BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3994
(282 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|321462197|gb|EFX73222.1| hypothetical protein DAPPUDRAFT_14394 [Daphnia pulex]
Length = 263
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/270 (68%), Positives = 225/270 (83%), Gaps = 9/270 (3%)
Query: 10 ELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSL 69
+LSSLYD KPPISKAK+TAIT+ AI+A+KFYKHVVQSVEKF+ KC+PEYK+P LYVIDS+
Sbjct: 1 QLSSLYDMKPPISKAKMTAITKGAIKAVKFYKHVVQSVEKFLQKCRPEYKIPGLYVIDSI 60
Query: 70 VRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIH 128
VRQSRHQF DKDVF PRF++N+ TF +YQC E+KSK+IRVLNLWQKN VF P++I
Sbjct: 61 VRQSRHQFGADKDVFAPRFSKNVTYTFYFIYQCTGEEKSKVIRVLNLWQKNAVFPPEVIQ 120
Query: 129 PLFDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSI 188
PLFDMAD + P ++ A ++CSTTLW+GHLSKLVQ+EELSDTFG+YG+++SI
Sbjct: 121 PLFDMADSSLPPTKKEAL--------SVCSTTLWVGHLSKLVQQEELSDTFGQYGEILSI 172
Query: 189 NLIPPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDG 248
+LIPPRGCAFVCM+RRQDA +AL KL KLQGK ITLAWAPGKG+K K+WKDFWEV G
Sbjct: 173 DLIPPRGCAFVCMHRRQDAYRALTKLAGHKLQGKAITLAWAPGKGVKAKEWKDFWEVDQG 232
Query: 249 VSYIPYDRLSKEIDYDYLEDGGVFDEDTVP 278
VSY+P+ RLS+ D + LE+GG FDE+T+P
Sbjct: 233 VSYVPWQRLSQMTDLEALEEGGSFDEETLP 262
>gi|443715596|gb|ELU07509.1| hypothetical protein CAPTEDRAFT_122321, partial [Capitella teleta]
Length = 274
Score = 312 bits (800), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 146/274 (53%), Positives = 197/274 (71%), Gaps = 11/274 (4%)
Query: 10 ELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSL 69
+LSS+ + +PPIS+AK+ AIT+SAI+ IKFYKH+VQSVEKFI K +PE+KVP LYV+DS+
Sbjct: 1 QLSSVCEARPPISRAKMAAITKSAIKGIKFYKHIVQSVEKFIHKGRPEFKVPGLYVMDSI 60
Query: 70 VRQSRHQFQ-DKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIH 128
VRQSRHQF +KDVFGPRF++N+ TFQ L+QC +D+SK+IRVLNLWQKN VF P +I
Sbjct: 61 VRQSRHQFSSEKDVFGPRFSKNIVRTFQFLFQCKGDDRSKVIRVLNLWQKNSVFPPAVIQ 120
Query: 129 PLFDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSI 188
PL D+A + + +CSTT+WIGHLSK ++ + D YG+V S+
Sbjct: 121 PLLDLATDPTSTEKHMT----------VCSTTIWIGHLSKNTTQDNIMDEMVNYGEVHSV 170
Query: 189 NLIPPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDG 248
NL+PPRGCA+VC++ R+DA++AL KLK KL G T+ +AWA KG+ + WK W+V G
Sbjct: 171 NLVPPRGCAYVCLSSRKDASRALSKLKGVKLLGNTLKVAWATNKGILESKWKHLWDVDQG 230
Query: 249 VSYIPYDRLSKEIDYDYLEDGGVFDEDTVPLWLK 282
++IP+D L I D L +GGV D +T+P L+
Sbjct: 231 STFIPWDDLPDNISLDELTEGGVIDPETIPKRLR 264
>gi|391327585|ref|XP_003738278.1| PREDICTED: uncharacterized protein LOC100908485 [Metaseiulus
occidentalis]
Length = 657
Score = 305 bits (780), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 146/286 (51%), Positives = 204/286 (71%), Gaps = 12/286 (4%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +K FN EL +LY+++PP+SKAK+T IT+ A++ +K YKHVV +VEKFI KCKPEYKV
Sbjct: 7 MEEVKAFNAELQTLYESRPPVSKAKMTDITKRAMKGVKLYKHVVHTVEKFIHKCKPEYKV 66
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF +KDVF PRF +N+K TFQ L +CP + + KI+RVLNLWQKN
Sbjct: 67 PGLYVIDSIVRQSRHQFGSEKDVFAPRFQKNIKNTFQSLMRCPDDQRPKIVRVLNLWQKN 126
Query: 120 EVFTPDIIHPLFDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTF 179
VF ++ L ++ + L + R G +CS TLW+GH+SK E +L +F
Sbjct: 127 GVFPTEVTQMLHEV------VASCLPAV--RRGYITVCSNTLWLGHVSKATTESDLEASF 178
Query: 180 GEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKLQGKT--ITLAWAPGKGMKD- 236
GE+G ++SI+LIPPRGCA++CM+RRQDA + L +N +L+ I +AWAP KG K+
Sbjct: 179 GEHGKILSIDLIPPRGCAYICMDRRQDAYRTLVNKRNIRLKNSPSRIKIAWAPHKGAKNH 238
Query: 237 KDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDEDTVPLWLK 282
K++KD+W+V G +IP D++ ++D LE+GG+ D D++P LK
Sbjct: 239 KNFKDYWDVDQGCFFIPDDQMPLDVDLAQLEEGGMIDVDSLPDSLK 284
>gi|260790611|ref|XP_002590335.1| hypothetical protein BRAFLDRAFT_264027 [Branchiostoma floridae]
gi|229275527|gb|EEN46346.1| hypothetical protein BRAFLDRAFT_264027 [Branchiostoma floridae]
Length = 263
Score = 293 bits (750), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 140/256 (54%), Positives = 186/256 (72%), Gaps = 15/256 (5%)
Query: 26 ITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRHQF-QDKDVFG 84
+TA+T++AI+AIKFYKHVVQSVEKFI KC+PEYKVP LYVIDS+VRQSRHQF DKDVF
Sbjct: 1 MTAVTKAAIKAIKFYKHVVQSVEKFIQKCRPEYKVPGLYVIDSIVRQSRHQFGADKDVFA 60
Query: 85 PRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHPLFDMADPNHPIHREL 144
PRFA+N+ TFQHL++CPPED+++++RVLNLWQKN VF ++I PL DMADP
Sbjct: 61 PRFAKNVTLTFQHLFKCPPEDRARVVRVLNLWQKNHVFKVEVIQPLLDMADP-------- 112
Query: 145 AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRR 204
+ ++ +CSTTLW+GHL K + EL + F G V SI+LIPPRGCA+VC R
Sbjct: 113 ---ERAKQMQPVCSTTLWVGHLDKKTTDVELRNIFEAIGPVQSIDLIPPRGCAYVCYETR 169
Query: 205 QDAAKALYKLKNTKLQGKT--ITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEID 262
DA AL KLKN ++ + + +AWAPGKG+K K+ K +W+ G +Y+P+++L + D
Sbjct: 170 LDAHNALNKLKNLRVGNRQQPVQMAWAPGKGVKGKEHKQYWDDHAGTTYLPWEKLEGK-D 228
Query: 263 YDYLEDGGVFDEDTVP 278
+ L +GG D +T+P
Sbjct: 229 LESLAEGGYIDNETLP 244
>gi|47227869|emb|CAG09032.1| unnamed protein product [Tetraodon nigroviridis]
Length = 262
Score = 275 bits (704), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 142/271 (52%), Positives = 189/271 (69%), Gaps = 15/271 (5%)
Query: 10 ELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSL 69
+L S+ D KPPIS+AK+ ++T++AI+AIK YKHVVQ VEKFI KCKPE KVP LYV+DS+
Sbjct: 1 KLFSMIDMKPPISRAKMMSVTKAAIKAIKLYKHVVQIVEKFIKKCKPELKVPGLYVVDSI 60
Query: 70 VRQSRHQFQ-DKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIH 128
VRQSRHQF DKDVFGPRF +N TFQ+LY CP EDK+KI+RVL+LWQKN VF +++
Sbjct: 61 VRQSRHQFGVDKDVFGPRFQKNFTDTFQNLYHCPEEDKNKIVRVLHLWQKNGVFDINLLQ 120
Query: 129 PLFDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSI 188
L DMA+ N + N VE +CSTTLWIG L K Q+ ++ E+G + SI
Sbjct: 121 SLLDMANGNK---------TSPNIVE-VCSTTLWIGQLDKKTQQSDVVSLLEEFGQIESI 170
Query: 189 NLIPPRGCAFVCMNRRQDAAKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQ 246
N+IPPRGCA++ M RQDA AL KL + ++ K + +A A KG+K K FW+V+
Sbjct: 171 NMIPPRGCAYIVMVHRQDAYTALNKLSRGSYRVNQKPVKIACALNKGIKSTH-KKFWDVE 229
Query: 247 DGVSYIPYDRLSKEIDYDYLEDGGVFDEDTV 277
GV+YIP+ ++ E D + ++GG+ D DT+
Sbjct: 230 QGVTYIPWTKVRVE-DLESYQEGGILDADTL 259
>gi|91094229|ref|XP_967119.1| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
gi|270016224|gb|EFA12670.1| hypothetical protein TcasGA2_TC010693 [Tribolium castaneum]
Length = 1145
Score = 246 bits (629), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 115/153 (75%), Positives = 132/153 (86%), Gaps = 1/153 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD +K FN ELSSLY+ KPPISKAK+TAITR AI+AIKFYKHVVQSVEKFI+KCKPEYKV
Sbjct: 1 MDAVKAFNAELSSLYEVKPPISKAKMTAITRGAIKAIKFYKHVVQSVEKFILKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVF PRFA+N++ TF +L+ CP EDKSKIIRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGADKDVFAPRFAKNMRQTFINLFLCPAEDKSKIIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPNHPIHRELAEIQARNG 152
+VF P++I PLFD+ADPN+PIH+EL NG
Sbjct: 121 QVFAPEVIQPLFDLADPNNPIHKELGTPMQSNG 153
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 87/128 (67%), Positives = 108/128 (84%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+GHLSKLV +E+LS+TFGE+GD+VSI+LIPPRGCAF+ M+RRQDAA+ L KL
Sbjct: 461 SVCSTTLWVGHLSKLVHQEDLSNTFGEFGDIVSIDLIPPRGCAFIVMHRRQDAARCLTKL 520
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDE 274
KN L GK ITLAWAPGKG+K KD KD+WE GVSYIP+ +L +ID + LEDGG+ DE
Sbjct: 521 KNHLLHGKAITLAWAPGKGVKGKDLKDYWEGDLGVSYIPWSKLKPDIDIEMLEDGGMIDE 580
Query: 275 DTVPLWLK 282
DT+P W+K
Sbjct: 581 DTMPPWMK 588
>gi|242024705|ref|XP_002432767.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518252|gb|EEB20029.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 1343
Score = 244 bits (622), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 116/162 (71%), Positives = 135/162 (83%), Gaps = 4/162 (2%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD +K FN ELS+LY+ KPPISKAK+++ITRSAI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MDAVKAFNNELSALYEVKPPISKAKMSSITRSAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKD+F PRFA+N++ TF +L+ CPPEDK KIIRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGPDKDLFAPRFAKNMQNTFANLFNCPPEDKGKIIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFD-MADPNHPIHRELAEIQARNGVENMCSTT 160
VFTPD+I PLFD +ADPN+PIHRE + A NG+ T
Sbjct: 121 SVFTPDVIQPLFDQLADPNNPIHRE--NLAASNGLNTSAGHT 160
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 88/124 (70%), Positives = 111/124 (89%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+GHLSKLVQ+EELSDTFGE+GD+VSI++IPPRGCAF+CMNRRQDAA+AL +L
Sbjct: 490 SVCSTTLWVGHLSKLVQQEELSDTFGEFGDIVSIDVIPPRGCAFICMNRRQDAARALTRL 549
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDE 274
K+ KL GK I LAWAPGKG+K +D+KD+WE+ GVSYIP++RLSK+ D+ LE+GG DE
Sbjct: 550 KDHKLHGKNIMLAWAPGKGVKGRDYKDYWEIDLGVSYIPWNRLSKKTDFVALEEGGSLDE 609
Query: 275 DTVP 278
DT+P
Sbjct: 610 DTMP 613
>gi|170050233|ref|XP_001859912.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167871912|gb|EDS35295.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1014
Score = 239 bits (609), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 108/142 (76%), Positives = 125/142 (88%), Gaps = 1/142 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD ++ FNQELS LY+ KPPISKAK+ +ITRSA++AIKFYKHVVQSVEKFI KCK EYK+
Sbjct: 1 MDTVRIFNQELSGLYEAKPPISKAKMASITRSAMKAIKFYKHVVQSVEKFISKCKSEYKI 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF +KDVF PRFARN++ATF HL++CPPEDKSKIIRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTEKDVFAPRFARNMEATFAHLFRCPPEDKSKIIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPNHPIH 141
VF P+ I PLFD+A+P HPIH
Sbjct: 121 MVFAPETIQPLFDLANPEHPIH 142
Score = 197 bits (500), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 82/127 (64%), Positives = 110/127 (86%)
Query: 156 MCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLK 215
+CSTTLW+GHLSKLVQ+EELSDTFG+YGD+VSI+LIPPRGCAF+ MNRRQDA K++ LK
Sbjct: 514 VCSTTLWVGHLSKLVQQEELSDTFGKYGDIVSIDLIPPRGCAFIVMNRRQDAHKSMQSLK 573
Query: 216 NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDED 275
N K+ G+TIT++WA GKG+K K+WKD+W+++ G SYIP+ ++S D + LE+GG+FD++
Sbjct: 574 NHKMHGRTITISWATGKGVKSKEWKDYWDIELGCSYIPWSKVSHATDLEALEEGGMFDDE 633
Query: 276 TVPLWLK 282
T+P WLK
Sbjct: 634 TMPQWLK 640
>gi|347969782|ref|XP_314272.5| AGAP003369-PA [Anopheles gambiae str. PEST]
gi|333469268|gb|EAA09643.5| AGAP003369-PA [Anopheles gambiae str. PEST]
Length = 1392
Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats.
Identities = 106/144 (73%), Positives = 130/144 (90%), Gaps = 1/144 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ ++ FNQELS LY++KPPISKAK+ +ITRSA++AIKFYKHVVQSVEKFI KCK EYK+
Sbjct: 1 METVRVFNQELSGLYESKPPISKAKMASITRSAMKAIKFYKHVVQSVEKFIQKCKCEYKI 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF +KDVF PRFARN+++TF HL++CPPEDKSKIIRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGPEKDVFAPRFARNMESTFAHLFRCPPEDKSKIIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPNHPIHRE 143
VF P++I PLFD+A+P+HPIH++
Sbjct: 121 MVFLPEVIQPLFDLANPDHPIHQQ 144
Score = 201 bits (511), Expect = 3e-49, Method: Composition-based stats.
Identities = 85/128 (66%), Positives = 110/128 (85%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+GHLSKLVQ+EELSDTFG+YGD+VSI++IPPRGCAF+ MNRRQDA K + L
Sbjct: 451 SVCSTTLWVGHLSKLVQQEELSDTFGKYGDIVSIDMIPPRGCAFIVMNRRQDAFKCMQSL 510
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDE 274
KN K+ G+TIT++WA GKG+K K+WKD+W++ GVSYIP+ +LS D + LEDGG+FDE
Sbjct: 511 KNHKMHGRTITISWAAGKGVKSKEWKDYWDLDLGVSYIPWSKLSPSTDLETLEDGGMFDE 570
Query: 275 DTVPLWLK 282
DT+P W+K
Sbjct: 571 DTIPQWMK 578
>gi|307198209|gb|EFN79224.1| Putative RNA-binding protein 16 [Harpegnathos saltator]
Length = 1633
Score = 237 bits (604), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 108/144 (75%), Positives = 126/144 (87%), Gaps = 1/144 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD +K FN ELS+LYD KPPISKAK+ ++TR AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MDAVKAFNAELSALYDVKPPISKAKMNSLTRGAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF +KDVF PRFA+N++ TF +L +CP EDKSK+IRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGMEKDVFAPRFAKNMQNTFLNLLKCPQEDKSKVIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPNHPIHRE 143
VF P++I PLFD+ADPNHPIH+E
Sbjct: 121 AVFPPEVIQPLFDLADPNHPIHKE 144
Score = 204 bits (519), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 91/130 (70%), Positives = 113/130 (86%), Gaps = 2/130 (1%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+GHLSKLV +EELSDTFGE+GD+VSI+LIPPRGCAF+CMNRRQDA +AL KL
Sbjct: 544 SVCSTTLWVGHLSKLVHQEELSDTFGEFGDIVSIDLIPPRGCAFICMNRRQDAYRALTKL 603
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEID--YDYLEDGGVF 272
KN K+QGK ITLAWAPGKG+K K+WKD+WEV+ GVSYIP+++L+ D + LE+GG+
Sbjct: 604 KNHKMQGKAITLAWAPGKGVKGKEWKDYWEVELGVSYIPWNKLTNITDQELELLEEGGMI 663
Query: 273 DEDTVPLWLK 282
DEDT+P LK
Sbjct: 664 DEDTLPPSLK 673
>gi|307171350|gb|EFN63248.1| Putative RNA-binding protein 16 [Camponotus floridanus]
Length = 779
Score = 235 bits (600), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/159 (69%), Positives = 131/159 (82%), Gaps = 3/159 (1%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD +K+FN ELS+LYD KPPISKAK+ ++TR AI+AIKFYKHVVQSVEKFI KCK EYKV
Sbjct: 1 MDAVKSFNAELSALYDVKPPISKAKMNSLTRGAIKAIKFYKHVVQSVEKFIQKCKAEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF +KDVF PRFA+N++ TF +L +CP EDKSK+IRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGMEKDVFAPRFAKNMQTTFLNLLKCPQEDKSKVIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPNHPIHRELAEIQARNGVENMCS 158
VF P++I PLFD+ADPNHPIH+E + NG N S
Sbjct: 121 AVFPPEVIQPLFDLADPNHPIHKE--QPVNSNGTLNTSS 157
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 91/130 (70%), Positives = 111/130 (85%), Gaps = 2/130 (1%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+GHLSKLV +EELSDTFGE GD+VSI+LI PRGCAF+CMNRRQDA +AL KL
Sbjct: 542 SVCSTTLWVGHLSKLVHQEELSDTFGELGDIVSIDLISPRGCAFICMNRRQDAYRALTKL 601
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYD--YLEDGGVF 272
KN K+QGK ITLAWAPGKG+K K+WKD+WEV+ GVSYIP+++L D D LE+GG+
Sbjct: 602 KNHKMQGKAITLAWAPGKGVKGKEWKDYWEVELGVSYIPWNKLINITDQDLELLEEGGMI 661
Query: 273 DEDTVPLWLK 282
DEDT+P +LK
Sbjct: 662 DEDTLPPYLK 671
>gi|328793122|ref|XP_392804.4| PREDICTED: hypothetical protein LOC409283 [Apis mellifera]
Length = 1479
Score = 235 bits (600), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 112/161 (69%), Positives = 132/161 (81%), Gaps = 3/161 (1%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +K FN ELS+LYD KPPISKAK+ ++TR AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKAFNAELSALYDVKPPISKAKMNSLTRGAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQFQ-DKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF +KDVF PRFA+N++ TF +L +CP EDKSK+IRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGVEKDVFAPRFAKNMQTTFLNLLKCPQEDKSKVIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPNHPIHRELAEIQARNGVENMCSTT 160
VF ++I PLFD+ADPNHPIH+E A NG N+ ST
Sbjct: 121 AVFPSEVIQPLFDLADPNHPIHKEQA--VNTNGTLNISSTN 159
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/130 (70%), Positives = 111/130 (85%), Gaps = 2/130 (1%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+GHLSKLV +EELSDTFGE+GD+VSI+LI PRGCAF+CMNRRQDA +AL KL
Sbjct: 553 SVCSTTLWVGHLSKLVHQEELSDTFGEFGDIVSIDLISPRGCAFICMNRRQDAYRALTKL 612
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYD--YLEDGGVF 272
KN K+QGK ITLAWAPGKG+K K+WKD+WEV+ GVSYIP+++L D D LE+GG+
Sbjct: 613 KNHKMQGKAITLAWAPGKGVKGKEWKDYWEVELGVSYIPWNKLVNVTDQDLELLEEGGMI 672
Query: 273 DEDTVPLWLK 282
DEDT+P LK
Sbjct: 673 DEDTLPPNLK 682
>gi|157167923|ref|XP_001662905.1| hypothetical protein AaeL_AAEL002986 [Aedes aegypti]
gi|108881522|gb|EAT45747.1| AAEL002986-PA [Aedes aegypti]
Length = 1337
Score = 234 bits (598), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 105/142 (73%), Positives = 125/142 (88%), Gaps = 1/142 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ ++ FNQELS LY+ KPPISKAK+ +ITRSA++AIKFYKHVVQSVEKFI KCK EYK+
Sbjct: 1 METVRVFNQELSGLYEAKPPISKAKMASITRSAMKAIKFYKHVVQSVEKFISKCKSEYKI 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF +KDVF PRFARN++ TF HL++CPPEDKSKIIRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGAEKDVFAPRFARNMEQTFAHLFRCPPEDKSKIIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPNHPIH 141
VF P++I PLFD+A+P HP+H
Sbjct: 121 MVFAPEVIQPLFDLANPEHPLH 142
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 81/127 (63%), Positives = 108/127 (85%)
Query: 156 MCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLK 215
+CSTTLW+GHLSKLVQ+EELSDTFG+YGD+VSI+LIPPRGCAF+ MNRRQDA K++ LK
Sbjct: 471 VCSTTLWVGHLSKLVQQEELSDTFGKYGDIVSIDLIPPRGCAFIVMNRRQDAYKSMQSLK 530
Query: 216 NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDED 275
N K+ G+TIT++WA GKG+K K+WKD+W++ G SYIP+ +L+ D + LE+GG+ DE+
Sbjct: 531 NHKMHGRTITISWATGKGVKSKEWKDYWDIDLGCSYIPWSKLNHNTDLESLEEGGMLDEE 590
Query: 276 TVPLWLK 282
T+P W+K
Sbjct: 591 TMPPWMK 597
>gi|350409469|ref|XP_003488749.1| PREDICTED: hypothetical protein LOC100740094 [Bombus impatiens]
Length = 1490
Score = 233 bits (595), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 111/161 (68%), Positives = 131/161 (81%), Gaps = 3/161 (1%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +K FN ELS+LYD KPPISKAK+ ++TR AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKAFNAELSALYDVKPPISKAKMNSLTRGAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQFQ-DKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF +KDVF PRFA+N++ TF +L +CP EDKSK+IRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGVEKDVFAPRFAKNMQTTFLNLLKCPQEDKSKVIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPNHPIHRELAEIQARNGVENMCSTT 160
VF ++I PLFD+ADPNHPIH+E A NG N +T
Sbjct: 121 AVFPSEVIQPLFDLADPNHPIHKEQA--VNTNGTLNASATN 159
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 91/130 (70%), Positives = 111/130 (85%), Gaps = 2/130 (1%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+GHLSKLV +EELSDTFGE+GD+VSI+LI PRGCAF+CMNRRQDA +AL KL
Sbjct: 555 SVCSTTLWVGHLSKLVHQEELSDTFGEFGDIVSIDLISPRGCAFICMNRRQDAYRALTKL 614
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYD--YLEDGGVF 272
KN K+QGK ITLAWAPGKG+K K+WKD+WEV+ GVSYIP+++L D D LE+GG+
Sbjct: 615 KNHKMQGKAITLAWAPGKGVKGKEWKDYWEVELGVSYIPWNKLVNVTDQDLELLEEGGMI 674
Query: 273 DEDTVPLWLK 282
DEDT+P LK
Sbjct: 675 DEDTLPPNLK 684
>gi|195025624|ref|XP_001986093.1| GH21172 [Drosophila grimshawi]
gi|193902093|gb|EDW00960.1| GH21172 [Drosophila grimshawi]
Length = 1378
Score = 233 bits (595), Expect = 5e-59, Method: Composition-based stats.
Identities = 106/154 (68%), Positives = 128/154 (83%), Gaps = 1/154 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ + FN ELS LYD++PPISKAK+ AIT+SA+RAIKFYKHVVQSVEKFI+KCKPEYKV
Sbjct: 1 METVGAFNNELSGLYDSRPPISKAKMAAITKSAMRAIKFYKHVVQSVEKFILKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQ+ +KDVF PRF RNL TF +L++C PEDKS+IIRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQYGTEKDVFAPRFQRNLTETFANLFRCAPEDKSRIIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPNHPIHRELAEIQARNGV 153
VF D+I P+FD+ADPNHPI+ ++ I G+
Sbjct: 121 NVFKSDVIQPIFDLADPNHPIYHQMPPIVGAGGL 154
Score = 199 bits (506), Expect = 1e-48, Method: Composition-based stats.
Identities = 85/128 (66%), Positives = 112/128 (87%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+GHLSKLV +EELSDTFGEYGD+VSI+ I PRGCAF+ MNRRQDA KA+ L
Sbjct: 507 SVCSTTLWVGHLSKLVYQEELSDTFGEYGDIVSIDQIVPRGCAFIVMNRRQDAHKAMQAL 566
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDE 274
KN KLQG+ IT++WA GKG+K K+WKDFW+++ GV+Y+P+++LS + D+D LE+GG+FDE
Sbjct: 567 KNHKLQGRAITISWAAGKGVKSKEWKDFWDLELGVTYVPWNKLSPDTDFDSLEEGGMFDE 626
Query: 275 DTVPLWLK 282
DT+P W+K
Sbjct: 627 DTMPGWMK 634
>gi|195429563|ref|XP_002062827.1| GK19487 [Drosophila willistoni]
gi|194158912|gb|EDW73813.1| GK19487 [Drosophila willistoni]
Length = 1307
Score = 233 bits (594), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 105/145 (72%), Positives = 125/145 (86%), Gaps = 1/145 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ + FN ELS LYD++PPISKAK+ AIT+SA+RAIKFYKHVVQSVEKFI+KCKPEYKV
Sbjct: 1 METVVAFNNELSGLYDSRPPISKAKMAAITKSAMRAIKFYKHVVQSVEKFILKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQ+ DKDVF PRF RNL TF +L++C PEDKS+IIRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQYGTDKDVFAPRFQRNLTETFANLFRCAPEDKSRIIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPNHPIHREL 144
VF D+I P+FD+ADPNHPI+ ++
Sbjct: 121 NVFKSDVIQPIFDLADPNHPIYHQM 145
Score = 203 bits (517), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 87/127 (68%), Positives = 112/127 (88%)
Query: 156 MCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLK 215
+CSTTLW+GHLSKLV +EELSDTFGEYGD+VSI+ I PRGCAF+ MNRRQDA KA+ LK
Sbjct: 509 VCSTTLWVGHLSKLVYQEELSDTFGEYGDIVSIDQIVPRGCAFIVMNRRQDAHKAMQSLK 568
Query: 216 NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDED 275
N KLQG+ IT++WA GKG+K K+WKDFW+++ GV+YIP+++LS+E D+D LE+GG+FDED
Sbjct: 569 NHKLQGRAITISWAAGKGVKSKEWKDFWDLELGVTYIPWNKLSQETDFDSLEEGGMFDED 628
Query: 276 TVPLWLK 282
T+P W+K
Sbjct: 629 TMPSWMK 635
>gi|332021116|gb|EGI61503.1| Putative RNA-binding protein 16 [Acromyrmex echinatior]
Length = 1586
Score = 233 bits (593), Expect = 9e-59, Method: Composition-based stats.
Identities = 107/144 (74%), Positives = 126/144 (87%), Gaps = 1/144 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +K FN ELS+LYD KPPISKAK+ ++TR AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKAFNGELSALYDVKPPISKAKMNSLTRGAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF +KDVF PRFA+N++ TF +L +CP EDKSK+IRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGMEKDVFAPRFAKNMQTTFLNLLKCPQEDKSKVIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPNHPIHRE 143
VF P++I PLFD+ADPNHPIH+E
Sbjct: 121 AVFPPEVIQPLFDLADPNHPIHKE 144
Score = 194 bits (492), Expect = 5e-47, Method: Composition-based stats.
Identities = 90/130 (69%), Positives = 111/130 (85%), Gaps = 2/130 (1%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+GHLSKLV +EELSDTFGE GD+VSI+LI PRGCAF+CMNRRQDA +AL KL
Sbjct: 535 SVCSTTLWVGHLSKLVHQEELSDTFGELGDIVSIDLISPRGCAFICMNRRQDAYRALTKL 594
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEID--YDYLEDGGVF 272
KN K+QGK ITLAWAPGKG+K K+WKD+WEV+ GVSYIP+++L+ D + LE+GG+
Sbjct: 595 KNQKMQGKAITLAWAPGKGVKGKEWKDYWEVELGVSYIPWNKLTNITDQELELLEEGGMI 654
Query: 273 DEDTVPLWLK 282
DEDT+P LK
Sbjct: 655 DEDTLPPHLK 664
>gi|383849473|ref|XP_003700369.1| PREDICTED: uncharacterized protein LOC100879327 [Megachile
rotundata]
Length = 1489
Score = 232 bits (591), Expect = 2e-58, Method: Composition-based stats.
Identities = 113/160 (70%), Positives = 132/160 (82%), Gaps = 3/160 (1%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD +K FN ELS+LYD KPPISKAK+ ++TR AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MDAVKAFNAELSALYDVKPPISKAKMNSLTRGAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQFQ-DKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF +KDVF PRFA+N++ TF +L +CP EDKSK+IRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGVEKDVFAPRFAKNMQTTFLNLLKCPQEDKSKVIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPNHPIHRELAEIQARNGVENMCST 159
VF ++I PLFD+ADPNHPIH+E A NG N+ ST
Sbjct: 121 AVFPSEVIQPLFDLADPNHPIHKEQA--VNSNGTLNVPST 158
Score = 194 bits (492), Expect = 5e-47, Method: Composition-based stats.
Identities = 91/130 (70%), Positives = 111/130 (85%), Gaps = 2/130 (1%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+GHLSKLV +EELSDTFGE+GD+VSI+LI PRGCAF+CMNRRQDA +AL KL
Sbjct: 551 SVCSTTLWVGHLSKLVHQEELSDTFGEFGDIVSIDLISPRGCAFICMNRRQDAYRALTKL 610
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYD--YLEDGGVF 272
KN K+QGK ITLAWAPGKG+K K+WKD+WEV+ GVSYIP+++L D D LE+GG+
Sbjct: 611 KNHKMQGKAITLAWAPGKGVKGKEWKDYWEVELGVSYIPWNKLLNVTDQDLELLEEGGMI 670
Query: 273 DEDTVPLWLK 282
DEDT+P LK
Sbjct: 671 DEDTLPPNLK 680
>gi|195382177|ref|XP_002049807.1| GJ21791 [Drosophila virilis]
gi|194144604|gb|EDW61000.1| GJ21791 [Drosophila virilis]
Length = 1344
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 105/148 (70%), Positives = 126/148 (85%), Gaps = 1/148 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ + FN ELS LYD++PPISKAK+ AIT+SA+RAIKFYKHVVQSVEKFI+KCKPEYKV
Sbjct: 1 METVVAFNNELSGLYDSRPPISKAKMAAITKSAMRAIKFYKHVVQSVEKFILKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQ+ +KDVF PRF RNL TF +L++C PEDKS+IIRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQYGTEKDVFAPRFQRNLTETFANLFRCAPEDKSRIIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPNHPIHRELAEI 147
VF D+I P+FD+ADPNHPI+ ++ I
Sbjct: 121 NVFKSDVIQPIFDLADPNHPIYHQMPPI 148
Score = 201 bits (511), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 111/128 (86%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+GHLSKLV +EELSDTFGEYGD+VSI+ I PRGCAF+ MNRRQDA KA+ L
Sbjct: 503 SVCSTTLWVGHLSKLVYQEELSDTFGEYGDIVSIDQIVPRGCAFIVMNRRQDAHKAMQAL 562
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDE 274
KN KLQG+ IT++WA GKG+K K+WKDFW+++ GV+Y+P+ +LS + D+D LE+GG+FDE
Sbjct: 563 KNHKLQGRAITISWAAGKGVKSKEWKDFWDLELGVTYVPWSKLSPDTDFDSLEEGGMFDE 622
Query: 275 DTVPLWLK 282
DT+P W+K
Sbjct: 623 DTMPSWMK 630
>gi|345484253|ref|XP_001603992.2| PREDICTED: hypothetical protein LOC100120342 [Nasonia vitripennis]
Length = 1864
Score = 231 bits (590), Expect = 2e-58, Method: Composition-based stats.
Identities = 112/159 (70%), Positives = 131/159 (82%), Gaps = 6/159 (3%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD +K FN ELS LY+ KPPISKAK+ ++TR AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MDAVKAFNAELSGLYEVKPPISKAKMNSLTRGAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF +KDVF PRFA+N++ TF +L +CPPEDKSK+IRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTEKDVFAPRFAKNMQTTFLNLLKCPPEDKSKVIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPNHPIHRELAEIQARNGVENMCS 158
VF P++I PLFD+ DPNHPIH+E + NGV N S
Sbjct: 121 AVFPPEVIQPLFDLVDPNHPIHKEQS-----NGVLNASS 154
Score = 188 bits (477), Expect = 3e-45, Method: Composition-based stats.
Identities = 89/130 (68%), Positives = 111/130 (85%), Gaps = 2/130 (1%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+GHLSKLV +EELSDTFGE GD+VSI+LI PRGCAF+CMNRRQDA +AL KL
Sbjct: 548 SVCSTTLWVGHLSKLVHQEELSDTFGELGDIVSIDLISPRGCAFICMNRRQDAYRALTKL 607
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDY--DYLEDGGVF 272
KN K+QGK ITLAWAPGKG+K K+WKD+WEV+ GVSYIP+ +L+ D+ + LE+GG+
Sbjct: 608 KNHKMQGKAITLAWAPGKGVKGKEWKDYWEVELGVSYIPWSKLNNISDHELELLEEGGMI 667
Query: 273 DEDTVPLWLK 282
DED++P LK
Sbjct: 668 DEDSMPPRLK 677
>gi|195123079|ref|XP_002006037.1| GI18767 [Drosophila mojavensis]
gi|193911105|gb|EDW09972.1| GI18767 [Drosophila mojavensis]
Length = 1377
Score = 231 bits (589), Expect = 3e-58, Method: Composition-based stats.
Identities = 106/152 (69%), Positives = 128/152 (84%), Gaps = 1/152 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ + FN ELS LYD++PPISKAK+ AIT+SA+RAIKFYKHVVQSVEKFI+KCKPEYKV
Sbjct: 1 METVVAFNNELSGLYDSRPPISKAKMAAITKSAMRAIKFYKHVVQSVEKFILKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQ+ +KDVF PRF RNL TF +L++C PEDKS+IIRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQYGTEKDVFAPRFQRNLTETFANLFRCAPEDKSRIIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPNHPIHRELAEIQARN 151
VF ++I P+FD+ADPNHPI+ ++ I A N
Sbjct: 121 NVFKSEVIQPIFDLADPNHPIYHQMPPISAGN 152
Score = 197 bits (500), Expect = 6e-48, Method: Composition-based stats.
Identities = 85/128 (66%), Positives = 111/128 (86%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+GHLSKLV +EELSDTFGEYGD+VSI+ I PRGCAF+ MNRRQDA KA+ L
Sbjct: 508 SVCSTTLWVGHLSKLVYQEELSDTFGEYGDIVSIDQIVPRGCAFIVMNRRQDAHKAMQAL 567
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDE 274
KN KLQG+ IT++WA GKG+K K+WKDFW++ GV+Y+P+++LS + D+D LE+GG+FDE
Sbjct: 568 KNHKLQGRAITISWAAGKGVKSKEWKDFWDLDLGVTYVPWNKLSPDTDFDSLEEGGMFDE 627
Query: 275 DTVPLWLK 282
DT+P W+K
Sbjct: 628 DTMPSWMK 635
>gi|312381414|gb|EFR27170.1| hypothetical protein AND_06286 [Anopheles darlingi]
Length = 1644
Score = 229 bits (585), Expect = 7e-58, Method: Composition-based stats.
Identities = 113/190 (59%), Positives = 138/190 (72%), Gaps = 29/190 (15%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ ++ FNQELS LY++KPPISKAK+ +ITRSA++AIKFYKHVVQSVEKFI KCK EYK+
Sbjct: 113 METVRVFNQELSGLYESKPPISKAKMASITRSAMKAIKFYKHVVQSVEKFIQKCKSEYKI 172
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDK------------- 106
P LYVIDS+VRQSRHQF +KDVF PRFARN++ATF HL++CPPEDK
Sbjct: 173 PGLYVIDSIVRQSRHQFGPEKDVFAPRFARNMEATFAHLFRCPPEDKVSALDGGEYALHS 232
Query: 107 ------------SKIIRVLNLWQKNEVFTPDIIHPLFDMADPNHPIHREL---AEIQARN 151
SKIIRVLNLWQKN VF P++I PLFD+A+P+HPIH++ A +Q +
Sbjct: 233 LVSLLSSNPFIQSKIIRVLNLWQKNMVFLPEVIQPLFDLANPDHPIHQQYNAQATLQEQA 292
Query: 152 GVENMCSTTL 161
G M S L
Sbjct: 293 GANGMNSGVL 302
Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats.
Identities = 84/128 (65%), Positives = 109/128 (85%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+GHLSKLVQ+EELSDTFG+YGD+VSI++IPPRGCAF+ MNRRQDA K + L
Sbjct: 649 SVCSTTLWVGHLSKLVQQEELSDTFGKYGDIVSIDMIPPRGCAFIVMNRRQDAFKCMQSL 708
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDE 274
KN K+ G+ IT++WA GKG+K K+WKD+W++ GVSYIP+ +LS D + LEDGG+FDE
Sbjct: 709 KNHKMHGRAITISWAAGKGVKSKEWKDYWDLDLGVSYIPWSKLSHATDLESLEDGGMFDE 768
Query: 275 DTVPLWLK 282
DT+P W+K
Sbjct: 769 DTLPGWMK 776
>gi|194754727|ref|XP_001959646.1| GF12972 [Drosophila ananassae]
gi|190620944|gb|EDV36468.1| GF12972 [Drosophila ananassae]
Length = 1352
Score = 229 bits (585), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 104/150 (69%), Positives = 127/150 (84%), Gaps = 1/150 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ + FN ELS LYD++PPISKAK+ AIT+SA+RAIKFYKHVVQSVEKFI+KCKPEYKV
Sbjct: 1 METVVAFNNELSGLYDSRPPISKAKMAAITKSAMRAIKFYKHVVQSVEKFILKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQ+ +KDVF PRF RNL TF +L++C PEDKS+IIRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQYGTEKDVFAPRFQRNLPETFANLFRCAPEDKSRIIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPNHPIHRELAEIQA 149
VF ++I P+FD+ADPNHPI+ ++ + A
Sbjct: 121 NVFKSEVIQPIFDLADPNHPIYHQMPPLSA 150
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 85/127 (66%), Positives = 110/127 (86%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+GHLSKLV +EELSDTFGEYGD+VSI+ I PRGCAF+ MNRRQDA KA+ L
Sbjct: 493 SVCSTTLWVGHLSKLVYQEELSDTFGEYGDIVSIDQIIPRGCAFIVMNRRQDAHKAMQAL 552
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDE 274
KN KLQG+ IT++WA GKG+K K+WKDFW++ GV+YIP+++LS + D+D LE+GG+FDE
Sbjct: 553 KNHKLQGRAITISWAAGKGVKSKEWKDFWDLDLGVTYIPWNKLSPDTDFDALEEGGMFDE 612
Query: 275 DTVPLWL 281
DT+P W+
Sbjct: 613 DTMPGWM 619
>gi|195585322|ref|XP_002082438.1| GD25221 [Drosophila simulans]
gi|194194447|gb|EDX08023.1| GD25221 [Drosophila simulans]
Length = 1455
Score = 229 bits (584), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 102/145 (70%), Positives = 124/145 (85%), Gaps = 1/145 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ + FN ELS LYD++PPISKAK+ AIT+SA+RAIK YKHVVQSVEKFI+KCKPEYKV
Sbjct: 1 METVVAFNNELSGLYDSRPPISKAKMAAITKSAMRAIKLYKHVVQSVEKFILKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQ+ DKD+F PRF RNL TF +L++C PEDKS+IIRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQYGMDKDLFAPRFQRNLTETFANLFRCAPEDKSRIIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPNHPIHREL 144
VF ++I P+FD+ADPNHPI+ ++
Sbjct: 121 NVFKSEVIQPIFDLADPNHPIYHQM 145
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 111/128 (86%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+GHLSKLV +EELSDTFGEYGD+VSI+ I PRGCAF+ MNRRQDA KA+ L
Sbjct: 490 SVCSTTLWVGHLSKLVYQEELSDTFGEYGDIVSIDQIVPRGCAFIVMNRRQDAHKAMQAL 549
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDE 274
KN KLQG+ IT++WA GKG+K K+WKD+W+++ GV+YIP+ +LS + D+D LE+GG+FDE
Sbjct: 550 KNHKLQGRAITISWAAGKGVKSKEWKDYWDLELGVTYIPWSKLSSDTDFDALEEGGMFDE 609
Query: 275 DTVPLWLK 282
DT+P+ +K
Sbjct: 610 DTMPIQMK 617
>gi|198461149|ref|XP_001361927.2| GA18068 [Drosophila pseudoobscura pseudoobscura]
gi|198137252|gb|EAL26506.2| GA18068 [Drosophila pseudoobscura pseudoobscura]
Length = 1362
Score = 228 bits (582), Expect = 2e-57, Method: Composition-based stats.
Identities = 104/142 (73%), Positives = 123/142 (86%), Gaps = 1/142 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ + FN ELS LYD++PPISKAK+ AIT+SA+RAIKFYKHVVQSVEKFI+KCKPEYKV
Sbjct: 1 METVVAFNNELSGLYDSRPPISKAKMAAITKSAMRAIKFYKHVVQSVEKFILKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQ+ +KDVF PRF RNL TF +L++C PEDKS+IIRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQYGPEKDVFAPRFQRNLTETFANLFRCAPEDKSRIIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPNHPIH 141
VF D+I P+FD+ADPNHPI+
Sbjct: 121 NVFKSDVIQPIFDLADPNHPIY 142
Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats.
Identities = 87/128 (67%), Positives = 110/128 (85%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+GHLSKLV +EELSDTFGEYGD+VSI+ I PRGCAF+ MNRRQDA KA+ L
Sbjct: 509 SVCSTTLWVGHLSKLVYQEELSDTFGEYGDIVSIDQIVPRGCAFIVMNRRQDAHKAMQSL 568
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDE 274
KN KLQG+ IT++WA GKG+K K+WKDFW+++ GV+YIP+ +LS E D D LE+GG+FDE
Sbjct: 569 KNHKLQGRAITISWAAGKGVKSKEWKDFWDLELGVTYIPWSKLSPETDLDTLEEGGMFDE 628
Query: 275 DTVPLWLK 282
DT+P W+K
Sbjct: 629 DTMPSWIK 636
>gi|195170170|ref|XP_002025886.1| GL10172 [Drosophila persimilis]
gi|194110750|gb|EDW32793.1| GL10172 [Drosophila persimilis]
Length = 1265
Score = 228 bits (582), Expect = 2e-57, Method: Composition-based stats.
Identities = 104/142 (73%), Positives = 123/142 (86%), Gaps = 1/142 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ + FN ELS LYD++PPISKAK+ AIT+SA+RAIKFYKHVVQSVEKFI+KCKPEYKV
Sbjct: 1 METVVAFNNELSGLYDSRPPISKAKMAAITKSAMRAIKFYKHVVQSVEKFILKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQ+ +KDVF PRF RNL TF +L++C PEDKS+IIRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQYGPEKDVFAPRFQRNLTETFANLFRCAPEDKSRIIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPNHPIH 141
VF D+I P+FD+ADPNHPI+
Sbjct: 121 NVFKSDVIQPIFDLADPNHPIY 142
Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats.
Identities = 87/128 (67%), Positives = 110/128 (85%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+GHLSKLV +EELSDTFGEYGD+VSI+ I PRGCAF+ MNRRQDA KA+ L
Sbjct: 414 SVCSTTLWVGHLSKLVYQEELSDTFGEYGDIVSIDQIVPRGCAFIVMNRRQDAHKAMQSL 473
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDE 274
KN KLQG+ IT++WA GKG+K K+WKDFW+++ GV+YIP+ +LS E D D LE+GG+FDE
Sbjct: 474 KNHKLQGRAITISWAAGKGVKSKEWKDFWDLELGVTYIPWSKLSPETDLDTLEEGGMFDE 533
Query: 275 DTVPLWLK 282
DT+P W+K
Sbjct: 534 DTMPSWIK 541
>gi|442624375|ref|NP_001261119.1| CG4266, isoform C [Drosophila melanogaster]
gi|125660158|gb|ABN49307.1| IP17766p [Drosophila melanogaster]
gi|440214563|gb|AGB93651.1| CG4266, isoform C [Drosophila melanogaster]
Length = 412
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/145 (70%), Positives = 124/145 (85%), Gaps = 1/145 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ + FN ELS LYD++PPISKAK+ AIT+SA+RAIK YKHVVQSVEKFI+KCKPEYKV
Sbjct: 1 METVVAFNNELSGLYDSRPPISKAKMAAITKSAMRAIKLYKHVVQSVEKFILKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQ+ DKD+F PRF RNL TF +L++C PEDKS+IIRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQYGMDKDLFAPRFQRNLTETFANLFRCAPEDKSRIIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPNHPIHREL 144
VF ++I P+FD+ADPNHPI+ ++
Sbjct: 121 NVFKSEVIQPIFDLADPNHPIYHQM 145
>gi|194881818|ref|XP_001975018.1| GG20798 [Drosophila erecta]
gi|190658205|gb|EDV55418.1| GG20798 [Drosophila erecta]
Length = 1295
Score = 228 bits (581), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 102/145 (70%), Positives = 124/145 (85%), Gaps = 1/145 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ + FN ELS LYD++PPISKAK+ AIT+SA+RAIK YKHVVQSVEKFI+KCKPEYKV
Sbjct: 1 METVVAFNNELSGLYDSRPPISKAKMAAITKSAMRAIKLYKHVVQSVEKFILKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQ+ DKD+F PRF RNL TF +L++C PEDKS+IIRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQYGMDKDLFAPRFQRNLTETFANLFRCAPEDKSRIIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPNHPIHREL 144
VF ++I P+FD+ADPNHPI+ ++
Sbjct: 121 NVFKSEVIQPIFDLADPNHPIYHQM 145
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 111/128 (86%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+GHLSKLV +EELSDTFGEYGD+VSI+ I PRGCAF+ MNRRQDA KA+ L
Sbjct: 492 SVCSTTLWVGHLSKLVYQEELSDTFGEYGDIVSIDQIVPRGCAFIVMNRRQDAHKAMQAL 551
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDE 274
KN KLQG+ IT++WA GKG+K K+WKDFW+++ GV+YIP+ +LS + D+D LE+GG+FDE
Sbjct: 552 KNHKLQGRAITISWAAGKGVKSKEWKDFWDLELGVTYIPWSKLSSDTDFDALEEGGMFDE 611
Query: 275 DTVPLWLK 282
DT+P+ +K
Sbjct: 612 DTMPIQMK 619
>gi|22024229|ref|NP_611557.2| CG4266, isoform A [Drosophila melanogaster]
gi|21645185|gb|AAF46686.2| CG4266, isoform A [Drosophila melanogaster]
gi|157816772|gb|ABV82378.1| LD44216p [Drosophila melanogaster]
Length = 1215
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 102/145 (70%), Positives = 124/145 (85%), Gaps = 1/145 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ + FN ELS LYD++PPISKAK+ AIT+SA+RAIK YKHVVQSVEKFI+KCKPEYKV
Sbjct: 1 METVVAFNNELSGLYDSRPPISKAKMAAITKSAMRAIKLYKHVVQSVEKFILKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQ+ DKD+F PRF RNL TF +L++C PEDKS+IIRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQYGMDKDLFAPRFQRNLTETFANLFRCAPEDKSRIIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPNHPIHREL 144
VF ++I P+FD+ADPNHPI+ ++
Sbjct: 121 NVFKSEVIQPIFDLADPNHPIYHQM 145
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 111/128 (86%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+GHLSKLV +EELSDTFGEYGD+VSI+ I PRGCAF+ MNRRQDA KA+ L
Sbjct: 397 SVCSTTLWVGHLSKLVYQEELSDTFGEYGDIVSIDQIVPRGCAFIVMNRRQDAHKAMQAL 456
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDE 274
KN KLQG+ IT++WA GKG+K K+WKD+W+++ GV+YIP+ +LS + D+D LE+GG+FDE
Sbjct: 457 KNHKLQGRAITISWAAGKGVKSKEWKDYWDLELGVTYIPWSKLSSDTDFDALEEGGMFDE 516
Query: 275 DTVPLWLK 282
DT+P+ +K
Sbjct: 517 DTMPIQMK 524
>gi|195486607|ref|XP_002091576.1| GE13738 [Drosophila yakuba]
gi|194177677|gb|EDW91288.1| GE13738 [Drosophila yakuba]
Length = 1293
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 102/145 (70%), Positives = 124/145 (85%), Gaps = 1/145 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ + FN ELS LYD++PPISKAK+ AIT+SA+RAIK YKHVVQSVEKFI+KCKPEYKV
Sbjct: 1 METVVAFNNELSGLYDSRPPISKAKMAAITKSAMRAIKLYKHVVQSVEKFILKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQ+ DKD+F PRF RNL TF +L++C PEDKS+IIRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQYGMDKDLFAPRFQRNLTETFANLFRCAPEDKSRIIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPNHPIHREL 144
VF ++I P+FD+ADPNHPI+ ++
Sbjct: 121 NVFKSEVIQPIFDLADPNHPIYHQM 145
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 85/128 (66%), Positives = 111/128 (86%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+GHLSKLV +EELSDTFGEYGD+VSI+ I PRGCAF+ MNRRQDA KA+ L
Sbjct: 489 SVCSTTLWVGHLSKLVYQEELSDTFGEYGDIVSIDQIVPRGCAFIVMNRRQDAHKAMQAL 548
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDE 274
KN KLQG+ IT++WA GKG+K K+WKDFW+++ GV+YIP+ +LS + D+D LE+GG+FDE
Sbjct: 549 KNHKLQGRAITISWAAGKGVKSKEWKDFWDLELGVTYIPWSKLSSDTDFDALEEGGMFDE 608
Query: 275 DTVPLWLK 282
DT+P+ +K
Sbjct: 609 DTMPIQMK 616
>gi|161077311|ref|NP_001097394.1| CG4266, isoform B [Drosophila melanogaster]
gi|157400428|gb|ABV53866.1| CG4266, isoform B [Drosophila melanogaster]
Length = 1306
Score = 228 bits (580), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 102/145 (70%), Positives = 124/145 (85%), Gaps = 1/145 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ + FN ELS LYD++PPISKAK+ AIT+SA+RAIK YKHVVQSVEKFI+KCKPEYKV
Sbjct: 1 METVVAFNNELSGLYDSRPPISKAKMAAITKSAMRAIKLYKHVVQSVEKFILKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQ+ DKD+F PRF RNL TF +L++C PEDKS+IIRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQYGMDKDLFAPRFQRNLTETFANLFRCAPEDKSRIIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPNHPIHREL 144
VF ++I P+FD+ADPNHPI+ ++
Sbjct: 121 NVFKSEVIQPIFDLADPNHPIYHQM 145
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 84/128 (65%), Positives = 111/128 (86%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+GHLSKLV +EELSDTFGEYGD+VSI+ I PRGCAF+ MNRRQDA KA+ L
Sbjct: 488 SVCSTTLWVGHLSKLVYQEELSDTFGEYGDIVSIDQIVPRGCAFIVMNRRQDAHKAMQAL 547
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDE 274
KN KLQG+ IT++WA GKG+K K+WKD+W+++ GV+YIP+ +LS + D+D LE+GG+FDE
Sbjct: 548 KNHKLQGRAITISWAAGKGVKSKEWKDYWDLELGVTYIPWSKLSSDTDFDALEEGGMFDE 607
Query: 275 DTVPLWLK 282
DT+P+ +K
Sbjct: 608 DTMPIQMK 615
>gi|357615091|gb|EHJ69463.1| hypothetical protein KGM_11769 [Danaus plexippus]
Length = 1306
Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats.
Identities = 109/162 (67%), Positives = 129/162 (79%), Gaps = 2/162 (1%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M +K FN ELS LY+ +PPISKAK++AITR AI+AIKFYKHVV SVEKFI KCKPEYKV
Sbjct: 1 MAEVKAFNAELSGLYENRPPISKAKMSAITRGAIKAIKFYKHVVHSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF QDKDVF PRFA+N++ TF +L++CP EDK IIRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGQDKDVFAPRFAKNMQQTFANLFRCPDEDKRNIIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPNHPIHRELA-EIQARNGVENMCSTT 160
VF P++I PL D+ADP+HP+H E+ + NG NM T
Sbjct: 121 NVFGPEVIQPLLDLADPSHPLHLEIQNQNNTTNGSINMSHNT 162
Score = 115 bits (287), Expect = 3e-23, Method: Composition-based stats.
Identities = 69/132 (52%), Positives = 90/132 (68%), Gaps = 5/132 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+G LSK EEL D FG G V +++++ PRGCAFV M RR+DAA+AL KL
Sbjct: 407 SVCSTTLWVGRLSKQATPEELWDLFGAVGGVAAVDVVAPRGCAFVVMERRRDAARALAKL 466
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKE-----IDYDYLEDG 269
KL K I +AWA GKG+K ++WKD+WE + GV+Y+P+ L + D LEDG
Sbjct: 467 HRHKLHSKEIDVAWAAGKGVKGREWKDYWEAELGVAYLPWSALHARWLLGALSLDALEDG 526
Query: 270 GVFDEDTVPLWL 281
G DEDT+P WL
Sbjct: 527 GAVDEDTLPPWL 538
>gi|291234161|ref|XP_002737018.1| PREDICTED: RNA binding motif protein 16-like [Saccoglossus
kowalevskii]
Length = 1381
Score = 220 bits (560), Expect = 7e-55, Method: Compositional matrix adjust.
Identities = 97/137 (70%), Positives = 121/137 (88%), Gaps = 1/137 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ ++ FN ELSSLY++KPPIS+AK+TA+T+SAI+AIKFYKHVVQSVEKFI+KC+PEYKV
Sbjct: 1 MEAVRAFNNELSSLYESKPPISRAKMTAVTKSAIKAIKFYKHVVQSVEKFIMKCRPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVF PRFA+N+ TF HL++CP +DK++++RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGADKDVFAPRFAKNVVPTFLHLFKCPQDDKARVVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADP 136
VF D+I PL DMA+P
Sbjct: 121 GVFGADVIQPLLDMANP 137
Score = 150 bits (378), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 63/128 (49%), Positives = 96/128 (75%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTT+++GHL+K E+++ + F E+G + SI++IPPRGCAFVCM +RQD+ KAL KL
Sbjct: 506 SVCSTTIFLGHLAKATGEKDIKEIFEEFGQIQSIDIIPPRGCAFVCMEQRQDSHKALQKL 565
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDE 274
KN KL G TI ++WA KG K ++K +W+ GV+YIP+D+L+ ID + L +GG+ D+
Sbjct: 566 KNLKLHGNTIKMSWATNKGTKGAEYKKYWDSDLGVAYIPWDKLATGIDLEELSEGGMIDQ 625
Query: 275 DTVPLWLK 282
+T+P L+
Sbjct: 626 ETLPPELR 633
>gi|159164134|pdb|2DIW|A Chain A, Solution Structure Of The Rpr Domain Of Putative Rna-
Binding Protein 16
Length = 152
Score = 214 bits (544), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 102/140 (72%), Positives = 119/140 (85%), Gaps = 1/140 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 10 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 69
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 70 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 129
Query: 120 EVFTPDIIHPLFDMADPNHP 139
VF +II PL DMA + P
Sbjct: 130 NVFKSEIIQPLLDMAAGSGP 149
>gi|116283836|gb|AAH32728.1| RBM16 protein [Homo sapiens]
Length = 461
Score = 213 bits (543), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 NVFKSEIIQPLLDMA 135
>gi|397468332|ref|XP_003805842.1| PREDICTED: LOW QUALITY PROTEIN: T-lymphoma invasion and
metastasis-inducing protein 2 [Pan paniscus]
Length = 2993
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 NVFKSEIIQPLLDMA 135
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 468 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 527
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 528 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 585
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 586 EGGMIDQETV 595
>gi|190016422|pdb|3D9I|A Chain A, Snapshots Of The Rna Processing Factor Scaf8 Bound To
Different Phosphorylated Forms Of The Carboxy-Terminal
Domain Of Rna-Polymerase Ii
gi|190016423|pdb|3D9I|B Chain B, Snapshots Of The Rna Processing Factor Scaf8 Bound To
Different Phosphorylated Forms Of The Carboxy-Terminal
Domain Of Rna-Polymerase Ii
Length = 145
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKTFNSELYSLMDMKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 NVFKSEIIQPLLDMA 135
>gi|403284931|ref|XP_003933801.1| PREDICTED: LOW QUALITY PROTEIN: T-lymphoma invasion and
metastasis-inducing protein 2 [Saimiri boliviensis
boliviensis]
Length = 2993
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 NVFKSEIIQPLLDMA 135
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 468 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 527
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 528 ALQKLSSGSYKIGSKIIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 585
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 586 EGGMIDQETV 595
>gi|395850687|ref|XP_003797908.1| PREDICTED: LOW QUALITY PROTEIN: T-lymphoma invasion and
metastasis-inducing protein 2 [Otolemur garnettii]
Length = 2982
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 NVFKSEIIQPLLDMA 135
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 468 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 527
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 528 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 585
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 586 EGGMIDQETV 595
>gi|297291491|ref|XP_002808441.1| PREDICTED: LOW QUALITY PROTEIN: t-lymphoma invasion and
metastasis-inducing protein 2-like [Macaca mulatta]
Length = 2993
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 NVFKSEIIQPLLDMA 135
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 468 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 527
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 528 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 585
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 586 EGGMIDQETV 595
>gi|402867868|ref|XP_003898051.1| PREDICTED: protein SCAF8 isoform 1 [Papio anubis]
Length = 1349
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 79 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 138
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 139 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 198
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 199 NVFKSEIIQPLLDMA 213
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 546 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 605
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 606 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 663
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 664 EGGMIDQETV 673
>gi|28972634|dbj|BAC65733.1| mKIAA1116 protein [Mus musculus]
Length = 1362
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 95 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 154
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 155 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 214
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 215 NVFKSEIIQPLLDMA 229
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQD+ +
Sbjct: 562 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDSFR 621
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D D
Sbjct: 622 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLDGFA 679
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 680 EGGMIDQETV 689
>gi|296199495|ref|XP_002747171.1| PREDICTED: protein SCAF8 isoform 1 [Callithrix jacchus]
Length = 1357
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 87 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 146
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 147 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 206
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 207 NVFKSEIIQPLLDMA 221
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 554 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 613
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 614 ALQKLSSGSYKIGSKIIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 671
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 672 EGGMIDQETV 681
>gi|402867872|ref|XP_003898053.1| PREDICTED: protein SCAF8 isoform 3 [Papio anubis]
Length = 1316
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 46 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 105
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 106 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 165
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 166 NVFKSEIIQPLLDMA 180
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 513 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 572
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 573 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 630
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 631 EGGMIDQETV 640
>gi|426354975|ref|XP_004044916.1| PREDICTED: protein SCAF8 [Gorilla gorilla gorilla]
Length = 1271
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 NVFKSEIIQPLLDMA 135
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 468 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 527
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 528 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 585
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 586 EGGMIDQETV 595
>gi|221044370|dbj|BAH13862.1| unnamed protein product [Homo sapiens]
Length = 1316
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 46 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 105
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 106 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 165
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 166 NVFKSEIIQPLLDMA 180
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 513 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 572
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 573 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 630
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 631 EGGMIDQETV 640
>gi|40789049|dbj|BAA83068.2| KIAA1116 protein [Homo sapiens]
Length = 1330
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 60 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 119
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 120 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 179
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 180 NVFKSEIIQPLLDMA 194
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 527 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 586
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 587 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 644
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 645 EGGMIDQETV 654
>gi|332212876|ref|XP_003255546.1| PREDICTED: protein SCAF8 isoform 1 [Nomascus leucogenys]
Length = 1271
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 NVFKSEIIQPLLDMA 135
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 468 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 527
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 528 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 585
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 586 EGGMIDQETV 595
>gi|221040926|dbj|BAH12140.1| unnamed protein product [Homo sapiens]
Length = 1349
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 79 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 138
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 139 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 198
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 199 NVFKSEIIQPLLDMA 213
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 546 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 605
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 606 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 663
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 664 EGGMIDQETV 673
>gi|332825315|ref|XP_003311605.1| PREDICTED: protein SCAF8 isoform 4 [Pan troglodytes]
Length = 1316
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 46 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 105
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 106 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 165
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 166 NVFKSEIIQPLLDMA 180
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 513 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 572
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 573 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 630
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 631 EGGMIDQETV 640
>gi|62460633|ref|NP_055707.3| protein SCAF8 [Homo sapiens]
gi|30580495|sp|Q9UPN6.1|SCAF8_HUMAN RecName: Full=Protein SCAF8; AltName: Full=CDC5L complex-associated
protein 7; AltName: Full=RNA-binding motif protein 16;
AltName: Full=SR-related and CTD-associated factor 8
gi|119568082|gb|EAW47697.1| RNA binding motif protein 16, isoform CRA_b [Homo sapiens]
Length = 1271
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 NVFKSEIIQPLLDMA 135
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 468 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 527
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 528 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 585
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 586 EGGMIDQETV 595
>gi|332825309|ref|XP_527544.3| PREDICTED: protein SCAF8 isoform 5 [Pan troglodytes]
gi|410211722|gb|JAA03080.1| SR-related CTD-associated factor 8 [Pan troglodytes]
gi|410253846|gb|JAA14890.1| SR-related CTD-associated factor 8 [Pan troglodytes]
gi|410289294|gb|JAA23247.1| SR-related CTD-associated factor 8 [Pan troglodytes]
gi|410350201|gb|JAA41704.1| SR-related CTD-associated factor 8 [Pan troglodytes]
Length = 1271
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 NVFKSEIIQPLLDMA 135
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 468 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 527
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 528 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 585
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 586 EGGMIDQETV 595
>gi|383409459|gb|AFH27943.1| protein SCAF8 [Macaca mulatta]
gi|387540332|gb|AFJ70793.1| protein SCAF8 [Macaca mulatta]
Length = 1271
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 NVFKSEIIQPLLDMA 135
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 468 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 527
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 528 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 585
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 586 EGGMIDQETV 595
>gi|296199499|ref|XP_002747173.1| PREDICTED: protein SCAF8 isoform 3 [Callithrix jacchus]
Length = 1316
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 46 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 105
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 106 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 165
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 166 NVFKSEIIQPLLDMA 180
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 513 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 572
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 573 ALQKLSSGSYKIGSKIIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 630
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 631 EGGMIDQETV 640
>gi|47123322|gb|AAH70071.1| RBM16 protein [Homo sapiens]
Length = 1271
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 NVFKSEIIQPLLDMA 135
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 468 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 527
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 528 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 585
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 586 EGGMIDQETV 595
>gi|168273166|dbj|BAG10422.1| RNA binding motif protein 16 [synthetic construct]
Length = 1271
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 NVFKSEIIQPLLDMA 135
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 468 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 527
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 528 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 585
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 586 EGGMIDQETV 595
>gi|359068908|ref|XP_002690401.2| PREDICTED: protein SCAF8 [Bos taurus]
Length = 1268
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 NVFKSEIIQPLLDMA 135
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 468 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 527
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 528 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 585
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 586 EGGMIDQETV 595
>gi|54611444|gb|AAH38363.1| Rbm16 protein [Mus musculus]
Length = 1268
Score = 212 bits (540), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 NVFKSEIIQPLLDMA 135
Score = 123 bits (309), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQD+ +
Sbjct: 468 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDSFR 527
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D D
Sbjct: 528 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLDGFA 585
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 586 EGGMIDQETV 595
>gi|30527367|ref|NP_598884.2| protein SCAF8 [Mus musculus]
gi|81910927|sp|Q6DID3.1|SCAF8_MOUSE RecName: Full=Protein SCAF8; AltName: Full=RNA-binding motif
protein 16; AltName: Full=SR-related and CTD-associated
factor 8
gi|49523355|gb|AAH75621.1| Rbm16 protein [Mus musculus]
Length = 1268
Score = 212 bits (539), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 NVFKSEIIQPLLDMA 135
Score = 123 bits (308), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQD+ +
Sbjct: 468 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDSFR 527
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D D
Sbjct: 528 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLDGFA 585
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 586 EGGMIDQETV 595
>gi|384942960|gb|AFI35085.1| protein SCAF8 [Macaca mulatta]
Length = 1271
Score = 212 bits (539), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 NVFKSEIIQPLLDMA 135
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 468 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 527
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 528 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 585
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 586 EGGMIDQETV 595
>gi|239792480|dbj|BAH72578.1| ACYPI002554 [Acyrthosiphon pisum]
Length = 293
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/145 (70%), Positives = 119/145 (82%), Gaps = 2/145 (1%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +K F EL S+ + KPPISKAK+TAITR+AI+AIK YKHVVQ VEKFI KCKPEYK+
Sbjct: 1 MEAVKAFTFELYSIMEMKPPISKAKMTAITRNAIKAIKLYKHVVQCVEKFIQKCKPEYKI 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVF PRFARNLK TF HL+ C EDKSK+IRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGNDKDVFAPRFARNLKQTFTHLFACAEEDKSKVIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDM-ADPNHPIHRE 143
VFT DII P+FD+ A+P++ H +
Sbjct: 121 AVFTTDIIQPIFDLAANPDYAEHSQ 145
>gi|405976122|gb|EKC40641.1| Putative RNA-binding protein 16 [Crassostrea gigas]
Length = 1191
Score = 211 bits (538), Expect = 2e-52, Method: Composition-based stats.
Identities = 99/148 (66%), Positives = 124/148 (83%), Gaps = 2/148 (1%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ ++ FN ELSSLY+T+PPIS+AK+ +T+ AI+AIKFYKHVVQSVEKFI+KCKPEYKV
Sbjct: 1 MEAVRAFNNELSSLYETRPPISRAKMANVTKCAIKAIKFYKHVVQSVEKFILKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF +N+ ATFQ+L +CP E++SK++RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGQEKDVFAPRFTKNIVATFQNLLKCPAEERSKVVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA-DPNHPIHRELAE 146
VF ++I PL DMA DPN+ H A+
Sbjct: 121 SVFLSEVIQPLLDMASDPNNQQHSLAAQ 148
Score = 130 bits (328), Expect = 4e-28, Method: Composition-based stats.
Identities = 63/128 (49%), Positives = 89/128 (69%), Gaps = 2/128 (1%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTL+IG +SK E+EL +YG + SIN+IPPRGCAFVCM RR++AAKA+ ++
Sbjct: 431 SICSTTLFIGKISKTTSEDELRAELEKYGSLESINMIPPRGCAFVCMTRRKEAAKAVDRM 490
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDE 274
K G + +AWAPG G+K+ +KD W+V+ G +YIP+ L + D L DGG+ DE
Sbjct: 491 KGMLFNGSELRVAWAPGIGVKESAFKDKWDVEVGATYIPWSSLPE--DLSSLIDGGIIDE 548
Query: 275 DTVPLWLK 282
D++P LK
Sbjct: 549 DSLPENLK 556
>gi|301603758|ref|XP_002931573.1| PREDICTED: putative RNA-binding protein 16 isoform 1 [Xenopus
(Silurana) tropicalis]
gi|301603760|ref|XP_002931574.1| PREDICTED: putative RNA-binding protein 16 isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 1271
Score = 211 bits (538), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 116/135 (85%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D +PPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKTFNSELYSLNDYRPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF QDKD+F PRF+ N+ TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGQDKDLFAPRFSNNIINTFQNLYRCPADDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 NVFKSEIIQPLLDMA 135
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 92/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQD+ +
Sbjct: 465 RSKTLSVCSTTLWVGQVDKKATQQDLTNVFEEFGQIESINMIPPRGCAYVCMVHRQDSYR 524
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL ++ K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 525 ALQKLSSSSCKIGSKIIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 582
Query: 268 DGGVFDEDTV 277
+GG+ D+++V
Sbjct: 583 EGGMIDQESV 592
>gi|190016424|pdb|3D9J|A Chain A, Snapshots Of The Rna Processing Factor Scaf8 Bound To
Different Phosphorylated Forms Of The Carboxy-Terminal
Domain Of Rna-Polymerase Ii
gi|190016425|pdb|3D9J|B Chain B, Snapshots Of The Rna Processing Factor Scaf8 Bound To
Different Phosphorylated Forms Of The Carboxy-Terminal
Domain Of Rna-Polymerase Ii
gi|190016426|pdb|3D9K|A Chain A, Snapshots Of The Rna Processing Factor Scaf8 Bound To
Different Phosphorylated Forms Of The Carboxy-Terminal
Domain Of Rna-Polymerase Ii
gi|190016427|pdb|3D9K|B Chain B, Snapshots Of The Rna Processing Factor Scaf8 Bound To
Different Phosphorylated Forms Of The Carboxy-Terminal
Domain Of Rna-Polymerase Ii
gi|190016430|pdb|3D9L|A Chain A, Snapshots Of The Rna Processing Factor Scaf8 Bound To
Different Phosphorylated Forms Of The Carboxy-Terminal
Domain Of Rna-Polymerase Ii
gi|190016431|pdb|3D9L|B Chain B, Snapshots Of The Rna Processing Factor Scaf8 Bound To
Different Phosphorylated Forms Of The Carboxy-Terminal
Domain Of Rna-Polymerase Ii
gi|190016434|pdb|3D9M|A Chain A, Snapshots Of The Rna Processing Factor Scaf8 Bound To
Different Phosphorylated Forms Of The Carboxy-Terminal
Domain Of Rna-Polymerase Ii
gi|190016435|pdb|3D9M|B Chain B, Snapshots Of The Rna Processing Factor Scaf8 Bound To
Different Phosphorylated Forms Of The Carboxy-Terminal
Domain Of Rna-Polymerase Ii
gi|190016438|pdb|3D9N|A Chain A, Snapshots Of The Rna Processing Factor Scaf8 Bound To
Different Phosphorylated Forms Of The Carboxy-Terminal
Domain Of Rna-Polymerase Ii
gi|190016439|pdb|3D9N|B Chain B, Snapshots Of The Rna Processing Factor Scaf8 Bound To
Different Phosphorylated Forms Of The Carboxy-Terminal
Domain Of Rna-Polymerase Ii
Length = 145
Score = 211 bits (537), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 101/135 (74%), Positives = 117/135 (86%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 NVFKSEIIQPLLDMA 135
>gi|348517487|ref|XP_003446265.1| PREDICTED: protein SCAF8-like [Oreochromis niloticus]
Length = 1364
Score = 211 bits (536), Expect = 4e-52, Method: Composition-based stats.
Identities = 100/135 (74%), Positives = 115/135 (85%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +K FN EL SL + KPPISKAK+T IT+S I+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKAFNNELYSLNEYKPPISKAKMTQITKSGIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF +KDVF PRF++N+ +TFQHLY+CP +DKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTEKDVFAPRFSKNIISTFQHLYRCPSDDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF DII PL DMA
Sbjct: 121 AVFKSDIIQPLLDMA 135
Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats.
Identities = 57/130 (43%), Positives = 90/130 (69%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA++CM RQDA +
Sbjct: 465 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYICMVHRQDAYR 524
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
A KL K+ K I +AWA KG+K +++K FW+V GV+YIP++++ + D D
Sbjct: 525 ARQKLSTGTFKIGSKIIKIAWALNKGVK-QEYKQFWDVDLGVTYIPWEKVKLD-DLDGFA 582
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 583 EGGIIDQETV 592
>gi|165970536|gb|AAI58405.1| Unknown (protein for IMAGE:7563835) [Xenopus (Silurana) tropicalis]
Length = 390
Score = 210 bits (535), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 99/133 (74%), Positives = 114/133 (85%), Gaps = 1/133 (0%)
Query: 3 VIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPA 62
+KTFN EL SL D +PPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP
Sbjct: 1 AVKTFNSELYSLNDYRPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPG 60
Query: 63 LYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEV 121
LYVIDS+VRQSRHQF QDKD+F PRF+ N+ TFQ+LY+CP +DKSKI+RVLNLWQKN V
Sbjct: 61 LYVIDSIVRQSRHQFGQDKDLFAPRFSNNIINTFQNLYRCPADDKSKIVRVLNLWQKNNV 120
Query: 122 FTPDIIHPLFDMA 134
F +II PL DMA
Sbjct: 121 FKSEIIQPLLDMA 133
>gi|193579948|ref|XP_001951100.1| PREDICTED: hypothetical protein LOC100161323 [Acyrthosiphon pisum]
Length = 1542
Score = 210 bits (534), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 102/151 (67%), Positives = 121/151 (80%), Gaps = 2/151 (1%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +K F EL S+ + KPPISKAK+TAITR+AI+AIK YKHVVQ VEKFI KCKPEYK+
Sbjct: 1 MEAVKAFTFELYSIMEMKPPISKAKMTAITRNAIKAIKLYKHVVQCVEKFIQKCKPEYKI 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVF PRFARNLK TF HL+ C EDKSK+IRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGNDKDVFAPRFARNLKQTFTHLFACAEEDKSKVIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDM-ADPNHPIHRELAEIQA 149
VFT DII P+FD+ A+P++ H + + +
Sbjct: 121 AVFTTDIIQPIFDLAANPDYAEHSQTNPLSS 151
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 81/127 (63%), Positives = 107/127 (84%)
Query: 156 MCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLK 215
+ STTLW+GHLSKL+ +++L F GD+VS+NLI PRGCAF+CMNRRQDAA+ + K +
Sbjct: 461 VVSTTLWVGHLSKLIHQDDLYGLFQPIGDIVSLNLISPRGCAFLCMNRRQDAARIMSKYQ 520
Query: 216 NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDED 275
+LQGK +T+AWAPG+ MKDK+WKD+WE++DGVSYIP+++L+KEIDYD LE GG+ DED
Sbjct: 521 GERLQGKPMTIAWAPGQAMKDKEWKDYWEIEDGVSYIPWEKLNKEIDYDELEVGGMLDED 580
Query: 276 TVPLWLK 282
T+P WLK
Sbjct: 581 TMPEWLK 587
>gi|74192157|dbj|BAE34282.1| unnamed protein product [Mus musculus]
Length = 279
Score = 209 bits (533), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 116/135 (85%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDV PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGQEKDVLAPRFSNNIISTFQNLYRCPXDDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 NVFKSEIIQPLLDMA 135
>gi|390364174|ref|XP_784032.3| PREDICTED: uncharacterized protein LOC578790 [Strongylocentrotus
purpuratus]
Length = 1659
Score = 209 bits (533), Expect = 8e-52, Method: Composition-based stats.
Identities = 96/137 (70%), Positives = 118/137 (86%), Gaps = 1/137 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +K FN ELSSLY+ KPPIS+AK+T++T+SAI+AIK YKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKHFNNELSSLYEVKPPISRAKMTSVTKSAIKAIKLYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF +KDVF PRF +N+ ATF HL++CP +D++KI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGAEKDVFAPRFLKNIHATFLHLFKCPTDDRAKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADP 136
V+ D+I PL DMA+P
Sbjct: 121 VVYGEDVIQPLLDMANP 137
Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats.
Identities = 57/124 (45%), Positives = 90/124 (72%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+G L+K + E ++ EYG+++S+ +I RGCA+VCM +RQ+A K L K+
Sbjct: 520 SVCSTTLWLGRLAKSIAESDIRTLIAEYGEIISVEIIGTRGCAYVCMAKRQEAHKTLKKI 579
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDE 274
K+ +L G + +AWA GKGMKD ++K++W+V+ GVSYIP+D L +Y+ + G + DE
Sbjct: 580 KDVRLHGNNLKVAWALGKGMKDANYKEYWDVEKGVSYIPWDELPSSGNYEVIAQGAMIDE 639
Query: 275 DTVP 278
+T+P
Sbjct: 640 ETMP 643
>gi|417413665|gb|JAA53150.1| Putative rna polymerase ii c-terminal domain-binding protein ra4,
partial [Desmodus rotundus]
Length = 1217
Score = 209 bits (533), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 116/135 (85%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +K FN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 20 MEAVKIFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 79
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 80 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 139
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 140 NVFKSEIIQPLLDMA 154
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 487 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 546
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 547 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 604
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 605 EGGMIDQETV 614
>gi|380798091|gb|AFE70921.1| protein SCAF8, partial [Macaca mulatta]
Length = 1268
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/132 (75%), Positives = 115/132 (87%), Gaps = 1/132 (0%)
Query: 4 IKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPAL 63
+KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP L
Sbjct: 1 VKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGL 60
Query: 64 YVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVF 122
YVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF
Sbjct: 61 YVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVF 120
Query: 123 TPDIIHPLFDMA 134
+II PL DMA
Sbjct: 121 KSEIIQPLLDMA 132
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 465 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 524
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 525 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 582
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 583 EGGMIDQETV 592
>gi|26339218|dbj|BAC33280.1| unnamed protein product [Mus musculus]
Length = 159
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 GVFKIEIIQPLLDMA 135
>gi|190016445|pdb|3D9P|A Chain A, Snapshots Of The Rna Processing Factor Scaf8 Bound To
Different Phosphorylated Forms Of The Carboxy-Terminal
Domain Of Rna-Polymerase Ii
gi|190016446|pdb|3D9P|B Chain B, Snapshots Of The Rna Processing Factor Scaf8 Bound To
Different Phosphorylated Forms Of The Carboxy-Terminal
Domain Of Rna-Polymerase Ii
Length = 145
Score = 209 bits (531), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 116/135 (85%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+ VLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVTVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 NVFKSEIIQPLLDMA 135
>gi|332229446|ref|XP_003263898.1| PREDICTED: splicing factor, arginine/serine-rich 15 isoform 1
[Nomascus leucogenys]
Length = 1233
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 87 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 146
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 147 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 206
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 207 GVFKIEIIQPLLDMA 221
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 583 QVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 642
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 643 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELES 700
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 701 FCEGGMLDSDTLNPDW 716
>gi|410898252|ref|XP_003962612.1| PREDICTED: protein SCAF8-like [Takifugu rubripes]
Length = 1389
Score = 208 bits (530), Expect = 2e-51, Method: Composition-based stats.
Identities = 100/135 (74%), Positives = 115/135 (85%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +K FN EL SL + KPPISKAK+T IT+S I+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKAFNIELYSLNEYKPPISKAKMTQITKSGIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF +KDVF PRF++N+ ATFQHLY+CP +DKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGAEKDVFAPRFSKNIIATFQHLYRCPSDDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF DII PL D+A
Sbjct: 121 AVFKSDIIQPLLDLA 135
Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats.
Identities = 57/130 (43%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA++CM RQDA +
Sbjct: 468 RSRTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYICMVHRQDAYR 527
Query: 210 ALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
A KL + K+ K I +AWA KG+K +++K FW+V GV+YIP++++ + D D
Sbjct: 528 ARQKLSTGSFKIGSKVIKIAWALNKGVK-QEYKQFWDVDLGVTYIPWEKVKVD-DLDGFA 585
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 586 EGGIIDQETV 595
>gi|332229448|ref|XP_003263899.1| PREDICTED: splicing factor, arginine/serine-rich 15 isoform 2
[Nomascus leucogenys]
Length = 1211
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 87 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 146
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 147 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 206
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 207 GVFKIEIIQPLLDMA 221
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 583 QVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 642
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 643 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELES 700
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 701 FCEGGMLDSDTLNPDW 716
>gi|296232050|ref|XP_002761407.1| PREDICTED: splicing factor, arginine/serine-rich 15 isoform 1
[Callithrix jacchus]
Length = 1149
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 GVFKIEIIQPLLDMA 135
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 496 QVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 555
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 556 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELES 613
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 614 FCEGGMLDSDTLNPDW 629
>gi|90078092|dbj|BAE88726.1| unnamed protein product [Macaca fascicularis]
Length = 439
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 GVFKIEIIQPLLDMA 135
>gi|297707801|ref|XP_002830674.1| PREDICTED: splicing factor, arginine/serine-rich 15 isoform 1
[Pongo abelii]
Length = 1148
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 GVFKIEIIQPLLDMA 135
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 497 QVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 556
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 557 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELES 614
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 615 FCEGGMLDSDTLNPDW 630
>gi|40789229|ref|NP_065757.1| splicing factor, arginine/serine-rich 15 isoform 1 [Homo sapiens]
gi|332871676|ref|XP_003319088.1| PREDICTED: splicing factor, arginine/serine-rich 15 isoform 1 [Pan
troglodytes]
gi|397484212|ref|XP_003813272.1| PREDICTED: splicing factor, arginine/serine-rich 15 isoform 1 [Pan
paniscus]
gi|59803073|sp|O95104.3|SFR15_HUMAN RecName: Full=Splicing factor, arginine/serine-rich 15; AltName:
Full=CTD-binding SR-like protein RA4; AltName:
Full=SR-related and CTD-associated factor 4
gi|40674115|gb|AAH64990.1| Splicing factor, arginine/serine-rich 15 [Homo sapiens]
gi|112180488|gb|AAH52286.1| Splicing factor, arginine/serine-rich 15 [Homo sapiens]
gi|112180758|gb|AAH14921.1| Splicing factor, arginine/serine-rich 15 [Homo sapiens]
gi|119630293|gb|EAX09888.1| splicing factor, arginine/serine-rich 15, isoform CRA_e [Homo
sapiens]
gi|410221212|gb|JAA07825.1| SR-related CTD-associated factor 4 [Pan troglodytes]
gi|410258430|gb|JAA17182.1| SR-related CTD-associated factor 4 [Pan troglodytes]
gi|410303866|gb|JAA30533.1| SR-related CTD-associated factor 4 [Pan troglodytes]
gi|410350949|gb|JAA42078.1| SR-related CTD-associated factor 4 [Pan troglodytes]
Length = 1147
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 GVFKIEIIQPLLDMA 135
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 497 QVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 556
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 557 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELES 614
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 615 FCEGGMLDSDTLNPDW 630
>gi|112180475|gb|AAH43353.1| Splicing factor, arginine/serine-rich 15 [Homo sapiens]
Length = 1146
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 GVFKIEIIQPLLDMA 135
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 497 QVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 556
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 557 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELES 614
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 615 FCEGGMLDSDTLNPDW 630
>gi|359062148|ref|XP_002707732.2| PREDICTED: splicing factor, arginine/serine-rich 15 [Bos taurus]
Length = 1143
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 GVFKIEIIQPLLDMA 135
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 95/143 (66%), Gaps = 7/143 (4%)
Query: 141 HRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVC 200
+ L +I+A ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++
Sbjct: 491 QKGLPQIKAETA--SVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIV 548
Query: 201 MNRRQDAAKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLS 258
M RQDA +AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++
Sbjct: 549 MVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVK 607
Query: 259 KEIDYDYLEDGGVFDEDTV-PLW 280
E + + +GG+ D DT+ P W
Sbjct: 608 PE-ELESFCEGGMLDSDTLNPDW 629
>gi|358410069|ref|XP_614113.5| PREDICTED: splicing factor, arginine/serine-rich 15 [Bos taurus]
Length = 1143
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 GVFKIEIIQPLLDMA 135
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 95/143 (66%), Gaps = 7/143 (4%)
Query: 141 HRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVC 200
+ L +I+A ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++
Sbjct: 491 QKGLPQIKAETA--SVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIV 548
Query: 201 MNRRQDAAKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLS 258
M RQDA +AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++
Sbjct: 549 MVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVK 607
Query: 259 KEIDYDYLEDGGVFDEDTV-PLW 280
E + + +GG+ D DT+ P W
Sbjct: 608 PE-ELESFCEGGMLDSDTLNPDW 629
>gi|402862486|ref|XP_003895589.1| PREDICTED: splicing factor, arginine/serine-rich 15 isoform 1
[Papio anubis]
Length = 1153
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 GVFKIEIIQPLLDMA 135
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 495 QVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 554
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 555 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELES 612
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 613 FCEGGMLDSDTLNPDW 628
>gi|350592132|ref|XP_003358973.2| PREDICTED: splicing factor, arginine/serine-rich 15 [Sus scrofa]
Length = 1154
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 GVFKIEIIQPLLDMA 135
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 89/129 (68%), Gaps = 5/129 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA +AL KL
Sbjct: 511 SVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKL 570
Query: 215 K--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVF 272
N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + + +GG+
Sbjct: 571 SRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELESFCEGGML 628
Query: 273 DEDTV-PLW 280
D DT+ P W
Sbjct: 629 DSDTLNPDW 637
>gi|402862488|ref|XP_003895590.1| PREDICTED: splicing factor, arginine/serine-rich 15 isoform 2
[Papio anubis]
Length = 1131
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 GVFKIEIIQPLLDMA 135
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 495 QVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 554
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 555 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELES 612
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 613 FCEGGMLDSDTLNPDW 628
>gi|224451135|ref|NP_001138917.1| splicing factor, arginine/serine-rich 15 isoform 3 [Homo sapiens]
gi|332871678|ref|XP_003319089.1| PREDICTED: splicing factor, arginine/serine-rich 15 isoform 2 [Pan
troglodytes]
gi|397484214|ref|XP_003813273.1| PREDICTED: splicing factor, arginine/serine-rich 15 isoform 2 [Pan
paniscus]
gi|52545884|emb|CAD38974.2| hypothetical protein [Homo sapiens]
gi|119630290|gb|EAX09885.1| splicing factor, arginine/serine-rich 15, isoform CRA_b [Homo
sapiens]
gi|410221210|gb|JAA07824.1| SR-related CTD-associated factor 4 [Pan troglodytes]
gi|410258428|gb|JAA17181.1| SR-related CTD-associated factor 4 [Pan troglodytes]
gi|410303864|gb|JAA30532.1| SR-related CTD-associated factor 4 [Pan troglodytes]
gi|410350947|gb|JAA42077.1| SR-related CTD-associated factor 4 [Pan troglodytes]
Length = 1125
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 GVFKIEIIQPLLDMA 135
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 497 QVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 556
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 557 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELES 614
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 615 FCEGGMLDSDTLNPDW 630
>gi|297707805|ref|XP_002830676.1| PREDICTED: splicing factor, arginine/serine-rich 15 isoform 3
[Pongo abelii]
Length = 1126
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 GVFKIEIIQPLLDMA 135
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 497 QVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 556
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 557 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELES 614
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 615 FCEGGMLDSDTLNPDW 630
>gi|189163477|ref|NP_001032424.2| splicing factor, arginine/serine-rich 15 [Rattus norvegicus]
Length = 1200
Score = 208 bits (530), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 112/135 (82%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF+ N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSENITATFQYLYLCPSEDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 GVFKIEIIQPLLDMA 135
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 92/136 (67%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q ++ ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 563 QIKSETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 622
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 623 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADFKQYWDVELGVTYIPWDKVKAE-ELES 680
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 681 FCEGGMLDSDTLNPDW 696
>gi|403271831|ref|XP_003927808.1| PREDICTED: splicing factor, arginine/serine-rich 15 [Saimiri
boliviensis boliviensis]
Length = 1123
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 GVFKIEIIQPLLDMA 135
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/136 (41%), Positives = 81/136 (59%), Gaps = 6/136 (4%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K G G +IPPRGCA++ M RQDA
Sbjct: 497 QVKPETASVCSTTLWVGQLDKRTTHAAGGRING-LGATCGPQMIPPRGCAYIVMVHRQDA 555
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 556 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELES 613
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 614 FCEGGMLDSDTLNPDW 629
>gi|109065525|ref|XP_001097429.1| PREDICTED: splicing factor, arginine/serine-rich 15 isoform 2
[Macaca mulatta]
Length = 1131
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 GVFKIEIIQPLLDMA 135
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 495 QVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 554
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 555 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELES 612
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 613 FCEGGMLDSDTLNPDW 628
>gi|119630289|gb|EAX09884.1| splicing factor, arginine/serine-rich 15, isoform CRA_a [Homo
sapiens]
Length = 853
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 GVFKIEIIQPLLDMA 135
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 497 QVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 556
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 557 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELES 614
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 615 FCEGGMLDSDTLNPDW 630
>gi|296232054|ref|XP_002761409.1| PREDICTED: splicing factor, arginine/serine-rich 15 isoform 3
[Callithrix jacchus]
Length = 1127
Score = 208 bits (529), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 GVFKIEIIQPLLDMA 135
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 496 QVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 555
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 556 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELES 613
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 614 FCEGGMLDSDTLNPDW 629
>gi|426392828|ref|XP_004062741.1| PREDICTED: splicing factor, arginine/serine-rich 15 [Gorilla
gorilla gorilla]
Length = 1020
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 GVFKIEIIQPLLDMA 135
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 497 QVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 556
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 557 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELES 614
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 615 FCEGGMLDSDTLNPDW 630
>gi|147903599|ref|NP_001089259.1| SR-related CTD-associated factor 8 [Xenopus laevis]
gi|58402657|gb|AAH89292.1| MGC84961 protein [Xenopus laevis]
Length = 1271
Score = 207 bits (528), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 99/135 (73%), Positives = 115/135 (85%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKF+ KCKPEYKV
Sbjct: 1 MDAVKTFNTELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFVQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
LYVIDS+VRQSRHQF QDKD+F PRF+ N+ TFQ+LY+CP ++KSKI+RVLNLWQKN
Sbjct: 61 SGLYVIDSIVRQSRHQFGQDKDLFAPRFSNNIINTFQNLYRCPADEKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 NVFKSEIIQPLLDMA 135
Score = 121 bits (304), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/130 (43%), Positives = 92/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQD+ +
Sbjct: 466 RSKTLSVCSTTLWVGQVDKKATQQDLTNVFEEFGQIESINMIPPRGCAYVCMVHRQDSYR 525
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL ++ K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 526 ALQKLSSSSCKIGSKIIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 583
Query: 268 DGGVFDEDTV 277
+GG+ D+++V
Sbjct: 584 EGGMIDQESV 593
>gi|50510825|dbj|BAD32398.1| mKIAA1172 protein [Mus musculus]
Length = 1200
Score = 207 bits (526), Expect = 5e-51, Method: Composition-based stats.
