A Cannabinoid receptor 2; GPCR, G-protein coupled receptor, membrane protein; NMR {Synthetic}
Probab=97.91 E-value=8.2e-07 Score=49.86 Aligned_cols=25 Identities=16% Similarity=0.332 Sum_probs=21.9
Q ss_pred hHhhhhHhhhhhhheehccCCcccc
Q psy3988 242 EIKLSITLSILAGTKVTTMSPYMTR 266 (283)
Q Consensus 242 ~~k~~~~l~iiv~~F~icw~Py~~~ 266 (283)
|+|++|++.+++++|.+||+||+.-
T Consensus 1 e~k~~k~l~~vv~~F~icW~P~~i~ 25 (33)
T 2ki9_A 1 DVRLAKTLGLVLAVLLICWFPVLAL 25 (33)
T ss_dssp CCSSSSHHHHHHHHHTTTSSHHHHH
T ss_pred CchhhhhHHHHHHHHHHHHhHHHHH
Confidence 4688899999999999999999753
No 21
>2lot_A Apelin receptor; membrane protein; NMR {Homo sapiens} PDB: 2lou_A 2lov_A 2low_A
Probab=96.62 E-value=9.6e-05 Score=47.60 Aligned_cols=26 Identities=23% Similarity=0.317 Sum_probs=23.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhHhhcc
Q psy3988 42 YHGYISLFVCIFGIVANTLNIIVLTR 67 (283)
Q Consensus 42 ~~~~~~~i~~iigi~gN~lvl~vi~~ 67 (283)
++.++|.+++++|++||+++++++.+
T Consensus 30 ~lp~~Y~lvFvlGl~GN~lvl~v~~~ 55 (64)
T 2lot_A 30 LIPAIYMLVFLLGTTGNGLVLWTVFR 55 (64)
T ss_dssp SSHHHHHHTTTTTTTSSSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhhhheeeeeE
Confidence 66789999999999999999998854
Done!