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 18 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 77
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 78 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 137
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 138 GVFKIEIIQPLLDMA 152
Score = 119 bits (298), Expect = 2e-24, Method: Composition-based stats.
Identities = 59/136 (43%), Positives = 92/136 (67%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q ++ ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 576 QIKSETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 635
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 636 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKAE-ELES 693
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 694 FCEGGMLDSDTLNPDW 709
>gi|148665971|gb|EDK98387.1| mCG129573, isoform CRA_b [Mus musculus]
Length = 1200
Score = 206 bits (525), Expect = 6e-51, Method: Composition-based stats.
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 18 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 77
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 78 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 137
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 138 GVFKIEIIQPLLDMA 152
Score = 119 bits (297), Expect = 2e-24, Method: Composition-based stats.
Identities = 59/136 (43%), Positives = 92/136 (67%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q ++ ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 575 QIKSETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 634
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 635 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKAE-ELES 692
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 693 FCEGGMLDSDTLNPDW 708
>gi|71895913|ref|NP_001025649.1| SR-related CTD-associated factor 4 [Xenopus (Silurana) tropicalis]
gi|60552482|gb|AAH91642.1| splicing factor, arginine/serine-rich 15 [Xenopus (Silurana)
tropicalis]
Length = 482
Score = 206 bits (525), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 100/134 (74%), Positives = 110/134 (82%), Gaps = 1/134 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQFQ-DKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF +NL ATFQ LY CP EDKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGIDKDVFGPRFTKNLTATFQCLYTCPSEDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDM 133
VF +II PL DM
Sbjct: 121 GVFKIEIIQPLLDM 134
>gi|109150409|ref|NP_849254.2| splicing factor, arginine/serine-rich 15 [Mus musculus]
gi|34784233|gb|AAH57592.1| Splicing factor, arginine/serine-rich 15 [Mus musculus]
Length = 1209
Score = 206 bits (524), Expect = 8e-51, Method: Composition-based stats.
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 GVFKIEIIQPLLDMA 135
Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats.
Identities = 59/136 (43%), Positives = 92/136 (67%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q ++ ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 562 QIKSETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 621
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 622 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKAE-ELES 679
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 680 FCEGGMLDSDTLNPDW 695
>gi|31418605|gb|AAH53096.1| Sfrs15 protein [Mus musculus]
Length = 1183
Score = 206 bits (524), Expect = 1e-50, Method: Composition-based stats.
Identities = 100/135 (74%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 GVFKIEIIQPLLDMA 135
Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats.
Identities = 59/136 (43%), Positives = 92/136 (67%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q ++ ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 558 QIKSETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 617
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 618 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKAE-ELES 675
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 676 FCEGGMLDSDTLNPDW 691
>gi|20806133|ref|NP_620794.1| protein SCAF8 [Rattus norvegicus]
gi|81910576|sp|Q63623.1|SCAF8_RAT RecName: Full=Protein SCAF8; AltName: Full=RNA-binding motif
protein 16; AltName: Full=SR-related and CTD-associated
factor 8
gi|1438530|gb|AAC52656.1| rA8 [Rattus norvegicus]
Length = 1268
Score = 206 bits (523), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/135 (73%), Positives = 115/135 (85%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQ Q+KDV PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQVGQEKDVCAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 NVFKSEIIQPLLDMA 135
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQD+ +
Sbjct: 468 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDSFR 527
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D D
Sbjct: 528 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLDGFA 585
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 586 EGGMIDQETV 595
>gi|432940027|ref|XP_004082681.1| PREDICTED: protein SCAF8-like [Oryzias latipes]
Length = 1385
Score = 206 bits (523), Expect = 1e-50, Method: Composition-based stats.
Identities = 99/135 (73%), Positives = 114/135 (84%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +K FN EL SL + +PPISKAK+T IT+S I+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 1 MEAVKAFNNELYSLNEYRPPISKAKMTQITKSGIKAIKFYKHVVQSVEKFIQKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF +KDVF PRF++N+ TFQHLY+CP +DKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTEKDVFAPRFSKNIILTFQHLYRCPSDDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF DII PL DMA
Sbjct: 121 AVFKSDIIQPLLDMA 135
Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats.
Identities = 57/130 (43%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA++CM RQDA +
Sbjct: 466 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYICMVHRQDAYR 525
Query: 210 ALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
A KL + K+ K I +AWA KG+K +++K FW+V GV+YIP++++ + D D
Sbjct: 526 ARQKLSTGSFKISSKIIKIAWALNKGVK-QEYKQFWDVDLGVTYIPWEKVKVD-DLDGFA 583
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 584 EGGIIDQETV 593
>gi|190016442|pdb|3D9O|A Chain A, Snapshots Of The Rna Processing Factor Scaf8 Bound To
Different Phosphorylated Forms Of The Carboxy-Terminal
Domain Of Rna-Polymerase Ii
gi|190016443|pdb|3D9O|B Chain B, Snapshots Of The Rna Processing Factor Scaf8 Bound To
Different Phosphorylated Forms Of The Carboxy-Terminal
Domain Of Rna-Polymerase Ii
Length = 145
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/134 (73%), Positives = 114/134 (85%), Gaps = 1/134 (0%)
Query: 2 DVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVP 61
+ +KTFN EL SL D KPPISKAK T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP
Sbjct: 2 EAVKTFNSELYSLXDXKPPISKAKXTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVP 61
Query: 62 ALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNE 120
LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 62 GLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNN 121
Query: 121 VFTPDIIHPLFDMA 134
VF +II PL D A
Sbjct: 122 VFKSEIIQPLLDXA 135
>gi|61098260|ref|NP_001012840.1| splicing factor, arginine/serine-rich 15 [Gallus gallus]
gi|60098513|emb|CAH65087.1| hypothetical protein RCJMB04_3h16 [Gallus gallus]
Length = 1092
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/135 (72%), Positives = 113/135 (83%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ + FNQEL SL + KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 1 MEAVNAFNQELFSLMEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 121 GVFKIEIIQPLLDMA 135
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 88/129 (68%), Gaps = 5/129 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+G L K ++++ E+G + SIN+IPPRGCA++ M RQDA +AL KL
Sbjct: 492 SVCSTTLWVGQLDKRTTQQDVGSLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKL 551
Query: 215 K--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVF 272
N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E D + +GG+
Sbjct: 552 SRGNFKVNQKSIKIAWALNKGIK-PDYKQYWDVELGVTYIPWDKVKPE-DLESFCEGGML 609
Query: 273 DEDTV-PLW 280
D +T+ P W
Sbjct: 610 DNETLSPEW 618
>gi|4102967|gb|AAD09327.1| pre-mRNA splicing SR protein rA4 [Homo sapiens]
Length = 1157
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/134 (73%), Positives = 112/134 (83%), Gaps = 1/134 (0%)
Query: 2 DVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVP 61
D + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP
Sbjct: 12 DAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVP 71
Query: 62 ALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNE 120
LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 72 GLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNG 131
Query: 121 VFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 132 VFKIEIIQPLLDMA 145
Score = 110 bits (276), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 57/136 (41%), Positives = 87/136 (63%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 507 QVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVYRQDA 566
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+A+ KL N K+ K+I +AWA KG+K D+K +W+V+ V YIP D + E + +
Sbjct: 567 YRAVQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELCVIYIPCDNVKPE-EMES 624
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 625 FYEGGMLDSDTLNPDW 640
>gi|195346333|ref|XP_002039720.1| GM15744 [Drosophila sechellia]
gi|194135069|gb|EDW56585.1| GM15744 [Drosophila sechellia]
Length = 132
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 94/132 (71%), Positives = 112/132 (84%), Gaps = 1/132 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ + FN ELS LYD++PPISKAK+ AIT+SA+RAIK YKHVVQSVEKFI+KCKPEYKV
Sbjct: 1 METVVAFNNELSGLYDSRPPISKAKMAAITKSAMRAIKLYKHVVQSVEKFILKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQ+ DKD+F PRF RNL TF +L++C PEDKS+IIRVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQYGMDKDLFAPRFQRNLTETFANLFRCAPEDKSRIIRVLNLWQKN 120
Query: 120 EVFTPDIIHPLF 131
VF ++I P+F
Sbjct: 121 NVFKSEVIQPIF 132
>gi|355748808|gb|EHH53291.1| hypothetical protein EGM_13902, partial [Macaca fascicularis]
Length = 1271
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 97/132 (73%), Positives = 114/132 (86%), Gaps = 1/132 (0%)
Query: 4 IKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPAL 63
+K +N +L SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP L
Sbjct: 4 LKVYNSQLYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGL 63
Query: 64 YVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVF 122
YVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF
Sbjct: 64 YVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVF 123
Query: 123 TPDIIHPLFDMA 134
+II PL DMA
Sbjct: 124 KSEIIQPLLDMA 135
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 468 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 527
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 528 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 585
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 586 EGGMIDQETV 595
>gi|355561960|gb|EHH18592.1| hypothetical protein EGK_15235, partial [Macaca mulatta]
Length = 1271
Score = 204 bits (518), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 97/132 (73%), Positives = 114/132 (86%), Gaps = 1/132 (0%)
Query: 4 IKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPAL 63
+K +N +L SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP L
Sbjct: 4 LKVYNSQLYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGL 63
Query: 64 YVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVF 122
YVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF
Sbjct: 64 YVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVF 123
Query: 123 TPDIIHPLFDMA 134
+II PL DMA
Sbjct: 124 KSEIIQPLLDMA 135
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 468 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 527
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 528 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 585
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 586 EGGMIDQETV 595
>gi|296491707|tpg|DAA33740.1| TPA: splicing factor, arginine/serine-rich 15-like [Bos taurus]
Length = 1376
Score = 202 bits (515), Expect = 1e-49, Method: Composition-based stats.
Identities = 98/132 (74%), Positives = 111/132 (84%), Gaps = 1/132 (0%)
Query: 4 IKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPAL 63
+ FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP L
Sbjct: 260 VNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGL 319
Query: 64 YVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVF 122
YVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN VF
Sbjct: 320 YVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVF 379
Query: 123 TPDIIHPLFDMA 134
+II PL DMA
Sbjct: 380 KIEIIQPLLDMA 391
Score = 118 bits (296), Expect = 3e-24, Method: Composition-based stats.
Identities = 61/143 (42%), Positives = 95/143 (66%), Gaps = 7/143 (4%)
Query: 141 HRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVC 200
+ L +I+A ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++
Sbjct: 747 QKGLPQIKAETA--SVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIV 804
Query: 201 MNRRQDAAKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLS 258
M RQDA +AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++
Sbjct: 805 MVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVK 863
Query: 259 KEIDYDYLEDGGVFDEDTV-PLW 280
E + + +GG+ D DT+ P W
Sbjct: 864 PE-ELESFCEGGMLDSDTLNPDW 885
>gi|291397172|ref|XP_002714994.1| PREDICTED: RNA-binding motif protein 16 [Oryctolagus cuniculus]
Length = 1286
Score = 202 bits (514), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/135 (73%), Positives = 115/135 (85%), Gaps = 2/135 (1%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
+ + TFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKV
Sbjct: 16 LQSLATFN-ELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKV 74
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN
Sbjct: 75 PGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKN 134
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 135 NVFKSEIIQPLLDMA 149
Score = 124 bits (311), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 482 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 541
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D D
Sbjct: 542 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLDGFA 599
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 600 EGGMIDQETV 609
>gi|347969784|ref|XP_003436461.1| AGAP003369-PB [Anopheles gambiae str. PEST]
gi|333469269|gb|EGK97234.1| AGAP003369-PB [Anopheles gambiae str. PEST]
Length = 1272
Score = 201 bits (511), Expect = 3e-49, Method: Composition-based stats.
Identities = 85/128 (66%), Positives = 110/128 (85%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+GHLSKLVQ+EELSDTFG+YGD+VSI++IPPRGCAF+ MNRRQDA K + L
Sbjct: 331 SVCSTTLWVGHLSKLVQQEELSDTFGKYGDIVSIDMIPPRGCAFIVMNRRQDAFKCMQSL 390
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDE 274
KN K+ G+TIT++WA GKG+K K+WKD+W++ GVSYIP+ +LS D + LEDGG+FDE
Sbjct: 391 KNHKMHGRTITISWAAGKGVKSKEWKDYWDLDLGVSYIPWSKLSPSTDLETLEDGGMFDE 450
Query: 275 DTVPLWLK 282
DT+P W+K
Sbjct: 451 DTIPQWMK 458
Score = 42.4 bits (98), Expect = 0.24, Method: Composition-based stats.
Identities = 14/23 (60%), Positives = 21/23 (91%)
Query: 121 VFTPDIIHPLFDMADPNHPIHRE 143
VF P++I PLFD+A+P+HPIH++
Sbjct: 2 VFLPEVIQPLFDLANPDHPIHQQ 24
>gi|326915761|ref|XP_003204181.1| PREDICTED: protein SCAF8-like [Meleagris gallopavo]
Length = 1378
Score = 200 bits (508), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 96/126 (76%), Positives = 110/126 (87%), Gaps = 1/126 (0%)
Query: 10 ELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSL 69
EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP LYVIDS+
Sbjct: 104 ELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSI 163
Query: 70 VRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIH 128
VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF +II
Sbjct: 164 VRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQ 223
Query: 129 PLFDMA 134
PL DMA
Sbjct: 224 PLLDMA 229
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 563 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAYR 622
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GVSYIP++++ K D +
Sbjct: 623 ALQKLSSGSYKIGSKIIKIAWALNKGVK-TEYKQFWDVDLGVSYIPWEKV-KLDDLEGFA 680
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 681 EGGMIDQETV 690
>gi|221044394|dbj|BAH13874.1| unnamed protein product [Homo sapiens]
Length = 1337
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/156 (64%), Positives = 117/156 (75%), Gaps = 22/156 (14%)
Query: 1 MDVIKTFNQE---------------------LSSLYDTKPPISKAKITAITRSAIRAIKF 39
M+ +KTFN E L SL D KPPISKAK+T IT++AI+AIKF
Sbjct: 46 MEAVKTFNSEDCASTPACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKF 105
Query: 40 YKHVVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHL 98
YKHVVQSVEKFI KCKPEYKVP LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+L
Sbjct: 106 YKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNL 165
Query: 99 YQCPPEDKSKIIRVLNLWQKNEVFTPDIIHPLFDMA 134
Y+CP +DKSKI+RVLNLWQKN VF +II PL DMA
Sbjct: 166 YRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMA 201
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 534 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 593
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 594 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 651
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 652 EGGMIDQETV 661
>gi|332825311|ref|XP_003311603.1| PREDICTED: protein SCAF8 isoform 2 [Pan troglodytes]
Length = 1337
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/156 (64%), Positives = 117/156 (75%), Gaps = 22/156 (14%)
Query: 1 MDVIKTFNQE---------------------LSSLYDTKPPISKAKITAITRSAIRAIKF 39
M+ +KTFN E L SL D KPPISKAK+T IT++AI+AIKF
Sbjct: 46 MEAVKTFNSEDCASTPACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKF 105
Query: 40 YKHVVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHL 98
YKHVVQSVEKFI KCKPEYKVP LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+L
Sbjct: 106 YKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNL 165
Query: 99 YQCPPEDKSKIIRVLNLWQKNEVFTPDIIHPLFDMA 134
Y+CP +DKSKI+RVLNLWQKN VF +II PL DMA
Sbjct: 166 YRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMA 201
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 534 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 593
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 594 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 651
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 652 EGGMIDQETV 661
>gi|431904530|gb|ELK09912.1| Putative RNA-binding protein 16 [Pteropus alecto]
Length = 1366
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/156 (64%), Positives = 117/156 (75%), Gaps = 22/156 (14%)
Query: 1 MDVIKTFNQE---------------------LSSLYDTKPPISKAKITAITRSAIRAIKF 39
M+ +KTFN E L SL D KPPISKAK+T IT++AI+AIKF
Sbjct: 83 MEAVKTFNSEDCASTPACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKF 142
Query: 40 YKHVVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHL 98
YKHVVQSVEKFI KCKPEYKVP LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+L
Sbjct: 143 YKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNL 202
Query: 99 YQCPPEDKSKIIRVLNLWQKNEVFTPDIIHPLFDMA 134
Y+CP +DKSKI+RVLNLWQKN VF +II PL DMA
Sbjct: 203 YRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMA 238
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 571 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 630
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 631 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 688
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 689 EGGMIDQETV 698
>gi|402867870|ref|XP_003898052.1| PREDICTED: protein SCAF8 isoform 2 [Papio anubis]
Length = 1337
Score = 200 bits (508), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/156 (64%), Positives = 117/156 (75%), Gaps = 22/156 (14%)
Query: 1 MDVIKTFNQE---------------------LSSLYDTKPPISKAKITAITRSAIRAIKF 39
M+ +KTFN E L SL D KPPISKAK+T IT++AI+AIKF
Sbjct: 46 MEAVKTFNSEDCASTPACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKF 105
Query: 40 YKHVVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHL 98
YKHVVQSVEKFI KCKPEYKVP LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+L
Sbjct: 106 YKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNL 165
Query: 99 YQCPPEDKSKIIRVLNLWQKNEVFTPDIIHPLFDMA 134
Y+CP +DKSKI+RVLNLWQKN VF +II PL DMA
Sbjct: 166 YRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMA 201
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 534 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 593
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 594 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 651
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 652 EGGMIDQETV 661
>gi|296199497|ref|XP_002747172.1| PREDICTED: protein SCAF8 isoform 2 [Callithrix jacchus]
Length = 1337
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/156 (64%), Positives = 117/156 (75%), Gaps = 22/156 (14%)
Query: 1 MDVIKTFNQE---------------------LSSLYDTKPPISKAKITAITRSAIRAIKF 39
M+ +KTFN E L SL D KPPISKAK+T IT++AI+AIKF
Sbjct: 46 MEAVKTFNSEDCASTPACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKF 105
Query: 40 YKHVVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHL 98
YKHVVQSVEKFI KCKPEYKVP LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+L
Sbjct: 106 YKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNL 165
Query: 99 YQCPPEDKSKIIRVLNLWQKNEVFTPDIIHPLFDMA 134
Y+CP +DKSKI+RVLNLWQKN VF +II PL DMA
Sbjct: 166 YRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMA 201
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 534 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 593
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 594 ALQKLSSGSYKIGSKIIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 651
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 652 EGGMIDQETV 661
>gi|395518631|ref|XP_003763463.1| PREDICTED: splicing factor, arginine/serine-rich 15, partial
[Sarcophilus harrisii]
Length = 1074
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 96/130 (73%), Positives = 111/130 (85%), Gaps = 1/130 (0%)
Query: 6 TFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYV 65
+++QEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP LYV
Sbjct: 1 SYHQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYV 60
Query: 66 IDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTP 124
IDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN VF
Sbjct: 61 IDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKI 120
Query: 125 DIIHPLFDMA 134
+II PL DMA
Sbjct: 121 EIIQPLLDMA 130
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 89/129 (68%), Gaps = 5/129 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA +AL KL
Sbjct: 471 SVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKL 530
Query: 215 K--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVF 272
N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E D + +GG+
Sbjct: 531 SRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-DLESFCEGGML 588
Query: 273 DEDTV-PLW 280
D +T+ P W
Sbjct: 589 DNETLNPDW 597
>gi|332212878|ref|XP_003255547.1| PREDICTED: protein SCAF8 isoform 2 [Nomascus leucogenys]
Length = 1337
Score = 199 bits (507), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 101/156 (64%), Positives = 117/156 (75%), Gaps = 22/156 (14%)
Query: 1 MDVIKTFNQE---------------------LSSLYDTKPPISKAKITAITRSAIRAIKF 39
M+ +KTFN E L SL D KPPISKAK+T IT++AI+AIKF
Sbjct: 46 MEAVKTFNSEDCASTPACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKF 105
Query: 40 YKHVVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHL 98
YKHVVQSVEKFI KCKPEYKVP LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+L
Sbjct: 106 YKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNL 165
Query: 99 YQCPPEDKSKIIRVLNLWQKNEVFTPDIIHPLFDMA 134
Y+CP +DKSKI+RVLNLWQKN VF +II PL DMA
Sbjct: 166 YRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMA 201
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 534 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 593
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 594 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 651
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 652 EGGMIDQETV 661
>gi|326671271|ref|XP_695887.4| PREDICTED: hypothetical protein LOC567501 [Danio rerio]
Length = 1137
Score = 199 bits (507), Expect = 1e-48, Method: Composition-based stats.
Identities = 94/134 (70%), Positives = 110/134 (82%), Gaps = 1/134 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FN EL SL DTKPPIS+AK+ +IT+SAI+AIK YKHVVQ VEKFI KCKPEYKV
Sbjct: 68 MDAVNAFNHELFSLMDTKPPISRAKMISITKSAIKAIKLYKHVVQIVEKFIKKCKPEYKV 127
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYV+DS+VRQSRHQF DKDVFGPRF +N+ TF++L CP ED+SKI+RVLNLWQKN
Sbjct: 128 PGLYVVDSIVRQSRHQFGADKDVFGPRFTKNITGTFENLCLCPTEDRSKIVRVLNLWQKN 187
Query: 120 EVFTPDIIHPLFDM 133
VF ++I PL DM
Sbjct: 188 GVFKIEVIQPLLDM 201
Score = 119 bits (299), Expect = 1e-24, Method: Composition-based stats.
Identities = 58/134 (43%), Positives = 89/134 (66%), Gaps = 5/134 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
+N ++CSTTLW+G L K Q+++++ E+G + SIN+IPPRGCA++ M RQDA +
Sbjct: 516 KNNTLSVCSTTLWVGQLDKRTQQQDVASILEEFGQIDSINMIPPRGCAYIVMIHRQDAYR 575
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL K+ K I +AWA KG+K ++K +W+V+ GV+Y+P+ ++ E D D
Sbjct: 576 ALQKLSRGPYKVNQKAIKIAWALNKGIK-AEFKQYWDVELGVTYVPWSKVKME-DLDVFR 633
Query: 268 DGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 634 EGGMLDSDTLAPEW 647
>gi|432111749|gb|ELK34794.1| Protein SCAF8, partial [Myotis davidii]
Length = 882
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/125 (76%), Positives = 109/125 (87%), Gaps = 1/125 (0%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
L SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP LYVIDS+V
Sbjct: 1 LYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIV 60
Query: 71 RQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHP 129
RQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF +II P
Sbjct: 61 RQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQP 120
Query: 130 LFDMA 134
L DMA
Sbjct: 121 LLDMA 125
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 458 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 517
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 518 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 575
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 576 EGGMIDQETV 585
>gi|449497518|ref|XP_002187166.2| PREDICTED: protein SCAF8 [Taeniopygia guttata]
Length = 1408
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/127 (74%), Positives = 110/127 (86%), Gaps = 1/127 (0%)
Query: 9 QELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDS 68
+ L SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP LYVIDS
Sbjct: 128 ERLYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDS 187
Query: 69 LVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDII 127
+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF +II
Sbjct: 188 IVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEII 247
Query: 128 HPLFDMA 134
PL DMA
Sbjct: 248 QPLLDMA 254
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 588 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAYR 647
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GVSYIP++++ K D +
Sbjct: 648 ALQKLSSGSYKIGSKIIKIAWALNKGVK-TEYKQFWDVDLGVSYIPWEKV-KLDDLEGFA 705
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 706 EGGMIDQETV 715
>gi|358413873|ref|XP_868935.4| PREDICTED: protein SCAF8-like isoform 3, partial [Bos taurus]
Length = 593
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/125 (76%), Positives = 109/125 (87%), Gaps = 1/125 (0%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
L SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP LYVIDS+V
Sbjct: 7 LYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIV 66
Query: 71 RQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHP 129
RQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF +II P
Sbjct: 67 RQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQP 126
Query: 130 LFDMA 134
L DMA
Sbjct: 127 LLDMA 131
Score = 124 bits (311), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 464 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 523
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 524 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 581
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 582 EGGMIDQETV 591
>gi|345324198|ref|XP_001511249.2| PREDICTED: protein SCAF8-like [Ornithorhynchus anatinus]
Length = 671
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/125 (76%), Positives = 109/125 (87%), Gaps = 1/125 (0%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
L SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP LYVIDS+V
Sbjct: 159 LYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIV 218
Query: 71 RQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHP 129
RQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF +II P
Sbjct: 219 RQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQP 278
Query: 130 LFDMA 134
L DMA
Sbjct: 279 LLDMA 283
>gi|281344647|gb|EFB20231.1| hypothetical protein PANDA_018307 [Ailuropoda melanoleuca]
Length = 1261
Score = 198 bits (503), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/126 (75%), Positives = 110/126 (87%), Gaps = 1/126 (0%)
Query: 10 ELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSL 69
+L SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP LYVIDS+
Sbjct: 1 QLYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSI 60
Query: 70 VRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIH 128
VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF +II
Sbjct: 61 VRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQ 120
Query: 129 PLFDMA 134
PL DMA
Sbjct: 121 PLLDMA 126
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 459 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 518
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 519 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 576
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 577 EGGMIDQETV 586
>gi|327262063|ref|XP_003215845.1| PREDICTED: t-lymphoma invasion and metastasis-inducing protein
2-like [Anolis carolinensis]
Length = 2850
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/125 (76%), Positives = 109/125 (87%), Gaps = 1/125 (0%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
L SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP LYVIDS+V
Sbjct: 14 LYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIV 73
Query: 71 RQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHP 129
RQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF +II P
Sbjct: 74 RQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNSVFKSEIIQP 133
Query: 130 LFDMA 134
L DMA
Sbjct: 134 LLDMA 138
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 471 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAYR 530
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GVSYIP++++ K D +
Sbjct: 531 ALQKLSSGSYKIGSKIIKIAWALNKGVK-TEYKQFWDVDLGVSYIPWEKV-KLDDLEGFA 588
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 589 EGGMIDQETV 598
>gi|344263838|ref|XP_003404002.1| PREDICTED: protein SCAF8 [Loxodonta africana]
Length = 1272
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/126 (75%), Positives = 110/126 (87%), Gaps = 1/126 (0%)
Query: 10 ELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSL 69
+L SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP LYVIDS+
Sbjct: 10 QLYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSI 69
Query: 70 VRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIH 128
VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF +II
Sbjct: 70 VRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQ 129
Query: 129 PLFDMA 134
PL DMA
Sbjct: 130 PLLDMA 135
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 467 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 526
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 527 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 584
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 585 EGGMIDQETV 594
>gi|348525442|ref|XP_003450231.1| PREDICTED: splicing factor, arginine/serine-rich 15-like
[Oreochromis niloticus]
Length = 665
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/136 (68%), Positives = 111/136 (81%), Gaps = 1/136 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FN EL S+ D KPPIS+AK+ ++T+SAI+AIK YKHVVQ VEKFI KCKPE KV
Sbjct: 1 MDAVNAFNMELFSMIDMKPPISRAKMMSVTKSAIKAIKLYKHVVQIVEKFIKKCKPELKV 60
Query: 61 PALYVIDSLVRQSRHQFQ-DKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYV+DS+VRQSRHQF DKDVFGPRF +N TFQ+LY+CP +DK+KI+RVLNLWQKN
Sbjct: 61 PGLYVVDSIVRQSRHQFGVDKDVFGPRFLKNFTETFQNLYRCPEDDKTKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMAD 135
VF DI+ PL DMA+
Sbjct: 121 GVFDMDILQPLMDMAN 136
Score = 112 bits (280), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 83/129 (64%), Gaps = 5/129 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+G L K Q+ ++ E+G + SIN+IPPRGCA++ M RQDA AL KL
Sbjct: 321 SVCSTTLWVGQLDKKTQQSDVMSLLEEFGQIESINMIPPRGCAYIVMVHRQDAYTALNKL 380
Query: 215 K--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVF 272
+ K+ K + +AWA KG+K K FW+V+ GV+YIP++++ E Y E GG+
Sbjct: 381 SRGSYKVNQKPVKIAWALNKGIKSAH-KKFWDVERGVTYIPWNKVKVEELQSYCE-GGML 438
Query: 273 DEDTV-PLW 280
D +T+ P W
Sbjct: 439 DAETLNPEW 447
>gi|345784697|ref|XP_533458.3| PREDICTED: protein SCAF8 [Canis lupus familiaris]
Length = 1267
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/125 (76%), Positives = 109/125 (87%), Gaps = 1/125 (0%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
L SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP LYVIDS+V
Sbjct: 7 LYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIV 66
Query: 71 RQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHP 129
RQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF +II P
Sbjct: 67 RQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQP 126
Query: 130 LFDMA 134
L DMA
Sbjct: 127 LLDMA 131
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 464 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 523
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 524 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 581
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 582 EGGMIDQETV 591
>gi|301785924|ref|XP_002928377.1| PREDICTED: putative RNA-binding protein 16-like [Ailuropoda
melanoleuca]
Length = 1315
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/125 (76%), Positives = 109/125 (87%), Gaps = 1/125 (0%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
L SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP LYVIDS+V
Sbjct: 56 LYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIV 115
Query: 71 RQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHP 129
RQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF +II P
Sbjct: 116 RQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQP 175
Query: 130 LFDMA 134
L DMA
Sbjct: 176 LLDMA 180
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 513 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 572
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 573 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 630
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 631 EGGMIDQETV 640
>gi|444732459|gb|ELW72751.1| Protein SCAF8 [Tupaia chinensis]
Length = 1022
Score = 197 bits (502), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/126 (75%), Positives = 110/126 (87%), Gaps = 1/126 (0%)
Query: 10 ELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSL 69
+L SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP LYVIDS+
Sbjct: 38 KLYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSI 97
Query: 70 VRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIH 128
VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF +II
Sbjct: 98 VRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQ 157
Query: 129 PLFDMA 134
PL DMA
Sbjct: 158 PLLDMA 163
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 79/115 (68%), Gaps = 4/115 (3%)
Query: 165 HLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT--KLQGK 222
+ K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +AL KL + K+ K
Sbjct: 399 QVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFRALQKLSSGSYKIGSK 458
Query: 223 TITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDEDTV 277
I +AWA KG+K ++K FW+V GV+YIP++++ K D + +GG+ D++TV
Sbjct: 459 VIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFAEGGMIDQETV 511
>gi|354466968|ref|XP_003495943.1| PREDICTED: protein SCAF8 [Cricetulus griseus]
Length = 1314
Score = 197 bits (502), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/125 (76%), Positives = 109/125 (87%), Gaps = 1/125 (0%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
L SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP LYVIDS+V
Sbjct: 56 LYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIV 115
Query: 71 RQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHP 129
RQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF +II P
Sbjct: 116 RQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQP 175
Query: 130 LFDMA 134
L DMA
Sbjct: 176 LLDMA 180
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQD+ +
Sbjct: 513 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDSFR 572
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D D
Sbjct: 573 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLDGFA 630
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 631 EGGMIDQETV 640
>gi|417413708|gb|JAA53168.1| Putative rna polymerase ii c-terminal domain-binding protein ra4,
partial [Desmodus rotundus]
Length = 1258
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/125 (76%), Positives = 109/125 (87%), Gaps = 1/125 (0%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
L SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP LYVIDS+V
Sbjct: 1 LYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIV 60
Query: 71 RQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHP 129
RQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF +II P
Sbjct: 61 RQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQP 120
Query: 130 LFDMA 134
L DMA
Sbjct: 121 LLDMA 125
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 458 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 517
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 518 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 575
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 576 EGGMIDQETV 585
>gi|338722920|ref|XP_001493696.3| PREDICTED: protein SCAF8 [Equus caballus]
Length = 1265
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/125 (76%), Positives = 109/125 (87%), Gaps = 1/125 (0%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
L SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP LYVIDS+V
Sbjct: 7 LYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIV 66
Query: 71 RQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHP 129
RQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF +II P
Sbjct: 67 RQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQP 126
Query: 130 LFDMA 134
L DMA
Sbjct: 127 LLDMA 131
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 464 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 523
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 524 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 581
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 582 EGGMIDQETV 591
>gi|148669694|gb|EDL01641.1| mCG121289, isoform CRA_b [Mus musculus]
Length = 1258
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/125 (76%), Positives = 109/125 (87%), Gaps = 1/125 (0%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
L SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP LYVIDS+V
Sbjct: 1 LYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIV 60
Query: 71 RQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHP 129
RQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF +II P
Sbjct: 61 RQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQP 120
Query: 130 LFDMA 134
L DMA
Sbjct: 121 LLDMA 125
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQD+ +
Sbjct: 458 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDSFR 517
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D D
Sbjct: 518 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLDGFA 575
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 576 EGGMIDQETV 585
>gi|426235228|ref|XP_004011590.1| PREDICTED: protein SCAF8 [Ovis aries]
Length = 1272
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/125 (76%), Positives = 109/125 (87%), Gaps = 1/125 (0%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
L SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP LYVIDS+V
Sbjct: 16 LYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIV 75
Query: 71 RQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHP 129
RQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF +II P
Sbjct: 76 RQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQP 135
Query: 130 LFDMA 134
L DMA
Sbjct: 136 LLDMA 140
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 473 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 532
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 533 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 590
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 591 EGGMIDQETV 600
>gi|395535190|ref|XP_003769614.1| PREDICTED: protein SCAF8 [Sarcophilus harrisii]
Length = 1409
Score = 197 bits (501), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 95/125 (76%), Positives = 109/125 (87%), Gaps = 1/125 (0%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
L SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP LYVIDS+V
Sbjct: 148 LYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIV 207
Query: 71 RQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHP 129
RQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF +II P
Sbjct: 208 RQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQP 267
Query: 130 LFDMA 134
L DMA
Sbjct: 268 LLDMA 272
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQD+ +
Sbjct: 606 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDSYR 665
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D D
Sbjct: 666 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLDGFA 723
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 724 EGGMIDQETV 733
>gi|74222731|dbj|BAE42232.1| unnamed protein product [Mus musculus]
Length = 705
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 95/125 (76%), Positives = 109/125 (87%), Gaps = 1/125 (0%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
L SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP LYVIDS+V
Sbjct: 85 LYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIV 144
Query: 71 RQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHP 129
RQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF +II P
Sbjct: 145 RQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQP 204
Query: 130 LFDMA 134
L DMA
Sbjct: 205 LLDMA 209
Score = 124 bits (310), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQD+ +
Sbjct: 542 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDSFR 601
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D D
Sbjct: 602 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLDGFA 659
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 660 EGGMIDQETV 669
>gi|410960294|ref|XP_003986728.1| PREDICTED: protein SCAF8 [Felis catus]
Length = 1290
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 95/125 (76%), Positives = 109/125 (87%), Gaps = 1/125 (0%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
L SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP LYVIDS+V
Sbjct: 52 LYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIV 111
Query: 71 RQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHP 129
RQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF +II P
Sbjct: 112 RQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQP 171
Query: 130 LFDMA 134
L DMA
Sbjct: 172 LLDMA 176
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 509 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 568
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 569 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 626
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 627 EGGMIDQETV 636
>gi|348563058|ref|XP_003467325.1| PREDICTED: splicing factor, arginine/serine-rich 15-like [Cavia
porcellus]
Length = 1245
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/131 (73%), Positives = 110/131 (83%), Gaps = 1/131 (0%)
Query: 5 KTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALY 64
K F+ +L SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP LY
Sbjct: 92 KLFSFKLFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLY 151
Query: 65 VIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFT 123
VIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN VF
Sbjct: 152 VIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFK 211
Query: 124 PDIIHPLFDMA 134
+II PL DMA
Sbjct: 212 IEIIQPLLDMA 222
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 89/129 (68%), Gaps = 5/129 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA +AL KL
Sbjct: 597 SVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKL 656
Query: 215 K--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVF 272
N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + + +GG+
Sbjct: 657 SRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELESFCEGGML 714
Query: 273 DEDTV-PLW 280
D DT+ P W
Sbjct: 715 DSDTLNPDW 723
>gi|281342146|gb|EFB17730.1| hypothetical protein PANDA_018772 [Ailuropoda melanoleuca]
Length = 644
Score = 196 bits (497), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/126 (75%), Positives = 107/126 (84%), Gaps = 1/126 (0%)
Query: 10 ELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSL 69
EL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP LYVIDS+
Sbjct: 103 ELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSI 162
Query: 70 VRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIH 128
VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN VF +II
Sbjct: 163 VRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQ 222
Query: 129 PLFDMA 134
PL DMA
Sbjct: 223 PLLDMA 228
>gi|351704697|gb|EHB07616.1| Splicing factor, arginine/serine-rich 15, partial [Heterocephalus
glaber]
Length = 1146
Score = 195 bits (496), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 95/130 (73%), Positives = 110/130 (84%), Gaps = 1/130 (0%)
Query: 6 TFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYV 65
+F+ +L SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP LYV
Sbjct: 1 SFSFKLFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYV 60
Query: 66 IDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTP 124
IDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN VF
Sbjct: 61 IDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKI 120
Query: 125 DIIHPLFDMA 134
+II PL DMA
Sbjct: 121 EIIQPLLDMA 130
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 89/129 (68%), Gaps = 5/129 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA +AL KL
Sbjct: 510 SVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKL 569
Query: 215 K--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVF 272
N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + + +GG+
Sbjct: 570 SRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELESFCEGGML 627
Query: 273 DEDTV-PLW 280
D DT+ P W
Sbjct: 628 DSDTLNPDW 636
>gi|432896630|ref|XP_004076355.1| PREDICTED: uncharacterized protein LOC101172836 [Oryzias latipes]
Length = 1159
Score = 195 bits (495), Expect = 2e-47, Method: Composition-based stats.
Identities = 92/134 (68%), Positives = 110/134 (82%), Gaps = 1/134 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D+KPPIS+AK+ +IT+SAI+A+K YKHVVQ VEKFI KCKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDSKPPISRAKMISITKSAIKAMKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
LYV+DS+VRQSRHQF DKDVFGPRF +N+ TF++L CP ED+SKI+RVLNLWQKN
Sbjct: 61 AGLYVVDSIVRQSRHQFGPDKDVFGPRFTKNITGTFENLCLCPIEDRSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDM 133
VF ++I PL DM
Sbjct: 121 GVFKIEVIQPLLDM 134
Score = 114 bits (286), Expect = 3e-23, Method: Composition-based stats.
Identities = 57/135 (42%), Positives = 92/135 (68%), Gaps = 5/135 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
+N ++CSTTLW+G L K Q+++++ E+G + SIN+IPPRGCA++ M RQDA +
Sbjct: 455 KNEAVSICSTTLWVGQLDKRTQQQDVASLLEEFGQIESINMIPPRGCAYIVMMHRQDAFR 514
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL K+ KTI +AWA KG+K ++K +W+V+ GV+ IP+ ++ +E + L+
Sbjct: 515 ALQKLSRGPYKVNQKTIKIAWALNKGIK-PEFKQYWDVELGVTCIPWSKV-REDQLEELK 572
Query: 268 DGGVFDEDTV-PLWL 281
+GG+ D +T+ P W+
Sbjct: 573 EGGMLDSETLSPEWV 587
>gi|37361886|gb|AAQ91056.1| LRRGT00100 [Rattus norvegicus]
Length = 919
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/125 (75%), Positives = 106/125 (84%), Gaps = 1/125 (0%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
L SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP LYVIDS+V
Sbjct: 49 LFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIV 108
Query: 71 RQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHP 129
RQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN VF +II P
Sbjct: 109 RQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQP 168
Query: 130 LFDMA 134
L DMA
Sbjct: 169 LLDMA 173
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 89/129 (68%), Gaps = 5/129 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA +AL KL
Sbjct: 553 SVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKL 612
Query: 215 K--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVF 272
N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + + +GG+
Sbjct: 613 SRGNYKVNQKSIKIAWALNKGIK-ADFKQYWDVELGVTYIPWDKVKAE-ELESFCEGGML 670
Query: 273 DEDTV-PLW 280
D DT+ P W
Sbjct: 671 DSDTLNPDW 679
>gi|410970098|ref|XP_003991526.1| PREDICTED: splicing factor, arginine/serine-rich 15 [Felis catus]
Length = 1321
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 94/126 (74%), Positives = 107/126 (84%), Gaps = 1/126 (0%)
Query: 10 ELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSL 69
+L SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP LYVIDS+
Sbjct: 189 QLFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSI 248
Query: 70 VRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIH 128
VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN VF +II
Sbjct: 249 VRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQ 308
Query: 129 PLFDMA 134
PL DMA
Sbjct: 309 PLLDMA 314
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 89/129 (68%), Gaps = 5/129 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA +AL KL
Sbjct: 686 SVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKL 745
Query: 215 K--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVF 272
N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + + +GG+
Sbjct: 746 SRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELESFCEGGML 803
Query: 273 DEDTV-PLW 280
D DT+ P W
Sbjct: 804 DSDTLNPDW 812
>gi|348518826|ref|XP_003446932.1| PREDICTED: hypothetical protein LOC100698488 [Oreochromis
niloticus]
Length = 1151
Score = 194 bits (493), Expect = 4e-47, Method: Composition-based stats.
Identities = 92/135 (68%), Positives = 110/135 (81%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FN EL SL D+KPPIS+AK+ +IT+SAI+A+K YKHVVQ VEKFI KCKPEYKV
Sbjct: 1 MDAVNAFNHELFSLMDSKPPISRAKMISITKSAIKAMKLYKHVVQIVEKFIKKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
LYV+DS+VRQSRHQF DKDVFGPRF +N+ TF++L CP ED+SKI+RVLNLWQKN
Sbjct: 61 AGLYVVDSIVRQSRHQFGPDKDVFGPRFTKNITGTFENLCLCPVEDRSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF ++I PL DMA
Sbjct: 121 GVFKIEVIQPLLDMA 135
Score = 115 bits (288), Expect = 2e-23, Method: Composition-based stats.
Identities = 57/129 (44%), Positives = 89/129 (68%), Gaps = 5/129 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+G L K Q+++++ E+G + SIN+IPPRGCA++ M RQDA +AL KL
Sbjct: 465 SICSTTLWVGQLDKRTQQQDVACLLEEFGQIESINMIPPRGCAYIVMIHRQDAFRALQKL 524
Query: 215 KNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVF 272
K+ K I +AWA KG+K D+K +W+V+ GV+Y+P+ ++ +E + L++GG+
Sbjct: 525 SRGTFKVNQKAIKIAWALNKGIK-ADYKQYWDVELGVTYVPWSKV-REDQLEELKEGGML 582
Query: 273 DEDTV-PLW 280
D DT+ P W
Sbjct: 583 DVDTLSPEW 591
>gi|345795260|ref|XP_003434012.1| PREDICTED: splicing factor, arginine/serine-rich 15 [Canis lupus
familiaris]
Length = 1127
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 94/126 (74%), Positives = 107/126 (84%), Gaps = 1/126 (0%)
Query: 10 ELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSL 69
+L SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP LYVIDS+
Sbjct: 2 QLFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSI 61
Query: 70 VRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIH 128
VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN VF +II
Sbjct: 62 VRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQ 121
Query: 129 PLFDMA 134
PL DMA
Sbjct: 122 PLLDMA 127
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 89/129 (68%), Gaps = 5/129 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA +AL KL
Sbjct: 492 SVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKL 551
Query: 215 K--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVF 272
N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + + +GG+
Sbjct: 552 SRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELESFCEGGML 609
Query: 273 DEDTV-PLW 280
D DT+ P W
Sbjct: 610 DSDTLNPDW 618
>gi|334329443|ref|XP_001376116.2| PREDICTED: splicing factor, arginine/serine-rich 15 [Monodelphis
domestica]
Length = 1081
Score = 194 bits (493), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 94/125 (75%), Positives = 106/125 (84%), Gaps = 1/125 (0%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
L SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP LYVIDS+V
Sbjct: 11 LFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIV 70
Query: 71 RQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHP 129
RQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN VF +II P
Sbjct: 71 RQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQP 130
Query: 130 LFDMA 134
L DMA
Sbjct: 131 LLDMA 135
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 89/129 (68%), Gaps = 5/129 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA +AL KL
Sbjct: 476 SVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKL 535
Query: 215 K--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVF 272
N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E D + +GG+
Sbjct: 536 SRGNYKVNQKSIKIAWALNKGIK-TDYKQYWDVELGVTYIPWDKVKPE-DLESFCEGGML 593
Query: 273 DEDTV-PLW 280
D +T+ P W
Sbjct: 594 DSETLNPDW 602
>gi|149059800|gb|EDM10683.1| splicing factor, arginine/serine-rich 15, isoform CRA_a [Rattus
norvegicus]
Length = 464
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 94/125 (75%), Positives = 106/125 (84%), Gaps = 1/125 (0%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
L SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP LYVIDS+V
Sbjct: 96 LFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIV 155
Query: 71 RQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHP 129
RQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN VF +II P
Sbjct: 156 RQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQP 215
Query: 130 LFDMA 134
L DMA
Sbjct: 216 LLDMA 220
>gi|291401009|ref|XP_002716737.1| PREDICTED: splicing factor, arginine/serine-rich 15 [Oryctolagus
cuniculus]
Length = 1151
Score = 194 bits (492), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 94/127 (74%), Positives = 108/127 (85%), Gaps = 1/127 (0%)
Query: 9 QELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDS 68
++L SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP LYVIDS
Sbjct: 6 KKLFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDS 65
Query: 69 LVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDII 127
+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN VF +II
Sbjct: 66 IVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEII 125
Query: 128 HPLFDMA 134
PL DMA
Sbjct: 126 QPLLDMA 132
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 95/143 (66%), Gaps = 7/143 (4%)
Query: 141 HRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVC 200
+ L +I+A ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++
Sbjct: 491 QKGLPQIKAETA--SVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIV 548
Query: 201 MNRRQDAAKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLS 258
M RQDA +AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++
Sbjct: 549 MVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVK 607
Query: 259 KEIDYDYLEDGGVFDEDTV-PLW 280
E + + +GG+ D DT+ P W
Sbjct: 608 PE-ELEGFCEGGMLDNDTLNPDW 629
>gi|354466322|ref|XP_003495623.1| PREDICTED: splicing factor, arginine/serine-rich 15-like
[Cricetulus griseus]
Length = 1204
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/125 (75%), Positives = 106/125 (84%), Gaps = 1/125 (0%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
L SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP LYVIDS+V
Sbjct: 86 LFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIV 145
Query: 71 RQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHP 129
RQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN VF +II P
Sbjct: 146 RQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQP 205
Query: 130 LFDMA 134
L DMA
Sbjct: 206 LLDMA 210
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/136 (42%), Positives = 92/136 (67%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q ++ ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 578 QIKSETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 637
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+Y+P+D++ E + +
Sbjct: 638 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYVPWDKVKPE-ELES 695
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 696 FCEGGMLDGDTLNPEW 711
>gi|432119055|gb|ELK38280.1| Splicing factor, arginine/serine-rich 15 [Myotis davidii]
Length = 856
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/125 (75%), Positives = 106/125 (84%), Gaps = 1/125 (0%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
L SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP LYVIDS+V
Sbjct: 20 LFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIV 79
Query: 71 RQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHP 129
RQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN VF +II P
Sbjct: 80 RQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQP 139
Query: 130 LFDMA 134
L DMA
Sbjct: 140 LLDMA 144
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 57/134 (42%), Positives = 91/134 (67%), Gaps = 5/134 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
++ ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA +
Sbjct: 497 KSETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYR 556
Query: 210 ALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+Y+P+D++ E + +
Sbjct: 557 ALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYVPWDKVKPE-ELEGFC 614
Query: 268 DGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 615 EGGMLDSDTLNPEW 628
>gi|148665970|gb|EDK98386.1| mCG129573, isoform CRA_a [Mus musculus]
Length = 836
Score = 193 bits (491), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 94/125 (75%), Positives = 106/125 (84%), Gaps = 1/125 (0%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
L SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP LYVIDS+V
Sbjct: 151 LFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIV 210
Query: 71 RQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHP 129
RQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN VF +II P
Sbjct: 211 RQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQP 270
Query: 130 LFDMA 134
L DMA
Sbjct: 271 LLDMA 275
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 5/89 (5%)
Query: 195 GCAFVCMNRRQDAAKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYI 252
GCA++ M RQDA +AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YI
Sbjct: 520 GCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYI 578
Query: 253 PYDRLSKEIDYDYLEDGGVFDEDTV-PLW 280
P+D++ E + + +GG+ D DT+ P W
Sbjct: 579 PWDKVKAE-ELESFCEGGMLDSDTLNPDW 606
>gi|426219151|ref|XP_004003792.1| PREDICTED: splicing factor, arginine/serine-rich 15 [Ovis aries]
Length = 1164
Score = 193 bits (491), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 94/125 (75%), Positives = 106/125 (84%), Gaps = 1/125 (0%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
L SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP LYVIDS+V
Sbjct: 30 LFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIV 89
Query: 71 RQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHP 129
RQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN VF +II P
Sbjct: 90 RQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQP 149
Query: 130 LFDMA 134
L DMA
Sbjct: 150 LLDMA 154
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 61/143 (42%), Positives = 95/143 (66%), Gaps = 7/143 (4%)
Query: 141 HRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVC 200
+ L +I+A ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++
Sbjct: 515 QKGLPQIKAETA--SVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIV 572
Query: 201 MNRRQDAAKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLS 258
M RQDA +AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++
Sbjct: 573 MVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVK 631
Query: 259 KEIDYDYLEDGGVFDEDTV-PLW 280
E + + +GG+ D DT+ P W
Sbjct: 632 PE-ELESFCEGGMLDSDTLNPDW 653
>gi|195346331|ref|XP_002039719.1| GM15745 [Drosophila sechellia]
gi|194135068|gb|EDW56584.1| GM15745 [Drosophila sechellia]
Length = 1161
Score = 193 bits (491), Expect = 7e-47, Method: Composition-based stats.
Identities = 84/128 (65%), Positives = 111/128 (86%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+GHLSKLV +EELSDTFGEYGD+VSI+ I PRGCAF+ MNRRQDA KA+ L
Sbjct: 348 SVCSTTLWVGHLSKLVYQEELSDTFGEYGDIVSIDQIVPRGCAFIVMNRRQDAHKAMQAL 407
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDE 274
KN KLQG+ IT++WA GKG+K K+WKD+W+++ GV+YIP+ +LS + D+D LE+GG+FDE
Sbjct: 408 KNHKLQGRAITISWAAGKGVKSKEWKDYWDLELGVTYIPWSKLSSDTDFDALEEGGMFDE 467
Query: 275 DTVPLWLK 282
DT+P+ +K
Sbjct: 468 DTMPIQMK 475
>gi|326913250|ref|XP_003202952.1| PREDICTED: splicing factor, arginine/serine-rich 15-like isoform 1
[Meleagris gallopavo]
Length = 1094
Score = 193 bits (490), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 93/126 (73%), Positives = 107/126 (84%), Gaps = 1/126 (0%)
Query: 10 ELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSL 69
+L SL + KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP LYVIDS+
Sbjct: 12 QLFSLMEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSI 71
Query: 70 VRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIH 128
VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN VF +II
Sbjct: 72 VRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQ 131
Query: 129 PLFDMA 134
PL DMA
Sbjct: 132 PLLDMA 137
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q ++ ++CSTTLW+G L K ++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 487 QIKSETVSVCSTTLWVGQLDKRTTQQDVGSLLEEFGPIESINMIPPRGCAYIVMVHRQDA 546
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E D +
Sbjct: 547 YRALQKLSRGNFKVNQKSIKIAWALNKGIK-PDYKQYWDVELGVTYIPWDKVKPE-DLES 604
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D +T+ P W
Sbjct: 605 FCEGGMLDNETLSPEW 620
>gi|344276829|ref|XP_003410208.1| PREDICTED: splicing factor, arginine/serine-rich 15-like [Loxodonta
africana]
Length = 1453
Score = 192 bits (489), Expect = 9e-47, Method: Composition-based stats.
Identities = 94/125 (75%), Positives = 106/125 (84%), Gaps = 1/125 (0%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
L SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP LYVIDS+V
Sbjct: 327 LFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIV 386
Query: 71 RQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHP 129
RQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN VF +II P
Sbjct: 387 RQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQP 446
Query: 130 LFDMA 134
L DMA
Sbjct: 447 LLDMA 451
Score = 118 bits (295), Expect = 4e-24, Method: Composition-based stats.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 813 QIKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 872
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 873 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELES 930
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 931 FCEGGMLDSDTLNPDW 946
>gi|326913254|ref|XP_003202954.1| PREDICTED: splicing factor, arginine/serine-rich 15-like isoform 3
[Meleagris gallopavo]
Length = 1056
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/126 (73%), Positives = 107/126 (84%), Gaps = 1/126 (0%)
Query: 10 ELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSL 69
+L SL + KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP LYVIDS+
Sbjct: 12 QLFSLMEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSI 71
Query: 70 VRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIH 128
VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN VF +II
Sbjct: 72 VRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQ 131
Query: 129 PLFDMA 134
PL DMA
Sbjct: 132 PLLDMA 137
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 88/129 (68%), Gaps = 5/129 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+G L K ++++ E+G + SIN+IPPRGCA++ M RQDA +AL KL
Sbjct: 478 SVCSTTLWVGQLDKRTTQQDVGSLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKL 537
Query: 215 K--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVF 272
N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E D + +GG+
Sbjct: 538 SRGNFKVNQKSIKIAWALNKGIK-PDYKQYWDVELGVTYIPWDKVKPE-DLESFCEGGML 595
Query: 273 DEDTV-PLW 280
D +T+ P W
Sbjct: 596 DNETLSPEW 604
>gi|449485730|ref|XP_002188657.2| PREDICTED: splicing factor, arginine/serine-rich 15 [Taeniopygia
guttata]
Length = 1081
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/125 (74%), Positives = 106/125 (84%), Gaps = 1/125 (0%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
L SL + KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP LYVIDS+V
Sbjct: 4 LFSLMEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIV 63
Query: 71 RQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHP 129
RQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN VF +II P
Sbjct: 64 RQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQP 123
Query: 130 LFDMA 134
L DMA
Sbjct: 124 LLDMA 128
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 88/129 (68%), Gaps = 5/129 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+G L K ++++ E+G + SIN+IPPRGCA++ M RQDA +AL KL
Sbjct: 485 SVCSTTLWVGQLDKRTTQQDVGSLLEEFGPIESINMIPPRGCAYIVMVHRQDANRALQKL 544
Query: 215 K--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVF 272
N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E D + +GG+
Sbjct: 545 SRGNFKVNQKSIKIAWALNKGIK-PDYKQYWDVELGVTYIPWDKVKPE-DLESFCEGGML 602
Query: 273 DEDTV-PLW 280
D +T+ P W
Sbjct: 603 DNETLSPEW 611
>gi|395737892|ref|XP_003776999.1| PREDICTED: LOW QUALITY PROTEIN: T-lymphoma invasion and
metastasis-inducing protein 2 [Pongo abelii]
Length = 3061
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 93/139 (66%), Positives = 113/139 (81%), Gaps = 5/139 (3%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFI----IKCKP 56
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIK KH++QS + F+ KCKP
Sbjct: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKVRKHILQSTQLFVKVCFQKCKP 60
Query: 57 EYKVPALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNL 115
EYKVP LYVIDS+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNL
Sbjct: 61 EYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNL 120
Query: 116 WQKNEVFTPDIIHPLFDMA 134
WQKN VF +II PL DMA
Sbjct: 121 WQKNNVFKSEIIQPLLDMA 139
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 472 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 531
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 532 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 589
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 590 EGGMIDQETV 599
>gi|449283823|gb|EMC90417.1| Splicing factor, arginine/serine-rich 15, partial [Columba livia]
Length = 1082
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 93/125 (74%), Positives = 106/125 (84%), Gaps = 1/125 (0%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
L SL + KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP LYVIDS+V
Sbjct: 1 LFSLMEMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIV 60
Query: 71 RQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHP 129
RQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN VF +II P
Sbjct: 61 RQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQP 120
Query: 130 LFDMA 134
L DMA
Sbjct: 121 LLDMA 125
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q ++ ++CSTTLW+G L K ++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 475 QIKSETVSVCSTTLWVGQLDKRTTQQDVGSLLEEFGPIESINMIPPRGCAYIVMVHRQDA 534
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E D +
Sbjct: 535 YRALQKLSRGNFKVNQKSIKIAWALNKGIK-PDYKQYWDVELGVTYIPWDKVKPE-DLES 592
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D +T+ P W
Sbjct: 593 FCEGGMLDNETLCPEW 608
>gi|410910416|ref|XP_003968686.1| PREDICTED: splicing factor, arginine/serine-rich 15-like [Takifugu
rubripes]
Length = 627
Score = 191 bits (486), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/138 (66%), Positives = 109/138 (78%), Gaps = 1/138 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FN EL S+ D KPPIS+AK+ ++T++AI+AIK YKHVVQ VEKFI KCKPE KV
Sbjct: 1 MDAVNAFNMELFSMIDMKPPISRAKMMSVTKAAIKAIKLYKHVVQIVEKFIKKCKPELKV 60
Query: 61 PALYVIDSLVRQSRHQFQ-DKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF +N TFQ+LY C EDK+KI+RVLNLWQKN
Sbjct: 61 PGLYVIDSIVRQSRHQFGVDKDVFGPRFLKNFTETFQNLYHCQGEDKTKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPN 137
VF +I+ L DMA+ N
Sbjct: 121 GVFDTNILQSLVDMANGN 138
Score = 114 bits (285), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 57/129 (44%), Positives = 82/129 (63%), Gaps = 5/129 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLWIG L K Q+ ++ E+G + SIN+IPPRGCA++ M RQDA AL KL
Sbjct: 312 SVCSTTLWIGQLDKKTQQSDVVSLLEEFGQIESINMIPPRGCAYIVMVHRQDAYTALNKL 371
Query: 215 K--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVF 272
+ ++ K + +AWA KG+K K FW+V+ GV+YIP+ ++ E D + +GG
Sbjct: 372 SRGSYRVNQKPVKIAWALNKGIKSTH-KKFWDVEQGVTYIPWSKVRVE-DLESYREGGTL 429
Query: 273 DEDTV-PLW 280
D DT+ P W
Sbjct: 430 DADTLDPAW 438
>gi|40807193|gb|AAH65329.1| Si:ch211-245g11.2 protein [Danio rerio]
Length = 745
Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 84/135 (62%), Positives = 109/135 (80%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ + FN E+SS+ D PPIS+AK+ ++T++ I+AI+ YKHVVQ VEKFI +CKP+ KV
Sbjct: 1 MEAVNAFNGEMSSMMDMTPPISRAKMMSVTKAGIKAIRLYKHVVQIVEKFIKRCKPDLKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYV+DS++RQSRHQF DKD+FGPRF +N TFQ+L++CP +DK KI+RVLNLWQKN
Sbjct: 61 PGLYVVDSIIRQSRHQFGADKDLFGPRFLKNFTVTFQNLFECPEDDKGKILRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
EVF +II PL DMA
Sbjct: 121 EVFGLEIIQPLVDMA 135
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 92/139 (66%), Gaps = 5/139 (3%)
Query: 145 AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRR 204
AE + ++C+TTLWIG L K Q ++++ E+G + SIN+IPPRGCA+V M R
Sbjct: 484 AEPSVKKETLSVCTTTLWIGQLDKKTQRQDITSLMEEFGQIESINMIPPRGCAYVAMVHR 543
Query: 205 QDAAKALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEID 262
QDA AL KL T K+ KTI +AWA KG+K ++K FW+V+ G+++IP+ ++ K D
Sbjct: 544 QDAQTALNKLSKTSVKVNQKTIKIAWAMNKGIKS-EYKKFWDVERGITFIPWGKV-KPND 601
Query: 263 YDYLEDGGVFDEDTV-PLW 280
L++GG+FD +T+ P W
Sbjct: 602 IQSLQEGGLFDPETLKPEW 620
>gi|431915257|gb|ELK15944.1| Splicing factor, arginine/serine-rich 15 [Pteropus alecto]
Length = 1113
Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 91/120 (75%), Positives = 103/120 (85%), Gaps = 1/120 (0%)
Query: 16 DTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRH 75
D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP LYVIDS+VRQSRH
Sbjct: 2 DMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRH 61
Query: 76 QF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHPLFDMA 134
QF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN VF +II PL DMA
Sbjct: 62 QFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMA 121
Score = 120 bits (301), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 89/129 (68%), Gaps = 5/129 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA +AL KL
Sbjct: 487 SVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKL 546
Query: 215 K--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVF 272
N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + + +GG+
Sbjct: 547 SRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELESFCEGGML 604
Query: 273 DEDTV-PLW 280
D DT+ P W
Sbjct: 605 DSDTLNPEW 613
>gi|159155000|gb|AAI54507.1| Si:ch211-245g11.2 protein [Danio rerio]
Length = 737
Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 84/135 (62%), Positives = 109/135 (80%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ + FN E+SS+ D PPIS+AK+ ++T++ I+AI+ YKHVVQ VEKFI +CKP+ KV
Sbjct: 3 MEAVNAFNGEMSSMMDMTPPISRAKMMSVTKAGIKAIRLYKHVVQIVEKFIKRCKPDLKV 62
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYV+DS++RQSRHQF DKD+FGPRF +N TFQ+L++CP +DK KI+RVLNLWQKN
Sbjct: 63 PGLYVVDSIIRQSRHQFGADKDLFGPRFLKNFTVTFQNLFECPEDDKGKILRVLNLWQKN 122
Query: 120 EVFTPDIIHPLFDMA 134
EVF +II PL DMA
Sbjct: 123 EVFGLEIIQPLVDMA 137
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 92/139 (66%), Gaps = 5/139 (3%)
Query: 145 AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRR 204
AE + ++C+TTLWIG L K Q ++++ E+G + SIN+IPPRGCA+V M R
Sbjct: 492 AEPSVKKETLSVCTTTLWIGQLDKKTQRQDITSLMEEFGQIESINMIPPRGCAYVAMVHR 551
Query: 205 QDAAKALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEID 262
QDA AL KL T K+ KTI +AWA KG+K ++K FW+V+ G+++IP+ ++ K D
Sbjct: 552 QDAQTALNKLSKTSVKVNQKTIKIAWAMNKGIKS-EYKKFWDVERGITFIPWGKV-KPND 609
Query: 263 YDYLEDGGVFDEDTV-PLW 280
L++GG+FD +T+ P W
Sbjct: 610 IQSLQEGGLFDPETLKPEW 628
>gi|338720763|ref|XP_003364244.1| PREDICTED: splicing factor, arginine/serine-rich 15 [Equus
caballus]
Length = 1127
Score = 190 bits (482), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 91/120 (75%), Positives = 103/120 (85%), Gaps = 1/120 (0%)
Query: 16 DTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRH 75
D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP LYVIDS+VRQSRH
Sbjct: 2 DMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRH 61
Query: 76 QF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHPLFDMA 134
QF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN VF +II PL DMA
Sbjct: 62 QFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMA 121
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 89/129 (68%), Gaps = 5/129 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA +AL KL
Sbjct: 487 SVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKL 546
Query: 215 K--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVF 272
N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + + +GG+
Sbjct: 547 SRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELESFCEGGML 604
Query: 273 DEDTV-PLW 280
D DT+ P W
Sbjct: 605 DSDTLNPDW 613
>gi|89130700|gb|AAI14249.1| Si:ch211-245g11.2 protein [Danio rerio]
Length = 734
Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 84/135 (62%), Positives = 109/135 (80%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ + FN E+SS+ D PPIS+AK+ ++T++ I+AI+ YKHVVQ VEKFI +CKP+ KV
Sbjct: 1 MEAVNAFNGEMSSMMDMTPPISRAKMMSVTKAGIKAIRLYKHVVQIVEKFIKRCKPDLKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYV+DS++RQSRHQF DKD+FGPRF +N TFQ+L++CP +DK KI+RVLNLWQKN
Sbjct: 61 PGLYVVDSIIRQSRHQFGADKDLFGPRFLKNFTVTFQNLFECPEDDKGKILRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
EVF +II PL DMA
Sbjct: 121 EVFGLEIIQPLVDMA 135
Score = 125 bits (314), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 92/139 (66%), Gaps = 5/139 (3%)
Query: 145 AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRR 204
AE + ++C+TTLWIG L K Q ++++ E+G + SIN+IPPRGCA+V M R
Sbjct: 490 AEPSVKKETLSVCTTTLWIGQLDKKTQRQDITSLMEEFGQIESINMIPPRGCAYVAMVHR 549
Query: 205 QDAAKALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEID 262
QDA AL KL T K+ KTI +AWA KG+K ++K FW+V+ G+++IP+ ++ K D
Sbjct: 550 QDAQTALNKLSKTSVKVNQKTIKIAWAMNKGIKS-EYKKFWDVERGITFIPWGKV-KPND 607
Query: 263 YDYLEDGGVFDEDTV-PLW 280
L++GG+FD +T+ P W
Sbjct: 608 IQSLQEGGLFDPETLKPEW 626
>gi|338720765|ref|XP_003364245.1| PREDICTED: splicing factor, arginine/serine-rich 15 [Equus
caballus]
Length = 1105
Score = 189 bits (481), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 91/120 (75%), Positives = 103/120 (85%), Gaps = 1/120 (0%)
Query: 16 DTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRH 75
D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP LYVIDS+VRQSRH
Sbjct: 2 DMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIVRQSRH 61
Query: 76 QF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHPLFDMA 134
QF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN VF +II PL DMA
Sbjct: 62 QFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMA 121
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 89/129 (68%), Gaps = 5/129 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA +AL KL
Sbjct: 487 SVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKL 546
Query: 215 K--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVF 272
N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + + +GG+
Sbjct: 547 SRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELESFCEGGML 604
Query: 273 DEDTV-PLW 280
D DT+ P W
Sbjct: 605 DSDTLNPDW 613
>gi|410915842|ref|XP_003971396.1| PREDICTED: uncharacterized protein LOC101079009 [Takifugu rubripes]
Length = 1107
Score = 189 bits (481), Expect = 9e-46, Method: Composition-based stats.
Identities = 90/134 (67%), Positives = 109/134 (81%), Gaps = 1/134 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ + FN EL SL D+KPPIS+AK+ +IT+SAI+A+K YKHVVQ VEKFI KCKPEYKV
Sbjct: 1 MEAVNAFNFELFSLMDSKPPISRAKMISITKSAIKAMKLYKHVVQIVEKFIRKCKPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
LYV+DS+VRQSRHQF DKDVFGPRF +N+ TF++L CP ED+SKI+RVLNLWQKN
Sbjct: 61 AGLYVVDSIVRQSRHQFGADKDVFGPRFTKNITETFENLCLCPVEDRSKIVRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDM 133
VF ++I PL DM
Sbjct: 121 GVFKIEVIQPLLDM 134
Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats.
Identities = 57/129 (44%), Positives = 90/129 (69%), Gaps = 5/129 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+G L K Q+++++ E+G + SIN+IPPRGCA++ M RQDA +AL KL
Sbjct: 397 SICSTTLWVGQLDKRTQQQDVACLLEEFGQIESINMIPPRGCAYIVMTHRQDAYRALQKL 456
Query: 215 K--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVF 272
+ K+ K I +AWA KG+K + K FW+V+ GV+Y+P+ ++ +E+ + L++GGV
Sbjct: 457 SRGSYKVNQKAIKIAWALNKGIK-SELKQFWDVELGVTYVPWSKI-REVQLEELKEGGVL 514
Query: 273 DEDTV-PLW 280
D +T+ P W
Sbjct: 515 DVETLAPEW 523
>gi|189529154|ref|XP_685725.2| PREDICTED: hypothetical protein LOC552961 [Danio rerio]
Length = 773
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 84/135 (62%), Positives = 109/135 (80%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ + FN E+SS+ D PPIS+AK+ ++T++ I+AI+ YKHVVQ VEKFI +CKP+ KV
Sbjct: 3 MEAVNAFNGEMSSMMDMTPPISRAKMMSVTKAGIKAIRLYKHVVQIVEKFIKRCKPDLKV 62
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYV+DS++RQSRHQF DKD+FGPRF +N TFQ+L++CP +DK KI+RVLNLWQKN
Sbjct: 63 PGLYVVDSIIRQSRHQFGADKDLFGPRFLKNFTVTFQNLFECPEDDKGKILRVLNLWQKN 122
Query: 120 EVFTPDIIHPLFDMA 134
EVF +II PL DMA
Sbjct: 123 EVFGLEIIQPLVDMA 137
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 92/139 (66%), Gaps = 5/139 (3%)
Query: 145 AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRR 204
AE + ++C+TTLWIG L K Q ++++ E+G + SIN+IPPRGCA+V M R
Sbjct: 492 AEPSVKKETLSVCTTTLWIGQLDKKTQRQDITSLMEEFGQIESINMIPPRGCAYVAMVHR 551
Query: 205 QDAAKALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEID 262
QDA AL KL T K+ KTI +AWA KG+K ++K FW+V+ G+++IP+ ++ K D
Sbjct: 552 QDAQTALNKLSKTSVKVNQKTIKIAWAMNKGIKS-EYKKFWDVERGITFIPWGKV-KPND 609
Query: 263 YDYLEDGGVFDEDTV-PLW 280
L++GG+FD +T+ P W
Sbjct: 610 IQSLQEGGLFDPETLKPEW 628
>gi|198425063|ref|XP_002127718.1| PREDICTED: similar to Putative RNA-binding protein 16 (RNA-binding
motif protein 16) [Ciona intestinalis]
Length = 1224
Score = 188 bits (478), Expect = 2e-45, Method: Composition-based stats.
Identities = 87/140 (62%), Positives = 110/140 (78%), Gaps = 1/140 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ +K+FN ELS +Y+TKPPIS+AK+ +T+ AI+ IKFYKH+VQSVEKF+ KC+PEYKV
Sbjct: 1 MEAVKSFNDELSGIYETKPPISRAKMALLTKKAIKGIKFYKHIVQSVEKFVQKCRPEYKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF +KDVF PR +N+ TFQH+Y+CP EDK +I+RVLNLWQKN
Sbjct: 61 PGLYVIDSVVRQSRHQFGAEKDVFMPRLCKNIITTFQHIYKCPSEDKPRILRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADPNHP 139
VF +I+ L M P
Sbjct: 121 SVFPQEIVQQLMVMGGAPSP 140
Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats.
Identities = 47/107 (43%), Positives = 74/107 (69%), Gaps = 1/107 (0%)
Query: 147 IQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQD 206
+ + G ++ +TTLWIG++S V + EL GEYG+V S+N+IPPRGCA++CM +R D
Sbjct: 435 VPQKEGSISVLTTTLWIGNISSKVLQHELKALVGEYGEVESVNMIPPRGCAYICMKQRAD 494
Query: 207 AAKALYKLKNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIP 253
A++A+ K+++ +L GK++ WAP K M ++ K W + GV+YIP
Sbjct: 495 ASRAIGKIRHQRLAGKSLKCDWAPSKEMPEEH-KSTWVKEHGVNYIP 540
>gi|49900739|gb|AAH76260.1| Si:ch211-245g11.2 protein [Danio rerio]
Length = 726
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 83/135 (61%), Positives = 109/135 (80%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ + FN E+SS+ D PPIS+AK+ ++T++ I+AI+ YKHVVQ VEKFI +CKP+ KV
Sbjct: 1 MEAVNAFNGEMSSMMDMTPPISRAKMMSVTKAGIKAIRLYKHVVQIVEKFIKRCKPDLKV 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYV+DS++RQSRHQF DKD+FGPRF +N TFQ+L++CP +DK KI+RVLNLWQKN
Sbjct: 61 PGLYVVDSIIRQSRHQFGADKDLFGPRFLKNFTVTFQNLFECPEDDKGKILRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
EVF +II PL D+A
Sbjct: 121 EVFGLEIIQPLVDIA 135
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 62/139 (44%), Positives = 92/139 (66%), Gaps = 5/139 (3%)
Query: 145 AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRR 204
AE + ++C+TTLWIG L K Q ++++ E+G + SIN+IPPRGCA+V M R
Sbjct: 484 AEPSVKKETLSVCTTTLWIGQLDKKTQRQDITSLMEEFGQIESINMIPPRGCAYVAMVHR 543
Query: 205 QDAAKALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEID 262
QDA AL KL T K+ KTI +AWA KG+K ++K FW+V+ G+++IP+ ++ K D
Sbjct: 544 QDAQTALNKLSKTSVKVNQKTIKIAWAMNKGIKS-EYKKFWDVERGITFIPWGKV-KPND 601
Query: 263 YDYLEDGGVFDEDTV-PLW 280
L++GG+FD +T+ P W
Sbjct: 602 IQSLQEGGLFDPETLKPEW 620
>gi|432891556|ref|XP_004075582.1| PREDICTED: splicing factor, arginine/serine-rich 15-like [Oryzias
latipes]
Length = 598
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 87/135 (64%), Positives = 108/135 (80%), Gaps = 1/135 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ + FN EL S+ D KPPIS+AK+ ++T++AI+AIK YKHVVQ VEKFI KCKPE KV
Sbjct: 1 MEAVNAFNMELFSMIDMKPPISRAKMMSVTKAAIKAIKLYKHVVQIVEKFIKKCKPELKV 60
Query: 61 PALYVIDSLVRQSRHQFQ-DKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYV+DS+VRQSRHQF +KDVFGPRF +N TF +L+ CP +DK+KI+RVLNLWQKN
Sbjct: 61 PGLYVVDSIVRQSRHQFGVEKDVFGPRFLKNFADTFHYLFLCPEDDKNKILRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMA 134
VF +I+ PL DMA
Sbjct: 121 GVFEMNILQPLMDMA 135
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 54/129 (41%), Positives = 83/129 (64%), Gaps = 5/129 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+G L K Q+ +++ E+G + SI++IPPRGCA++ M RQDA AL KL
Sbjct: 405 SVCSTTLWVGQLDKKTQQSDVTSLLEEFGQIESIHMIPPRGCAYIVMVHRQDAYTALKKL 464
Query: 215 K--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVF 272
+ K+ K + +AWA KG+K K FW+V+ GV YIP+ ++ E + + +GG+
Sbjct: 465 SRGSYKVNQKPVKIAWALNKGIKSAH-KKFWDVERGVCYIPWSKVKVE-ELESYREGGML 522
Query: 273 DEDTV-PLW 280
D +T+ P W
Sbjct: 523 DAETLNPEW 531
>gi|47227091|emb|CAG00453.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1022
Score = 181 bits (460), Expect = 2e-43, Method: Composition-based stats.
Identities = 87/126 (69%), Positives = 105/126 (83%), Gaps = 1/126 (0%)
Query: 10 ELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSL 69
+L SL D+KPPIS+AK+ +IT+SAI+A+K YKHVVQ VEKFI KCKPEYKV LYV+DS+
Sbjct: 1 QLFSLMDSKPPISRAKMISITKSAIKAMKLYKHVVQIVEKFIRKCKPEYKVAGLYVVDSI 60
Query: 70 VRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIH 128
VRQSRHQF DKDVFGPRF +N+ TF++L CP ED+SKI+RVLNLWQKN VF ++I
Sbjct: 61 VRQSRHQFGADKDVFGPRFTKNISETFENLCLCPVEDRSKIVRVLNLWQKNGVFKIEVIQ 120
Query: 129 PLFDMA 134
PL DMA
Sbjct: 121 PLLDMA 126
Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats.
Identities = 56/129 (43%), Positives = 90/129 (69%), Gaps = 5/129 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+G L K Q+++++ E+G + SIN+IPPRGCA++ M RQDA +AL KL
Sbjct: 418 SICSTTLWVGQLDKRTQQQDVACLLEEFGQIESINMIPPRGCAYIVMTHRQDAYRALQKL 477
Query: 215 K--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVF 272
+ K+ K I +AWA KG+K + K +W+V+ GV+YIP+ ++ +E+ + L++GG+
Sbjct: 478 SRGSHKVNQKAIKIAWALNKGIK-SELKQYWDVELGVTYIPWSKI-REVQLEELKEGGIL 535
Query: 273 DEDTV-PLW 280
D +T+ P W
Sbjct: 536 DVETLSPEW 544
>gi|358413875|ref|XP_003582680.1| PREDICTED: protein SCAF8 [Bos taurus]
Length = 583
Score = 178 bits (452), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 83/110 (75%), Positives = 97/110 (88%), Gaps = 1/110 (0%)
Query: 26 ITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRHQF-QDKDVFG 84
+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP LYVIDS+VRQSRHQF Q+KDVF
Sbjct: 1 MTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFA 60
Query: 85 PRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHPLFDMA 134
PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF +II PL DMA
Sbjct: 61 PRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMA 110
Score = 124 bits (310), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 443 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 502
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 503 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 560
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 561 EGGMIDQETV 570
>gi|351708507|gb|EHB11426.1| Putative RNA-binding protein 16 [Heterocephalus glaber]
Length = 1246
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/110 (75%), Positives = 97/110 (88%), Gaps = 1/110 (0%)
Query: 26 ITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRHQF-QDKDVFG 84
+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP LYVIDS+VRQSRHQF Q+KDVF
Sbjct: 1 MTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFA 60
Query: 85 PRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHPLFDMA 134
PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF +II PL DMA
Sbjct: 61 PRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMA 110
Score = 124 bits (312), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 60/130 (46%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 443 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 502
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D D
Sbjct: 503 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLDGFA 560
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 561 EGGMIDQETV 570
>gi|344239858|gb|EGV95961.1| Putative RNA-binding protein 16 [Cricetulus griseus]
Length = 1244
Score = 177 bits (450), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 83/110 (75%), Positives = 97/110 (88%), Gaps = 1/110 (0%)
Query: 26 ITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRHQF-QDKDVFG 84
+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP LYVIDS+VRQSRHQF Q+KDVF
Sbjct: 1 MTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFA 60
Query: 85 PRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHPLFDMA 134
PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF +II PL DMA
Sbjct: 61 PRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMA 110
Score = 122 bits (307), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQD+ +
Sbjct: 443 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDSFR 502
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D D
Sbjct: 503 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLDGFA 560
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 561 EGGMIDQETV 570
>gi|148669693|gb|EDL01640.1| mCG121289, isoform CRA_a [Mus musculus]
Length = 1245
Score = 177 bits (448), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 83/110 (75%), Positives = 97/110 (88%), Gaps = 1/110 (0%)
Query: 26 ITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRHQF-QDKDVFG 84
+T IT++AI+AIKFYKHVVQSVEKFI KCKPEYKVP LYVIDS+VRQSRHQF Q+KDVF
Sbjct: 1 MTQITKAAIKAIKFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFA 60
Query: 85 PRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHPLFDMA 134
PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF +II PL DMA
Sbjct: 61 PRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMA 110
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQD+ +
Sbjct: 445 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDSFR 504
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D D
Sbjct: 505 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLDGFA 562
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 563 EGGMIDQETV 572
>gi|332229450|ref|XP_003263900.1| PREDICTED: splicing factor, arginine/serine-rich 15 isoform 3
[Nomascus leucogenys]
Length = 1218
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/135 (65%), Positives = 101/135 (74%), Gaps = 16/135 (11%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK CKPEYKV
Sbjct: 87 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIK---------------CKPEYKV 131
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 132 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 191
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 192 GVFKIEIIQPLLDMA 206
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 568 QVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 627
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 628 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELES 685
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 686 FCEGGMLDSDTLNPDW 701
>gi|297707803|ref|XP_002830675.1| PREDICTED: splicing factor, arginine/serine-rich 15 isoform 2
[Pongo abelii]
Length = 1133
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/135 (65%), Positives = 101/135 (74%), Gaps = 16/135 (11%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK CKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIK---------------CKPEYKV 45
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 46 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 105
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 106 GVFKIEIIQPLLDMA 120
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 482 QVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 541
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 542 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELES 599
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 600 FCEGGMLDSDTLNPDW 615
>gi|402862490|ref|XP_003895591.1| PREDICTED: splicing factor, arginine/serine-rich 15 isoform 3
[Papio anubis]
Length = 1138
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/135 (65%), Positives = 101/135 (74%), Gaps = 16/135 (11%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK CKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIK---------------CKPEYKV 45
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 46 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 105
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 106 GVFKIEIIQPLLDMA 120
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 480 QVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 539
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 540 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELES 597
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 598 FCEGGMLDSDTLNPDW 613
>gi|224451133|ref|NP_001138916.1| splicing factor, arginine/serine-rich 15 isoform 2 [Homo sapiens]
gi|332871680|ref|XP_003319090.1| PREDICTED: splicing factor, arginine/serine-rich 15 isoform 3 [Pan
troglodytes]
Length = 1132
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/135 (65%), Positives = 101/135 (74%), Gaps = 16/135 (11%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK CKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIK---------------CKPEYKV 45
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 46 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 105
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 106 GVFKIEIIQPLLDMA 120
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 482 QVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 541
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 542 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELES 599
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 600 FCEGGMLDSDTLNPDW 615
>gi|296232052|ref|XP_002761408.1| PREDICTED: splicing factor, arginine/serine-rich 15 isoform 2
[Callithrix jacchus]
Length = 1134
Score = 176 bits (445), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/135 (65%), Positives = 101/135 (74%), Gaps = 16/135 (11%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK CKPEYKV
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIK---------------CKPEYKV 45
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 46 PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN 105
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 106 GVFKIEIIQPLLDMA 120
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 481 QVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 540
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 541 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELES 598
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 599 FCEGGMLDSDTLNPDW 614
>gi|393909256|gb|EJD75380.1| splicing factor, variant [Loa loa]
Length = 1071
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 103/131 (78%)
Query: 2 DVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVP 61
+V++ FN EL SLY+ +PPISK KI IT++A++AIK+YKHVV VEKF++KCK EYK+P
Sbjct: 4 EVVRAFNAELVSLYELRPPISKKKIVDITKAAMKAIKYYKHVVFGVEKFLMKCKTEYKIP 63
Query: 62 ALYVIDSLVRQSRHQFQDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEV 121
LY IDS++RQSRHQF+DKDVFGPRFA N++AT +L C +DK K++RVLNLW+ +E+
Sbjct: 64 GLYCIDSIIRQSRHQFKDKDVFGPRFAINMQATLSNLLNCKADDKLKVVRVLNLWKSHEI 123
Query: 122 FTPDIIHPLFD 132
F + P D
Sbjct: 124 FDTGKLRPWLD 134
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 11/156 (7%)
Query: 135 DPNHPIHRELAEIQARNGVE--------NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVV 186
D N+P +R+L ++ + G+ + S TLW+G + E E+ E G+
Sbjct: 592 DHNNPAYRDLERLRRKMGLPWPPKEGHLLIASCTLWLGRIPSNCTENEIRQAIAEAGEPA 651
Query: 187 SINLIPPRGCAFVCMNRRQDAAKALYKL-KNTKLQGKTITLAWAPGKGMKDKDWKDFWEV 245
I++I R CA+V M R+ A + + ++ KN K+ K + L W G+G+K + + ++W+
Sbjct: 652 RISIIHSRACAYVTMKDRKAAFRVMDRMQKNFKIGEKNVKLNWGIGQGLKGERYAEYWDP 711
Query: 246 QDGVSYIPYDRLSKEIDYDYLEDGGVFDEDTVPLWL 281
G S IP+ L D + L +GG + +++P L
Sbjct: 712 DRGYSLIPHFALPS--DLESLIEGGHLEIESLPSHL 745
>gi|312076237|ref|XP_003140771.1| hypothetical protein LOAG_05186 [Loa loa]
Length = 854
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 103/131 (78%)
Query: 2 DVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVP 61
+V++ FN EL SLY+ +PPISK KI IT++A++AIK+YKHVV VEKF++KCK EYK+P
Sbjct: 4 EVVRAFNAELVSLYELRPPISKKKIVDITKAAMKAIKYYKHVVFGVEKFLMKCKTEYKIP 63
Query: 62 ALYVIDSLVRQSRHQFQDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEV 121
LY IDS++RQSRHQF+DKDVFGPRFA N++AT +L C +DK K++RVLNLW+ +E+
Sbjct: 64 GLYCIDSIIRQSRHQFKDKDVFGPRFAINMQATLSNLLNCKADDKLKVVRVLNLWKSHEI 123
Query: 122 FTPDIIHPLFD 132
F + P D
Sbjct: 124 FDTGKLRPWLD 134
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 11/156 (7%)
Query: 135 DPNHPIHRELAEIQARNGVE--------NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVV 186
D N+P +R+L ++ + G+ + S TLW+G + E E+ E G+
Sbjct: 592 DHNNPAYRDLERLRRKMGLPWPPKEGHLLIASCTLWLGRIPSNCTENEIRQAIAEAGEPA 651
Query: 187 SINLIPPRGCAFVCMNRRQDAAKALYKL-KNTKLQGKTITLAWAPGKGMKDKDWKDFWEV 245
I++I R CA+V M R+ A + + ++ KN K+ K + L W G+G+K + + ++W+
Sbjct: 652 RISIIHSRACAYVTMKDRKAAFRVMDRMQKNFKIGEKNVKLNWGIGQGLKGERYAEYWDP 711
Query: 246 QDGVSYIPYDRLSKEIDYDYLEDGGVFDEDTVPLWL 281
G S IP+ L D + L +GG + +++P L
Sbjct: 712 DRGYSLIPHFALPS--DLESLIEGGHLEIESLPSHL 745
>gi|393909257|gb|EJD75381.1| splicing factor [Loa loa]
Length = 1074
Score = 174 bits (440), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 103/131 (78%)
Query: 2 DVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVP 61
+V++ FN EL SLY+ +PPISK KI IT++A++AIK+YKHVV VEKF++KCK EYK+P
Sbjct: 4 EVVRAFNAELVSLYELRPPISKKKIVDITKAAMKAIKYYKHVVFGVEKFLMKCKTEYKIP 63
Query: 62 ALYVIDSLVRQSRHQFQDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEV 121
LY IDS++RQSRHQF+DKDVFGPRFA N++AT +L C +DK K++RVLNLW+ +E+
Sbjct: 64 GLYCIDSIIRQSRHQFKDKDVFGPRFAINMQATLSNLLNCKADDKLKVVRVLNLWKSHEI 123
Query: 122 FTPDIIHPLFD 132
F + P D
Sbjct: 124 FDTGKLRPWLD 134
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 81/156 (51%), Gaps = 11/156 (7%)
Query: 135 DPNHPIHRELAEIQARNGVE--------NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVV 186
D N+P +R+L ++ + G+ + S TLW+G + E E+ E G+
Sbjct: 592 DHNNPAYRDLERLRRKMGLPWPPKEGHLLIASCTLWLGRIPSNCTENEIRQAIAEAGEPA 651
Query: 187 SINLIPPRGCAFVCMNRRQDAAKALYKL-KNTKLQGKTITLAWAPGKGMKDKDWKDFWEV 245
I++I R CA+V M R+ A + + ++ KN K+ K + L W G+G+K + + ++W+
Sbjct: 652 RISIIHSRACAYVTMKDRKAAFRVMDRMQKNFKIGEKNVKLNWGIGQGLKGERYAEYWDP 711
Query: 246 QDGVSYIPYDRLSKEIDYDYLEDGGVFDEDTVPLWL 281
G S IP+ L D + L +GG + +++P L
Sbjct: 712 DRGYSLIPHFALPS--DLESLIEGGHLEIESLPSHL 745
>gi|327268609|ref|XP_003219089.1| PREDICTED: splicing factor, arginine/serine-rich 15-like [Anolis
carolinensis]
Length = 1148
Score = 171 bits (433), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/135 (63%), Positives = 100/135 (74%), Gaps = 16/135 (11%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+ + FNQEL SL + KPPIS+AK+ IT++AI+AIK CKPEYKV
Sbjct: 104 MEAVNAFNQELFSLMEMKPPISRAKMILITKAAIKAIK---------------CKPEYKV 148
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
P LYVIDS+VRQSRHQF DKDVFGPRF +N+ ATFQ+LY CP EDKSKI+RVLNLWQKN
Sbjct: 149 PGLYVIDSIVRQSRHQFGTDKDVFGPRFCKNIIATFQYLYLCPSEDKSKIVRVLNLWQKN 208
Query: 120 EVFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 209 GVFKIEIIQPLLDMA 223
Score = 116 bits (291), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 56/129 (43%), Positives = 87/129 (67%), Gaps = 5/129 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+G L K ++++ E+G + SIN+IPPRGCA++ M +RQDA +AL KL
Sbjct: 558 SVCSTTLWLGQLDKRATQQDVGGLLEEFGPIESINMIPPRGCAYIVMVQRQDANRALQKL 617
Query: 215 K--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVF 272
N K+ K+I +AWA KG+K D+K +W+V+ GV+Y+P+ ++ E D +GG+
Sbjct: 618 SRGNFKVNQKSIKIAWALNKGIK-PDYKQYWDVELGVTYVPWSKVKPE-DLQSFCEGGML 675
Query: 273 DEDTV-PLW 280
D +T+ P W
Sbjct: 676 DNETLSPEW 684
>gi|324502155|gb|ADY40950.1| RNA-binding protein 16 [Ascaris suum]
Length = 1083
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 78/147 (53%), Positives = 105/147 (71%)
Query: 2 DVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVP 61
+V+K FN EL SLY+ KPPISK KI IT++A++AIKFYKH+V VEKF+ KCK +YK+P
Sbjct: 4 EVVKAFNAELVSLYELKPPISKKKIVDITKAAMKAIKFYKHIVFCVEKFLTKCKADYKIP 63
Query: 62 ALYVIDSLVRQSRHQFQDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEV 121
LY IDS++RQSRHQF+DKDVFGPRFA N+ T +L C +DK K++RVLNLW+ + V
Sbjct: 64 GLYCIDSIIRQSRHQFKDKDVFGPRFAINMATTLSNLLSCKNDDKPKVVRVLNLWRSHGV 123
Query: 122 FTPDIIHPLFDMADPNHPIHRELAEIQ 148
F + P D H + + +++
Sbjct: 124 FDEAQVKPWLDYCREQHNLETDCMQVE 150
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 70/127 (55%), Gaps = 3/127 (2%)
Query: 156 MCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL- 214
+ S TLW G + E+++ + E G+ I +I R CA+V M R+ A + + +L
Sbjct: 592 VASCTLWFGRIPANCSEDDIRASVLEAGEPSRITIISSRACAYVTMKDRKSAFRVIDRLQ 651
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDE 274
KN ++ K++ L WA G+G+K + + FW+ G+S IPY L +E++ GG D
Sbjct: 652 KNMQVAKKSVKLNWATGQGLKGEKYAAFWDGVHGISQIPYSMLPEELEPLLE--GGHLDV 709
Query: 275 DTVPLWL 281
+T+P L
Sbjct: 710 ETLPPSL 716
>gi|326675794|ref|XP_002665299.2| PREDICTED: protein SCAF8 [Danio rerio]
Length = 1258
Score = 164 bits (416), Expect = 3e-38, Method: Composition-based stats.
Identities = 77/98 (78%), Positives = 86/98 (87%), Gaps = 1/98 (1%)
Query: 38 KFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQ 96
KFYKHVVQSVEKFI KCKPEYKVP LYVIDS+VRQSRHQF Q+KDVF PRF++N+ TFQ
Sbjct: 10 KFYKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSKNIIGTFQ 69
Query: 97 HLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHPLFDMA 134
+LY+CP +DKSKI+RVLNLWQKN VF DII PL DMA
Sbjct: 70 NLYRCPTDDKSKIVRVLNLWQKNNVFKSDIIQPLLDMA 107
Score = 122 bits (307), Expect = 1e-25, Method: Composition-based stats.
Identities = 59/130 (45%), Positives = 93/130 (71%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ V ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA++CM RQDA +
Sbjct: 440 RSRVLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYICMVHRQDAYR 499
Query: 210 ALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K +++K FW+V GV+YIP++++ + D D
Sbjct: 500 ALQKLSTGSYKIGSKVIKIAWALNKGVK-QEYKQFWDVDLGVTYIPWEKVKLD-DLDDFA 557
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 558 EGGMIDQETV 567
>gi|296483886|tpg|DAA26001.1| TPA: RNA binding motif protein 16-like [Bos taurus]
Length = 599
Score = 164 bits (415), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 82/127 (64%), Positives = 97/127 (76%), Gaps = 16/127 (12%)
Query: 9 QELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDS 68
+EL SL D KPPISKAK+T IT++AI+AIK CKPEYKVP LYVIDS
Sbjct: 35 EELYSLNDYKPPISKAKMTQITKAAIKAIK---------------CKPEYKVPGLYVIDS 79
Query: 69 LVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDII 127
+VRQSRHQF Q+KDVF PRF+ N+ +TFQ+LY+CP +DKSKI+RVLNLWQKN VF +II
Sbjct: 80 IVRQSRHQFGQEKDVFAPRFSNNIISTFQNLYRCPGDDKSKIVRVLNLWQKNNVFKSEII 139
Query: 128 HPLFDMA 134
PL DMA
Sbjct: 140 QPLLDMA 146
Score = 123 bits (309), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 469 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 528
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D +
Sbjct: 529 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLEGFA 586
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 587 EGGMIDQETV 596
>gi|256079783|ref|XP_002576164.1| ctd sr related rna binding protein [Schistosoma mansoni]
gi|360044274|emb|CCD81821.1| ctd sr related rna binding protein [Schistosoma mansoni]
Length = 1060
Score = 163 bits (412), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 76/140 (54%), Positives = 108/140 (77%), Gaps = 1/140 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD++ FN EL SL D++ P+S+AK+ +ITR+AI+A+K+YKHVVQSVEKFI KC PEYKV
Sbjct: 1 MDLVAAFNTELRSLTDSQLPVSRAKMASITRAAIKALKYYKHVVQSVEKFIAKCSPEYKV 60
Query: 61 PALYVIDSLVRQSRHQFQDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNE 120
P LYVID++VRQS++ +++KDV+GPRF RNL F L C +D+ ++R+L LWQK+
Sbjct: 61 PGLYVIDAIVRQSQYFYREKDVYGPRFLRNLVPVFVSLMNCIEKDRPMLMRMLYLWQKSS 120
Query: 121 VFTPDIIHPLFD-MADPNHP 139
VF ++I+ L ++DP +P
Sbjct: 121 VFPDEVINALCGVLSDPKNP 140
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 75/129 (58%), Gaps = 7/129 (5%)
Query: 156 MCSTTLWIGHLSKLVQEEELSDTFGEY--GDVVSINLIPPRGCAFVCMNRRQDAAKALYK 213
+ S T++IGHL K + E +L+ E G V+ N IPPRGCAFV R+ A +A+ +
Sbjct: 608 ILSHTVFIGHLHKQLAESKLTALCSEVTEGQVIECNFIPPRGCAFVTFATRRAAHRAVIQ 667
Query: 214 LKNTKLQGKTITLAWAPGKGMKDKD--WKDFWEVQDGVSYIPYD---RLSKEIDYDYLED 268
+ + + G+ I +AWAP G+K ++ ++W+ +G +Y+P + +L++ D L
Sbjct: 668 MDQSTMSGREIKVAWAPNLGIKSREDYVTNYWDTDEGCTYLPIEEVVKLTRPQFDDLLAG 727
Query: 269 GGVFDEDTV 277
G DE+++
Sbjct: 728 CGEVDEESL 736
>gi|340380739|ref|XP_003388879.1| PREDICTED: hypothetical protein LOC100637972 [Amphimedon
queenslandica]
Length = 697
Score = 162 bits (410), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 77/137 (56%), Positives = 101/137 (73%), Gaps = 1/137 (0%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
M+V+ F +EL LY++K P+S+AKI A+T+ A++AIK YKHVV VEKFI K YK+
Sbjct: 1 MEVVDEFKEELHGLYNSKLPVSRAKIGAVTKLAMKAIKHYKHVVMIVEKFISKSSAPYKL 60
Query: 61 PALYVIDSLVRQSRHQFQD-KDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKN 119
PALYVIDS+VRQSRHQF + K+V+GPRF + L ++QC +DK K+ RVLNLWQKN
Sbjct: 61 PALYVIDSIVRQSRHQFNETKEVYGPRFGKRLDKIMPLIHQCTEDDKPKVTRVLNLWQKN 120
Query: 120 EVFTPDIIHPLFDMADP 136
VF P+++ PL D A P
Sbjct: 121 SVFPPEVLQPLLDKAQP 137
Score = 107 bits (268), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 51/134 (38%), Positives = 82/134 (61%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAA 208
+ G + S T+WIGH+ K V +++LS +YG + SI+ I RGCA+V M R+ AA
Sbjct: 553 TKAGYVTVKSKTVWIGHIMKGVDKDQLSKMLEKYGAITSIDFIVARGCAYVVMETREAAA 612
Query: 209 KALYKLKNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLED 268
K + +L++ K+ G+ +AWAPG+G K K++ W+V G+S I +D + + + L +
Sbjct: 613 KVVDQLRDIKVLGQKCKVAWAPGRGAKGKEFDPSWDVNTGISNISWDNVKTKSQVEGLGN 672
Query: 269 GGVFDEDTVPLWLK 282
GGV D T+P L+
Sbjct: 673 GGVVDTSTLPPQLR 686
>gi|1438536|gb|AAC52659.1| rA4, partial [Rattus norvegicus]
Length = 235
Score = 162 bits (409), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 78/109 (71%), Positives = 90/109 (82%), Gaps = 1/109 (0%)
Query: 2 DVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVP 61
D + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP
Sbjct: 124 DAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVP 183
Query: 62 ALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKI 109
LYVIDS+VRQSRHQF DKDVFGPRF+ N+ ATFQ+LY CP EDK+ +
Sbjct: 184 GLYVIDSIVRQSRHQFGTDKDVFGPRFSENITATFQYLYLCPSEDKAHL 232
>gi|326913252|ref|XP_003202953.1| PREDICTED: splicing factor, arginine/serine-rich 15-like isoform 2
[Meleagris gallopavo]
Length = 1063
Score = 160 bits (405), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 81/126 (64%), Positives = 95/126 (75%), Gaps = 16/126 (12%)
Query: 10 ELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSL 69
+L SL + KPPIS+AK+ IT++AI+AIK CKPEYKVP LYVIDS+
Sbjct: 12 QLFSLMEMKPPISRAKMILITKAAIKAIK---------------CKPEYKVPGLYVIDSI 56
Query: 70 VRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIH 128
VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN VF +II
Sbjct: 57 VRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQ 116
Query: 129 PLFDMA 134
PL DMA
Sbjct: 117 PLLDMA 122
Score = 120 bits (301), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 88/129 (68%), Gaps = 5/129 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+G L K ++++ E+G + SIN+IPPRGCA++ M RQDA +AL KL
Sbjct: 463 SVCSTTLWVGQLDKRTTQQDVGSLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKL 522
Query: 215 K--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVF 272
N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E D + +GG+
Sbjct: 523 SRGNFKVNQKSIKIAWALNKGIK-PDYKQYWDVELGVTYIPWDKVKPE-DLESFCEGGML 580
Query: 273 DEDTV-PLW 280
D +T+ P W
Sbjct: 581 DNETLSPEW 589
>gi|402588941|gb|EJW82874.1| hypothetical protein WUBG_06216 [Wuchereria bancrofti]
Length = 435
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 70/119 (58%), Positives = 95/119 (79%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
+ SLY+ +PPISK KI IT++A++AIK+YKHVV VEKF++KCK EYK+P LY IDS++
Sbjct: 1 MVSLYELRPPISKKKIVDITKAAMKAIKYYKHVVFGVEKFLMKCKAEYKIPGLYCIDSII 60
Query: 71 RQSRHQFQDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHP 129
RQSRHQF+DKDVFGPRFA N++AT +L C ++K K++RVLNLW+ +E+F + P
Sbjct: 61 RQSRHQFKDKDVFGPRFAINMQATLSNLLNCKADEKLKVVRVLNLWKSHEIFDTAKLRP 119
>gi|338720767|ref|XP_001498774.3| PREDICTED: splicing factor, arginine/serine-rich 15 isoform 1
[Equus caballus]
Length = 1112
Score = 157 bits (397), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 79/120 (65%), Positives = 91/120 (75%), Gaps = 16/120 (13%)
Query: 16 DTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRH 75
D KPPIS+AK+ IT++AI+AIK CKPEYKVP LYVIDS+VRQSRH
Sbjct: 2 DMKPPISRAKMILITKAAIKAIK---------------CKPEYKVPGLYVIDSIVRQSRH 46
Query: 76 QF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHPLFDMA 134
QF DKDVFGPRF++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN VF +II PL DMA
Sbjct: 47 QFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMA 106
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 89/129 (68%), Gaps = 5/129 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA +AL KL
Sbjct: 472 SVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKL 531
Query: 215 K--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVF 272
N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + + +GG+
Sbjct: 532 SRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELESFCEGGML 589
Query: 273 DEDTV-PLW 280
D DT+ P W
Sbjct: 590 DSDTLNPDW 598
>gi|196014305|ref|XP_002117012.1| hypothetical protein TRIADDRAFT_31720 [Trichoplax adhaerens]
gi|190580503|gb|EDV20586.1| hypothetical protein TRIADDRAFT_31720 [Trichoplax adhaerens]
Length = 146
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 66/125 (52%), Positives = 101/125 (80%), Gaps = 1/125 (0%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
L S+Y TK P+S++K+ ++T++A+RA++FYKHVV ++EKFI KC PEYK+PALY++DS++
Sbjct: 1 LRSVYQTKLPLSRSKVHSVTKAAMRAMRFYKHVVMNLEKFIHKCGPEYKLPALYIMDSII 60
Query: 71 RQSRHQFQD-KDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHP 129
RQS++Q+ D KD++ PRF++N+ TF++LY+C +DKSKI+RVL LW +N ++ DI P
Sbjct: 61 RQSKYQYGDEKDMYAPRFSKNINETFENLYKCRNDDKSKIVRVLKLWTENGIYKEDITQP 120
Query: 130 LFDMA 134
L M
Sbjct: 121 LLTMG 125
>gi|47219523|emb|CAG09877.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1195
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 78/129 (60%), Positives = 88/129 (68%), Gaps = 24/129 (18%)
Query: 30 TRSAIRAIKFYKHVVQSVEKFIIK-----------------------CKPEYKVPALYVI 66
R + + FYKHVVQSVEKFI K CKPEYKVP LYVI
Sbjct: 81 NRGGVVLLSFYKHVVQSVEKFIQKPDVRRPEQGLLLTPALCFTPCKQCKPEYKVPGLYVI 140
Query: 67 DSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPD 125
DS+VRQSRHQF +KDVF PRF++N+ ATFQHLY+CP +DKSKI+RVLNLWQKN VF D
Sbjct: 141 DSIVRQSRHQFGTEKDVFAPRFSKNIIATFQHLYRCPSDDKSKIVRVLNLWQKNSVFKSD 200
Query: 126 IIHPLFDMA 134
II PL DMA
Sbjct: 201 IIQPLLDMA 209
Score = 122 bits (305), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 58/130 (44%), Positives = 90/130 (69%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA++CM RQDA +
Sbjct: 542 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYICMVHRQDAYR 601
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
A KL K+ K I +AWA KG+K +++K FW+V GV+YIP++++ K D D
Sbjct: 602 ARQKLSTGSFKIGSKVIKIAWALNKGVK-QEYKQFWDVDLGVTYIPWEKV-KVDDLDGFA 659
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 660 EGGIIDQETV 669
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 20/34 (58%), Positives = 26/34 (76%)
Query: 7 FNQELSSLYDTKPPISKAKITAITRSAIRAIKFY 40
F +L SL + KPPISKAK+T IT+S I+AIK +
Sbjct: 1 FPLQLYSLNEYKPPISKAKMTQITKSGIKAIKIH 34
>gi|395849062|ref|XP_003797155.1| PREDICTED: splicing factor, arginine/serine-rich 15 [Otolemur
garnettii]
Length = 1153
Score = 150 bits (379), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 73/98 (74%), Positives = 84/98 (85%), Gaps = 1/98 (1%)
Query: 10 ELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSL 69
+L SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP LYVIDS+
Sbjct: 64 KLFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSI 123
Query: 70 VRQSRHQF-QDKDVFGPRFARNLKATFQHLYQCPPEDK 106
VRQSRHQF DKDVFGPRF++N+ ATFQ+LY CP EDK
Sbjct: 124 VRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDK 161
Score = 120 bits (300), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 506 QVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 565
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 566 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELES 623
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 624 FCEGGMLDSDTLNPDW 639
>gi|358252887|dbj|GAA50438.1| protein SCAF8, partial [Clonorchis sinensis]
Length = 449
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 74/133 (55%), Positives = 98/133 (73%), Gaps = 1/133 (0%)
Query: 7 FNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVI 66
++ L+SL +T P+S+ K+ +ITR+A++AIKFYKHVVQSVEKFII+C E K+P LYVI
Sbjct: 141 LHKRLNSLKETPLPVSRKKMASITRAALKAIKFYKHVVQSVEKFIIRCPSELKIPGLYVI 200
Query: 67 DSLVRQSRHQFQDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDI 126
D++VRQS+ +QDKDV+GPRF RNL A F L QC +DK I RVL LWQ++ VF I
Sbjct: 201 DAVVRQSQSFYQDKDVYGPRFMRNLVAVFLSLLQCEEKDKPMISRVLYLWQRSSVFPLPI 260
Query: 127 IHPLFD-MADPNH 138
I L + + DP +
Sbjct: 261 IQALQNVLNDPEN 273
>gi|444718617|gb|ELW59428.1| Splicing factor, arginine/serine-rich 15 [Tupaia chinensis]
Length = 949
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 71/107 (66%), Positives = 81/107 (75%), Gaps = 16/107 (14%)
Query: 29 ITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRHQF-QDKDVFGPRF 87
IT++AI+AIK CKPEYKVP LYVIDS+VRQSRHQF DKDVFGPRF
Sbjct: 4 ITKAAIKAIK---------------CKPEYKVPGLYVIDSIVRQSRHQFGTDKDVFGPRF 48
Query: 88 ARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHPLFDMA 134
++N+ ATFQ+LY CP EDKSKI+RVLNLWQKN VF +II PL DMA
Sbjct: 49 SKNITATFQYLYLCPSEDKSKIVRVLNLWQKNGVFKIEIIQPLLDMA 95
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 60/89 (67%), Gaps = 5/89 (5%)
Query: 195 GCAFVCMNRRQDAAKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYI 252
GCA++ M RQDA +AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YI
Sbjct: 510 GCAYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYI 568
Query: 253 PYDRLSKEIDYDYLEDGGVFDEDTV-PLW 280
P+D++ E + + +GG+ D DT+ P W
Sbjct: 569 PWDKVKPE-ELESFCEGGMLDNDTLNPDW 596
>gi|170050235|ref|XP_001859916.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167871913|gb|EDS35296.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 100
Score = 142 bits (357), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 69/101 (68%), Positives = 82/101 (81%), Gaps = 7/101 (6%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD ++ FNQELS LY+ KPPISKAK+ +ITRSA++AIKFYKHVVQSVEKFI KCK EYK+
Sbjct: 1 MDTVRIFNQELSGLYEAKPPISKAKMASITRSAMKAIKFYKHVVQSVEKFISKCKSEYKI 60
Query: 61 PALYVIDSLVRQSRHQF-QDKDVFGPRFARNLKATFQHLYQ 100
P LYVIDS+VRQSRHQF +KDVF PR+ TF + Y+
Sbjct: 61 PGLYVIDSIVRQSRHQFGTEKDVFAPRY------TFTYTYR 95
>gi|17506321|ref|NP_491403.1| Protein NRD-1 [Caenorhabditis elegans]
gi|351059726|emb|CCD67318.1| Protein NRD-1 [Caenorhabditis elegans]
Length = 988
Score = 134 bits (337), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 91/132 (68%), Gaps = 1/132 (0%)
Query: 2 DVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVP 61
+V+K+FN ELSSL+D+K +SK KI IT++AI+A YKHVV SVEK I KCKP+ ++
Sbjct: 4 EVMKSFNNELSSLFDSKN-MSKNKIQDITKAAIKAKSQYKHVVFSVEKLINKCKPDQRLN 62
Query: 62 ALYVIDSLVRQSRHQFQDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEV 121
LYVIDS+VR S+HQ ++KD FGPRF + L +C ++K + +R LNLW N+V
Sbjct: 63 VLYVIDSIVRASKHQLKEKDTFGPRFMKQFDKFLMPLLKCGQKEKMRTVRTLNLWMSNKV 122
Query: 122 FTPDIIHPLFDM 133
F I PL +M
Sbjct: 123 FKESEIQPLREM 134
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R G + S TLW+ + + E +L G+ + +I R CA++ M R+ A
Sbjct: 516 RIGFTIIASRTLWLKKIPTNIVENDLKQAVESCGEASRVKVIGNRACAYITMENRRSAND 575
Query: 210 ALYKLKNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDG 269
+ K++ + K + + WA GM + D W+ GV IPY++L +D L +G
Sbjct: 576 VVSKMREVSVAKKMVKVYWARSPGMDSDQFSDLWDSNRGVLEIPYEKLP--LDLVALCEG 633
Query: 270 GVFDEDTVPL 279
+ D +++P+
Sbjct: 634 AMLDIESLPI 643
>gi|7498075|pir||T30930 hypothetical protein D1007.7 - Caenorhabditis elegans
Length = 998
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 67/132 (50%), Positives = 91/132 (68%), Gaps = 1/132 (0%)
Query: 2 DVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVP 61
+V+K+FN ELSSL+D+K +SK KI IT++AI+A YKHVV SVEK I KCKP+ ++
Sbjct: 4 EVMKSFNNELSSLFDSKN-MSKNKIQDITKAAIKAKSQYKHVVFSVEKLINKCKPDQRLN 62
Query: 62 ALYVIDSLVRQSRHQFQDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEV 121
LYVIDS+VR S+HQ ++KD FGPRF + L +C ++K + +R LNLW N+V
Sbjct: 63 VLYVIDSIVRASKHQLKEKDTFGPRFMKQFDKFLMPLLKCGQKEKMRTVRTLNLWMSNKV 122
Query: 122 FTPDIIHPLFDM 133
F I PL +M
Sbjct: 123 FKESEIQPLREM 134
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/130 (26%), Positives = 63/130 (48%), Gaps = 2/130 (1%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R G + S TLW+ + + E +L G+ + +I R CA++ M R+ A
Sbjct: 526 RIGFTIIASRTLWLKKIPTNIVENDLKQAVESCGEASRVKVIGNRACAYITMENRRSAND 585
Query: 210 ALYKLKNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDG 269
+ K++ + K + + WA GM + D W+ GV IPY++L +D L +G
Sbjct: 586 VVSKMREVSVAKKMVKVYWARSPGMDSDQFSDLWDSNRGVLEIPYEKLP--LDLVALCEG 643
Query: 270 GVFDEDTVPL 279
+ D +++P+
Sbjct: 644 AMLDIESLPI 653
>gi|268564121|ref|XP_002639021.1| Hypothetical protein CBG22270 [Caenorhabditis briggsae]
Length = 980
Score = 127 bits (320), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 64/130 (49%), Positives = 88/130 (67%), Gaps = 2/130 (1%)
Query: 3 VIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPA 62
V+K FN EL++L+D++ +SK KI IT++AI+A K YKHVV EK I KCKP+ ++
Sbjct: 5 VLKNFNSELATLFDSRN-LSKNKIQDITKAAIKAQKHYKHVVYGCEKLITKCKPDQRLNV 63
Query: 63 LYVIDSLVRQSRHQFQDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVF 122
LYVIDS+VR + HQ + D+FGPRF + F+ L +C +DK K++R LNLW N+VF
Sbjct: 64 LYVIDSIVRAANHQLK-HDMFGPRFMKQFDKFFEPLMKCNSKDKMKLVRTLNLWMANKVF 122
Query: 123 TPDIIHPLFD 132
T I P D
Sbjct: 123 TEAQIQPYRD 132
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 3/127 (2%)
Query: 152 GVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKAL 211
G + S TL + L V E ++ G+ V + +I CAFV M R+ A + +
Sbjct: 502 GFTIVASRTLLLKKLPTNVVEADVKQAVESCGEAVRVKVISKSACAFVTMETRKSANEVV 561
Query: 212 YKLKNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGV 271
KL+ + K + + WA G +D + + W+ GV +PYD+L D +G +
Sbjct: 562 QKLREVSVAKKMVRVYWARSPGQED-SFVEHWDCNRGVWELPYDKLPS--DLKTFCEGSM 618
Query: 272 FDEDTVP 278
D +++P
Sbjct: 619 LDVESLP 625
>gi|427791821|gb|JAA61362.1| hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 286
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/86 (62%), Positives = 70/86 (81%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CS TLW+GH+ K V E +L DTFGE+G +V +++IPPRGCA+VCM+RRQDA +AL KL
Sbjct: 201 SVCSATLWLGHVPKSVSEMDLHDTFGEFGTIVRVDMIPPRGCAYVCMDRRQDAFRALQKL 260
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWK 240
KN KLQG I +AWAPGKG+K K+ K
Sbjct: 261 KNLKLQGSLIKMAWAPGKGVKGKELK 286
>gi|341883039|gb|EGT38974.1| CBN-NRD-1 protein [Caenorhabditis brenneri]
Length = 866
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 89/131 (67%), Gaps = 1/131 (0%)
Query: 2 DVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVP 61
+V+K FN ELS+L+D+K +SK KI I+++AI+A K YKHVV +VEK I K KPE ++
Sbjct: 4 EVVKKFNTELSTLFDSKN-VSKTKIQDISKAAIKAHKQYKHVVFAVEKLITKSKPEQRLT 62
Query: 62 ALYVIDSLVRQSRHQFQDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEV 121
LYV+DS++R SR Q +++D FGPRF + L +C ++K +++R LNLW N+V
Sbjct: 63 VLYVVDSIIRASRSQLKERDTFGPRFLKQFDKFLDPLLKCGTKEKLRMVRTLNLWMSNKV 122
Query: 122 FTPDIIHPLFD 132
+T + P D
Sbjct: 123 YTEAEVQPFRD 133
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 62/129 (48%), Gaps = 2/129 (1%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R G + S TLW+ + V E +L G+ + +I R CAF+ M R+ A +
Sbjct: 488 RPGYTVIASRTLWLKKIPTNVLESDLKQAVESCGEASRVKVIGNRACAFITMETRKAANE 547
Query: 210 ALYKLKNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDG 269
+ KL+ + K + + WA GM ++ D W+ GV IPYDRL D +G
Sbjct: 548 VVQKLREVSVAKKMVKVYWARSPGMDSDEFTDLWDSNRGVWEIPYDRLPS--DLVAFCEG 605
Query: 270 GVFDEDTVP 278
+ D +++P
Sbjct: 606 AMLDLESLP 614
>gi|308498351|ref|XP_003111362.1| hypothetical protein CRE_03695 [Caenorhabditis remanei]
gi|308240910|gb|EFO84862.1| hypothetical protein CRE_03695 [Caenorhabditis remanei]
Length = 497
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/129 (46%), Positives = 88/129 (68%), Gaps = 1/129 (0%)
Query: 2 DVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVP 61
D++K FN EL++L+D++ +SK KI IT +AI+A K YKHVV ++EK + KCKPE ++
Sbjct: 4 DLLKKFNAELATLHDSRN-LSKNKIQEITNAAIKAQKQYKHVVYALEKLMTKCKPEQRLH 62
Query: 62 ALYVIDSLVRQSRHQFQDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEV 121
LYVID++VR S+HQ +++D FGPRF + L +C +K KI+R LNLW N +
Sbjct: 63 VLYVIDNVVRSSKHQLKERDTFGPRFLEQWDKFMEPLLKCSWREKLKIVRTLNLWLCNRI 122
Query: 122 FTPDIIHPL 130
FT + P+
Sbjct: 123 FTETQMRPI 131
>gi|341892473|gb|EGT48408.1| hypothetical protein CAEBREN_29256 [Caenorhabditis brenneri]
Length = 986
Score = 124 bits (312), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 89/131 (67%), Gaps = 1/131 (0%)
Query: 2 DVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVP 61
+V+K FN ELS+L+D+K +SK KI I+++AI+A K YKHVV +VEK I K KPE ++
Sbjct: 4 EVVKKFNTELSTLFDSKN-VSKTKIQDISKAAIKAHKQYKHVVFAVEKLITKSKPEQRLT 62
Query: 62 ALYVIDSLVRQSRHQFQDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEV 121
LYV+DS++R SR Q +++D FGPRF + L +C ++K +++R LNLW N+V
Sbjct: 63 VLYVVDSIIRASRSQLKERDTFGPRFLKQFDKFLDPLLKCGTKEKLRMVRTLNLWMSNKV 122
Query: 122 FTPDIIHPLFD 132
+T + P D
Sbjct: 123 YTEAEVQPFRD 133
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 63/129 (48%), Gaps = 2/129 (1%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R G + S TLW+ + VQE +L G+ + +I R CAF+ M R+ A +
Sbjct: 488 RLGYTVIASRTLWLKKIPTNVQESDLKQAVESCGEASRVKVIGNRACAFITMETRKAANE 547
Query: 210 ALYKLKNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDG 269
+ KL+ + K + + WA GM ++ D W+ GV IPYDRL D +G
Sbjct: 548 VVQKLREVSVAKKMVKVYWARSPGMDSDEFTDLWDSNRGVWEIPYDRLPS--DLVAFCEG 605
Query: 270 GVFDEDTVP 278
+ D +++P
Sbjct: 606 AMLDLESLP 614
>gi|308498203|ref|XP_003111288.1| CRE-NRD-1 protein [Caenorhabditis remanei]
gi|308240836|gb|EFO84788.1| CRE-NRD-1 protein [Caenorhabditis remanei]
Length = 900
Score = 124 bits (310), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 59/129 (45%), Positives = 89/129 (68%), Gaps = 1/129 (0%)
Query: 2 DVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVP 61
D++K FN EL++L+D++ +SK KI IT +AI+A K YKHVV ++EK + KCKPE ++
Sbjct: 4 DLLKKFNAELATLHDSRN-LSKNKIQEITNAAIKAQKQYKHVVYALEKLMTKCKPEQRLH 62
Query: 62 ALYVIDSLVRQSRHQFQDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEV 121
LYVID+++R S+HQ +++D FGPRF + + L +C +K KI+R LNLW N +
Sbjct: 63 VLYVIDNVIRSSKHQLKERDTFGPRFLKQWDKFMEPLLKCSWREKLKIVRTLNLWLCNRI 122
Query: 122 FTPDIIHPL 130
FT + P+
Sbjct: 123 FTETQMQPI 131
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 58/127 (45%), Gaps = 2/127 (1%)
Query: 152 GVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKAL 211
GV + S TL + + V E +L G+ + +I R CAF+ M R+ A + +
Sbjct: 521 GVTIIASRTLLLKKIPTNVVESDLKQAVERCGEASRVKIIGNRACAFITMETRKAANEVI 580
Query: 212 YKLKNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGV 271
K + + K + + WA GM + + W+ GV +PY +L D +G +
Sbjct: 581 QKCREVVVAKKKVKVYWARSPGMDSEQFASLWDSNRGVWEVPYQQLP--ADLVAFCEGAM 638
Query: 272 FDEDTVP 278
D +++P
Sbjct: 639 LDLESLP 645
>gi|26328239|dbj|BAC27860.1| unnamed protein product [Mus musculus]
Length = 807
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 59/130 (45%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQD+ +
Sbjct: 7 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDSFR 66
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ K D D
Sbjct: 67 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKV-KVDDLDGFA 124
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 125 EGGMIDQETV 134
>gi|119630291|gb|EAX09886.1| splicing factor, arginine/serine-rich 15, isoform CRA_c [Homo
sapiens]
Length = 838
Score = 121 bits (303), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 443 QVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 502
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 503 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELES 560
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 561 FCEGGMLDSDTLNPDW 576
Score = 90.9 bits (224), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 64/134 (47%), Gaps = 53/134 (39%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI K K
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKSK----- 55
Query: 61 PALYVIDSLVRQSRHQFQDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNE 120
I+RVLNLWQKN
Sbjct: 56 ------------------------------------------------IVRVLNLWQKNG 67
Query: 121 VFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 68 VFKIEIIQPLLDMA 81
>gi|345305045|ref|XP_001507534.2| PREDICTED: smoothelin-like [Ornithorhynchus anatinus]
Length = 1133
Score = 121 bits (303), Expect = 4e-25, Method: Composition-based stats.
Identities = 57/87 (65%), Positives = 70/87 (80%), Gaps = 1/87 (1%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLV 70
+S++ T+ + K+ IT++AI+AIK YKHVVQ VEKFI KCKPEYKVP LYVIDS+V
Sbjct: 825 VSTITKTERLVHSTKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKVPGLYVIDSIV 884
Query: 71 RQSRHQF-QDKDVFGPRFARNLKATFQ 96
RQSRHQF DKDVFGPRF++N+ ATF
Sbjct: 885 RQSRHQFGTDKDVFGPRFSKNITATFH 911
>gi|149038498|gb|EDL92828.1| RNA binding motif protein 16 [Rattus norvegicus]
Length = 1091
Score = 120 bits (302), Expect = 5e-25, Method: Composition-based stats.
Identities = 58/130 (44%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQD+ +
Sbjct: 291 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDSFR 350
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ + D D
Sbjct: 351 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKVKVD-DLDGFA 408
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 409 EGGMIDQETV 418
>gi|7512570|pir||T17221 hypothetical protein DKFZp434E098.1 - human (fragments)
gi|5912109|emb|CAB55911.1| hypothetical protein [Homo sapiens]
Length = 667
Score = 120 bits (302), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 308 QVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 367
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 368 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELES 425
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 426 FCEGGMLDSDTLNPDW 441
>gi|119630292|gb|EAX09887.1| splicing factor, arginine/serine-rich 15, isoform CRA_d [Homo
sapiens]
Length = 1071
Score = 120 bits (300), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 443 QVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 502
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 503 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELES 560
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 561 FCEGGMLDSDTLNPDW 576
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 64/134 (47%), Gaps = 53/134 (39%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
MD + FNQEL SL D KPPIS+AK+ IT++AI+AIK YKHVVQ VEKFI K K
Sbjct: 1 MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKSK----- 55
Query: 61 PALYVIDSLVRQSRHQFQDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNE 120
I+RVLNLWQKN
Sbjct: 56 ------------------------------------------------IVRVLNLWQKNG 67
Query: 121 VFTPDIIHPLFDMA 134
VF +II PL DMA
Sbjct: 68 VFKIEIIQPLLDMA 81
>gi|335278872|ref|XP_003121181.2| PREDICTED: protein SCAF8 [Sus scrofa]
Length = 1006
Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats.
Identities = 58/130 (44%), Positives = 91/130 (70%), Gaps = 4/130 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R+ ++CSTTLW+G + K +++L++ F E+G + SIN+IPPRGCA+VCM RQDA +
Sbjct: 205 RSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCMVHRQDAFR 264
Query: 210 ALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
AL KL + K+ K I +AWA KG+K ++K FW+V GV+YIP++++ + D +
Sbjct: 265 ALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDVDLGVTYIPWEKVKVD-DLEGFA 322
Query: 268 DGGVFDEDTV 277
+GG+ D++TV
Sbjct: 323 EGGMIDQETV 332
>gi|301786859|ref|XP_002928846.1| PREDICTED: splicing factor, arginine/serine-rich 15-like, partial
[Ailuropoda melanoleuca]
Length = 841
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 89/129 (68%), Gaps = 5/129 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA +AL KL
Sbjct: 210 SVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKL 269
Query: 215 K--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVF 272
N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + + +GG+
Sbjct: 270 SRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELESFCEGGML 327
Query: 273 DEDTV-PLW 280
D DT+ P W
Sbjct: 328 DSDTLNPDW 336
>gi|281348262|gb|EFB23846.1| hypothetical protein PANDA_018900 [Ailuropoda melanoleuca]
Length = 814
Score = 118 bits (296), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 58/129 (44%), Positives = 89/129 (68%), Gaps = 5/129 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA +AL KL
Sbjct: 183 SVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDAYRALQKL 242
Query: 215 K--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVF 272
N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + + +GG+
Sbjct: 243 SRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELESFCEGGML 300
Query: 273 DEDTV-PLW 280
D DT+ P W
Sbjct: 301 DSDTLNPDW 309
>gi|16198075|gb|AAL13828.1| LD29226p [Drosophila melanogaster]
Length = 773
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 49/82 (59%), Positives = 69/82 (84%)
Query: 201 MNRRQDAAKALYKLKNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKE 260
MNRRQDA KA+ LKN KLQG+ IT++WA GKG+K K+WKD+W+++ GV+YIP+ +LS +
Sbjct: 1 MNRRQDAHKAMQALKNHKLQGRAITISWAAGKGVKSKEWKDYWDLELGVTYIPWSKLSSD 60
Query: 261 IDYDYLEDGGVFDEDTVPLWLK 282
D+D LE+GG+FDEDT+P+ +K
Sbjct: 61 TDFDALEEGGMFDEDTMPIQMK 82
>gi|149059801|gb|EDM10684.1| splicing factor, arginine/serine-rich 15, isoform CRA_b [Rattus
norvegicus]
Length = 1032
Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats.
Identities = 59/136 (43%), Positives = 92/136 (67%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q ++ ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 395 QIKSETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 454
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 455 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADFKQYWDVELGVTYIPWDKVKAE-ELES 512
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 513 FCEGGMLDSDTLNPDW 528
>gi|6685965|sp|Q63627.1|SFR15_RAT RecName: Full=Splicing factor, arginine/serine-rich 15; AltName:
Full=CTD-binding SR-like protein RA4; AltName:
Full=SR-related and CTD-associated factor 4
gi|1438537|gb|AAC52660.1| rA4, partial [Rattus norvegicus]
Length = 1048
Score = 117 bits (294), Expect = 4e-24, Method: Composition-based stats.
Identities = 59/136 (43%), Positives = 92/136 (67%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q ++ ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 411 QIKSETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 470
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 471 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADFKQYWDVELGVTYIPWDKVKAE-ELES 528
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 529 FCEGGMLDSDTLNPDW 544
>gi|6330211|dbj|BAA86486.1| KIAA1172 protein [Homo sapiens]
Length = 929
Score = 117 bits (292), Expect = 8e-24, Method: Composition-based stats.
Identities = 59/136 (43%), Positives = 91/136 (66%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 301 QVKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 360
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E + +
Sbjct: 361 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPE-ELES 418
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 419 FCEGGMLDSDTLNPDW 434
>gi|344245356|gb|EGW01460.1| Splicing factor, arginine/serine-rich 15 [Cricetulus griseus]
Length = 992
Score = 116 bits (291), Expect = 1e-23, Method: Composition-based stats.
Identities = 58/136 (42%), Positives = 92/136 (67%), Gaps = 5/136 (3%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q ++ ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 507 QIKSETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 566
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+Y+P+D++ E + +
Sbjct: 567 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYVPWDKVKPE-ELES 624
Query: 266 LEDGGVFDEDTV-PLW 280
+GG+ D DT+ P W
Sbjct: 625 FCEGGMLDGDTLNPEW 640
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 22/29 (75%), Positives = 24/29 (82%)
Query: 106 KSKIIRVLNLWQKNEVFTPDIIHPLFDMA 134
KSKI+RVLNLWQKN VF +II PL DMA
Sbjct: 24 KSKIVRVLNLWQKNGVFKIEIIQPLLDMA 52
>gi|326436386|gb|EGD81956.1| hypothetical protein PTSG_02641 [Salpingoeca sp. ATCC 50818]
Length = 863
Score = 115 bits (289), Expect = 2e-23, Method: Composition-based stats.
Identities = 55/128 (42%), Positives = 87/128 (67%), Gaps = 4/128 (3%)
Query: 4 IKTFNQELSSLYDTKPPISKAKITAITRSAIRA-IKFYKHVVQSVEKFIIKCKPEYKVPA 62
I F EL+SL K P+S+ KI +T+ A+ K++K VV +E+ I K + + KVP
Sbjct: 6 IPAFEAELASL---KAPVSQDKIRTLTKLALTDYFKYFKFVVFHIERSISKARSDLKVPL 62
Query: 63 LYVIDSLVRQSRHQFQDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVF 122
LYVIDS++ SRH++ D+DV+ PRF + +K TFQHL++C D+ ++++VL LW+KN V+
Sbjct: 63 LYVIDSIINNSRHKYGDEDVYAPRFGKAIKPTFQHLFKCSSADQKRVMQVLKLWKKNNVY 122
Query: 123 TPDIIHPL 130
+ ++I L
Sbjct: 123 SEELIDSL 130
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 63/132 (47%), Gaps = 6/132 (4%)
Query: 152 GVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVS--INLIPPRGCAFVCMNRRQDAAK 209
G + S+TLWIG L + +E++ +YG + I + P + AFV ++ Q
Sbjct: 363 GCIRLASSTLWIGSLPSDITKEQVLRLVRDYGVLKPGHIKVDPAKHQAFVILSSHQATGA 422
Query: 210 ALYKLKNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDG 269
A L NT+ G+TI +A +G + ++ W+VQ G S++P + + D G
Sbjct: 423 AHNALNNTEAFGRTIQTNFA--RGFRQRN-NIGWDVQTGYSFLPLGDV-EPTDLRGYTQG 478
Query: 270 GVFDEDTVPLWL 281
V D T P L
Sbjct: 479 CVVDRATCPAHL 490
>gi|313232302|emb|CBY09411.1| unnamed protein product [Oikopleura dioica]
Length = 1215
Score = 111 bits (278), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 57/128 (44%), Positives = 84/128 (65%), Gaps = 6/128 (4%)
Query: 4 IKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPAL 63
+K FN+EL+ + PP+S++K+ AIT S ++AIK YKHVVQ+VEKFI K KP YKV L
Sbjct: 396 LKAFNEELAGICSESPPVSRSKMKAITTSGMKAIKMYKHVVQNVEKFISKSKPTYKVTGL 455
Query: 64 YVIDSLVRQSRHQFQ-DKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVF 122
YVID+LVR+S+ +F DKDV+ RF ++L + DK K +++ LW+K + +
Sbjct: 456 YVIDALVRKSQSEFGPDKDVYTKRFQKHLAKS-----AISSSDKEKCKKIVFLWRKGKTY 510
Query: 123 TPDIIHPL 130
++ L
Sbjct: 511 EESLLDEL 518
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 69/134 (51%), Gaps = 5/134 (3%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEE----LSDTFGEYGDVVSINLIPPRGCAFVCMNRRQ 205
++G + S T+WIG++SK EE + D+ I + RGCA+V M R
Sbjct: 763 KDGKGCVASRTIWIGNISKGDCTEESVKNMIKNVDRVDDIQDITALHSRGCAYVVMKTRA 822
Query: 206 DAAKALYKLKNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEID-YD 264
A K L KL + + + + + WA G+KD + + +++ +G ++I Y +L +I+
Sbjct: 823 AAFKTLQKLASKRGREEKRKVDWAINSGLKDAEMQAYFDKAEGAAFIEYSKLPDDIEVLI 882
Query: 265 YLEDGGVFDEDTVP 278
GGV D +++P
Sbjct: 883 KWAHGGVIDIESMP 896
>gi|355715627|gb|AES05388.1| RNA binding motif protein 16 [Mustela putorius furo]
Length = 142
Score = 111 bits (277), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 54/124 (43%), Positives = 82/124 (66%), Gaps = 3/124 (2%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q + ++CSTTLW+G L K +++++ E+G + SIN+IPPRGCA++ M RQDA
Sbjct: 18 QIKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGCAYIVMVHRQDA 77
Query: 208 AKALYKLK--NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
+AL KL N K+ K+I +AWA KG+K D+K +W+V+ GV+YIP+D++ E +
Sbjct: 78 YRALQKLSRGNYKVNQKSIKIAWALNKGIK-ADYKQYWDVELGVTYIPWDKVKPEELESF 136
Query: 266 LEDG 269
E G
Sbjct: 137 CEGG 140
>gi|328773613|gb|EGF83650.1| hypothetical protein BATDEDRAFT_85170 [Batrachochytrium
dendrobatidis JAM81]
Length = 518
Score = 100 bits (249), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 81/124 (65%), Gaps = 5/124 (4%)
Query: 7 FNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVI 66
F++EL +L ++K P+S ++IT +T+ AI IK YKH+V S+EKF+ KC+P+YK+ LYVI
Sbjct: 12 FDKELYALSESKLPVSASRITTLTKLAIVHIKLYKHIVHSIEKFVQKCQPDYKLAGLYVI 71
Query: 67 DSLVRQS-----RHQFQDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEV 121
DS++R S + + V+ RF L+ F +L Q +D++++ RV+ LW K+ +
Sbjct: 72 DSILRASLKPTAKEKAPTTSVYVRRFEEKLENIFTNLVQANLKDRTRMKRVVALWVKSNI 131
Query: 122 FTPD 125
+ +
Sbjct: 132 LSSE 135
>gi|440794238|gb|ELR15405.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 792
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 75/124 (60%), Gaps = 12/124 (9%)
Query: 4 IKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPAL 63
++ F EL S+ + KPP+S K + YK+VV VEKFI K KPE+++ AL
Sbjct: 1 MEQFTDELRSVQNHKPPLSANK------------QHYKNVVNEVEKFIKKAKPEHRLTAL 48
Query: 64 YVIDSLVRQSRHQFQDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFT 123
Y+ID++VR S QF KDV+ RF NL+ + ++ QC +D+ RV+ LW KN+VF
Sbjct: 49 YIIDAIVRGSIRQFGSKDVYVGRFTANLERSLDYILQCSEKDQKAARRVIALWHKNKVFP 108
Query: 124 PDII 127
P +I
Sbjct: 109 PSVI 112
>gi|320165949|gb|EFW42848.1| conserved hypothetical protein [Capsaspora owczarzaki ATCC 30864]
Length = 745
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 75/111 (67%), Gaps = 1/111 (0%)
Query: 21 ISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRHQFQDK 80
+S +I A+++ A+R K YKH+V +E+FI + + E+K+ +Y+ID++VR S+H+ K
Sbjct: 56 VSSKRIHAVSKIAVRNYKHYKHIVHCIERFIHRARAEHKLAGVYIIDAIVRGSQHKLGAK 115
Query: 81 DVFGPRFARNLKATFQHLY-QCPPEDKSKIIRVLNLWQKNEVFTPDIIHPL 130
D + RF RNL AT ++ + +C D+ ++ R+++LW +N +F DI+ P+
Sbjct: 116 DNYADRFGRNLGATIEYCFNKCSAVDQDRVRRIVSLWLQNHIFPFDIVAPI 166
>gi|241997408|ref|XP_002433353.1| conserved hypothetical protein [Ixodes scapularis]
gi|215490776|gb|EEC00417.1| conserved hypothetical protein [Ixodes scapularis]
Length = 223
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/71 (61%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++CS+TLW+GH+ K V E +L DTFGE+G +V I +I PRGCAFVCM+RRQDA +AL KL
Sbjct: 151 SVCSSTLWLGHVPKSVSETDLHDTFGEFGSIVKIEIIAPRGCAFVCMDRRQDAFRALQKL 210
Query: 215 -KNTKLQGKTI 224
K KLQG I
Sbjct: 211 AKALKLQGSLI 221
>gi|221120730|ref|XP_002163748.1| PREDICTED: uncharacterized protein LOC100197273 [Hydra
magnipapillata]
Length = 1177
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 73/126 (57%), Gaps = 3/126 (2%)
Query: 156 MCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLK 215
+ S T+W+G L K + + + D F +YG++ SI+ I RGCAFV M R +A +AL LK
Sbjct: 409 VASITVWVGRLPKNLSIDVVHDAFQQYGEIKSIDYIEARGCAFVTMKSRVEAERALRHLK 468
Query: 216 NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDED 275
N ++ G + + W KG+ + + FW+ G +YIP D L E + L +G + DE
Sbjct: 469 NKRIGGYDVKMEWGQAKGL--QPYSKFWDESFGCAYIPCD-LVNEQELSSLLEGSIIDEV 525
Query: 276 TVPLWL 281
T+P+ L
Sbjct: 526 TLPVGL 531
>gi|326514832|dbj|BAJ99777.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1070
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 82/159 (51%), Gaps = 26/159 (16%)
Query: 2 DVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVP 61
+V F +L +L DTKP ISK K+ I A+R K+YKHVV VE FI KC E+K+
Sbjct: 68 NVASEFKAKLDALLDTKPSISKEKMNQIVNEAVRCAKYYKHVVYYVESFIKKCPREFKIS 127
Query: 62 ALYVIDSLVRQSRHQFQD-------------------------KDVFGPRFARNLKATFQ 96
LY++D+++R ++ KD++ RFA N+ TF
Sbjct: 128 GLYILDAIIRNTKSSSSPSSSNKNEGGKNGEKKSASKNATAKIKDLYNKRFAINICKTFT 187
Query: 97 HLYQCPPE-DKSKIIRVLNLWQKNEVFTPDIIHPLFDMA 134
+L+ + ++ K+ +VL LWQK +V + + LF ++
Sbjct: 188 NLFSKANKIEREKVNKVLKLWQKYKVLDVETMDKLFRIS 226
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 79/157 (50%), Gaps = 35/157 (22%)
Query: 156 MCSTTLWIGHLSKLVQEEELSDTFGEYGD---------------------------VVSI 188
+CS T+W+GHLSK EE L + + VV +
Sbjct: 501 ICSKTIWLGHLSKTTTEEMLVNEITNIIEHSSSSSSSKRSKSSSSSSKNNNESRKVVVDV 560
Query: 189 NLIPPRGCAFVCMNRRQDAAKALYKLKNT-KLQGKTITLAWAPGKGM-KDKDWKDFWEVQ 246
NLIPPRGCAFV + R+ AAK + ++K +L I +AWA KG+ +D+ K W V+
Sbjct: 561 NLIPPRGCAFVELVDRKMAAKCIDRMKEGYRLDASQIKVAWATNKGINQDRRIKQHWNVE 620
Query: 247 DGVSYIPYDRLSKEIDYDYLE-----DGGVFDEDTVP 278
G +YIP+ + + D LE +GG+ DED++P
Sbjct: 621 IGCTYIPWSDV-EAYSRDNLEFLKWVEGGILDEDSLP 656
>gi|299471863|emb|CBN77033.1| Chain A, Snapshots Of The Rna Processing Factor Scaf8 Bound To
Different Phosphorylated Forms Of The Carboxy-Terminal
Domain Of Rna-Polymerase Ii pdb|3D9I|B Chain B,
Snapshots Of The Rna Processing Fa (Partial) [Ectocarpus
siliculosus]
Length = 270
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 71/121 (58%)
Query: 2 DVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVP 61
D + ++ L L + PIS +++ A+ +K YK VV ++E++I K +P++++
Sbjct: 7 DGAASMHKALKVLATSSRPISASRVKTAAARALDNVKEYKRVVHAIERYIRKAQPQHRIG 66
Query: 62 ALYVIDSLVRQSRHQFQDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEV 121
+VIDS+ RQ++ ++ KDVF PRFA+ + T ++L P DK + RV+ W + +
Sbjct: 67 GCFVIDSVCRQAQSKWGHKDVFTPRFAQRMSETVENLRNVPDGDKPPVFRVIREWHEKGM 126
Query: 122 F 122
F
Sbjct: 127 F 127
>gi|119568081|gb|EAW47696.1| RNA binding motif protein 16, isoform CRA_a [Homo sapiens]
Length = 766
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 64/92 (69%), Gaps = 4/92 (4%)
Query: 188 INLIPPRGCAFVCMNRRQDAAKALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEV 245
+ +IPPRGCA+VCM RQDA +AL KL + K+ K I +AWA KG+K ++K FW+V
Sbjct: 1 MQMIPPRGCAYVCMVHRQDAFRALQKLSSGSYKIGSKVIKIAWALNKGVK-TEYKQFWDV 59
Query: 246 QDGVSYIPYDRLSKEIDYDYLEDGGVFDEDTV 277
GV+YIP++++ K D + +GG+ D++TV
Sbjct: 60 DLGVTYIPWEKV-KVDDLEGFAEGGMIDQETV 90
>gi|26335087|dbj|BAC31244.1| unnamed protein product [Mus musculus]
Length = 105
Score = 80.9 bits (198), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/53 (75%), Positives = 46/53 (86%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIK 53
M+ +KTFN EL SL D KPPISKAK+T IT++AI+AIKFYKHVVQSVEKFI K
Sbjct: 1 MEAVKTFNSELYSLNDYKPPISKAKMTQITKAAIKAIKFYKHVVQSVEKFIQK 53
>gi|241614962|ref|XP_002406699.1| hypothetical protein IscW_ISCW007320 [Ixodes scapularis]
gi|215500854|gb|EEC10348.1| hypothetical protein IscW_ISCW007320 [Ixodes scapularis]
Length = 183
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/53 (64%), Positives = 44/53 (83%)
Query: 226 LAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDEDTVP 278
+AWAPGKG+K K+ KDFWEV GVSYIPY++L K++D LE+GGV DED++P
Sbjct: 1 MAWAPGKGVKSKELKDFWEVDLGVSYIPYEKLPKDVDLVSLEEGGVIDEDSLP 53
>gi|301119879|ref|XP_002907667.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106179|gb|EEY64231.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 677
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 64/110 (58%)
Query: 21 ISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRHQFQDK 80
+S+++I+A+ + A KFYKHVV +E F+ K + E+++ LY +D+++RQS + K
Sbjct: 38 VSQSRISAVAKLAAHYSKFYKHVVHDIEVFLWKAEVEHRLAGLYAVDAIIRQSHTKNGSK 97
Query: 81 DVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHPL 130
D + RF + T + + P + + K+ V+ WQK ++TP I L
Sbjct: 98 DAYVKRFLIRMSDTIAAVKKVPEQFQPKVKHVIEEWQKRAIYTPRQIEDL 147
>gi|301092054|ref|XP_002896200.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262094881|gb|EEY52933.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 693
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 64/110 (58%)
Query: 21 ISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRHQFQDK 80
+S+++I+A+ + A KFYKHVV +E F+ K + E+++ LY +D+++RQS + K
Sbjct: 38 VSQSRISAVAKLAAHYSKFYKHVVHDIEVFLWKAEVEHRLAGLYAVDAIIRQSHTKNGSK 97
Query: 81 DVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHPL 130
D + RF + T + + P + + K+ V+ WQK ++TP I L
Sbjct: 98 DAYVKRFLIRMSDTIAAVKKVPEQFQPKVKHVIEEWQKRAIYTPRQIEDL 147
>gi|348690038|gb|EGZ29852.1| hypothetical protein PHYSODRAFT_310030 [Phytophthora sojae]
Length = 658
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Query: 7 FNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVI 66
Q L L K +S+++I A+ + A KFYKHVV +E F+ K + E+++ LY I
Sbjct: 20 LKQALEGLATAKG-VSQSRIGAVAKLAAHYSKFYKHVVHDIEVFLWKAEVEHRLAGLYAI 78
Query: 67 DSLVRQSRHQFQDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDI 126
D+++RQ+ + KD + RF L T + + P + + K+ V+ WQK ++TP
Sbjct: 79 DAIIRQAHAKNDPKDAYVKRFLIRLSDTIAAVKKVPEQSQPKVRHVIEEWQKRGIYTPKQ 138
Query: 127 I 127
I
Sbjct: 139 I 139
>gi|170596593|ref|XP_001902823.1| Conserved hypothetical protein [Brugia malayi]
gi|158589262|gb|EDP28328.1| Conserved hypothetical protein, putative [Brugia malayi]
Length = 412
Score = 74.7 bits (182), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 68/127 (53%), Gaps = 3/127 (2%)
Query: 156 MCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL- 214
+ S TLW+G + E E+ E G+ I++I R CA+V M R+ A + + ++
Sbjct: 179 IASCTLWLGRIPSNCAESEIRQAVAEAGEPARISIIHSRACAYVTMKDRKAAFRVMDRMQ 238
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDE 274
KN K+ K + L W G+G+K + + ++W+ G S IP+ L D + L +GG +
Sbjct: 239 KNFKIGEKNVKLNWGIGQGLKGERYAEYWDSDRGYSLIPHYALPS--DLESLIEGGHLEV 296
Query: 275 DTVPLWL 281
+++P L
Sbjct: 297 ESLPAHL 303
>gi|402585423|gb|EJW79363.1| hypothetical protein WUBG_09726 [Wuchereria bancrofti]
Length = 469
Score = 74.3 bits (181), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 68/127 (53%), Gaps = 3/127 (2%)
Query: 156 MCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL- 214
+ S TLW+G + E E+ E G+ I++I R CA+V M R+ A + + ++
Sbjct: 236 IASCTLWLGRIPSNCAENEIRQAVAEAGEPARISIIHSRACAYVTMKDRKAAFRVMDRMQ 295
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDE 274
KN K+ K + L W G+G+K + + ++W+ G S IP+ L D + L +GG +
Sbjct: 296 KNFKIGEKNVKLNWGIGQGLKGERYAEYWDPDRGYSLIPHYALPS--DLESLIEGGHLEV 353
Query: 275 DTVPLWL 281
+++P L
Sbjct: 354 ESLPAHL 360
>gi|148669460|gb|EDL01407.1| mCG140587 [Mus musculus]
Length = 277
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Query: 195 GCAFVCMNRRQDAAKALYKLKNT--KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYI 252
GCA+VCM RQD+ AL KL + K+ K I +AWA KG+K ++K FW+V GV+YI
Sbjct: 4 GCAYVCMVHRQDSFPALQKLSSGSYKIGSKAIKIAWALNKGVK-TEYKQFWDVDLGVTYI 62
Query: 253 PYDRLSKEIDYDYLEDGGVFDEDTV 277
P++++ K D D +G + D++TV
Sbjct: 63 PWEKV-KVDDLDGFAEGSMIDQETV 86
>gi|449446975|ref|XP_004141245.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449498692|ref|XP_004160607.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 426
Score = 67.0 bits (162), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 55/95 (57%), Gaps = 2/95 (2%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
+TT+++G L V +E+L F +YG++VS+ + +GC FV R DA +AL KL
Sbjct: 290 ANTTIFVGGLDPNVTDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNDAEEALQKLNG 349
Query: 217 TKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSY 251
T + +T+ L+W G+ +K ++DF +G Y
Sbjct: 350 TVIGKQTVRLSW--GRNPANKQFRDFGNQWNGAYY 382
>gi|302794528|ref|XP_002979028.1| hypothetical protein SELMODRAFT_418663 [Selaginella moellendorffii]
gi|302806386|ref|XP_002984943.1| hypothetical protein SELMODRAFT_424039 [Selaginella moellendorffii]
gi|300147529|gb|EFJ14193.1| hypothetical protein SELMODRAFT_424039 [Selaginella moellendorffii]
gi|300153346|gb|EFJ19985.1| hypothetical protein SELMODRAFT_418663 [Selaginella moellendorffii]
Length = 408
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 44/71 (61%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTK 218
TT+++G L V EEEL TFGE+G++V + + P +GC FV R A +AL KL T
Sbjct: 226 TTIFVGGLDPAVSEEELQKTFGEFGELVYVKIPPGKGCGFVQFTHRSCAEEALGKLHGTM 285
Query: 219 LQGKTITLAWA 229
++ + I L+W
Sbjct: 286 IRQQAIRLSWG 296
>gi|449300701|gb|EMC96713.1| hypothetical protein BAUCODRAFT_486997 [Baudoinia compniacensis
UAMH 10762]
Length = 758
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 75/144 (52%), Gaps = 17/144 (11%)
Query: 2 DVIKTFNQELSSLYDTKPP-ISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKV 60
++I +Q+L+SL KPP SK KI++IT+ + I +VQS+ + K +K+
Sbjct: 3 NIITELDQQLASLNQLKPPGASKGKISSITQLCVSNIHAEMTIVQSLYRAFKKAPATHKL 62
Query: 61 PALYVIDSLVRQ----SRHQFQDKDVFG-----------PRFARNLKATFQHLYQCPPED 105
A+YVIDS+VRQ ++ QD ++ G R L A F + + PED
Sbjct: 63 GAMYVIDSVVRQWIEKAKQNGQDLNIEGRGEPGTYPAAVKRVTELLPAFFDDIMKGIPED 122
Query: 106 -KSKIIRVLNLWQKNEVFTPDIIH 128
K K+ V+++W+K F +++
Sbjct: 123 QKPKLANVISIWEKGNTFPSKVLN 146
>gi|75334880|sp|Q9LEB4.1|RBP45_NICPL RecName: Full=Polyadenylate-binding protein RBP45;
Short=Poly(A)-binding protein RBP45; AltName:
Full=RNA-binding protein 45; Short=NplRBP45
gi|9663767|emb|CAC01237.1| RNA Binding Protein 45 [Nicotiana plumbaginifolia]
Length = 409
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 62/137 (45%), Gaps = 5/137 (3%)
Query: 105 DKSKIIRVLNLWQKNEVFT---PDIIHPLFDMADPNHPIHRELAEIQARNGVENMCSTTL 161
D+S+ +R + + N V P I P + P QA G + +TT+
Sbjct: 227 DESEQLRAMT--EMNGVLCSTRPMRIGPAANKKPVGTPQKATYQNPQATQGESDPNNTTI 284
Query: 162 WIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKLQG 221
++G L V EE L F YG++V + ++ + C FV R A +AL L T+L G
Sbjct: 285 FVGGLDPTVAEEHLRQVFSPYGELVHVKIVAGKRCGFVQFGTRASAEQALSSLNGTQLGG 344
Query: 222 KTITLAWAPGKGMKDKD 238
++I L+W K D
Sbjct: 345 QSIRLSWGRSPSSKQTD 361
>gi|156386796|ref|XP_001634097.1| predicted protein [Nematostella vectensis]
gi|156221176|gb|EDO42034.1| predicted protein [Nematostella vectensis]
Length = 57
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 41/57 (71%)
Query: 226 LAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDEDTVPLWLK 282
LAWAP KG+KD+++K+F+ V GV+YIP+D+L D + L +GG D +++P LK
Sbjct: 1 LAWAPAKGVKDREYKEFFNVSIGVTYIPHDKLGASPDLESLGEGGWIDPESIPEHLK 57
>gi|350536139|ref|NP_001234487.1| DNA-binding protein [Solanum lycopersicum]
gi|40804404|gb|AAR91698.1| DNA-binding protein [Solanum lycopersicum]
Length = 428
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 8/94 (8%)
Query: 144 LAEIQARNGV--------ENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG 195
LA A NG ++ +TT+++G L V +EEL +F ++G+VVS+ + +G
Sbjct: 273 LAGGHASNGAATQTSQTDSDLSNTTVFVGGLDSEVTDEELRQSFSQFGNVVSVKIPAGKG 332
Query: 196 CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
C FV + R A A+ KL T + +T+ L+W
Sbjct: 333 CGFVQFSERSAAEDAIEKLNGTVIGAQTVRLSWG 366
>gi|356562301|ref|XP_003549410.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 401
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 151 NGVENMC-----STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQ 205
NG N +TT+++G L V +E+L F +YG++VS+ + +GC FV R
Sbjct: 258 NGTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRN 317
Query: 206 DAAKALYKLKNTKLQGKTITLAWAPGKGMKDKDWK-DFWEVQDGVSY 251
+A +AL KL T + +T+ L+W G+ +K ++ DF G Y
Sbjct: 318 NAEEALQKLNGTTIGKQTVRLSW--GRNPANKQFRMDFGSPWTGAYY 362
>gi|356552180|ref|XP_003544447.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 425
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 57/107 (53%), Gaps = 8/107 (7%)
Query: 151 NGVENMC-----STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQ 205
NG N +TT+++G L V +E+L F +YG++VS+ + +GC FV R
Sbjct: 282 NGTANQSEADSTNTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRN 341
Query: 206 DAAKALYKLKNTKLQGKTITLAWAPGKGMKDKDWK-DFWEVQDGVSY 251
+A +AL KL T + +T+ L+W G+ +K ++ DF G Y
Sbjct: 342 NAEEALQKLNGTSIGKQTVRLSW--GRNPANKQFRMDFGNPWTGAYY 386
>gi|358056882|dbj|GAA97232.1| hypothetical protein E5Q_03908 [Mixia osmundae IAM 14324]
Length = 683
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 60/108 (55%), Gaps = 4/108 (3%)
Query: 151 NGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKA 210
N + +TT+++G L + EE L + F +GD+ + + P +GC FV RRQDA A
Sbjct: 377 NNANDPNNTTVFVGGLPACISEETLRNFFQHFGDITYVKIPPNKGCGFVQFVRRQDAELA 436
Query: 211 LYKLKNTKLQGKT-ITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRL 257
+ K+ + + GK+ I L+W G+ DK + ++ + + IP++ +
Sbjct: 437 ILKMHDFPIHGKSRIRLSW--GRSQGDKQVEHVKKLANALG-IPFESV 481
>gi|255538402|ref|XP_002510266.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223550967|gb|EEF52453.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 443
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 54/107 (50%)
Query: 145 AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRR 204
A QA + +TT+++G L V +E+L F +YG++VS+ + +GC FV R
Sbjct: 298 ASGQAFQADGDSTNTTIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVGKGCGFVQFASR 357
Query: 205 QDAAKALYKLKNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSY 251
+A +AL KL T + +T+ L+W K + DF G Y
Sbjct: 358 SNAEEALQKLNGTVIGKQTVRLSWGRNPANKQQLRSDFGNQWGGAYY 404
>gi|224105517|ref|XP_002313840.1| predicted protein [Populus trichocarpa]
gi|222850248|gb|EEE87795.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 58/104 (55%), Gaps = 4/104 (3%)
Query: 137 NHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGC 196
H + +A+ +G N +TT+++G + V +E+L F ++G+VVS+ + +GC
Sbjct: 271 GHASNGTMAQGSQSDGDSN--NTTIFVGGIDSDVTDEDLRQPFSQFGEVVSVKMPTGKGC 328
Query: 197 AFVCMNRRQDAAKALYKLKNTKLQGKTITLAWAPGKGMKDKDWK 240
AFV R++A AL L T + +T+ L+W G+ +K W+
Sbjct: 329 AFVQFANRKNAEDALQSLNGTTIGKQTVRLSW--GRTPANKQWR 370
>gi|224067280|ref|XP_002302445.1| predicted protein [Populus trichocarpa]
gi|222844171|gb|EEE81718.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 61.2 bits (147), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 56/111 (50%), Gaps = 12/111 (10%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
+ T+++G L V +E+L F +YG++VS+ + +GC FV R +A +AL KL
Sbjct: 297 SNATIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVSKGCGFVQFANRNNAEEALQKLNG 356
Query: 217 TKLQGKTITLAWA--PGKGMKDKDWKDFW-------EVQDGVSYI---PYD 255
T + +T+ L+W PG D+ W +V DG Y P+D
Sbjct: 357 TVIGKQTVRLSWGRNPGHKQHRADFSSPWNGAYYGGQVYDGYGYALPPPHD 407
>gi|449455232|ref|XP_004145357.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 436
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 141 HRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVC 200
H +Q +TT+++G L V +E+L F ++GDVVS+ + +GC FV
Sbjct: 292 HPNGMAVQGSQSDSESNNTTIFVGGLDSDVSDEDLKQAFSKFGDVVSVKIPIGKGCGFVQ 351
Query: 201 MNRRQDAAKALYKLKNTKLQGKTITLAWAPGKGMKDKDWK 240
R++A A+ L T + +T+ L+W G+ +K W+
Sbjct: 352 FANRKNAEDAIQGLNGTVIGKQTVRLSW--GRSTGNKQWR 389
>gi|449523756|ref|XP_004168889.1| PREDICTED: polyadenylate-binding protein RBP47-like [Cucumis
sativus]
Length = 437
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 141 HRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVC 200
H +Q +TT+++G L V +E+L F ++GDVVS+ + +GC FV
Sbjct: 293 HPNGMAVQGSQSDSESNNTTIFVGGLDSDVSDEDLKQAFSKFGDVVSVKIPIGKGCGFVQ 352
Query: 201 MNRRQDAAKALYKLKNTKLQGKTITLAWAPGKGMKDKDWK 240
R++A A+ L T + +T+ L+W G+ +K W+
Sbjct: 353 FANRKNAEDAIQGLNGTVIGKQTVRLSW--GRSTGNKQWR 390
>gi|388494114|gb|AFK35123.1| unknown [Medicago truncatula]
Length = 425
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
+TT+++G L V +E+L TF +YG++ S+ + +GC FV R +A +AL KL
Sbjct: 293 TNTTIFVGGLDSNVTDEDLKQTFSQYGEIASVKIPVGKGCGFVQFANRNNAEEALQKLNG 352
Query: 217 TKLQGKTITLAWA 229
T + +T+ L+W
Sbjct: 353 TMIGKQTVRLSWG 365
>gi|224123466|ref|XP_002330321.1| predicted protein [Populus trichocarpa]
gi|222871356|gb|EEF08487.1| predicted protein [Populus trichocarpa]
Length = 397
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 58/104 (55%), Gaps = 4/104 (3%)
Query: 137 NHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGC 196
H + +A+ +G N +TT+++G + V +E+L F ++G+VVS+ + +GC
Sbjct: 256 GHASNGAMAQGSQSDGDSN--NTTIFVGGIDSDVTDEDLRQPFSQFGEVVSVKIPVGKGC 313
Query: 197 AFVCMNRRQDAAKALYKLKNTKLQGKTITLAWAPGKGMKDKDWK 240
AFV R++A AL L T + +T+ L+W G+ +K W+
Sbjct: 314 AFVQFANRKNAEDALQSLNGTTIGKQTVRLSW--GRTPANKQWR 355
>gi|359492062|ref|XP_002284337.2| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 409
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 12/110 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V +E+L F +YG++VS+ + +GC FV R +A AL KL T
Sbjct: 278 NTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGT 337
Query: 218 KLQGKTITLAWA--PGKGMKDKDWKDFW-------EVQDGVSYI---PYD 255
+ +T+ L+W P D+ + W +V DG Y P+D
Sbjct: 338 VIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYGGQVYDGYGYALPPPHD 387
>gi|302142363|emb|CBI19566.3| unnamed protein product [Vitis vinifera]
Length = 324
Score = 60.5 bits (145), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 12/110 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V +E+L F +YG++VS+ + +GC FV R +A AL KL T
Sbjct: 193 NTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGT 252
Query: 218 KLQGKTITLAWA--PGKGMKDKDWKDFW-------EVQDGVSYI---PYD 255
+ +T+ L+W P D+ + W +V DG Y P+D
Sbjct: 253 VIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYGGQVYDGYGYALPPPHD 302
>gi|356510359|ref|XP_003523906.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 409
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 12/111 (10%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
+TT+++G L V E+L F +YG++VS+ + +GC FV R +A +AL KL
Sbjct: 276 TNTTIFVGGLDPNVTAEDLKQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNG 335
Query: 217 TKLQGKTITLAW--APGKGMKDKDWKDFWE-------VQDGVSYI---PYD 255
T + + + L+W +P D+ + W V DG Y PYD
Sbjct: 336 TTIGKQMVRLSWGRSPANKQFRADFGNAWSGAYYGGPVYDGYGYALPPPYD 386
>gi|223973753|gb|ACN31064.1| unknown [Zea mays]
Length = 359
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
++ L++G L + V E+L F YG++V + +P +GC FV + R A +A+ L +
Sbjct: 247 NSRLFVGQLDQSVTSEDLMQAFSPYGELVDVKALPGKGCGFVTYSNRASAEEAIRMLNGS 306
Query: 218 KLQGKTITLAWA 229
+L GK I L+W
Sbjct: 307 QLGGKAIKLSWG 318
>gi|359492060|ref|XP_003634360.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 418
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 12/110 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V +E+L F +YG++VS+ + +GC FV R +A AL KL T
Sbjct: 287 NTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGT 346
Query: 218 KLQGKTITLAWA--PGKGMKDKDWKDFW-------EVQDGVSYI---PYD 255
+ +T+ L+W P D+ + W +V DG Y P+D
Sbjct: 347 VIGKQTVRLSWGRNPANKQMRADFGNQWSGAYYGGQVYDGYGYALPPPHD 396
>gi|224284226|gb|ACN39849.1| unknown [Picea sitchensis]
Length = 429
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++ +TT+++G L +E+L FG+YG++VS+ + +GC FV R A +AL +L
Sbjct: 292 DLNNTTIFVGRLDPNATDEDLRQVFGQYGELVSVKIPVGKGCGFVQFGNRASAEEALQRL 351
Query: 215 KNTKLQGKTITLAWA 229
T ++ +T+ L+W
Sbjct: 352 HGTVIRQQTVRLSWG 366
>gi|224286528|gb|ACN40970.1| unknown [Picea sitchensis]
Length = 430
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 46/75 (61%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++ +TT+++G L +E+L FG+YG++VS+ + +GC FV R A +AL +L
Sbjct: 293 DLNNTTIFVGRLDPNATDEDLRQVFGQYGELVSVKIPVGKGCGFVQFGNRASAEEALQRL 352
Query: 215 KNTKLQGKTITLAWA 229
T ++ +T+ L+W
Sbjct: 353 HGTVIRQQTVRLSWG 367
>gi|225428741|ref|XP_002285031.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 416
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 10/106 (9%)
Query: 144 LAEIQARNGV--------ENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG 195
LA A NG + +TT+++G L V +E+L +F ++G+VVS+ + +G
Sbjct: 272 LAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKG 331
Query: 196 CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWAPGKGMKDKDWKD 241
C FV R A AL +L T + +T+ L+W G+ K W++
Sbjct: 332 CGFVQFANRNSAEDALQRLNGTVIGKQTVRLSW--GRNPASKQWRN 375
>gi|325180724|emb|CCA15131.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 629
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%)
Query: 21 ISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRHQFQDK 80
S ++ A+ A++ K YK VV VE FI K ++++ LY +D+++RQSR + K
Sbjct: 32 TSANRVKAVASVALQYAKNYKDVVHDVEAFIWKTDKKHRLAGLYSMDAIMRQSRSKHGTK 91
Query: 81 DVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQ 117
D + RF L T + + + P E + + V+ W+
Sbjct: 92 DAYVERFGERLATTIRAIREIPVEFRRNVRNVVREWE 128
>gi|147781769|emb|CAN74486.1| hypothetical protein VITISV_029928 [Vitis vinifera]
Length = 434
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
Query: 145 AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRR 204
A Q + +TT+++G L V +E+L +F ++G+VVS+ + +GC FV R
Sbjct: 299 AVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKGCGFVQFANR 358
Query: 205 QDAAKALYKLKNTKLQGKTITLAWAPGKGMKDKDWKD 241
A AL +L T + +T+ L+W G+ K W++
Sbjct: 359 NSAEDALQRLNGTVIGKQTVRLSW--GRNPASKQWRN 393
>gi|82621116|gb|ABB86246.1| DNA-binding protein-like [Solanum tuberosum]
Length = 423
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%)
Query: 145 AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRR 204
A Q ++ +TT+++G L V +EEL +F ++G+VVS+ + +GC FV + R
Sbjct: 277 AATQTSQTDSDLSNTTVFVGGLDSDVTDEELRQSFSQFGNVVSVKIPAGKGCGFVQFSER 336
Query: 205 QDAAKALYKLKNTKLQGKTITLAWA 229
A A+ KL T + +T+ L+W
Sbjct: 337 SAAEDAIEKLNGTVIGTQTVRLSWG 361
>gi|15220233|ref|NP_175180.1| RNA-binding protein 47C [Arabidopsis thaliana]
gi|75337807|sp|Q9SX79.1|RB47C_ARATH RecName: Full=Polyadenylate-binding protein RBP47C;
Short=Poly(A)-binding protein RBP47C; AltName:
Full=RNA-binding protein 47C; Short=AtRBP47C
gi|5668812|gb|AAD46038.1|AC007519_23 Contains 3 PF|00076 RNA recognition motif domains. ESTs gb|R30092,
gb|R30093, gb|AA394338, gb|N65719 and gb|AA597577 come
from this gene [Arabidopsis thaliana]
gi|12744993|gb|AAK06876.1|AF344325_1 putative DNA binding protein [Arabidopsis thaliana]
gi|14334552|gb|AAK59684.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17065624|gb|AAL33806.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332194053|gb|AEE32174.1| RNA-binding protein 47C [Arabidopsis thaliana]
Length = 432
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 54/92 (58%), Gaps = 2/92 (2%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++ +TT+++G L V +E+L F E+G++VS+ + +GC FV R +A +AL KL
Sbjct: 300 DIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKL 359
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQ 246
T + +T+ L+W G+ +K +D + Q
Sbjct: 360 NGTVIGKQTVRLSW--GRNPANKQPRDKYGNQ 389
>gi|224137382|ref|XP_002327112.1| predicted protein [Populus trichocarpa]
gi|222835427|gb|EEE73862.1| predicted protein [Populus trichocarpa]
Length = 429
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 55/95 (57%), Gaps = 3/95 (3%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V +E+L F +YG++VS+ + +GC FV R +A +AL KL T
Sbjct: 295 NTTIFVGGLDPNVTDEDLKQPFSQYGEIVSVKIPVGKGCGFVQFANRDNAEEALQKLNGT 354
Query: 218 KLQGKTITLAWAPGKGMKDKDWK-DFWEVQDGVSY 251
+ +T+ L+W G+ +K ++ DF +G Y
Sbjct: 355 VIGKQTVRLSW--GRNPANKQFRADFGSPWNGAYY 387
>gi|297741313|emb|CBI32444.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 10/106 (9%)
Query: 144 LAEIQARNGV--------ENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG 195
LA A NG + +TT+++G L V +E+L +F ++G+VVS+ + +G
Sbjct: 198 LAGGNASNGAVAQGSQANGDSTNTTIFVGGLDSEVTDEDLRQSFSQFGEVVSVKIPVGKG 257
Query: 196 CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWAPGKGMKDKDWKD 241
C FV R A AL +L T + +T+ L+W G+ K W++
Sbjct: 258 CGFVQFANRNSAEDALQRLNGTVIGKQTVRLSW--GRNPASKQWRN 301
>gi|302795494|ref|XP_002979510.1| hypothetical protein SELMODRAFT_111082 [Selaginella moellendorffii]
gi|300152758|gb|EFJ19399.1| hypothetical protein SELMODRAFT_111082 [Selaginella moellendorffii]
Length = 432
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
+TT+++G L + EEE+ TF G++VS+ + P +GCAFV +R A AL +L
Sbjct: 246 TNTTIFVGGLDLNITEEEVKQTFSHIGELVSVKIPPGKGCAFVQYAQRNSAEDALQRLHG 305
Query: 217 TKLQGKTITLAWA----PGKGMKDKDWKDFWEVQ 246
T + + I L+W K W+D + Q
Sbjct: 306 TVIGQQAIRLSWGRSPTSTKQAPTSPWRDAAQTQ 339
>gi|88603697|ref|YP_503875.1| RNA recognition motif-containing protein [Methanospirillum hungatei
JF-1]
gi|88189159|gb|ABD42156.1| RNA-binding region RNP-1 (RNA recognition motif) [Methanospirillum
hungatei JF-1]
Length = 105
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 45/74 (60%)
Query: 156 MCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLK 215
M L++G+L+ V+E++L D F +YGDVVS+ +I +G FV M ++A A+ L
Sbjct: 1 MEGKRLYVGNLTYSVKEDQLKDLFSQYGDVVSVKIIEQKGFGFVEMGTSEEAQAAMDALN 60
Query: 216 NTKLQGKTITLAWA 229
T +G+T+ + A
Sbjct: 61 QTVFEGRTMRIDEA 74
>gi|255555523|ref|XP_002518798.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542179|gb|EEF43723.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 438
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 56/104 (53%), Gaps = 4/104 (3%)
Query: 137 NHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGC 196
H + +A+ +G N +TT+++G + + +E+L F ++G+VVS+ + +GC
Sbjct: 297 GHAPNGSMAQGSQSDGDSN--NTTIFVGGIDSDISDEDLRQPFSQFGEVVSVKIPAGKGC 354
Query: 197 AFVCMNRRQDAAKALYKLKNTKLQGKTITLAWAPGKGMKDKDWK 240
FV R+ A AL L T + +T+ L+W G+ +K W+
Sbjct: 355 GFVQFADRKSAEDALQSLNGTTIGKQTVRLSW--GRSPANKQWR 396
>gi|302792090|ref|XP_002977811.1| hypothetical protein SELMODRAFT_232989 [Selaginella moellendorffii]
gi|300154514|gb|EFJ21149.1| hypothetical protein SELMODRAFT_232989 [Selaginella moellendorffii]
Length = 455
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
+TT+++G L + EEE+ TF + G++VS+ + P +GCAFV +R A AL +L
Sbjct: 264 TNTTIFVGGLDLNITEEEVKQTFSQIGELVSVKIPPGKGCAFVQYAQRNSAEDALQRLHG 323
Query: 217 TKLQGKTITLAWA 229
T + + I L+W
Sbjct: 324 TVIGQQAIRLSWG 336
>gi|302841234|ref|XP_002952162.1| hypothetical protein VOLCADRAFT_32547 [Volvox carteri f.
nagariensis]
gi|300262427|gb|EFJ46633.1| hypothetical protein VOLCADRAFT_32547 [Volvox carteri f.
nagariensis]
Length = 193
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TTL+IG LS V E++L FG YG+++ + P +GC FV RQ A A+ ++
Sbjct: 120 NTTLFIGGLSSGVTEDQLRGVFGRYGEIIYTKIPPGKGCGFVQFIDRQAAEYAMQEVNGQ 179
Query: 218 KLQGKTITLAWA 229
+ G ++ ++W
Sbjct: 180 IIGGSSVRISWG 191
>gi|449470045|ref|XP_004152729.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
gi|449496017|ref|XP_004160013.1| PREDICTED: polyadenylate-binding protein RBP47C-like [Cucumis
sativus]
Length = 429
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 52/92 (56%), Gaps = 2/92 (2%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
+ +TT++IG L V +E+L F ++G++VS+ + +GC F+ R++A +AL KL
Sbjct: 294 DFTNTTIFIGGLDPNVTDEDLKQLFSQHGEIVSVKIPVGKGCGFIQFANRKNAEEALQKL 353
Query: 215 KNTKLQGKTITLAW--APGKGMKDKDWKDFWE 244
T + +T+ L+W +P D+ + W
Sbjct: 354 NGTVIGKQTVRLSWGRSPTNKQYRGDYGNHWS 385
>gi|168027976|ref|XP_001766505.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682414|gb|EDQ68833.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 474
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 142 RELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCM 201
++ E+ + E+M TL++G L V EE+L D F YG++ SI ++P R CAFV
Sbjct: 211 KKAGEMPSLMAPEDMSIKTLYVGGLVDRVTEEDLKDQFYGYGEIESIRMVPQRACAFVTY 270
Query: 202 NRRQDAAKALYKLKNT-KLQGKTITLAWA 229
R+ A KA L N + G + L W
Sbjct: 271 TTREGAEKAADHLANKLVINGLRLKLMWG 299
>gi|187097098|ref|NP_001119609.1| sex-lethal [Acyrthosiphon pisum]
gi|98986311|tpe|CAJ55783.1| TPA: sex-lethal [Acyrthosiphon pisum]
gi|239792967|dbj|BAH72757.1| ACYPI000005 [Acyrthosiphon pisum]
Length = 205
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 27/131 (20%)
Query: 103 PEDKSKIIRVLNLWQKNEVFTPDIIHPLFDMADPNHPIHRELAEIQARNGVENMCSTTLW 162
PED SK I V+N Q ++ L AR E++ T L+
Sbjct: 60 PEDASKAIEVMNGLQVE---------------------NKRLKVSYARPAGEDIKDTNLY 98
Query: 163 IGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMNRRQDAAKALYKLKN 216
+ +L + + E EL D F YG +V N++ PRG AFV N+++DA KA+ +L
Sbjct: 99 VQNLPRSITERELEDLFAPYGQIVQKNILKDKYSGLPRGVAFVRYNKKEDAQKAIIQLNG 158
Query: 217 TKLQGKTITLA 227
L+G T L+
Sbjct: 159 VLLEGCTEHLS 169
>gi|162312303|ref|NP_596601.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe
972h-]
gi|26401571|sp|O60176.2|YG41_SCHPO RecName: Full=Uncharacterized RNA-binding protein C23E6.01c
gi|157310462|emb|CAB83010.2| mRNA processing factor (predicted) [Schizosaccharomyces pombe]
Length = 473
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 42/73 (57%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
++T+++G LSK V EEEL F +G++V + + P +GC FV RQ A A+ +L+
Sbjct: 301 ANSTVFVGGLSKFVSEEELKYLFQNFGEIVYVKIPPGKGCGFVQFVNRQSAEIAINQLQG 360
Query: 217 TKLQGKTITLAWA 229
L I L+W
Sbjct: 361 YPLGNSRIRLSWG 373
>gi|388505308|gb|AFK40720.1| unknown [Medicago truncatula]
Length = 454
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 56/101 (55%), Gaps = 2/101 (1%)
Query: 141 HRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVC 200
H A Q + +TT+++G L + +E+L F ++GDV+S+ + +GC FV
Sbjct: 316 HSNGAMAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVISVKIPVGKGCGFVQ 375
Query: 201 MNRRQDAAKALYKLKNTKLQGKTITLAWAPGKGMKDKDWKD 241
+ R++A +A+ L T + +T+ L+W G+ +K W++
Sbjct: 376 LADRKNAEEAIQGLNGTVIGKQTVRLSW--GRSPGNKHWRN 414
>gi|307104128|gb|EFN52383.1| hypothetical protein CHLNCDRAFT_138826 [Chlorella variabilis]
Length = 467
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 58/104 (55%), Gaps = 1/104 (0%)
Query: 22 SKAKITAITRSAIRAIKF-YKHVVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRHQFQDK 80
S+ I + A+R K YK V + + + KP Y++ LYV+ +++RQS+ + ++
Sbjct: 22 SRDSIDTLADIAVRDDKMAYKAVCALIVHEMKQLKPAYRLKLLYVMSAILRQSKSRRGER 81
Query: 81 DVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTP 124
D + PRFA L + L P E + +++VL+LW +++F P
Sbjct: 82 DKYAPRFAPLLGSVADLLAPLPGEQLASVLKVLDLWWCDDIFDP 125
>gi|255563907|ref|XP_002522953.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223537765|gb|EEF39383.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 404
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q G + +TT+++G L V +E L FG+YG++V + + + C FV R A
Sbjct: 255 QGTQGENDPNNTTIFVGALDPSVSDEHLRQVFGKYGELVHVKIPAGKRCGFVQFANRACA 314
Query: 208 AKALYKLKNTKLQGKTITLAWA 229
+AL L T+L G++I L+W
Sbjct: 315 EQALLGLNGTQLAGQSIRLSWG 336
>gi|291244948|ref|XP_002742355.1| PREDICTED: hypothetical protein [Saccoglossus kowalevskii]
Length = 922
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 46/70 (65%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTK 218
T+LWIG++ V E+++ + FG+YG + S+ ++P + C FV R+ A+KA+ L+ +
Sbjct: 736 TSLWIGNVLPKVTEKDIREAFGKYGQLQSVRMLPEKFCVFVNYKRKDSASKAMEALQGLE 795
Query: 219 LQGKTITLAW 228
+QG+ I + +
Sbjct: 796 MQGQRILIKF 805
>gi|15220241|ref|NP_175181.1| RNA-binding protein 47C' [Arabidopsis thaliana]
gi|75337808|sp|Q9SX80.1|R47CP_ARATH RecName: Full=Polyadenylate-binding protein RBP47C';
Short=Poly(A)-binding protein RBP47C'; AltName:
Full=RNA-binding protein 47C'; Short=AtRBP47C prime;
Short=AtRBP47C'
gi|5668811|gb|AAD46037.1|AC007519_22 Contains 3 PF|00076 RNA recognition motif domains. EST gb|T20424
comes from this gene [Arabidopsis thaliana]
gi|110743035|dbj|BAE99410.1| hypothetical protein [Arabidopsis thaliana]
gi|124301030|gb|ABN04767.1| At1g47500 [Arabidopsis thaliana]
gi|332194057|gb|AEE32178.1| RNA-binding protein 47C' [Arabidopsis thaliana]
Length = 434
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V +E+L F E+G++VS+ + +GC FV R +A +AL KL T
Sbjct: 305 NTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVKIPVGKGCGFVQFVNRPNAEEALEKLNGT 364
Query: 218 KLQGKTITLAWA 229
+ +T+ L+W
Sbjct: 365 VIGKQTVRLSWG 376
>gi|357465449|ref|XP_003603009.1| RNA-binding protein [Medicago truncatula]
gi|355492057|gb|AES73260.1| RNA-binding protein [Medicago truncatula]
Length = 420
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 54/96 (56%), Gaps = 3/96 (3%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
+TT+++G L E+L F +YG++VS+ + +GC FV R +A +AL KL
Sbjct: 290 TNTTIFVGGLDPSATAEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEEALQKLNG 349
Query: 217 TKLQGKTITLAWAPGKGMKDKDWK-DFWEVQDGVSY 251
T + +T+ L+W G+ +K ++ +F +G +Y
Sbjct: 350 TTVGKQTVRLSW--GRNPANKQFRSEFGSPWNGPAY 383
>gi|331220231|ref|XP_003322791.1| hypothetical protein PGTG_04328 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309301781|gb|EFP78372.1| hypothetical protein PGTG_04328 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 897
Score = 58.5 bits (140), Expect = 3e-06, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 8/130 (6%)
Query: 114 NLWQKNEVFTPDIIHPLFDMADPNHPIHRELAEIQ-----ARNGVENMCSTTLWIGHLSK 168
NL Q+++ P D A + I LA + A + + +TT+++G L
Sbjct: 591 NLTQQHQQLHSAYDLPPIDPASSPNSITSHLAALSQIASVAHDASNDPSNTTVFVGGLPA 650
Query: 169 LVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKLQGKT-ITLA 227
+ E L F +G++ + + P +GC FV RR+DA +A+ K+ + + GK+ I L+
Sbjct: 651 CISEGTLKTFFQNFGEITYVKIPPNKGCGFVQYVRREDAQQAMLKMHDFPIHGKSRIRLS 710
Query: 228 WAPGKGMKDK 237
W G+ + DK
Sbjct: 711 W--GRSLGDK 718
>gi|45184976|ref|NP_982694.1| AAR151Wp [Ashbya gossypii ATCC 10895]
gi|44980597|gb|AAS50518.1| AAR151Wp [Ashbya gossypii ATCC 10895]
Length = 481
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
+ +TT++IG LS ++ E +L F +G+++S+ + P RGC FV R DA A+ +
Sbjct: 322 DTANTTVFIGGLSNMISEGQLHALFMPFGNILSVKVPPGRGCGFVRFENRMDAEAAIQGM 381
Query: 215 KNTKLQGKTITLAWA 229
+ + G I L+W
Sbjct: 382 QGFIVGGNAIRLSWG 396
>gi|374105894|gb|AEY94805.1| FAAR151Wp [Ashbya gossypii FDAG1]
Length = 475
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
+ +TT++IG LS ++ E +L F +G+++S+ + P RGC FV R DA A+ +
Sbjct: 322 DTANTTVFIGGLSNMISEGQLHALFMPFGNILSVKVPPGRGCGFVRFENRMDAEAAIQGM 381
Query: 215 KNTKLQGKTITLAWA 229
+ + G I L+W
Sbjct: 382 QGFIVGGNAIRLSWG 396
>gi|384492924|gb|EIE83415.1| hypothetical protein RO3G_08120 [Rhizopus delemar RA 99-880]
Length = 491
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 47/75 (62%)
Query: 7 FNQELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVI 66
F++EL S+ +TK P+S +KIT++ A K + ++VQ + +FI P+Y++ LYVI
Sbjct: 10 FDKELKSILETKLPVSASKITSLQSLATAHPKHHNYIVQCITRFIENAPPDYRLAGLYVI 69
Query: 67 DSLVRQSRHQFQDKD 81
D++ R Q + ++
Sbjct: 70 DAISRAVHKQLRKRE 84
>gi|290561328|gb|ADD38066.1| Pre-mRNA-splicing factor RBM22 [Lepeophtheirus salmonis]
Length = 362
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYK-LKNT 217
TTL++G L ++ E+++S F +YG++ +I L+P +GCAFV ++R A A K N
Sbjct: 220 TTLYVGGLDDVLDEKDISSHFYQYGEIRNITLVPKQGCAFVQFSKRSSAELAAEKTFNNL 279
Query: 218 KLQGKTITLAWAPGKG 233
+ G+ I + W +G
Sbjct: 280 VIHGRKIIVRWGKSQG 295
>gi|388851881|emb|CCF54475.1| related to NAM8-meiotic recombination protein [Ustilago hordei]
Length = 926
Score = 58.2 bits (139), Expect = 4e-06, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 45/78 (57%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS L+ E+ L F +G++ + + P +GC FV R+QDA A++++
Sbjct: 594 NTTVFVGGLSSLISEQTLRRYFEHFGEITYVKIPPGKGCGFVQYVRKQDAENAIHRMNGF 653
Query: 218 KLQGKTITLAWAPGKGMK 235
+ I L+W +G K
Sbjct: 654 PILNSKIRLSWGRSQGDK 671
>gi|224129262|ref|XP_002320541.1| predicted protein [Populus trichocarpa]
gi|222861314|gb|EEE98856.1| predicted protein [Populus trichocarpa]
Length = 827
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
N S LW+G+LS ++E +L+D F ++GD+ S+ P R AFV N+ +DA A+ L
Sbjct: 4 NPPSRHLWVGNLSHSIEETDLTDEFLQFGDLDSVAFQPGRSYAFVNFNKEEDAIAAIKSL 63
Query: 215 KNTKLQGKTITLAWA 229
+ L G + + +A
Sbjct: 64 QGYPLAGNPLRIEFA 78
>gi|348667370|gb|EGZ07195.1| hypothetical protein PHYSODRAFT_528320 [Phytophthora sojae]
Length = 791
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPP---------RGCAFVCMNRRQDAA 208
+T L++G+L+ V EE L FG YGDV S+ ++ P R C FV R+DA
Sbjct: 209 TTNLYVGNLAPTVTEEVLEKEFGRYGDVYSVKIMWPRSEEERARRRNCGFVSFYERRDAD 268
Query: 209 KALYKLKNTKLQGKTITLAWAPGKGMK 235
A L N +L+G+ I + W GK +K
Sbjct: 269 DARVNLDNKELEGQPIIVGW--GKAVK 293
>gi|384484722|gb|EIE76902.1| hypothetical protein RO3G_01606 [Rhizopus delemar RA 99-880]
Length = 204
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 41/72 (56%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT++IG LS V E+EL FG +GD++++ L P +GC FV R A A+ K+
Sbjct: 74 NTTVFIGGLSSPVTEDELRQYFGSFGDIMNVKLPPGKGCGFVQYTTRISAETAIEKMNGF 133
Query: 218 KLQGKTITLAWA 229
+ I L+W
Sbjct: 134 LIGTSRIRLSWG 145
>gi|388580130|gb|EIM20447.1| RNA-binding domain-containing protein [Wallemia sebi CBS 633.66]
Length = 681
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 46/80 (57%), Gaps = 2/80 (2%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS L+ E+ L F +G + + + P +GC FV R+ DA +A+ +++
Sbjct: 311 NTTVFVGGLSSLISEDTLRVFFAPFGAITYVKIPPGKGCGFVQFVRKADAERAIERMQGF 370
Query: 218 KLQGKTITLAWAPGKGMKDK 237
+ G I L+W G+ DK
Sbjct: 371 PIGGGRIRLSW--GRSQSDK 388
>gi|165935740|gb|ABY75165.1| RNA binding protein [Arachis diogoi]
Length = 142
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 44/73 (60%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
+TT+++G L V +E+L F +YG++VS+ + +GC FV R +A +AL KL
Sbjct: 9 TNTTIFVGGLDPNVTDEDLRQQFSQYGEIVSVKVPVGKGCGFVQFAIRNNAEEALQKLNG 68
Query: 217 TKLQGKTITLAWA 229
T + +T+ L+W
Sbjct: 69 TVIGKQTVRLSWG 81
>gi|4455223|emb|CAB36546.1| putative DNA binding protein [Arabidopsis thaliana]
gi|7269553|emb|CAB79555.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 427
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%)
Query: 147 IQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQD 206
Q +G + +TT+++G + + V E++L FG++G++V + + + C FV R
Sbjct: 266 TQGNSGESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRAC 325
Query: 207 AAKALYKLKNTKLQGKTITLAWA 229
A +AL L T+L G++I L+W
Sbjct: 326 AEQALSVLNGTQLGGQSIRLSWG 348
>gi|449475881|ref|XP_004154577.1| PREDICTED: uncharacterized protein LOC101229209 [Cucumis sativus]
Length = 898
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
N S LW+G+L+ +V E +LS F ++G++ SI P R AFV R +DA A+ +L
Sbjct: 33 NPPSRHLWVGNLAHVVVERDLSRYFSQFGELDSIAFQPSRSYAFVNFKRDEDAMAAMREL 92
Query: 215 KNTKLQGKTI----TLAWAPGKGMKDKDWKDFWE 244
+ L G I T A P +D+D+ E
Sbjct: 93 QGFSLGGNPIKIEFTKADKPSASSRDEDYSQHRE 126
>gi|297846966|ref|XP_002891364.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
gi|297337206|gb|EFH67623.1| ATRBP47C [Arabidopsis lyrata subsp. lyrata]
Length = 443
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V +++L F E+G++VS+ + +GC FV R A +AL KL T
Sbjct: 311 NTTIFVGGLDSSVTDDDLRQPFSEFGEIVSVKIPVGKGCGFVQFVNRPSAEEALEKLNGT 370
Query: 218 KLQGKTITLAWAPGKGMKDKDWKDFWEVQ 246
+ +T+ L+W G+ +K +D + Q
Sbjct: 371 VIGKQTVRLSW--GRNQANKQPRDKYGNQ 397
>gi|210075649|ref|XP_502423.2| YALI0D04917p [Yarrowia lipolytica]
gi|199425763|emb|CAG80611.2| YALI0D04917p [Yarrowia lipolytica CLIB122]
Length = 430
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 50/96 (52%), Gaps = 2/96 (2%)
Query: 136 PNHPIHRELAEIQAR--NGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPP 193
P+H +H+ A N + +TT+++G LS V E+EL F +GD+ + + P
Sbjct: 209 PSHQVHQPFYGGPAHPLNQFTDANNTTVFVGGLSSSVSEDELRQYFQGFGDITYVKIPPG 268
Query: 194 RGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+GC FV +RQ A A+ +++ + + L+W
Sbjct: 269 KGCGFVQYVQRQSAEMAITQMQGYPIGNGRVRLSWG 304
>gi|449444608|ref|XP_004140066.1| PREDICTED: uncharacterized protein LOC101216073 [Cucumis sativus]
Length = 898
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 49/94 (52%), Gaps = 4/94 (4%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
N S LW+G+L+ +V E +LS F ++G++ SI P R AFV R +DA A+ +L
Sbjct: 33 NPPSRHLWVGNLAHVVVERDLSRYFSQFGELDSIAFQPSRSYAFVNFKRDEDAMAAMREL 92
Query: 215 KNTKLQGKTI----TLAWAPGKGMKDKDWKDFWE 244
+ L G I T A P +D+D+ E
Sbjct: 93 QGFSLGGNPIKIEFTKADKPSASSRDEDYSQHRE 126
>gi|18416906|ref|NP_567764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75331668|sp|Q93W34.1|RP45C_ARATH RecName: Full=Polyadenylate-binding protein RBP45C;
Short=Poly(A)-binding protein RBP45C; AltName:
Full=RNA-binding protein 45C; Short=AtRBP45C
gi|13878153|gb|AAK44154.1|AF370339_1 putative DNA binding protein [Arabidopsis thaliana]
gi|15450814|gb|AAK96678.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17104569|gb|AAL34173.1| putative DNA binding protein [Arabidopsis thaliana]
gi|20259888|gb|AAM13291.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332659882|gb|AEE85282.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 415
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 48/83 (57%)
Query: 147 IQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQD 206
Q +G + +TT+++G + + V E++L FG++G++V + + + C FV R
Sbjct: 266 TQGNSGESDPTNTTIFVGAVDQSVTEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRAC 325
Query: 207 AAKALYKLKNTKLQGKTITLAWA 229
A +AL L T+L G++I L+W
Sbjct: 326 AEQALSVLNGTQLGGQSIRLSWG 348
>gi|6226777|sp|O17310.1|SXL_MUSDO RecName: Full=Sex-lethal homolog
gi|2565364|gb|AAB81986.1| Sex-lethal protein [Musca domestica]
Length = 324
Score = 57.4 bits (137), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + ++EL FG+YG++V N++ PRG AFV N
Sbjct: 178 ARPGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFN 237
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G T+ LA GK
Sbjct: 238 KREEAQEAISALNNVIPEGASQPLTVRLAEEHGK 271
>gi|297799290|ref|XP_002867529.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
gi|297313365|gb|EFH43788.1| hypothetical protein ARALYDRAFT_913848 [Arabidopsis lyrata subsp.
lyrata]
Length = 418
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 47/83 (56%)
Query: 147 IQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQD 206
Q G + +TT+++G L + V E++L FG++G++V + + + C FV R
Sbjct: 267 TQGNQGESDPTNTTIFVGALDQSVIEDDLKSVFGQFGELVHVKIPAGKRCGFVQYANRAC 326
Query: 207 AAKALYKLKNTKLQGKTITLAWA 229
A +AL L T+L G++I L+W
Sbjct: 327 AEQALSLLNGTQLGGQSIRLSWG 349
>gi|147856810|emb|CAN81343.1| hypothetical protein VITISV_008697 [Vitis vinifera]
Length = 536
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V +E+L F +YG++VS+ + +GC FV R +A AL KL T
Sbjct: 175 NTTIFVGGLDPNVSDEDLRQPFSQYGEIVSVKIPVGKGCGFVQFANRNNAEDALQKLNGT 234
Query: 218 KLQGKTITLAWA 229
+ +T+ L+W
Sbjct: 235 VIGKQTVRLSWG 246
>gi|156843736|ref|XP_001644934.1| hypothetical protein Kpol_530p46 [Vanderwaltozyma polyspora DSM
70294]
gi|156115587|gb|EDO17076.1| hypothetical protein Kpol_530p46 [Vanderwaltozyma polyspora DSM
70294]
Length = 587
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/117 (24%), Positives = 57/117 (48%), Gaps = 5/117 (4%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAA 208
+++ +N +T++IG LS + E ++ F +G++V++ L P + C FV R DA
Sbjct: 370 SKSNSQNELVSTVFIGGLSPKINESQVRSLFKPFGNIVNVKLPPGKNCGFVKFENRIDAE 429
Query: 209 KALYKLKNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDY 265
A+ L+ + G I L+W M + + V + D+L+ + + +Y
Sbjct: 430 AAIQGLQGFIVAGNPIRLSWGKASSMTSGNASNNHNVNGNI-----DQLNNQNNVNY 481
>gi|443926790|gb|ELU45354.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 886
Score = 57.4 bits (137), Expect = 7e-06, Method: Composition-based stats.
Identities = 52/232 (22%), Positives = 100/232 (43%), Gaps = 19/232 (8%)
Query: 10 ELSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSL 69
E+ LY P+ + TA ++ + ++ ++ ++I + + V D+
Sbjct: 350 EMQGLYCLSRPMRLSHATAKSKPNTGGSGAGYNAIEDLDSYVISRAGAHILST--VPDTY 407
Query: 70 VRQSRHQFQDKDVFGPRF----ARNLKATFQHLYQCPPEDKSKII-----RVLNLWQKNE 120
+ SRH D + PR R+ + L D S+++ RVL +
Sbjct: 408 GQFSRHSISVPDSYAPRMDMAPPRSRSVNAEELLGGLGVDGSRLLGVEGGRVLGMEGSRA 467
Query: 121 VFTPDIIHPLFDMADPNHPIHRELAEIQARNGVENMC---STTLWIGHLSKLVQEEELSD 177
+ +I +++ L +A GV N +TT+++G LS L+ EE L
Sbjct: 468 LLNSEIASRGGGLSE-----GARLESARALLGVLNSADPYNTTVFVGGLSGLIAEETLRG 522
Query: 178 TFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
F +G++ + + P +GC FV R+ DA +A+ +++ + G I L+W
Sbjct: 523 FFAPFGEIHYVKIPPGKGCGFVQFVRKADAERAIERMQGYPIGGGKIRLSWG 574
>gi|30179878|sp|O01671.3|SXL_MEGSC RecName: Full=Sex-lethal homolog
gi|9743624|emb|CAC01696.1| sex-lethal homologue [Megaselia scalaris]
Length = 321
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E + T L++ +LS+ + +E+L FG+YG +V N++ PRG AF+ N
Sbjct: 154 ARPGGEQLRDTNLYVTNLSRSITDEQLETIFGKYGQIVQKNILRDKHTGTPRGVAFIRFN 213
Query: 203 RRQDAAKALYKLKNTKLQGKTITLA 227
+R++A +A+ L N +G T L
Sbjct: 214 KREEAQEAISALNNVIPEGGTQPLT 238
>gi|395644710|ref|ZP_10432570.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM 4140]
gi|395441450|gb|EJG06207.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM 4140]
Length = 86
Score = 57.4 bits (137), Expect = 8e-06, Method: Composition-based stats.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 156 MCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLK 215
M S+TL++G+L+ EE+LS+ F YGDV S +IP +G FV ++A KA+ L
Sbjct: 1 MESSTLYVGNLNYETTEEQLSELFSAYGDVKSARIIPRKGFGFVEFASVEEAEKAMNALN 60
Query: 216 NTKLQGKTITL--AWAP 230
T+ G+T+ + A AP
Sbjct: 61 ETQCMGRTLRIDEARAP 77
>gi|297792959|ref|XP_002864364.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
gi|297310199|gb|EFH40623.1| hypothetical protein ARALYDRAFT_495572 [Arabidopsis lyrata subsp.
lyrata]
Length = 398
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V ++EL FG++G+++ + + P + C FV R A AL L T
Sbjct: 263 NTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANRATAEHALSVLNGT 322
Query: 218 KLQGKTITLAWA 229
+L G++I L+W
Sbjct: 323 QLGGQSIRLSWG 334
>gi|6456838|emb|CAA04179.2| Sex-lethal orthologous protein [Megaselia scalaris]
Length = 307
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E + T L++ +LS+ + +E+L FG+YG +V N++ PRG AF+ N
Sbjct: 140 ARPGGEQLRDTNLYVTNLSRSITDEQLETIFGKYGQIVQKNILRDKHTGTPRGVAFIRFN 199
Query: 203 RRQDAAKALYKLKNTKLQGKT 223
+R++A +A+ L N +G T
Sbjct: 200 KREEAQEAISALNNVIPEGGT 220
>gi|301110582|ref|XP_002904371.1| U2-associated splicing factor, putative [Phytophthora infestans
T30-4]
gi|262096497|gb|EEY54549.1| U2-associated splicing factor, putative [Phytophthora infestans
T30-4]
Length = 907
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG---------CAFVCMNRRQDAA 208
+T L++G+L+ V EE L FG YG+V S+ ++ PR C FV R+DA
Sbjct: 179 TTNLYVGNLAPTVTEEVLQAEFGRYGEVYSVKIMWPRSEEERARKRNCGFVSFYERRDAD 238
Query: 209 KALYKLKNTKLQGKTITLAWAPGKGMK 235
A L N +L+G+ + + W GK +K
Sbjct: 239 DARVNLDNKQLEGQPMIVGW--GKAVK 263
>gi|157131270|ref|XP_001655847.1| gar2, putative [Aedes aegypti]
gi|108871595|gb|EAT35820.1| AAEL012045-PA, partial [Aedes aegypti]
Length = 954
Score = 57.0 bits (136), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/104 (31%), Positives = 54/104 (51%), Gaps = 12/104 (11%)
Query: 135 DPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPR 194
DP+ P+++E NG N +T L++G+L+ + E+EL + FG+YG + SI ++ PR
Sbjct: 174 DPD-PVYKESESGSFDNGDPN--TTNLYLGNLNPKISEQELMELFGKYGPLASIKIMWPR 230
Query: 195 G---------CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
C FV R+DA +AL L ++ + L W
Sbjct: 231 SEEERARGRNCGFVAYMSRRDAERALRALNGKEVMNYLMKLGWG 274
>gi|2565362|gb|AAB81985.1| Sex-lethal protein [Musca domestica]
Length = 318
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + ++EL FG+YG++V N++ PRG AFV N
Sbjct: 171 ARPGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGRPRGVAFVRFN 230
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G T+ LA GK
Sbjct: 231 KREEAQEAISALNNVIPEGASQPLTVRLAEEHGK 264
>gi|134106861|ref|XP_777972.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260672|gb|EAL23325.1| hypothetical protein CNBA4410 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 444
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 11/107 (10%)
Query: 137 NHPIHR---ELAEIQAR--NGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL- 190
N+ R E AE +AR N ++ + TLWIG LS V E+++ + FG++GDV S+ L
Sbjct: 269 NYATQRKPNEAAEKRARVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLP 328
Query: 191 -----IPPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWAPGK 232
P+G +V + DA+ AL + ++ G+ I + +AP K
Sbjct: 329 TDRDTGAPKGFGYVQFSSVDDASAALKAMNGAEIAGRAIRVDFAPPK 375
>gi|58258845|ref|XP_566835.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57222972|gb|AAW41016.1| single-stranded DNA binding protein, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 441
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 11/107 (10%)
Query: 137 NHPIHR---ELAEIQAR--NGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL- 190
N+ R E AE +AR N ++ + TLWIG LS V E+++ + FG++GDV S+ L
Sbjct: 266 NYATQRKPNEAAEKRARVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLP 325
Query: 191 -----IPPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWAPGK 232
P+G +V + DA+ AL + ++ G+ I + +AP K
Sbjct: 326 TDRDTGAPKGFGYVQFSSVDDASAALKAMNGAEIAGRAIRVDFAPPK 372
>gi|6226775|sp|O97018.2|SXL_CHRRU RecName: Full=Sex-lethal homolog
gi|25291016|gb|AAN74807.1| sex-lethal [Chrysomya rufifacies]
Length = 307
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + ++EL FG+YG++V N++ PRG AFV N
Sbjct: 161 ARPGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFN 220
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G T+ LA GK
Sbjct: 221 KREEAQEAISALNNVIPEGASQPLTVRLAEEHGK 254
>gi|168049769|ref|XP_001777334.1| predicted protein [Physcomitrella patens subsp. patens]
gi|168061528|ref|XP_001782740.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665773|gb|EDQ52446.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162671310|gb|EDQ57864.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 416
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V +E+L + FG++G++V + + +GC FV R A +AL +L T
Sbjct: 224 NTTIFVGGLDPAVGDEDLRNVFGQFGELVYVKIPAGKGCGFVQFTHRACAEEALQRLHQT 283
Query: 218 KLQGKTITLAWAPGKGMK---DKDW 239
+ + + L+W G K D W
Sbjct: 284 VIGTQAVRLSWGRSPGNKQTADPGW 308
>gi|357475467|ref|XP_003608019.1| RNA Binding Protein [Medicago truncatula]
gi|355509074|gb|AES90216.1| RNA Binding Protein [Medicago truncatula]
Length = 454
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 51/95 (53%)
Query: 141 HRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVC 200
H A Q + +TT+++G L + +E+L F ++GDV+S+ + +GC FV
Sbjct: 316 HSNGAMAQGSQSEGDSNNTTIFVGGLDSDISDEDLRQPFLQFGDVISVKIPVGKGCGFVQ 375
Query: 201 MNRRQDAAKALYKLKNTKLQGKTITLAWAPGKGMK 235
+ R++A +A+ L T + +T+ L+W G K
Sbjct: 376 LADRKNAEEAIQGLNGTVIGKQTVRLSWGRSPGNK 410
>gi|308801969|ref|XP_003078298.1| DNA-binding protein (ISS) [Ostreococcus tauri]
gi|116056749|emb|CAL53038.1| DNA-binding protein (ISS) [Ostreococcus tauri]
Length = 452
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT++IG+L V EE L F E+G++ P +GC FV RQDA +A+ L +
Sbjct: 299 NTTIFIGNLDHNVTEEHLRVVFEEFGEIAYAKATPKKGCGFVHFFDRQDATEAIENLHGS 358
Query: 218 KLQGKTITLAWA 229
+ K + L+W
Sbjct: 359 MIGSKRVRLSWG 370
>gi|320580282|gb|EFW94505.1| RNA binding protein [Ogataea parapolymorpha DL-1]
Length = 398
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%)
Query: 145 AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRR 204
A Q + +TT+++G LS + E L F YG +V + + P +GC FV +R
Sbjct: 236 AAPQPPPAYSDPTNTTVFVGGLSNNITEATLLSIFEPYGQIVHVKVPPGKGCGFVKFTQR 295
Query: 205 QDAAKALYKLKNTKLQGKTITLAWA 229
DA +A+ +L+ + G + L+W
Sbjct: 296 TDAERAIEQLQGYVIDGSRVRLSWG 320
>gi|13357168|gb|AAK20025.1|AF234183_1 sex-lethal protein SXL1 [Lucilia cuprina]
Length = 324
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + ++EL FG+YG++V N++ PRG AFV N
Sbjct: 178 ARPGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFN 237
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G T+ LA GK
Sbjct: 238 KREEAQEAISALNNVIPEGASQPLTVRLAEEHGK 271
>gi|312373605|gb|EFR21316.1| hypothetical protein AND_17232 [Anopheles darlingi]
Length = 1091
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 139 PIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG--- 195
P+++E NG N +T L++G+L+ + E+ L + FG+YG + SI ++ PR
Sbjct: 141 PVYKETESGSFDNGDPN--TTNLYLGNLNPKISEQALMELFGKYGPLASIKIMWPRSEEE 198
Query: 196 ------CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
C FV R+DA +AL L + G + L W
Sbjct: 199 KMRGRNCGFVAYMSRRDAERALRALNGRDVMGYEMKLGWG 238
>gi|321249350|ref|XP_003191429.1| single-stranded DNA binding protein [Cryptococcus gattii WM276]
gi|317457896|gb|ADV19642.1| single-stranded DNA binding protein, putative [Cryptococcus gattii
WM276]
Length = 442
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 8/98 (8%)
Query: 143 ELAEIQAR--NGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPR 194
E AE +A+ N ++ + TLWIG LS V E+++ + FG++GDV S+ L P+
Sbjct: 276 EAAEKRAKVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLPTDRDTGAPK 335
Query: 195 GCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWAPGK 232
G +V + +DA+ AL + ++ G+ I + +AP K
Sbjct: 336 GFGYVQFSSVEDASAALKAMNGAEIAGRAIRVDFAPPK 373
>gi|313246960|emb|CBY35806.1| unnamed protein product [Oikopleura dioica]
Length = 680
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPR---------GCAFVCMNRRQDAA 208
ST ++I LS EE+++ FG +G +VS+ ++ PR CAFV R DA
Sbjct: 52 STNIFIASLSNRCTEEDVTHYFGRFGPLVSVKIMYPRTQEEKFKDRNCAFVAYCCRNDAE 111
Query: 209 KALYKLKNTKLQGKTITLAWA 229
+A+ KL+N +G + L W
Sbjct: 112 RAMSKLQNNDFKGVDLKLGWG 132
>gi|405117835|gb|AFR92610.1| single-stranded DNA binding protein [Cryptococcus neoformans var.
grubii H99]
Length = 444
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 57/107 (53%), Gaps = 11/107 (10%)
Query: 137 NHPIHR---ELAEIQAR--NGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL- 190
N+ R E AE +AR N ++ + TLWIG LS V E+++ + FG++GDV S+ L
Sbjct: 269 NYATQRKPNEAAEKRARVFNDKQSPPAETLWIGSLSFSVTEDQVYEAFGQHGDVQSVRLP 328
Query: 191 -----IPPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWAPGK 232
P+G +V + DA AL + ++ G+ I + +AP K
Sbjct: 329 TDRDTGAPKGFGYVQFSSVDDATAALKAMNGAEIAGRAIRVDFAPPK 375
>gi|9758270|dbj|BAB08769.1| unnamed protein product [Arabidopsis thaliana]
Length = 390
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAA 208
A G + +TT+++G L V ++EL FG++G+++ + + P + C FV + A
Sbjct: 250 ANAGDNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKASAE 309
Query: 209 KALYKLKNTKLQGKTITLAW--APGKGMKDKDWK 240
AL L T+L G++I L+W +P K W
Sbjct: 310 HALSVLNGTQLGGQSIRLSWGRSPNKQSDQAQWN 343
>gi|195170236|ref|XP_002025919.1| GL10142 [Drosophila persimilis]
gi|194110783|gb|EDW32826.1| GL10142 [Drosophila persimilis]
Length = 956
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 29/108 (26%)
Query: 131 FDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL 190
FD DPN +T L++G+L+ + E++L +TFG YG + SI +
Sbjct: 205 FDTGDPN--------------------TTNLYLGNLNPKISEQQLMETFGRYGPLASIKI 244
Query: 191 IPPRG---------CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+ PR C FV R+DA +AL L + G + L W
Sbjct: 245 MWPRSDEEKARGRNCGFVAYMSRRDAERALRTLNGRYIMGYEMRLGWG 292
>gi|198461072|ref|XP_001361904.2| GA21718 [Drosophila pseudoobscura pseudoobscura]
gi|198137226|gb|EAL26483.2| GA21718 [Drosophila pseudoobscura pseudoobscura]
Length = 956
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 29/108 (26%)
Query: 131 FDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL 190
FD DPN +T L++G+L+ + E++L +TFG YG + SI +
Sbjct: 205 FDTGDPN--------------------TTNLYLGNLNPKISEQQLMETFGRYGPLASIKI 244
Query: 191 IPPRG---------CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+ PR C FV R+DA +AL L + G + L W
Sbjct: 245 MWPRSDEEKARGRNCGFVAYMSRRDAERALRTLNGRYIMGYEMRLGWG 292
>gi|18423684|ref|NP_568815.1| RNA-binding protein 45A [Arabidopsis thaliana]
gi|75334165|sp|Q9FPJ8.1|RB45A_ARATH RecName: Full=Polyadenylate-binding protein RBP45A;
Short=Poly(A)-binding protein RBP45A; AltName:
Full=RNA-binding protein 45A; Short=AtRBP45A
gi|11762114|gb|AAG40335.1|AF324983_1 AT5g54900 [Arabidopsis thaliana]
gi|119360145|gb|ABL66801.1| At5g54900 [Arabidopsis thaliana]
gi|332009171|gb|AED96554.1| RNA-binding protein 45A [Arabidopsis thaliana]
Length = 387
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 2/94 (2%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAA 208
A G + +TT+++G L V ++EL FG++G+++ + + P + C FV + A
Sbjct: 250 ANAGDNDPNNTTIFVGGLDANVTDDELKSIFGQFGELLHVKIPPGKRCGFVQYANKASAE 309
Query: 209 KALYKLKNTKLQGKTITLAW--APGKGMKDKDWK 240
AL L T+L G++I L+W +P K W
Sbjct: 310 HALSVLNGTQLGGQSIRLSWGRSPNKQSDQAQWN 343
>gi|313233401|emb|CBY24516.1| unnamed protein product [Oikopleura dioica]
Length = 669
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 9/81 (11%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPR---------GCAFVCMNRRQDAA 208
ST ++I LS EE+++ FG +G +VS+ ++ PR CAFV R DA
Sbjct: 52 STNIFIASLSNRCTEEDVTHYFGRFGPLVSVKIMYPRTQEEKFKDRNCAFVAYCCRNDAE 111
Query: 209 KALYKLKNTKLQGKTITLAWA 229
+A+ KL+N +G + L W
Sbjct: 112 RAMSKLQNNDFKGVDLKLGWG 132
>gi|302800509|ref|XP_002982012.1| hypothetical protein SELMODRAFT_154896 [Selaginella moellendorffii]
gi|300150454|gb|EFJ17105.1| hypothetical protein SELMODRAFT_154896 [Selaginella moellendorffii]
Length = 398
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT-K 218
TL++G L + V E+L D F YG++ S+ L+P R CAF+ R+DA KA L +
Sbjct: 225 TLYVGGLDERVTTEDLKDNFYSYGEIESLRLVPQRACAFITYTTREDAEKAAEDLAHKLV 284
Query: 219 LQGKTITLAWAPGKGMK 235
+ G + L W + K
Sbjct: 285 VNGVRLKLMWGKPQAAK 301
>gi|168064363|ref|XP_001784132.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664332|gb|EDQ51056.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 453
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V +E+L + FG++G++V + + +GC FV R A +AL +L T
Sbjct: 256 NTTIFVGGLDPAVGDEDLRNVFGQFGELVYVKIPAGKGCGFVQFTHRACAEEALQRLHQT 315
Query: 218 KLQGKTITLAWAPGKGMK---DKDW 239
+ + + L+W G K D W
Sbjct: 316 VIGTQAVRLSWGRSPGNKQTSDPAW 340
>gi|13357170|gb|AAK20026.1|AF234184_1 sex-lethal protein SXL2 [Lucilia cuprina]
Length = 325
Score = 56.2 bits (134), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 54/94 (57%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + ++EL FG+YG++V N++ PRG AFV N
Sbjct: 178 ARPGGESIKDTNLYVTNLPRTITDDELEKIFGKYGNIVQKNILRDKLTGKPRGVAFVRFN 237
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G T+ LA GK
Sbjct: 238 KREEAQEAISALNNVIPEGASQPLTVRLAEEHGK 271
>gi|444313983|ref|XP_004177649.1| hypothetical protein TBLA_0A03300 [Tetrapisispora blattae CBS 6284]
gi|387510688|emb|CCH58130.1| hypothetical protein TBLA_0A03300 [Tetrapisispora blattae CBS 6284]
Length = 362
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 154 ENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYK 213
E+ +TT++IG LS LV E EL F +G++V + + +GC FV R+ A A++K
Sbjct: 250 EDPTNTTVFIGGLSSLVTENELRSLFQPFGEIVYVKIPFGKGCGFVQYETRKAAELAIHK 309
Query: 214 LKNTKLQGKTITLAWAPGKGMKDKD 238
+K ++ I L+W GK K +
Sbjct: 310 MKGVSIKNSKIRLSW--GKAAKTSN 332
>gi|359478387|ref|XP_003632115.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Vitis vinifera]
Length = 438
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 57/123 (46%), Gaps = 4/123 (3%)
Query: 147 IQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQD 206
+QA ++ +TT+++G+L V EEEL F ++G++V + + RGC FV R
Sbjct: 241 LQALPADNDINNTTIFVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTS 300
Query: 207 AAKALYKLKNTKLQGKTITLAWAPGKGMKDKD---WKD-FWEVQDGVSYIPYDRLSKEID 262
A +A+ +++ T + + ++W K D W ++ G PY
Sbjct: 301 AEEAIQRMQGTVIGQLVVRISWGRSPTAKQADPSQWSSAYYGYGQGYDAYPYGATQDPSL 360
Query: 263 YDY 265
Y Y
Sbjct: 361 YAY 363
Score = 41.2 bits (95), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 41/107 (38%), Gaps = 15/107 (14%)
Query: 138 HPIHRELAEIQARNGVENMCS-------TTLWIGHLSKLVQEEELSDTFGEYGDVVSINL 190
HP H A + + + TLWIG L V E L F G+V+SI +
Sbjct: 13 HPSHASAATVSSMASAQPYTQPTSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKI 72
Query: 191 I------PPRGCAFVCMNRRQDAAKALYKLKNTKLQG--KTITLAWA 229
I P G FV A + L T++ G +T L WA
Sbjct: 73 IRNKITGQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNWA 119
>gi|170059381|ref|XP_001865339.1| pre-mRNA-splicing factor RBM22 [Culex quinquefasciatus]
gi|167878167|gb|EDS41550.1| pre-mRNA-splicing factor RBM22 [Culex quinquefasciatus]
Length = 428
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 140 IHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFV 199
+ + A I + E+ TTL++G+L + + E ++ D F YG++ S++L+P + CAFV
Sbjct: 214 LMKRAASIPTLDPPEDKTITTLYVGNLGEHITEVDIRDNFYHYGEIRSVSLVPRQQCAFV 273
Query: 200 CMNRRQDAAKALYKLKNT-KLQGKTITLAWA 229
+R A A K N L GK +T+ WA
Sbjct: 274 QYTKRSAAELAAEKTFNKLVLGGKKLTIKWA 304
>gi|75334879|sp|Q9LEB3.1|RBP47_NICPL RecName: Full=Polyadenylate-binding protein RBP47;
Short=Poly(A)-binding protein RBP47; AltName:
Full=RNA-binding protein 47; Short=NplRBP47
gi|9663769|emb|CAC01238.1| RNA Binding Protein 47 [Nicotiana plumbaginifolia]
Length = 428
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
+TT+++G L V +EEL +F ++G+VVS+ + +GC FV + R A +A+ KL
Sbjct: 293 SNTTIFVGGLDSEVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSG 352
Query: 217 TKLQGKTITLAWA 229
+ + + L+W
Sbjct: 353 AIIGKQAVRLSWG 365
>gi|194707750|gb|ACF87959.1| unknown [Zea mays]
gi|414885794|tpg|DAA61808.1| TPA: hypothetical protein ZEAMMB73_995180 [Zea mays]
Length = 433
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAA 208
AR+ ++ +TT+++G L V EE+L TF +YG++ S+ + + C FV +R++A
Sbjct: 289 ARSDGGDLTNTTVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQCGFVQFAQRKNAE 348
Query: 209 KALYKLKNTKLQGKTITLAWA 229
AL L + + + + L+W
Sbjct: 349 DALQGLNGSTIGKQNVRLSWG 369
>gi|158293785|ref|XP_315111.4| AGAP005006-PA [Anopheles gambiae str. PEST]
gi|157016612|gb|EAA10382.4| AGAP005006-PA [Anopheles gambiae str. PEST]
Length = 1102
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 50/100 (50%), Gaps = 11/100 (11%)
Query: 139 PIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG--- 195
P+++E NG N +T L++G+L+ + E+ L + FG+YG + SI ++ PR
Sbjct: 149 PVYKETESGSFDNGDPN--TTNLYLGNLNPKISEQALMELFGKYGPLASIKIMWPRSEEE 206
Query: 196 ------CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
C FV R+DA +AL L + G + L W
Sbjct: 207 KMRNRNCGFVAYMSRRDAERALRALNGRDVMGYEMKLGWG 246
>gi|356521484|ref|XP_003529385.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 431
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 55/96 (57%), Gaps = 2/96 (2%)
Query: 145 AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRR 204
A Q + ++ +TT+++G L +E+L F ++G+VVS+ + +GC FV R
Sbjct: 300 AVAQGSHSEGDLNNTTIFVGGLDSDTSDEDLRQPFLQFGEVVSVKIPVGKGCGFVQFADR 359
Query: 205 QDAAKALYKLKNTKLQGKTITLAWAPGKGMKDKDWK 240
++A +A++ L T + +T+ L+W G+ +K W+
Sbjct: 360 KNAEEAIHALNGTVIGKQTVRLSW--GRSPGNKHWR 393
>gi|226492692|ref|NP_001144988.1| uncharacterized protein LOC100278143 [Zea mays]
gi|195649537|gb|ACG44236.1| hypothetical protein [Zea mays]
Length = 436
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAA 208
AR+ ++ +TT+++G L V EE+L TF +YG++ S+ + + C FV +R++A
Sbjct: 292 ARSDGGDLTNTTVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQCGFVQFAQRKNAE 351
Query: 209 KALYKLKNTKLQGKTITLAWA 229
AL L + + + + L+W
Sbjct: 352 DALQGLNGSTIGKQNVRLSWG 372
>gi|343427154|emb|CBQ70682.1| related to NAM8-meiotic recombination protein [Sporisorium
reilianum SRZ2]
Length = 968
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS L+ E L F +G++ + + P +GC FV R+QDA A+ ++
Sbjct: 578 NTTVFVGGLSSLISEATLRRYFEHFGEITYVKIPPGKGCGFVQYVRKQDAENAIQRMNGF 637
Query: 218 KLQGKTITLAWAPGKGMK 235
+ I L+W +G K
Sbjct: 638 PILNSKIRLSWGRSQGDK 655
>gi|281206906|gb|EFA81090.1| SWAP/Surp domain-containing protein [Polysphondylium pallidum
PN500]
Length = 1020
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 5/76 (6%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG-----CAFVCMNRRQDAAKALYK 213
TTL+I L+ + E++L F +YG +V + ++PP+ CA V + A+ A Y
Sbjct: 326 TTLFIRQLANNITEDDLRKQFSKYGSIVMVKIVPPKNPQTPYCALVAYTDHKSASDARYY 385
Query: 214 LKNTKLQGKTITLAWA 229
L N ++ G+ + +AWA
Sbjct: 386 LDNKQMLGREMKIAWA 401
>gi|443897314|dbj|GAC74655.1| FOG: RRM domain [Pseudozyma antarctica T-34]
Length = 979
Score = 55.8 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS L+ E L F +G++ + + P +GC FV R+QDA A+ ++
Sbjct: 583 NTTVFVGGLSSLISESTLRRYFEHFGEITYVKIPPGKGCGFVQYVRKQDAENAIQRMNGF 642
Query: 218 KLQGKTITLAWAPGKGMK 235
+ I L+W +G K
Sbjct: 643 PILNSKIRLSWGRSQGDK 660
>gi|2708532|gb|AAB92518.1| putative RNA binding protein [Nicotiana tabacum]
Length = 482
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
+ +TT+++G L V +EEL +F ++G+VVS+ + +GC FV + R A +A+ KL
Sbjct: 345 DASNTTIFVGGLDSDVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKL 404
Query: 215 KNTKLQGKTITLAWA 229
+ + + L+W
Sbjct: 405 SGAIIGKQAVRLSWG 419
>gi|158292281|ref|XP_313808.4| AGAP004509-PA [Anopheles gambiae str. PEST]
gi|347972043|ref|XP_003436831.1| AGAP004509-PB [Anopheles gambiae str. PEST]
gi|157017362|gb|EAA09240.4| AGAP004509-PA [Anopheles gambiae str. PEST]
gi|333469145|gb|EGK97189.1| AGAP004509-PB [Anopheles gambiae str. PEST]
Length = 441
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 51/91 (56%), Gaps = 1/91 (1%)
Query: 140 IHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFV 199
+ + A I + E+ TTL++G+L + + E ++ D F YG++ S++L+P + CAFV
Sbjct: 214 LMKRAASIPTLDPPEDKTITTLYVGNLGEHITEVDIRDNFYHYGEIRSVSLVPRQQCAFV 273
Query: 200 CMNRRQDAAKALYKLKNT-KLQGKTITLAWA 229
+R A A K N L GK +T+ WA
Sbjct: 274 QYTKRAAAELAAEKTFNKLVLGGKKLTIKWA 304
>gi|302813198|ref|XP_002988285.1| hypothetical protein SELMODRAFT_447249 [Selaginella moellendorffii]
gi|300144017|gb|EFJ10704.1| hypothetical protein SELMODRAFT_447249 [Selaginella moellendorffii]
Length = 352
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 137 NHPIHRELAEI------QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL 190
HP+ R ++ A G ++ +TT+++G L + V ++L D F YG++ +
Sbjct: 192 QHPVQRVSYQLVPAYAMPAPAGEDDFTNTTIFVGGLDQNVSLDDLKDVFSPYGEIKYTKI 251
Query: 191 IPPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
P RGC FV R A +AL ++ + + +T+ L+W
Sbjct: 252 PPGRGCGFVQFMTRASAEEALKQVHGSVIGQQTVRLSWG 290
>gi|262360006|gb|ACY56908.1| RH48596p [Drosophila melanogaster]
Length = 339
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 51/85 (60%), Gaps = 6/85 (7%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 186 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 245
Query: 203 RRQDAAKALYKLKNTKLQGKTITLA 227
+R++A +A+ LKN +G + L+
Sbjct: 246 KREEAQEAISALKNVIPEGGSQPLS 270
>gi|357454295|ref|XP_003597428.1| RNA-binding protein [Medicago truncatula]
gi|355486476|gb|AES67679.1| RNA-binding protein [Medicago truncatula]
Length = 428
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 45/75 (60%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++ +TT+++G+L V EEEL F ++G++VS+ + P + C FV R A +A+ K+
Sbjct: 230 DVNNTTIYVGNLDLNVSEEELKQNFLQFGEIVSVKVHPGKACGFVQFGARASAEEAIQKM 289
Query: 215 KNTKLQGKTITLAWA 229
+ L + I ++W
Sbjct: 290 QGKILGQQVIRVSWG 304
Score = 41.2 bits (95), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMNRRQDAAKALYK 213
TLWIG L V E L+ F G+V+SI +I P G F+ A + L
Sbjct: 16 TLWIGDLQYWVDENYLTHCFSHTGEVISIKIIRNKITGQPEGYGFIEFVSHSAAERVLQT 75
Query: 214 LKNTKLQG--KTITLAWA 229
T++ G +T L WA
Sbjct: 76 YNGTQMPGTEQTFRLNWA 93
>gi|194697962|gb|ACF83065.1| unknown [Zea mays]
gi|414885795|tpg|DAA61809.1| TPA: hypothetical protein ZEAMMB73_995180 [Zea mays]
Length = 320
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 47/81 (58%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAA 208
AR+ ++ +TT+++G L V EE+L TF +YG++ S+ + + C FV +R++A
Sbjct: 176 ARSDGGDLTNTTVFVGGLDPNVSEEDLRQTFSQYGEISSVKIPIGKQCGFVQFAQRKNAE 235
Query: 209 KALYKLKNTKLQGKTITLAWA 229
AL L + + + + L+W
Sbjct: 236 DALQGLNGSTIGKQNVRLSWG 256
>gi|302808802|ref|XP_002986095.1| hypothetical protein SELMODRAFT_44024 [Selaginella moellendorffii]
gi|300146243|gb|EFJ12914.1| hypothetical protein SELMODRAFT_44024 [Selaginella moellendorffii]
Length = 366
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 1/77 (1%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT-K 218
TL++G L + V E+L D F YG++ S+ L+P R CAF+ R+DA KA L +
Sbjct: 225 TLYVGGLDERVTTEDLKDNFYSYGEIESLRLVPQRACAFITYTTREDAEKAAEDLAHKLV 284
Query: 219 LQGKTITLAWAPGKGMK 235
+ G + L W + K
Sbjct: 285 VNGVRLKLMWGKPQAAK 301
>gi|1899188|gb|AAC49850.1| DNA binding protein ACBF [Nicotiana tabacum]
Length = 428
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V +EEL +F ++G+VVS+ + +GC FV + R A +A+ KL
Sbjct: 294 NTTIFVGGLDSDVTDEELRQSFNQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGA 353
Query: 218 KLQGKTITLAWA 229
+ + + L+W
Sbjct: 354 IIGKQAVRLSWG 365
>gi|82621158|gb|ABB86267.1| DNA binding protein ACBF-like [Solanum tuberosum]
Length = 372
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 43/72 (59%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V +EEL +F ++G+VVS+ + +GC FV + R A +A+ KL
Sbjct: 243 NTTIFVGGLDSDVTDEELRQSFTQFGEVVSVKIPAGKGCGFVQFSDRSSAQEAIQKLSGA 302
Query: 218 KLQGKTITLAWA 229
+ + + L+W
Sbjct: 303 IIGKQAVRLSWG 314
>gi|118484218|gb|ABK93989.1| unknown [Populus trichocarpa]
Length = 149
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
S LW+G+LS ++E +L+D F ++GD+ S+ P R AFV N+ +DA A+ L+
Sbjct: 41 SRHLWVGNLSHSIEETDLTDEFLQFGDLDSVAFQPGRSYAFVNFNKEEDAIAAIKSLQGY 100
Query: 218 KLQGKTITLAWA 229
L G + + +A
Sbjct: 101 PLAGNPLRIEFA 112
>gi|297844004|ref|XP_002889883.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
gi|297335725|gb|EFH66142.1| ATRBP45B [Arabidopsis lyrata subsp. lyrata]
Length = 408
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L + V ++ L + FG+YG++V + + + C FV + + A +AL L
Sbjct: 262 NTTVFVGGLDQSVTDDHLKNVFGQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGV 321
Query: 218 KLQGKTITLAWA 229
+L G T+ L+W
Sbjct: 322 QLGGTTVRLSWG 333
>gi|194898376|ref|XP_001978788.1| GG11763 [Drosophila erecta]
gi|190650491|gb|EDV47746.1| GG11763 [Drosophila erecta]
Length = 418
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT- 217
TTL++G+L + + E EL D F ++G++ SI L+P + CAFV +R A A + N
Sbjct: 232 TTLYVGNLPEEITEPELRDQFYQFGEIRSIALVPRQQCAFVQYTKRNAAELAAERTFNKL 291
Query: 218 KLQGKTITLAWA 229
+QG+ +++ WA
Sbjct: 292 VIQGRKVSIKWA 303
>gi|356519168|ref|XP_003528246.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 410
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRR----QDAAKALY 212
+TT+++G L V E+L F +YG++VS+ + +GC F N R ++A +AL
Sbjct: 274 TNTTIFVGGLDSNVTAEDLKQPFSQYGEIVSVKIPVGKGCGFTICNSRSPGPKNAEEALQ 333
Query: 213 KLKNTKLQGKTITLAWAPGKGMKDKDWK-DFWEVQDGVSY 251
KL T + + + L+W G+ +K ++ DF G Y
Sbjct: 334 KLNGTTIGKQMVRLSW--GRNPANKQFRADFGNAWSGAYY 371
>gi|195496994|ref|XP_002095913.1| GE25369 [Drosophila yakuba]
gi|194182014|gb|EDW95625.1| GE25369 [Drosophila yakuba]
Length = 418
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT- 217
TTL++G+L + + E EL D F ++G++ SI L+P + CAFV +R A A + N
Sbjct: 232 TTLYVGNLPEEITEPELRDQFYQFGEIRSIALVPRQQCAFVQYTKRNAAELAAERTFNKL 291
Query: 218 KLQGKTITLAWA 229
+QG+ +++ WA
Sbjct: 292 VIQGRKVSIKWA 303
>gi|357149687|ref|XP_003575198.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 421
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++ + T+++G L V E+EL TF +YGDV S+ + + C FV R DA +AL L
Sbjct: 289 DLTNRTVYVGGLDPNVSEDELRKTFAKYGDVASVKIPVGKQCGFVQFVNRADAEEALQAL 348
Query: 215 KNTKLQGKTITLAWA 229
+ + + + L+W
Sbjct: 349 SGSTIGKQAVRLSWG 363
>gi|195343343|ref|XP_002038257.1| GM10722 [Drosophila sechellia]
gi|195568111|ref|XP_002102061.1| GD19696 [Drosophila simulans]
gi|194133278|gb|EDW54794.1| GM10722 [Drosophila sechellia]
gi|194197988|gb|EDX11564.1| GD19696 [Drosophila simulans]
Length = 418
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT- 217
TTL++G+L + + E EL D F ++G++ SI L+P + CAFV +R A A + N
Sbjct: 232 TTLYVGNLPEEITEPELRDQFYQFGEIRSIALVPRQQCAFVQYTKRNAAELAAERTFNKL 291
Query: 218 KLQGKTITLAWA 229
+QG+ +++ WA
Sbjct: 292 VIQGRKVSIKWA 303
>gi|213401961|ref|XP_002171753.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
gi|211999800|gb|EEB05460.1| RNA-binding post-transcriptional regulator csx1
[Schizosaccharomyces japonicus yFS275]
Length = 476
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
+TT+++G LS V EEEL F +G+++ + + P +GC FV RQ A A+ +++
Sbjct: 306 TNTTVFVGGLSGYVTEEELRFLFQNFGEIIYVKIPPGKGCGFVQFVNRQSAELAINQMQG 365
Query: 217 TKLQGKTITLAWAPGKG 233
L I L+W +G
Sbjct: 366 YPLGKSRIRLSWGRSQG 382
>gi|28573264|ref|NP_649440.3| CG14641 [Drosophila melanogaster]
gi|16769690|gb|AAL29064.1| LD46870p [Drosophila melanogaster]
gi|28381138|gb|AAF52166.2| CG14641 [Drosophila melanogaster]
gi|220956458|gb|ACL90772.1| CG14641-PA [synthetic construct]
Length = 418
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT- 217
TTL++G+L + + E EL D F ++G++ SI L+P + CAFV +R A A + N
Sbjct: 232 TTLYVGNLPEEITEPELRDQFYQFGEIRSIALVPRQQCAFVQYTKRNAAELAAERTFNKL 291
Query: 218 KLQGKTITLAWA 229
+QG+ +++ WA
Sbjct: 292 VIQGRKVSIKWA 303
>gi|406603569|emb|CCH44882.1| Negative growth regulatory protein NGR1 [Wickerhamomyces ciferrii]
Length = 641
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 44/73 (60%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
+TT++IG L+ + E+ L+ F +G++ + + P +GC F+ ++R+DA A+ ++
Sbjct: 385 TNTTVFIGGLAPGIPEQTLAALFQPFGNITHVKIPPGKGCGFIRFDKREDAEAAIAGMQG 444
Query: 217 TKLQGKTITLAWA 229
++ G + L+W
Sbjct: 445 FQIGGSRVRLSWG 457
>gi|406831762|ref|ZP_11091356.1| RNA-binding protein (RRM domain) [Schlesneria paludicola DSM 18645]
Length = 101
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMNRRQDAAKALY 212
T +++G+L V E +L F YG V S+ + PRG AFV MNR +D+ +A+
Sbjct: 2 TQIYVGNLPFTVSEPDLMGMFARYGRVSSVRMATDKSTGRPRGFAFVTMNRMEDSDEAIV 61
Query: 213 KLKNTKLQGKTITLAWA 229
+L + L G+TI + A
Sbjct: 62 RLNGSHLSGRTIVVNEA 78
>gi|4930239|pdb|3SXL|A Chain A, Sex-Lethal Rna Recognition Domains 1 And 2 From Drosophila
Melanogaster
gi|4930240|pdb|3SXL|B Chain B, Sex-Lethal Rna Recognition Domains 1 And 2 From Drosophila
Melanogaster
gi|4930241|pdb|3SXL|C Chain C, Sex-Lethal Rna Recognition Domains 1 And 2 From Drosophila
Melanogaster
Length = 184
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 91 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 150
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G ++ LA GK
Sbjct: 151 KREEAQEAISALNNVIPEGGSQPLSVRLAEEHGK 184
>gi|325179974|emb|CCA14376.1| U2associated splicing factor putative [Albugo laibachii Nc14]
Length = 973
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG---------CAFVCMNRRQDAA 208
+T L++G+L+ + E+ L + FG++G+V S+ ++ PR C FV R+DA
Sbjct: 237 TTNLYVGNLAPSMTEQMLEEEFGKFGEVYSVKIMWPRTEDERLRRRICGFVSFFTREDAD 296
Query: 209 KALYKLKNTKLQGKTITLAWAPGKGMK 235
+A L N +L G I + W GK +K
Sbjct: 297 EARVALNNRELNGHEIVVGW--GKAVK 321
>gi|15222783|ref|NP_175383.1| RNA-binding protein 47A [Arabidopsis thaliana]
gi|378522727|sp|F4I3B3.1|RB47A_ARATH RecName: Full=Polyadenylate-binding protein RBP47A;
Short=Poly(A)-binding protein RBP47A; AltName:
Full=RNA-binding protein 47A; Short=AtRBP47A
gi|332194327|gb|AEE32448.1| RNA-binding protein 47A [Arabidopsis thaliana]
Length = 445
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
++T+++G L V EE+L F ++G+VVS+ + +GC FV RQ A +A+ L T
Sbjct: 326 NSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGT 385
Query: 218 KLQGKTITLAWA 229
+ T+ L+W
Sbjct: 386 VIGKNTVRLSWG 397
>gi|147859325|emb|CAN83958.1| hypothetical protein VITISV_039907 [Vitis vinifera]
Length = 410
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 60/128 (46%), Gaps = 9/128 (7%)
Query: 105 DKSKIIRVLNLWQKNEVFT---PDIIHPLFDMADPNHPIHRELAEIQARNGVENMCSTTL 161
D+ + +R +N + N +F P I P A P+ Q G + +TT+
Sbjct: 219 DEGEQLRAMN--EMNGMFCSTRPMRIGP----AATKKPVGASFQNTQGXQGESDPNNTTI 272
Query: 162 WIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKLQG 221
++G L V ++ L F +YG++V + + + C FV R A +AL L T+L
Sbjct: 273 FVGGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRCGFVQFANRACAEQALAGLNGTQLGA 332
Query: 222 KTITLAWA 229
++I L+W
Sbjct: 333 QSIRLSWG 340
>gi|297852632|ref|XP_002894197.1| hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp.
lyrata]
gi|297340039|gb|EFH70456.1| hypothetical protein ARALYDRAFT_474095 [Arabidopsis lyrata subsp.
lyrata]
Length = 450
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
++T+++G L V EE+L F ++G+VVS+ + +GC FV RQ A +A+ L T
Sbjct: 331 NSTIFVGGLDADVTEEDLMQPFSQFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGT 390
Query: 218 KLQGKTITLAWA 229
+ T+ L+W
Sbjct: 391 VIGKNTVRLSWG 402
>gi|10120421|gb|AAG13046.1|AC011807_5 Putative RNA binding protein [Arabidopsis thaliana]
Length = 468
Score = 55.1 bits (131), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
++T+++G L V EE+L F ++G+VVS+ + +GC FV RQ A +A+ L T
Sbjct: 349 NSTIFVGGLDADVTEEDLMQPFSDFGEVVSVKIPVGKGCGFVQFANRQSAEEAIGNLNGT 408
Query: 218 KLQGKTITLAWA 229
+ T+ L+W
Sbjct: 409 VIGKNTVRLSWG 420
>gi|384495849|gb|EIE86340.1| hypothetical protein RO3G_11051 [Rhizopus delemar RA 99-880]
Length = 1099
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 44/71 (61%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTK 218
TT+++G L+ + EEEL FG +G++V++ +IP + AF+ ++ A +A+ +L +
Sbjct: 191 TTVFVGGLNNTITEEELRAYFGTFGNIVAVKIIPLKNIAFIQYEKKSSAEQAISELNGSH 250
Query: 219 LQGKTITLAWA 229
L G + L++
Sbjct: 251 LGGAKLRLSFG 261
>gi|302760919|ref|XP_002963882.1| hypothetical protein SELMODRAFT_80061 [Selaginella moellendorffii]
gi|300169150|gb|EFJ35753.1| hypothetical protein SELMODRAFT_80061 [Selaginella moellendorffii]
Length = 332
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 51/99 (51%), Gaps = 6/99 (6%)
Query: 137 NHPIHRELAEI------QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL 190
HP+ R ++ A G ++ +TT+++G L + V ++L D F YG++ +
Sbjct: 192 QHPVQRVSYQLVPAYAMPAPAGEDDFTNTTIFVGGLDQNVSLDDLKDVFSPYGEIKYTKI 251
Query: 191 IPPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
P RGC FV R A +AL ++ + + +T+ L+W
Sbjct: 252 PPGRGCGFVQFMTRASAEEALKQVHGSVIGQQTVRLSWG 290
>gi|389586143|dbj|GAB68872.1| cyclophilin E [Plasmodium cynomolgi strain B]
Length = 126
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDV----VSINLIPP--RGCAFVCMNRRQDAAKA 210
+ L++G + + + E+ L D F +GDV V INL+ RG AFV + DA A
Sbjct: 6 ATEVLYVGGIDETIDEKSLYDIFSSFGDVRNIEVPINLVTKKNRGFAFVEYVEKDDAKHA 65
Query: 211 LYKLKNTKLQGKTITLAWAPGKGMK 235
LY + N +L GK I + ++ + M+
Sbjct: 66 LYNMNNFELNGKKIHVNYSKNRKME 90
>gi|118344182|ref|NP_001071914.1| zinc finger protein [Ciona intestinalis]
gi|92081514|dbj|BAE93304.1| zinc finger protein [Ciona intestinalis]
Length = 413
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 1/92 (1%)
Query: 143 ELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMN 202
E AE +A E+ TTL+IG L + V EE+L D F YG++ SI++ + AFV
Sbjct: 219 ESAEQEAVAPPEDQTITTLYIGGLGEAVNEEDLRDQFYHYGEIRSIHMATNQNYAFVQFT 278
Query: 203 RRQDAAKALYKLKNT-KLQGKTITLAWAPGKG 233
+R DA A + ++GK I + W +G
Sbjct: 279 KRSDAETAAKRTAGRLMIKGKRIVVRWGKSQG 310
>gi|328858949|gb|EGG08060.1| hypothetical protein MELLADRAFT_31227 [Melampsora larici-populina
98AG31]
Length = 76
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 42/73 (57%), Gaps = 1/73 (1%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L + EE L F +G++ + + P +GC FV RR DA A+ K+ +
Sbjct: 4 NTTVFVGGLPACISEETLKTFFQNFGEITYVKIPPNKGCGFVQYVRRADAEAAMLKMHDF 63
Query: 218 KLQGKT-ITLAWA 229
+ GK+ I L+W
Sbjct: 64 PIHGKSRIRLSWG 76
>gi|298706390|emb|CBJ29399.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 434
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 146 EIQARNGVENM--CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNR 203
+Q + G +TT+++G ++ V E+ L DTF G++ ++ P RGCAFV
Sbjct: 189 SVQGQTGAHATDPSNTTVFVGGINDSVTEKVLRDTFNSAGEIQTVTTPPGRGCAFVTFAH 248
Query: 204 RQDAAKALYKLKNTKLQGKTITLAWA 229
R A + ++ T + G + L+W
Sbjct: 249 RASAEHVINNMQGTTVCGSCVRLSWG 274
>gi|326495566|dbj|BAJ85879.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 479
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++ +TT+++G L V E++L TF +YG++ S+ + + C FV +R++A AL L
Sbjct: 344 DLTNTTVFVGGLDPNVSEDDLKQTFSQYGEISSVKIPVGKQCGFVQFLQRKNAEDALQGL 403
Query: 215 KNTKLQGKTITLAWA--PGKGMKDKDWKDFWEVQDGVSYIP 253
+ + +T+ L+W P D + W +G+ Y P
Sbjct: 404 NGSTIGKQTVRLSWGRNPANKQLRSDNGNQWN--NGMYYAP 442
>gi|156102883|ref|XP_001617134.1| cyclophilin E [Plasmodium vivax Sal-1]
gi|148806008|gb|EDL47407.1| cyclophilin E, putative [Plasmodium vivax]
Length = 124
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDV----VSINLIPP--RGCAFVCMNRRQDAAKA 210
+ L++G + + + E+ L D F +GDV V INL+ RG AFV + DA A
Sbjct: 6 ATEVLYVGGIDETIDEKSLYDIFSSFGDVRNIEVPINLVTKKNRGFAFVEYVEKDDAKHA 65
Query: 211 LYKLKNTKLQGKTITLAWAPGKGMK 235
LY + N +L GK I + ++ + M+
Sbjct: 66 LYNMNNFELNGKKIYVNYSKNRKME 90
>gi|449471209|ref|XP_004153241.1| PREDICTED: polyadenylate-binding protein RBP45-like, partial
[Cucumis sativus]
Length = 156
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G+L V +E L FG+YG++V + + + C FV R A +AL L T
Sbjct: 16 NTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRCGFVQFADRNCAEEALRVLNGT 75
Query: 218 KLQGKTITLAWA 229
++ G+ I L+W
Sbjct: 76 QIGGQNIRLSWG 87
>gi|356500047|ref|XP_003518846.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 431
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 54/96 (56%), Gaps = 2/96 (2%)
Query: 145 AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRR 204
A Q + ++ +TT+++G L +E+L F ++G+VVS+ + +GC FV R
Sbjct: 299 AVAQGSHSEGDINNTTIFVGGLDSDTSDEDLRQPFLQFGEVVSVKIPVGKGCGFVQFADR 358
Query: 205 QDAAKALYKLKNTKLQGKTITLAWAPGKGMKDKDWK 240
++A +A+ L T + +T+ L+W G+ +K W+
Sbjct: 359 KNAEEAIQGLNGTVIGKQTVRLSW--GRSPGNKHWR 392
>gi|30524689|emb|CAC85246.1| salt tolerance protein 6 [Beta vulgaris]
Length = 322
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G+L V +E L TF YG++V + + + C FV R A +AL L
Sbjct: 186 NTTIFVGNLDSNVTDEHLRQTFSPYGELVHVKIPAGKQCGFVQFTNRSSAEEALRVLNGM 245
Query: 218 KLQGKTITLAWA 229
+L G+ + L+W
Sbjct: 246 QLGGRNVRLSWG 257
>gi|71005504|ref|XP_757418.1| hypothetical protein UM01271.1 [Ustilago maydis 521]
gi|46096901|gb|EAK82134.1| hypothetical protein UM01271.1 [Ustilago maydis 521]
Length = 1059
Score = 54.7 bits (130), Expect = 4e-05, Method: Composition-based stats.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS L+ E L F +G++ + + P +GC FV R+QDA A+ ++
Sbjct: 620 NTTVFVGGLSSLISEVTLRRYFEHFGEISYVKIPPGKGCGFVQYVRKQDAETAIQRMNGF 679
Query: 218 KLQGKTITLAWAPGKGMK 235
+ I L+W +G K
Sbjct: 680 PILNSKIRLSWGRSQGDK 697
>gi|157833885|pdb|1SXL|A Chain A, Resonance Assignments And Solution Structure Of The Second
Rna-Binding Domain Of Sex-Lethal Determined By
Multidimensional Heteronuclear Magnetic Resonance
Spectroscopy
Length = 97
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 4 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 63
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G ++ LA GK
Sbjct: 64 KREEAQEAISALNNVIPEGGSQPLSVRLAEEHGK 97
>gi|157128887|ref|XP_001661533.1| RNA binding motif protein [Aedes aegypti]
gi|108872461|gb|EAT36686.1| AAEL011251-PA [Aedes aegypti]
Length = 429
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 1/91 (1%)
Query: 140 IHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFV 199
+ + A I E+ TTL++G+L + + E ++ D F YG++ S++L+P + CAFV
Sbjct: 214 LMKRAASIPTLEPPEDKTITTLYVGNLGEHLTEVDIRDNFYHYGEIRSVSLVPRQQCAFV 273
Query: 200 CMNRRQDAAKALYKLKNT-KLQGKTITLAWA 229
+R A A K N L GK +T+ WA
Sbjct: 274 QYTKRAAAELAAEKTFNKLVLGGKKLTIKWA 304
>gi|393912251|gb|EFO21859.2| Rbm22 protein [Loa loa]
Length = 332
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 154 ENMCSTTLWIGHL--SKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKAL 211
E+ TTL++G L + ++ E L D F ++G++ S+NL+P +GCAF+ R A KA
Sbjct: 153 EDTTITTLYVGDLGPAGVIGEAALRDYFYQFGEIRSLNLLPNKGCAFISFTTRLAAEKAA 212
Query: 212 YKLKNTK-LQGKTITLAWAPGKGMKDKDWKDFWEVQDGV 249
+ N LQG+ + + W + ++ K E G+
Sbjct: 213 ERSFNKLILQGRRLKIRWGRPQAQNTQEEKKRAEPVAGL 251
>gi|195113937|ref|XP_002001524.1| GI21935 [Drosophila mojavensis]
gi|193918118|gb|EDW16985.1| GI21935 [Drosophila mojavensis]
Length = 428
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 1/72 (1%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT- 217
TTL++G+L + + E E+ D F +YG++ SI L+P + C+FV +R A A + N
Sbjct: 232 TTLYVGNLPEEITEPEIRDQFYQYGEIRSIALVPRQQCSFVQYTKRNAAELAAERTFNKL 291
Query: 218 KLQGKTITLAWA 229
+QG+ +++ WA
Sbjct: 292 VIQGRKVSIKWA 303
>gi|52075416|emb|CAG29242.1| sex-lethal protein [Bactrocera oleae]
Length = 339
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 181 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFN 240
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G T+ LA GK
Sbjct: 241 KREEAQEAISALNNVIPEGGSQPLTVRLAEEHGK 274
>gi|449454734|ref|XP_004145109.1| PREDICTED: polyadenylate-binding protein RBP45B-like [Cucumis
sativus]
Length = 404
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 42/72 (58%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G+L V +E L FG+YG++V + + + C FV R A +AL L T
Sbjct: 264 NTTIFVGNLDANVTDEHLRQVFGQYGELVHVKIPVGKRCGFVQFADRNCAEEALRVLNGT 323
Query: 218 KLQGKTITLAWA 229
++ G+ I L+W
Sbjct: 324 QIGGQNIRLSWG 335
>gi|392575524|gb|EIW68657.1| hypothetical protein TREMEDRAFT_71869 [Tremella mesenterica DSM
1558]
Length = 389
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKL 219
TL++G+L V + EL+ F YG V I + RG AFV ++ Q A A+ L+NT +
Sbjct: 251 TLFVGNLGPYVTQAELTPLFQTYGYVTDIRMQADRGYAFVKLDTSQAAVSAMATLQNTMV 310
Query: 220 QGKTITLAWA 229
QG+ + + W
Sbjct: 311 QGRPLKIQWG 320
>gi|219124392|ref|XP_002182488.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405834|gb|EEC45775.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 184
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 151 NGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKA 210
NGV C TT+++GHL + + + F +YG+VV INL+ RG F M R + AA A
Sbjct: 62 NGVS--C-TTIYVGHLHPKLTQTHIEKMFSKYGEVVRINLLANRGYGFCEMARPEQAAAA 118
Query: 211 LYKLKNTKLQGKTITLAWA 229
+ L L G+ +T+ A
Sbjct: 119 MTALHGQSLLGRLLTVRPA 137
>gi|348533327|ref|XP_003454157.1| PREDICTED: hypothetical protein LOC100707118 [Oreochromis
niloticus]
Length = 514
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKL 219
+LW+G++++ V E++L D F +G++ SI ++ R CAFV AAKAL KL+ +L
Sbjct: 368 SLWVGNITQEVTEKDLCDLFKNFGEIESIRVLHERFCAFVNFKNANMAAKALDKLQGVEL 427
Query: 220 QGKTITLAW 228
G + + +
Sbjct: 428 GGNKLVMRY 436
>gi|302837077|ref|XP_002950098.1| hypothetical protein VOLCADRAFT_104604 [Volvox carteri f.
nagariensis]
gi|300264571|gb|EFJ48766.1| hypothetical protein VOLCADRAFT_104604 [Volvox carteri f.
nagariensis]
Length = 1079
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPP---------RGCAFVCMNRRQDAA 208
+T L++G+L+ V EE L FG +G + S+ ++ P R C FV RR DA
Sbjct: 221 TTNLYVGNLAPEVDEEVLKIEFGRFGAIASVKVMWPRDEEQRRKGRNCGFVAFMRRDDAE 280
Query: 209 KALYKLKNTKLQGKTITLAWA 229
A+ KL L G + + W
Sbjct: 281 TAMRKLNGITLHGNELHIGWG 301
>gi|302815924|ref|XP_002989642.1| hypothetical protein SELMODRAFT_428163 [Selaginella moellendorffii]
gi|300142613|gb|EFJ09312.1| hypothetical protein SELMODRAFT_428163 [Selaginella moellendorffii]
Length = 473
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKL 219
TL++G L + V E+L D F YG++ S+ L+P R CAF+ R+DA KA L + K
Sbjct: 151 TLYVGGLDERVTTEDLKDNFYSYGEIESLRLVPQRACAFITYTTREDAEKAAEDL-SFKH 209
Query: 220 QGKTITL 226
Q +T L
Sbjct: 210 QSRTSKL 216
>gi|225435468|ref|XP_002285479.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Vitis vinifera]
Length = 447
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 47/83 (56%)
Query: 147 IQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQD 206
+QA ++ +TT+++G+L V EEEL F ++G++V + + RGC FV R
Sbjct: 241 LQALPADNDINNTTIFVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTS 300
Query: 207 AAKALYKLKNTKLQGKTITLAWA 229
A +A+ +++ T + + ++W
Sbjct: 301 AEEAIQRMQGTVIGQLVVRISWG 323
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 41/107 (38%), Gaps = 15/107 (14%)
Query: 138 HPIHRELAEIQARNGVENMCSTT-------LWIGHLSKLVQEEELSDTFGEYGDVVSINL 190
HP H A + + + T LWIG L V E L F G+V+SI +
Sbjct: 13 HPSHASAATVSSMASAQPYTQPTSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKI 72
Query: 191 I------PPRGCAFVCMNRRQDAAKALYKLKNTKLQG--KTITLAWA 229
I P G FV A + L T++ G +T L WA
Sbjct: 73 IRNKITGQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNWA 119
>gi|6226164|sp|O61374.2|SXL_CERCA RecName: Full=Sex-lethal homolog; AltName: Full=CCSXL
Length = 348
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 186 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFN 245
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G T+ LA GK
Sbjct: 246 KREEAQEAISALNNVIPEGASQPLTVRLAEEHGK 279
>gi|281359985|ref|NP_001162689.1| Sex lethal, isoform AB [Drosophila melanogaster]
gi|272506012|gb|ACZ95225.1| Sex lethal, isoform AB [Drosophila melanogaster]
Length = 322
Score = 54.3 bits (129), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 169 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 228
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G ++ LA GK
Sbjct: 229 KREEAQEAISALNNVIPEGGSQPLSVRLAEEHGK 262
>gi|78706528|ref|NP_001027065.1| Sex lethal, isoform L [Drosophila melanogaster]
gi|78710139|ref|NP_727162.2| Sex lethal, isoform D [Drosophila melanogaster]
gi|281359987|ref|NP_001162690.1| Sex lethal, isoform T [Drosophila melanogaster]
gi|135080|sp|P19339.1|SXL_DROME RecName: Full=Protein sex-lethal
gi|158426|gb|AAA28884.1| sex-linked protein [Drosophila melanogaster]
gi|158525|gb|AAA28922.1| Sx1 [Drosophila melanogaster]
gi|10728509|gb|AAG22410.1| Sex lethal, isoform D [Drosophila melanogaster]
gi|71854534|gb|AAZ52511.1| Sex lethal, isoform L [Drosophila melanogaster]
gi|272506013|gb|ACZ95226.1| Sex lethal, isoform T [Drosophila melanogaster]
Length = 354
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 201 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 260
Query: 203 RRQDAAKALYKLKNTKLQGKTITLA 227
+R++A +A+ L N +G + L+
Sbjct: 261 KREEAQEAISALNNVIPEGGSQPLS 285
>gi|12643503|sp|Q24668.2|SXL_DROSU RecName: Full=Protein sex-lethal
Length = 354
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 203 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 262
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G ++ LA GK
Sbjct: 263 KREEAQEAISALNNVIPEGGSQPLSVRLAQEHGK 296
>gi|297746331|emb|CBI16387.3| unnamed protein product [Vitis vinifera]
Length = 445
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 47/83 (56%)
Query: 147 IQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQD 206
+QA ++ +TT+++G+L V EEEL F ++G++V + + RGC FV R
Sbjct: 241 LQALPADNDINNTTIFVGNLDPNVTEEELKQIFSQFGELVYVKIPAGRGCGFVQFGTRTS 300
Query: 207 AAKALYKLKNTKLQGKTITLAWA 229
A +A+ +++ T + + ++W
Sbjct: 301 AEEAIQRMQGTVIGQLVVRISWG 323
Score = 41.6 bits (96), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 41/107 (38%), Gaps = 15/107 (14%)
Query: 138 HPIHRELAEIQARNGVENMCS-------TTLWIGHLSKLVQEEELSDTFGEYGDVVSINL 190
HP H A + + + TLWIG L V E L F G+V+SI +
Sbjct: 13 HPSHASAATVSSMASAQPYTQPTSVEEVRTLWIGDLQYWVDENYLHSCFAHTGEVISIKI 72
Query: 191 I------PPRGCAFVCMNRRQDAAKALYKLKNTKLQG--KTITLAWA 229
I P G FV A + L T++ G +T L WA
Sbjct: 73 IRNKITGQPEGYGFVEFVSHAAAERILQAYNGTQMPGTEQTFRLNWA 119
>gi|221061067|ref|XP_002262103.1| cyclophilin [Plasmodium knowlesi strain H]
gi|193811253|emb|CAQ41981.1| cyclophilin, putative [Plasmodium knowlesi strain H]
Length = 127
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDV----VSINLIPP--RGCAFVCMNRRQDAAKA 210
+ L++G + + + E+ L D F +GDV V IN + RG AFV + DA A
Sbjct: 6 ATEVLYVGGIDETIDEKSLYDIFSSFGDVRNIEVPINFVTKKNRGFAFVEYVEKDDAKHA 65
Query: 211 LYKLKNTKLQGKTITLAWAPGKGMK 235
LY + N +L GK I + ++ K M+
Sbjct: 66 LYNMNNFELNGKRIYVNYSRNKKME 90
>gi|78710141|ref|NP_727163.2| Sex lethal, isoform E [Drosophila melanogaster]
gi|78710163|ref|NP_727165.2| Sex lethal, isoform A [Drosophila melanogaster]
gi|45446831|gb|AAO41638.2| Sex lethal, isoform A [Drosophila melanogaster]
gi|71854536|gb|AAZ52512.1| Sex lethal, isoform E [Drosophila melanogaster]
Length = 314
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 161 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 220
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G ++ LA GK
Sbjct: 221 KREEAQEAISALNNVIPEGGSQPLSVRLAEEHGK 254
>gi|289803032|gb|ADD20766.1| RH41387p [Drosophila melanogaster]
Length = 322
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 169 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 228
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G ++ LA GK
Sbjct: 229 KREEAQEAISALNNVIPEGGSQPLSVRLAEEHGK 262
>gi|2981305|gb|AAC38968.1| sex-lethal homolog CcSXL [Ceratitis capitata]
Length = 340
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 178 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGMIVQKNILRDKLTGKPRGVAFVRFN 237
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G T+ LA GK
Sbjct: 238 KREEAQEAISALNNVIPEGASQPLTVRLAEEHGK 271
>gi|4929888|pdb|1B7F|A Chain A, Sxl-Lethal ProteinRNA COMPLEX
gi|4929889|pdb|1B7F|B Chain B, Sxl-Lethal ProteinRNA COMPLEX
Length = 168
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 80 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 139
Query: 203 RRQDAAKALYKLKNTKLQGKTITLA 227
+R++A +A+ L N +G + L+
Sbjct: 140 KREEAQEAISALNNVIPEGGSQPLS 164
>gi|1403308|emb|CAA67016.1| sex-lethal [Drosophila subobscura]
Length = 346
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 195 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 254
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G ++ LA GK
Sbjct: 255 KREEAQEAISALNNVIPEGGSQPLSVRLAQEHGK 288
>gi|312079522|ref|XP_003142211.1| Rbm22 protein [Loa loa]
Length = 376
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 154 ENMCSTTLWIGHL--SKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKAL 211
E+ TTL++G L + ++ E L D F ++G++ S+NL+P +GCAF+ R A KA
Sbjct: 197 EDTTITTLYVGDLGPAGVIGEAALRDYFYQFGEIRSLNLLPNKGCAFISFTTRLAAEKAA 256
Query: 212 YKLKNTK-LQGKTITLAWAPGKGMKDKDWKDFWEVQDGV 249
+ N LQG+ + + W + ++ K E G+
Sbjct: 257 ERSFNKLILQGRRLKIRWGRPQAQNTQEEKKRAEPVAGL 295
>gi|169597899|ref|XP_001792373.1| hypothetical protein SNOG_01741 [Phaeosphaeria nodorum SN15]
gi|160707614|gb|EAT91390.2| hypothetical protein SNOG_01741 [Phaeosphaeria nodorum SN15]
Length = 462
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 70/150 (46%), Gaps = 15/150 (10%)
Query: 1 MDVIKTFNQELSSLYDTKPP-ISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYK 59
M ++ L SL KPP ++ K+ AIT+ + I++ K +++ + +K
Sbjct: 1 MAALEELTTTLQSLSTLKPPGVTPTKVKAITQICVDNIQYDKVLIEKILLQYSNSPATHK 60
Query: 60 VPALYVIDSLVRQ------------SRHQFQDKDVFGPRFARN-LKATFQHLYQCPPE-D 105
+ LYV+DS++RQ S+ G + R L + L + PE
Sbjct: 61 LGVLYVVDSVIRQWVEKAKKAGQAVSKQAAPGTYASGVQLVREALPVVLKDLVKNAPETQ 120
Query: 106 KSKIIRVLNLWQKNEVFTPDIIHPLFDMAD 135
K KI ++L++WQ+ + F PD+I + + +
Sbjct: 121 KEKISKLLDIWQRGQTFPPDMIASMKQLVN 150
>gi|281359979|ref|NP_001162686.1| Sex lethal, isoform P [Drosophila melanogaster]
gi|28317144|gb|AAO39587.1| LD15933p [Drosophila melanogaster]
gi|272506009|gb|ACZ95222.1| Sex lethal, isoform P [Drosophila melanogaster]
Length = 352
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 201 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 260
Query: 203 RRQDAAKALYKLKNTKLQGKTITLA 227
+R++A +A+ L N +G + L+
Sbjct: 261 KREEAQEAISALNNVIPEGGSQPLS 285
>gi|42768808|gb|AAS45604.1| sex-lethal [Rhynchosciara americana]
Length = 293
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR E + T L++ +L + + EE+L + FG+YG +V N++ PRG AF+ N
Sbjct: 155 ARPAGEELKETNLYVTNLPRTITEEQLDEIFGKYGLIVQKNILRDKMTGKPRGVAFIRYN 214
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G T+ +A GK
Sbjct: 215 KREEAQEAIAALNNVIPEGSNQPLTVRVAEEHGK 248
>gi|78710119|ref|NP_727160.2| Sex lethal, isoform J [Drosophila melanogaster]
gi|78710165|ref|NP_727166.2| Sex lethal, isoform G [Drosophila melanogaster]
gi|22831874|gb|AAN09198.1| Sex lethal, isoform J [Drosophila melanogaster]
gi|71854533|gb|AAN09200.2| Sex lethal, isoform G [Drosophila melanogaster]
Length = 346
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 193 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 252
Query: 203 RRQDAAKALYKLKNTKLQGKTITLA 227
+R++A +A+ L N +G + L+
Sbjct: 253 KREEAQEAISALNNVIPEGGSQPLS 277
>gi|260166763|gb|ACX32993.1| RE12578p [Drosophila melanogaster]
Length = 360
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 207 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 266
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G ++ LA GK
Sbjct: 267 KREEAQEAISALNNVIPEGGSQPLSVRLAEEHGK 300
>gi|42768806|gb|AAS45603.1| sex-lethal [Bradysia coprophila]
Length = 289
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR E + T L++ +L + + EE+L + FG+YG +V N++ PRG AF+ N
Sbjct: 151 ARPAGEELKETNLYVTNLPRTITEEQLDEIFGKYGLIVQKNILRDKMTGKPRGVAFIRYN 210
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G T+ +A GK
Sbjct: 211 KREEAQEAIAALNNVIPEGSNQPLTVRVAEEHGK 244
>gi|42768810|gb|AAS45605.1| sex-lethal [Trichomegalosphys pubescens]
Length = 292
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR E + T L++ +L + + EE+L + FG+YG +V N++ PRG AF+ N
Sbjct: 154 ARPAGEEIKETNLYVTNLPRTITEEQLDEIFGKYGLIVQKNILRDKMTGKPRGVAFIRYN 213
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G T+ +A GK
Sbjct: 214 KREEAQEAIAALNNVIPEGSNQPLTVRVAEEHGK 247
>gi|125777509|ref|XP_001359630.1| GA13140 [Drosophila pseudoobscura pseudoobscura]
gi|195156856|ref|XP_002019312.1| GL12337 [Drosophila persimilis]
gi|54639378|gb|EAL28780.1| GA13140 [Drosophila pseudoobscura pseudoobscura]
gi|194115903|gb|EDW37946.1| GL12337 [Drosophila persimilis]
Length = 422
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT- 217
TTL++G+L + + E EL D F +YG++ SI L+P + CAFV +R A A + N
Sbjct: 232 TTLYVGNLPEEITEPELRDQFYQYGEIRSIALVPRQQCAFVQYTKRSAAELAAERSFNKL 291
Query: 218 KLQGKTITLAWA 229
+ G+ +++ WA
Sbjct: 292 VIHGRKVSIKWA 303
>gi|27752871|gb|AAO19468.1| sex-lethal [Sciara ocellaris]
Length = 287
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR E + T L++ +L + + EE+L + FG+YG +V N++ PRG AF+ N
Sbjct: 149 ARPAGEELKETNLYVTNLPRTITEEQLDEIFGKYGLIVQKNILRDKMTGKPRGVAFIRYN 208
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G T+ +A GK
Sbjct: 209 KREEAQEAIAALNNVIPEGSNQPLTVRVAEEHGK 242
>gi|195353431|ref|XP_002043208.1| Sxl [Drosophila sechellia]
gi|194127306|gb|EDW49349.1| Sxl [Drosophila sechellia]
Length = 301
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 54/95 (56%), Gaps = 10/95 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 193 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 252
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGKG 233
+R++A +A+ L N +G ++ LA G+G
Sbjct: 253 KREEAQEAISALNNVIPEGGSQPLSVRLAEEHGQG 287
>gi|388500434|gb|AFK38283.1| unknown [Lotus japonicus]
Length = 273
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 42/78 (53%), Gaps = 6/78 (7%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMNRRQDAAKALYKL 214
L++G+LS V E L F EYG VV ++ RG FVC ++R + AL L
Sbjct: 194 LFVGNLSWTVTSESLIQVFQEYGTVVGARVLYDGETGRSRGYGFVCYSKRSELETALISL 253
Query: 215 KNTKLQGKTITLAWAPGK 232
N +L+G+ I ++ A GK
Sbjct: 254 NNVELEGRAIRVSLAEGK 271
>gi|195123969|ref|XP_002006474.1| GI21069 [Drosophila mojavensis]
gi|193911542|gb|EDW10409.1| GI21069 [Drosophila mojavensis]
Length = 936
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 131 FDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL 190
FD DPN +T L++G+L+ + E++L + FG YG + SI +
Sbjct: 186 FDTGDPN--------------------TTNLYLGNLNPKISEQQLMEIFGRYGPLASIKI 225
Query: 191 IPPRG---------CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+ PR C FV R+DA +AL L + G + L W
Sbjct: 226 MWPRSEEEKQRGRNCGFVAYMSRKDAERALRTLNGRYIMGYEMRLGWG 273
>gi|384244508|gb|EIE18010.1| hypothetical protein COCSUDRAFT_31894 [Coccomyxa subellipsoidea
C-169]
Length = 407
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 8/80 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLK-- 215
+TTL+IG LS V E++L FG +GD+V + P +GC FV +R A A+ +++
Sbjct: 226 NTTLFIGGLSSGVSEDDLRVLFGRFGDIVYTKIPPGKGCGFVQFVQRPAAESAMAQMQAR 285
Query: 216 ------NTKLQGKTITLAWA 229
L G TI ++W
Sbjct: 286 CSPSLFGQILGGSTIRISWG 305
>gi|195382900|ref|XP_002050166.1| GJ21992 [Drosophila virilis]
gi|194144963|gb|EDW61359.1| GJ21992 [Drosophila virilis]
Length = 910
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 131 FDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL 190
FD DPN +T L++G+L+ + E++L + FG YG + SI +
Sbjct: 184 FDTGDPN--------------------TTNLYLGNLNPKISEQQLMEIFGRYGPLASIKI 223
Query: 191 IPPRG---------CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+ PR C FV R+DA +AL L + G + L W
Sbjct: 224 MWPRSEEEKQRGRNCGFVAYMSRKDAERALRTLNGRYIMGYEMRLGWG 271
>gi|195027159|ref|XP_001986451.1| GH20523 [Drosophila grimshawi]
gi|193902451|gb|EDW01318.1| GH20523 [Drosophila grimshawi]
Length = 969
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 131 FDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL 190
FD DPN +T L++G+L+ + E++L + FG YG + SI +
Sbjct: 210 FDTGDPN--------------------TTNLYLGNLNPKISEQQLMEIFGRYGPLASIKI 249
Query: 191 IPPRG---------CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+ PR C FV R+DA +AL L + G + L W
Sbjct: 250 MWPRSEEEKQRGRNCGFVAYMSRKDAERALRTLNGRYIMGYEMRLGWG 297
>gi|193215305|ref|YP_001996504.1| RNP-1 like RNA-binding protein [Chloroherpeton thalassium ATCC
35110]
gi|193088782|gb|ACF14057.1| RNP-1 like RNA-binding protein [Chloroherpeton thalassium ATCC
35110]
Length = 104
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 6/76 (7%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMNRRQDAAKALYK 213
+++G+LS + E EL D F EYG+V S N+I RG FV M DA +A+
Sbjct: 2 NIYVGNLSYTLTENELRDVFSEYGEVASANIIVDKYSGKSRGFGFVDMPNEADAEQAIEA 61
Query: 214 LKNTKLQGKTITLAWA 229
L ++L G+++ + A
Sbjct: 62 LNGSQLDGRSLKVNEA 77
>gi|158828226|gb|ABW81104.1| unknown [Cleome spinosa]
Length = 504
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 46/86 (53%), Gaps = 1/86 (1%)
Query: 145 AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRR 204
E+ E+ TL++G L+ + E+++ D F YG++ SI ++P + CAFV R
Sbjct: 214 GEMGTLEAPEDESIKTLYVGGLNSRILEQDIRDQFYAYGEIESIRILPEKACAFVTYTTR 273
Query: 205 QDAAKALYKLKNT-KLQGKTITLAWA 229
+ A KA +L N + G+ + L W
Sbjct: 274 EGAEKATEELCNKLVVNGQRLKLTWG 299
>gi|357629028|gb|EHJ78065.1| putative RNA binding motif protein 22 [Danaus plexippus]
Length = 405
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 1/83 (1%)
Query: 154 ENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYK 213
E+ TTL+IG+L + + EEEL F +YG++ S+ L+P CAFV R A A K
Sbjct: 227 EDRTVTTLYIGNLPENITEEELRGHFYQYGEIRSLTLVPRAQCAFVQYTTRSAAEHAAEK 286
Query: 214 LKNT-KLQGKTITLAWAPGKGMK 235
N + G+ + + W +G +
Sbjct: 287 TFNRLVIAGRRLAIKWGKSQGRQ 309
>gi|317106693|dbj|BAJ53194.1| JHL03K20.3 [Jatropha curcas]
Length = 642
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 134 ADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSI----N 189
+ P P+ + A NG ST+L++G L + V E +L D F + G +VSI +
Sbjct: 6 SQPQGPVSAPVG--MASNGGNQFVSTSLYVGDLEQNVTETQLYDLFNQLGQIVSIRVCRD 63
Query: 190 LIPPR--GCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQD 247
L R G +V N DAA+AL L T + GK I + ++ ++D +
Sbjct: 64 LTSRRSLGYGYVNYNNVHDAAQALEVLNFTPVNGKPIRIMYS---------YRDPTIRKS 114
Query: 248 GVSYIPYDRLSKEIDYDYLED 268
G I L K ID L D
Sbjct: 115 GAGNIYIKNLDKAIDNKALHD 135
>gi|194763735|ref|XP_001963988.1| GF20968 [Drosophila ananassae]
gi|190618913|gb|EDV34437.1| GF20968 [Drosophila ananassae]
Length = 379
Score = 53.9 bits (128), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 204 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 263
Query: 203 RRQDAAKALYKLKNTKLQGKTITLA 227
+R++A +A+ L N +G + L+
Sbjct: 264 KREEAQEAISALNNVIPEGGSQPLS 288
>gi|194896665|ref|XP_001978518.1| GG17637 [Drosophila erecta]
gi|195480535|ref|XP_002101294.1| GE17544 [Drosophila yakuba]
gi|190650167|gb|EDV47445.1| GG17637 [Drosophila erecta]
gi|194188818|gb|EDX02402.1| GE17544 [Drosophila yakuba]
Length = 335
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 161 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 220
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G ++ LA GK
Sbjct: 221 KREEAQEAISALNNVIPEGGSQPLSVRLAEEHGK 254
>gi|442615379|ref|NP_727161.3| Sex lethal, isoform W [Drosophila melanogaster]
gi|324096522|gb|ADY17790.1| RE26226p [Drosophila melanogaster]
gi|440216502|gb|AAF46241.4| Sex lethal, isoform W [Drosophila melanogaster]
Length = 344
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 193 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 252
Query: 203 RRQDAAKALYKLKNTKLQGKTITLA 227
+R++A +A+ L N +G + L+
Sbjct: 253 KREEAQEAISALNNVIPEGGSQPLS 277
>gi|224078632|ref|XP_002305583.1| predicted protein [Populus trichocarpa]
gi|222848547|gb|EEE86094.1| predicted protein [Populus trichocarpa]
Length = 382
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G+L V ++ L + FG+YG ++ + + + C FV R A +AL L
Sbjct: 248 NTTIFVGNLDSNVMDDHLKELFGQYGQLLHVKIPAGKRCGFVQFADRSSAEEALKMLNGA 307
Query: 218 KLQGKTITLAWA 229
+L G+ I L+W
Sbjct: 308 QLSGQNIRLSWG 319
>gi|383857285|ref|XP_003704135.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Megachile
rotundata]
Length = 412
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 140 IHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFV 199
+ R A + + E+ TTL+IG+L ++ E++L D F +YG++ SI ++P + CAF+
Sbjct: 213 LMRRAAAMPKLDPPEDKSITTLYIGNLGDVLTEKQLRDHFYQYGEIRSITMVPRQQCAFI 272
Query: 200 CMNRRQDAAKALYKLKNTK-LQGKTITLAWAPGKG 233
+R A A + N L G+ +T+ W +G
Sbjct: 273 QYTQRSAAEAAAERTFNKLILGGRRLTIKWGRSQG 307
>gi|222641726|gb|EEE69858.1| hypothetical protein OsJ_29658 [Oryza sativa Japonica Group]
Length = 310
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++ +TT+++G L V E++L TF +YG++ S+ + + C FV +R++A AL L
Sbjct: 175 DLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGL 234
Query: 215 KNTKLQGKTITLAWA 229
+ + +T+ L+W
Sbjct: 235 NGSTIGKQTVRLSWG 249
>gi|78706524|ref|NP_001027063.1| Sex lethal, isoform N [Drosophila melanogaster]
gi|78707532|ref|NP_524791.3| Sex lethal, isoform C [Drosophila melanogaster]
gi|22831873|gb|AAN09197.1| Sex lethal, isoform C [Drosophila melanogaster]
gi|71854532|gb|AAZ52510.1| Sex lethal, isoform N [Drosophila melanogaster]
gi|317453674|gb|ADV19045.1| RE22452p [Drosophila melanogaster]
Length = 344
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 191 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 250
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G ++ LA GK
Sbjct: 251 KREEAQEAISALNNVIPEGGSQPLSVRLAEEHGK 284
>gi|78710143|ref|NP_727164.2| Sex lethal, isoform H [Drosophila melanogaster]
gi|22831872|gb|AAF46240.2| Sex lethal, isoform H [Drosophila melanogaster]
Length = 366
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 193 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 252
Query: 203 RRQDAAKALYKLKNTKLQGKTITLA 227
+R++A +A+ L N +G + L+
Sbjct: 253 KREEAQEAISALNNVIPEGGSQPLS 277
>gi|195455607|ref|XP_002074793.1| GK22959 [Drosophila willistoni]
gi|194170878|gb|EDW85779.1| GK22959 [Drosophila willistoni]
Length = 929
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 131 FDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL 190
FD DPN +T L++G+L+ + E++L + FG YG + SI +
Sbjct: 212 FDTGDPN--------------------TTNLYLGNLNPKISEQQLMEIFGRYGPLASIKI 251
Query: 191 IPPRG---------CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+ PR C FV R+DA +AL L + G + L W
Sbjct: 252 MWPRSEEEKQRGRNCGFVAYMSRKDAERALRTLNGRYVMGYEMRLGWG 299
>gi|195486673|ref|XP_002091605.1| GE12157 [Drosophila yakuba]
gi|194177706|gb|EDW91317.1| GE12157 [Drosophila yakuba]
Length = 960
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 131 FDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL 190
FD DPN +T L++G+L+ + E++L + FG YG + SI +
Sbjct: 207 FDTGDPN--------------------TTNLYLGNLNPKISEQQLMEIFGRYGPLASIKI 246
Query: 191 IPPRG---------CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+ PR C FV R+DA +AL L + G + L W
Sbjct: 247 MWPRSEEEKQRGRNCGFVAYMSRKDAERALRTLNGRYIMGYEMRLGWG 294
>gi|50725189|dbj|BAD33940.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
gi|51535291|dbj|BAD38554.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
Length = 316
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++ +TT+++G L V E++L TF +YG++ S+ + + C FV +R++A AL L
Sbjct: 181 DLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGL 240
Query: 215 KNTKLQGKTITLAWA 229
+ + +T+ L+W
Sbjct: 241 NGSTIGKQTVRLSWG 255
>gi|116788528|gb|ABK24911.1| unknown [Picea sitchensis]
Length = 397
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L +E+L FG +G++V + + +GC FV R A +AL KL T
Sbjct: 262 NTTIFVGGLDPNATDEDLRQVFGPFGEIVYVKIPVGKGCGFVQFTNRSSAEEALQKLHGT 321
Query: 218 KLQGKTITLAWA 229
+ ++I L+W
Sbjct: 322 IIGQQSIRLSWG 333
>gi|195439114|ref|XP_002067476.1| GK16445 [Drosophila willistoni]
gi|194163561|gb|EDW78462.1| GK16445 [Drosophila willistoni]
Length = 373
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 197 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 256
Query: 203 RRQDAAKALYKLKNTKLQGKTITLA 227
+R++A +A+ L N +G + L+
Sbjct: 257 KREEAQEAISALNNVIPEGGSQPLS 281
>gi|103381|pir||B39725 sex-lethal sex determination protein MS11 - fruit fly (Drosophila
melanogaster)
gi|158523|gb|AAA28921.1| putative [Drosophila melanogaster]
Length = 366
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 193 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 252
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G ++ LA GK
Sbjct: 253 KREEAQEAISALNNVIPEGGSQPLSVRLAEEHGK 286
>gi|83283985|gb|ABC01900.1| RRM-containing RNA-binding protein-like protein [Solanum tuberosum]
Length = 487
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT-K 218
TL++G + + E++L D F +G++ SI ++ RGCAFV R+ A KA +L N
Sbjct: 229 TLYVGGVDARISEQDLRDQFYAHGEIESIKMVLQRGCAFVTYTTREGAVKAAEELANKLV 288
Query: 219 LQGKTITLAWA-PGKGMKDKDWKDFWEVQDGVSY 251
++G + L W P D + D Q V++
Sbjct: 289 IKGLRLKLLWGRPQAPKPDTELSDEARQQAAVTH 322
>gi|194881758|ref|XP_001974988.1| GG22076 [Drosophila erecta]
gi|190658175|gb|EDV55388.1| GG22076 [Drosophila erecta]
Length = 960
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 131 FDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL 190
FD DPN +T L++G+L+ + E++L + FG YG + SI +
Sbjct: 207 FDTGDPN--------------------TTNLYLGNLNPKISEQQLMEIFGRYGPLASIKI 246
Query: 191 IPPRG---------CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+ PR C FV R+DA +AL L + G + L W
Sbjct: 247 MWPRSEEEKQRGRNCGFVAYMSRKDAERALRTLNGRYIMGYEMRLGWG 294
>gi|385302315|gb|EIF46452.1| mrna binding post-transcriptional regulator [Dekkera bruxellensis
AWRI1499]
Length = 207
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 51/90 (56%), Gaps = 2/90 (2%)
Query: 151 NGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKA 210
+G ++ +TT+++G ++ V E+ L F +GD+V++ + P +GC FV + A +A
Sbjct: 56 SGGQDPNNTTVFVGGINSSVSEDALRSLFDPFGDIVNVCVPPGKGCGFVRFTTHESAQQA 115
Query: 211 LYKLKNTKLQGKTITLAWAPGKGMKDKDWK 240
+ +++ L G I L W G+ + + W+
Sbjct: 116 VNEMQGFVLGGSRIRLRW--GRSGQRRQWR 143
>gi|324507975|gb|ADY43373.1| Nucleolysin TIAR [Ascaris suum]
Length = 290
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 46/72 (63%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+T+++IG++++ V +E+L F ++G +V + + +G AFV +++ A A+ K+ T
Sbjct: 136 NTSVYIGNVNQSVNDEDLRAAFDKFGRIVEVRIFKTQGFAFVRFDKKDSACNAIVKMNGT 195
Query: 218 KLQGKTITLAWA 229
++ G+T+ +W
Sbjct: 196 EIGGQTVKCSWG 207
Score = 38.1 bits (87), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMNRRQDAAKALYKL 214
++IG LS V + L D F +G+V +I +G FV +R++A +A+ ++
Sbjct: 33 VFIGDLSPEVDNKALKDAFAPFGEVSDAKVIRDSTTLKSKGYGFVSYPKREEAERAIEQM 92
Query: 215 KNTKLQGKTITLAWAPGK 232
L +TI WA K
Sbjct: 93 NGQWLGRRTIRTNWATRK 110
>gi|195585268|ref|XP_002082411.1| GD11555 [Drosophila simulans]
gi|194194420|gb|EDX07996.1| GD11555 [Drosophila simulans]
Length = 989
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 131 FDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL 190
FD DPN +T L++G+L+ + E++L + FG YG + SI +
Sbjct: 207 FDTGDPN--------------------TTNLYLGNLNPKISEQQLMEIFGRYGPLASIKI 246
Query: 191 IPPRG---------CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+ PR C FV R+DA +AL L + G + L W
Sbjct: 247 MWPRSEEEKQRGRNCGFVAYMSRKDAERALKTLNGRYIMGYEMRLGWG 294
>gi|451993069|gb|EMD85544.1| hypothetical protein COCHEDRAFT_1035442 [Cochliobolus
heterostrophus C5]
Length = 409
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 130 LFDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSIN 189
++ M P P+ Q N + +TT+++G LS V E+EL F +G++ +
Sbjct: 265 MYSMGAP--PMGNYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVK 322
Query: 190 LIPPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+ P +GC FV +R A A+ +++ + + L+W
Sbjct: 323 IPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 362
>gi|170584256|ref|XP_001896921.1| Rbm22 protein [Brugia malayi]
gi|158595698|gb|EDP34229.1| Rbm22 protein, putative [Brugia malayi]
Length = 400
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 53/99 (53%), Gaps = 3/99 (3%)
Query: 154 ENMCSTTLWIGHL--SKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKAL 211
E+ TTL++G L + ++ E L D F ++G++ S+NL+P +GCAF+ R A KA
Sbjct: 222 EDTTITTLYVGDLGPAGMIGEVALRDYFYQFGEIRSLNLLPNKGCAFISFTTRLAAEKAA 281
Query: 212 YKLKNTK-LQGKTITLAWAPGKGMKDKDWKDFWEVQDGV 249
+ N LQG+ + + W + ++ K E G+
Sbjct: 282 ERSFNKLILQGRRLKIRWGRPQAQNTQEEKKRAEPVAGL 320
>gi|390361169|ref|XP_003729862.1| PREDICTED: LOW QUALITY PROTEIN: pre-mRNA-splicing factor RBM22-like
[Strongylocentrotus purpuratus]
Length = 483
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 51/105 (48%), Gaps = 6/105 (5%)
Query: 140 IHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFV 199
+ R A + E+ TTL++G L V EE+L F ++G++ SIN++P + CAFV
Sbjct: 213 LMRRAAAMPKLEAPEDRMITTLYVGGLGDKVTEEDLKGHFYQFGELRSINVVPKQQCAFV 272
Query: 200 CMNRRQDAAKAL-YKLKNTKLQGKTITLAWAP-----GKGMKDKD 238
RQ A A + + G+ + + W G G K+ D
Sbjct: 273 TFTNRQGAEXAAENSFQKLIIXGRMLNIKWGKPQAQLGSGKKEDD 317
>gi|281359983|ref|NP_001162688.1| Sex lethal, isoform R [Drosophila melanogaster]
gi|272506011|gb|ACZ95224.1| Sex lethal, isoform R [Drosophila melanogaster]
Length = 342
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 191 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 250
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G ++ LA GK
Sbjct: 251 KREEAQEAISALNNVIPEGGSQPLSVRLAEEHGK 284
>gi|19922658|ref|NP_611535.1| CG9346 [Drosophila melanogaster]
gi|7291222|gb|AAF46654.1| CG9346 [Drosophila melanogaster]
gi|220947134|gb|ACL86110.1| CG9346-PA [synthetic construct]
gi|220956694|gb|ACL90890.1| CG9346-PA [synthetic construct]
Length = 957
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 131 FDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL 190
FD DPN +T L++G+L+ + E++L + FG YG + SI +
Sbjct: 207 FDTGDPN--------------------TTNLYLGNLNPKISEQQLMEIFGRYGPLASIKI 246
Query: 191 IPPRG---------CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+ PR C FV R+DA +AL L + G + L W
Sbjct: 247 MWPRSEEEKQRGRNCGFVAYMSRKDAERALKTLNGRYIMGYEMRLGWG 294
>gi|195346271|ref|XP_002039689.1| GM15794 [Drosophila sechellia]
gi|194135038|gb|EDW56554.1| GM15794 [Drosophila sechellia]
Length = 957
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 131 FDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL 190
FD DPN +T L++G+L+ + E++L + FG YG + SI +
Sbjct: 207 FDTGDPN--------------------TTNLYLGNLNPKISEQQLMEIFGRYGPLASIKI 246
Query: 191 IPPRG---------CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+ PR C FV R+DA +AL L + G + L W
Sbjct: 247 MWPRSEEEKQRGRNCGFVAYMSRKDAERALKTLNGRYIMGYEMRLGWG 294
>gi|195396313|ref|XP_002056776.1| Sex lethal [Drosophila virilis]
gi|194146543|gb|EDW62262.1| Sex lethal [Drosophila virilis]
Length = 368
Score = 53.5 bits (127), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 194 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 253
Query: 203 RRQDAAKALYKLKNTKLQGKTITLA 227
+R++A +A+ L N +G + L+
Sbjct: 254 KREEAQEAISALNNVIPEGGSQPLS 278
>gi|27819958|gb|AAL39666.2| LD23810p, partial [Drosophila melanogaster]
Length = 958
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 131 FDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL 190
FD DPN +T L++G+L+ + E++L + FG YG + SI +
Sbjct: 208 FDTGDPN--------------------TTNLYLGNLNPKISEQQLMEIFGRYGPLASIKI 247
Query: 191 IPPRG---------CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+ PR C FV R+DA +AL L + G + L W
Sbjct: 248 MWPRSEEEKQRGRNCGFVAYMSRKDAERALKTLNGRYIMGYEMRLGWG 295
>gi|78706522|ref|NP_001027062.1| Sex lethal, isoform O [Drosophila melanogaster]
gi|71854531|gb|AAZ52509.1| Sex lethal, isoform O [Drosophila melanogaster]
Length = 364
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 191 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 250
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G ++ LA GK
Sbjct: 251 KREEAQEAISALNNVIPEGGSQPLSVRLAEEHGK 284
>gi|296422257|ref|XP_002840678.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636899|emb|CAZ84869.1| unnamed protein product [Tuber melanosporum]
Length = 733
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 16/141 (11%)
Query: 3 VIKTFNQELSSLYDTKPP-ISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVP 61
V+ L ++ TK P +S KI IT ++R ++ ++Q V KC +K+
Sbjct: 4 VVTELENALQAMQATKAPGVSGTKINQITELSLRNVQSESVIIQKVYTHFKKCPGTHKLG 63
Query: 62 ALYVIDSLVRQSRHQFQ----------DKDVFGPRFAR--NLKATFQH--LYQCPP-EDK 106
LYV+DS+ R+ Q + FG R NL + L PP E+K
Sbjct: 64 PLYVVDSIARKYLEQAKRLHEPVSHAAPDGTFGAGVHRITNLLPALMNDILQNAPPEENK 123
Query: 107 SKIIRVLNLWQKNEVFTPDII 127
KI +++ +W+++ F P+++
Sbjct: 124 DKIDKLVTIWERSSTFPPEVL 144
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 67/142 (47%), Gaps = 13/142 (9%)
Query: 134 ADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPP 193
A P P H E N ++ + S TL++G ++ + ++EL F ++G V S +
Sbjct: 480 ALPKFPKHVEFDPTIGPNNIK-VLSRTLFVGGVT--ITDDELRKLFEKHGYVQSCIVNQE 536
Query: 194 RGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIP 253
+ AF+ M RQDA KA ++ + TI W G G +D D+ Q G+S IP
Sbjct: 537 KRHAFIKMLTRQDAVKARQGMETYRADNMTIRTRW--GVGYGPRDCSDY---QTGISVIP 591
Query: 254 YDRLSKE-----IDYDYLEDGG 270
DRL+ + +Y GG
Sbjct: 592 IDRLTDADQRWMVSAEYGGTGG 613
>gi|194754789|ref|XP_001959677.1| GF11923 [Drosophila ananassae]
gi|190620975|gb|EDV36499.1| GF11923 [Drosophila ananassae]
Length = 963
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 131 FDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL 190
FD DPN +T L++G+L+ + E++L + FG YG + SI +
Sbjct: 214 FDTGDPN--------------------TTNLYLGNLNPKISEQQLMEIFGRYGPLASIKI 253
Query: 191 IPPRG---------CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+ PR C FV R+DA +AL L + G + L W
Sbjct: 254 MWPRSEEEKQRGRNCGFVAYMSRKDAERALRALNCRYIMGNKMQLGWG 301
>gi|115479619|ref|NP_001063403.1| Os09g0462700 [Oryza sativa Japonica Group]
gi|113631636|dbj|BAF25317.1| Os09g0462700, partial [Oryza sativa Japonica Group]
Length = 441
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++ +TT+++G L V E++L TF +YG++ S+ + + C FV +R++A AL L
Sbjct: 306 DLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGL 365
Query: 215 KNTKLQGKTITLAWA 229
+ + +T+ L+W
Sbjct: 366 NGSTIGKQTVRLSWG 380
>gi|401399032|ref|XP_003880458.1| hypothetical protein NCLIV_008920 [Neospora caninum Liverpool]
gi|325114868|emb|CBZ50424.1| hypothetical protein NCLIV_008920 [Neospora caninum Liverpool]
Length = 400
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 4/100 (4%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL-KN 216
+TT+++G L+K V E++L D F +G+++SI + + AF+C R A +A+ +L N
Sbjct: 232 NTTVFVGGLTKGVTEQDLRDAFYAFGELLSIKMYRGQQYAFLCYAERSSAEEAVKQLHSN 291
Query: 217 TKLQGKTITLAWA-PGKGMKDKDWKDFWEVQD--GVSYIP 253
++G + +AWA P K D D Q GV+ IP
Sbjct: 292 LVIKGVRLRVAWAKPSDKRKKPDDNDLPAAQADLGVTVIP 331
>gi|307181748|gb|EFN69209.1| Pre-mRNA-splicing factor RBM22 [Camponotus floridanus]
Length = 411
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 140 IHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFV 199
+ R A + + E+ TTL+IG+L ++ E++L D F +YG++ S+ ++P + CAF+
Sbjct: 213 LMRRAAAMPKLDPPEDKSITTLYIGNLGDILTEKQLRDHFYQYGEIRSVTMVPRQQCAFI 272
Query: 200 CMNRRQDAAKALYKLKNTK-LQGKTITLAWAPGKG 233
+R A A + N L G+ +T+ W +G
Sbjct: 273 QYTQRNAAEAAAERTFNKLILGGRRLTIKWGRSQG 307
>gi|215765810|dbj|BAG87507.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 345
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++ +TT+++G L V E++L TF +YG++ S+ + + C FV +R++A AL L
Sbjct: 210 DLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGL 269
Query: 215 KNTKLQGKTITLAWA 229
+ + +T+ L+W
Sbjct: 270 NGSTIGKQTVRLSWG 284
>gi|195168643|ref|XP_002025140.1| GL26885 [Drosophila persimilis]
gi|198471287|ref|XP_002133706.1| GA22653 [Drosophila pseudoobscura pseudoobscura]
gi|194108585|gb|EDW30628.1| GL26885 [Drosophila persimilis]
gi|198145851|gb|EDY72333.1| GA22653 [Drosophila pseudoobscura pseudoobscura]
Length = 377
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 203 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 262
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G ++ LA GK
Sbjct: 263 KREEAQEAISALNNVIPEGGSQPLSVRLAEEHGK 296
>gi|194334049|ref|YP_002015909.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM 271]
gi|194311867|gb|ACF46262.1| RNP-1 like RNA-binding protein [Prosthecochloris aestuarii DSM 271]
Length = 90
Score = 53.5 bits (127), Expect = 1e-04, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 43/72 (59%), Gaps = 6/72 (8%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMNRRQDAAKALYKL 214
++IG+L V EE+L + FGE+GDV S N+I +G FV M+ DA +A+ L
Sbjct: 3 IYIGNLDYGVTEEDLREAFGEFGDVSSANIITDKFTGRSKGFGFVEMSSSDDANEAIESL 62
Query: 215 KNTKLQGKTITL 226
+T L G+TI +
Sbjct: 63 NDTDLNGRTIKV 74
>gi|451846221|gb|EMD59531.1| hypothetical protein COCSADRAFT_251085 [Cochliobolus sativus
ND90Pr]
Length = 406
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 2/100 (2%)
Query: 130 LFDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSIN 189
++ M P P+ Q N + +TT+++G LS V E+EL F +G++ +
Sbjct: 262 MYSMGAP--PMGNYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVK 319
Query: 190 LIPPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+ P +GC FV +R A A+ +++ + + L+W
Sbjct: 320 IPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 359
>gi|294463675|gb|ADE77364.1| unknown [Picea sitchensis]
Length = 253
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 43/72 (59%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V +E+L FG++G++V + + +GC FV R A +AL ++ T
Sbjct: 57 NTTIFVGGLDPTVSDEDLRQIFGQFGELVYVKIPVNKGCGFVQFGNRACAEEALQRVHGT 116
Query: 218 KLQGKTITLAWA 229
+ +T+ L+W
Sbjct: 117 VIGQQTVRLSWG 128
>gi|189195244|ref|XP_001933960.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187979839|gb|EDU46465.1| conserved hypothetical protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 751
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 1 MDVIKTFNQELSSLYDTKPP-ISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYK 59
M + +L SL KPP ++ KI AIT+ + I+ + +VQ + + +K
Sbjct: 1 MAAMDELGTQLQSLQALKPPGVTPTKIKAITQLCVDNIQSHSIIVQKIANQLQNSVATHK 60
Query: 60 VPALYVIDSLVRQ------------SRHQFQDKDVFGPRFARN-LKATFQHLYQCPPE-D 105
+ LYV+D++ RQ S++ Q G + R+ L A +L P+
Sbjct: 61 LGVLYVVDAVARQWVEKAKQAGQTVSKNAAQGTYASGVQMMRDVLPAMMDNLINAAPDTQ 120
Query: 106 KSKIIRVLNLWQKNEVFTPDII 127
K KI ++L++W++ + F+ D++
Sbjct: 121 KEKISKLLDIWERGQTFSLDML 142
>gi|294947232|ref|XP_002785285.1| pre-mRNA-splicing factor srp1, putative [Perkinsus marinus ATCC
50983]
gi|239899058|gb|EER17081.1| pre-mRNA-splicing factor srp1, putative [Perkinsus marinus ATCC
50983]
Length = 123
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTK 218
TL++G++S E ++ D F EYG V+ + P + FV +R +DA A + K
Sbjct: 5 NTLYVGNISSRTTERDIRDEFSEYGRVIRCYMPPGKNICFVEYDRERDAEDAHRGMSRAK 64
Query: 219 LQGKTITLAWA 229
+ G ++T+ WA
Sbjct: 65 IGGVSVTVEWA 75
>gi|347970878|ref|XP_003436655.1| AGAP003899-PB [Anopheles gambiae str. PEST]
gi|333466414|gb|EGK96234.1| AGAP003899-PB [Anopheles gambiae str. PEST]
Length = 280
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR +++ T L+I +L + + EE+L FG+YG +V N++ PRG AFV N
Sbjct: 159 ARPQSDDIKETNLYITNLPRTITEEQLDIIFGKYGTIVQKNILRDKLTGQPRGVAFVRFN 218
Query: 203 RRQDAAKALYKLKNTKLQG 221
+R++A +A+ L N QG
Sbjct: 219 KREEAQEAISALNNVIPQG 237
>gi|390354454|ref|XP_791429.3| PREDICTED: uncharacterized protein LOC586560 [Strongylocentrotus
purpuratus]
Length = 365
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/69 (39%), Positives = 42/69 (60%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKL 219
+LWIG+L V E+EL D F YG+V S+ + + CAFV + A+KA+ KL+ +L
Sbjct: 195 SLWIGNLQPTVTEKELKDLFKPYGEVSSMRRMSEKFCAFVNYKDPRMASKAMDKLQGREL 254
Query: 220 QGKTITLAW 228
GK + + +
Sbjct: 255 HGKFLLIKF 263
>gi|323301216|gb|ADX35950.1| SD08075p [Drosophila melanogaster]
Length = 322
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 169 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGPIVQKNILRDKLTGRPRGVAFVRYN 228
Query: 203 RRQDAAKALYKLKNTKLQGKTITLA 227
+R++A +A+ L N +G + L+
Sbjct: 229 KREEAQEAISALNNVIPEGGSQPLS 253
>gi|195132500|ref|XP_002010681.1| GI21573 [Drosophila mojavensis]
gi|193907469|gb|EDW06336.1| GI21573 [Drosophila mojavensis]
Length = 367
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 193 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 252
Query: 203 RRQDAAKALYKLKNTKLQGKTITLA 227
+R++A +A+ L N +G + L+
Sbjct: 253 KREEAQEAISALNNVIPEGGSQPLS 277
>gi|195048229|ref|XP_001992493.1| GH24172 [Drosophila grimshawi]
gi|193893334|gb|EDV92200.1| GH24172 [Drosophila grimshawi]
Length = 365
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 193 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 252
Query: 203 RRQDAAKALYKLKNTKLQGK----TITLAWAPGK 232
+R++A +A+ L N +G ++ LA GK
Sbjct: 253 KREEAQEAISALNNVIPEGGSQPLSVRLAEEHGK 286
>gi|350295821|gb|EGZ76798.1| RNA-binding domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 523
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%)
Query: 136 PNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG 195
P P + +Q N + +TT+++G LS V E+EL F +G++ + + P +G
Sbjct: 281 PPQPYYSGFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKG 340
Query: 196 CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
C FV R A A+ +++ + + L+W
Sbjct: 341 CGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 374
>gi|224115306|ref|XP_002316998.1| predicted protein [Populus trichocarpa]
gi|222860063|gb|EEE97610.1| predicted protein [Populus trichocarpa]
Length = 403
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q G + +TT+++G L V ++ L F +YG++V + + + C FV R A
Sbjct: 258 QGNQGENDPNNTTIFVGALDPSVTDDTLRAVFSKYGELVHVKIPAGKRCGFVQFANRTSA 317
Query: 208 AKALYKLKNTKLQGKTITLAWA 229
+AL L T++ G+ I L+W
Sbjct: 318 EQALSMLNGTQIAGQNIRLSWG 339
>gi|317106694|dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas]
Length = 642
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 58/124 (46%), Gaps = 15/124 (12%)
Query: 151 NGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSI----NLIPPR--GCAFVCMNRR 204
NGV T+L++G L + V E +L D F ++G VVSI +L R G +V N
Sbjct: 21 NGVNQFVPTSLYVGDLEQNVTETQLYDLFNQHGQVVSIRVCRDLTSRRSLGYGYVNYNNV 80
Query: 205 QDAAKALYKLKNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYD 264
DAA+A+ L T + GK I + ++ ++D + G I L K ID
Sbjct: 81 HDAAQAIEVLNFTPVNGKPIRIMYS---------YRDPTIRKSGTGNIYIKNLDKAIDNK 131
Query: 265 YLED 268
L D
Sbjct: 132 ALHD 135
>gi|356553476|ref|XP_003545082.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Glycine max]
Length = 482
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Query: 145 AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRR 204
E+ E+ TL++G L V E++L D F +G++ SI ++ R CAFV R
Sbjct: 214 GEMNTLEAPEDESIKTLYVGGLDARVTEQDLRDHFYAHGEIESIKMVLQRACAFVTYTTR 273
Query: 205 QDAAKALYKLKNT-KLQGKTITLAWA-PGKGMKDKDWKDFWEVQDGVSY 251
+ A KA +L N ++G + L W P + D D Q V++
Sbjct: 274 EGAEKAAEELSNKLVIKGLRLKLMWGRPQTSKPESDGSDQARQQASVAH 322
>gi|332028626|gb|EGI68661.1| Pre-mRNA-splicing factor RBM22 [Acromyrmex echinatior]
Length = 392
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 140 IHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFV 199
+ R A + + E+ TTL+IG+L ++ E++L D F +YG++ S+ ++P + CAF+
Sbjct: 177 LMRRAAAMPKLDPPEDKSITTLYIGNLGDVLTEKQLRDHFYQYGEIRSVTMVPRQQCAFI 236
Query: 200 CMNRRQDAAKALYKLKNTK-LQGKTITLAWAPGKG 233
+R A A + N L G+ +T+ W +G
Sbjct: 237 QYTQRSAAEAAAERTFNKLILGGRRLTIKWGRSQG 271
>gi|336463751|gb|EGO51991.1| hypothetical protein NEUTE1DRAFT_149626 [Neurospora tetrasperma
FGSC 2508]
Length = 491
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%)
Query: 136 PNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG 195
P P + +Q N + +TT+++G LS V E+EL F +G++ + + P +G
Sbjct: 249 PPQPYYSGFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKG 308
Query: 196 CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
C FV R A A+ +++ + + L+W
Sbjct: 309 CGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 342
>gi|409079460|gb|EKM79821.1| hypothetical protein AGABI1DRAFT_57019, partial [Agaricus bisporus
var. burnettii JB137-S8]
Length = 366
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS L+ EE L F +GD+ + + + C FV R+ DA +A+ K++
Sbjct: 229 NTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKMQGF 288
Query: 218 KLQGKTITLAWA 229
+ G I L+W
Sbjct: 289 PIGGSRIRLSWG 300
>gi|302808804|ref|XP_002986096.1| hypothetical protein SELMODRAFT_425040 [Selaginella moellendorffii]
gi|300146244|gb|EFJ12915.1| hypothetical protein SELMODRAFT_425040 [Selaginella moellendorffii]
Length = 398
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 33/55 (60%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
TL++G L + V E+L D F YG + S+ L+P R CAF+ R+DA KA L
Sbjct: 100 TLYVGGLDERVTTEDLKDNFYSYGKIESLRLVPQRACAFITYTTREDAEKAAEDL 154
>gi|400594253|gb|EJP62109.1| NRD1 protein [Beauveria bassiana ARSEF 2860]
Length = 684
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 11 LSSLYDTKPP-ISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSL 69
L ++ + KPP +S ++IT++T + I+ ++Q + K +K+ LYV+DS+
Sbjct: 12 LQAMLNLKPPGVSGSRITSLTSLCVTNIQSESVLIQKIYTHFKKTPGTHKLGVLYVVDSV 71
Query: 70 VR----QSRHQFQDKDVFGP---------RFARNLKATFQHLYQCPPED-KSKIIRVLNL 115
R Q++ Q Q + P R + + Q PED K KI ++L++
Sbjct: 72 TRKWLEQAKAQGQPINSSAPDGTYAAGVHRVTELMPVLMNDISQSAPEDQKEKIKKLLDI 131
Query: 116 WQKNEVFTPDII 127
W+K + F P ++
Sbjct: 132 WEKGQTFPPSML 143
>gi|297849030|ref|XP_002892396.1| hypothetical protein ARALYDRAFT_470757 [Arabidopsis lyrata subsp.
lyrata]
gi|297338238|gb|EFH68655.1| hypothetical protein ARALYDRAFT_470757 [Arabidopsis lyrata subsp.
lyrata]
Length = 481
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT-K 218
TL++G L+ + E+++ D F YG++ SI ++ + CAFV R+ A KA +L N
Sbjct: 229 TLYVGGLNSRILEQDIRDQFYAYGEIESIRILADKACAFVTYTSREGAEKAAQELANRLV 288
Query: 219 LQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSY 251
+ G+ + L W G+ D+D + Q GV++
Sbjct: 289 VNGQRLKLTW--GRPKPDQDGSN---QQGGVAH 316
>gi|356574477|ref|XP_003555373.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Glycine max]
Length = 481
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Query: 145 AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRR 204
E+ E+ TL++G L V E++L D F +G++ SI ++ R CAFV R
Sbjct: 214 GEMSTLEAPEDESIKTLYVGGLDARVTEQDLRDHFYAHGEIESIKMVLQRACAFVTYTTR 273
Query: 205 QDAAKALYKLKNT-KLQGKTITLAWA-PGKGMKDKDWKDFWEVQDGVSY 251
+ A KA +L N ++G + L W P + D D Q V++
Sbjct: 274 EGAEKAAEELSNKLVIKGLRLKLMWGRPQTSKPESDGSDQARPQASVAH 322
>gi|85115744|ref|XP_964924.1| hypothetical protein NCU00768 [Neurospora crassa OR74A]
gi|28926722|gb|EAA35688.1| conserved hypothetical protein [Neurospora crassa OR74A]
gi|38636412|emb|CAE81949.1| related to polyadenylate-binding protein [Neurospora crassa]
Length = 491
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%)
Query: 136 PNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG 195
P P + +Q N + +TT+++G LS V E+EL F +G++ + + P +G
Sbjct: 249 PPQPYYSGFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKG 308
Query: 196 CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
C FV R A A+ +++ + + L+W
Sbjct: 309 CGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 342
>gi|442615389|ref|NP_001259304.1| Sex lethal, isoform Y [Drosophila melanogaster]
gi|440216504|gb|AGB95149.1| Sex lethal, isoform Y [Drosophila melanogaster]
Length = 708
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 201 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 260
Query: 203 RRQDAAKALYKLKNTKLQGKTITLA 227
+R++A +A+ L N +G + L+
Sbjct: 261 KREEAQEAISALNNVIPEGGSQPLS 285
>gi|218197672|gb|EEC80099.1| hypothetical protein OsI_21840 [Oryza sativa Indica Group]
Length = 617
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKL 219
TL+IG L+ + E++L D F +G++ SI ++ R CAFV R+ A KA +L N KL
Sbjct: 361 TLYIGGLNNRITEQDLRDQFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEELAN-KL 419
Query: 220 QGKTITLAWAPGKGMKDKDWKDFWEVQDGVSY---IPYDRLSKEIDYDYLEDGGVFDEDT 276
K I L GK K +D Q V++ +P +S++ D + G +
Sbjct: 420 VIKGIRLKLMWGKPQAPKPEEDEAGRQGHVAHGGMLPRAVISQQQSGDQPQPPGTEGQQQ 479
Query: 277 VP 278
P
Sbjct: 480 AP 481
>gi|82400164|gb|ABB72821.1| RRM-containing RNA-binding protein-like protein [Solanum tuberosum]
Length = 462
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 2/94 (2%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT-K 218
TL++G + + E++L D F +G++ SI ++ RGCAFV R+ A KA +L N
Sbjct: 229 TLYVGGVDARISEQDLRDQFYAHGEIESIKMVLQRGCAFVTYTTREGAVKAAEELANKLV 288
Query: 219 LQGKTITLAWA-PGKGMKDKDWKDFWEVQDGVSY 251
++G + L W P D + D Q V++
Sbjct: 289 IKGLRLKLLWGRPQAPKPDTELSDEARQQAAVTH 322
>gi|158285093|ref|XP_560351.3| AGAP003899-PA [Anopheles gambiae str. PEST]
gi|98986313|tpe|CAJ55784.1| TPA: sex-lethal [Anopheles gambiae]
gi|157020733|gb|EAL41988.3| AGAP003899-PA [Anopheles gambiae str. PEST]
Length = 302
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR +++ T L+I +L + + EE+L FG+YG +V N++ PRG AFV N
Sbjct: 181 ARPQSDDIKETNLYITNLPRTITEEQLDIIFGKYGTIVQKNILRDKLTGQPRGVAFVRFN 240
Query: 203 RRQDAAKALYKLKNTKLQG 221
+R++A +A+ L N QG
Sbjct: 241 KREEAQEAISALNNVIPQG 259
>gi|401404962|ref|XP_003881931.1| hypothetical protein NCLIV_016900 [Neospora caninum Liverpool]
gi|325116345|emb|CBZ51898.1| hypothetical protein NCLIV_016900 [Neospora caninum Liverpool]
Length = 894
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPP---------RGCAFVCMNR 203
+E ST L++G+LS + EE L FG+YG++ S+ ++ P R C FV
Sbjct: 175 LEKESSTNLYLGNLSPEITEEFLCQQFGKYGNITSVKIMYPRTEEEKKRNRNCGFVSFES 234
Query: 204 RQDAAKALYKLKNTKLQGKTITLAWAPGKG 233
R A A + L G I + W G
Sbjct: 235 RPQAEAAKHNLDGVAFYGMVIRIGWGKSVG 264
>gi|157128475|ref|XP_001661445.1| RNA-binding protein precursor, putative [Aedes aegypti]
gi|108872557|gb|EAT36782.1| AAEL011150-PA [Aedes aegypti]
Length = 285
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 6/92 (6%)
Query: 141 HRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PR 194
++ L AR +++ T L+I +L + + +E+L FG+YG +V N++ PR
Sbjct: 156 NKRLKVSYARPQSDDIKETNLYITNLPRTITDEQLDIIFGKYGTIVQKNILRDKLTGFPR 215
Query: 195 GCAFVCMNRRQDAAKALYKLKNTKLQGKTITL 226
G AFV N+R++A +A+ L N QG T L
Sbjct: 216 GVAFVRFNKREEAQEAISALNNVIPQGGTQPL 247
>gi|387220007|gb|AFJ69712.1| b chain of rna processing factor scaf8, partial [Nannochloropsis
gaditana CCMP526]
Length = 203
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIK-CKPEYKVPALYVIDSL 69
L L + PI+K KI+ + A+R ++ YK VV +E++ Y+ + VIDSL
Sbjct: 15 LDDLCASSLPITKEKISKVAECALRYVQKYKKVVHMIERYAKHYAGVRYRSAVICVIDSL 74
Query: 70 VRQSRHQFQDKDVFGPRFARNLKATFQHLYQCPPEDKSKII-RVLNLWQKNEVFTPDIIH 128
++ ++KDVF PRF L T Q + + ++ R+ W+K F +
Sbjct: 75 CTKAHRAHKEKDVFIPRFRLRLLETLQGVTTLEGRSERALMDRIFVEWRKRGWFD---VP 131
Query: 129 PLFDMA 134
PL +A
Sbjct: 132 PLATLA 137
>gi|356499475|ref|XP_003518565.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Glycine max]
Length = 484
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
Query: 146 EIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQ 205
E+ E+ TL++G L V E++L D F +G++ SI ++ R CAFV R+
Sbjct: 215 EMNTLEAPEDESIKTLYVGGLDARVTEQDLRDHFYAHGEIESIKMVLQRACAFVTYTTRE 274
Query: 206 DAAKALYKLKNT-KLQGKTITLAWA-PGKGMKDKDWKDFWEVQDGVSY 251
A KA +L N ++G + L W P + D D + Q V++
Sbjct: 275 GAEKAAEELSNKLVIKGLRLKLMWGRPQTSKPESDGSDQAKQQASVAH 322
>gi|323450795|gb|EGB06674.1| hypothetical protein AURANDRAFT_28594, partial [Aureococcus
anophagefferens]
Length = 319
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%)
Query: 145 AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRR 204
+ + A E +T +++G L + V + L FG GD+ I + P RGC FV R
Sbjct: 235 SRLHAPKATEEGENTCVFVGGLDESVSPDMLRHHFGLLGDIAYIRIPPGRGCGFVGFVHR 294
Query: 205 QDAAKALYKLKNTKLQGKTITLAWA 229
++A A+ L+ ++ G + L+W
Sbjct: 295 KNAEAAISTLQGLRINGYKVRLSWG 319
>gi|330933076|ref|XP_003304035.1| hypothetical protein PTT_16453 [Pyrenophora teres f. teres 0-1]
gi|311319615|gb|EFQ87865.1| hypothetical protein PTT_16453 [Pyrenophora teres f. teres 0-1]
Length = 681
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 1 MDVIKTFNQELSSLYDTKPP-ISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYK 59
M + +L SL KPP ++ KI AIT+ + I+ + +VQ + + + +K
Sbjct: 1 MAAMDDLGTQLQSLQTLKPPGVTPTKIKAITQLCVDNIQSHSVIVQKIAQQLQNSVATHK 60
Query: 60 VPALYVIDSLVRQ------------SRHQFQDKDVFGPRFARN-LKATFQHLYQ-CPPED 105
+ LYV+D++ RQ S++ G + R+ L A +L Q P
Sbjct: 61 LGVLYVVDAVARQWVEKAKQAGQTVSKNAAPGTYASGVQMMRDVLPAMMDNLIQSAPAAQ 120
Query: 106 KSKIIRVLNLWQKNEVFTPDII 127
K KI ++L++W++ + F+ D++
Sbjct: 121 KEKISKLLDIWERGQTFSLDML 142
>gi|171695760|ref|XP_001912804.1| hypothetical protein [Podospora anserina S mat+]
gi|170948122|emb|CAP60286.1| unnamed protein product [Podospora anserina S mat+]
Length = 390
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 4/101 (3%)
Query: 129 PLFDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSI 188
P + A P P + +Q N + +TT+++G LS V E+EL F +G++ +
Sbjct: 234 PPYGYAQPAAPFN----PMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYV 289
Query: 189 NLIPPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+ P +GC FV R A A+ +++ + + L+W
Sbjct: 290 KIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 330
>gi|88601667|ref|YP_501845.1| RNA recognition motif-containing protein [Methanospirillum hungatei
JF-1]
gi|88187129|gb|ABD40126.1| RNA-binding region RNP-1 (RNA recognition motif) [Methanospirillum
hungatei JF-1]
Length = 103
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 41/74 (55%)
Query: 156 MCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLK 215
M L++G+L E +LS+ F YG+VVS +I +G FV M ++A AL L
Sbjct: 1 MEGKKLYVGNLPYSTNESQLSELFSSYGEVVSAKIIENKGFGFVEMGTSEEAQAALDALN 60
Query: 216 NTKLQGKTITLAWA 229
+T+ G+T+ + A
Sbjct: 61 DTEFDGRTMRIDEA 74
>gi|451846126|gb|EMD59437.1| hypothetical protein COCSADRAFT_258656 [Cochliobolus sativus
ND90Pr]
Length = 674
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/142 (26%), Positives = 69/142 (48%), Gaps = 15/142 (10%)
Query: 1 MDVIKTFNQELSSLYDTKPP-ISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYK 59
M + +L SL KPP ++ KI AIT+ + I+ + +VQ + + + +K
Sbjct: 1 MAAMDELGTQLQSLQALKPPGVTPTKIKAITQLCVDNIQSHPVIVQKIAQQLQNSAVTHK 60
Query: 60 VPALYVIDSLVRQ------------SRHQFQDKDVFGPRFARN-LKATFQHLYQCPPE-D 105
+ LYV+D++ RQ S++ G + R+ L A +L Q PE
Sbjct: 61 LGVLYVVDAVARQWVERAKQAGQTVSKNAVPGTYASGVQMMRDVLPAMMMNLIQSAPETQ 120
Query: 106 KSKIIRVLNLWQKNEVFTPDII 127
K KI +++++W++ + F D++
Sbjct: 121 KEKISKLIDIWERGQTFPHDML 142
>gi|345569767|gb|EGX52595.1| hypothetical protein AOL_s00007g537 [Arthrobotrys oligospora ATCC
24927]
Length = 685
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 67/141 (47%), Gaps = 15/141 (10%)
Query: 3 VIKTFNQELSSLYDTKPP-ISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVP 61
++ F L+ + KPP +S +KI ++T +I ++ ++Q + K +K+
Sbjct: 6 AVEEFGNLLAQMSGLKPPGVSGSKIKSLTEISIENVQSESILIQKLYTHFKKTPGTHKLG 65
Query: 62 ALYVIDSLVR----QSRHQFQDKDVFGP---------RFARNLKATFQHLYQCPPED-KS 107
LY +DS+VR ++R QD GP R L + + PED K
Sbjct: 66 VLYAVDSIVRAYIDEARKAGQDPTQEGPDGTFSAGVHRITGLLSSLMNDIMIHAPEDTKE 125
Query: 108 KIIRVLNLWQKNEVFTPDIIH 128
KI +++++WQ+ F D+I+
Sbjct: 126 KIKKLMDIWQRGSTFPADLIN 146
Score = 42.7 bits (99), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 59/119 (49%), Gaps = 11/119 (9%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
S TL++G +S E+EL F ++G+V S + + AF+ M R DA +A L+
Sbjct: 474 SRTLFVGGVSS--SEQELRQLFQQHGEVQSCIVNFEKRHAFIKMKTRGDAVRAKEALETH 531
Query: 218 KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYL---EDGGVFD 273
+L + W G G +D D+ G+S I DRL+ + D +L E GG+ D
Sbjct: 532 RLPHSVLRTRW--GVGFGPRDCCDYAT---GISEIALDRLT-DADRRWLQTAEFGGIGD 584
>gi|402077003|gb|EJT72352.1| tRNA selenocysteine-associated protein 1 [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 423
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%)
Query: 145 AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRR 204
A +Q N + +TT+++G LS V E+EL F +GD+ + + P +GC FV R
Sbjct: 265 AAMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGDITYVKIPPGKGCGFVQFVHR 324
Query: 205 QDAAKALYKLKNTKLQGKTITLAWA 229
A A+ +++ + + L+W
Sbjct: 325 HAAEMAINQMQGYPIGNSRVRLSWG 349
>gi|414878627|tpg|DAA55758.1| TPA: hypothetical protein ZEAMMB73_565122 [Zea mays]
Length = 405
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 52/113 (46%), Gaps = 15/113 (13%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMNRRQDAAKAL 211
S L I HLS+ V E L + FG +G+VV++ L PRG ++ +R DA KAL
Sbjct: 105 SAVLCIDHLSRNVNEAHLKEIFGNFGEVVNVELSMDRMVNLPRGYGYIEFKKRADAEKAL 164
Query: 212 YKLKNTKLQGKTITL---------AWAPGKGMKDKDWKDFWEVQDGVSYIPYD 255
+ ++ G + L A +P K +D +++ GVS D
Sbjct: 165 LHMDGGQIDGNIVKLRFTLQPRQRAASPVKAPPPPPKRDALQIEKGVSSAEKD 217
>gi|358333735|dbj|GAA52209.1| U2-associated protein SR140 [Clonorchis sinensis]
Length = 1340
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPP---------RGCAFVCMNRRQDA 207
+T L++G+L+ + E++L + FG YG + S+ ++ P R C FV R+D
Sbjct: 287 TTTNLFLGNLNPKMTEQQLCEAFGRYGPLASVKIMWPRTDEERSRGRNCGFVAFMNRKDG 346
Query: 208 AKALYKLKNTKLQGKTITLAWA 229
+AL ++ +L G + L W
Sbjct: 347 ERALDNIRGKELMGFEMKLGWG 368
>gi|66536941|ref|XP_395009.2| PREDICTED: pre-mRNA-splicing factor RBM22-like [Apis mellifera]
Length = 411
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 140 IHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFV 199
+ R A + + E+ TTL++G+L ++ E++L D F +YG++ S+ ++P + CAF+
Sbjct: 213 LMRRAAAMPKLDPPEDKSITTLYVGNLGDVLTEKQLRDHFYQYGEIRSVTMVPRQQCAFI 272
Query: 200 CMNRRQDAAKALYKLKNTK-LQGKTITLAWAPGKG 233
+R A A + N L G+ +T+ W +G
Sbjct: 273 QYTQRSAAEAAAERTFNKLILGGRRLTIKWGRSQG 307
>gi|442615387|ref|NP_001259303.1| Sex lethal, isoform X [Drosophila melanogaster]
gi|440216503|gb|AGB95148.1| Sex lethal, isoform X [Drosophila melanogaster]
Length = 722
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 50/85 (58%), Gaps = 6/85 (7%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMN 202
AR G E++ T L++ +L + + +++L FG+YG +V N++ PRG AFV N
Sbjct: 193 ARPGGESIKDTNLYVTNLPRTITDDQLDTIFGKYGSIVQKNILRDKLTGRPRGVAFVRYN 252
Query: 203 RRQDAAKALYKLKNTKLQGKTITLA 227
+R++A +A+ L N +G + L+
Sbjct: 253 KREEAQEAISALNNVIPEGGSQPLS 277
>gi|380020369|ref|XP_003694059.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Apis florea]
Length = 411
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 140 IHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFV 199
+ R A + + E+ TTL++G+L ++ E++L D F +YG++ S+ ++P + CAF+
Sbjct: 213 LMRRAAAMPKLDPPEDKSITTLYVGNLGDVLTEKQLRDHFYQYGEIRSVTMVPRQQCAFI 272
Query: 200 CMNRRQDAAKALYKLKNTK-LQGKTITLAWAPGKG 233
+R A A + N L G+ +T+ W +G
Sbjct: 273 QYTQRSAAEAAAERTFNKLILGGRRLTIKWGRSQG 307
>gi|256084514|ref|XP_002578473.1| hypothetical protein [Schistosoma mansoni]
gi|353229225|emb|CCD75396.1| hypothetical protein Smp_161730 [Schistosoma mansoni]
Length = 1232
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPP---------RGCAFVCMNRRQDA 207
+T L++G+L+ + E++L + FG YG + S+ ++ P R C FV R+D
Sbjct: 222 TTTNLFLGNLNPKMTEQQLCEAFGRYGPLASVKIMWPRTEEERSRGRNCGFVAFMNRKDG 281
Query: 208 AKALYKLKNTKLQGKTITLAWA 229
+AL ++ +L G + L W
Sbjct: 282 ERALDNIRGKELMGFEMKLGWG 303
>gi|443732947|gb|ELU17510.1| hypothetical protein CAPTEDRAFT_141629, partial [Capitella teleta]
Length = 781
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 46/88 (52%), Gaps = 9/88 (10%)
Query: 151 NGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG---------CAFVCM 201
N +++ +T L++G+++ + E++L + FG +G + S+ ++ PR C FV
Sbjct: 181 NYADDVMTTNLYLGNINPAMSEQQLCECFGRFGPLASVKIMWPRSEEERSRNRNCGFVAF 240
Query: 202 NRRQDAAKALYKLKNTKLQGKTITLAWA 229
R+D +AL L+ +Q + L W
Sbjct: 241 MNRKDGERALAALQGKDVQAYEMKLGWG 268
>gi|224104133|ref|XP_002313332.1| predicted protein [Populus trichocarpa]
gi|222849740|gb|EEE87287.1| predicted protein [Populus trichocarpa]
Length = 415
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 138 HPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCA 197
+P A +Q + ++ +TT+++G+L EE+L TF + G++ S+ + RGC
Sbjct: 209 YPAPAYTAPVQVVSADGDVTNTTIFVGNLDPNATEEDLRQTFLQLGEIASVKIPAGRGCG 268
Query: 198 FVCMNRRQDAAKALYKLKNTKLQGKTITLAWAPGKGMKDKDWKDFW--EVQDGVSYIPYD 255
FV R A +A+ +++ + + + ++W K +D W +V +Y Y
Sbjct: 269 FVQFATRTSAEEAIQRMQGHVIGQQPVRISWG-----KKQDLTATWGQQVDQWNAYYGYG 323
Query: 256 RLSKEIDYDYLEDGGVFD 273
+ YD GG D
Sbjct: 324 Q-----GYDAYAYGGTHD 336
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 8/78 (10%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMNRRQDAAKALYK 213
TLWIG L E L+ F G+VVSI +I P G FV A + L
Sbjct: 21 TLWIGDLQYWADESYLTSCFAHTGEVVSIKIIRNKLTGQPEGYGFVEFVSHAAAERILQT 80
Query: 214 LKNTKLQG--KTITLAWA 229
T++ G +T L WA
Sbjct: 81 YNGTQMPGTEQTFRLNWA 98
>gi|414878628|tpg|DAA55759.1| TPA: hypothetical protein ZEAMMB73_565122 [Zea mays]
gi|448878260|gb|AGE46093.1| arginine/serine-rich splicing factor SR45_1 [Zea mays]
Length = 429
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 52/110 (47%), Gaps = 19/110 (17%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVS--------INLIPPRGCAFVCMNRRQDAAK 209
S L I HLS+ V E L + FG +G+VV+ +NL PRG ++ +R DA K
Sbjct: 105 SAVLCIDHLSRNVNEAHLKEIFGNFGEVVNVELSMDRMVNL--PRGYGYIEFKKRADAEK 162
Query: 210 ALYKLKNTKLQGKTITL---------AWAPGKGMKDKDWKDFWEVQDGVS 250
AL + ++ G + L A +P K +D +++ GVS
Sbjct: 163 ALLHMDGGQIDGNIVKLRFTLQPRQRAASPVKAPPPPPKRDALQIEKGVS 212
>gi|194741630|ref|XP_001953292.1| GF17279 [Drosophila ananassae]
gi|190626351|gb|EDV41875.1| GF17279 [Drosophila ananassae]
Length = 418
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT- 217
TTL++G+L + + E EL D F ++G++ SI L+P + CAFV +R A A + N
Sbjct: 232 TTLYVGNLPEEITEPELRDQFYQFGEIRSIALVPRQQCAFVQYTKRGAAELAAERTFNKL 291
Query: 218 KLQGKTITLAWA 229
+ G+ +++ WA
Sbjct: 292 VIHGRKVSIKWA 303
>gi|297828039|ref|XP_002881902.1| hypothetical protein ARALYDRAFT_483451 [Arabidopsis lyrata subsp.
lyrata]
gi|297327741|gb|EFH58161.1| hypothetical protein ARALYDRAFT_483451 [Arabidopsis lyrata subsp.
lyrata]
Length = 902
Score = 52.8 bits (125), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
S LW+G L+ E +L++ FG YGD+ I + RG AF+ R ++A A L+
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRRVEEAVAAKEALQGA 76
Query: 218 KLQGKTITLAWA-PGKGMK 235
L G I + +A P K K
Sbjct: 77 NLNGSQIKIEYARPAKPCK 95
>gi|414589689|tpg|DAA40260.1| TPA: hypothetical protein ZEAMMB73_589753 [Zea mays]
Length = 424
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAA 208
AR ++ +TT+++G L V EE+L F +YG++ S+ + + C FV +R++A
Sbjct: 278 ARPDGGDLTNTTVFVGGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQCGFVQFAQRKNAE 337
Query: 209 KALYKLKNTKLQGKTITLAWA 229
AL L + + + + L+W
Sbjct: 338 DALQGLNGSTIGKQAVRLSWG 358
>gi|340722791|ref|XP_003399785.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Bombus terrestris]
gi|350424167|ref|XP_003493709.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Bombus impatiens]
Length = 411
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 140 IHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFV 199
+ R A + + E+ TTL++G+L ++ E++L D F +YG++ S+ ++P + CAF+
Sbjct: 213 LMRRAAAMPKLDPPEDKSITTLYVGNLGDVLTEKQLRDHFYQYGEIRSVTMVPRQQCAFI 272
Query: 200 CMNRRQDAAKALYKLKNTK-LQGKTITLAWAPGKG 233
+R A A + N L G+ +T+ W +G
Sbjct: 273 QYTQRSAAEAAAERTFNKLILGGRRLTIKWGRSQG 307
>gi|291243067|ref|XP_002741428.1| PREDICTED: RNA binding motif protein 22-like [Saccoglossus
kowalevskii]
Length = 429
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Query: 130 LFDMADP-NHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSI 188
+ + DP H + A + E+ TTL++G L + E++L D F ++G++ SI
Sbjct: 202 FYGVNDPVAHKLLNRAATMPKLEAPEDRTITTLYVGGLGDKISEKDLRDHFYQFGEIRSI 261
Query: 189 NLIPPRGCAFVCMNRRQDAAKALYKLKNTK-LQGKTITLAWAPGK------GMKDKDWKD 241
N++ + CAFV RQ + A + N + G+ + + W + G KD ++KD
Sbjct: 262 NVVARQQCAFVQFTTRQSSELAAERSFNKLIMNGRRLNIKWGRSQAQQALMGKKDGEFKD 321
Query: 242 FWEVQ 246
+++
Sbjct: 322 IVQLE 326
>gi|354496142|ref|XP_003510186.1| PREDICTED: RNA-binding protein 4B [Cricetulus griseus]
gi|344250269|gb|EGW06373.1| RNA-binding protein 4B [Cricetulus griseus]
Length = 357
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L N
Sbjct: 76 ASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDN 133
Query: 217 TKLQGK-------TITLAWAPGKG 233
T+ QGK T L APG G
Sbjct: 134 TEFQGKRMHVQLSTSRLRTAPGMG 157
>gi|426192598|gb|EKV42534.1| hypothetical protein AGABI2DRAFT_229063, partial [Agaricus bisporus
var. bisporus H97]
Length = 396
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS L+ EE L F +GD+ + + + C FV R+ DA +A+ K++
Sbjct: 259 NTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKMQGF 318
Query: 218 KLQGKTITLAWA 229
+ G I L+W
Sbjct: 319 PIGGSRIRLSWG 330
>gi|344295811|ref|XP_003419604.1| PREDICTED: RNA-binding protein 4B-like [Loxodonta africana]
Length = 359
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L N
Sbjct: 76 ASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDN 133
Query: 217 TKLQGK-------TITLAWAPGKG 233
T+ QGK T L APG G
Sbjct: 134 TEFQGKRMHVQLSTSRLRTAPGMG 157
>gi|422294816|gb|EKU22116.1| b chain of rna processing factor scaf8, partial [Nannochloropsis
gaditana CCMP526]
gi|422295052|gb|EKU22351.1| b chain of rna processing factor scaf8, partial [Nannochloropsis
gaditana CCMP526]
Length = 224
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 61/126 (48%), Gaps = 5/126 (3%)
Query: 11 LSSLYDTKPPISKAKITAITRSAIRAIKFYKHVVQSVEKFIIK-CKPEYKVPALYVIDSL 69
L L + PI+K KI+ + A+R ++ YK VV +E++ Y+ + VIDSL
Sbjct: 36 LDDLCASSLPITKEKISKVAECALRYVQKYKKVVHMIERYAKHYAGVRYRSAVICVIDSL 95
Query: 70 VRQSRHQFQDKDVFGPRFARNLKATFQHLYQCPPEDKSKII-RVLNLWQKNEVFTPDIIH 128
++ ++KDVF PRF L T Q + + ++ R+ W+K F +
Sbjct: 96 CTKAHRAHKEKDVFIPRFRLRLLETLQGVTTLEGRSERALMDRIFVEWRKRGWFD---VP 152
Query: 129 PLFDMA 134
PL +A
Sbjct: 153 PLATLA 158
>gi|255554923|ref|XP_002518499.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223542344|gb|EEF43886.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 430
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G+L V ++ L + FG YG ++ + + + C FV R A +AL L T
Sbjct: 289 NTTIFVGNLDSNVTDDNLRELFGRYGQLLHVKIPAGKRCGFVQFADRSCAEEALRLLNGT 348
Query: 218 KLQGKTITLAWA 229
L G++I L+W
Sbjct: 349 SLSGQSIRLSWG 360
>gi|374256067|gb|AEZ00895.1| putative zinc finger CCCH-type family protein, partial [Elaeis
guineensis]
Length = 307
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 137 NHPIHREL----AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP 192
N P+ +L E+ + E+ TL++G L + E++L D F +G++ SI ++
Sbjct: 202 NDPVALKLLSKAGEMPSLTAPEDESIKTLYVGGLDARITEQDLRDHFYAHGEIESIRMVL 261
Query: 193 PRGCAFVCMNRRQDAAKALYKLKNT-KLQGKTITLAWAPGKGMKDK 237
R CAFV R+ A KA +L N ++G + L W +G++ +
Sbjct: 262 QRACAFVTYTTREGAEKAAEELANKLVIKGLRLKLMWGKPQGIQTR 307
>gi|255719794|ref|XP_002556177.1| KLTH0H06842p [Lachancea thermotolerans]
gi|238942143|emb|CAR30315.1| KLTH0H06842p [Lachancea thermotolerans CBS 6340]
Length = 547
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAA 208
R+ N +TT++IG L+ E +L F +G ++++ + P +GC FV R DA
Sbjct: 396 GRSPFTNPNNTTVFIGGLTSHTSERQLHSLFAPFGTIINVKIPPGKGCGFVKYAYRIDAE 455
Query: 209 KALYKLKNTKLQGKTITLAWA 229
A+ ++ + G I L+W
Sbjct: 456 AAIQGMQGFIVGGNPIRLSWG 476
>gi|195399758|ref|XP_002058486.1| GJ14294 [Drosophila virilis]
gi|194142046|gb|EDW58454.1| GJ14294 [Drosophila virilis]
Length = 428
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT- 217
TTL++G+L + + E E+ D F +YG++ SI L+P + C+FV +R A A + N
Sbjct: 232 TTLYVGNLPEDITEPEIRDQFYQYGEIRSIALVPRQQCSFVQYTKRSAAELAAERTFNKL 291
Query: 218 KLQGKTITLAWA 229
+ G+ +++ WA
Sbjct: 292 VMHGRKVSIKWA 303
>gi|403301169|ref|XP_003941271.1| PREDICTED: RNA-binding protein 4B [Saimiri boliviensis boliviensis]
Length = 359
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L N
Sbjct: 76 ASTKLHVGNISPTCTNQELRTKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDN 133
Query: 217 TKLQGK-------TITLAWAPGKG 233
T+ QGK T L APG G
Sbjct: 134 TEFQGKRMHVQLSTSRLRTAPGMG 157
>gi|219888851|gb|ACL54800.1| unknown [Zea mays]
gi|414589690|tpg|DAA40261.1| TPA: hypothetical protein ZEAMMB73_589753 [Zea mays]
Length = 322
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAA 208
AR ++ +TT+++G L V EE+L F +YG++ S+ + + C FV +R++A
Sbjct: 176 ARPDGGDLTNTTVFVGGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQCGFVQFAQRKNAE 235
Query: 209 KALYKLKNTKLQGKTITLAWA 229
AL L + + + + L+W
Sbjct: 236 DALQGLNGSTIGKQAVRLSWG 256
>gi|195053830|ref|XP_001993829.1| GH21879 [Drosophila grimshawi]
gi|193895699|gb|EDV94565.1| GH21879 [Drosophila grimshawi]
Length = 423
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT- 217
TTL++G+L + + E E+ D F +YG++ SI L+P + C+FV +R A A + N
Sbjct: 232 TTLYVGNLPEEITEPEIRDQFYQYGEIRSIALVPRQQCSFVQYTKRSAAELAAERTFNKL 291
Query: 218 KLQGKTITLAWA 229
+ G+ +++ WA
Sbjct: 292 VIHGRKVSIKWA 303
>gi|326675792|ref|XP_003200435.1| PREDICTED: protein SCAF8-like [Danio rerio]
Length = 44
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/38 (65%), Positives = 31/38 (81%)
Query: 1 MDVIKTFNQELSSLYDTKPPISKAKITAITRSAIRAIK 38
M+ +K FN EL SL + KPPISKAK+T IT+SAI+AIK
Sbjct: 1 MEAVKAFNGELYSLNEYKPPISKAKMTQITKSAIKAIK 38
>gi|374628484|ref|ZP_09700869.1| RNP-1 like RNA-binding protein [Methanoplanus limicola DSM 2279]
gi|373906597|gb|EHQ34701.1| RNP-1 like RNA-binding protein [Methanoplanus limicola DSM 2279]
Length = 83
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/71 (32%), Positives = 43/71 (60%)
Query: 156 MCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLK 215
M S +++G+L+ V EEE+ D F E+GD++S+ + P G AFV + ++A A++
Sbjct: 1 MESHKVYVGNLAHYVTEEEIEDLFAEFGDIMSVKIKPQEGFAFVEYSTIEEAENAIHGTN 60
Query: 216 NTKLQGKTITL 226
+ G+T+ +
Sbjct: 61 GKEFSGRTLKV 71
>gi|255544854|ref|XP_002513488.1| nuclear acid binding protein, putative [Ricinus communis]
gi|223547396|gb|EEF48891.1| nuclear acid binding protein, putative [Ricinus communis]
Length = 412
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 52/99 (52%)
Query: 131 FDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL 190
+ A +P+ A +Q ++ +TT+++G+L V EEEL F ++G++V + +
Sbjct: 204 YATAKAIYPLPAYTAPVQVVPADNDITNTTIFVGNLDPNVTEEELRPIFLQFGEIVYVKI 263
Query: 191 IPPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
RGC FV R A +A+ +++ + + + ++W
Sbjct: 264 PVGRGCGFVQFATRASAEEAIQRMQGHVIGQQPVRISWG 302
Score = 40.8 bits (94), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMNRRQDAAKALYK 213
TLWIG L V E LS F G+V+SI +I P G FV A + L
Sbjct: 23 TLWIGDLQYWVDENYLSSCFAHTGEVLSIKIIRNKITGQPEGYGFVEFVSHVAAERILQT 82
Query: 214 LKNTKLQG--KTITLAWA 229
T++ G +T L WA
Sbjct: 83 YNGTQMPGTEQTFRLNWA 100
>gi|34495359|gb|AAQ73500.1| zinc responsive protein ZD7 [Rattus norvegicus]
Length = 357
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L N
Sbjct: 76 ASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDN 133
Query: 217 TKLQGK-------TITLAWAPGKG 233
T+ QGK T L APG G
Sbjct: 134 TEFQGKRMHVQLSTSRLRTAPGMG 157
>gi|449279129|gb|EMC86791.1| RNA-binding protein 4, partial [Columba livia]
Length = 250
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 10/111 (9%)
Query: 137 NHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGC 196
+H +H ++A ++ ST L +G++S EL F EYG V+ +++ +
Sbjct: 57 HHKLHGVCINVEASKN-KSKASTKLHVGNISPACTNMELRAKFEEYGPVIECDIV--KDY 113
Query: 197 AFVCMNRRQDAAKALYKLKNTKLQGK-------TITLAWAPGKGMKDKDWK 240
AFV M R +DA +A+ L NT+ QGK T L APG G K ++
Sbjct: 114 AFVHMERAEDAVEAIRGLDNTEFQGKRMRVQLSTSRLRTAPGMGDKSGCYR 164
>gi|55926188|ref|NP_001007015.2| RNA-binding protein 4B [Rattus norvegicus]
gi|62510948|sp|Q64LC9.2|RBM4B_RAT RecName: Full=RNA-binding protein 4B; AltName: Full=RNA-binding
motif protein 30; AltName: Full=RNA-binding motif
protein 4B; AltName: Full=RNA-binding protein 30;
AltName: Full=Zinc-responsive protein ZD7
gi|55562771|gb|AAH86416.1| RNA binding motif protein 4B [Rattus norvegicus]
gi|149061999|gb|EDM12422.1| rCG48244, isoform CRA_a [Rattus norvegicus]
gi|149062000|gb|EDM12423.1| rCG48244, isoform CRA_a [Rattus norvegicus]
Length = 357
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L N
Sbjct: 76 ASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDN 133
Query: 217 TKLQGK-------TITLAWAPGKG 233
T+ QGK T L APG G
Sbjct: 134 TEFQGKRMHVQLSTSRLRTAPGMG 157
>gi|178056236|ref|NP_001116660.1| RNA-binding protein 4B [Sus scrofa]
gi|122131878|sp|Q06AT9.1|RBM4B_PIG RecName: Full=RNA-binding protein 4B; AltName: Full=RNA-binding
motif protein 30; AltName: Full=RNA-binding motif
protein 4B; AltName: Full=RNA-binding protein 30
gi|115394774|gb|ABI97181.1| RBM30 [Sus scrofa]
Length = 359
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L N
Sbjct: 76 ASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDN 133
Query: 217 TKLQGK-------TITLAWAPGKG 233
T+ QGK T L APG G
Sbjct: 134 TEFQGKRMHVQLSTSRLRTAPGMG 157
>gi|27754120|ref|NP_079993.2| RNA-binding protein 4B [Mus musculus]
gi|62511125|sp|Q8VE92.1|RBM4B_MOUSE RecName: Full=RNA-binding protein 4B; AltName: Full=RNA-binding
motif protein 30; AltName: Full=RNA-binding motif
protein 4B; AltName: Full=RNA-binding protein 30
gi|18044496|gb|AAH19488.1| RNA binding motif protein 4B [Mus musculus]
gi|148701119|gb|EDL33066.1| mCG8380, isoform CRA_a [Mus musculus]
gi|148701120|gb|EDL33067.1| mCG8380, isoform CRA_a [Mus musculus]
Length = 357
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L N
Sbjct: 76 ASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDN 133
Query: 217 TKLQGK-------TITLAWAPGKG 233
T+ QGK T L APG G
Sbjct: 134 TEFQGKRMHVQLSTSRLRTAPGMG 157
>gi|452845633|gb|EME47566.1| hypothetical protein DOTSEDRAFT_50941 [Dothistroma septosporum
NZE10]
Length = 763
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 65/134 (48%), Gaps = 17/134 (12%)
Query: 11 LSSLYDTKPP-ISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSL 69
LSSL KPP SK KI IT+ + I+ +VQ+ + + K +K+ ALYVIDS+
Sbjct: 13 LSSLNQLKPPGASKNKIATITQICVNNIQAESTIVQTFYRALKKAPATHKLGALYVIDSV 72
Query: 70 VRQ----SRHQFQDKDVFG-----------PRFARNLKATFQHLYQCPPED-KSKIIRVL 113
+RQ ++ Q+ + G R + A F + + PED K K+ ++
Sbjct: 73 IRQWIDAAKKNGQNLHIEGRGEMGSYPAAVKRVTELMPALFDDIMKGIPEDQKPKLANMI 132
Query: 114 NLWQKNEVFTPDII 127
+W++ F +I
Sbjct: 133 TIWERGSTFPAHLI 146
>gi|395851687|ref|XP_003798384.1| PREDICTED: RNA-binding protein 4B [Otolemur garnettii]
Length = 359
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L N
Sbjct: 76 ASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDN 133
Query: 217 TKLQGK-------TITLAWAPGKG 233
T+ QGK T L APG G
Sbjct: 134 TEFQGKRMHVQLSTSRLRTAPGMG 157
>gi|297822673|ref|XP_002879219.1| hypothetical protein ARALYDRAFT_344719 [Arabidopsis lyrata subsp.
lyrata]
gi|297325058|gb|EFH55478.1| hypothetical protein ARALYDRAFT_344719 [Arabidopsis lyrata subsp.
lyrata]
Length = 464
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 145 AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRR 204
E+ E+ TL++G L+ V E+++ D F YG++ SI ++ + CAFV R
Sbjct: 214 GEMGTLESPEDQSIKTLYVGGLNSRVLEQDIRDQFYAYGEIESIRILAEKACAFVTYTTR 273
Query: 205 QDAAKALYKLKNT-KLQGKTITLAWA 229
+ A KA +L N + G+ + L W
Sbjct: 274 EGAEKAAEELSNRLVVNGQRLKLTWG 299
>gi|115466664|ref|NP_001056931.1| Os06g0170500 [Oryza sativa Japonica Group]
gi|75321585|sp|Q5SNN4.1|C3H40_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 40;
Short=OsC3H40
gi|55773636|dbj|BAD72175.1| RRM-containing RNA-binding protein-like [Oryza sativa Japonica
Group]
gi|113594971|dbj|BAF18845.1| Os06g0170500 [Oryza sativa Japonica Group]
gi|125596196|gb|EAZ35976.1| hypothetical protein OsJ_20278 [Oryza sativa Japonica Group]
gi|215767752|dbj|BAG99980.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 482
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 6/123 (4%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT-K 218
TL+IG L+ + E++L D F +G++ SI ++ R CAFV R+ A KA +L N
Sbjct: 229 TLYIGGLNNRITEQDLRDQFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEELANKLV 288
Query: 219 LQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSY---IPYDRLSKEIDYDYLEDGGVFDED 275
++G + L W GK K D Q V++ +P +S++ D + G+ +
Sbjct: 289 IKGIRLKLMW--GKPQAPKPEDDEAGRQGHVAHGGMLPRAVISQQQSGDQPQPPGMEGQQ 346
Query: 276 TVP 278
P
Sbjct: 347 QAP 349
>gi|348565071|ref|XP_003468327.1| PREDICTED: RNA-binding protein 4B-like [Cavia porcellus]
Length = 358
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L N
Sbjct: 76 ASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDN 133
Query: 217 TKLQGK-------TITLAWAPGKG 233
T+ QGK T L APG G
Sbjct: 134 TEFQGKRMHVQLSTSRLRTAPGMG 157
>gi|149725616|ref|XP_001496839.1| PREDICTED: RNA-binding protein 4B-like [Equus caballus]
Length = 359
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L N
Sbjct: 76 ASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDN 133
Query: 217 TKLQGK-------TITLAWAPGKG 233
T+ QGK T L APG G
Sbjct: 134 TEFQGKRMHVQLSTSRLRTAPGMG 157
>gi|356549608|ref|XP_003543184.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Glycine max]
Length = 467
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
Query: 145 AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRR 204
E+ E+ TL++G L V E++L D F +G++ SI ++ R CAFV R
Sbjct: 214 GEMSTLEAPEDESIKTLYVGGLDARVTEQDLRDHFYAHGEIESIKMVLQRACAFVTYTTR 273
Query: 205 QDAAKALYKLKNT-KLQGKTITLAWA-PGKGMKDKDWKDFWEVQDGVSY 251
+ A KA +L N ++G + L W P + D D Q V++
Sbjct: 274 EGAEKAAEELSNKLVIKGLRLKLMWGRPQTTKPESDGSDQARQQASVAH 322
>gi|156357140|ref|XP_001624081.1| predicted protein [Nematostella vectensis]
gi|156210835|gb|EDO31981.1| predicted protein [Nematostella vectensis]
Length = 413
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 46/78 (58%), Gaps = 1/78 (1%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTK 218
TTL++G L V E++L D F ++G++ SI+++P + CAFVC R A A + N
Sbjct: 233 TTLYVGGLEGKVTEQDLRDHFYQFGELRSISMVPRQNCAFVCFTSRAAAEAAADRSFNKL 292
Query: 219 -LQGKTITLAWAPGKGMK 235
L+G+ + + W +G +
Sbjct: 293 ILKGRRLKIMWGKSQGQQ 310
>gi|410974612|ref|XP_003993737.1| PREDICTED: RNA-binding protein 4B [Felis catus]
Length = 359
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L N
Sbjct: 76 ASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDN 133
Query: 217 TKLQGK-------TITLAWAPGKG 233
T+ QGK T L APG G
Sbjct: 134 TEFQGKRMHVQLSTSRLRTAPGMG 157
>gi|340924065|gb|EGS18968.1| hypothetical protein CTHT_0055850 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 393
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 49/94 (52%), Gaps = 1/94 (1%)
Query: 137 NHPIH-RELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG 195
N+P + ++ IQ N + +TT+++G LS V E+EL F +G++ + + P +G
Sbjct: 246 NYPYYGQQYNPIQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKG 305
Query: 196 CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
C FV R A A+ +++ + + L+W
Sbjct: 306 CGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 339
>gi|223938363|ref|ZP_03630257.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
gi|223892932|gb|EEF59399.1| RNP-1 like RNA-binding protein [bacterium Ellin514]
Length = 127
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 6/79 (7%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMNRRQDAAKA 210
ST L++G+L E EL D F ++G V S++LI PRG FV M ++ A A
Sbjct: 1 MSTKLYVGNLPFTATENELQDMFAQHGPVTSVDLIMDKFSGRPRGFGFVTMETQEGAQAA 60
Query: 211 LYKLKNTKLQGKTITLAWA 229
+ L T G+ +T+ A
Sbjct: 61 VQALNGTDFGGRPLTVNEA 79
>gi|432091076|gb|ELK24288.1| RNA-binding protein 4B [Myotis davidii]
Length = 357
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L N
Sbjct: 76 ASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDN 133
Query: 217 TKLQGK-------TITLAWAPGKG 233
T+ QGK T L APG G
Sbjct: 134 TEFQGKRMHVQLSTSRLRTAPGMG 157
>gi|431910216|gb|ELK13289.1| RNA-binding protein 4B [Pteropus alecto]
Length = 359
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L N
Sbjct: 76 ASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDN 133
Query: 217 TKLQGK-------TITLAWAPGKG 233
T+ QGK T L APG G
Sbjct: 134 TEFQGKRMHVQLSTSRLRTAPGMG 157
>gi|359688053|ref|ZP_09258054.1| RNA recognition motif-containing protein [Leptospira licerasiae
serovar Varillal str. MMD0835]
gi|418758172|ref|ZP_13314356.1| hypothetical protein LEP1GSC185_3619 [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|384114879|gb|EIE01140.1| hypothetical protein LEP1GSC185_3619 [Leptospira licerasiae serovar
Varillal str. VAR 010]
Length = 107
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 44/76 (57%)
Query: 154 ENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYK 213
E+M + L++G+L+ V+++E+SD F YG+V +I +G FV M + A A
Sbjct: 21 ESMQNRKLFVGNLNYSVRQQEISDLFSNYGEVAYAKVIEGKGFGFVEMASEEQAENAKNS 80
Query: 214 LKNTKLQGKTITLAWA 229
L T+ +G+T+ + A
Sbjct: 81 LNGTEFKGRTLNIDIA 96
>gi|328701605|ref|XP_001946045.2| PREDICTED: u2 snRNP-associated SURP motif-containing protein-like
[Acyrthosiphon pisum]
Length = 938
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 49/118 (41%), Gaps = 29/118 (24%)
Query: 121 VFTPDIIHPLFDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFG 180
+ PD I FD DPN +T L++G+L+ + E +L + FG
Sbjct: 171 MVEPDEIKGSFDSGDPN--------------------TTNLYLGNLNPKITEAQLMEVFG 210
Query: 181 EYGDVVSINLIPP---------RGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+YG + SI ++ P R C FV R+D +AL L + + + W
Sbjct: 211 KYGPLASIKIMWPRSDEEKARGRNCGFVAYMSRKDGERALKNLNGKDVMSYEMKMGWG 268
>gi|218202287|gb|EEC84714.1| hypothetical protein OsI_31675 [Oryza sativa Indica Group]
Length = 377
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 45/75 (60%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++ +TT+++G L V E++L TF +YG++ S+ + + C FV +R++A AL L
Sbjct: 242 DLTNTTVFVGGLDPNVSEDDLRQTFSQYGEISSVKIPVGKQCGFVQFVQRKNAEDALQGL 301
Query: 215 KNTKLQGKTITLAWA 229
+ + +T+ L+W
Sbjct: 302 NGSTIGKQTVRLSWG 316
>gi|449454730|ref|XP_004145107.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
gi|449472157|ref|XP_004153511.1| PREDICTED: polyadenylate-binding protein RBP45-like [Cucumis
sativus]
Length = 408
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G+L V +E L F +YG++V + + + C FV + R A +AL L T
Sbjct: 264 NTTIFVGNLDSNVTDEHLRQVFSQYGELVHVKIPAGKRCGFVQFSDRSCAEEALRILNGT 323
Query: 218 KLQGKTITLAWA 229
+ G+ I L+W
Sbjct: 324 PIGGQNIRLSWG 335
>gi|13899354|ref|NP_113680.1| RNA-binding protein 4B [Homo sapiens]
gi|109105261|ref|XP_001109453.1| PREDICTED: RNA-binding protein 4B-like [Macaca mulatta]
gi|114638751|ref|XP_508578.2| PREDICTED: RNA-binding protein 4B isoform 2 [Pan troglodytes]
gi|297688065|ref|XP_002821512.1| PREDICTED: RNA-binding protein 4B [Pongo abelii]
gi|397517079|ref|XP_003828747.1| PREDICTED: RNA-binding protein 4B [Pan paniscus]
gi|402892714|ref|XP_003909554.1| PREDICTED: RNA-binding protein 4B [Papio anubis]
gi|426369353|ref|XP_004051657.1| PREDICTED: RNA-binding protein 4B isoform 1 [Gorilla gorilla
gorilla]
gi|62511129|sp|Q9BQ04.1|RBM4B_HUMAN RecName: Full=RNA-binding protein 4B; AltName: Full=RNA-binding
motif protein 30; AltName: Full=RNA-binding motif
protein 4B; AltName: Full=RNA-binding protein 30
gi|13097558|gb|AAH03503.1| RNA binding motif protein 4B [Homo sapiens]
gi|13436323|gb|AAH04951.1| RNA binding motif protein 4B [Homo sapiens]
gi|119594964|gb|EAW74558.1| RNA binding motif protein 4B [Homo sapiens]
gi|193787792|dbj|BAG52995.1| unnamed protein product [Homo sapiens]
gi|208967358|dbj|BAG73693.1| RNA binding motif protein 4B [synthetic construct]
gi|325464201|gb|ADZ15871.1| RNA binding motif protein 4B [synthetic construct]
gi|355566265|gb|EHH22644.1| RNA-binding motif protein 4B [Macaca mulatta]
gi|355751922|gb|EHH56042.1| RNA-binding motif protein 4B [Macaca fascicularis]
Length = 359
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L N
Sbjct: 76 ASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDN 133
Query: 217 TKLQGK-------TITLAWAPGKG 233
T+ QGK T L APG G
Sbjct: 134 TEFQGKRMHVQLSTSRLRTAPGMG 157
>gi|332249630|ref|XP_003273961.1| PREDICTED: RNA-binding protein 4B isoform 1 [Nomascus leucogenys]
Length = 359
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L N
Sbjct: 76 ASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDN 133
Query: 217 TKLQGK-------TITLAWAPGKG 233
T+ QGK T L APG G
Sbjct: 134 TEFQGKRMHVQLSTSRLRTAPGMG 157
>gi|321464387|gb|EFX75395.1| sex-lethal protein variant 2 [Daphnia pulex]
Length = 297
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMN 202
AR E+ T L++ +L + V E+EL++ F +G++V +NL+ PRG AFV +
Sbjct: 103 ARPPGEDRKETNLYVTNLPRDVTEDELTNIFSAHGNIVQMNLLKDKITGMPRGVAFVRFD 162
Query: 203 RRQDAAKALYKLKNTKLQGKT--ITLAWAPGKGMKDKDWKDFWEV 245
+R++A A+ L T G+T I++ A G + + WE
Sbjct: 163 KREEALAAIEHLNGTIPHGRTNPISVKIAEEHGKQKAAYFAGWEA 207
>gi|57099639|ref|XP_533216.1| PREDICTED: RNA-binding protein 4B isoform 1 [Canis lupus
familiaris]
Length = 359
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L N
Sbjct: 76 ASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDN 133
Query: 217 TKLQGK-------TITLAWAPGKG 233
T+ QGK T L APG G
Sbjct: 134 TEFQGKRMHVQLSTSRLRTAPGMG 157
>gi|15450878|gb|AAK96710.1| Unknown protein [Arabidopsis thaliana]
gi|21387095|gb|AAM47951.1| unknown protein [Arabidopsis thaliana]
Length = 481
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT-K 218
TL++G L+ + E+++ D F +G++ SI ++ + CAFV R+ A KA +L N
Sbjct: 229 TLYVGGLNSRILEQDIRDQFYAHGEIESIRILADKACAFVTYTSREGAEKAAQELSNRLV 288
Query: 219 LQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSY 251
+ G+ + L W G+ D+D + Q GV++
Sbjct: 289 INGQRLKLTW--GRPKPDRDGAN---QQGGVAH 316
>gi|114052178|ref|NP_001039393.1| RNA-binding protein 4B [Bos taurus]
gi|86438058|gb|AAI12498.1| RNA binding motif protein 4B [Bos taurus]
gi|296471585|tpg|DAA13700.1| TPA: RNA binding motif protein 4B [Bos taurus]
Length = 359
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L N
Sbjct: 76 ASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDN 133
Query: 217 TKLQGK-------TITLAWAPGKG 233
T+ QGK T L APG G
Sbjct: 134 TEFQGKRMHVQLSTSRLRTAPGMG 157
>gi|357163840|ref|XP_003579863.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 428
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKL 219
T+++G L V E+EL +F +YGDV S+ + + C FV R DA +AL L + +
Sbjct: 299 TVYVGGLDPNVSEDELRKSFAKYGDVASVKIPQGKQCGFVQYVNRTDAEEALQGLNGSVI 358
Query: 220 QGKTITLAWA 229
+ + L+W
Sbjct: 359 GKQAVRLSWG 368
>gi|299748443|ref|XP_001839126.2| RNA-binding protein Csx1 [Coprinopsis cinerea okayama7#130]
gi|298407975|gb|EAU82695.2| RNA-binding protein Csx1 [Coprinopsis cinerea okayama7#130]
Length = 808
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS L+ EE L F +GD+ + + + C FV R+ DA +A+ K++
Sbjct: 495 NTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKMQGF 554
Query: 218 KLQGKTITLAWA 229
+ G I L+W
Sbjct: 555 PIGGSKIRLSWG 566
>gi|336373915|gb|EGO02253.1| hypothetical protein SERLA73DRAFT_86524 [Serpula lacrymans var.
lacrymans S7.3]
Length = 611
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS L+ EE L F +GD+ + + + C FV R+ DA +A+ K++
Sbjct: 258 NTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKMQGF 317
Query: 218 KLQGKTITLAWA 229
+ G I L+W
Sbjct: 318 PIGGSRIRLSWG 329
>gi|357158812|ref|XP_003578248.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 431
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 45/75 (60%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++ +TT+++G L V E++L +F +YG++ S+ + + C FV +R++A AL L
Sbjct: 295 DLTNTTVFVGGLDPNVSEDDLRQSFSQYGEISSVKIPVGKQCGFVQFLQRKNAEDALQGL 354
Query: 215 KNTKLQGKTITLAWA 229
+ + +T+ L+W
Sbjct: 355 NGSTIGKQTVRLSWG 369
>gi|301784857|ref|XP_002927839.1| PREDICTED: RNA-binding protein 4B-like [Ailuropoda melanoleuca]
gi|281346283|gb|EFB21867.1| hypothetical protein PANDA_017683 [Ailuropoda melanoleuca]
Length = 359
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L N
Sbjct: 76 ASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDN 133
Query: 217 TKLQGK-------TITLAWAPGKG 233
T+ QGK T L APG G
Sbjct: 134 TEFQGKRMHVQLSTSRLRTAPGMG 157
>gi|444510189|gb|ELV09524.1| RNA-binding protein 4B [Tupaia chinensis]
Length = 357
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L N
Sbjct: 76 ASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDN 133
Query: 217 TKLQGK-------TITLAWAPGKG 233
T+ QGK T L APG G
Sbjct: 134 TEFQGKRMHVQLSTSRLRTAPGMG 157
>gi|282165770|ref|NP_001163955.1| RNA binding motif protein 4 [Rattus norvegicus]
gi|149061994|gb|EDM12417.1| rCG48334, isoform CRA_b [Rattus norvegicus]
Length = 365
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
+ QGK T L APG G
Sbjct: 135 EFQGKRMHVQLSTSRLRTAPGMG 157
>gi|321462927|gb|EFX73947.1| hypothetical protein DAPPUDRAFT_215373 [Daphnia pulex]
Length = 899
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 53/113 (46%), Gaps = 31/113 (27%)
Query: 131 FDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL 190
FD+ DPN +T +++G+++ + E++L DTFG+YG + S+ +
Sbjct: 167 FDVGDPN--------------------TTNIYLGNINPKMTEQQLMDTFGKYGPLASVKI 206
Query: 191 IPP---------RGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWAPGKGM 234
+ P R C FV R+DA +A+ KL + + L W GK +
Sbjct: 207 MWPRTEEEKARNRNCGFVAFMCRKDAERAMKKLNGKDILSFEMKLGW--GKAL 257
>gi|324509922|gb|ADY44154.1| Pre-mRNA-splicing factor RBM22 [Ascaris suum]
Length = 412
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 46/79 (58%), Gaps = 3/79 (3%)
Query: 154 ENMCSTTLWIGHL--SKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKAL 211
E+ TTL++G L + + E +L D F ++G++ S+N++ RGCAF+ RQ A +A
Sbjct: 229 EDTTITTLYVGDLGPAGTITEADLRDYFYQFGEIRSLNVLVSRGCAFIAFTTRQAAERAA 288
Query: 212 YKLKNTK-LQGKTITLAWA 229
+ N LQG+ + + W
Sbjct: 289 DRSFNKLILQGRRLKIRWG 307
>gi|167516600|ref|XP_001742641.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779265|gb|EDQ92879.1| predicted protein [Monosiga brevicollis MX1]
Length = 868
Score = 52.0 bits (123), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/94 (31%), Positives = 45/94 (47%), Gaps = 23/94 (24%)
Query: 33 AIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRHQFQDKDVFGPRFARNLK 92
++R ++YKHVV +VE+FI K K +KD F RFA+N++
Sbjct: 63 SLRFCQYYKHVVYAVERFIAKNK-----------------------EKDPFVERFAKNIQ 99
Query: 93 ATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDI 126
T HL + +D+ V+ LW+K E F I
Sbjct: 100 VTIDHLARASAKDRKAAAHVVGLWRKKEFFGETI 133
Score = 48.5 bits (114), Expect = 0.004, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 59/123 (47%), Gaps = 5/123 (4%)
Query: 156 MCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLK 215
+ S+TLWIG L E E+ YG + S + + AFV + RQ A A+ L
Sbjct: 551 LVSSTLWIGSLPPDATEHEVERLCEPYGCLDS-KFMGSKQQAFVILESRQAAEAAVKVLD 609
Query: 216 NTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLEDGGVFDED 275
+ + + + +A KG K+ +D W +GVSY+ R+S + + L DG V D
Sbjct: 610 GARFRQARLKVNFA--KGFIQKNSQD-WNQHNGVSYLELSRISPK-NLKQLVDGCVVDRC 665
Query: 276 TVP 278
T P
Sbjct: 666 TAP 668
>gi|126723790|ref|NP_001075548.1| RNA-binding protein 4 [Oryctolagus cuniculus]
gi|62511088|sp|Q9BDY9.1|RBM4_RABIT RecName: Full=RNA-binding protein 4; AltName: Full=Lark homolog;
AltName: Full=RNA-binding motif protein 4
gi|13182931|gb|AAK14991.1|AF233063_1 RNA-binding protein lark [Oryctolagus cuniculus]
Length = 359
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L N
Sbjct: 76 ASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDN 133
Query: 217 TKLQGK-------TITLAWAPGKG 233
T+ QGK T L APG G
Sbjct: 134 TEFQGKRMHVQLSTSRLRTAPGMG 157
>gi|336275731|ref|XP_003352619.1| hypothetical protein SMAC_01453 [Sordaria macrospora k-hell]
gi|380094509|emb|CCC07889.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 517
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 46/94 (48%)
Query: 136 PNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG 195
P P + +Q N + +TT+++G LS V E+EL F +G++ + + P +G
Sbjct: 249 PPQPYYSGFNPMQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKG 308
Query: 196 CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
C FV R A A+ +++ + + L+W
Sbjct: 309 CGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 342
>gi|120577684|gb|AAI30257.1| RNA binding motif protein 4 [Mus musculus]
Length = 361
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
+ QGK T L APG G
Sbjct: 135 EFQGKRMHVQLSTSRLRTAPGMG 157
>gi|363746234|ref|XP_003643577.1| PREDICTED: RNA-binding protein 4B-like, partial [Gallus gallus]
Length = 242
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 56/111 (50%), Gaps = 10/111 (9%)
Query: 137 NHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGC 196
+H +H ++A ++ ST L +G++S EL F EYG V+ +++ +
Sbjct: 57 HHKLHGVCINVEASKN-KSKASTKLHVGNISPTCTNLELRAKFEEYGPVIECDIV--KDY 113
Query: 197 AFVCMNRRQDAAKALYKLKNTKLQGK-------TITLAWAPGKGMKDKDWK 240
AFV M R +DA +A+ L NT+ QGK T L APG G K ++
Sbjct: 114 AFVHMERAEDAVEAIRGLDNTEFQGKRMRVQLSTSRLRTAPGMGDKSGCYR 164
>gi|354496140|ref|XP_003510185.1| PREDICTED: RNA-binding protein 4 [Cricetulus griseus]
gi|344250268|gb|EGW06372.1| RNA-binding protein 4 [Cricetulus griseus]
Length = 360
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
+ QGK T L APG G
Sbjct: 135 EFQGKRMHVQLSTSRLRTAPGMG 157
>gi|148910710|gb|ABR18422.1| unknown [Picea sitchensis]
Length = 418
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V +E L FG++G++V + + + C FV N R A +AL L T
Sbjct: 282 NTTIFVGGLDPSVTDEMLRQLFGQFGELVHVKIPVGKRCGFVQFNNRASAEEALQMLHGT 341
Query: 218 KLQGKTITLAWA 229
L + I L+W
Sbjct: 342 VLGQQAIRLSWG 353
>gi|426252104|ref|XP_004019758.1| PREDICTED: RNA-binding protein 4B isoform 1 [Ovis aries]
Length = 365
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 45/84 (53%), Gaps = 9/84 (10%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L N
Sbjct: 76 ASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDN 133
Query: 217 TKLQGK-------TITLAWAPGKG 233
T+ QGK T L APG G
Sbjct: 134 TEFQGKRMHVQLSTSRLRTAPGMG 157
>gi|363750388|ref|XP_003645411.1| hypothetical protein Ecym_3082 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889045|gb|AET38594.1| Hypothetical protein Ecym_3082 [Eremothecium cymbalariae
DBVPG#7215]
Length = 586
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%)
Query: 152 GVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKAL 211
G + +TT++IG L+ + E +L F +G+++S+ + P +GC FV R DA A+
Sbjct: 391 GYTDPSNTTVFIGGLNNQITESQLQSLFMPFGNILSVKVPPGKGCGFVKFEHRLDAEAAI 450
Query: 212 YKLKNTKLQGKTITLAWA 229
++ + I L+W
Sbjct: 451 QGMQGFIVGNSAIRLSWG 468
>gi|356563290|ref|XP_003549897.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 402
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 145 AEIQARNGVENM---CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCM 201
A Q G +N +TT+++G+L V ++ L FG+YG++V + + + C FV
Sbjct: 248 ASYQNPQGAQNEHDPNNTTIFVGNLDPNVTDDHLRQVFGQYGELVHVKIPAGKRCGFVQF 307
Query: 202 NRRQDAAKALYKLKNTKLQGKTITLAWA 229
R A +AL L T L G+ + L+W
Sbjct: 308 ADRSCAEEALRVLNGTLLGGQNVRLSWG 335
>gi|15221071|ref|NP_172630.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|75336898|sp|Q9SAB3.1|RB45B_ARATH RecName: Full=Polyadenylate-binding protein RBP45B;
Short=Poly(A)-binding protein RBP45B; AltName:
Full=RNA-binding protein 45B; Short=AtRBP45B
gi|4835793|gb|AAD30259.1|AC007296_20 Similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains. ESTs gb|T44278, gb|R65195, gb|N65904,
gb|H37499, gb|R90487, gb|N95952, gb|T44278, gb|Z20166,
gb|N96891, gb|W43137, gb|F15504, gb|F15495 and gb|Z30868
come from this gene [Arabidopsis thaliana]
gi|20260604|gb|AAM13200.1| similar to gb|U90212 DNA binding protein ACBF from Nicotiana
tabacum and contains 3 PF|00076 RNA recognition motif
domains [Arabidopsis thaliana]
gi|30725662|gb|AAP37853.1| At1g11650 [Arabidopsis thaliana]
gi|332190643|gb|AEE28764.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 405
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V ++ L + F +YG++V + + + C FV + + A +AL L
Sbjct: 260 NTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGV 319
Query: 218 KLQGKTITLAWA 229
+L G T+ L+W
Sbjct: 320 QLGGTTVRLSWG 331
>gi|405971196|gb|EKC36046.1| Pre-mRNA-splicing factor RBM22 [Crassostrea gigas]
Length = 434
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTK 218
TTL+IG+L + + E+EL D F ++G++ IN++ + CAFV R A A K N
Sbjct: 232 TTLYIGNLGEKIGEKELRDHFYQFGEIRMINVVAKQQCAFVQFTSRSSAEAAAEKSFNKL 291
Query: 219 L-QGKTITLAWAPGKGMK 235
+ G+ +T+ W +G +
Sbjct: 292 IVGGRRLTIKWGRSQGQQ 309
>gi|302784144|ref|XP_002973844.1| hypothetical protein SELMODRAFT_100454 [Selaginella moellendorffii]
gi|302803590|ref|XP_002983548.1| hypothetical protein SELMODRAFT_118305 [Selaginella moellendorffii]
gi|300148791|gb|EFJ15449.1| hypothetical protein SELMODRAFT_118305 [Selaginella moellendorffii]
gi|300158176|gb|EFJ24799.1| hypothetical protein SELMODRAFT_100454 [Selaginella moellendorffii]
Length = 350
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
+TT+++G L V++E+L F ++GD+ + + + C FV R A +AL KL
Sbjct: 219 SNTTVFVGGLDHSVKDEDLKQVFSQFGDIQYVKIPAGKNCGFVQFYTRASAEEALQKLHG 278
Query: 217 TKLQGKTITLAWA 229
+ + +TI L+W
Sbjct: 279 STIGQQTIRLSWG 291
>gi|170055898|ref|XP_001863788.1| RNA-binding protein [Culex quinquefasciatus]
gi|167875756|gb|EDS39139.1| RNA-binding protein [Culex quinquefasciatus]
Length = 263
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 47/84 (55%), Gaps = 6/84 (7%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMN 202
AR +++ T L+I +L + + +E+L FG+YG +V N++ PRG AFV N
Sbjct: 142 ARPQSDDIKETNLYITNLPRTITDEQLDIIFGKYGTIVQKNILRDKLTGHPRGVAFVRFN 201
Query: 203 RRQDAAKALYKLKNTKLQGKTITL 226
+R++A +A+ L N QG L
Sbjct: 202 KREEAQEAISALNNVIPQGSNQPL 225
>gi|297737425|emb|CBI26626.3| unnamed protein product [Vitis vinifera]
Length = 224
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 129 PLFDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSI 188
P+ + A N + Q G + +TT+++G L V ++ L F +YG++V +
Sbjct: 23 PVGNFAS-NFQLFSSFQNTQGNQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHV 81
Query: 189 NLIPPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+ + C FV R A +AL L T+L ++I L+W
Sbjct: 82 KIPVGKRCGFVQFANRACAEQALAGLNGTQLGAQSIRLSWG 122
>gi|21592583|gb|AAM64532.1| putative DNA binding protein [Arabidopsis thaliana]
Length = 404
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V ++ L + F +YG++V + + + C FV + + A +AL L
Sbjct: 259 NTTVFVGGLDASVTDDHLKNVFSQYGEIVHVKIPAGKRCGFVQFSEKSCAEEALRMLNGV 318
Query: 218 KLQGKTITLAWA 229
+L G T+ L+W
Sbjct: 319 QLGGTTVRLSWG 330
>gi|62511030|sp|Q6IQ97.1|RBM41_DANRE RecName: Full=RNA-binding protein 4.1; AltName: Full=RNA-binding
motif protein 4.1
gi|47940417|gb|AAH71513.1| RNA binding motif protein 4.1 [Danio rerio]
gi|160774000|gb|AAI55176.1| RNA binding motif protein 4.1 [Danio rerio]
Length = 419
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG VV +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISSSCTNQELRAKFEEYGPVVECDIV--KDYAFVHMERVEDAMEAISGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKGMKDKDWK 240
QGK T L APG G + ++
Sbjct: 135 AFQGKLMSVKLSTSRLRTAPGMGERTGCYR 164
>gi|116789456|gb|ABK25253.1| unknown [Picea sitchensis]
Length = 487
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V +E L FG++G++V + + + C FV N R A +AL L T
Sbjct: 281 NTTIFVGGLDPSVTDEMLRQLFGQFGELVHVKIPVGKRCGFVQFNNRASAEEALQMLHGT 340
Query: 218 KLQGKTITLAWA 229
L + I L+W
Sbjct: 341 VLGQQAIRLSWG 352
>gi|449445890|ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 654
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 59/126 (46%), Gaps = 15/126 (11%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSI----NLIPPR--GCAFVCMN 202
A NG N +T+L++G L V + +L D F + G VVS+ +L R G +V +
Sbjct: 19 AANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRDLTTRRSLGYGYVNYS 78
Query: 203 RRQDAAKALYKLKNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEID 262
QDAA+AL L T L GK I + ++ +D + G I L K ID
Sbjct: 79 NPQDAARALDVLNFTPLNGKPIRVMYS---------HRDPSIRKSGAGNIFIKNLDKAID 129
Query: 263 YDYLED 268
+ L D
Sbjct: 130 HKALHD 135
>gi|389643224|ref|XP_003719244.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae 70-15]
gi|351639013|gb|EHA46877.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae 70-15]
gi|440462667|gb|ELQ32668.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae Y34]
gi|440489843|gb|ELQ69456.1| tRNA selenocysteine-associated protein 1 [Magnaporthe oryzae P131]
Length = 415
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 43/83 (51%)
Query: 147 IQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQD 206
+Q N + +TT+++G LS V E+EL F +GD+ + + P +GC FV R
Sbjct: 272 MQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGDITYVKIPPGKGCGFVQFVHRHA 331
Query: 207 AAKALYKLKNTKLQGKTITLAWA 229
A A+ +++ + + L+W
Sbjct: 332 AEMAINQMQGYPIGNSRVRLSWG 354
>gi|18390760|ref|NP_563788.1| pre-mRNA-splicing factor RBM22/SLT11 [Arabidopsis thaliana]
gi|75335266|sp|Q9LNV5.1|C3H4_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 4;
Short=AtC3H4
gi|8778549|gb|AAF79557.1|AC022464_15 F22G5.30 [Arabidopsis thaliana]
gi|332189993|gb|AEE28114.1| pre-mRNA-splicing factor RBM22/SLT11 [Arabidopsis thaliana]
Length = 481
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT-K 218
TL++G L+ + E+++ D F +G++ SI ++ + CAFV R+ A KA +L N
Sbjct: 229 TLYVGGLNSRILEQDIRDQFYAHGEIESIRILADKACAFVTYTSREGAEKAAQELSNRLV 288
Query: 219 LQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSY 251
+ G+ + L W G+ D+D + Q GV++
Sbjct: 289 INGQRLKLTW--GRPKPDQDGAN---QQGGVAH 316
>gi|357462041|ref|XP_003601302.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
gi|355490350|gb|AES71553.1| Zinc finger CCCH domain-containing protein [Medicago truncatula]
Length = 492
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 2/94 (2%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT-K 218
TL++G L V E++L D F +G++ S+ ++ R CAFV R+ A KA +L N
Sbjct: 229 TLYVGGLDARVTEQDLRDNFYAHGEIESVKMVLQRACAFVTYTTREGAEKAAEELSNKLV 288
Query: 219 LQGKTITLAWA-PGKGMKDKDWKDFWEVQDGVSY 251
++G + L W P + D D Q V++
Sbjct: 289 IKGLRLKLMWGRPQSAKPESDGLDQARQQASVAH 322
>gi|367035672|ref|XP_003667118.1| hypothetical protein MYCTH_2312563 [Myceliophthora thermophila ATCC
42464]
gi|347014391|gb|AEO61873.1| hypothetical protein MYCTH_2312563 [Myceliophthora thermophila ATCC
42464]
Length = 761
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 66/141 (46%), Gaps = 15/141 (10%)
Query: 3 VIKTFNQELSSLYDTKPP-ISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVP 61
V+ L ++ KPP +S ++IT IT + +++ ++Q + K +K+
Sbjct: 5 VVAELEAGLQAMLSLKPPGVSGSRITNITALCVANVQYESVLIQKLFTHFKKTPGTHKLG 64
Query: 62 ALYVIDSLVR----QSRHQFQDKDVFGP---------RFARNLKATFQHLYQCPPED-KS 107
LYV+DS+ R Q++ Q Q + P R + + PED K
Sbjct: 65 VLYVVDSVTRKWLDQAKAQGQTPSLSAPDGTFAAGVHRVTELIPILMNDIIATAPEDQKE 124
Query: 108 KIIRVLNLWQKNEVFTPDIIH 128
KI +++++W+K + F P +++
Sbjct: 125 KIKKLVDIWEKGQTFPPSMVN 145
Score = 40.4 bits (93), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 55/109 (50%), Gaps = 8/109 (7%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
S TL++G ++ E EL + F +G V + + + AFV M R+DA +A +++
Sbjct: 496 SRTLFVGGVT--CSEHELREIFNRFGSVQTCIVNKEKRHAFVKMYYRKDAERAKDAMEDM 553
Query: 218 KLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYL 266
+ Q + W G G +D D+ Q G+S IP +L+ E D ++
Sbjct: 554 RGQEYNLRTRW--GVGFGPRDCSDY---QSGISVIPIHKLT-EADRKWM 596
>gi|164660242|ref|XP_001731244.1| hypothetical protein MGL_1427 [Malassezia globosa CBS 7966]
gi|159105144|gb|EDP44030.1| hypothetical protein MGL_1427 [Malassezia globosa CBS 7966]
Length = 564
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 45/81 (55%), Gaps = 5/81 (6%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG--CAFVCMNRRQDAAKALYKLK 215
+TT+++G L L E L F YG + SIN+ PRG C FV +QDAA+A+ +++
Sbjct: 465 NTTVFVGSLFSLATENTLRTLFAPYGPIQSINI--PRGQDCGFVQFASKQDAARAIAEMQ 522
Query: 216 NTKL-QGKTITLAWAPGKGMK 235
++ G + L+W G K
Sbjct: 523 GFQIVGGGALRLSWGRSVGEK 543
>gi|86262144|ref|NP_033058.2| RNA-binding protein 4 [Mus musculus]
gi|62511057|sp|Q8C7Q4.1|RBM4_MOUSE RecName: Full=RNA-binding protein 4; AltName: Full=Lark homolog;
Short=mLark; AltName: Full=RNA-binding motif protein 4;
AltName: Full=RNA-binding motif protein 4a
gi|26340398|dbj|BAC33862.1| unnamed protein product [Mus musculus]
gi|148701113|gb|EDL33060.1| mCG8382, isoform CRA_a [Mus musculus]
gi|219520483|gb|AAI44950.1| RNA binding motif protein 4 [Mus musculus]
Length = 361
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
+ QGK T L APG G
Sbjct: 135 EFQGKRMHVQLSTSRLRTAPGMG 157
>gi|326495674|dbj|BAJ85933.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 152
Score = 52.0 bits (123), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 39/70 (55%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKL 219
T+++G L + V E+EL +F +YGDV S+ + + C FV R DA +AL L +
Sbjct: 23 TVYVGGLDQNVSEDELRKSFAKYGDVASVKIPLGKQCGFVQYVNRTDAEEALQGLNGAVI 82
Query: 220 QGKTITLAWA 229
+ + L+W
Sbjct: 83 GKQAVRLSWG 92
>gi|410222930|gb|JAA08684.1| RNA binding motif protein 4B [Pan troglodytes]
Length = 359
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNKELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
+ QGK T L APG G
Sbjct: 135 EFQGKRMHVQLSTSRLRTAPGMG 157
>gi|357480263|ref|XP_003610417.1| RNA-binding protein [Medicago truncatula]
gi|355511472|gb|AES92614.1| RNA-binding protein [Medicago truncatula]
Length = 411
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G+L V +E L F +YG++V + + + C FV R A +AL L T
Sbjct: 273 NTTIFVGNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADRSSAEEALRVLNGT 332
Query: 218 KLQGKTITLAWA 229
L G+ + L+W
Sbjct: 333 LLGGQNVRLSWG 344
>gi|242008705|ref|XP_002425142.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212508823|gb|EEB12404.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 849
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 70/168 (41%), Gaps = 43/168 (25%)
Query: 71 RQSRHQFQDKDVFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQKNEVFTPDIIHPL 130
R+ RH+++ LKA + + PP S+I +++ Q+ + D +
Sbjct: 129 REERHKYKGA----------LKAELGNDF--PPSSTSEIPSLMS--QRPIILPEDQLLGS 174
Query: 131 FDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL 190
FD DPN +T +++G+L+ + E++L + FG YG + SI +
Sbjct: 175 FDCGDPN--------------------TTNIYLGNLNPKITEQQLMELFGRYGPLASIKI 214
Query: 191 IPPR---------GCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+ PR C FV R+D +A+ L + + L W
Sbjct: 215 MWPRTDEEKARGKNCGFVAFMNRKDGERAMRNLNGKDVMQYEMKLGWG 262
>gi|110738193|dbj|BAF01027.1| hypothetical protein [Arabidopsis thaliana]
Length = 823
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
N S LW+G+L + E EL+D F +G++ S+ P R AFV N +DA A+ L
Sbjct: 19 NPPSRHLWVGNLPHGILERELADRFLRFGELESLAFQPGRSYAFVNFNHDEDAFAAIESL 78
Query: 215 KNTKLQGKTITLAWA 229
+ L G + + +A
Sbjct: 79 QGFPLSGNPLRIEFA 93
>gi|380817026|gb|AFE80387.1| RNA-binding protein 4B [Macaca mulatta]
gi|384949730|gb|AFI38470.1| RNA-binding protein 4B [Macaca mulatta]
gi|410254450|gb|JAA15192.1| RNA binding motif protein 4B [Pan troglodytes]
gi|410295008|gb|JAA26104.1| RNA binding motif protein 4B [Pan troglodytes]
gi|410352743|gb|JAA42975.1| RNA binding motif protein 4B [Pan troglodytes]
Length = 359
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNKELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
+ QGK T L APG G
Sbjct: 135 EFQGKRMHVQLSTSRLRTAPGMG 157
>gi|110739368|dbj|BAF01596.1| hypothetical protein [Arabidopsis thaliana]
Length = 823
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
N S LW+G+L + E EL+D F +G++ S+ P R AFV N +DA A+ L
Sbjct: 19 NPPSRHLWVGNLPHGILERELADRFLRFGELESLAFQPGRSYAFVNFNHDEDAFAAIESL 78
Query: 215 KNTKLQGKTITLAWA 229
+ L G + + +A
Sbjct: 79 QGFPLSGNPLRIEFA 93
>gi|452986549|gb|EME86305.1| hypothetical protein MYCFIDRAFT_161926 [Pseudocercospora fijiensis
CIRAD86]
Length = 489
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 60/129 (46%), Gaps = 17/129 (13%)
Query: 11 LSSLYDTKPP-ISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSL 69
L+SL KPP SK KI IT + I+ +VQS + + K +K+ ALYVIDS+
Sbjct: 13 LASLNQLKPPGASKNKIATITTLCVNNIQAESTIVQSFYRALKKAPATHKLGALYVIDSV 72
Query: 70 VRQ---------SRHQFQDKDVFGP------RFARNLKATFQHLYQCPPED-KSKIIRVL 113
VRQ QF+ + G R + A F + + P D K K+ ++
Sbjct: 73 VRQWIEKAKSLGQELQFEGRGESGTYPAAVKRVTELMPALFDDIMKGLPADQKPKLENMI 132
Query: 114 NLWQKNEVF 122
+W++ F
Sbjct: 133 TIWERGSTF 141
>gi|388507756|gb|AFK41944.1| unknown [Medicago truncatula]
Length = 411
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G+L V +E L F +YG++V + + + C FV R A +AL L T
Sbjct: 273 NTTIFVGNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADRSSAEEALRVLNGT 332
Query: 218 KLQGKTITLAWA 229
L G+ + L+W
Sbjct: 333 LLGGQNVRLSWG 344
>gi|365192966|gb|AEW68341.1| putative nuclear acid binding protein [Medicago sativa]
Length = 409
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G+L V +E L F +YG++V + + + C FV R A +AL L T
Sbjct: 271 NTTIFVGNLDPNVTDEHLKQVFTQYGELVHVKIPSGKRCGFVQFADRSSAEEALRVLNGT 330
Query: 218 KLQGKTITLAWA 229
L G+ + L+W
Sbjct: 331 LLGGQNVRLSWG 342
>gi|42566726|ref|NP_193001.2| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|332657759|gb|AEE83159.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 823
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
N S LW+G+L + E EL+D F +G++ S+ P R AFV N +DA A+ L
Sbjct: 19 NPPSRHLWVGNLPHGILERELADRFLRFGELESLAFQPGRSYAFVNFNHDEDAFAAIESL 78
Query: 215 KNTKLQGKTITLAWA 229
+ L G + + +A
Sbjct: 79 QGFPLSGNPLRIEFA 93
>gi|326495314|dbj|BAJ85753.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 385
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 5/96 (5%)
Query: 147 IQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQD 206
IQ N N +T+++G L E+ L F YG+VV + + + C FV R
Sbjct: 269 IQTDNDPSN---STIFVGGLDPSATEDVLKQVFTPYGEVVHVKIPVGKRCGFVQYASRSS 325
Query: 207 AAKALYKLKNTKLQGKTITLAWAPGKGMKDKDWKDF 242
A +AL L+ T ++G+ + L+W G+ +K +DF
Sbjct: 326 AEEALLMLQGTMIEGQNVRLSW--GRSPSNKQVQDF 359
>gi|221486024|gb|EEE24294.1| RNA recognition motif-containing protein, putative [Toxoplasma
gondii GT1]
Length = 865
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPP---------RGCAFVCMNR 203
+E ST L++G+LS + EE L FG+YG++ S+ ++ P R C FV
Sbjct: 283 LEKESSTNLYLGNLSPEITEEFLCQQFGKYGNITSVKIMYPRTEEEKKRNRNCGFVSFES 342
Query: 204 RQDAAKALYKLKNTKLQGKTITLAWAPGKG 233
R A A + L G I + W G
Sbjct: 343 RPQAEAAKHNLDGVSFYGMVIRIGWGKSVG 372
>gi|440292957|gb|ELP86129.1| nuclear cap-binding protein subunit, putative [Entamoeba invadens
IP1]
Length = 191
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 9/96 (9%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINL-IPPR----GCAFVCMNRRQDAAKALY 212
STTL++G+L V ++EL+ FGEYGD+ I + + R G FV R+DA A
Sbjct: 31 STTLYVGNLGPSVTDKELNYLFGEYGDLTRIIMGVNHRNEYCGFCFVEYKTREDADYAKR 90
Query: 213 KLKNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDG 248
L T++ GK I + W G K+ ++F +DG
Sbjct: 91 ALDKTQVDGKFIRVDWDYGY----KEGREFGRGKDG 122
>gi|363755816|ref|XP_003648124.1| hypothetical protein Ecym_8010 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891324|gb|AET41307.1| Hypothetical protein Ecym_8010 [Eremothecium cymbalariae
DBVPG#7215]
Length = 602
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT++IG LS LV EEEL F +G +V + + +GC FV R A A+ K++
Sbjct: 285 NTTVFIGGLSSLVTEEELRAYFQPFGQIVYVKIPVGKGCGFVQYVDRSSAENAIAKMQGF 344
Query: 218 KLQGKTITLAWA 229
+ I L+W
Sbjct: 345 PIGNSRIRLSWG 356
>gi|432091077|gb|ELK24289.1| RNA-binding protein 4 [Myotis davidii]
Length = 382
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNKELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
+ QGK T L APG G
Sbjct: 135 EFQGKRMHVQLSTSRLRTAPGMG 157
>gi|426252100|ref|XP_004019756.1| PREDICTED: RNA-binding protein 4 isoform 1 [Ovis aries]
Length = 361
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNKELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
+ QGK T L APG G
Sbjct: 135 EFQGKRMHVQLSTSRLRTAPGMG 157
>gi|221132804|ref|XP_002167622.1| PREDICTED: glycine-rich RNA-binding protein blt801-like [Hydra
magnipapillata]
Length = 161
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMNRRQDAAKAL 211
+ L+IG L E +L D FG+YG VV +++I PRG AFV + +DA A+
Sbjct: 4 AGKLYIGQLDYNADERDLEDLFGKYGTVVKVSIIKDRETQRPRGFAFVEFDSEEDAEAAI 63
Query: 212 YKLKNTKLQGKTITLAWA 229
+ G+ IT+A A
Sbjct: 64 DGCNGQDVNGRQITVARA 81
>gi|68076357|ref|XP_680098.1| cyclophilin [Plasmodium berghei strain ANKA]
gi|56500983|emb|CAH98215.1| cyclophilin, putative [Plasmodium berghei]
Length = 134
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 47/83 (56%), Gaps = 6/83 (7%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSI----NLIPP--RGCAFVCMNRRQDAAKAL 211
+ TL++G + + + ++ L D F +GD+ +I NL+ RG AF+ + DA AL
Sbjct: 6 TETLYVGGIHETIDKKCLYDIFSSFGDIRNIEIPMNLVTNKHRGFAFIEYVEKDDAKHAL 65
Query: 212 YKLKNTKLQGKTITLAWAPGKGM 234
Y + N +L GK IT+ ++ K M
Sbjct: 66 YNMSNFELNGKIITVNYSRTKKM 88
>gi|356557398|ref|XP_003547003.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Glycine max]
Length = 404
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 42/72 (58%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+T +++G+L V EEEL F ++G++VS+ + +GC FV R A +A+ K++
Sbjct: 211 NTAIFVGNLDLNVSEEELKQNFLQFGEIVSVKVQSGKGCGFVQFGTRASAEEAIQKMQEK 270
Query: 218 KLQGKTITLAWA 229
+ + + ++W
Sbjct: 271 MIGQQVVRISWG 282
>gi|237834785|ref|XP_002366690.1| RRM domain-containing protein [Toxoplasma gondii ME49]
gi|211964354|gb|EEA99549.1| RRM domain-containing protein [Toxoplasma gondii ME49]
gi|221503520|gb|EEE29211.1| RNA recognition motif-containing protein, putative [Toxoplasma
gondii VEG]
Length = 859
Score = 51.6 bits (122), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 41/90 (45%), Gaps = 9/90 (10%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPP---------RGCAFVCMNR 203
+E ST L++G+LS + EE L FG+YG++ S+ ++ P R C FV
Sbjct: 283 LEKESSTNLYLGNLSPEITEEFLCQQFGKYGNITSVKIMYPRTEEEKKRNRNCGFVSFES 342
Query: 204 RQDAAKALYKLKNTKLQGKTITLAWAPGKG 233
R A A + L G I + W G
Sbjct: 343 RPQAEAAKHNLDGVSFYGMVIRIGWGKSVG 372
>gi|413922759|gb|AFW62691.1| hypothetical protein ZEAMMB73_026342 [Zea mays]
Length = 430
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 39/70 (55%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKL 219
T+++G L V E+EL F +YGD+ S+ + + C FV R DA +AL+ L + +
Sbjct: 299 TVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFGKQCGFVQFVNRVDAEEALHGLNGSTI 358
Query: 220 QGKTITLAWA 229
+ + L+W
Sbjct: 359 GKQAVRLSWG 368
>gi|168036104|ref|XP_001770548.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678256|gb|EDQ64717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 645
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 56/120 (46%), Gaps = 15/120 (12%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSI----NLIPPR--GCAFVCMNRRQDAA 208
N ST+L++G L V E +L + F + G VVSI +LI R G A+V N QDA
Sbjct: 20 NFVSTSLYVGDLESTVSEAQLYEIFSQVGQVVSIRVCRDLITRRSLGYAYVNYNNAQDAT 79
Query: 209 KALYKLKNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLED 268
+AL L + GK I + ++ +D + G + I L K ID L D
Sbjct: 80 RALELLNFNAVNGKPIRIMFS---------HRDPSIRKSGTANIFIKNLDKSIDNKALHD 130
Score = 38.5 bits (88), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 40/82 (48%), Gaps = 5/82 (6%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI-----PPRGCAFVCMNRRQDA 207
+E L++ +L + +E+L + F EYG +VS ++ RG FV + +A
Sbjct: 300 IEKYQGVNLYLKNLDDTIDDEKLREIFSEYGTIVSCKVMRDPQGQSRGSGFVAFSSPDEA 359
Query: 208 AKALYKLKNTKLQGKTITLAWA 229
+A+ ++ + K + +A A
Sbjct: 360 TRAVTEMNGKMVGSKPLYVALA 381
>gi|348670884|gb|EGZ10705.1| hypothetical protein PHYSODRAFT_520170 [Phytophthora sojae]
Length = 390
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%)
Query: 154 ENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYK 213
E +TT+++G L E+EL FG G++VS+ + P RGC FV ++ A A+ +
Sbjct: 190 EEGTNTTVFVGGLDPSTTEDELRARFGALGEIVSVKVPPGRGCGFVQYTSKEAAEVAITQ 249
Query: 214 LKNTKLQG 221
+ T + G
Sbjct: 250 MNGTVISG 257
>gi|212722984|ref|NP_001132004.1| uncharacterized protein LOC100193409 [Zea mays]
gi|194693170|gb|ACF80669.1| unknown [Zea mays]
Length = 422
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAA 208
AR ++ +TT+++G L V EE+L F +YG++ S+ + + C FV +R++A
Sbjct: 278 ARPDGGDLTNTTVFVGGLDPDVSEEDLRQAFSQYGEISSVKIPVGKQCGFVQFAQRKNAE 337
Query: 209 KALYKLKNTKLQGKTITLAWA 229
AL L + + + + L+W
Sbjct: 338 DALQGLNGSTIGKQAVRLSWG 358
>gi|383422057|gb|AFH34242.1| RNA-binding protein 4B [Macaca mulatta]
Length = 359
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNKELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
+ QGK T L APG G
Sbjct: 135 EFQGKRMHVQLSTSRLRTAPGMG 157
>gi|73982920|ref|XP_852303.1| PREDICTED: RNA-binding protein 4 isoform 1 [Canis lupus familiaris]
gi|301784859|ref|XP_002927840.1| PREDICTED: RNA-binding protein 4-like isoform 1 [Ailuropoda
melanoleuca]
gi|301784861|ref|XP_002927841.1| PREDICTED: RNA-binding protein 4-like isoform 2 [Ailuropoda
melanoleuca]
gi|410974610|ref|XP_003993736.1| PREDICTED: RNA-binding protein 4 [Felis catus]
gi|281346284|gb|EFB21868.1| hypothetical protein PANDA_017684 [Ailuropoda melanoleuca]
Length = 365
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNKELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
+ QGK T L APG G
Sbjct: 135 EFQGKRMHVQLSTSRLRTAPGMG 157
>gi|195399021|ref|XP_002058119.1| GJ15667 [Drosophila virilis]
gi|194150543|gb|EDW66227.1| GJ15667 [Drosophila virilis]
Length = 428
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMN 202
AR G +++ T L++ +LS+ + +++L F YG +V N++ PRG AFV N
Sbjct: 93 ARPGGQSIKDTNLYVINLSRNINDDQLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYN 152
Query: 203 RRQDAAKALYKLKNTKLQGKT----ITLAWAPGK 232
+R++A +A+ L NT +G + + LA GK
Sbjct: 153 KREEAQEAIKALNNTVPEGGSQPIWVRLAEEHGK 186
>gi|413951260|gb|AFW83909.1| hypothetical protein ZEAMMB73_067199 [Zea mays]
gi|448878262|gb|AGE46094.1| arginine/serine-rich splicing factor SR45_2 transcript I [Zea mays]
gi|448878264|gb|AGE46095.1| arginine/serine-rich splicing factor SR45_2 transcript II [Zea
mays]
Length = 422
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 15/113 (13%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMNRRQDAAKAL 211
S L I HLS+ V E L + FG +G+VV++ L PRG ++ +R DA KAL
Sbjct: 101 SVVLCIDHLSRNVNEAHLKEIFGNFGEVVNVELSMDRMVNLPRGYGYIEFKKRADAEKAL 160
Query: 212 YKLKNTKLQGKTITL---------AWAPGKGMKDKDWKDFWEVQDGVSYIPYD 255
+ ++ G + L A +P K +D +++ G+S D
Sbjct: 161 LYMDGGQIDGNVVKLRFTLQPRQRAVSPMKAPPPPPKRDVAQIEKGLSSAEKD 213
>gi|384487643|gb|EIE79823.1| hypothetical protein RO3G_04528 [Rhizopus delemar RA 99-880]
Length = 162
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 42/77 (54%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALY 212
++ STT++IG LS ++E+EL F +GD++ + + +GC FV R A A+
Sbjct: 30 TSSINSTTVFIGGLSTPIKEDELRHYFAPFGDIIYVKIPQGKGCGFVQYTTRSSAELAIQ 89
Query: 213 KLKNTKLQGKTITLAWA 229
++ ++ I L+W
Sbjct: 90 QMNGYQIGTSRIRLSWG 106
>gi|395851691|ref|XP_003798386.1| PREDICTED: RNA-binding protein 4 [Otolemur garnettii]
Length = 365
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNKELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
+ QGK T L APG G
Sbjct: 135 EFQGKRMHVQLSTSRLRTAPGMG 157
>gi|296218877|ref|XP_002755613.1| PREDICTED: RNA-binding protein 4 [Callithrix jacchus]
gi|403301167|ref|XP_003941270.1| PREDICTED: RNA-binding protein 4 [Saimiri boliviensis boliviensis]
Length = 364
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNKELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
+ QGK T L APG G
Sbjct: 135 EFQGKRMHVQLSTSRLRTAPGMG 157
>gi|93277122|ref|NP_002887.2| RNA-binding protein 4 isoform 1 [Homo sapiens]
gi|350539417|ref|NP_001233570.1| RNA-binding protein 4 [Pan troglodytes]
gi|332249626|ref|XP_003273959.1| PREDICTED: RNA-binding protein 4 isoform 2 [Nomascus leucogenys]
gi|397517069|ref|XP_003828742.1| PREDICTED: RNA-binding protein 4 isoform 1 [Pan paniscus]
gi|402892712|ref|XP_003909553.1| PREDICTED: RNA-binding protein 4 [Papio anubis]
gi|426369345|ref|XP_004051653.1| PREDICTED: RNA-binding protein 4 isoform 1 [Gorilla gorilla
gorilla]
gi|62511089|sp|Q9BWF3.1|RBM4_HUMAN RecName: Full=RNA-binding protein 4; AltName: Full=Lark homolog;
Short=hLark; AltName: Full=RNA-binding motif protein 4;
AltName: Full=RNA-binding motif protein 4a
gi|75077302|sp|Q4R979.1|RBM4_MACFA RecName: Full=RNA-binding protein 4; AltName: Full=RNA-binding
motif protein 4
gi|12653083|gb|AAH00307.1| RNA binding motif protein 4 [Homo sapiens]
gi|21618467|gb|AAH32735.1| RNA binding motif protein 4 [Homo sapiens]
gi|67967719|dbj|BAE00342.1| unnamed protein product [Macaca fascicularis]
gi|167774193|gb|ABZ92531.1| RNA binding motif protein 4 [synthetic construct]
gi|193783581|dbj|BAG53492.1| unnamed protein product [Homo sapiens]
gi|261859218|dbj|BAI46131.1| RNA binding motif protein 14 [synthetic construct]
gi|343958742|dbj|BAK63226.1| RNA binding motif protein 4 [Pan troglodytes]
gi|355566266|gb|EHH22645.1| RNA-binding motif protein 4 [Macaca mulatta]
gi|380784029|gb|AFE63890.1| RNA-binding protein 4 isoform 1 [Macaca mulatta]
gi|383409025|gb|AFH27726.1| RNA-binding protein 4 isoform 1 [Macaca mulatta]
gi|384942564|gb|AFI34887.1| RNA-binding protein 4 isoform 1 [Macaca mulatta]
gi|410222926|gb|JAA08682.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410222932|gb|JAA08685.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410222940|gb|JAA08689.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410254448|gb|JAA15191.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410254452|gb|JAA15193.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410295006|gb|JAA26103.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410352741|gb|JAA42974.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410352747|gb|JAA42977.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410352751|gb|JAA42979.1| RNA binding motif protein 4 [Pan troglodytes]
gi|410352753|gb|JAA42980.1| RNA binding motif protein 4 [Pan troglodytes]
Length = 364
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNKELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
+ QGK T L APG G
Sbjct: 135 EFQGKRMHVQLSTSRLRTAPGMG 157
>gi|302656875|ref|XP_003020176.1| hypothetical protein TRV_05751 [Trichophyton verrucosum HKI 0517]
gi|291183977|gb|EFE39558.1| hypothetical protein TRV_05751 [Trichophyton verrucosum HKI 0517]
Length = 281
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 145 AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRR 204
A Q N + +TT+++G LS V E+EL F +G++ + + P +GC FV +R
Sbjct: 155 AAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 214
Query: 205 QDAAKALYKLKNTKLQGKTITLAWA 229
A A+ +++ + + L+W
Sbjct: 215 HAAEMAINQMQGYPIGNSRVRLSWG 239
>gi|158259071|dbj|BAF85494.1| unnamed protein product [Homo sapiens]
Length = 364
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPACTNKELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
+ QGK T L APG G
Sbjct: 135 EFQGKRMHVQLSTSRLRTAPGMG 157
>gi|125586871|gb|EAZ27535.1| hypothetical protein OsJ_11490 [Oryza sativa Japonica Group]
Length = 171
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V +E L F YG++V + + + C FV + R A +A+ L +
Sbjct: 32 NTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGS 91
Query: 218 KLQGKTITLAWAPGKGMK 235
+L G++I L+W G K
Sbjct: 92 QLGGQSIRLSWGRSPGNK 109
>gi|431910217|gb|ELK13290.1| RNA-binding protein 4 [Pteropus alecto]
Length = 365
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNKELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
+ QGK T L APG G
Sbjct: 135 EFQGKRMHVQLSTSRLRTAPGMG 157
>gi|222628961|gb|EEE61093.1| hypothetical protein OsJ_14988 [Oryza sativa Japonica Group]
Length = 373
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKL 219
T+++G L V E+EL F +YGDV S+ + + C FV R DA +AL L + +
Sbjct: 246 TVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVI 305
Query: 220 QGKTITLAWA 229
+ + L+W
Sbjct: 306 GKQAVRLSWG 315
>gi|449453956|ref|XP_004144722.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Cucumis sativus]
gi|449525922|ref|XP_004169965.1| PREDICTED: zinc finger CCCH domain-containing protein 40-like
[Cucumis sativus]
Length = 517
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT-K 218
TL++G L V E++L D F +G++ SI ++ R CAFV R+ A KA +L N
Sbjct: 229 TLYVGGLDARVSEQDLRDNFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEELSNKLV 288
Query: 219 LQGKTITLAWA 229
++G + L W
Sbjct: 289 IRGLRLKLMWG 299
>gi|313229243|emb|CBY23829.1| unnamed protein product [Oikopleura dioica]
Length = 441
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 66/161 (40%), Gaps = 26/161 (16%)
Query: 84 GPRFARNL--------KATFQHLYQCP-----PEDKSKIIRVLNLWQKNEVFTPDIIHPL 130
GP + RNL K + +CP P D + V N I+
Sbjct: 162 GPYYKRNLPHICSFWVKGECRRGEECPYRHEKPSDPDDPLSVQN-----------IVDRF 210
Query: 131 FDMADP-NHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSIN 189
+ DP + R E+ + E+ TTLW G ++ + E +L + F ++G+V IN
Sbjct: 211 YGTKDPVADKLLRRAEEMPSMAPPEDKTITTLWCGGVTSELAESDLQEYFYQFGEVACIN 270
Query: 190 LIPPRGCAFVCMNRRQDAAKALYKL-KNTKLQGKTITLAWA 229
++ CAFV +R+ A A K L+G + + W
Sbjct: 271 IVQKSSCAFVQFTKRESAENAANKCYGRLDLKGVRLNVRWG 311
>gi|291385477|ref|XP_002709280.1| PREDICTED: RNA binding motif protein 4B-like [Oryctolagus
cuniculus]
Length = 365
Score = 51.6 bits (122), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNKELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
+ QGK T L APG G
Sbjct: 135 EFQGKRMHVQLSTSRLRTAPGMG 157
>gi|392586871|gb|EIW76206.1| RNA-binding domain-containing protein [Coniophora puteana
RWD-64-598 SS2]
Length = 876
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS L+ EE L F +GD+ + + + C FV R+ DA +A+ K++
Sbjct: 577 NTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPIGKHCGFVQFVRKADAERAIEKMQGF 636
Query: 218 KLQGKTITLAWA 229
+ G I L+W
Sbjct: 637 PIGGSRIRLSWG 648
>gi|149725614|ref|XP_001496788.1| PREDICTED: RNA-binding protein 4 isoform 1 [Equus caballus]
gi|338712238|ref|XP_003362679.1| PREDICTED: RNA-binding protein 4 isoform 2 [Equus caballus]
Length = 361
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNKELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
+ QGK T L APG G
Sbjct: 135 EFQGKRMHVQLSTSRLRTAPGMG 157
>gi|149391493|gb|ABR25764.1| nucleic acid binding protein [Oryza sativa Indica Group]
Length = 151
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKL 219
T+++G L V E+EL F +YGDV S+ + + C FV R DA +AL L + +
Sbjct: 24 TVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVI 83
Query: 220 QGKTITLAWA 229
+ + L+W
Sbjct: 84 GKQAVRLSWG 93
>gi|167518630|ref|XP_001743655.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777617|gb|EDQ91233.1| predicted protein [Monosiga brevicollis MX1]
Length = 595
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 8/80 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG--------CAFVCMNRRQDAAK 209
+T L++ +L +E+ L+ FG +G + S+ ++ PR C FV RR DA +
Sbjct: 144 TTNLYVNNLPTTFKEDLLAQLFGVHGPLASVKIMWPRHPSEVRDNLCGFVAFMRRADAQR 203
Query: 210 ALYKLKNTKLQGKTITLAWA 229
AL KL ++G I WA
Sbjct: 204 ALEKLNGALVEGHDIKTGWA 223
>gi|178056229|ref|NP_001116659.1| RNA-binding protein 4 [Sus scrofa]
gi|115394772|gb|ABI97180.1| RBM4 [Sus scrofa]
Length = 365
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNKELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
+ QGK T L APG G
Sbjct: 135 EFQGKRMHVQLSTSRLRTAPGMG 157
>gi|339522325|gb|AEJ84327.1| RNA-binding protein 4 [Capra hircus]
Length = 362
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 56/117 (47%), Gaps = 18/117 (15%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNKELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGKTI-------TLAWAPGKGMKDKDWK----DFWEVQDGVSYIPYDRLSKEIDY 263
+ QGK + L APG G + ++ W + P DR + D+
Sbjct: 135 EFQGKRMHGQLSPSRLRTAPGMGAQGGCYRCGKEGHWSKE-----CPVDRSGRVADF 186
>gi|238600700|ref|XP_002395212.1| hypothetical protein MPER_04772 [Moniliophthora perniciosa FA553]
gi|215465560|gb|EEB96142.1| hypothetical protein MPER_04772 [Moniliophthora perniciosa FA553]
Length = 200
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS L+ E+ L F +GD+ + + + C FV R+ DA +A+ K++
Sbjct: 116 NTTVFVGGLSPLINEDTLRTFFAPFGDIHYVKVPVGKNCGFVQFVRKADAERAIEKMQGF 175
Query: 218 KLQGKTITLAWA 229
+ G I L+W
Sbjct: 176 PIGGSRIRLSWG 187
>gi|348565067|ref|XP_003468325.1| PREDICTED: RNA-binding protein 4-like [Cavia porcellus]
Length = 365
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNKELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
+ QGK T L APG G
Sbjct: 135 EFQGKRMHVQLSTSRLRTAPGMG 157
>gi|357125138|ref|XP_003564252.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
[Brachypodium distachyon]
Length = 488
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT-K 218
TL+IG L V E++L D F +G++ SI ++ R CAFV R+ A KA +L N
Sbjct: 229 TLYIGGLDNRVTEQDLRDQFYAHGEIESIRMVLQRACAFVTYTTREGAEKAAEELANKLV 288
Query: 219 LQGKTITLAWA 229
++G + L W
Sbjct: 289 IKGVRLKLMWG 299
>gi|297791731|ref|XP_002863750.1| hypothetical protein ARALYDRAFT_331131 [Arabidopsis lyrata subsp.
lyrata]
gi|297309585|gb|EFH40009.1| hypothetical protein ARALYDRAFT_331131 [Arabidopsis lyrata subsp.
lyrata]
Length = 400
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 166 LSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTIT 225
L V +++L F YG++VS+ + +GC F+ R++A +AL KL + + +T+
Sbjct: 274 LDSSVTDDDLRQPFAGYGEIVSVKIPVGKGCGFIQFVNRENAEEALEKLNGSMIGKQTVR 333
Query: 226 LAWA--PGKGMKDKDWKDFW 243
L+W PG ++ D W
Sbjct: 334 LSWGRNPGNKQPRGEYADQW 353
>gi|197098970|ref|NP_001126757.1| RNA-binding protein 4 [Pongo abelii]
gi|55732548|emb|CAH92974.1| hypothetical protein [Pongo abelii]
Length = 170
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNKELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
+ QGK T L APG G
Sbjct: 135 EFQGKRMHVQLSTSRLRTAPGMG 157
>gi|449549395|gb|EMD40360.1| hypothetical protein CERSUDRAFT_110955 [Ceriporiopsis subvermispora
B]
Length = 709
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTK 218
TT+++G LS L+ E+ L F +GD+ + + + C FV R+ DA +A+ K++
Sbjct: 389 TTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPAGKHCGFVQFVRKPDAERAIEKMQGFP 448
Query: 219 LQGKTITLAWA 229
+ G I L+W
Sbjct: 449 IGGSRIRLSWG 459
>gi|149392334|gb|ABR25993.1| nucleic acid binding protein [Oryza sativa Indica Group]
Length = 128
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKL 219
T+++G L V E+EL F +YGDV S+ + + C FV R DA +AL L + +
Sbjct: 1 TVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVI 60
Query: 220 QGKTITLAWA 229
+ + L+W
Sbjct: 61 GKQAVRLSWG 70
>gi|336386826|gb|EGO27972.1| hypothetical protein SERLADRAFT_414166 [Serpula lacrymans var.
lacrymans S7.9]
Length = 933
Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS L+ EE L F +GD+ + + + C FV R+ DA +A+ K++
Sbjct: 580 NTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKMQGF 639
Query: 218 KLQGKTITLAWA 229
+ G I L+W
Sbjct: 640 PIGGSRIRLSWG 651
>gi|340386570|ref|XP_003391781.1| PREDICTED: u2 snRNP-associated SURP motif-containing protein-like,
partial [Amphimedon queenslandica]
Length = 271
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPR---------GCAFVCMNRRQDAA 208
+T L++G+++ + EE L FG++G + S+ ++ PR C FV +R DA
Sbjct: 73 TTNLYVGNINPKMTEEMLCQHFGKFGPLASVKIMWPRTEEEKSRNKNCGFVAYMKRPDAE 132
Query: 209 KALYKLKNTKLQGKTITLAWA 229
KAL K + + G + + W
Sbjct: 133 KALDATKGSSIMGYEVQIGWG 153
>gi|242824548|ref|XP_002488281.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
gi|218713202|gb|EED12627.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
Length = 393
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 127 IHPLFDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVV 186
I+P M P + Q N + +TT+++G LS V E+EL F +G++
Sbjct: 252 IYPPAAMGGPPMGFY---GAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEIT 308
Query: 187 SINLIPPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+ + P +GC FV +R A A+ +++ + + L+W
Sbjct: 309 YVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 351
>gi|125548504|gb|EAY94326.1| hypothetical protein OsI_16094 [Oryza sativa Indica Group]
Length = 426
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKL 219
T+++G L V E+EL F +YGDV S+ + + C FV R DA +AL L + +
Sbjct: 299 TVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVI 358
Query: 220 QGKTITLAWA 229
+ + L+W
Sbjct: 359 GKQAVRLSWG 368
>gi|116310076|emb|CAH67097.1| H0818E04.14 [Oryza sativa Indica Group]
Length = 426
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKL 219
T+++G L V E+EL F +YGDV S+ + + C FV R DA +AL L + +
Sbjct: 299 TVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVI 358
Query: 220 QGKTITLAWA 229
+ + L+W
Sbjct: 359 GKQAVRLSWG 368
>gi|116004239|ref|NP_001070478.1| RNA-binding protein 4 [Bos taurus]
gi|91207336|sp|Q3MHX3.1|RBM4_BOVIN RecName: Full=RNA-binding protein 4; AltName: Full=RNA-binding
motif protein 4; AltName: Full=RNA-binding motif protein
4a
gi|75775098|gb|AAI04571.1| RNA binding motif protein 4 [Bos taurus]
gi|146231708|gb|ABQ12929.1| RNA binding motif protein 4 [Bos taurus]
gi|296471486|tpg|DAA13601.1| TPA: RNA-binding protein 4 [Bos taurus]
gi|440899389|gb|ELR50692.1| RNA-binding protein 4 [Bos grunniens mutus]
Length = 362
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNKELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
+ QGK T L APG G
Sbjct: 135 EFQGKRMHVQLSTSRLRTAPGMG 157
>gi|195998081|ref|XP_002108909.1| hypothetical protein TRIADDRAFT_52384 [Trichoplax adhaerens]
gi|190589685|gb|EDV29707.1| hypothetical protein TRIADDRAFT_52384 [Trichoplax adhaerens]
Length = 759
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 42/83 (50%), Gaps = 8/83 (9%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMNRRQD 206
E+ CS LWIG L V+ +L D EYG V+S +I + V M R ++
Sbjct: 270 TEDNCS--LWIGGLQHKVRAADLKDKLSEYGKVISATIIISMKSLESKYYGHVQMARHKE 327
Query: 207 AAKALYKLKNTKLQGKTITLAWA 229
AA+ + L NT + G +T+ WA
Sbjct: 328 AAECIACLNNTNISGSVVTIEWA 350
>gi|356521983|ref|XP_003529629.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 397
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G+L V ++ L FG YG++V + + + C FV R A +AL L T
Sbjct: 260 NTTIFVGNLDPNVTDDHLRQVFGHYGELVHVKIPAGKRCGFVQFADRSCAEEALRVLNGT 319
Query: 218 KLQGKTITLAWA 229
L G+ + L+W
Sbjct: 320 LLGGQNVRLSWG 331
>gi|348503420|ref|XP_003439262.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein
[Oreochromis niloticus]
Length = 972
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPP---------RGCAFVCMNR 203
V + +T L++G+++ + EE L FG YG + S+ ++ P R C FV
Sbjct: 204 VGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFVAFMN 263
Query: 204 RQDAAKALYKLKNTKLQGKTITLAWAPG 231
R+DA +AL L + + L W G
Sbjct: 264 RRDAERALKNLNGKMIMNFEMKLGWGKG 291
>gi|297602825|ref|NP_001052934.2| Os04g0449900 [Oryza sativa Japonica Group]
gi|255675510|dbj|BAF14848.2| Os04g0449900 [Oryza sativa Japonica Group]
Length = 387
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKL 219
T+++G L V E+EL F +YGDV S+ + + C FV R DA +AL L + +
Sbjct: 260 TVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQFVSRTDAEEALQGLNGSVI 319
Query: 220 QGKTITLAWA 229
+ + L+W
Sbjct: 320 GKQAVRLSWG 329
>gi|224124344|ref|XP_002319308.1| predicted protein [Populus trichocarpa]
gi|222857684|gb|EEE95231.1| predicted protein [Populus trichocarpa]
Length = 344
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q G + +TT+++G L V ++ L F +YG++V + + + C FV R A
Sbjct: 256 QGNQGESDPNNTTIFVGALDPSVTDDTLRAVFSKYGELVHVKIPAGKRCGFVQFANRTCA 315
Query: 208 AKALYKLKNTKLQGKTITLAWA 229
+AL L T++ G+ I L+W
Sbjct: 316 EQALSMLNGTQIAGQNIRLSWG 337
>gi|153874940|ref|ZP_02002958.1| RNA-binding protein [Beggiatoa sp. PS]
gi|152068596|gb|EDN67042.1| RNA-binding protein [Beggiatoa sp. PS]
Length = 89
Score = 51.2 bits (121), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 49/83 (59%), Gaps = 6/83 (7%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMNRRQDAAKALYKL 214
+++G+LS + EEEL + F EYG++ ++NLI +G AFV M ++ DA A+ +L
Sbjct: 3 IYVGNLSYSMTEEELKEIFTEYGEISTVNLITDKYTGQSKGFAFVEMVKQADAETAIKEL 62
Query: 215 KNTKLQGKTITLAWAPGKGMKDK 237
++G +I + A +G K +
Sbjct: 63 NGKTIKGMSIKVNQARPRGEKPR 85
>gi|289741767|gb|ADD19631.1| putative RNA-binding protein [Glossina morsitans morsitans]
Length = 415
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 42/72 (58%), Gaps = 1/72 (1%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT- 217
TTL++G+L + + E + D F +YG++ SI L+P + CAFV +R + A K N
Sbjct: 232 TTLYVGNLPEDITEPMIRDNFYQYGEIRSIALVPRQQCAFVQYTKRSASELAAEKTFNKL 291
Query: 218 KLQGKTITLAWA 229
+ G IT+ WA
Sbjct: 292 VIGGHKITIKWA 303
>gi|242824554|ref|XP_002488282.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
gi|218713203|gb|EED12628.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces stipitatus ATCC 10500]
Length = 392
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 127 IHPLFDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVV 186
I+P M P + Q N + +TT+++G LS V E+EL F +G++
Sbjct: 252 IYPPAAMGGPPMGFY---GAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEIT 308
Query: 187 SINLIPPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+ + P +GC FV +R A A+ +++ + + L+W
Sbjct: 309 YVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 351
>gi|115453831|ref|NP_001050516.1| Os03g0569900 [Oryza sativa Japonica Group]
gi|113548987|dbj|BAF12430.1| Os03g0569900, partial [Oryza sativa Japonica Group]
Length = 446
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V +E L F YG++V + + + C FV + R A +A+ L +
Sbjct: 311 NTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGS 370
Query: 218 KLQGKTITLAWAPGKGMK 235
+L G++I L+W G K
Sbjct: 371 QLGGQSIRLSWGRSPGNK 388
>gi|108709398|gb|ABF97193.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
Length = 406
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V +E L F YG++V + + + C FV + R A +A+ L +
Sbjct: 267 NTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGS 326
Query: 218 KLQGKTITLAWAPGKGMK 235
+L G++I L+W G K
Sbjct: 327 QLGGQSIRLSWGRSPGNK 344
>gi|427796663|gb|JAA63783.1| Hypothetical protein, partial [Rhipicephalus pulchellus]
Length = 965
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/108 (25%), Positives = 47/108 (43%), Gaps = 29/108 (26%)
Query: 131 FDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL 190
FD DPN +T L++G+L+ + E+EL + FG YG + S+ +
Sbjct: 188 FDTGDPN--------------------TTNLYLGNLNPKMTEQELCEIFGRYGPLASVKI 227
Query: 191 IPPRG---------CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+ PR C FV R+D +A+ L ++ G + + W
Sbjct: 228 MWPRSQEERQRKRNCGFVAYMNRKDGERAIKHLSGQEVMGFEMKMGWG 275
>gi|2078531|gb|AAC53171.1| Mlark [Mus musculus]
Length = 367
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
+ QGK T L APG G
Sbjct: 135 EFQGKRMHVQLSTSRLRTAPGMG 157
>gi|50292159|ref|XP_448512.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527824|emb|CAG61473.1| unnamed protein product [Candida glabrata]
Length = 802
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 40/73 (54%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
+TT+++G L VQE++L F +G+++SI + P + C FV + DA A+ L+
Sbjct: 465 TNTTVFVGGLGPTVQEQQLRKIFQPFGNILSIKIPPGKNCGFVKFEHKIDAEAAIQGLQG 524
Query: 217 TKLQGKTITLAWA 229
L I L+W
Sbjct: 525 FVLVENPIRLSWG 537
>gi|189197507|ref|XP_001935091.1| mRNA binding post-transcriptional regulator (Csx1) [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187981039|gb|EDU47665.1| mRNA binding post-transcriptional regulator (Csx1) [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 490
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%)
Query: 139 PIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAF 198
P+ Q N + +TT+++G LS V E+EL F +G++ + + P +GC F
Sbjct: 288 PMGGYYGTPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGF 347
Query: 199 VCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
V +R A A+ +++ + + L+W
Sbjct: 348 VQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 378
>gi|317419983|emb|CBN82019.1| U2-associated protein SR140 [Dicentrarchus labrax]
Length = 965
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPP---------RGCAFVCMNR 203
V + +T L++G+++ + EE L FG YG + S+ ++ P R C FV
Sbjct: 197 VGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFVAFMN 256
Query: 204 RQDAAKALYKLKNTKLQGKTITLAWAPG 231
R+DA +AL L + + L W G
Sbjct: 257 RRDAERALKNLNGKMIMNFEMKLGWGKG 284
>gi|133711805|gb|ABO36623.1| putative RNA-binding protein [Solanum lycopersicum]
Length = 479
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT-K 218
TL++G + + E++L D F +G++ SI ++ RGCAFV R+ A KA +L N
Sbjct: 229 TLYVGGVDARITEQDLRDHFYAHGEIESIKMVVQRGCAFVTYTTREGAVKAAEELANKLV 288
Query: 219 LQGKTITLAWA 229
++G + L W
Sbjct: 289 IKGLRLKLLWG 299
>gi|12583812|gb|AAG59664.1|AC084319_22 putative RNA binding protein [Oryza sativa Japonica Group]
gi|108709397|gb|ABF97192.1| RNA recognition motif family protein, expressed [Oryza sativa
Japonica Group]
gi|215678704|dbj|BAG95141.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 402
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V +E L F YG++V + + + C FV + R A +A+ L +
Sbjct: 267 NTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGS 326
Query: 218 KLQGKTITLAWAPGKGMK 235
+L G++I L+W G K
Sbjct: 327 QLGGQSIRLSWGRSPGNK 344
>gi|330935675|ref|XP_003305076.1| hypothetical protein PTT_17823 [Pyrenophora teres f. teres 0-1]
gi|311318022|gb|EFQ86789.1| hypothetical protein PTT_17823 [Pyrenophora teres f. teres 0-1]
Length = 471
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 45/91 (49%)
Query: 139 PIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAF 198
P+ Q N + +TT+++G LS V E+EL F +G++ + + P +GC F
Sbjct: 269 PMGGYYGTPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGF 328
Query: 199 VCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
V +R A A+ +++ + + L+W
Sbjct: 329 VQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 359
>gi|2078529|gb|AAC51293.1| Hlark [Homo sapiens]
Length = 366
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNKELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
+ QGK T L APG G
Sbjct: 135 EFQGKRMHVQLSTSRLRTAPGMG 157
>gi|218193173|gb|EEC75600.1| hypothetical protein OsI_12307 [Oryza sativa Indica Group]
Length = 406
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V +E L F YG++V + + + C FV + R A +A+ L +
Sbjct: 267 NTTVFVGGLDPSVTDEVLKQAFSPYGELVYVKIPVGKRCGFVQYSNRASAEEAIRMLNGS 326
Query: 218 KLQGKTITLAWAPGKGMK 235
+L G++I L+W G K
Sbjct: 327 QLGGQSIRLSWGRSPGNK 344
>gi|356550323|ref|XP_003543537.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 410
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/103 (24%), Positives = 51/103 (49%), Gaps = 3/103 (2%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++ +TT+++G+L V EEEL ++G++VS+ + P +G FV R A +A+ K+
Sbjct: 223 DVNNTTIFVGNLDLNVSEEELKQNSLQFGEIVSVKIQPGKGFGFVQFGTRASAEEAIQKM 282
Query: 215 KNTKLQGKTITLAWA---PGKGMKDKDWKDFWEVQDGVSYIPY 254
+ + + + ++W + M W ++ G Y
Sbjct: 283 QGKMIGQQVVRISWGRTLTARQMDPNQWSAYYGYGQGYEAYAY 325
Score = 42.4 bits (98), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 144 LAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCA 197
+A Q + +E + TLWIG L V E LS FG G+V+SI +I P G
Sbjct: 1 MASYQQASTIEEV--RTLWIGDLQYWVDEGYLSHCFGHTGEVISIKIIRNKLTGQPEGYG 58
Query: 198 FVCMNRRQDAAKALYKLKNTKLQG--KTITLAWA 229
FV A + L T++ +T L WA
Sbjct: 59 FVEFVSHAAAERVLQTYNGTQMPATDQTFRLNWA 92
>gi|351710884|gb|EHB13803.1| RNA-binding protein 4 [Heterocephalus glaber]
Length = 318
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNKELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
+ QGK T L APG G
Sbjct: 135 EFQGKRMHVQLSTSRLRTAPGMG 157
>gi|62318594|dbj|BAD95007.1| hypothetical protein [Arabidopsis thaliana]
Length = 130
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
S LW+G L+ E +L++ FG YGD+ I + RG AF+ ++A A L+
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAAKEALQGA 76
Query: 218 KLQGKTITLAWA 229
L G I + +A
Sbjct: 77 NLNGSQIKIEYA 88
>gi|451994897|gb|EMD87366.1| hypothetical protein COCHEDRAFT_1113919 [Cochliobolus
heterostrophus C5]
Length = 675
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 68/142 (47%), Gaps = 15/142 (10%)
Query: 1 MDVIKTFNQELSSLYDTKPP-ISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYK 59
M + +L SL KPP ++ KI IT+ + I+ + +VQ + + + +K
Sbjct: 1 MAAMDELGTQLQSLQALKPPGVTPTKIKTITQLCVDNIQSHPVIVQKIAQQLQNSAVTHK 60
Query: 60 VPALYVIDSLVRQ------------SRHQFQDKDVFGPRFARN-LKATFQHLYQCPPE-D 105
+ LYV+D++ RQ S++ G + R+ L A +L Q PE
Sbjct: 61 LGVLYVVDAVARQWVERAKQAGQTVSKNAVPGTYASGVQMMRDVLPAMMMNLIQSAPETQ 120
Query: 106 KSKIIRVLNLWQKNEVFTPDII 127
K KI +++++W++ + F D++
Sbjct: 121 KEKISKLIDIWERGQTFPHDML 142
>gi|224164480|ref|XP_002196784.1| PREDICTED: RNA-binding protein 4B-like, partial [Taeniopygia
guttata]
Length = 333
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 10/111 (9%)
Query: 137 NHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGC 196
+H +H ++A ++ ST L +G++S EL F EYG V+ +++ +
Sbjct: 57 HHKLHGVCINVEASKN-KSKASTKLHVGNISPACTNLELRAKFEEYGPVIECDIV--KDY 113
Query: 197 AFVCMNRRQDAAKALYKLKNTKLQGK-------TITLAWAPGKGMKDKDWK 240
AFV M R +DA +A+ L NT+ QGK T L PG G K ++
Sbjct: 114 AFVHMERAEDAVEAIRGLDNTEFQGKRMRVQLSTSRLRTVPGMGDKSSCYR 164
>gi|255558830|ref|XP_002520438.1| RNA binding motif protein, putative [Ricinus communis]
gi|223540280|gb|EEF41851.1| RNA binding motif protein, putative [Ricinus communis]
Length = 285
Score = 51.2 bits (121), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT-K 218
TL++G L + E++L D F +G++ SI ++P R AFV R+ A KA +L N
Sbjct: 47 TLYVGGLDARITEQDLRDNFYAHGEIESIKMVPQRAIAFVTYTTREGAEKAAEELSNKLV 106
Query: 219 LQGKTITLAWA 229
++G + L W
Sbjct: 107 IKGLRLKLMWG 117
>gi|47223423|emb|CAG04284.1| unnamed protein product [Tetraodon nigroviridis]
Length = 964
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPP---------RGCAFVCMNR 203
V + +T L++G+++ + EE L FG YG + S+ ++ P R C FV
Sbjct: 189 VGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFVAFMN 248
Query: 204 RQDAAKALYKLKNTKLQGKTITLAWAPG 231
R+DA +AL L + + L W G
Sbjct: 249 RRDAERALKHLNGKMIMNFEMKLGWGKG 276
>gi|353238970|emb|CCA70899.1| related to polyadenylate-binding protein [Piriformospora indica DSM
11827]
Length = 944
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS L+ EE L F +G + + + P + C FV ++ DA +A+ L
Sbjct: 401 NTTVFVGGLSPLISEETLRTFFAPFGAIHYVKVPPGKSCGFVQFVKKSDAERAIEALSGF 460
Query: 218 KLQGKTITLAWA 229
+ G + L+W
Sbjct: 461 SIAGSKVRLSWG 472
>gi|449471899|ref|XP_004153439.1| PREDICTED: flowering time control protein FPA-like [Cucumis
sativus]
Length = 1000
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 137 NHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGC 196
+ P+HR+ + V M S +LW+G+LS V + +L + F ++G + S+ P R
Sbjct: 8 SRPLHRD-------SDVPEMPSNSLWVGNLSMEVTDGDLMNLFAQFGGIDSVTSYPSRSY 60
Query: 197 AFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA-PGK 232
AF+ +DA A L+ L+G +I + +A P K
Sbjct: 61 AFIFFKHMEDAQAAKEALQGYFLRGNSIKIEFARPAK 97
Score = 47.8 bits (112), Expect = 0.005, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKLQ 220
LW+G +S V E+L + F ++G + + R AFV R +DA++AL + ++
Sbjct: 102 LWVGGISPAVSREQLEEEFSKFGKIDEFKFLRDRNTAFVEYVRLEDASQALRMMNGKRIG 161
Query: 221 GKTITLAWAPGKGMKDKDWKD 241
G+ + + + + M+ W D
Sbjct: 162 GEQLRVDFLRSQPMRRDQWPD 182
>gi|396480654|ref|XP_003841045.1| hypothetical protein LEMA_P089750.1 [Leptosphaeria maculans JN3]
gi|312217619|emb|CBX97566.1| hypothetical protein LEMA_P089750.1 [Leptosphaeria maculans JN3]
Length = 433
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q N + +TT+++G LS V E+EL F +G++ + + P +GC FV +R A
Sbjct: 285 QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAA 344
Query: 208 AKALYKLKNTKLQGKTITLAWA 229
A+ +++ + + L+W
Sbjct: 345 EMAINQMQGYPIGNSRVRLSWG 366
>gi|449454582|ref|XP_004145033.1| PREDICTED: flowering time control protein FPA-like [Cucumis
sativus]
Length = 999
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 30/97 (30%), Positives = 51/97 (52%), Gaps = 8/97 (8%)
Query: 137 NHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGC 196
+ P+HR+ + V M S +LW+G+LS V + +L + F ++G + S+ P R
Sbjct: 8 SRPLHRD-------SDVPEMPSNSLWVGNLSMEVTDGDLMNLFAQFGGIDSVTSYPSRSY 60
Query: 197 AFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA-PGK 232
AF+ +DA A L+ L+G +I + +A P K
Sbjct: 61 AFIFFKHMEDAQAAKEALQGYFLRGNSIKIEFARPAK 97
Score = 47.8 bits (112), Expect = 0.006, Method: Composition-based stats.
Identities = 22/81 (27%), Positives = 42/81 (51%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKLQ 220
LW+G +S V E+L + F ++G + + R AFV R +DA++AL + ++
Sbjct: 102 LWVGGISPAVSREQLEEEFSKFGKIDEFKFLRDRNTAFVEYVRLEDASQALRMMNGKRIG 161
Query: 221 GKTITLAWAPGKGMKDKDWKD 241
G+ + + + + M+ W D
Sbjct: 162 GEQLRVDFLRSQPMRRDQWPD 182
>gi|443919574|gb|ELU39701.1| RNA recognition motif domain-containing protein [Rhizoctonia solani
AG-1 IA]
Length = 716
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 54/104 (51%), Gaps = 8/104 (7%)
Query: 132 DMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI 191
D++ P P + A++ + E+ STTL++G+LS E+ L FGE+GDV + L
Sbjct: 184 DISQPRQPNPEKRAQVFGDS--ESQPSTTLFVGNLSWNTTEDGLWTAFGEFGDVTHVRLP 241
Query: 192 P------PRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
P+G +V ++ A KA +K L G+T+ L ++
Sbjct: 242 TDQESGKPKGFGYVEFGDQEGATKAYEAMKGKDLDGRTLRLDYS 285
>gi|410909191|ref|XP_003968074.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Takifugu rubripes]
Length = 974
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 11/91 (12%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPP---------RGCAFVCMNR 203
V + +T L++G+++ + EE L FG YG + S+ ++ P R C FV
Sbjct: 205 VGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFVAFMN 264
Query: 204 RQDAAKALYKLKNTKLQGKTITLAWAPGKGM 234
R+DA +AL L + + L W GKG+
Sbjct: 265 RRDAERALKHLNGKMIMNFEMKLGW--GKGV 293
>gi|425773059|gb|EKV11433.1| MRNA binding post-transcriptional regulator (Csx1), putative
[Penicillium digitatum Pd1]
gi|425778836|gb|EKV16941.1| MRNA binding post-transcriptional regulator (Csx1), putative
[Penicillium digitatum PHI26]
Length = 408
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q N + +TT+++G LS V E+EL F +G++ + + P +GC FV +R A
Sbjct: 273 QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAA 332
Query: 208 AKALYKLKNTKLQGKTITLAWA 229
A+ +++ + + L+W
Sbjct: 333 EMAINQMQGYPIGNSRVRLSWG 354
>gi|115471551|ref|NP_001059374.1| Os07g0281000 [Oryza sativa Japonica Group]
gi|75325391|sp|Q6Z358.1|C3H49_ORYSJ RecName: Full=Zinc finger CCCH domain-containing protein 49;
Short=OsC3H49
gi|34394813|dbj|BAC84225.1| RRM-containing RNA-binding protein-like [Oryza sativa Japonica
Group]
gi|113610910|dbj|BAF21288.1| Os07g0281000 [Oryza sativa Japonica Group]
gi|222636833|gb|EEE66965.1| hypothetical protein OsJ_23846 [Oryza sativa Japonica Group]
Length = 486
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 49/93 (52%), Gaps = 3/93 (3%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT-K 218
TL+IG L V E++L D F +G++ +I ++ R CAFV R+ A KA +L N
Sbjct: 229 TLYIGGLDSRVTEQDLRDQFYAHGEIETIRMVLQRACAFVTYTTREGAEKAAEELANKLV 288
Query: 219 LQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSY 251
++G + L W GK K +D Q V++
Sbjct: 289 IKGVRLKLMW--GKPQAPKPEEDEAGRQGHVAH 319
>gi|366996152|ref|XP_003677839.1| hypothetical protein NCAS_0H01810 [Naumovozyma castellii CBS 4309]
gi|342303709|emb|CCC71491.1| hypothetical protein NCAS_0H01810 [Naumovozyma castellii CBS 4309]
Length = 443
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT++IG LS LV E++L F +GD++ + + +GC FV R A A+ K++
Sbjct: 282 NTTVFIGGLSSLVSEDDLRQYFQPFGDIIYVKIPTGKGCGFVQYVDRLSAELAISKMQGF 341
Query: 218 KLQGKTITLAWA 229
L I L+W
Sbjct: 342 PLANSRIRLSWG 353
>gi|315043939|ref|XP_003171345.1| RNA-binding post-transcriptional regulator csx1 [Arthroderma
gypseum CBS 118893]
gi|311343688|gb|EFR02891.1| RNA-binding post-transcriptional regulator csx1 [Arthroderma
gypseum CBS 118893]
Length = 412
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 145 AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRR 204
A Q N + +TT+++G LS V E+EL F +G++ + + P +GC FV +R
Sbjct: 283 AAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 342
Query: 205 QDAAKALYKLKNTKLQGKTITLAWA 229
A A+ +++ + + L+W
Sbjct: 343 HAAEMAINQMQGYPIGNSRVRLSWG 367
>gi|226504372|ref|NP_001141359.1| uncharacterized protein LOC100273450 [Zea mays]
gi|194704160|gb|ACF86164.1| unknown [Zea mays]
gi|413921127|gb|AFW61059.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 453
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V E+ L F YGDVV + + + C FV R A +AL L+ T
Sbjct: 314 NTTIFVGGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRCGFVQYANRSSAEEALVILQGT 373
Query: 218 KLQGKTITLAWAPGKGMKDKDWKD 241
+ G+ + L+W G+ +K +D
Sbjct: 374 LVGGQNVRLSW--GRSPSNKQVQD 395
>gi|195456590|ref|XP_002075201.1| GK16696 [Drosophila willistoni]
gi|194171286|gb|EDW86187.1| GK16696 [Drosophila willistoni]
Length = 508
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMN 202
AR G +++ T L++ +LS+ + +E L F +G +V N++ PRG AFV N
Sbjct: 188 ARPGGQSIKDTNLYVINLSRNINDEMLDRIFSPFGQIVQRNILRDKLTGRPRGVAFVRYN 247
Query: 203 RRQDAAKALYKLKNTKLQGKT----ITLAWAPGK 232
+R++A +A+ L NT +G + + LA GK
Sbjct: 248 KREEAQEAIKSLNNTIPEGGSQPIWVRLAEEHGK 281
>gi|224106327|ref|XP_002314131.1| predicted protein [Populus trichocarpa]
gi|222850539|gb|EEE88086.1| predicted protein [Populus trichocarpa]
Length = 139
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 151 NGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKA 210
N E+ TL++G L + E+ LSD F +G++ SI ++P R AFV R+ A KA
Sbjct: 27 NPPEDESIKTLYVGGLDARISEQHLSDHFYAHGEIESIKMVPHRAIAFVTYTTREGAEKA 86
Query: 211 LYKLKNT-KLQGKTITLAWA 229
+L + ++G + L W+
Sbjct: 87 AEQLADKLVIKGPRLKLRWS 106
>gi|409050510|gb|EKM59987.1| hypothetical protein PHACADRAFT_250820 [Phanerochaete carnosa
HHB-10118-sp]
Length = 643
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTK 218
TT+++G LS L+ EE L F +G++ + + + C FV R+ DA +A+ K++
Sbjct: 309 TTVFVGGLSPLISEETLRTFFAPFGEIHYVKVPVGKHCGFVQFVRKPDAERAIEKMQGFP 368
Query: 219 LQGKTITLAWA 229
+ G I L+W
Sbjct: 369 IGGSRIRLSWG 379
>gi|357166074|ref|XP_003580589.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Brachypodium distachyon]
Length = 426
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V E+ L F YG+V+ + + + C FV R A +AL L+ T
Sbjct: 283 NTTIFVGGLDPNVTEDALKQVFAPYGEVIHVKIPVGKRCGFVQFVNRPSAEQALQMLQGT 342
Query: 218 KLQGKTITLAWA 229
+ G+ + L+W
Sbjct: 343 PIGGQNVRLSWG 354
>gi|302511659|ref|XP_003017781.1| hypothetical protein ARB_04665 [Arthroderma benhamiae CBS 112371]
gi|291181352|gb|EFE37136.1| hypothetical protein ARB_04665 [Arthroderma benhamiae CBS 112371]
Length = 428
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 145 AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRR 204
A Q N + +TT+++G LS V E+EL F +G++ + + P +GC FV +R
Sbjct: 302 AAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 361
Query: 205 QDAAKALYKLKNTKLQGKTITLAWA 229
A A+ +++ + + L+W
Sbjct: 362 HAAEMAINQMQGYPIGNSRVRLSWG 386
>gi|126338772|ref|XP_001364800.1| PREDICTED: RNA-binding protein 4B-like [Monodelphis domestica]
Length = 365
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
ST L +G++S EL F EYG V+ +++ + AFV M R +DA +A+ L N
Sbjct: 76 ASTKLHVGNISSACTNLELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDN 133
Query: 217 TKLQGK-------TITLAWAPGKG 233
T+ QGK T L APG G
Sbjct: 134 TEFQGKRMHVQLSTSRLRTAPGMG 157
>gi|83774240|dbj|BAE64365.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 488
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q N + +TT+++G LS V E+EL F +G++ + + P +GC FV +R A
Sbjct: 273 QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAA 332
Query: 208 AKALYKLKNTKLQGKTITLAWA 229
A+ +++ + + L+W
Sbjct: 333 EMAINQMQGYPIGNSRVRLSWG 354
Score = 37.4 bits (85), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 43/91 (47%), Gaps = 9/91 (9%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPR------GCAFVCMNRRQDAAKALY 212
TTLW+G L + E + + + + G+ V++ +I + G FV + AAKAL
Sbjct: 64 TTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFSSPAAAAKAL- 122
Query: 213 KLKNTKL--QGKTITLAWAPGKGMKDKDWKD 241
L T + + L WA G G+ D+ D
Sbjct: 123 SLNGTPMPNTNRLFKLNWATGGGLADRSRDD 153
>gi|224099981|ref|XP_002311696.1| predicted protein [Populus trichocarpa]
gi|118486835|gb|ABK95252.1| unknown [Populus trichocarpa]
gi|222851516|gb|EEE89063.1| predicted protein [Populus trichocarpa]
Length = 279
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 6/78 (7%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMNRRQDAAKALYKL 214
L+IG+LS V E L+ F EYG+VV ++ RG FVC + +++ AL L
Sbjct: 200 LFIGNLSWSVTSESLTQAFQEYGNVVGARVLYDGETGKSRGYGFVCYSTKEELETALQSL 259
Query: 215 KNTKLQGKTITLAWAPGK 232
+L+G+ + ++ A G+
Sbjct: 260 NGVELEGRALRVSLAEGR 277
>gi|320165313|gb|EFW42212.1| nucleic acid binding protein [Capsaspora owczarzaki ATCC 30864]
Length = 1042
Score = 50.8 bits (120), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/80 (31%), Positives = 43/80 (53%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALY 212
V++ +TT+++G LS V EEL F +GD+V + + + C FV + +A +A+
Sbjct: 578 VDDSINTTVYVGGLSPHVSAEELKAIFSLFGDIVGVRIPQGKACGFVQFAQHGNAEQAIA 637
Query: 213 KLKNTKLQGKTITLAWAPGK 232
L + G+ I L+W K
Sbjct: 638 HLNGQYIGGQPIRLSWGHHK 657
>gi|255954935|ref|XP_002568220.1| Pc21g11890 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589931|emb|CAP96086.1| Pc21g11890 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 408
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q N + +TT+++G LS V E+EL F +G++ + + P +GC FV +R A
Sbjct: 273 QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAA 332
Query: 208 AKALYKLKNTKLQGKTITLAWA 229
A+ +++ + + L+W
Sbjct: 333 EMAINQMQGYPIGNSRVRLSWG 354
>gi|194702946|gb|ACF85557.1| unknown [Zea mays]
gi|413921126|gb|AFW61058.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 456
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V E+ L F YGDVV + + + C FV R A +AL L+ T
Sbjct: 314 NTTIFVGGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRCGFVQYANRSSAEEALVILQGT 373
Query: 218 KLQGKTITLAWA 229
+ G+ + L+W
Sbjct: 374 LVGGQNVRLSWG 385
>gi|398412748|ref|XP_003857692.1| hypothetical protein MYCGRDRAFT_65137 [Zymoseptoria tritici IPO323]
gi|339477577|gb|EGP92668.1| hypothetical protein MYCGRDRAFT_65137 [Zymoseptoria tritici IPO323]
Length = 437
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q N + +TT+++G LS V E+EL F +G++ + + P +GC FV +R A
Sbjct: 289 QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAA 348
Query: 208 AKALYKLKNTKLQGKTITLAWA 229
A+ +++ + + L+W
Sbjct: 349 EMAINQMQGYPIGNSRVRLSWG 370
>gi|82915524|ref|XP_729110.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23485977|gb|EAA20675.1| Drosophila melanogaster LD23810p [Plasmodium yoelii yoelii]
Length = 690
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG---------CAFVCMNRRQ 205
N L++G+LS V EE L FG++G V S+ ++ PR FVC ++
Sbjct: 170 NETLANLYLGNLSAEVTEEYLCQRFGKFGKVSSVKIMYPRKEEDKKKGRISGFVCFENKE 229
Query: 206 DAAKALYKLKNTKLQGKTITLAWAPG 231
DA A L ++ GK + + W+
Sbjct: 230 DAENAKDALDGVEMFGKPVIIGWSKA 255
>gi|413921124|gb|AFW61056.1| hypothetical protein ZEAMMB73_234884 [Zea mays]
Length = 453
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V E+ L F YGDVV + + + C FV R A +AL L+ T
Sbjct: 304 NTTIFVGGLDPNVTEDMLKQVFTPYGDVVHVKIPVGKRCGFVQYANRSSAEEALVILQGT 363
Query: 218 KLQGKTITLAWA 229
+ G+ + L+W
Sbjct: 364 LVGGQNVRLSWG 375
>gi|224106323|ref|XP_002314129.1| predicted protein [Populus trichocarpa]
gi|222850537|gb|EEE88084.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 50.8 bits (120), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT-K 218
TL++G L + E++L D F +G++ SI ++P R AFV R+ A KA +L N
Sbjct: 229 TLYVGGLDARINEQDLRDQFYAHGEIESIKMVPQRAIAFVTYTTREGAEKAAAELSNRLV 288
Query: 219 LQGKTITLAWA 229
++G + L W
Sbjct: 289 IKGLRLKLMWG 299
>gi|212546039|ref|XP_002153173.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces marneffei ATCC 18224]
gi|210064693|gb|EEA18788.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Talaromyces marneffei ATCC 18224]
Length = 392
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 49/103 (47%), Gaps = 3/103 (2%)
Query: 127 IHPLFDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVV 186
I+P M P + Q N + +TT+++G LS V E+EL F +G++
Sbjct: 252 IYPPAAMGGPPMGFY---GAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEIT 308
Query: 187 SINLIPPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+ + P +GC FV +R A A+ +++ + + L+W
Sbjct: 309 YVKIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 351
>gi|432928337|ref|XP_004081149.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
[Oryzias latipes]
Length = 970
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPP---------RGCAFVCMNR 203
V + +T L++G+++ + EE L FG YG + S+ ++ P R C FV
Sbjct: 204 VGDPSTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFVAFMN 263
Query: 204 RQDAAKALYKLKNTKLQGKTITLAWAPG 231
R+DA +AL L + + L W G
Sbjct: 264 RRDAERALKHLNGKMIMNFEMKLGWGKG 291
>gi|297267337|ref|XP_001109416.2| PREDICTED: RNA-binding protein 4 isoform 5 [Macaca mulatta]
Length = 693
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 406 STKLHVGNISPTCTNKELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 463
Query: 218 KLQGK-------TITLAWAPGKG 233
+ QGK T L APG G
Sbjct: 464 EFQGKRMHVQLSTSRLRTAPGMG 486
>gi|361131740|gb|EHL03392.1| putative Uncharacterized RNA-binding protein C23E6.01c [Glarea
lozoyensis 74030]
Length = 391
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 130 LFDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSIN 189
++ M P P Q N + +TT+++G LS V E+EL F +G++ +
Sbjct: 254 MYSMGAP--PQLGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVK 311
Query: 190 LIPPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+ P +GC FV +R A A+ +++ + + L+W
Sbjct: 312 IPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 351
>gi|241953527|ref|XP_002419485.1| poly uridylate-binding protein, putative; poly(A)+ RNA-binding
protein, putative [Candida dubliniensis CD36]
gi|223642825|emb|CAX43080.1| poly uridylate-binding protein, putative [Candida dubliniensis
CD36]
Length = 497
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTK 218
TT+++G+++ Q++EL +G +V P RGCAFV + + AA A+ +L
Sbjct: 399 TTVYLGNIAHFTQQQELIPLLQNFGFIVDFKFHPERGCAFVKYDTHERAALAIIQLAGFN 458
Query: 219 LQGKTITLAWA 229
L G+ + W
Sbjct: 459 LNGRPLKCGWG 469
>gi|212275334|ref|NP_001130489.1| uncharacterized protein LOC100191587 [Zea mays]
gi|194689276|gb|ACF78722.1| unknown [Zea mays]
Length = 417
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKL 219
T+++G L V E+EL F +YGD+ S+ + + C FV R DA +AL L + +
Sbjct: 288 TVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFGKQCGFVQFVNRVDAEEALQGLNGSTI 347
Query: 220 QGKTITLAWA 229
+ I L+W
Sbjct: 348 GKQAIRLSWG 357
>gi|452982866|gb|EME82624.1| hypothetical protein MYCFIDRAFT_51313 [Pseudocercospora fijiensis
CIRAD86]
Length = 414
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 303 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 362
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 363 PIGNSRVRLSWG 374
>gi|403416664|emb|CCM03364.1| predicted protein [Fibroporia radiculosa]
Length = 948
Score = 50.8 bits (120), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS L+ EE L F +GD+ + + + C FV R+ DA +A+ K++
Sbjct: 613 NTTVFVGGLSPLISEETLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKPDAERAIEKMQGF 672
Query: 218 KLQGKTITLAWA 229
+ G I L+W
Sbjct: 673 PIGGSRIRLSWG 684
>gi|170058302|ref|XP_001864863.1| U2-associated SR140 protein [Culex quinquefasciatus]
gi|167877443|gb|EDS40826.1| U2-associated SR140 protein [Culex quinquefasciatus]
Length = 603
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 151 NGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG---------CAFVCM 201
NG N +T L++G+L+ + E+ L + FG+YG + SI ++ PR C FV
Sbjct: 178 NGDPN--TTNLYLGNLNPKISEQALMELFGKYGPLASIKIMWPRSEEERARGRNCGFVAY 235
Query: 202 NRRQDAAKALYKLKNTKLQGKTITLAWA 229
R+DA +AL L + + L W
Sbjct: 236 MSRRDAERALRALNGKDVMNYEMKLGWG 263
>gi|453086344|gb|EMF14386.1| RNA-binding domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 425
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 314 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 373
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 374 PIGNSRVRLSWG 385
>gi|224106319|ref|XP_002314127.1| predicted protein [Populus trichocarpa]
gi|222850535|gb|EEE88082.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT-K 218
TL++G L + E++L D F +G++ SI ++P R AFV R+ A KA +L N
Sbjct: 229 TLYVGGLDARINEQDLRDQFYAHGEIESIKMVPQRAIAFVTYTTREGAEKAAAELSNRLV 288
Query: 219 LQGKTITLAWA 229
++G + L W
Sbjct: 289 IKGLRLKLMWG 299
>gi|58266842|ref|XP_570577.1| mRNA catabolism, nonsense-mediated-related protein [Cryptococcus
neoformans var. neoformans JEC21]
gi|134110468|ref|XP_776061.1| hypothetical protein CNBD1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258729|gb|EAL21414.1| hypothetical protein CNBD1090 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57226810|gb|AAW43270.1| mRNA catabolism, nonsense-mediated-related protein, putative
[Cryptococcus neoformans var. neoformans JEC21]
Length = 434
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G+L + +L F YG +V I + RG AFV ++ Q+AA A+ L+N
Sbjct: 256 NTTVYVGNLIPYTTQADLIPLFQGYGYIVEIRMQADRGFAFVKLDTHQNAALAITHLQNQ 315
Query: 218 KLQGKTITLAWAPGKG 233
+ G+ I +W KG
Sbjct: 316 LVHGRPIKCSWGKDKG 331
>gi|388579312|gb|EIM19637.1| hypothetical protein WALSEDRAFT_33897 [Wallemia sebi CBS 633.66]
Length = 423
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 44/72 (61%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT++IG+L+ + +L F +G ++ + + RG AFV ++ ++A+ A+ +L+ T
Sbjct: 220 NTTVYIGNLTPYTTQADLVPIFQAFGYIIEVRMQADRGFAFVKLDSHENASMAIVQLQGT 279
Query: 218 KLQGKTITLAWA 229
+QG+ I +W
Sbjct: 280 LIQGRPIKCSWG 291
>gi|67904206|ref|XP_682359.1| hypothetical protein AN9090.2 [Aspergillus nidulans FGSC A4]
gi|40742733|gb|EAA61923.1| hypothetical protein AN9090.2 [Aspergillus nidulans FGSC A4]
gi|67043519|gb|AAY63883.1| putative RNA binding protein [Emericella nidulans]
gi|259485498|tpe|CBF82571.1| TPA: Putative RNA binding proteinPutative uncharacterized protein ;
[Source:UniProtKB/TrEMBL;Acc:Q5ARJ0] [Aspergillus
nidulans FGSC A4]
Length = 393
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 285 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 344
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 345 PIGNSRVRLSWG 356
>gi|347840237|emb|CCD54809.1| hypothetical protein [Botryotinia fuckeliana]
Length = 218
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 106 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 165
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 166 PIGNSRVRLSWG 177
>gi|452844119|gb|EME46053.1| hypothetical protein DOTSEDRAFT_70146 [Dothistroma septosporum
NZE10]
Length = 407
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 295 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 354
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 355 PIGNSRVRLSWG 366
>gi|384916047|ref|ZP_10016247.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
gi|384526575|emb|CCG92118.1| RNA-binding protein (RRM domain) (fragment) [Methylacidiphilum
fumariolicum SolV]
Length = 99
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 156 MCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMNRRQDAAK 209
M T L++G+L + E +L + F +YG V INLI RG AFV M Q A
Sbjct: 1 MNRTRLYVGNLPFRISENDLRELFEQYGQVNEINLIVDKMTGQSRGFAFVTMETSQAAQS 60
Query: 210 ALYKLKNTKLQGKTITLAWA 229
A+ L T + G+ I + A
Sbjct: 61 AIDSLNGTSISGRQIVVNEA 80
>gi|242033859|ref|XP_002464324.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
gi|241918178|gb|EER91322.1| hypothetical protein SORBIDRAFT_01g016170 [Sorghum bicolor]
Length = 409
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V +E L TF YG+++ + + + C FV + R A +A+ L +
Sbjct: 273 NTTVFVGGLDPSVTDELLKQTFSPYGELLYVKIPVGKRCGFVQYSNRASAEEAIRMLNGS 332
Query: 218 KLQGKTITLAWA 229
+L G++I L+W
Sbjct: 333 QLGGQSIRLSWG 344
>gi|255574887|ref|XP_002528350.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
gi|223532218|gb|EEF34022.1| ribonucleoprotein, chloroplast, putative [Ricinus communis]
Length = 285
Score = 50.8 bits (120), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMNRRQDAAKALYKL 214
L++G+LS V E L + F EYG++V ++ RG FVC R + AL L
Sbjct: 206 LFVGNLSWSVTSESLVEAFQEYGNIVGARVLYDGETGRSRGYGFVCYATRSEMENALVSL 265
Query: 215 KNTKLQGKTITLAWAPGK 232
+L+G+ + ++ A GK
Sbjct: 266 NGVELEGRAMRVSLAQGK 283
>gi|452821584|gb|EME28613.1| U2-associated protein SR14 isoform 2 [Galdieria sulphuraria]
Length = 605
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPR---------GCAFVCMNRRQDAA 208
+T +++G+L+ EE L TFG +G V SI ++ PR FV R DA
Sbjct: 133 TTNIFLGNLNPSTTEETLLRTFGRFGPVGSIKIMYPRTPEEHLRGYNSGFVSFMERDDAE 192
Query: 209 KALYKLKNTKLQGKTITLAWA 229
AL L+ T L G + LAW
Sbjct: 193 AALEALQGTLLDGFLVRLAWG 213
>gi|242062048|ref|XP_002452313.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
gi|241932144|gb|EES05289.1| hypothetical protein SORBIDRAFT_04g023540 [Sorghum bicolor]
Length = 435
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKL 219
T+++G L V E+EL F +YGD+ S+ + + C FV R DA +AL L +
Sbjct: 304 TVYVGGLDPNVSEDELRKAFAKYGDLASVKIPFGKQCGFVQFVNRADAEEALQGLNGATI 363
Query: 220 QGKTITLAWA 229
+ + L+W
Sbjct: 364 GKQAVRLSWG 373
>gi|159480296|ref|XP_001698220.1| hypothetical protein CHLREDRAFT_193148 [Chlamydomonas reinhardtii]
gi|158273718|gb|EDO99505.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1212
Score = 50.4 bits (119), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 37/64 (57%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TTL++G LS V E+ L FG YG++ + + P +GC FV RQ A A+ ++ T
Sbjct: 118 NTTLFVGGLSAHVSEDALRGVFGRYGEISYVKIPPGKGCGFVHFADRQAAEYAMQEVNGT 177
Query: 218 KLQG 221
+ G
Sbjct: 178 IIGG 181
>gi|121709146|ref|XP_001272322.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus clavatus NRRL 1]
gi|119400471|gb|EAW10896.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus clavatus NRRL 1]
Length = 417
Score = 50.4 bits (119), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 285 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 344
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 345 PIGNSRVRLSWG 356
>gi|375152130|gb|AFA36523.1| nucleic acid binding protein, partial [Lolium perenne]
Length = 164
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKL 219
T+++G L V E+EL F +YGDV S+ + + C FV R DA +AL L + +
Sbjct: 77 TVYVGGLDPNVSEDELRKAFAKYGDVASVKIPLGKQCGFVQYVNRTDAKEALQGLNGSVI 136
Query: 220 QGKTITLAWA 229
+ + L+W
Sbjct: 137 GKQVVRLSWG 146
>gi|159478857|ref|XP_001697517.1| predicted protein [Chlamydomonas reinhardtii]
gi|158274396|gb|EDP00179.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1010
Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPP---------RGCAFVCMNRRQDAA 208
+T L++G+LS+ EE L FG +G + S+ ++ P R C FV +R DA
Sbjct: 215 TTNLYVGNLSQETDEEVLKREFGRFGAIASVKVMWPRDEEQRRKGRNCGFVGFMKRDDAE 274
Query: 209 KALYKLKNTKLQGKTITLAWA 229
A+ KL+ L G + + W
Sbjct: 275 MAMRKLQGIILHGNELHIGWG 295
>gi|327296686|ref|XP_003233037.1| hypothetical protein TERG_06034 [Trichophyton rubrum CBS 118892]
gi|326464343|gb|EGD89796.1| hypothetical protein TERG_06034 [Trichophyton rubrum CBS 118892]
Length = 224
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 44/85 (51%)
Query: 145 AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRR 204
A Q N + +TT+++G LS V E+EL F +G++ + + P +GC FV +R
Sbjct: 95 AAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQR 154
Query: 205 QDAAKALYKLKNTKLQGKTITLAWA 229
A A+ +++ + + L+W
Sbjct: 155 HAAEMAINQMQGYPIGNSRVRLSWG 179
>gi|195131747|ref|XP_002010307.1| GI14756 [Drosophila mojavensis]
gi|193908757|gb|EDW07624.1| GI14756 [Drosophila mojavensis]
Length = 325
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYK-LKNT 217
+TL++G+LS+ + E EL + F YG++ S+ L+P + AFV +R DA A +
Sbjct: 197 STLYVGNLSEQISEAELLNVFYPYGEIRSVTLVPRQSYAFVQYFKRSDAELAAERTFSKL 256
Query: 218 KLQGKTITLAWA 229
L+G+ + + WA
Sbjct: 257 SLKGRRLIIKWA 268
>gi|242073268|ref|XP_002446570.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
gi|241937753|gb|EES10898.1| hypothetical protein SORBIDRAFT_06g018280 [Sorghum bicolor]
Length = 423
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKL 219
T+++G L V E+EL F +YGD+ S+ + + C FV R DA +AL L + +
Sbjct: 296 TVYVGGLDPNVSEDELRKAFAKYGDLASVKIPLGKQCGFVQFASRTDAEEALQGLNGSLI 355
Query: 220 QGKTITLAWA 229
+ + L+W
Sbjct: 356 GKQAVRLSWG 365
>gi|225562584|gb|EEH10863.1| RNA-binding protein [Ajellomyces capsulatus G186AR]
Length = 427
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q N + +TT+++G LS V E+EL F +G++ + + P +GC FV +R A
Sbjct: 290 QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAA 349
Query: 208 AKALYKLKNTKLQGKTITLAWA 229
A+ +++ + + L+W
Sbjct: 350 EMAINQMQGYPIGNSRVRLSWG 371
>gi|452821583|gb|EME28612.1| U2-associated protein SR14 isoform 1 [Galdieria sulphuraria]
Length = 610
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 9/81 (11%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPR---------GCAFVCMNRRQDAA 208
+T +++G+L+ EE L TFG +G V SI ++ PR FV R DA
Sbjct: 138 TTNIFLGNLNPSTTEETLLRTFGRFGPVGSIKIMYPRTPEEHLRGYNSGFVSFMERDDAE 197
Query: 209 KALYKLKNTKLQGKTITLAWA 229
AL L+ T L G + LAW
Sbjct: 198 AALEALQGTLLDGFLVRLAWG 218
>gi|407925486|gb|EKG18497.1| hypothetical protein MPH_04299 [Macrophomina phaseolina MS6]
Length = 311
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 197 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 256
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 257 PIGNSRVRLSWG 268
>gi|391868084|gb|EIT77307.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 395
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 283 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 342
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 343 PIGNSRVRLSWG 354
>gi|328793609|ref|XP_397019.4| PREDICTED: u2 snRNP-associated SURP motif-containing protein-like
[Apis mellifera]
Length = 966
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 151 NGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPP---------RGCAFVCM 201
NG N +T L++G+L+ + E++L + FG+YG + SI ++ P R C FV
Sbjct: 219 NGDPN--TTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFVAF 276
Query: 202 NRRQDAAKALYKLKNTKLQGKTITLAWA 229
R+D +AL L + + L W
Sbjct: 277 MSRKDGERALKNLNGRDIMQYEMKLGWG 304
>gi|365987806|ref|XP_003670734.1| hypothetical protein NDAI_0F01720 [Naumovozyma dairenensis CBS 421]
gi|343769505|emb|CCD25491.1| hypothetical protein NDAI_0F01720 [Naumovozyma dairenensis CBS 421]
Length = 474
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 1/81 (1%)
Query: 150 RNGV-ENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAA 208
R G+ N ++T+++G LS V E+EL++ F +G+++ + + + C FV RR DA
Sbjct: 298 RQGLGSNSKNSTIFVGGLSTDVSEQELNELFRPFGEIMDVKIPLGKKCGFVTFKRRIDAK 357
Query: 209 KALYKLKNTKLQGKTITLAWA 229
A+ L ++G I L+W
Sbjct: 358 AAIKGLHGFLVRGCPIRLSWG 378
>gi|320587473|gb|EFW99953.1| mRNA-binding post-transcriptional regulator [Grosmannia clavigera
kw1407]
Length = 399
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/108 (25%), Positives = 46/108 (42%), Gaps = 20/108 (18%)
Query: 122 FTPDIIHPLFDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGE 181
F P P+ DPN+ TT+++G LS V E+EL F
Sbjct: 258 FGPMAPQPMNQFTDPNN--------------------TTVFVGGLSGYVTEDELRSFFQG 297
Query: 182 YGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+G++ + + P +GC FV R A A+ +++ + + L+W
Sbjct: 298 FGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGYPIGNSRVRLSWG 345
>gi|225461001|ref|XP_002280601.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Vitis vinifera]
Length = 417
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%)
Query: 147 IQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQD 206
Q G + +TT+++G L V ++ L F +YG++V + + + C FV R
Sbjct: 279 TQGNQGESDPNNTTIFVGGLDSNVTDDYLRQVFSQYGELVHVKIPVGKRCGFVQFANRAC 338
Query: 207 AAKALYKLKNTKLQGKTITLAWA 229
A +AL L T+L ++I L+W
Sbjct: 339 AEQALAGLNGTQLGAQSIRLSWG 361
>gi|350410108|ref|XP_003488948.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 1 [Bombus impatiens]
Length = 937
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 151 NGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG---------CAFVCM 201
NG N +T L++G+L+ + E++L + FG+YG + SI ++ PR C FV
Sbjct: 190 NGDPN--TTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFVAF 247
Query: 202 NRRQDAAKALYKLKNTKLQGKTITLAWA 229
R+D +AL L + + L W
Sbjct: 248 MSRKDGERALKNLNGRDIMQYEMKLGWG 275
>gi|224093058|ref|XP_002309788.1| predicted protein [Populus trichocarpa]
gi|222852691|gb|EEE90238.1| predicted protein [Populus trichocarpa]
Length = 806
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
S LW+G++S+ V E +L F +YG + ++ R FV R +DA +A L+ T
Sbjct: 6 SNNLWVGNISRDVTESDLMKLFAQYGSIDNVTTYTARSYGFVYFKRVEDAKQAKDALQGT 65
Query: 218 KLQGKTITLAWA 229
L+G I + +A
Sbjct: 66 SLRGNQIIIEFA 77
>gi|30679138|ref|NP_849537.1| splicing factor SR1B [Arabidopsis thaliana]
gi|26451203|dbj|BAC42705.1| unknown protein [Arabidopsis thaliana]
gi|332656771|gb|AEE82171.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 178
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL-IPPR--GCAFVCMNRRQDAAK 209
+ + S T+++G+L ++E E+ D F +YG VV I+L IPPR G AFV +DA
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 210 ALYKLKNTKLQGKTITLAWAPG 231
A+Y G + + A G
Sbjct: 61 AIYGRDGYDFDGHHLRVELAHG 82
>gi|397781445|ref|YP_006545918.1| RNA recognition motif-containing protein [Methanoculleus bourgensis
MS2]
gi|396939947|emb|CCJ37202.1| RNA recognition motif-containing protein [Methanoculleus bourgensis
MS2]
Length = 86
Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 44/71 (61%)
Query: 156 MCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLK 215
M S+ L++G+L+ V EE+L + F +YG V + +I +G FV M+ ++A KA L
Sbjct: 1 MESSKLYVGNLTYSVNEEQLKELFAQYGTVNDVRVIERKGFGFVEMSSPEEAEKAKEALN 60
Query: 216 NTKLQGKTITL 226
+T +G+T+ +
Sbjct: 61 DTVFEGRTLKI 71
>gi|308493359|ref|XP_003108869.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
gi|308247426|gb|EFO91378.1| hypothetical protein CRE_11982 [Caenorhabditis remanei]
Length = 404
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 132 DMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI 191
D P H + EI + +N T++++G+++ L E+E+ F YG + + +
Sbjct: 215 DQEKPTHYNEKSFDEIYNQTSGDN---TSVYVGNIANL-SEDEIRQAFASYGRISEVRIF 270
Query: 192 PPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+G AFV + + AAKA+ ++ N ++ G+ + +W
Sbjct: 271 KMQGYAFVKFDNKDAAAKAIVQMNNQEVGGQLVRCSWG 308
Score = 39.3 bits (90), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVS------INLIPPRGCAFVCMNRRQDAAKALYKL 214
+++G LS V ++L + F +GDV N +G FV +R++A +A+ ++
Sbjct: 135 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 194
Query: 215 KNTKLQGKTITLAWAPGK 232
L +TI WA K
Sbjct: 195 NGQWLGRRTIRTNWATRK 212
>gi|119489215|ref|XP_001262859.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Neosartorya fischeri NRRL 181]
gi|119411017|gb|EAW20962.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Neosartorya fischeri NRRL 181]
Length = 417
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 285 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 344
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 345 PIGNSRVRLSWG 356
>gi|84468322|dbj|BAE71244.1| putative DNA binding protein [Trifolium pratense]
Length = 402
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 41/72 (56%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G+L V ++ L F +YG++V + + + C FV + R A +A+ L T
Sbjct: 258 NTTIFVGNLDPNVTDDHLRQVFSQYGELVHVKIPSGKRCGFVQFSDRSSAEEAIRVLNGT 317
Query: 218 KLQGKTITLAWA 229
L G+ + L+W
Sbjct: 318 LLGGQNVRLSWG 329
>gi|340369158|ref|XP_003383115.1| PREDICTED: u2 snRNP-associated SURP motif-containing protein-like
[Amphimedon queenslandica]
Length = 854
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPR---------GCAFVCMNRRQDAA 208
+T L++G+++ + EE L FG++G + S+ ++ PR C FV +R DA
Sbjct: 211 TTNLYVGNINPKMTEEMLCQHFGKFGPLASVKIMWPRTEEEKSRNKNCGFVAYMKRPDAE 270
Query: 209 KALYKLKNTKLQGKTITLAWA 229
KAL K + + G + + W
Sbjct: 271 KALDATKGSSIMGYEVQIGWG 291
>gi|222423512|dbj|BAH19726.1| AT2G43410 [Arabidopsis thaliana]
Length = 901
Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
S LW+G L+ E +L++ FG YGD+ I + RG AF+ ++A A L+
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAAKEALQGA 76
Query: 218 KLQGKTITLAWA-PGKGMK 235
L G I + +A P K K
Sbjct: 77 NLNGSQIKIEYARPAKPCK 95
>gi|134079837|emb|CAK40970.1| unnamed protein product [Aspergillus niger]
Length = 402
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 286 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 345
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 346 PIGNSRVRLSWG 357
>gi|383849266|ref|XP_003700266.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 1 [Megachile rotundata]
Length = 967
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 151 NGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG---------CAFVCM 201
NG N +T L++G+L+ + E++L + FG+YG + SI ++ PR C FV
Sbjct: 219 NGDPN--TTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFVAF 276
Query: 202 NRRQDAAKALYKLKNTKLQGKTITLAWA 229
R+D +AL L + + L W
Sbjct: 277 MSRKDGERALKNLNGRDIMQYEMKLGWG 304
>gi|358374531|dbj|GAA91122.1| mRNA binding post-transcriptional regulator [Aspergillus kawachii
IFO 4308]
Length = 402
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 286 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 345
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 346 PIGNSRVRLSWG 357
>gi|350411267|ref|XP_003489292.1| PREDICTED: protein sex-lethal-like [Bombus impatiens]
Length = 356
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMN 202
AR E + T L++ +L + + E ++ D F +YG++V N++ PRG AFV +
Sbjct: 161 ARPSGEEIKETNLYVTNLPRNITESQIDDIFSKYGNIVQKNILKDKLTGLPRGVAFVRFD 220
Query: 203 RRQDAAKALYKLKNTKLQGKTITLA 227
+R++A +A+ +L T +G + L+
Sbjct: 221 KREEAQEAIARLHGTIPEGGSEPLS 245
>gi|317155988|ref|XP_001825498.2| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
oryzae RIB40]
Length = 404
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 284 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 343
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 344 PIGNSRVRLSWG 355
>gi|317033242|ref|XP_001395129.2| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
niger CBS 513.88]
gi|317033244|ref|XP_003188853.1| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
niger CBS 513.88]
Length = 399
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 287 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 346
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 347 PIGNSRVRLSWG 358
>gi|383849268|ref|XP_003700267.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 2 [Megachile rotundata]
Length = 936
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 151 NGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG---------CAFVCM 201
NG N +T L++G+L+ + E++L + FG+YG + SI ++ PR C FV
Sbjct: 190 NGDPN--TTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFVAF 247
Query: 202 NRRQDAAKALYKLKNTKLQGKTITLAWA 229
R+D +AL L + + L W
Sbjct: 248 MSRKDGERALKNLNGRDIMQYEMKLGWG 275
>gi|350410111|ref|XP_003488949.1| PREDICTED: U2 snRNP-associated SURP motif-containing protein-like
isoform 2 [Bombus impatiens]
Length = 968
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 151 NGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG---------CAFVCM 201
NG N +T L++G+L+ + E++L + FG+YG + SI ++ PR C FV
Sbjct: 219 NGDPN--TTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFVAF 276
Query: 202 NRRQDAAKALYKLKNTKLQGKTITLAWA 229
R+D +AL L + + L W
Sbjct: 277 MSRKDGERALKNLNGRDIMQYEMKLGWG 304
>gi|299115735|emb|CBN74300.1| RNA binding protein [Ectocarpus siliculosus]
Length = 875
Score = 50.4 bits (119), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/85 (34%), Positives = 40/85 (47%)
Query: 152 GVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKAL 211
G E ST + + +L + EL+ FG +GDV + L P + A V DA KA
Sbjct: 524 GAEERSSTVILVKNLPYSAEAAELAKRFGAFGDVGRVLLPPSKTVALVEFLAASDAKKAF 583
Query: 212 YKLKNTKLQGKTITLAWAPGKGMKD 236
+L + Q + L WAP K KD
Sbjct: 584 KRLACARFQHVLLYLEWAPLKAFKD 608
>gi|238498926|ref|XP_002380698.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus flavus NRRL3357]
gi|220693972|gb|EED50317.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus flavus NRRL3357]
Length = 427
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 43/82 (52%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q N + +TT+++G LS V E+EL F +G++ + + P +GC FV +R A
Sbjct: 297 QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAA 356
Query: 208 AKALYKLKNTKLQGKTITLAWA 229
A+ +++ + + L+W
Sbjct: 357 EMAINQMQGYPIGNSRVRLSWG 378
>gi|218195935|gb|EEC78362.1| hypothetical protein OsI_18120 [Oryza sativa Indica Group]
Length = 284
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMNRRQDAAKAL 211
ST L + HLS+ V E+ L + F YG+VV++ L PRG +V R DA KAL
Sbjct: 68 STVLHVDHLSRNVNEDHLKEIFENYGEVVNVELSMDRVVNLPRGYGYVEFKNRADAEKAL 127
Query: 212 YKLKNTKLQGKTITLAWA 229
L ++ G + + +A
Sbjct: 128 LYLDGGQIDGNVVKVRFA 145
>gi|169616740|ref|XP_001801785.1| hypothetical protein SNOG_11545 [Phaeosphaeria nodorum SN15]
gi|111060133|gb|EAT81253.1| hypothetical protein SNOG_11545 [Phaeosphaeria nodorum SN15]
Length = 408
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 285 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 344
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 345 PIGNSRVRLSWG 356
>gi|380026763|ref|XP_003697113.1| PREDICTED: LOW QUALITY PROTEIN: U2 snRNP-associated SURP
motif-containing protein-like [Apis florea]
Length = 944
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 151 NGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPP---------RGCAFVCM 201
NG N +T L++G+L+ + E++L + FG+YG + SI ++ P R C FV
Sbjct: 197 NGDPN--TTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFVAF 254
Query: 202 NRRQDAAKALYKLKNTKLQGKTITLAWA 229
R+D +AL L + + L W
Sbjct: 255 MSRKDGERALKNLNGRDIMQYEMKLGWG 282
>gi|340720343|ref|XP_003398600.1| PREDICTED: u2 snRNP-associated SURP motif-containing protein-like
isoform 1 [Bombus terrestris]
Length = 937
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 151 NGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG---------CAFVCM 201
NG N +T L++G+L+ + E++L + FG+YG + SI ++ PR C FV
Sbjct: 190 NGDPN--TTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFVAF 247
Query: 202 NRRQDAAKALYKLKNTKLQGKTITLAWA 229
R+D +AL L + + L W
Sbjct: 248 MSRKDGERALKNLNGRDIMQYEMKLGWG 275
>gi|301107790|ref|XP_002902977.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262098095|gb|EEY56147.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 382
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 152 GVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKAL 211
G E +TT+++G L E+EL FG G +VS+ + P RGC FV + ++ A A+
Sbjct: 188 GEEEGTNTTVFVGGLDPATTEDELRARFGALGAIVSVKVPPGRGCGFVQYSSKEAAEVAI 247
Query: 212 YKLKNTKLQG 221
++ + G
Sbjct: 248 SQMNGQAVSG 257
>gi|189218303|ref|YP_001938945.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
gi|189185161|gb|ACD82346.1| RNA-binding protein (RRM domain) [Methylacidiphilum infernorum V4]
Length = 143
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 156 MCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMNRRQDAAK 209
M T L++G+L + E +L + F +YG V INLI RG AFV M Q A
Sbjct: 44 MNRTRLYVGNLPFRISENDLREIFEQYGQVNEINLIVDKMTGQSRGFAFVTMESSQAAQS 103
Query: 210 ALYKLKNTKLQGKTITLAWA 229
A+ L + + G+ I + A
Sbjct: 104 AINNLNGSSVSGRQIVVNEA 123
>gi|350637619|gb|EHA25976.1| hypothetical protein ASPNIDRAFT_212792 [Aspergillus niger ATCC
1015]
Length = 403
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 287 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 346
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 347 PIGNSRVRLSWG 358
>gi|307166394|gb|EFN60531.1| U2-associated protein SR140 [Camponotus floridanus]
Length = 1023
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 151 NGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG---------CAFVCM 201
NG N +T L++G+L+ + E++L + FG+YG + SI ++ PR C FV
Sbjct: 278 NGDPN--TTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFVAF 335
Query: 202 NRRQDAAKALYKLKNTKLQGKTITLAWA 229
R+D +AL L + + L W
Sbjct: 336 MSRKDGERALKNLNGRDIMQYEMKLGWG 363
>gi|149491652|ref|XP_001512914.1| PREDICTED: RNA-binding protein 4B-like isoform 1 [Ornithorhynchus
anatinus]
Length = 365
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 55/117 (47%), Gaps = 18/117 (15%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNMELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKGMKDKDWK----DFWEVQDGVSYIPYDRLSKEIDY 263
+ QGK T L APG G + ++ W + P DR + D+
Sbjct: 135 EFQGKRMHVQLSTSRLRTAPGMGDQSGCYRCGKEGHWSKE-----CPVDRTGRVADF 186
>gi|340720345|ref|XP_003398601.1| PREDICTED: u2 snRNP-associated SURP motif-containing protein-like
isoform 2 [Bombus terrestris]
Length = 968
Score = 50.4 bits (119), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 151 NGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG---------CAFVCM 201
NG N +T L++G+L+ + E++L + FG+YG + SI ++ PR C FV
Sbjct: 219 NGDPN--TTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFVAF 276
Query: 202 NRRQDAAKALYKLKNTKLQGKTITLAWA 229
R+D +AL L + + L W
Sbjct: 277 MSRKDGERALKNLNGRDIMQYEMKLGWG 304
>gi|345561228|gb|EGX44324.1| hypothetical protein AOL_s00193g52 [Arthrobotrys oligospora ATCC
24927]
Length = 461
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 46/101 (45%)
Query: 129 PLFDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSI 188
P M P Q N + +TT+++G LS V E+EL F +G++ +
Sbjct: 248 PQMGMYTMGAPTMGYYGAPQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYV 307
Query: 189 NLIPPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+ P +GC FV +R A A+ +++ + + L+W
Sbjct: 308 KIPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 348
Score = 40.8 bits (94), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 50/115 (43%), Gaps = 12/115 (10%)
Query: 134 ADPNHPIHRELAEIQAR---NGVE-NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSIN 189
A+P P + A NG N TTLW+G L + E + + G+ V++
Sbjct: 29 ANPGQPPSQSPAPFNGNGSANGANGNDAKTTLWMGELEPWIDENFIRSVWYSLGEQVNVK 88
Query: 190 LIPPR-----GCAFVCMNRRQDAAKALYKLKNTKL--QGKTITLAWAPGKGMKDK 237
+I + G FV Q AAKAL L T++ + L WA G G+ D+
Sbjct: 89 MIRDKFNGSAGYCFVDFTSPQAAAKAL-ALNGTQIPNSNRPFKLNWASGGGLADR 142
>gi|298709098|emb|CBJ31046.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1237
Score = 50.4 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPR---------GCAFVCMNRRQDAA 208
ST L++G+L+ V EE L + F +G V SI ++ PR C F+ R++DA
Sbjct: 237 STNLYLGNLAPTVTEEALQEAFSPFGKVYSIKIMWPRTDEERARKRNCGFLSFWRKEDAV 296
Query: 209 KALYKLKNTKLQGKTITLAWA 229
A + +T +G +++ W
Sbjct: 297 NAKRAMMDTDFEGHRMSIGWG 317
>gi|351723185|ref|NP_001236758.1| uncharacterized protein LOC100499841 [Glycine max]
gi|255627057|gb|ACU13873.1| unknown [Glycine max]
Length = 143
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 6/88 (6%)
Query: 151 NGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMNRR 204
N + M S+ L+IG LS V ++ L D F +GDVV +I RG FV +
Sbjct: 28 NYIRCMSSSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSND 87
Query: 205 QDAAKALYKLKNTKLQGKTITLAWAPGK 232
+ A+ AL + L G++I +++A K
Sbjct: 88 ESASSALSAMDGKDLNGRSIRVSYANDK 115
>gi|20453185|gb|AAM19833.1| At2g43410/T1O24.15 [Arabidopsis thaliana]
gi|27764946|gb|AAO23594.1| At2g43410/T1O24.15 [Arabidopsis thaliana]
Length = 901
Score = 50.4 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
S LW+G L+ E +L++ FG YGD+ I + RG AF+ ++A A L+
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAAKEALQGA 76
Query: 218 KLQGKTITLAWA-PGKGMK 235
L G I + +A P K K
Sbjct: 77 NLNGSQIKIEYARPAKPCK 95
>gi|290562419|gb|ADD38606.1| Pre-mRNA cleavage complex 2 protein Pcf11 [Lepeophtheirus salmonis]
Length = 263
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 12/102 (11%)
Query: 43 VVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRHQFQDKDVFGPRFARNLKATFQHLYQCP 102
+V +E+ I K K +K+PALY++DS+V+ HQ +D+F +N+ +TF ++
Sbjct: 51 IVAVIERHIRKVKTGHKLPALYLMDSIVKN--HQTPYRDLFQ----QNIVSTFASVFITA 104
Query: 103 PED-KSKIIRVLNLWQKNEVFTPDIIHPL---FDMADPNHPI 140
PE +S + R+ N W N++FTP + L DP PI
Sbjct: 105 PEKVRSLMYRLRNTW--NDIFTPTKMFQLDKKVKTMDPAWPI 144
>gi|145331109|ref|NP_001078046.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|145331111|ref|NP_001078047.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|145331113|ref|NP_001078048.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|290463421|sp|Q8LPQ9.2|FPA_ARATH RecName: Full=Flowering time control protein FPA
gi|330255169|gb|AEC10263.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|330255170|gb|AEC10264.1| Flowering time control protein FPA [Arabidopsis thaliana]
gi|330255171|gb|AEC10265.1| Flowering time control protein FPA [Arabidopsis thaliana]
Length = 901
Score = 50.4 bits (119), Expect = 9e-04, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
S LW+G L+ E +L++ FG YGD+ I + RG AF+ ++A A L+
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAAKEALQGA 76
Query: 218 KLQGKTITLAWA-PGKGMK 235
L G I + +A P K K
Sbjct: 77 NLNGSQIKIEYARPAKPCK 95
>gi|373854326|ref|ZP_09597124.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391231688|ref|ZP_10267894.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
gi|372472193|gb|EHP32205.1| RNP-1 like RNA-binding protein [Opitutaceae bacterium TAV5]
gi|391221349|gb|EIP99769.1| RRM domain-containing RNA-binding protein [Opitutaceae bacterium
TAV1]
Length = 122
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 6/80 (7%)
Query: 156 MCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMNRRQDAAK 209
M ++ L++G++S E+EL FG++G+V + + PRG AFV M+ ++A
Sbjct: 1 MSNSKLYVGNMSFKTSEDELRSAFGQFGNVTDVYVAMDKMTGRPRGFAFVTMSTPEEAKI 60
Query: 210 ALYKLKNTKLQGKTITLAWA 229
A KL L G+ +T+ A
Sbjct: 61 AAEKLNGVDLGGRALTVNEA 80
>gi|68478681|ref|XP_716609.1| hypothetical protein CaO19.7368 [Candida albicans SC5314]
gi|46438281|gb|EAK97614.1| hypothetical protein CaO19.7368 [Candida albicans SC5314]
gi|238880985|gb|EEQ44623.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 510
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTK 218
TT+++G+++ Q++EL +G +V P RGCAFV + + AA A+ +L
Sbjct: 412 TTVYLGNIAHFTQQQELIPLLQNFGFIVDFKFHPERGCAFVKYDTHERAALAIIQLAGFN 471
Query: 219 LQGKTITLAWA 229
L G+ + W
Sbjct: 472 LNGRPLKCGWG 482
>gi|321262697|ref|XP_003196067.1| non-translatable mRNA -binding protein [Cryptococcus gattii WM276]
gi|317462542|gb|ADV24280.1| Non-translatable mRNA -binding protein, putative [Cryptococcus
gattii WM276]
Length = 434
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G+L + +L F YG +V I + RG AFV ++ Q+AA A+ L+N
Sbjct: 256 NTTVYVGNLIPYTTQADLIPLFQGYGYIVEIRMQADRGFAFVKLDTHQNAALAITHLQNQ 315
Query: 218 KLQGKTITLAWAPGKG 233
+ G+ I +W KG
Sbjct: 316 LVHGRPIKCSWGKDKG 331
>gi|15227567|ref|NP_180518.1| zinc finger CCCH domain-containing protein 25 [Arabidopsis
thaliana]
gi|75339110|sp|Q9ZW36.1|C3H25_ARATH RecName: Full=Zinc finger CCCH domain-containing protein 25;
Short=AtC3H25
gi|16226863|gb|AAL16284.1|AF428354_1 At2g29580/F16P2.4 [Arabidopsis thaliana]
gi|3980378|gb|AAC95181.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|27363236|gb|AAO11537.1| At2g29580/F16P2.4 [Arabidopsis thaliana]
gi|330253181|gb|AEC08275.1| zinc finger CCCH domain-containing protein 25 [Arabidopsis
thaliana]
Length = 483
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 145 AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRR 204
E+ E+ TL++G L+ V E+++ D F +G++ SI ++ + CAFV R
Sbjct: 214 GEMGTLESPEDQSIRTLYVGGLNSRVLEQDIRDQFYAHGEIESIRILAEKACAFVTYTTR 273
Query: 205 QDAAKALYKLKNT-KLQGKTITLAWA 229
+ A KA +L N + G+ + L W
Sbjct: 274 EGAEKAAEELSNRLVVNGQRLKLTWG 299
>gi|340729596|ref|XP_003403084.1| PREDICTED: protein sex-lethal-like [Bombus terrestris]
Length = 356
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMN 202
AR E + T L++ +L + + E ++ D F +YG++V N++ PRG AFV +
Sbjct: 161 ARPSGEEIKETNLYVTNLPRNITESQIDDIFSKYGNIVQKNILKDKLTGLPRGVAFVRFD 220
Query: 203 RRQDAAKALYKLKNTKLQGKTITLA 227
+R++A +A+ +L T +G + L+
Sbjct: 221 KREEAQEAIARLHGTIPEGGSEPLS 245
>gi|154279514|ref|XP_001540570.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150412513|gb|EDN07900.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 422
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 310 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 369
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 370 PIGNSRVRLSWG 381
>gi|443897423|dbj|GAC74764.1| hsp27-ere-tata-binding protein/Scaffold attachment factor
[Pseudozyma antarctica T-34]
Length = 285
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMNR 203
RN +N L + LSK E +L + FG+YG + ++ PRG AFV +
Sbjct: 65 RNTGDNNPGNNLHVSGLSKTTTERDLEEAFGKYGAIQRAQVMYDPHTREPRGFAFVTYEK 124
Query: 204 RQDAAKALYKLKNTKLQGKTITL 226
+DA A+ + + QG+ IT+
Sbjct: 125 AEDAEAAITAMNGSDFQGRKITV 147
>gi|440636370|gb|ELR06289.1| hypothetical protein, variant [Geomyces destructans 20631-21]
gi|440636371|gb|ELR06290.1| hypothetical protein GMDG_07882 [Geomyces destructans 20631-21]
Length = 411
Score = 50.4 bits (119), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 3/100 (3%)
Query: 130 LFDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSIN 189
++ M P PI A Q N + +TT+++G LS V E+EL F +G++ +
Sbjct: 275 MYSMGAP--PIGYYGAP-QPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVK 331
Query: 190 LIPPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+ P +GC FV +R A A+ +++ + + L+W
Sbjct: 332 IPPGKGCGFVQFVQRHAAEMAINQMQGYPIGNSRVRLSWG 371
>gi|145360944|ref|NP_181869.2| Flowering time control protein FPA [Arabidopsis thaliana]
gi|330255168|gb|AEC10262.1| Flowering time control protein FPA [Arabidopsis thaliana]
Length = 858
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
S LW+G L+ E +L++ FG YGD+ I + RG AF+ ++A A L+
Sbjct: 17 SNNLWVGSLTPETTESDLTELFGRYGDIDRITVYSSRGFAFIYYRHVEEAVAAKEALQGA 76
Query: 218 KLQGKTITLAWA-PGKGMK 235
L G I + +A P K K
Sbjct: 77 NLNGSQIKIEYARPAKPCK 95
>gi|240280986|gb|EER44489.1| mRNA binding post-transcriptional regulator [Ajellomyces capsulatus
H143]
gi|325092520|gb|EGC45830.1| mRNA binding post-transcriptional regulator [Ajellomyces capsulatus
H88]
Length = 399
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 286 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 345
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 346 PIGNSRVRLSWG 357
Score = 38.5 bits (88), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 11/108 (10%)
Query: 139 PIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPR---- 194
P E A A+ E TTLW+G L + E + + + + G+ V++ +I +
Sbjct: 47 PASGEPASGSAQQAGE--AKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGS 104
Query: 195 --GCAFVCMNRRQDAAKALYKLKNTKL--QGKTITLAWAPGKGMKDKD 238
G FV AAKAL L T + +T L WA G G+ D+
Sbjct: 105 NAGYCFVDFTTPAAAAKAL-TLSGTPIPNTSRTFKLNWASGGGLADRS 151
>gi|295661580|ref|XP_002791345.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226280907|gb|EEH36473.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 400
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 287 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 346
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 347 PIGNSRVRLSWG 358
Score = 40.8 bits (94), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 139 PIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPR---- 194
P E A A+ G + TTLW+G L + E + + + + G+ V++ +I +
Sbjct: 47 PASGEAASGSAQQGGD--AKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGS 104
Query: 195 --GCAFVCMNRRQDAAKALYKLKNTKL--QGKTITLAWAPGKGMKDKD 238
G FV + AAKAL L T + +T L WA G G+ D+
Sbjct: 105 NAGYCFVDFSSPAAAAKAL-TLSGTPIPNTSRTFKLNWASGGGLADRS 151
>gi|367019444|ref|XP_003659007.1| hypothetical protein MYCTH_2087998 [Myceliophthora thermophila ATCC
42464]
gi|347006274|gb|AEO53762.1| hypothetical protein MYCTH_2087998 [Myceliophthora thermophila ATCC
42464]
Length = 396
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 43/83 (51%)
Query: 147 IQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQD 206
+Q N + +TT+++G LS V E+EL F +G++ + + P +GC FV R
Sbjct: 257 MQPMNQFTDPNNTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHA 316
Query: 207 AAKALYKLKNTKLQGKTITLAWA 229
A A+ +++ + + L+W
Sbjct: 317 AEMAINQMQGYPIGNSRVRLSWG 339
>gi|195445733|ref|XP_002070461.1| GK11018 [Drosophila willistoni]
gi|194166546|gb|EDW81447.1| GK11018 [Drosophila willistoni]
Length = 419
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 1/83 (1%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT- 217
TTL++G+L + + E E+ D F ++G++ SI L+P + CAFV +R A A + N
Sbjct: 232 TTLYVGNLPEEITEPEIRDQFYQFGEIRSIALVPRQQCAFVQYTKRSAAELAAERTFNKL 291
Query: 218 KLQGKTITLAWAPGKGMKDKDWK 240
+ + +++ WA + ++ K
Sbjct: 292 VIHSRKVSIKWAHSQAKQNTAAK 314
>gi|336271949|ref|XP_003350732.1| hypothetical protein SMAC_02402 [Sordaria macrospora k-hell]
gi|380094894|emb|CCC07396.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 636
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/141 (23%), Positives = 67/141 (47%), Gaps = 15/141 (10%)
Query: 3 VIKTFNQELSSLYDTKPP-ISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVP 61
+ + L + + KPP +S +KI+++T+ + ++ +VQ + K +K+
Sbjct: 11 AVAELEKGLGEMQNLKPPGVSGSKISSLTQLCLNNVQHESQLVQKLYTHYKKTPNTHKLG 70
Query: 62 ALYVIDSLVR----QSRHQFQDKDVFGP---------RFARNLKATFQHLYQCPPED-KS 107
LYV+DS+ R Q++ + Q + P R + + PED K
Sbjct: 71 VLYVVDSVARKWLDQAKARGQPVTLGAPDGTYAAGVHRVTELMPMFMNAIISSAPEDQKE 130
Query: 108 KIIRVLNLWQKNEVFTPDIIH 128
KI +++++W K + F PD+++
Sbjct: 131 KIKKLVDIWDKGQTFPPDMVN 151
>gi|406866319|gb|EKD19359.1| RNA-binding protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 812
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 538 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 597
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 598 PIGNSRVRLSWG 609
>gi|410079368|ref|XP_003957265.1| hypothetical protein KAFR_0D04830 [Kazachstania africana CBS 2517]
gi|372463850|emb|CCF58130.1| hypothetical protein KAFR_0D04830 [Kazachstania africana CBS 2517]
Length = 406
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS LV E+EL + F +G +V + + +GC FV R A A+ K++
Sbjct: 243 NTTVFVGGLSSLVTEDELREYFKPFGTIVYVKIPVGKGCGFVQYIDRVSAENAISKMQGF 302
Query: 218 KLQGKTITLAWA 229
+ I L+W
Sbjct: 303 PIANSRIRLSWG 314
>gi|70949978|ref|XP_744351.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56524270|emb|CAH76885.1| conserved hypothetical protein [Plasmodium chabaudi chabaudi]
Length = 387
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 9/86 (10%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG---------CAFVCMNRRQ 205
N L++G+LS V EE L FG++G V S+ ++ PR FVC ++
Sbjct: 59 NETLANLYLGNLSAEVTEEYLCQRFGKFGKVSSVKIMYPRKEEDKKKGKISGFVCFENKE 118
Query: 206 DAAKALYKLKNTKLQGKTITLAWAPG 231
DA A L ++ GK + + W+
Sbjct: 119 DAENAKDALDGVEMFGKPVIIGWSKA 144
>gi|30679143|ref|NP_567235.3| splicing factor SR1B [Arabidopsis thaliana]
gi|332656770|gb|AEE82170.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 278
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL-IPPR--GCAFVCMNRRQDAAK 209
+ + S T+++G+L ++E E+ D F +YG VV I+L IPPR G AFV +DA
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 210 ALYKLKNTKLQGKTITLAWAPG 231
A+Y G + + A G
Sbjct: 61 AIYGRDGYDFDGHHLRVELAHG 82
>gi|356549711|ref|XP_003543235.1| PREDICTED: uncharacterized protein LOC100816831 [Glycine max]
Length = 934
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/99 (30%), Positives = 49/99 (49%), Gaps = 6/99 (6%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
N S LW+G+LS + EEEL+ F YG + ++ P R AF+ +DA AL L
Sbjct: 39 NPPSRHLWVGNLSHNIVEEELAHHFLRYGPLENVAFQPGRSYAFINFRMDEDAIDALRAL 98
Query: 215 KNTKLQGKTITLAWA----PGKGMKDKDWKDFWEVQDGV 249
+ L G + + +A P D+D+ W+ ++ +
Sbjct: 99 QGFPLAGNPLRIEFAKADKPSAMQHDEDYS--WDERNSI 135
>gi|378727642|gb|EHY54101.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 398
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 287 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 346
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 347 PIGNSRVRLSWG 358
Score = 39.3 bits (90), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 54/135 (40%), Gaps = 21/135 (15%)
Query: 123 TPDIIHPLFDMADPNHPIHRELAEIQA------------RNGVENMCSTTLWIGHLSKLV 170
P I P D A P P + A + G TTLW+G L +
Sbjct: 16 APGQIPPPQDGAAPGQPTDPSAQQQMAFQSPDPNVNAAPQPGSGGEQKTTLWMGELEPWI 75
Query: 171 QEEELSDTFGEYGDVVSINLIPPR------GCAFVCMNRRQDAAKALYKLKNTKLQGKT- 223
E + + + + G+ VS+ +I + G FV + Q AAKAL +L + T
Sbjct: 76 DENFVRNLWFQMGEQVSVKMIRDKFSGSNAGYCFVDFSSPQAAAKAL-QLSGQPMPNSTR 134
Query: 224 -ITLAWAPGKGMKDK 237
L WA G G+ D+
Sbjct: 135 PFKLNWATGGGLADR 149
>gi|70982362|ref|XP_746709.1| mRNA binding post-transcriptional regulator (Csx1) [Aspergillus
fumigatus Af293]
gi|66844333|gb|EAL84671.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus fumigatus Af293]
gi|159123048|gb|EDP48168.1| mRNA binding post-transcriptional regulator (Csx1), putative
[Aspergillus fumigatus A1163]
Length = 418
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 286 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 345
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 346 PIGNSRVRLSWG 357
Score = 37.0 bits (84), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPR------GCAFVCMNRRQDAA 208
N TTLW+G L + E + + + + G+ V++ +I + G FV + AA
Sbjct: 63 NEGKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGYCFVDFSSPAAAA 122
Query: 209 KALYKLKNTKL--QGKTITLAWAPGKGMKDKDWKD 241
KAL L T + + L WA G G+ D+ D
Sbjct: 123 KAL-SLNGTPMPNTNRVFKLNWATGGGLADRSRDD 156
>gi|297790690|ref|XP_002863230.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297309064|gb|EFH39489.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 817
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 39/75 (52%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
N S LW+G+L + E EL+D F +G++ S+ P R AFV +DA A+ L
Sbjct: 10 NPPSRHLWVGNLPHGIPERELADRFLRFGELESLAFQPGRSYAFVNFKHNEDAFAAIESL 69
Query: 215 KNTKLQGKTITLAWA 229
+ L G + + +A
Sbjct: 70 QGFPLSGNPLRIEFA 84
>gi|258576821|ref|XP_002542592.1| hypothetical protein UREG_02108 [Uncinocarpus reesii 1704]
gi|237902858|gb|EEP77259.1| hypothetical protein UREG_02108 [Uncinocarpus reesii 1704]
Length = 399
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 284 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 343
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 344 PIGNSRVRLSWG 355
>gi|225712986|gb|ACO12339.1| Pre-mRNA cleavage complex 2 protein Pcf11 [Lepeophtheirus salmonis]
gi|290462565|gb|ADD24330.1| Pre-mRNA cleavage complex 2 protein Pcf11 [Lepeophtheirus salmonis]
Length = 282
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 57/102 (55%), Gaps = 12/102 (11%)
Query: 43 VVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRHQFQDKDVFGPRFARNLKATFQHLYQCP 102
+V +E+ I K K +K+PALY++DS+V+ HQ +D+F +N+ +TF ++
Sbjct: 51 IVAVIERHIRKVKTGHKLPALYLMDSIVKN--HQTPYRDLFQ----QNIVSTFASVFITA 104
Query: 103 PED-KSKIIRVLNLWQKNEVFTPDIIHPL---FDMADPNHPI 140
PE +S + R+ N W N++FTP + L DP PI
Sbjct: 105 PEKVRSLMYRLRNTW--NDIFTPTKMFQLDKKVKTMDPAWPI 144
>gi|308153271|ref|NP_001184003.1| U2-associated SR140 protein-like [Danio rerio]
Length = 968
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 9/88 (10%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPP---------RGCAFVCMNR 203
V + +T L++G+++ + EE L FG YG + S+ ++ P R C FV
Sbjct: 202 VGDPTTTNLYLGNINPQMNEEMLCQEFGRYGPLASVKIMWPRTDEERARERNCGFVAFMT 261
Query: 204 RQDAAKALYKLKNTKLQGKTITLAWAPG 231
R+DA +AL L + + L W G
Sbjct: 262 RRDAERALKHLNGKMIMNFEMKLGWGKG 289
>gi|119177688|ref|XP_001240593.1| hypothetical protein CIMG_07756 [Coccidioides immitis RS]
Length = 401
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 288 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 347
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 348 PIGNSRVRLSWG 359
>gi|328783793|ref|XP_003250344.1| PREDICTED: sex-lethal homolog [Apis mellifera]
Length = 346
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMN 202
AR E + T L++ +L + + E ++ D F +YG++V N++ PRG AFV +
Sbjct: 161 ARPSGEEIKETNLYVTNLPRNITESQIDDIFSKYGNIVQKNILKDKLTGLPRGVAFVRFD 220
Query: 203 RRQDAAKALYKLKNTKLQGKTITLA 227
+R++A +A+ +L T +G + L+
Sbjct: 221 KREEAQEAIARLHGTIPEGGSEPLS 245
>gi|302696241|ref|XP_003037799.1| hypothetical protein SCHCODRAFT_83732 [Schizophyllum commune H4-8]
gi|300111496|gb|EFJ02897.1| hypothetical protein SCHCODRAFT_83732 [Schizophyllum commune H4-8]
Length = 759
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS L+ E+ L F +GD+ + + + C FV R+ DA A+ K++
Sbjct: 545 NTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAENAIEKMQGF 604
Query: 218 KLQGKTITLAWA 229
+ G I L+W
Sbjct: 605 PIGGSRIRLSWG 616
>gi|303315831|ref|XP_003067920.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240107596|gb|EER25775.1| RNA recognition motif containing protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320032017|gb|EFW13973.1| mRNA binding post-transcriptional regulator [Coccidioides posadasii
str. Silveira]
gi|392867443|gb|EAS29326.2| mRNA binding post-transcriptional regulator [Coccidioides immitis
RS]
Length = 400
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 288 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 347
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 348 PIGNSRVRLSWG 359
>gi|405119959|gb|AFR94730.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Cryptococcus neoformans var. grubii H99]
Length = 434
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 43/76 (56%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G+L + +L F YG +V I + RG AFV ++ Q+AA A+ L+N
Sbjct: 256 NTTVYVGNLIPYTTQADLIPLFQGYGYIVEIRMQADRGFAFVKLDTHQNAALAITHLQNQ 315
Query: 218 KLQGKTITLAWAPGKG 233
+ G+ I +W KG
Sbjct: 316 LVHGRPIKCSWGKDKG 331
>gi|357111822|ref|XP_003557709.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
[Brachypodium distachyon]
Length = 361
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+T L++G L ++V +E+L F YG++ + +I + C FV R A +A+ L +
Sbjct: 233 NTRLFVGGLDRIVTDEDLKKAFSPYGELTEVKVIAGKKCGFVTYLNRASAEEAMRILNGS 292
Query: 218 KLQGKTITLAWAPGKGMKDKDWKDFW 243
L TI ++W K K ++ W
Sbjct: 293 LLGDNTIRISWGRSLYHKQKHDQNQW 318
>gi|353234382|emb|CCA66408.1| hypothetical protein PIIN_00094 [Piriformospora indica DSM 11827]
Length = 699
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/104 (25%), Positives = 49/104 (47%), Gaps = 18/104 (17%)
Query: 144 LAEIQARNGVENMC---STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG----- 195
LA ++ + G + ++ L++ HL V E+ L + FG+ G++ S+ ++ PRG
Sbjct: 165 LAAMEIQGGSRDRGDPETSNLFVAHLPDDVTEDRLGEYFGQCGEITSVKIMWPRGETVGD 224
Query: 196 ----------CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
FV RR+DA AL++L G + + W+
Sbjct: 225 MSRRSKTTGLSGFVSFKRRKDAEMALHRLDGVTWGGSALRVGWS 268
>gi|390601667|gb|EIN11061.1| RNA-binding domain-containing protein [Punctularia strigosozonata
HHB-11173 SS5]
Length = 877
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS L+ E+ L F +GD+ + + + C FV R+ DA +A+ K++
Sbjct: 536 NTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPVGKHCGFVQFVRKADAERAIEKMQGF 595
Query: 218 KLQGKTITLAWA 229
+ G I L+W
Sbjct: 596 PIGGSRIRLSWG 607
>gi|321474916|gb|EFX85880.1| hypothetical protein DAPPUDRAFT_20224 [Daphnia pulex]
Length = 346
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 152 GVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKAL 211
G + + T++ G+L++ EE L FG YG + I + +G AF+ ++ A +A+
Sbjct: 184 GQSSSTNCTVYCGNLAQGSTEEALQKIFGPYGQIQEIRVFKDKGYAFIRFASKESATQAI 243
Query: 212 YKLKNTKLQGKTITLAWA--PGK 232
+ NT L G+ + +W PG+
Sbjct: 244 VSVHNTDLNGQNVKCSWGKEPGE 266
>gi|321464386|gb|EFX75394.1| sex-lethal protein variant 1 [Daphnia pulex]
Length = 263
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 57/106 (53%), Gaps = 9/106 (8%)
Query: 149 ARNGVENMCSTTLWIGHL-SKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCM 201
AR E+ T L++ +L S+ V E+EL++ F +G++V +NL+ PRG AFV
Sbjct: 103 ARPPGEDRKETNLYVTNLPSRDVTEDELTNIFSAHGNIVQMNLLKDKITGMPRGVAFVRF 162
Query: 202 NRRQDAAKALYKLKNTKLQGKT--ITLAWAPGKGMKDKDWKDFWEV 245
++R++A A+ L T G+T I++ A G + + WE
Sbjct: 163 DKREEALAAIEHLNGTIPHGRTNPISVKIAEEHGKQKAAYFAGWEA 208
>gi|449302980|gb|EMC98988.1| hypothetical protein BAUCODRAFT_386817 [Baudoinia compniacensis
UAMH 10762]
Length = 431
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV R A A+ +++
Sbjct: 308 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGY 367
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 368 PIGNSRVRLSWG 379
>gi|351725255|ref|NP_001236574.1| uncharacterized protein LOC100527220 [Glycine max]
gi|255631812|gb|ACU16273.1| unknown [Glycine max]
Length = 138
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 151 NGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMNRR 204
N + M S+ L+IG LS V ++ L D F +GDVV +I RG FV +
Sbjct: 28 NYIRCMSSSKLFIGGLSYGVDDQSLKDAFSGFGDVVDAKVITDRDSGRSRGFGFVNFSND 87
Query: 205 QDAAKALYKLKNTKLQGKTITLAWA 229
+ A+ AL + L G++I +++A
Sbjct: 88 ESASSALSAMDGKDLDGRSIRVSYA 112
>gi|293337265|ref|NP_001168324.1| uncharacterized protein LOC100382091 [Zea mays]
gi|223947441|gb|ACN27804.1| unknown [Zea mays]
gi|223947469|gb|ACN27818.1| unknown [Zea mays]
gi|413933766|gb|AFW68317.1| hypothetical protein ZEAMMB73_975236, partial [Zea mays]
Length = 406
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V +E L TF YG+++ + + + C FV + R A +A+ L +
Sbjct: 270 NTTVFVGGLDPSVTDELLKQTFSPYGELLYVKIPVGKRCGFVQYSNRASAEEAIRVLNGS 329
Query: 218 KLQGKTITLAWA 229
+L G++I L+W
Sbjct: 330 QLGGQSIRLSWG 341
>gi|326513006|dbj|BAK03410.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326525779|dbj|BAJ88936.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 436
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V E+ L F YG+VV + + + C FV R A +AL L+ T
Sbjct: 288 NTTIFVGGLDPNVTEDALKQVFAPYGEVVHVKIPVGKRCGFVQYANRPSAEQALQLLQGT 347
Query: 218 KLQGKTITLAWA 229
+ G+ + L+W
Sbjct: 348 LVGGQNVRLSWG 359
>gi|384487960|gb|EIE80140.1| hypothetical protein RO3G_04845 [Rhizopus delemar RA 99-880]
Length = 292
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 9/81 (11%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPP---------RGCAFVCMNRRQDAA 208
ST L++G++ V E L FG++G + S+ ++ P R FVC R+DAA
Sbjct: 199 STNLYVGNIHPTVTEMGLCHEFGKFGPIASVKIMWPRTLEEKEKGRNNGFVCFMNREDAA 258
Query: 209 KALYKLKNTKLQGKTITLAWA 229
+A+ L +L+G + + W
Sbjct: 259 EAIKGLNGIELEGFKLRVGWG 279
>gi|297603666|ref|NP_001054414.2| Os05g0105900 [Oryza sativa Japonica Group]
gi|52353606|gb|AAU44172.1| unknown protein [Oryza sativa Japonica Group]
gi|215686601|dbj|BAG88854.1| unnamed protein product [Oryza sativa Japonica Group]
gi|255675935|dbj|BAF16328.2| Os05g0105900 [Oryza sativa Japonica Group]
Length = 380
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMNRRQDAAKAL 211
ST L + HLS+ V E+ L + F YG+VV++ L PRG +V R DA KAL
Sbjct: 65 STVLHVDHLSRNVNEDHLKEIFENYGEVVNVELSMDRVVNLPRGYGYVEFKNRADAEKAL 124
Query: 212 YKLKNTKLQGKTITLAWA 229
L ++ G + + +A
Sbjct: 125 LYLDGGQIDGNVVKVRFA 142
>gi|66802807|ref|XP_635247.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|60463542|gb|EAL61727.1| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 489
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 43/71 (60%), Gaps = 7/71 (9%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMNRRQDAAKAL 211
ST L++G + K EEE+ + F ++ S++LI P+GCAFV + R++A +A+
Sbjct: 2 STKLFVGQIPKSFNEEEIKNLFTNIANIESVSLIKNKTTNEPQGCAFVSVPSREEADRAI 61
Query: 212 YKLKNT-KLQG 221
+L N+ K QG
Sbjct: 62 EQLHNSKKFQG 72
>gi|173421|gb|AAA35320.1| poly(A)-binding protein, partial [Schizosaccharomyces pombe]
Length = 628
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI-----PPRGCAFVCMNRRQDAAKALYK 213
T ++I +L + E+E SD FG++G++ S++L+ PRG FV + A KA+ +
Sbjct: 247 TNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDE 306
Query: 214 LKNTKLQGKTITLAWAPGKGMKDKDWKDFWE 244
L + + +GK + + A K ++++ + +E
Sbjct: 307 LNDKEYKGKKLYVGRAQKKHEREEELRKAYE 337
>gi|367053249|ref|XP_003657003.1| hypothetical protein THITE_2132116 [Thielavia terrestris NRRL 8126]
gi|347004268|gb|AEO70667.1| hypothetical protein THITE_2132116 [Thielavia terrestris NRRL 8126]
Length = 396
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV R A A+ +++
Sbjct: 268 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGY 327
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 328 PIGNSRVRLSWG 339
>gi|296412343|ref|XP_002835884.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629680|emb|CAZ80041.1| unnamed protein product [Tuber melanosporum]
Length = 412
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 234 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 293
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 294 PIGNSRVRLSWG 305
Score = 37.7 bits (86), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 8/86 (9%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPR-----GCAFVCMNRRQDAAKALYK 213
TTLW+G L + E + + + + G+ V++ +I + G FV + AAKAL
Sbjct: 44 TTLWMGELEPWIDEAFVRNVWYQLGEGVNVKMIRDKFSGNAGYCFVDFSSPAAAAKAL-T 102
Query: 214 LKNTKLQGKT--ITLAWAPGKGMKDK 237
L T + G + L WA G G+ D+
Sbjct: 103 LNATPIPGSSRPFKLNWASGGGLADR 128
>gi|342875796|gb|EGU77504.1| hypothetical protein FOXB_11986 [Fusarium oxysporum Fo5176]
Length = 405
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV R A A+ +++
Sbjct: 272 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGY 331
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 332 PIGNSRVRLSWG 343
>gi|358401132|gb|EHK50447.1| hypothetical protein TRIATDRAFT_297212 [Trichoderma atroviride IMI
206040]
Length = 409
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV R A A+ +++
Sbjct: 266 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGY 325
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 326 PIGNSRVRLSWG 337
>gi|221128187|ref|XP_002162583.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Hydra
magnipapillata]
Length = 470
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/127 (25%), Positives = 61/127 (48%), Gaps = 17/127 (13%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN-T 217
TTL++G L + ++E++L + F +YG++ S+ + + C F+C RQ A A + N
Sbjct: 232 TTLYVGGLDERIKEDDLRNFFYQYGEIRSVVVASNKSCGFICYTSRQAAEMAAERSFNKV 291
Query: 218 KLQGKTITLAWAPG----------KGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLE 267
++GK + + W KG + K++ + D + IP + D +E
Sbjct: 292 IIKGKRLKVLWGRSQEQRSGGKDEKGDRLKEYPPVPGLPDALPPIPTE------DAPIME 345
Query: 268 DGGVFDE 274
+FDE
Sbjct: 346 PPNLFDE 352
>gi|42522915|ref|NP_968295.1| RNA-binding protein [Bdellovibrio bacteriovorus HD100]
gi|426403373|ref|YP_007022344.1| RNA-binding protein [Bdellovibrio bacteriovorus str. Tiberius]
gi|39574111|emb|CAE79288.1| putative RNA-binding protein [Bdellovibrio bacteriovorus HD100]
gi|425860041|gb|AFY01077.1| putative RNA-binding protein [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 116
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPR------GCAFVCMNRRQDAAKALYKL 214
+++G+LS + ++ L+DTF E+G+V S ++ R G AFV M+ +AA A+ KL
Sbjct: 5 IYVGNLSYSLDDQSLADTFAEFGNVESARIVIDRETGRSKGFAFVEMSTDDEAATAIAKL 64
Query: 215 KNTKLQGKTITLAWA 229
+L G+ + ++ A
Sbjct: 65 NGVELMGRAMNVSEA 79
>gi|414588971|tpg|DAA39542.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 648
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 15/117 (12%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVS------INLIPPRGCAFVCMNRRQDAAKAL 211
+T+L++G L + VQ+ +L D F + G VVS IN G A+V N + DAA+AL
Sbjct: 34 ATSLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARAL 93
Query: 212 YKLKNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLED 268
L T + GK I + ++ +D + G I L K ID L D
Sbjct: 94 ELLNFTPINGKPIRIMYS---------NRDPSSRKSGTGNIFIKNLDKSIDNKALYD 141
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP-----PRGCAFVCMNRRQDA 207
E +T L++ +L + + +E+L + F EYG++ S ++ RG FV +DA
Sbjct: 311 AEKFQNTNLYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDA 370
Query: 208 AKALYKLKNTKLQGKTITLAWA 229
+AL ++ + K + +A A
Sbjct: 371 NRALTEMNGKMVGSKPLYVALA 392
>gi|414588970|tpg|DAA39541.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 654
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 15/117 (12%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVS------INLIPPRGCAFVCMNRRQDAAKAL 211
+T+L++G L + VQ+ +L D F + G VVS IN G A+V N + DAA+AL
Sbjct: 34 ATSLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARAL 93
Query: 212 YKLKNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLED 268
L T + GK I + ++ +D + G I L K ID L D
Sbjct: 94 ELLNFTPINGKPIRIMYS---------NRDPSSRKSGTGNIFIKNLDKSIDNKALYD 141
Score = 42.0 bits (97), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 42/82 (51%), Gaps = 5/82 (6%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP-----PRGCAFVCMNRRQDA 207
E +T L++ +L + + +E+L + F EYG++ S ++ RG FV +DA
Sbjct: 311 AEKFQNTNLYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDA 370
Query: 208 AKALYKLKNTKLQGKTITLAWA 229
+AL ++ + K + +A A
Sbjct: 371 NRALTEMNGKMVGSKPLYVALA 392
>gi|383859290|ref|XP_003705128.1| PREDICTED: sex-lethal homolog [Megachile rotundata]
Length = 386
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 6/85 (7%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMN 202
AR E + T L++ +L + + E ++ D F +YG++V N++ PRG AFV +
Sbjct: 189 ARPSGEEIKETNLYVTNLPRNITESQIDDIFSKYGNIVQKNILKDKITGLPRGVAFVRFD 248
Query: 203 RRQDAAKALYKLKNTKLQGKTITLA 227
+R++A +A+ +L T +G + L+
Sbjct: 249 KREEAQEAIARLHGTIPEGGSEPLS 273
>gi|340521165|gb|EGR51400.1| RNA-binding protein [Trichoderma reesei QM6a]
Length = 441
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV R A A+ +++
Sbjct: 302 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGY 361
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 362 PIGNSRVRLSWG 373
>gi|225680559|gb|EEH18843.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb03]
Length = 400
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 287 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 346
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 347 PIGNSRVRLSWG 358
Score = 40.4 bits (93), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 139 PIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPR---- 194
P E A A+ G + TTLW+G L + E + + + + G+ V++ +I +
Sbjct: 47 PASGEAASGSAQQGGD--AKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGS 104
Query: 195 --GCAFVCMNRRQDAAKALYKLKNTKL--QGKTITLAWAPGKGMKDKD 238
G FV + AAKAL L T + +T L WA G G+ D+
Sbjct: 105 NAGYCFVDFSSPAAAAKAL-TLSGTPIPNTSRTFKLNWASGGGLADRS 151
>gi|395544458|ref|XP_003774127.1| PREDICTED: RNA-binding protein 4 [Sarcophilus harrisii]
Length = 364
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNLELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
+ QGK T L APG G
Sbjct: 135 EFQGKRMHVQLSTSRLRTAPGMG 157
>gi|326524666|dbj|BAK04269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 408
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV R A A+ +++
Sbjct: 279 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGY 338
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 339 PIGNSRVRLSWG 350
>gi|429854847|gb|ELA29832.1| mRNA binding post-transcriptional regulator, partial
[Colletotrichum gloeosporioides Nara gc5]
Length = 366
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV R A A+ +++
Sbjct: 288 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVQIPPGKGCGFVQFVHRHAAEMAINQMQGY 347
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 348 PIGNSRVRLSWG 359
>gi|322694638|gb|EFY86462.1| mRNA binding post-transcriptional regulator [Metarhizium acridum
CQMa 102]
Length = 384
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV R A A+ +++
Sbjct: 255 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGY 314
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 315 PIGNSRVRLSWG 326
>gi|115460682|ref|NP_001053941.1| Os04g0625800 [Oryza sativa Japonica Group]
gi|113565512|dbj|BAF15855.1| Os04g0625800 [Oryza sativa Japonica Group]
gi|215767966|dbj|BAH00195.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 425
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 140 IHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFV 199
+ + Q + +TT+++G L V E+ L F YG+VV + + + C FV
Sbjct: 265 VQERVPNAQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFV 324
Query: 200 CMNRRQDAAKALYKLKNTKLQGKTITLAWAPGKGMKDK 237
R A +AL L+ T + G+ + L+W G+ + +K
Sbjct: 325 QYVNRPSAEQALAVLQGTLIGGQNVRLSW--GRSLSNK 360
>gi|39545835|emb|CAE04743.3| OSJNBb0060E08.6 [Oryza sativa Japonica Group]
gi|116309791|emb|CAH66831.1| OSIGBa0148A10.8 [Oryza sativa Indica Group]
Length = 414
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 140 IHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFV 199
+ + Q + +TT+++G L V E+ L F YG+VV + + + C FV
Sbjct: 254 VQERVPNAQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFV 313
Query: 200 CMNRRQDAAKALYKLKNTKLQGKTITLAWAPGKGMKDK 237
R A +AL L+ T + G+ + L+W G+ + +K
Sbjct: 314 QYVNRPSAEQALAVLQGTLIGGQNVRLSW--GRSLSNK 349
>gi|385808716|ref|YP_005845112.1| RRM domain RNA-binding protein [Ignavibacterium album JCM 16511]
gi|383800764|gb|AFH47844.1| RRM domain RNA-binding protein [Ignavibacterium album JCM 16511]
Length = 108
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMNRRQDAAKALYK 213
+++G+LS VQEE+L + F E+G V + +I +G FV M DA KA+ +
Sbjct: 2 NIFVGNLSNEVQEEDLMNLFSEFGQVKEVKIIRDMFSRQSKGFGFVEMPGLADAQKAINE 61
Query: 214 LKNTKLQGKTITLAWA 229
L +++GK IT+ A
Sbjct: 62 LNTVEVKGKKITVNEA 77
>gi|390949102|ref|YP_006412861.1| RRM domain-containing RNA-binding protein [Thiocystis violascens
DSM 198]
gi|390425671|gb|AFL72736.1| RRM domain-containing RNA-binding protein [Thiocystis violascens
DSM 198]
Length = 90
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMNRRQDAAKALYKL 214
+++G+L+ V +EEL D FG YG++ S+NLI +G FV M +A A+ L
Sbjct: 3 IYVGNLAYGVTQEELRDAFGAYGEISSVNLITDKFTGDSKGFGFVEMPNNAEADAAIKGL 62
Query: 215 KNTKLQGKTITLAWAPGKGMK 235
T L+G+ + + A +G +
Sbjct: 63 NETPLKGRNLKVNQAKPRGER 83
>gi|358340385|dbj|GAA34086.2| pre-mRNA-splicing factor RBM22/SLT11 [Clonorchis sinensis]
Length = 534
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 154 ENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYK 213
E+ TTL+IG + V E +L + F ++G++ S+NL P + CAF+ RQ A KA +
Sbjct: 243 EDRTITTLYIGSIPDEVTERDLRNHFYQFGEIRSVNLHPRQHCAFIQFTTRQSAEKAAER 302
Query: 214 -LKNTKLQGKTITLAWA 229
+ L G +T+ W
Sbjct: 303 SYERLILGGHRLTVNWG 319
>gi|356538950|ref|XP_003537963.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 2 [Glycine max]
Length = 392
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/125 (24%), Positives = 54/125 (43%), Gaps = 6/125 (4%)
Query: 144 LAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNR 203
++ + N V N TT+ IG+L V EEEL TF ++GD+V + + +G +V
Sbjct: 202 VSAVAPENDVNN---TTVCIGNLDLNVTEEELKQTFMQFGDIVLVKIYAGKGYGYVQFGT 258
Query: 204 RQDAAKALYKLKNTKLQGKTITLAWAP---GKGMKDKDWKDFWEVQDGVSYIPYDRLSKE 260
R A A+ +++ + + I ++W + M W ++ G Y
Sbjct: 259 RVSAEDAIQRMQGKVIGQQVIQISWGSSMTARQMDPSQWSAYYGYGQGYEAYAYGATQDP 318
Query: 261 IDYDY 265
Y Y
Sbjct: 319 SIYTY 323
Score = 40.4 bits (93), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMNRRQDAAKALYK 213
TLWIG L V E LS F G+VVSI +I P G FV A L
Sbjct: 11 TLWIGDLQYWVDESYLSQCFAHNGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFLRT 70
Query: 214 LKNTKLQG--KTITLAWA 229
++ G +T L WA
Sbjct: 71 YNGAQMPGTEQTFRLNWA 88
>gi|5823574|emb|CAB53756.1| putative protein [Arabidopsis thaliana]
gi|7267965|emb|CAB78306.1| putative protein [Arabidopsis thaliana]
Length = 109
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
N S LW+G+L + E EL+D F +G++ S+ P R AFV N +DA A+ L
Sbjct: 11 NPPSRHLWVGNLPHGILERELADRFLRFGELESLAFQPGRSYAFVNFNHDEDAFAAIESL 70
Query: 215 KNTKLQGKTITLAWA 229
+ L G + + +A
Sbjct: 71 QGFPLSGNPLRIEFA 85
>gi|45361253|ref|NP_989204.1| RNA binding motif protein 4B [Xenopus (Silurana) tropicalis]
gi|38648979|gb|AAH63354.1| RNA binding motif protein 4B [Xenopus (Silurana) tropicalis]
gi|89272511|emb|CAJ82586.1| RNA binding motif protein 4 [ [Xenopus (Silurana) tropicalis]
Length = 338
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 56/116 (48%), Gaps = 18/116 (15%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L + +LS EEL F EYG V+ +++ + AFV M R +A A+ L NT
Sbjct: 77 STKLHVSNLSTSCTSEELRAKFEEYGAVLECDIV--KDYAFVHMERSAEALDAIKNLDNT 134
Query: 218 KLQGK-------TITLAWAPGKGMKDKDWK----DFWEVQDGVSYIPYDRLSKEID 262
+ +GK T L PG G + + ++ W + P D+++KE++
Sbjct: 135 EFKGKRMHVQLSTSRLRVTPGMGERTRCYRCGKEGHWSKE-----CPLDQMTKELE 185
>gi|322705595|gb|EFY97180.1| mRNA binding post-transcriptional regulator [Metarhizium anisopliae
ARSEF 23]
Length = 390
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV R A A+ +++
Sbjct: 255 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGY 314
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 315 PIGNSRVRLSWG 326
>gi|222623094|gb|EEE57226.1| hypothetical protein OsJ_07197 [Oryza sativa Japonica Group]
Length = 459
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 40/80 (50%)
Query: 150 RNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK 209
R + + T+++G L E+EL F +YGD+ S+ + + C FV R DA +
Sbjct: 322 RQSDSDSTNRTIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNRPDAEE 381
Query: 210 ALYKLKNTKLQGKTITLAWA 229
AL L + + + + L+W
Sbjct: 382 ALQGLNGSTIGKQAVRLSWG 401
>gi|225434698|ref|XP_002280897.1| PREDICTED: zinc finger CCCH domain-containing protein 49-like
[Vitis vinifera]
Length = 474
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT-K 218
TL++G L V E++L D F +G++ S+ ++ R CAFV R+ A KA +L N
Sbjct: 229 TLYVGGLDARVTEQDLRDHFYAHGEIESVRMVLQRACAFVTYTTREGAEKAAEELSNKLV 288
Query: 219 LQGKTITLAWA 229
++G + L W
Sbjct: 289 IKGLRLKLMWG 299
>gi|222640040|gb|EEE68172.1| hypothetical protein OsJ_26296 [Oryza sativa Japonica Group]
Length = 329
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 39/73 (53%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
+TT+++G L V ++ L F YGDVV + + + C FV R A +AL L+
Sbjct: 182 SNTTIFVGGLDPSVTDDMLKQVFTPYGDVVHVKIPVGKRCGFVQFANRASADEALVLLQG 241
Query: 217 TKLQGKTITLAWA 229
T + G+ + L+W
Sbjct: 242 TLIGGQNVRLSWG 254
>gi|322786770|gb|EFZ13115.1| hypothetical protein SINV_15313 [Solenopsis invicta]
Length = 320
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 151 NGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG---------CAFVCM 201
NG N +T L++G+L+ + E++L + FG+YG + SI ++ PR C FV
Sbjct: 191 NGDPN--TTNLYLGNLNPKITEQQLMEIFGKYGPLASIKIMWPRSDEEKARQRNCGFVAF 248
Query: 202 NRRQDAAKALYKLKNTKLQGKTITLAWA 229
R+D +AL L + + L W
Sbjct: 249 MSRKDGERALKNLNGRDIMQYEMKLGWG 276
>gi|302893889|ref|XP_003045825.1| hypothetical protein NECHADRAFT_66100 [Nectria haematococca mpVI
77-13-4]
gi|256726752|gb|EEU40112.1| hypothetical protein NECHADRAFT_66100 [Nectria haematococca mpVI
77-13-4]
Length = 408
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV R A A+ +++
Sbjct: 276 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGY 335
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 336 PIGNSRVRLSWG 347
>gi|261199113|ref|XP_002625958.1| mRNA binding post-transcriptional regulator [Ajellomyces
dermatitidis SLH14081]
gi|239595110|gb|EEQ77691.1| mRNA binding post-transcriptional regulator [Ajellomyces
dermatitidis SLH14081]
gi|327353834|gb|EGE82691.1| hypothetical protein BDDG_05635 [Ajellomyces dermatitidis ATCC
18188]
Length = 399
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 286 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 345
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 346 PIGNSRVRLSWG 357
Score = 38.5 bits (88), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 48/104 (46%), Gaps = 11/104 (10%)
Query: 143 ELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPR------GC 196
E A A+ G E TTLW+G L + E + + + + G+ V++ +I + G
Sbjct: 51 EPAPSSAQQGGE--AKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGSNAGY 108
Query: 197 AFVCMNRRQDAAKALYKLKNTKL--QGKTITLAWAPGKGMKDKD 238
FV AAKAL L T + +T L WA G G+ D+
Sbjct: 109 CFVDFTTPAAAAKAL-TLSGTPIPNTSRTFKLNWASGGGLADRS 151
>gi|226292803|gb|EEH48223.1| mRNA binding post-transcriptional regulator (Csx1)
[Paracoccidioides brasiliensis Pb18]
Length = 400
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 287 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 346
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 347 PIGNSRVRLSWG 358
Score = 40.4 bits (93), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 50/108 (46%), Gaps = 11/108 (10%)
Query: 139 PIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPR---- 194
P E A A+ G + TTLW+G L + E + + + + G+ V++ +I +
Sbjct: 47 PASGEAASGSAQQGGD--AKTTLWMGELEPWIDENFIRNLWFQMGEQVNVKMIRDKFSGS 104
Query: 195 --GCAFVCMNRRQDAAKALYKLKNTKL--QGKTITLAWAPGKGMKDKD 238
G FV + AAKAL L T + +T L WA G G+ D+
Sbjct: 105 NAGYCFVDFSSPAAAAKAL-TLSGTPIPNTSRTFKLNWASGGGLADRS 151
>gi|198419371|ref|XP_002126733.1| PREDICTED: similar to tetratricopeptide repeat domain 31 [Ciona
intestinalis]
Length = 661
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+ TLWIG +S V E+ LS+ F +YG+VV I ++ + CAFV + +A KA+
Sbjct: 493 TNTLWIGDMSPAVTEQMLSEYFSKYGNVVRIVMMLTKRCAFVTFDTEGEARKAILASDCI 552
Query: 218 KLQGKTITLAWAPGKGMKDK 237
++ + L + P K +K
Sbjct: 553 QINNTMLILRF-PDKAYNNK 571
>gi|125549823|gb|EAY95645.1| hypothetical protein OsI_17510 [Oryza sativa Indica Group]
Length = 426
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 48/98 (48%), Gaps = 2/98 (2%)
Query: 140 IHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFV 199
+ + Q + +TT+++G L V E+ L F YG+VV + + + C FV
Sbjct: 266 VQERVPNAQGAQSENDPNNTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFV 325
Query: 200 CMNRRQDAAKALYKLKNTKLQGKTITLAWAPGKGMKDK 237
R A +AL L+ T + G+ + L+W G+ + +K
Sbjct: 326 QYVNRPSAEQALAVLQGTLIGGQNVRLSW--GRSLSNK 361
>gi|358380439|gb|EHK18117.1| hypothetical protein TRIVIDRAFT_117191, partial [Trichoderma virens
Gv29-8]
Length = 417
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV R A A+ +++
Sbjct: 282 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGY 341
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 342 PIGNSRVRLSWG 353
>gi|297814065|ref|XP_002874916.1| hypothetical protein ARALYDRAFT_327556 [Arabidopsis lyrata subsp.
lyrata]
gi|297320753|gb|EFH51175.1| hypothetical protein ARALYDRAFT_327556 [Arabidopsis lyrata subsp.
lyrata]
Length = 281
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL-IPPR--GCAFVCMNRRQDAAK 209
+ + S T+++G+L ++E E+ D F +YG VV I+L IPPR G AFV +DA
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 210 ALYKLKNTKLQGKTITLAWAPG 231
A+Y G + + A G
Sbjct: 61 AIYGRDGYDFDGHRLRVELAHG 82
>gi|46122719|ref|XP_385913.1| hypothetical protein FG05737.1 [Gibberella zeae PH-1]
Length = 409
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV R A A+ +++
Sbjct: 277 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGY 336
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 337 PIGNSRVRLSWG 348
>gi|310798962|gb|EFQ33855.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 419
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV R A A+ +++
Sbjct: 293 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGY 352
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 353 PIGNSRVRLSWG 364
>gi|222629596|gb|EEE61728.1| hypothetical protein OsJ_16246 [Oryza sativa Japonica Group]
Length = 607
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 2/80 (2%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G L V E+ L F YG+VV + + + C FV R A +AL L+ T
Sbjct: 232 NTTIFVGGLDPNVTEDVLKQVFAPYGEVVHVKIPVGKRCGFVQYVNRPSAEQALAVLQGT 291
Query: 218 KLQGKTITLAWAPGKGMKDK 237
+ G+ + L+W G+ + +K
Sbjct: 292 LIGGQNVRLSW--GRSLSNK 309
>gi|48310520|gb|AAT41832.1| At4g12630 [Arabidopsis thaliana]
Length = 117
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 40/75 (53%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
N S LW+G+L + E EL+D F +G++ S+ P R AFV N +DA A+ L
Sbjct: 19 NPPSRHLWVGNLPHGILERELADRFLRFGELESLAFQPGRSYAFVNFNHDEDAFAAIESL 78
Query: 215 KNTKLQGKTITLAWA 229
+ L G + + +A
Sbjct: 79 QGFPLSGNPLRIEFA 93
>gi|19114289|ref|NP_593377.1| mRNA export shuttling protein [Schizosaccharomyces pombe 972h-]
gi|3123239|sp|P31209.2|PABP_SCHPO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|2104439|emb|CAB08762.1| mRNA export shuttling protein [Schizosaccharomyces pombe]
Length = 653
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI-----PPRGCAFVCMNRRQDAAKALYK 213
T ++I +L + E+E SD FG++G++ S++L+ PRG FV + A KA+ +
Sbjct: 261 TNVYIKNLDTEITEQEFSDLFGQFGEITSLSLVKDQNDKPRGFGFVNYANHECAQKAVDE 320
Query: 214 LKNTKLQGKTITLAWAPGKGMKDKDWKDFWE 244
L + + +GK + + A K ++++ + +E
Sbjct: 321 LNDKEYKGKKLYVGRAQKKHEREEELRKRYE 351
>gi|40253807|dbj|BAD05744.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group]
gi|40253847|dbj|BAD05783.1| putative RNA Binding Protein 45 [Oryza sativa Japonica Group]
Length = 427
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 44/90 (48%)
Query: 140 IHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFV 199
+ ++ Q + +TT+++G L V ++ L F YGDVV + + + C FV
Sbjct: 270 VQEKVPSAQGVQSDSDPSNTTIFVGGLDPSVTDDMLKQVFTPYGDVVHVKIPVGKRCGFV 329
Query: 200 CMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
R A +AL L+ T + G+ + L+W
Sbjct: 330 QFANRASADEALVLLQGTLIGGQNVRLSWG 359
>gi|408392147|gb|EKJ71507.1| hypothetical protein FPSE_08320 [Fusarium pseudograminearum CS3096]
Length = 442
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV R A A+ +++
Sbjct: 278 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGY 337
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 338 PIGNSRVRLSWG 349
>gi|403170092|ref|XP_003329487.2| hypothetical protein PGTG_11237 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168561|gb|EFP85068.2| hypothetical protein PGTG_11237 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 372
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 9/78 (11%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVSINLI---------PPRGCAFVCMNRRQDAAKAL 211
L++G+LS V E L F ++G + ++ + PRG AF+ MNRR +A KA+
Sbjct: 21 LYVGNLSPAVDEFALVALFSKFGKISKLDFLFHKSGVLRGKPRGYAFIEMNRRDEALKAM 80
Query: 212 YKLKNTKLQGKTITLAWA 229
+L N ++GK I + A
Sbjct: 81 VELNNKAVRGKRILVTQA 98
>gi|297834824|ref|XP_002885294.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
gi|297331134|gb|EFH61553.1| RNA-binding protein 47B [Arabidopsis lyrata subsp. lyrata]
Length = 435
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
+ T+++G + V +E+L F ++G+VVS+ + +GC FV R+ A A+ L
Sbjct: 319 TNATIFVGGIDADVTDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFAERKSAEDAIETLNG 378
Query: 217 TKLQGKTITLAWA 229
T + T+ L+W
Sbjct: 379 TVIGKNTVRLSWG 391
>gi|389747119|gb|EIM88298.1| hypothetical protein STEHIDRAFT_95374 [Stereum hirsutum FP-91666
SS1]
Length = 932
Score = 50.1 bits (118), Expect = 0.001, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 41/72 (56%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS L+ EE L F +G++ + + + C FV R+ DA +A+ K++
Sbjct: 564 NTTVFVGGLSPLISEETLRTFFAPFGEIHYVKVPVGKHCGFVQFVRKADAERAIEKMQGF 623
Query: 218 KLQGKTITLAWA 229
+ G I L+W
Sbjct: 624 PIGGSRIRLSWG 635
>gi|374107618|gb|AEY96526.1| FADR307Wp [Ashbya gossypii FDAG1]
Length = 565
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 111 RVLNLWQKNEVFTPDIIHP-LFDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKL 169
V L Q+++ P P L ADPN+ TT++IG LS L
Sbjct: 253 NVQTLLQQSQFIYPVQQQPALSQFADPNN--------------------TTVFIGGLSSL 292
Query: 170 VQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
V E+EL F +G +V + + +GC FV R A A+ K++ + + L+W
Sbjct: 293 VTEDELRAYFQPFGQIVYVKIPVGKGCGFVQYVDRSSAENAIAKMQGFPIGNSRVRLSWG 352
>gi|353239139|emb|CCA71062.1| hypothetical protein PIIN_04997 [Piriformospora indica DSM 11827]
Length = 393
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+T +++G +S V +EL + F G + ++N +GCAF+ R+ DAA A+ +L
Sbjct: 165 NTKVFVGGISPRVLLQELVNRFAAMGVITNVNF--GKGCAFISFARKHDAALAIERLDGM 222
Query: 218 KLQGKTITLAWA 229
+ GK++ + W+
Sbjct: 223 IMDGKSLRVTWS 234
>gi|302307679|ref|NP_984403.2| ADR307Wp [Ashbya gossypii ATCC 10895]
gi|299789115|gb|AAS52227.2| ADR307Wp [Ashbya gossypii ATCC 10895]
Length = 566
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 52/120 (43%), Gaps = 21/120 (17%)
Query: 111 RVLNLWQKNEVFTPDIIHP-LFDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKL 169
V L Q+++ P P L ADPN+ TT++IG LS L
Sbjct: 253 NVQTLLQQSQFIYPVQQQPALSQFADPNN--------------------TTVFIGGLSSL 292
Query: 170 VQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
V E+EL F +G +V + + +GC FV R A A+ K++ + + L+W
Sbjct: 293 VTEDELRAYFQPFGQIVYVKIPVGKGCGFVQYVDRSSAENAIAKMQGFPIGNSRVRLSWG 352
>gi|294909807|ref|XP_002777856.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
gi|239885818|gb|EER09651.1| splicing factor, putative [Perkinsus marinus ATCC 50983]
Length = 360
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTK 218
TL++G++S E ++ D FG YG V+ + P + FV + +DA A + + +
Sbjct: 5 NTLYVGNISSRTTERDIKDEFGRYGRVIRCYIPPGKNICFVEYDDERDAEDAYRGMASAR 64
Query: 219 LQGKTITLAWA 229
+ G T+ L WA
Sbjct: 65 VDGNTLNLQWA 75
>gi|145538427|ref|XP_001454919.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422696|emb|CAK87522.1| unnamed protein product [Paramecium tetraurelia]
Length = 656
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/87 (28%), Positives = 42/87 (48%), Gaps = 3/87 (3%)
Query: 155 NMC---STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKAL 211
N C + T+++ ++ V E +L++ F YG V + L P R + M + A A
Sbjct: 379 NQCERSNITIFVKNIQFRVNETDLNELFSRYGQVNKVYLAPNRSIGIITMQDDKQANNAF 438
Query: 212 YKLKNTKLQGKTITLAWAPGKGMKDKD 238
L+N K +G + L WAP M + +
Sbjct: 439 SNLQNYKFKGSILYLEWAPTTLMGESN 465
>gi|68531995|ref|XP_723677.1| peptidyl-prolyl cis-trans isomerase E [Plasmodium yoelii yoelii
17XNL]
gi|23478052|gb|EAA15242.1| peptidyl-prolyl cis-trans isomerase E-related [Plasmodium yoelii
yoelii]
Length = 127
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 46/84 (54%), Gaps = 6/84 (7%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSI----NLIPP--RGCAFVCMNRRQDAAKA 210
+ L++G + + + ++ L D F +GD+ +I NL+ RG AF+ + DA A
Sbjct: 5 TTEILYVGGIHETIDKKCLYDIFSSFGDIRNIEIPMNLVTNKNRGFAFIEYVEKNDAKHA 64
Query: 211 LYKLKNTKLQGKTITLAWAPGKGM 234
LY + N +L GK IT+ ++ K M
Sbjct: 65 LYNMNNFELNGKIITVNYSRTKKM 88
>gi|449513289|ref|XP_004164285.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
RBP47B'-like [Cucumis sativus]
Length = 427
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 41/72 (56%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G+L + EEEL TF ++G++ + + +GC FV R A +A+ K++
Sbjct: 234 NTTIFVGNLDPNITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGK 293
Query: 218 KLQGKTITLAWA 229
+ + + +W
Sbjct: 294 IIGQQVVRTSWG 305
Score = 41.2 bits (95), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMNRRQDAAKALYK 213
TLWIG L V E L+ F G+V+SI +I P G FV A + L
Sbjct: 21 TLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQT 80
Query: 214 LKNTKLQG--KTITLAWA 229
T++ G +T L WA
Sbjct: 81 YNGTQMPGTEQTFRLNWA 98
>gi|1778374|gb|AAB71417.1| glycine-rich RNA-binding protein PsGRBP [Pisum sativum]
gi|206586422|gb|ACI15745.1| glycine-rich RNA-binding protein [Pisum sativum]
Length = 146
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 6/85 (7%)
Query: 151 NGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMNRR 204
N + +M S+ L+IG LS V ++ L D F YG+VV +I RG FV
Sbjct: 28 NYLRHMSSSKLFIGGLSYGVDDQSLKDAFASYGEVVEARVITDRDTGRSRGFGFVNFTSD 87
Query: 205 QDAAKALYKLKNTKLQGKTITLAWA 229
+ A AL + L G+ I +++A
Sbjct: 88 ESATSALSAMDGQDLNGRNIRVSYA 112
>gi|346977902|gb|EGY21354.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
dahliae VdLs.17]
Length = 418
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV R A A+ +++
Sbjct: 283 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGY 342
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 343 PIGNSRVRLSWG 354
>gi|427781181|gb|JAA56042.1| Putative heat shock protein [Rhipicephalus pulchellus]
Length = 360
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKL 219
+LW+G++ V E+ L+D F YGDV SI ++ R CAF+ + KA+ L+ L
Sbjct: 203 SLWVGNIQPEVTEKMLTDLFRRYGDVHSIRILHDRHCAFINYGNKLSPGKAMEALQGHVL 262
Query: 220 QGKTITLAWAPGKGMKDKDWKD 241
G I + + +++ KD
Sbjct: 263 CGTAILIRFPDNNFLENGSKKD 284
>gi|380478379|emb|CCF43635.1| RNA recognition domain-containing protein, partial [Colletotrichum
higginsianum]
Length = 419
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV R A A+ +++
Sbjct: 293 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGY 352
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 353 PIGNSRVRLSWG 364
>gi|357144721|ref|XP_003573391.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Brachypodium distachyon]
Length = 435
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 39/73 (53%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
+TT+++G L V E+ L F YG+VV + + + C FV R + +AL L+
Sbjct: 291 SNTTIFVGGLDPNVTEDMLKQVFAPYGEVVHVKIPVGKRCGFVQYASRSSSEEALLMLQG 350
Query: 217 TKLQGKTITLAWA 229
T + G+ + L+W
Sbjct: 351 TVIGGQNVRLSWG 363
>gi|356544510|ref|XP_003540693.1| PREDICTED: flowering time control protein FPA-like [Glycine max]
Length = 909
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 1/79 (1%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
S LW+G+L+ V + +L + F +YG + S+ R AFV R +DA A L+ T
Sbjct: 18 SNNLWVGNLAADVTDADLMELFAKYGALDSVTSYSARSYAFVFFKRVEDAKAAKNALQGT 77
Query: 218 KLQGKTITLAWA-PGKGMK 235
L+G ++ + +A P K K
Sbjct: 78 SLRGSSLKIEFARPAKACK 96
>gi|198419175|ref|XP_002129060.1| PREDICTED: similar to U2-associated SR140 protein [Ciona
intestinalis]
Length = 922
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/107 (28%), Positives = 56/107 (52%), Gaps = 13/107 (12%)
Query: 132 DMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI 191
++ADP+ + +L NG + +T L++G+++ + E++L + FG+YG + S+ ++
Sbjct: 178 NIADPS--VLDDLVASSHENG--DPMTTNLFLGNVNPKLDEQQLCELFGKYGPLASVKVM 233
Query: 192 PP---------RGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
P R CAFV R+DA +AL L+ + + L W
Sbjct: 234 WPRTEDERARERNCAFVAFMTRKDADRALRHLQGRDICDYEMKLGWG 280
>gi|154296254|ref|XP_001548559.1| hypothetical protein BC1G_12954 [Botryotinia fuckeliana B05.10]
Length = 409
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 302 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 361
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 362 PIGNSRVRLSWG 373
>gi|449469386|ref|XP_004152401.1| PREDICTED: polyadenylate-binding protein RBP47B'-like [Cucumis
sativus]
Length = 422
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 41/72 (56%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G+L + EEEL TF ++G++ + + +GC FV R A +A+ K++
Sbjct: 229 NTTIFVGNLDPNITEEELKQTFLQFGEIAYVKIPAGKGCGFVQFGTRASAEEAIQKMQGK 288
Query: 218 KLQGKTITLAWA 229
+ + + +W
Sbjct: 289 IIGQQVVRTSWG 300
Score = 40.8 bits (94), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 8/78 (10%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMNRRQDAAKALYK 213
TLWIG L V E L+ F G+V+SI +I P G FV A + L
Sbjct: 21 TLWIGDLQYWVDESYLNSCFAHTGEVISIKIIRNKITGQPEGYGFVEFVSHAAAERILQT 80
Query: 214 LKNTKLQG--KTITLAWA 229
T++ G +T L WA
Sbjct: 81 YNGTQMPGTEQTFRLNWA 98
>gi|403214377|emb|CCK68878.1| hypothetical protein KNAG_0B04440 [Kazachstania naganishii CBS
8797]
Length = 397
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT++IG LS LV+EEEL F +G++V + + +GC FV R A A+ +++
Sbjct: 293 NTTVFIGGLSPLVKEEELRQYFQPFGEIVYVKIPVGKGCGFVQYIDRISAETAISQMQGF 352
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 353 PISNSRVRLSWG 364
>gi|395645925|ref|ZP_10433785.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM 4140]
gi|395442665|gb|EJG07422.1| RNP-1 like RNA-binding protein [Methanofollis liminatans DSM 4140]
Length = 86
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 43/71 (60%)
Query: 156 MCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLK 215
M ++ L++G+L+ V E++L + F +YGDV S+ +I +G FV M ++A KA L
Sbjct: 1 METSRLYVGNLTYSVTEKQLEELFSQYGDVKSVKIIGDKGFGFVEMGSPEEAEKAKEALN 60
Query: 216 NTKLQGKTITL 226
T G+T+ +
Sbjct: 61 ETVFVGRTLRI 71
>gi|443896159|dbj|GAC73503.1| RNA-binding protein [Pseudozyma antarctica T-34]
Length = 1243
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 27/82 (32%), Positives = 37/82 (45%)
Query: 129 PLFDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSI 188
P DM + A+ N + +LWIGHL V +EL F YG + +
Sbjct: 480 PTLDMYASARSPQPKSAQRSGSNSPFLQPTRSLWIGHLRPTVTSQELVQAFSPYGAIETF 539
Query: 189 NLIPPRGCAFVCMNRRQDAAKA 210
L+P +GCAFV DA +A
Sbjct: 540 RLVPEKGCAFVNYVDLADAVRA 561
Score = 40.0 bits (92), Expect = 1.1, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 33/68 (48%), Gaps = 3/68 (4%)
Query: 143 ELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMN 202
EL ++A N + S LWIG + + L F +G + S+ ++ + CAF+
Sbjct: 619 ELGGVEAAN---HEPSRALWIGSIPPTTSSDVLVSVFAPFGSIESVRVLSSKSCAFINFE 675
Query: 203 RRQDAAKA 210
R +DA A
Sbjct: 676 RTEDAMTA 683
>gi|388494768|gb|AFK35450.1| unknown [Medicago truncatula]
Length = 176
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMNRRQD 206
+ +M S L+IG +S E L + F YGDV+ +I RG F+ ++
Sbjct: 34 IRSMSSAKLFIGGVSYSTDETGLREAFSRYGDVLDAKIIMDRDTGRSRGFGFITFATSEE 93
Query: 207 AAKALYKLKNTKLQGKTITLAWA 229
A+ AL + N +L G+T+ + +A
Sbjct: 94 ASSALQAMDNKELDGRTVRVNYA 116
>gi|159164093|pdb|2DGT|A Chain A, Solution Structure Of The Second Rna Binding Domain In
Rna- Binding Protein 30
Length = 92
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 39/65 (60%), Gaps = 2/65 (3%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 10 STKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 67
Query: 218 KLQGK 222
+ QGK
Sbjct: 68 EFQGK 72
>gi|297745955|emb|CBI16011.3| unnamed protein product [Vitis vinifera]
Length = 349
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT-K 218
TL++G L V E++L D F +G++ S+ ++ R CAFV R+ A KA +L N
Sbjct: 229 TLYVGGLDARVTEQDLRDHFYAHGEIESVRMVLQRACAFVTYTTREGAEKAAEELSNKLV 288
Query: 219 LQGKTITLAWA 229
++G + L W
Sbjct: 289 IKGLRLKLMWG 299
>gi|294945440|ref|XP_002784681.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
gi|239897866|gb|EER16477.1| arginine/serine-rich splicing factor, putative [Perkinsus marinus
ATCC 50983]
Length = 463
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 145 AEIQ-ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPR--GCAFVCM 201
AEI AR E C++ +WIG L V+E EL D FG+ G VV + + AF+
Sbjct: 136 AEITPARATTEGGCASRIWIGGLPSDVREAELEDRFGKIGRVVGVKICQSSRDTYAFLQF 195
Query: 202 NRRQDAAKALYKLKNTKLQGKTITLAWA 229
+ AA A+ + TK G TI +A A
Sbjct: 196 DSETAAADAIEDVDQTKFGGFTIKVAHA 223
>gi|221504135|gb|EEE29812.1| RRM / zinc finger (CCCH type) domain-containing protein [Toxoplasma
gondii VEG]
Length = 400
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL-KN 216
+TT+++G L+K V E++L D F +G+++SI + + AF+C R A +A+ +L N
Sbjct: 232 NTTVFVGGLTKGVTEQDLRDAFYAFGELLSIKMYRGQQFAFLCYAERSSAEEAVKQLHSN 291
Query: 217 TKLQGKTITLAWA 229
++G + +AWA
Sbjct: 292 LVIKGVRLRVAWA 304
>gi|330795007|ref|XP_003285567.1| hypothetical protein DICPUDRAFT_149432 [Dictyostelium purpureum]
gi|325084480|gb|EGC37907.1| hypothetical protein DICPUDRAFT_149432 [Dictyostelium purpureum]
Length = 268
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 40/71 (56%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTK 218
+++G L++ +QE L ++F E+G++VSI + P RG AFV + KA+ +
Sbjct: 38 NAIFVGDLTQSIQEPHLQNSFKEFGEIVSIRIFPQRGFAFVNFKDSESVEKAINGMNGGL 97
Query: 219 LQGKTITLAWA 229
++G + + +
Sbjct: 98 IEGIAVKVGHS 108
>gi|26352530|dbj|BAC39895.1| unnamed protein product [Mus musculus]
gi|74183052|dbj|BAE20479.1| unnamed protein product [Mus musculus]
gi|74186507|dbj|BAE34743.1| unnamed protein product [Mus musculus]
Length = 168
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 52/95 (54%), Gaps = 13/95 (13%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L N
Sbjct: 76 ASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDN 133
Query: 217 TKLQGKTITLAW-APGKGMKDK--------DWKDF 242
T+ QG+ +L W A K ++++ WKDF
Sbjct: 134 TEFQGE--SLFWSAQYKAVRNELVEKRKALGWKDF 166
>gi|237840441|ref|XP_002369518.1| RRM / zinc finger (CCCH type) domain-containing protein [Toxoplasma
gondii ME49]
gi|211967182|gb|EEB02378.1| RRM / zinc finger (CCCH type) domain-containing protein [Toxoplasma
gondii ME49]
gi|221483211|gb|EEE21535.1| lysine-specific histone demethylase, putative [Toxoplasma gondii
GT1]
Length = 400
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL-KN 216
+TT+++G L+K V E++L D F +G+++SI + + AF+C R A +A+ +L N
Sbjct: 232 NTTVFVGGLTKGVTEQDLRDAFYAFGELLSIKMYRGQQFAFLCYAERSSAEEAVKQLHSN 291
Query: 217 TKLQGKTITLAWA 229
++G + +AWA
Sbjct: 292 LVIKGVRLRVAWA 304
>gi|302420775|ref|XP_003008218.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
albo-atrum VaMs.102]
gi|261353869|gb|EEY16297.1| RNA-binding post-transcriptional regulator csx1 [Verticillium
albo-atrum VaMs.102]
Length = 430
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV R A A+ +++
Sbjct: 283 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGY 342
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 343 PIGNSRVRLSWG 354
>gi|255726450|ref|XP_002548151.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240134075|gb|EER33630.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 472
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTK 218
TT+++G+++ Q++E+ +G +V P RGCAFV + + AA A+ +L
Sbjct: 376 TTVYLGNIAHFTQQQEIIPLLQNFGFIVDFKFHPERGCAFVKYDTHERAALAIIQLAGFN 435
Query: 219 LQGKTITLAWA 229
L G+ + W
Sbjct: 436 LNGRPLKCGWG 446
>gi|328792621|ref|XP_001121935.2| PREDICTED: hrp65 protein-like [Apis mellifera]
Length = 563
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 43/70 (61%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKLQ 220
L+IG+L+ V EEE+ F +YG++ + + + AF+ M+ R +A KA ++L T +
Sbjct: 152 LYIGNLTNDVTEEEIQQMFQQYGEISELFVNKEKNFAFLRMDYRVNAEKAKHELDGTMRK 211
Query: 221 GKTITLAWAP 230
G+ + + +AP
Sbjct: 212 GRALKVRFAP 221
>gi|327289700|ref|XP_003229562.1| PREDICTED: RNA-binding protein 4B-like [Anolis carolinensis]
Length = 354
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 9/90 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISTGCTNLELRFKFEEYGPVLECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKGMKDKDWK 240
+ QGK T L APG G K ++
Sbjct: 135 EFQGKRMRVQLSTSRLRTAPGMGDKSGCYR 164
>gi|218189774|gb|EEC72201.1| hypothetical protein OsI_05282 [Oryza sativa Indica Group]
Length = 1224
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMNRRQDAAKAL 211
S L I HLS+ V E L + FG +G+VV++ L PRG ++ +R DA KAL
Sbjct: 898 SVVLHIDHLSRNVNEAHLKEIFGNFGEVVNVELSMDRMVNLPRGYGYIEFKKRTDAEKAL 957
Query: 212 YKLKNTKLQGKTITLAW 228
+ ++ G + L +
Sbjct: 958 LYMDGGQIDGNVVKLRF 974
>gi|115446801|ref|NP_001047180.1| Os02g0567900 [Oryza sativa Japonica Group]
gi|113536711|dbj|BAF09094.1| Os02g0567900, partial [Oryza sativa Japonica Group]
Length = 259
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKL 219
T+++G L E+EL F +YGD+ S+ + + C FV R DA +AL L + +
Sbjct: 132 TIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNRPDAEEALQGLNGSTI 191
Query: 220 QGKTITLAWA 229
+ + L+W
Sbjct: 192 GKQAVRLSWG 201
>gi|407917997|gb|EKG11296.1| hypothetical protein MPH_11641 [Macrophomina phaseolina MS6]
Length = 626
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 15/123 (12%)
Query: 156 MCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKA---LY 212
+ S TL++G +S E+EL F +G+V + + P + AFV M R D+ +A +
Sbjct: 474 VLSRTLFVGGVS--ATEQELRQIFSRFGEVQTCIVNPEKHHAFVKMATRTDSVQAKLGME 531
Query: 213 KLKNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKE-----IDYDYLE 267
K KN ++ K W G G ++ D+ G+S IP DRL++ I+ +Y
Sbjct: 532 KEKNPQVLNKARQTRW--GVGFGPRECSDY---STGISVIPIDRLTEADRKWVINSEYGG 586
Query: 268 DGG 270
GG
Sbjct: 587 TGG 589
Score = 47.0 bits (110), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 62/140 (44%), Gaps = 18/140 (12%)
Query: 1 MDVIKTFNQELSSLYDTKPP-ISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYK 59
M I+ N L SL KPP +K+KITAIT I ++Q++ +K
Sbjct: 1 MSAIEELNTLLLSLSALKPPGANKSKITAITNLCIANANQCPLILQTIRDRFNTSPNTHK 60
Query: 60 VPALYVIDSLVRQ--SRHQFQDKDV-------------FGPRFARNLKATFQH-LYQCPP 103
+ LYV+D++VRQ R + +D G A + H L Q P
Sbjct: 61 LGVLYVLDAVVRQWADRARLNKEDAASAGSDVSKAPNSIGVAIATQVLPPMMHDLIQTAP 120
Query: 104 ED-KSKIIRVLNLWQKNEVF 122
ED K +I +++ +W++ F
Sbjct: 121 EDQKDRIGKMIEIWERGNTF 140
>gi|45553910|ref|NP_996326.1| sister-of-Sex-lethal [Drosophila melanogaster]
gi|25012235|gb|AAN71232.1| LD21345p [Drosophila melanogaster]
gi|27819751|gb|AAO24926.1| SD07604p [Drosophila melanogaster]
gi|45446770|gb|AAS65244.1| sister-of-Sex-lethal [Drosophila melanogaster]
gi|220951726|gb|ACL88406.1| CG3056-PB [synthetic construct]
Length = 443
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMN 202
AR G +++ T L++ +LS+ + ++ L F YG +V N++ PRG AFV N
Sbjct: 169 ARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYN 228
Query: 203 RRQDAAKALYKLKNTKLQGKT----ITLAWAPGK 232
+R++A +A+ L NT +G + + LA GK
Sbjct: 229 KREEAQEAIKALNNTVPEGGSQPIWVRLAEEHGK 262
>gi|406602666|emb|CCH45778.1| Nucleolysin TIA-1 isoform [Wickerhamomyces ciferrii]
Length = 485
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT++IG LS +V E+EL F +GD+ + + +GC FV R A A+ K++
Sbjct: 293 NTTVFIGGLSSIVTEDELRLYFQPFGDITYVKIPVGKGCGFVQYVTRSSAELAISKMQGY 352
Query: 218 KLQGKTITLAWA 229
+ I L+W
Sbjct: 353 PIGNSRIRLSWG 364
>gi|400600479|gb|EJP68153.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 410
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV R A A+ +++
Sbjct: 273 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGY 332
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 333 PIGNSRVRLSWG 344
>gi|326501514|dbj|BAK02546.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 423
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMNRRQDAAKAL 211
S L + HLS+ V E L + FG YG+VV++ L PRG ++ +R DA KAL
Sbjct: 104 SVVLHVDHLSRNVNEAHLKEIFGSYGEVVNVELSMDKFVNLPRGYGYIEFKKRTDAEKAL 163
Query: 212 YKLKNTKLQGKTITLAW 228
+ ++ G + L +
Sbjct: 164 LYMDGGQIDGNVVKLKF 180
>gi|255714705|ref|XP_002553634.1| KLTH0E03520p [Lachancea thermotolerans]
gi|238935016|emb|CAR23197.1| KLTH0E03520p [Lachancea thermotolerans CBS 6340]
Length = 516
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT++IG LS LV E+EL F +G +V + + +GC FV R A A+ K++
Sbjct: 272 NTTVFIGGLSSLVSEDELRAYFQPFGSIVYVKIPVGKGCGFVQYVDRISAETAIAKMQGY 331
Query: 218 KLQGKTITLAWA 229
+ I L+W
Sbjct: 332 PIGNSRIRLSWG 343
>gi|383861809|ref|XP_003706377.1| PREDICTED: hrp65 protein-like [Megachile rotundata]
Length = 566
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 43/70 (61%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKLQ 220
L+IG+L+ V EEE+ F +YG++ + + + AF+ M+ R +A KA ++L T +
Sbjct: 152 LYIGNLTNDVTEEEIQQMFQQYGEISELFVNKEKNFAFLRMDYRVNAEKAKHELDGTMRK 211
Query: 221 GKTITLAWAP 230
G+ + + +AP
Sbjct: 212 GRALKVRFAP 221
>gi|410045417|ref|XP_003951989.1| PREDICTED: RNA-binding protein 4B isoform 1 [Pan troglodytes]
gi|426369355|ref|XP_004051658.1| PREDICTED: RNA-binding protein 4B isoform 2 [Gorilla gorilla
gorilla]
gi|441607717|ref|XP_004087894.1| PREDICTED: RNA-binding protein 4B isoform 2 [Nomascus leucogenys]
Length = 143
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 40/68 (58%), Gaps = 2/68 (2%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGKTIT 225
+ QG+ I
Sbjct: 135 EFQGRIIA 142
>gi|46806694|dbj|BAD17764.1| putative nucleic acid binding protein [Oryza sativa Japonica Group]
Length = 396
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKL 219
T+++G L E+EL F +YGD+ S+ + + C FV R DA +AL L + +
Sbjct: 269 TIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNRPDAEEALQGLNGSTI 328
Query: 220 QGKTITLAWA 229
+ + L+W
Sbjct: 329 GKQAVRLSWG 338
>gi|365984507|ref|XP_003669086.1| hypothetical protein NDAI_0C01820 [Naumovozyma dairenensis CBS 421]
gi|343767854|emb|CCD23843.1| hypothetical protein NDAI_0C01820 [Naumovozyma dairenensis CBS 421]
Length = 498
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 64/171 (37%), Gaps = 27/171 (15%)
Query: 66 IDSLVRQSRHQFQDKDVFGPRFARNL-KATFQHLYQCPPEDKSKIIRV------LNLWQK 118
I + S H D + P A + K+ FQ P + I R L
Sbjct: 246 IGTTTGGSAHTNTDNNALAPNIANSGGKSRFQGTTTNSPSSPANIGRGNTSNYRLTSLSS 305
Query: 119 NEVFTPDIIHPLFDMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDT 178
+F PL DPN+ TT+++G LS +V EE+L
Sbjct: 306 QFIFPVQQQPPLNHFTDPNN--------------------TTVFVGGLSSMVTEEQLRHC 345
Query: 179 FGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
F +G ++ + + +GC FV R A A+ +++ + I L+W
Sbjct: 346 FQPFGTIIYVKIPIGKGCGFVQYFDRISAETAILRMQGFPIGNSRIRLSWG 396
>gi|288940038|ref|YP_003442278.1| RNP-1 like RNA-binding protein [Allochromatium vinosum DSM 180]
gi|288895410|gb|ADC61246.1| RNP-1 like RNA-binding protein [Allochromatium vinosum DSM 180]
Length = 91
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 6/81 (7%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMNRRQDAAKALYKL 214
+++G+L+ V ++EL D FG YG++ S+NLI +G FV M +A A+ L
Sbjct: 3 IYVGNLAYSVTQDELRDAFGAYGEISSVNLITDKFTGSSKGFGFVEMPNNSEADAAIKGL 62
Query: 215 KNTKLQGKTITLAWAPGKGMK 235
T L+G+ + + A +G +
Sbjct: 63 NETPLKGRNLKVNQAKPRGER 83
>gi|3789907|gb|AAC67539.1| developmental protein DG1074 [Dictyostelium discoideum]
Length = 259
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
S +++G L+ + QE+ L++ F E+G++ SI L P RG AFV + +A+ +
Sbjct: 85 SNAIFVGDLTPIAQEQTLNNIFKEFGEITSIRLFPSRGFAFVNYKDSESCVRAIAGMNGG 144
Query: 218 KLQGKTITLAWA 229
+ G + + +
Sbjct: 145 LVDGNPVKVGQS 156
>gi|3255957|emb|CAA19655.1| EG:132E8.1 [Drosophila melanogaster]
Length = 485
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMN 202
AR G +++ T L++ +LS+ + ++ L F YG +V N++ PRG AFV N
Sbjct: 169 ARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYN 228
Query: 203 RRQDAAKALYKLKNTKLQGKT----ITLAWAPGK 232
+R++A +A+ L NT +G + + LA GK
Sbjct: 229 KREEAQEAIKALNNTVPEGGSQPIWVRLAEEHGK 262
>gi|393216132|gb|EJD01623.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 937
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 22/72 (30%), Positives = 41/72 (56%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS L+ E+ L F +GD+ + + + C FV R+ DA +A+ +++
Sbjct: 578 NTTVFVGGLSPLISEDTLRTFFAPFGDIHYVKVPAGKHCGFVQFVRKADAERAIERMQGF 637
Query: 218 KLQGKTITLAWA 229
+ G I L+W
Sbjct: 638 PIGGSRIRLSWG 649
>gi|225450797|ref|XP_002283865.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Vitis vinifera]
Length = 288
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL-IPPR--GCAFVCMNRRQDAAK 209
+ + S T+++G+L ++E E+ D F +YG +V I+L IPPR G AFV +DA
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFYKYGPIVDIDLKIPPRPPGYAFVEFEDARDAED 60
Query: 210 ALYKLKNTKLQGKTITLAWAPG 231
A+Y G + + A G
Sbjct: 61 AIYGRDGYNFDGHRLRVELAHG 82
>gi|210075493|ref|XP_501829.2| YALI0C14476p [Yarrowia lipolytica]
gi|199425274|emb|CAG82140.2| YALI0C14476p [Yarrowia lipolytica CLIB122]
Length = 541
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 50/101 (49%), Gaps = 13/101 (12%)
Query: 21 ISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRHQFQDK 80
+ K IT +T A K + +++E+ I KC PEYK+PA+Y++DS+ K
Sbjct: 21 VQKPIITNLTVIAEENRHAAKAITRAIEERISKCAPEYKLPAMYLLDSIC---------K 71
Query: 81 DVFGPR---FARNLKATFQHLY-QCPPEDKSKIIRVLNLWQ 117
+V P F NL TF Y Q P + K+I + W+
Sbjct: 72 NVGAPYTTCFGINLYRTFADTYTQVPESIRRKLIELYGTWK 112
>gi|255577189|ref|XP_002529477.1| RNA recognition motif-containing protein, putative [Ricinus
communis]
gi|223531035|gb|EEF32887.1| RNA recognition motif-containing protein, putative [Ricinus
communis]
Length = 902
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 8/98 (8%)
Query: 140 IHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFV 199
+H+E E +A S LW+G+L+ V + +L D F +YG + S+ R AF+
Sbjct: 10 VHKESDEPEA-------PSNNLWVGNLAPDVTDSDLMDLFAKYGALDSVTTYSSRSYAFL 62
Query: 200 CMNRRQDAAKALYKLKNTKLQGKTITLAWA-PGKGMKD 236
+DAA A L+ T L+G + + +A P K K+
Sbjct: 63 YFKHVEDAAAAKDALQGTLLRGNPVKIEFARPAKPSKN 100
Score = 41.2 bits (95), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
S LW+G +S V +E+L + F ++G + + R AF+ + +DA +A+ +
Sbjct: 98 SKNLWVGGISPAVSKEQLEEEFLKFGKIEEFKFLRDRNTAFIEYVKLEDALEAMRSMNGK 157
Query: 218 KLQGKTI 224
+L G I
Sbjct: 158 RLGGDQI 164
>gi|218191015|gb|EEC73442.1| hypothetical protein OsI_07730 [Oryza sativa Indica Group]
Length = 312
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKL 219
T+++G L E+EL F +YGD+ S+ + + C FV R DA +AL L + +
Sbjct: 185 TIYVGGLDPNATEDELRKAFAKYGDLASVKIPVGKQCGFVQFVNRPDAEEALQGLNGSTI 244
Query: 220 QGKTITLAWA 229
+ + L+W
Sbjct: 245 GKQAVRLSWG 254
>gi|146421272|ref|XP_001486586.1| hypothetical protein PGUG_02257 [Meyerozyma guilliermondii ATCC
6260]
Length = 681
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+ L F ++G + I + P + C FV R+DA +A+ ++
Sbjct: 327 NTTVFVGGLSSDVNEQTLFTLFKQFGIIQQIKIPPGKNCGFVKYTNREDAEEAIASMQGF 386
Query: 218 KLQGKTITLAWA 229
+ G + L+W
Sbjct: 387 IIGGNRVRLSWG 398
>gi|222619908|gb|EEE56040.1| hypothetical protein OsJ_04833 [Oryza sativa Japonica Group]
Length = 1120
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 40/77 (51%), Gaps = 6/77 (7%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMNRRQDAAKAL 211
S L I HLS+ V E L + FG +G+VV++ L PRG ++ +R DA KAL
Sbjct: 795 SVVLHIDHLSRNVNEAHLKEIFGNFGEVVNVELSMDRMVNLPRGYGYIEFKKRTDAEKAL 854
Query: 212 YKLKNTKLQGKTITLAW 228
+ ++ G + L +
Sbjct: 855 LYMDGGQIDGNVVKLRF 871
>gi|294884880|gb|ADF47448.1| TIA1-like protein, partial [Dugesia japonica]
Length = 284
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 5/95 (5%)
Query: 145 AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI-----PPRGCAFV 199
+ + + N ++ + +++G + V E L + F E+G VV ++ RG AFV
Sbjct: 92 SSLPSSNKIDYSNTIQIFVGDIGLDVDEAMLKEGFSEFGPVVDAKVVRYQDGQSRGFAFV 151
Query: 200 CMNRRQDAAKALYKLKNTKLQGKTITLAWAPGKGM 234
++R DA KA+ K+ T +TI WA G+
Sbjct: 152 AFSKRDDAEKAIEKMHKTWFHNRTIKCNWATRNGL 186
>gi|194912401|ref|XP_001982498.1| GG12847 [Drosophila erecta]
gi|190648174|gb|EDV45467.1| GG12847 [Drosophila erecta]
Length = 513
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMN 202
AR G +++ T L++ +LS+ + ++ L F YG +V N++ PRG AFV N
Sbjct: 177 ARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYN 236
Query: 203 RRQDAAKALYKLKNTKLQGKT----ITLAWAPGK 232
+R++A +A+ L NT +G + + LA GK
Sbjct: 237 KREEAQEAIKALNNTVPEGGSQPIWVRLAEEHGK 270
>gi|190346145|gb|EDK38159.2| hypothetical protein PGUG_02257 [Meyerozyma guilliermondii ATCC
6260]
Length = 681
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+ L F ++G + I + P + C FV R+DA +A+ ++
Sbjct: 327 NTTVFVGGLSSDVNEQTLFTLFKQFGIIQQIKIPPGKNCGFVKYTNREDAEEAIASMQGF 386
Query: 218 KLQGKTITLAWA 229
+ G + L+W
Sbjct: 387 IIGGNRVRLSWG 398
>gi|331220241|ref|XP_003322796.1| hypothetical protein PGTG_04333 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309301786|gb|EFP78377.1| hypothetical protein PGTG_04333 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 666
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/105 (29%), Positives = 54/105 (51%), Gaps = 8/105 (7%)
Query: 139 PIHRELAEIQARNGVENM-----CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPP 193
PI LA + + EN STT+++ L + E+ L F +G++ + + P
Sbjct: 125 PIAAPLATMPQTSFQENSPNDDPSSTTVFVAGLPACITEDTLKTFFQNFGEIAYVKIPPH 184
Query: 194 RGCAFVCMNRRQDAAKALYKLKNTKLQGKT-ITLAWAPGKGMKDK 237
+G FV RR+DA +A+ K+ + + K+ I L+W G+ + DK
Sbjct: 185 KGYGFVKYVRREDAKQAIIKMNDFPIHEKSRIRLSW--GRSLGDK 227
>gi|356555656|ref|XP_003546146.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 411
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G+L V ++ L F +YG++V + + + C FV R A +AL L T
Sbjct: 269 NTTIFVGNLDPNVTDDHLRQVFSQYGELVHVKIPAGKRCGFVQFADRSCAEEALRVLNGT 328
Query: 218 KLQGKTITLAWA 229
L G+ + L+W
Sbjct: 329 LLGGQNVRLSWG 340
>gi|326495758|dbj|BAJ85975.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 255
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 152 GVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL-IPPR--GCAFVCMNRRQDAA 208
G N C T+++G+L ++E E+ D F +YG +V I+L IPPR G AFV +DA
Sbjct: 2 GRRNSC--TIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAD 59
Query: 209 KALYKLKNTKLQGKTITLAWAPG 231
A+Y G + + A G
Sbjct: 60 DAIYGRDGYDFDGYRLRVELAHG 82
>gi|432119575|gb|ELK38536.1| U2 snRNP-associated SURP motif-containing protein [Myotis davidii]
Length = 1052
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPR---------GCAFVCMNR 203
V + +T L++G+++ + EE L FG +G + S+ ++ PR C FV
Sbjct: 290 VGDPSTTNLYLGNINPQMNEEMLCQEFGRFGPLASVKIMWPRTDEERARERNCGFVAFMN 349
Query: 204 RQDAAKALYKLKNTKLQGKTITLAWAPGKGM 234
R+DA +AL L + + L W GK M
Sbjct: 350 RRDAERALKNLNGKMIMSFEMKLGW--GKAM 378
>gi|254566455|ref|XP_002490338.1| RNA binding protein that negatively regulates growth rate
[Komagataella pastoris GS115]
gi|238030134|emb|CAY68057.1| RNA binding protein that negatively regulates growth rate
[Komagataella pastoris GS115]
gi|328350732|emb|CCA37132.1| Uncharacterized RNA-binding protein C23E6.01c [Komagataella
pastoris CBS 7435]
Length = 506
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 2/96 (2%)
Query: 136 PNHPIHRELAE--IQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPP 193
P+ P+ + A +RN + ++T+++G L+ V EE L F +G + SI +
Sbjct: 253 PSAPMVPQFASNNSSSRNIYNDPTNSTVFVGGLAAGVSEETLFTLFEPFGSISSIKIPRG 312
Query: 194 RGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+GC FV + R++A A+ + + G + L+W
Sbjct: 313 KGCGFVKFSTREEAENAISGMHGFLIGGSRVRLSWG 348
>gi|380023432|ref|XP_003695527.1| PREDICTED: hrp65 protein-like [Apis florea]
Length = 563
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 43/70 (61%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKLQ 220
L+IG+L+ V EEE+ F +YG++ + + + AF+ M+ R +A KA ++L T +
Sbjct: 152 LYIGNLTNDVTEEEIQQMFQQYGEISELFVNKEKNFAFLRMDYRVNAEKAKHELDGTMRK 211
Query: 221 GKTITLAWAP 230
G+ + + +AP
Sbjct: 212 GRALKVRFAP 221
>gi|356550321|ref|XP_003543536.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 419
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/75 (28%), Positives = 44/75 (58%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
++ +TT+++G+L V EEEL ++G++VS+ + P +G FV R A +A+ K+
Sbjct: 223 DVNNTTIFVGNLDLNVSEEELKQNSLQFGEIVSVKIQPGKGFGFVQFGTRASAEEAIQKM 282
Query: 215 KNTKLQGKTITLAWA 229
+ + + + ++W
Sbjct: 283 QGKMIGQQVVRISWG 297
Score = 42.4 bits (98), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 42/94 (44%), Gaps = 10/94 (10%)
Query: 144 LAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCA 197
+A Q + +E + TLWIG L V E LS FG G+V+SI +I P G
Sbjct: 1 MASYQQASTIEEV--RTLWIGDLQYWVDEGYLSHCFGHTGEVISIKIIRNKLTGQPEGYG 58
Query: 198 FVCMNRRQDAAKALYKLKNTKLQG--KTITLAWA 229
FV A + L T++ +T L WA
Sbjct: 59 FVEFVSHAAAERVLQTYNGTQMPATDQTFRLNWA 92
>gi|111226955|ref|XP_645138.2| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
gi|90971285|gb|EAL71206.2| RNA-binding region RNP-1 domain-containing protein [Dictyostelium
discoideum AX4]
Length = 469
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
S +++G L+ + QE+ L++ F E+G++ SI L P RG AFV + +A+ +
Sbjct: 246 SNAIFVGDLTPIAQEQTLNNIFKEFGEITSIRLFPSRGFAFVNYKDSESCVRAIAGMNGG 305
Query: 218 KLQGKTITLAWA 229
+ G + + +
Sbjct: 306 LVDGNPVKVGQS 317
>gi|430812963|emb|CCJ29641.1| unnamed protein product [Pneumocystis jirovecii]
Length = 853
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 23/82 (28%), Positives = 43/82 (52%)
Query: 148 QARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDA 207
Q N + +TT+++G LS V E+EL F +G++ + + P +GC FV +R A
Sbjct: 265 QPMNQFTDPNNTTVFVGGLSSFVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAA 324
Query: 208 AKALYKLKNTKLQGKTITLAWA 229
A+ +++ + + L+W
Sbjct: 325 EMAISQMQGYPIGNSRVRLSWG 346
>gi|414588969|tpg|DAA39540.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 281
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 55/117 (47%), Gaps = 15/117 (12%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVS------INLIPPRGCAFVCMNRRQDAAKAL 211
+T+L++G L + VQ+ +L D F + G VVS IN G A+V N + DAA+AL
Sbjct: 34 ATSLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARAL 93
Query: 212 YKLKNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQDGVSYIPYDRLSKEIDYDYLED 268
L T + GK I + ++ +D + G I L K ID L D
Sbjct: 94 ELLNFTPINGKPIRIMYSN---------RDPSSRKSGTGNIFIKNLDKSIDNKALYD 141
>gi|356548971|ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 409
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G+L V ++ L F +YG++V + + + C FV R A +AL L T
Sbjct: 268 NTTIFVGNLDPNVTDDHLRQVFSQYGELVHVKIPAGKRCGFVQFADRSCAEEALRVLNGT 327
Query: 218 KLQGKTITLAWA 229
L G+ + L+W
Sbjct: 328 LLGGQNVRLSWG 339
>gi|302418128|ref|XP_003006895.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
gi|261354497|gb|EEY16925.1| conserved hypothetical protein [Verticillium albo-atrum VaMs.102]
Length = 160
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 11 LSSLYDTKPP-ISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSL 69
L ++ KPP +S ++I++IT + +++ ++Q + K ++K+ LYV+DS+
Sbjct: 12 LQAMSHLKPPGVSGSRISSITALCVASVQSESVLIQKIYTHFKKTAGDHKLGVLYVVDSV 71
Query: 70 VRQ--SRHQFQDKDVFGP-----------RFARNLKATFQHLYQCPPED-KSKIIRVLNL 115
R+ R + +DV G R + + Q PE+ K KI ++L++
Sbjct: 72 TRKWLERAKSSGQDVDGSATDGTFAAGVHRVTELMPVLMNDIVQSAPENHKEKISKLLDI 131
Query: 116 WQKNEVFTPDII 127
W+K + F +I
Sbjct: 132 WEKGQTFPQSMI 143
>gi|209489440|gb|ACI49201.1| hypothetical protein Csp3_JD03.010 [Caenorhabditis angaria]
Length = 361
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINL------IPPRGCAFVCMNRRQDAAKAL 211
STTL++G+LS +E+++ + FG GDV + + P G FV R+DA AL
Sbjct: 36 STTLYVGNLSYFTKEDQVYELFGRAGDVRRVIMGLDRFKKTPCGFCFVEYYTREDAELAL 95
Query: 212 YKLKNTKLQGKTITLAWAPG 231
+ NT+L + + W G
Sbjct: 96 QNITNTRLDDRLVRADWDAG 115
>gi|255563618|ref|XP_002522811.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
gi|223538049|gb|EEF39662.1| glycine-rich RNA-binding protein, putative [Ricinus communis]
Length = 134
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 43/85 (50%), Gaps = 6/85 (7%)
Query: 151 NGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMNRR 204
N + M S+ L+IG LS ++ L D F +GDVV+ +I RG FV +
Sbjct: 28 NSIRCMSSSKLFIGGLSYGTNDDSLKDAFSGFGDVVTARVITDRDTGRSRGFGFVDFSSV 87
Query: 205 QDAAKALYKLKNTKLQGKTITLAWA 229
A+ AL + +L G+ I +++A
Sbjct: 88 DSASSALSAMDGQELHGRNIRVSYA 112
>gi|308509216|ref|XP_003116791.1| CRE-EIF-3.G protein [Caenorhabditis remanei]
gi|308241705|gb|EFO85657.1| CRE-EIF-3.G protein [Caenorhabditis remanei]
Length = 260
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 49/103 (47%), Gaps = 10/103 (9%)
Query: 132 DMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI 191
D +P+ R+ RN EN C T +L + + E+EL D FG G V+ I +
Sbjct: 157 DADSSRNPLGRQDGRQIDRNRDENTCRVT----NLPQEMNEDELRDVFGRIGRVIRIFIA 212
Query: 192 P------PRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAW 228
P+G AFV R DAA+A+ +L + ++ + + W
Sbjct: 213 RDKITGLPKGFAFVTFESRDDAARAIAELNDIRMYHMVLKVEW 255
>gi|195469719|ref|XP_002099784.1| GE16683 [Drosophila yakuba]
gi|194187308|gb|EDX00892.1| GE16683 [Drosophila yakuba]
Length = 563
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMN 202
AR G +++ T L++ +LS+ + ++ L F YG +V N++ PRG AFV N
Sbjct: 189 ARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYN 248
Query: 203 RRQDAAKALYKLKNTKLQGKT----ITLAWAPGK 232
+R++A +A+ L NT +G + + LA GK
Sbjct: 249 KREEAQEAIKALNNTVPEGGSQPIWVRLAEEHGK 282
>gi|168037574|ref|XP_001771278.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677367|gb|EDQ63838.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 83
Score = 49.3 bits (116), Expect = 0.002, Method: Composition-based stats.
Identities = 26/74 (35%), Positives = 39/74 (52%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
S LWIG++S+ E + D F ++GDV S+ + R AFV +DA +A L+
Sbjct: 3 SRHLWIGNVSQDASEAAIRDKFSQFGDVDSVTVYSSRNYAFVNFRNLEDAVEAKTHLQGF 62
Query: 218 KLQGKTITLAWAPG 231
L G I + +A G
Sbjct: 63 VLGGMAIRIEYAKG 76
>gi|444322688|ref|XP_004181985.1| hypothetical protein TBLA_0H01790 [Tetrapisispora blattae CBS 6284]
gi|387515031|emb|CCH62466.1| hypothetical protein TBLA_0H01790 [Tetrapisispora blattae CBS 6284]
Length = 674
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT++IG LS LV E EL F +G +V + + +GC FV R A A+ K++
Sbjct: 339 NTTVFIGGLSSLVSEGELRSYFQPFGTIVYVKIPVGKGCGFVQYVDRSAAETAISKMQGF 398
Query: 218 KLQGKTITLAWA 229
+ I L+W
Sbjct: 399 PIGNSRIRLSWG 410
>gi|326532404|dbj|BAK05131.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 356
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKL 214
N ++ L++G L V +E+L F YG++ ++ +I + C FV + R A +AL L
Sbjct: 226 NRNNSRLFVGQLDSCVTDEDLIKAFSPYGEL-TVKIIEGKSCGFVTYSSRASAEEALTIL 284
Query: 215 KNTKLQGKTITLAWAPGKGMKDKDWK 240
++L IT+ WA K W
Sbjct: 285 NGSQLGDNIITVVWARHAPKKQDQWN 310
>gi|41054387|ref|NP_955999.1| RNA-binding protein 4.1 [Danio rerio]
gi|28277979|gb|AAH46057.1| RNA binding motif protein 4.1 [Danio rerio]
Length = 419
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST +G++S +EL F EYG VV +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKPHVGNISSSCTNQELRAKFEEYGPVVECDIV--KDYAFVHMERVEDAMEAISGLDNT 134
Query: 218 KLQGK-------TITLAWAPGKGMKDKDWK 240
QGK T L APG G + ++
Sbjct: 135 AFQGKLMSVKLSTSRLRTAPGMGERTGCYR 164
>gi|224060514|ref|XP_002300227.1| predicted protein [Populus trichocarpa]
gi|222847485|gb|EEE85032.1| predicted protein [Populus trichocarpa]
Length = 644
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 62/142 (43%), Gaps = 17/142 (11%)
Query: 133 MADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSI---- 188
MA P+ + A N N +T+L++G L V + +L D F + G VVS+
Sbjct: 1 MAQVQVPVQPQSVNAGANN--PNFVTTSLYVGDLEASVTDSQLYDLFNQVGQVVSVRVCR 58
Query: 189 NLIPPR--GCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWAPGKGMKDKDWKDFWEVQ 246
+L R G +V + QDAA+AL L T L G I + ++ +D +
Sbjct: 59 DLTSRRSLGYGYVNYSNPQDAARALEMLNFTPLNGSPIRVMYS---------HRDPTIRK 109
Query: 247 DGVSYIPYDRLSKEIDYDYLED 268
G I L K ID+ L D
Sbjct: 110 SGAGNIFIKNLDKAIDHKALHD 131
Score = 40.0 bits (92), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 43/88 (48%), Gaps = 9/88 (10%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI-----PPRGCAFVCMNRRQDA 207
+ M +++ +LS+ EE+L+ TFGE+G + SI ++ + FV +DA
Sbjct: 198 TDKMRFNNVFVKNLSETTTEEDLNKTFGEFGTITSIVVMRDGDGKSKCFGFVNFENAEDA 257
Query: 208 AKALYKLKNTKLQGKTITLAWAPGKGMK 235
AKA+ L K+ K W GK K
Sbjct: 258 AKAVEALNGKKIDDKE----WFVGKAQK 281
>gi|346979055|gb|EGY22507.1| Rpb7-binding protein seb1 [Verticillium dahliae VdLs.17]
Length = 703
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 65/132 (49%), Gaps = 15/132 (11%)
Query: 11 LSSLYDTKPP-ISKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSL 69
L ++ KPP +S ++I++IT + +++ ++Q + K ++K+ LYV+DS+
Sbjct: 12 LQAMSHLKPPGVSGSRISSITALCVGSVQSESVLIQKIYTHFKKTAGDHKLGVLYVVDSV 71
Query: 70 VRQ--SRHQFQDKDVFGP-----------RFARNLKATFQHLYQCPPED-KSKIIRVLNL 115
R+ R + +DV G R + + Q PE+ K KI ++L++
Sbjct: 72 TRKWLERAKSSGQDVDGSATDGTFAAGVHRVTELMPVLMNDIVQSAPENHKEKISKLLDI 131
Query: 116 WQKNEVFTPDII 127
W+K + F +I
Sbjct: 132 WEKGQTFPQSMI 143
>gi|325183868|emb|CCA18326.1| conserved hypothetical protein [Albugo laibachii Nc14]
gi|325183943|emb|CCA18401.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 429
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%)
Query: 147 IQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQD 206
+ N E +TT++IG L E++L FG G+++S+ + P RGC FV +
Sbjct: 192 VGTGNTEEEGANTTVFIGGLDPSTTEDDLRARFGVIGEIMSVKVPPGRGCGFVQYVTKDA 251
Query: 207 AAKALYKLKNTKLQGKTITLAWA 229
A A+ ++ + G + AW
Sbjct: 252 ADVAINQMNGALINGVKVRCAWG 274
>gi|307192892|gb|EFN75920.1| Pre-mRNA-splicing factor RBM22 [Harpegnathos saltator]
Length = 415
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 53/95 (55%), Gaps = 1/95 (1%)
Query: 140 IHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFV 199
+ R A + + E+ TTL+IG+L ++ E++L D F +YG++ S+ ++P + CAF+
Sbjct: 213 LMRRAAAMPKLDPPEDKSITTLYIGNLGDVLTEKQLRDHFYQYGEIRSVTMVPRQQCAFI 272
Query: 200 CMNRRQDAAKALYKLKNTK-LQGKTITLAWAPGKG 233
+R A A + N L G+ +T+ W +G
Sbjct: 273 QYTQRTAAEAAAERTFNKLILGGRRLTIKWGRSQG 307
>gi|449019402|dbj|BAM82804.1| similar to TIA1 cytotoxic granule-associated RNA-binding protein
[Cyanidioschyzon merolae strain 10D]
Length = 516
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 45/82 (54%), Gaps = 6/82 (7%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPR------GCAFVCMNRRQDAAKALYKL 214
L++G+L+ +V E +L F YGD++S +I R G FV + DA AL +L
Sbjct: 335 LYVGNLAPMVTESDLIAAFSPYGDLLSCRIIRDRQRGHSLGYGFVRFTSKADARVALNQL 394
Query: 215 KNTKLQGKTITLAWAPGKGMKD 236
+ T + G+ I++ +A G +D
Sbjct: 395 QGTCIMGQEISIGYARGTVQRD 416
>gi|50288915|ref|XP_446887.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526196|emb|CAG59820.1| unnamed protein product [Candida glabrata]
Length = 555
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS LV E+EL F +G ++ + + +GC FV R A A+ K++
Sbjct: 326 NTTVFVGGLSPLVTEDELRSYFEPFGTIIYVKIPAGKGCGFVQYVERSSAETAITKMQGF 385
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 386 PIANSRVRLSWG 397
>gi|346325712|gb|EGX95309.1| mRNA binding post-transcriptional regulator [Cordyceps militaris
CM01]
Length = 474
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV R A A+ +++
Sbjct: 337 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVHRHAAEMAINQMQGY 396
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 397 PIGNSRVRLSWG 408
>gi|427779509|gb|JAA55206.1| Putative heat shock protein [Rhipicephalus pulchellus]
Length = 468
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKL 219
+LW+G++ V E+ L+D F YGDV SI ++ R CAF+ + KA+ L+ L
Sbjct: 315 SLWVGNIQPEVTEKMLTDLFRRYGDVHSIRILHDRHCAFINYGNKLSPGKAMEALQGHVL 374
Query: 220 QGKTITLAWAPGKGMKDKDWKD 241
G I + + +++ KD
Sbjct: 375 CGTAILIRFPDNNFLENGSKKD 396
>gi|290997888|ref|XP_002681513.1| predicted protein [Naegleria gruberi]
gi|284095137|gb|EFC48769.1| predicted protein [Naegleria gruberi]
Length = 292
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G+LS E+ L + F YG + S+ + C F+ R + A +A+ ++
Sbjct: 214 NTTVYVGNLSPNTDEKILREFFQGYGPITSVKIPTNSNCGFINFTRTEHAERAIIEMNGI 273
Query: 218 KLQGKTITLAWA 229
++QG + ++W
Sbjct: 274 EIQGNRVRVSWG 285
>gi|156102458|ref|XP_001616922.1| RNA binding protein [Plasmodium vivax Sal-1]
gi|148805796|gb|EDL47195.1| RNA binding protein, putative [Plasmodium vivax]
Length = 661
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG---------CAFVCMNRRQDAAK 209
L++G+LS V EE L FG++G V S+ ++ PR FVC R DA
Sbjct: 166 ANLYLGNLSAEVTEEYLCQRFGKFGKVNSVKIMYPRTDEDKKKARISGFVCFENRDDAEN 225
Query: 210 ALYKLKNTKLQGKTITLAWAPG 231
A L ++ G + + W+
Sbjct: 226 ARDALDGVEMFGNIVKVGWSKA 247
>gi|3193304|gb|AAC19288.1| T14P8.21 [Arabidopsis thaliana]
gi|7269003|emb|CAB80736.1| AT4g02430 [Arabidopsis thaliana]
Length = 294
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 3/82 (3%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL-IPPR--GCAFVCMNRRQDAAK 209
+ + S T+++G+L ++E E+ D F +YG VV I+L IPPR G AFV +DA
Sbjct: 1 MSSRSSRTIYVGNLPGDIREREVEDLFSKYGPVVQIDLKIPPRPPGYAFVEFEDARDADD 60
Query: 210 ALYKLKNTKLQGKTITLAWAPG 231
A+Y G + + A G
Sbjct: 61 AIYGRDGYDFDGHHLRVELAHG 82
>gi|45595611|gb|AAH67187.1| Rbm4.2 protein [Danio rerio]
Length = 384
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L + ++S +EL F EYG VV +++ + AFV M R DA +A+ L+NT
Sbjct: 77 STKLHVSNISSGCTNQELRAKFEEYGPVVECDIV--KDYAFVHMERMDDAMEAISGLENT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
QGK T L APG G
Sbjct: 135 TFQGKLIKVQLSTSRLRTAPGMG 157
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKLQ 220
++IG+LS ++L F E+G V +++ + FV M+ +++A A+ KL + +L+
Sbjct: 4 IFIGNLSPTSTADDLRSLFSEFGIVKECDVL--KNYGFVHMDSKKEAEAAIRKLHHYELK 61
Query: 221 GKTITLAWAPGK 232
G+ I + + GK
Sbjct: 62 GQAINVELSKGK 73
>gi|41054431|ref|NP_955971.1| RNA binding motif protein 4 like [Danio rerio]
gi|27881945|gb|AAH44503.1| RNA binding motif protein 4.2 [Danio rerio]
gi|157423277|gb|AAI53458.1| Rbm4.2 protein [Danio rerio]
gi|182890716|gb|AAI65179.1| Rbm4.2 protein [Danio rerio]
Length = 385
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L + ++S +EL F EYG VV +++ + AFV M R DA +A+ L+NT
Sbjct: 77 STKLHVSNISSGCTNQELRAKFEEYGPVVECDIV--KDYAFVHMERMDDAMEAISGLENT 134
Query: 218 KLQGK-------TITLAWAPGKG 233
QGK T L APG G
Sbjct: 135 TFQGKLIKVQLSTSRLRTAPGMG 157
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKLQ 220
++IG+LS ++L F E+G V +++ + FV M+ +++A A+ KL + +L+
Sbjct: 4 IFIGNLSPTSTADDLRSLFSEFGIVKECDVL--KNYGFVHMDSKKEAEAAIRKLHHYELK 61
Query: 221 GKTITLAWAPGK 232
G+ I + + GK
Sbjct: 62 GQAINVELSKGK 73
>gi|2443473|gb|AAB71386.1| ASF/SF2 homolog [Arabidopsis thaliana]
Length = 272
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL-IPPR--GCAFVCMNRRQDAAK 209
+ + S T+++G+L ++E E+ D F +YG VV I+L +PPR G AFV + +DA
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 210 ALYKLKNTKLQGKTITLAWAPGKGMKDKD 238
A++ G + + A G G + D
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHG-GRRSSD 88
>gi|389585933|dbj|GAB68663.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 662
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 9/82 (10%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG---------CAFVCMNRRQDAAK 209
L++G+LS V EE L FG++G V S+ ++ PR FVC R DA
Sbjct: 166 ANLYLGNLSAEVTEEYLCQRFGKFGKVNSVKIMYPRTDEDKKKARISGFVCFENRDDAEN 225
Query: 210 ALYKLKNTKLQGKTITLAWAPG 231
A L ++ G + + W+
Sbjct: 226 ARDALDGVEMFGNIVKVGWSKA 247
>gi|195041825|ref|XP_001991324.1| GH12116 [Drosophila grimshawi]
gi|193901082|gb|EDV99948.1| GH12116 [Drosophila grimshawi]
Length = 918
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMN 202
AR G +++ T L++ +LS+ + +++L F +G +V N++ PRG AFV N
Sbjct: 259 ARPGGQSIKDTNLYVINLSRNINDDQLDRIFSPFGLIVQRNILRDKLTGRPRGVAFVRYN 318
Query: 203 RRQDAAKALYKLKNTKLQGKT 223
+R++A +A+ L NT +G +
Sbjct: 319 KREEAQEAIMALNNTVPEGAS 339
>gi|5815237|gb|AAD52611.1| splicing factor SR1C [Arabidopsis thaliana]
Length = 276
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL-IPPR--GCAFVCMNRRQDAAK 209
+ + S T+++G+L ++E E+ D F +YG VV I+L +PPR G AFV + +DA
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 210 ALYKLKNTKLQGKTITLAWAPGKGMKDKD 238
A++ G + + A G G + D
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHG-GRRSSD 88
>gi|224133226|ref|XP_002327991.1| predicted protein [Populus trichocarpa]
gi|222837400|gb|EEE75779.1| predicted protein [Populus trichocarpa]
Length = 934
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 28/92 (30%), Positives = 48/92 (52%), Gaps = 1/92 (1%)
Query: 145 AEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRR 204
+E +N E S LW+G++S+ V + +L + F ++G + S+ R AFV
Sbjct: 16 SETDQQNSAEVKESNNLWVGNISREVADSDLMELFAQFGALDSVTTYSARSYAFVYFKHV 75
Query: 205 QDAAKALYKLKNTKLQGKTITLAWA-PGKGMK 235
+DA +A L+ + L+G I + +A P K K
Sbjct: 76 EDAKQAKDALQGSSLRGNQIKIEFARPAKPSK 107
Score = 41.2 bits (95), Expect = 0.47, Method: Composition-based stats.
Identities = 22/90 (24%), Positives = 44/90 (48%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
S LW+G +S V EE L + F ++G + + R A+V + +DA +A+ +
Sbjct: 106 SKYLWVGGISSSVSEERLEEEFLKFGKIEDFKFLRDRKIAYVEYLKLEDAFEAMKNMNGK 165
Query: 218 KLQGKTITLAWAPGKGMKDKDWKDFWEVQD 247
K+ G I + + + + + DF + ++
Sbjct: 166 KIGGDQIRVDFLRSQSTRREQLPDFLDSRE 195
>gi|195347606|ref|XP_002040343.1| GM19131 [Drosophila sechellia]
gi|194121771|gb|EDW43814.1| GM19131 [Drosophila sechellia]
Length = 488
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 10/94 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMN 202
AR G +++ T L++ +LS+ + ++ L F YG +V N++ PRG AFV N
Sbjct: 169 ARPGGQSIKDTNLYVINLSRNINDDMLDRIFSPYGLIVQRNILRDKLTGRPRGVAFVRYN 228
Query: 203 RRQDAAKALYKLKNTKLQGKT----ITLAWAPGK 232
+R++A +A+ L NT +G + + LA GK
Sbjct: 229 KREEAQEAIKALNNTVPEGGSQPIWVRLAEEHGK 262
>gi|88808896|ref|ZP_01124405.1| RNA-binding protein RbpD [Synechococcus sp. WH 7805]
gi|88786838|gb|EAR17996.1| RNA-binding protein RbpD [Synechococcus sp. WH 7805]
Length = 115
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 6/71 (8%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINL------IPPRGCAFVCMNRRQDAAKALYK 213
T++IG+LS ++E+L D F +YG+V S +L RG FV MN QD KA+
Sbjct: 2 TIYIGNLSFQAEQEDLLDLFSQYGEVKSASLPLDRETGRKRGFGFVEMNSDQDEQKAIDD 61
Query: 214 LKNTKLQGKTI 224
L+N + G+ I
Sbjct: 62 LQNVEWMGRMI 72
>gi|322778821|gb|EFZ09237.1| hypothetical protein SINV_07840 [Solenopsis invicta]
Length = 606
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI-----PPRGC-AFVCMNRRQDAA 208
N S LW+ LS + +L F +YG V+ ++ P C +V M+ +DAA
Sbjct: 13 NASSRNLWVSGLSSSTRATDLKQIFSKYGKVIGAKVVTNARTPGARCYGYVTMSSSEDAA 72
Query: 209 KALYKLKNTKLQGKTITLAWAPG 231
K + L T+L G+ I++ A G
Sbjct: 73 KCIQHLHRTELHGRVISVEKAKG 95
>gi|50311447|ref|XP_455748.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644884|emb|CAG98456.1| KLLA0F14861p [Kluyveromyces lactis]
Length = 589
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 39/72 (54%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT++IG LS L+ E+EL F +G +V + + +GC FV R A A+ K++
Sbjct: 315 NTTVFIGGLSTLITEDELRSYFQPFGQIVYVKIPVGKGCGFVQYVDRISAETAISKMQGF 374
Query: 218 KLQGKTITLAWA 229
+ I L+W
Sbjct: 375 PIGNSRIRLSWG 386
>gi|399217792|emb|CCF74679.1| unnamed protein product [Babesia microti strain RI]
Length = 339
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 169 LVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAK-ALYKLKNTKLQGKTITLA 227
+V E+ L F +YG V SI LIP CAF+ +RR DA + A + K +L+ + +
Sbjct: 248 IVGEDNLQTHFSKYGKVASIKLIPKLACAFITFDRRSDAEQAAFHSRKGLELESIPLNIT 307
Query: 228 WA 229
WA
Sbjct: 308 WA 309
>gi|357131986|ref|XP_003567614.1| PREDICTED: pre-mRNA-splicing factor SF2-like [Brachypodium
distachyon]
Length = 262
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 152 GVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL-IPPR--GCAFVCMNRRQDAA 208
G N C T+++G+L ++E E+ D F +YG +V I+L IPPR G AFV +DA
Sbjct: 2 GRTNSC--TIYVGNLPGDIREREVEDLFYKYGRIVDIDLKIPPRPPGYAFVEFEDPRDAD 59
Query: 209 KALYKLKNTKLQGKTITLAWAPG 231
A+Y G + + A G
Sbjct: 60 DAIYGRDGYNFDGYRLRVELAHG 82
>gi|224005046|ref|XP_002296174.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209586206|gb|ACI64891.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 356
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 46/89 (51%), Gaps = 13/89 (14%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPP---------RGCAFVCMNRRQDAA 208
+T +++G+L + EEEL+D F ++GD+ S+ ++ P R FVC R DA
Sbjct: 13 TTNIFVGNLDPMSTEEELTDVFRQFGDLYSVKIMWPRTAEERSRNRNTGFVCFMSRADAE 72
Query: 209 KALYKLKNTKL--QGKTITLAWAPGKGMK 235
A+ L + G+ + L W GK +K
Sbjct: 73 DAMDALSDADPLDTGRRLKLGW--GKNVK 99
>gi|126133234|ref|XP_001383142.1| hypothetical protein PICST_55837 [Scheffersomyces stipitis CBS
6054]
gi|126094967|gb|ABN65113.1| polyadenylated RNA-binding protein, partial [Scheffersomyces
stipitis CBS 6054]
Length = 453
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 37/71 (52%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTK 218
TT+++G+++ Q+ EL +G +V P RGCAFV + + AA A+ +L
Sbjct: 356 TTVYLGNIAHFTQQNELIPLLQNFGFIVDFKFHPERGCAFVKYDSHERAALAIVQLAGFT 415
Query: 219 LQGKTITLAWA 229
+ G+ + W
Sbjct: 416 VNGRPLKCGWG 426
>gi|356537206|ref|XP_003537120.1| PREDICTED: 33 kDa ribonucleoprotein, chloroplastic-like [Glycine
max]
Length = 298
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 54/109 (49%), Gaps = 8/109 (7%)
Query: 135 DPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI--- 191
D P+ RE + N S+ L++G+L + +L+ FGE G+VVS+ ++
Sbjct: 64 DTQKPLQRETFQKPEPNASHTNQSSRLFVGNLPYSLLSSQLAQRFGEAGNVVSVEIVYDD 123
Query: 192 ---PPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA--PGKGMK 235
RG AFV M +DA +A+ +++ G+ + + + P +G +
Sbjct: 124 IMDRSRGFAFVTMGSMEDAERAIRMFDGSEIGGRIMKVNFTAIPKRGKR 172
>gi|384491350|gb|EIE82546.1| hypothetical protein RO3G_07251 [Rhizopus delemar RA 99-880]
Length = 348
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 44/84 (52%), Gaps = 2/84 (2%)
Query: 159 TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTK 218
T++++G++ V + +L F +G V + RG AFV M+ ++AA A+ L+N
Sbjct: 224 TSIYVGNIPLNVSQNDLVQPFQRFGYVQEVKFQADRGFAFVKMDTHENAANAIVHLQNMS 283
Query: 219 LQGKTITLAWAPGKGMKDKDWKDF 242
+ G L+W GK W+++
Sbjct: 284 INGNVTKLSW--GKDRPPPGWQNY 305
>gi|357614550|gb|EHJ69142.1| hypothetical protein KGM_18723 [Danaus plexippus]
Length = 877
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 9/81 (11%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRG---------CAFVCMNRRQDAA 208
+T L++G+L+ + E++L + FG YG + SI ++ PR C FV R+D
Sbjct: 161 TTNLYLGNLNPKITEQQLMEIFGRYGPLASIKIMWPRSDEEKARGRNCGFVAFMSRKDGE 220
Query: 209 KALYKLKNTKLQGKTITLAWA 229
+AL + ++ + L W
Sbjct: 221 RALRCINGKEIMNYEMKLGWG 241
>gi|346464537|gb|AEO32113.1| hypothetical protein [Amblyomma maculatum]
Length = 501
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 44/79 (55%), Gaps = 1/79 (1%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNTKLQ 220
L++G+L + EEE FGE+G++V + L +G FV ++R A A L NT +
Sbjct: 121 LFVGNLGANMTEEEFRRLFGEFGELVEVFLHAQKGFGFVKFDQRHQAEAAKAALDNTPHE 180
Query: 221 GKTITLAWAP-GKGMKDKD 238
G+ + + +A G +K K+
Sbjct: 181 GRYLQVRFATQGSSLKVKN 199
>gi|356538948|ref|XP_003537962.1| PREDICTED: uncharacterized RNA-binding protein C23E6.01c-like
isoform 1 [Glycine max]
Length = 401
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/104 (29%), Positives = 52/104 (50%), Gaps = 6/104 (5%)
Query: 144 LAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNR 203
++ + N V N TT+ IG+L V EEEL TF ++GD+V + + +G +V
Sbjct: 202 VSAVAPENDVNN---TTVCIGNLDLNVTEEELKQTFMQFGDIVLVKIYAGKGYGYVQFGT 258
Query: 204 RQDAAKALYKLKNTKLQGKTITLAWAPGKGMKDK-DWKDFWEVQ 246
R A A+ +++ + + I ++W G M + D W VQ
Sbjct: 259 RVSAEDAIQRMQGKVIGQQVIQISW--GSSMTARQDVPGGWGVQ 300
Score = 40.4 bits (93), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 33/78 (42%), Gaps = 8/78 (10%)
Query: 160 TLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMNRRQDAAKALYK 213
TLWIG L V E LS F G+VVSI +I P G FV A L
Sbjct: 11 TLWIGDLQYWVDESYLSQCFAHNGEVVSIKIIRNKLTGQPEGYGFVEFVSHASAEAFLRT 70
Query: 214 LKNTKLQG--KTITLAWA 229
++ G +T L WA
Sbjct: 71 YNGAQMPGTEQTFRLNWA 88
>gi|198470946|ref|XP_002133619.1| GA22715 [Drosophila pseudoobscura pseudoobscura]
gi|198145693|gb|EDY72246.1| GA22715 [Drosophila pseudoobscura pseudoobscura]
Length = 672
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 51/95 (53%), Gaps = 10/95 (10%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMN 202
AR G +++ T L++ +L + + ++ L+ TF +G +V N++ PRG AFV +
Sbjct: 196 ARPGGQSIKDTNLYVINLPRNIDDDMLTRTFSPFGQIVQRNILRDKLTGRPRGVAFVRFS 255
Query: 203 RRQDAAKALYKLKNTKLQGKT----ITLAWAPGKG 233
+R++A AL L NT G T + LA GK
Sbjct: 256 KREEAQDALNTLNNTVPLGCTQPIWVRLAEEHGKA 290
>gi|5815239|gb|AAD52613.1| splicing factor SR1E [Arabidopsis thaliana]
Length = 270
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL-IPPR--GCAFVCMNRRQDAAK 209
+ + S T+++G+L ++E E+ D F +YG VV I+L +PPR G AFV + +DA
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 210 ALYKLKNTKLQGKTITLAWAPGKGMKDKD 238
A++ G + + A G G + D
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHG-GRRSSD 88
>gi|348535548|ref|XP_003455262.1| PREDICTED: pre-mRNA-splicing factor RBM22-like [Oreochromis
niloticus]
Length = 427
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 51/98 (52%), Gaps = 6/98 (6%)
Query: 154 ENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYK 213
E+ TTL+IG L V + +L F ++G++ +I ++ + CAF+ RQ A A K
Sbjct: 227 EDKSITTLYIGGLGDTVTDGDLKSHFYQFGEIRTITIVQRQQCAFIQFATRQSAETAAEK 286
Query: 214 LKNTK-LQGKTITLAWAPGKGMKDKDWKDFWEVQDGVS 250
N + G+ +T+ W + + K+ ++DGVS
Sbjct: 287 SFNKLIINGRRLTVKWGRSQAARGKEG-----IKDGVS 319
>gi|221060638|ref|XP_002260964.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|193811038|emb|CAQ42936.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 648
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 47/106 (44%), Gaps = 14/106 (13%)
Query: 140 IHRELAEIQARNGVENMCS-----TTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPR 194
I R+L EI+ + + L++G+LS V EE L FG++G V S+ ++ PR
Sbjct: 129 IKRKLIEIEKNETLFSYAPRKDRVANLYLGNLSPEVTEEYLCQRFGKFGKVNSVKIMYPR 188
Query: 195 G---------CAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWAPG 231
FVC R DA A L ++ G + + W+
Sbjct: 189 TDEDKKKARISGFVCFENRDDAENARDALDGVEMFGNIVKVGWSKA 234
>gi|384254263|gb|EIE27737.1| hypothetical protein COCSUDRAFT_39322 [Coccomyxa subellipsoidea
C-169]
Length = 567
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 49/96 (51%), Gaps = 6/96 (6%)
Query: 22 SKAKITAITRSAIRAIKFYKHVVQSVEKFIIKCKPEYKVPALYVIDSLVRQSRHQFQDKD 81
SK I +T A +K + ++EK I+KC P +K+ LY++DS+++ R +
Sbjct: 24 SKPIINTLTMLASENVKAASSIAAAIEKHILKCSPTHKLYGLYLMDSIIKNVRQPYTS-- 81
Query: 82 VFGPRFARNLKATFQHLYQCPPEDKSKIIRVLNLWQ 117
F+R L + + + P+ + ++ ++ N W+
Sbjct: 82 ----LFSRTLPEVYMNAWSAAPQSRPQLQKLFNFWK 113
>gi|17531963|ref|NP_495120.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
gi|373219011|emb|CCD65016.1| Protein TIAR-1, isoform b [Caenorhabditis elegans]
Length = 376
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 132 DMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI 191
D P+H + EI + +N T++++G+++ L E+E+ F +G + + +
Sbjct: 185 DQEKPSHYNEKSYDEIYNQTSGDN---TSVYVGNIASLT-EDEIRQGFASFGRITEVRIF 240
Query: 192 PPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+G AFV + + AAKA+ ++ N + G+ + +W
Sbjct: 241 KMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWG 278
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVS------INLIPPRGCAFVCMNRRQDAAKALYKL 214
+++G LS V ++L + F +GDV N +G FV +R++A +A+ ++
Sbjct: 105 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 164
Query: 215 KNTKLQGKTITLAWAPGK 232
L +TI WA K
Sbjct: 165 NGQWLGRRTIRTNWATRK 182
>gi|406988412|gb|EKE08420.1| RNP-1 like protein RNA-binding protein [uncultured bacterium]
Length = 123
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 6/81 (7%)
Query: 155 NMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMNRRQDAA 208
N + L++G+L+ E+++ + FG YG+V + +I RG AFV M +A
Sbjct: 2 NQQNQKLYVGNLNFDASEDQVRELFGSYGEVQEVKIIMDRFSGRSRGFAFVRMATADEAG 61
Query: 209 KALYKLKNTKLQGKTITLAWA 229
KA L QGK++ + WA
Sbjct: 62 KAKDALSGQPFQGKSLVIDWA 82
>gi|50304975|ref|XP_452445.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641578|emb|CAH01296.1| KLLA0C05522p [Kluyveromyces lactis]
Length = 540
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 40/74 (54%)
Query: 156 MCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLK 215
+ STT+++G L+ + E +L + F +G + + + P + C FV N R +A A+ L+
Sbjct: 442 VSSTTVFVGGLNPNINELQLFELFKPFGTITDVKIPPGKQCGFVKYNERLEAEAAINGLQ 501
Query: 216 NTKLQGKTITLAWA 229
+ G I L+W
Sbjct: 502 GFIIMGSPIRLSWG 515
>gi|5815236|gb|AAD52610.1| splicing factor SR1B [Arabidopsis thaliana]
Length = 289
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL-IPPR--GCAFVCMNRRQDAAK 209
+ + S T+++G+L ++E E+ D F +YG VV I+L +PPR G AFV + +DA
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 210 ALYKLKNTKLQGKTITLAWAPGKGMKDKD 238
A++ G + + A G G + D
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHG-GRRSSD 88
>gi|30678395|ref|NP_850934.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|22135918|gb|AAM91541.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|30023782|gb|AAP13424.1| At1g02840 [Arabidopsis thaliana]
gi|332189357|gb|AEE27478.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 285
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL-IPPR--GCAFVCMNRRQDAAK 209
+ + S T+++G+L ++E E+ D F +YG VV I+L +PPR G AFV + +DA
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 210 ALYKLKNTKLQGKTITLAWAPGKGMKDKD 238
A++ G + + A G G + D
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHG-GRRSSD 88
>gi|15822703|gb|AAL07518.1| RNA-binding protein precursor [Nicotiana tabacum]
Length = 277
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI------PPRGCAFVCMNRRQD 206
+ +M S+ L++G LS E L + F +YGDV+ +I RG F+ ++
Sbjct: 34 IRSMSSSKLFVGGLSYGTDESSLKEAFSQYGDVIEARVIMDRDTGRSRGFGFISFPSSEE 93
Query: 207 AAKALYKLKNTKLQGKTITLAWA 229
AA AL + L G+ I + +A
Sbjct: 94 AASALQAMDGQDLHGRRIRVNYA 116
>gi|406880229|gb|EKD28634.1| RNA-binding protein [uncultured bacterium]
Length = 95
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMNRRQDAAKALYKL 214
L++G+LS EE++ F G V S+N+I P+G AFV M + D KA+ +L
Sbjct: 3 LYVGNLSYDATEEDVRQIFEGVGPVSSVNMITDRDTGRPKGFAFVEMENKNDGDKAISEL 62
Query: 215 KNTKLQGKTITLAWA 229
+ ++G++I ++ A
Sbjct: 63 NDVDVKGRSIKVSVA 77
>gi|149061996|gb|EDM12419.1| rCG48334, isoform CRA_d [Rattus norvegicus]
Length = 173
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNQELRAKFEEYGPVIECDIVKDY--AFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGKTITLAWAPGKGMKDKDW 239
+ QG++++ + +W
Sbjct: 135 EFQGESLSFGRVLCTRLLGTNW 156
>gi|21618243|gb|AAM67293.1| nuclear acid binding protein, putative [Arabidopsis thaliana]
Length = 392
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
+ T+++G + V +E+L F ++G+VVS+ + +GC FV R+ A A+ L
Sbjct: 276 TNATIFVGGIDPDVIDEDLRQPFSQFGEVVSVKIPVGKGCGFVQFADRKSAEDAIESLNG 335
Query: 217 TKLQGKTITLAWA 229
T + T+ L+W
Sbjct: 336 TVIGKNTVRLSWG 348
>gi|17531965|ref|NP_495121.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
gi|373219010|emb|CCD65015.1| Protein TIAR-1, isoform a [Caenorhabditis elegans]
Length = 408
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 132 DMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI 191
D P+H + EI + +N T++++G+++ L E+E+ F +G + + +
Sbjct: 217 DQEKPSHYNEKSYDEIYNQTSGDN---TSVYVGNIASLT-EDEIRQGFASFGRITEVRIF 272
Query: 192 PPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+G AFV + + AAKA+ ++ N + G+ + +W
Sbjct: 273 KMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWG 310
Score = 39.3 bits (90), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVS------INLIPPRGCAFVCMNRRQDAAKALYKL 214
+++G LS V ++L + F +GDV N +G FV +R++A +A+ ++
Sbjct: 137 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 196
Query: 215 KNTKLQGKTITLAWAPGK 232
L +TI WA K
Sbjct: 197 NGQWLGRRTIRTNWATRK 214
>gi|30678391|ref|NP_850933.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|30678398|ref|NP_563665.3| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|3929368|sp|O22315.1|SFRS1_ARATH RecName: Full=Pre-mRNA-splicing factor SF2; AltName: Full=SR1
protein
gi|6056417|gb|AAF02881.1|AC009525_15 alternative splicing factor SF2a [Arabidopsis thaliana]
gi|2443472|gb|AAB71385.1| ASF/SF2 homolog [Arabidopsis thaliana]
gi|21554051|gb|AAM63132.1| SF2/ASF-like splicing modulator Srp30, putative [Arabidopsis
thaliana]
gi|26451794|dbj|BAC42991.1| putative ribonucleoprotein SF-2 [Arabidopsis thaliana]
gi|332189356|gb|AEE27477.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
gi|332189358|gb|AEE27479.1| Pre-mRNA-splicing factor SF2 [Arabidopsis thaliana]
Length = 303
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL-IPPR--GCAFVCMNRRQDAAK 209
+ + S T+++G+L ++E E+ D F +YG VV I+L +PPR G AFV + +DA
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 210 ALYKLKNTKLQGKTITLAWAPGKGMKDKD 238
A++ G + + A G G + D
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHG-GRRSSD 88
>gi|5815235|gb|AAD52609.1|AF173640_1 splicing factor SR1 [Arabidopsis thaliana]
Length = 307
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL-IPPR--GCAFVCMNRRQDAAK 209
+ + S T+++G+L ++E E+ D F +YG VV I+L +PPR G AFV + +DA
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 210 ALYKLKNTKLQGKTITLAWAPGKGMKDKD 238
A++ G + + A G G + D
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHG-GRRSSD 88
>gi|326513618|dbj|BAJ87828.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 388
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 39/73 (53%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
++T+++G L E+ L F YG+VV + + + C FV R A +AL L+
Sbjct: 276 SNSTIFVGGLDPSATEDVLKQVFTPYGEVVHVKIPVGKRCGFVQYASRSSAEEALLMLQG 335
Query: 217 TKLQGKTITLAWA 229
T ++G+ + L+W
Sbjct: 336 TMIEGQNVRLSWG 348
>gi|32564506|ref|NP_871980.1| Protein TIAR-1, isoform f [Caenorhabditis elegans]
gi|373219014|emb|CCD65019.1| Protein TIAR-1, isoform f [Caenorhabditis elegans]
Length = 295
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 132 DMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI 191
D P+H + EI + +N T++++G+++ L E+E+ F +G + + +
Sbjct: 104 DQEKPSHYNEKSYDEIYNQTSGDN---TSVYVGNIASLT-EDEIRQGFASFGRITEVRIF 159
Query: 192 PPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+G AFV + + AAKA+ ++ N + G+ + +W
Sbjct: 160 KMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWG 197
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVS------INLIPPRGCAFVCMNRRQDAAKALYKL 214
+++G LS V ++L + F +GDV N +G FV +R++A +A+ ++
Sbjct: 24 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 83
Query: 215 KNTKLQGKTITLAWAPGK 232
L +TI WA K
Sbjct: 84 NGQWLGRRTIRTNWATRK 101
>gi|307199187|gb|EFN79874.1| Protein sex-lethal [Harpegnathos saltator]
Length = 217
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/105 (25%), Positives = 56/105 (53%), Gaps = 8/105 (7%)
Query: 149 ARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMN 202
AR E + T L++ +L + + E ++ + F +YG++V N++ PRG AFV +
Sbjct: 105 ARPSGEEIKETNLYVTNLPRNITESQIDEIFSKYGNIVQKNILKDKLTGLPRGVAFVRFD 164
Query: 203 RRQDAAKALYKLKNTKLQGKT--ITLAWAPGKGMKDKDWKDFWEV 245
+R++A +A+ +L T +G + +++ A G + + W+
Sbjct: 165 KREEAQEAIARLHGTIPEGGSEPLSVKIAEEHGKQKAAYYAGWQA 209
>gi|32564504|ref|NP_495123.2| Protein TIAR-1, isoform e [Caenorhabditis elegans]
gi|373219013|emb|CCD65018.1| Protein TIAR-1, isoform e [Caenorhabditis elegans]
Length = 305
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 132 DMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI 191
D P+H + EI + +N T++++G+++ L E+E+ F +G + + +
Sbjct: 114 DQEKPSHYNEKSYDEIYNQTSGDN---TSVYVGNIASLT-EDEIRQGFASFGRITEVRIF 169
Query: 192 PPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+G AFV + + AAKA+ ++ N + G+ + +W
Sbjct: 170 KMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWG 207
Score = 38.9 bits (89), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVS------INLIPPRGCAFVCMNRRQDAAKALYKL 214
+++G LS V ++L + F +GDV N +G FV +R++A +A+ ++
Sbjct: 34 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 93
Query: 215 KNTKLQGKTITLAWAPGK 232
L +TI WA K
Sbjct: 94 NGQWLGRRTIRTNWATRK 111
>gi|341900388|gb|EGT56323.1| CBN-TIAR-1 protein [Caenorhabditis brenneri]
Length = 399
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 132 DMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI 191
D P H + EI + +N T++++G+++ L EE++ F YG + + +
Sbjct: 213 DQEKPVHYNEKSYDEIYNQTSGDN---TSVYVGNIANL-SEEDIRQAFASYGRISEVRIF 268
Query: 192 PPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+G AFV + + AAKA+ ++ N ++ G+ + +W
Sbjct: 269 KMQGYAFVKFDNKDAAAKAIVQMNNQEVGGQLVRCSWG 306
Score = 39.3 bits (90), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVS------INLIPPRGCAFVCMNRRQDAAKALYKL 214
+++G LS V ++L + F +GDV N +G FV +R++A +A+ ++
Sbjct: 133 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 192
Query: 215 KNTKLQGKTITLAWAPGK 232
L +TI WA K
Sbjct: 193 NGQWLGRRTIRTNWATRK 210
>gi|166844|gb|AAA32856.1| ribonucleoprotein [Arabidopsis thaliana]
gi|1582992|prf||2119375A Ser/Arg-rich protein
Length = 303
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 48/89 (53%), Gaps = 4/89 (4%)
Query: 153 VENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINL-IPPR--GCAFVCMNRRQDAAK 209
+ + S T+++G+L ++E E+ D F +YG VV I+L +PPR G AFV + +DA
Sbjct: 1 MSSRSSRTVYVGNLPGDIREREVEDLFSKYGPVVQIDLKVPPRPPGYAFVEFDDARDAED 60
Query: 210 ALYKLKNTKLQGKTITLAWAPGKGMKDKD 238
A++ G + + A G G + D
Sbjct: 61 AIHGRDGYDFDGHRLRVELAHG-GRRSSD 88
>gi|426369357|ref|XP_004051659.1| PREDICTED: RNA-binding protein 4B isoform 3 [Gorilla gorilla
gorilla]
Length = 151
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 5/72 (6%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L NT
Sbjct: 77 STKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDNT 134
Query: 218 KLQGKTITLAWA 229
+ QG+ L WA
Sbjct: 135 EFQGE---LLWA 143
>gi|7446337|pir||T15542 hypothetical protein C18A3.5 - Caenorhabditis elegans
Length = 448
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 51/98 (52%), Gaps = 4/98 (4%)
Query: 132 DMADPNHPIHRELAEIQARNGVENMCSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLI 191
D P+H + EI + +N T++++G+++ L E+E+ F +G + + +
Sbjct: 257 DQEKPSHYNEKSYDEIYNQTSGDN---TSVYVGNIASLT-EDEIRQGFASFGRITEVRIF 312
Query: 192 PPRGCAFVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
+G AFV + + AAKA+ ++ N + G+ + +W
Sbjct: 313 KMQGYAFVKFDNKDAAAKAIVQMNNQDVGGQLVRCSWG 350
Score = 38.9 bits (89), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 6/78 (7%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVS------INLIPPRGCAFVCMNRRQDAAKALYKL 214
+++G LS V ++L + F +GDV N +G FV +R++A +A+ ++
Sbjct: 177 VFVGDLSSEVDNQKLREAFQPFGDVSDAKVIRDTNTTKSKGYGFVSYPKREEAERAIEQM 236
Query: 215 KNTKLQGKTITLAWAPGK 232
L +TI WA K
Sbjct: 237 NGQWLGRRTIRTNWATRK 254
>gi|391330636|ref|XP_003739762.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 364
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 141 HRELA--EIQARNGVENMCSTTLWIGHLSKLVQEEE-LSDTFGEYGDVVSINLIPPRGCA 197
HR L E+ A++ N T++ G L+++ E+ L F E+G++V I L +G A
Sbjct: 197 HRALNYDEVFAQSSPSN---CTVYCGGLNQMASSEDFLRQAFDEFGEIVDIRLFKDKGYA 253
Query: 198 FVCMNRRQDAAKALYKLKNTKLQGKTITLAWA 229
F+ N ++ A +A+ N+ + G+ + +W
Sbjct: 254 FIKFNSKESACRAIVARHNSDIGGQAVKCSWG 285
Score = 37.4 bits (85), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 37/78 (47%), Gaps = 6/78 (7%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVSINLIP------PRGCAFVCMNRRQDAAKALYKL 214
+++G LS ++ +L + F +G++ ++ +G FV +QDA A++ +
Sbjct: 106 IFVGDLSPQIETSDLREAFSPFGEISDCRVVKDATTQKSKGYGFVSFTNKQDAENAIHTM 165
Query: 215 KNTKLQGKTITLAWAPGK 232
+ L + I WA K
Sbjct: 166 DGSWLGSRAIRTNWASRK 183
>gi|115385346|ref|XP_001209220.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196912|gb|EAU38612.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 306
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 40/72 (55%)
Query: 158 STTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKNT 217
+TT+++G LS V E+EL F +G++ + + P +GC FV +R A A+ +++
Sbjct: 186 NTTVFVGGLSGYVTEDELRSFFQGFGEITYVKIPPGKGCGFVQFVQRHAAEMAINQMQGY 245
Query: 218 KLQGKTITLAWA 229
+ + L+W
Sbjct: 246 PIGNSRVRLSWG 257
>gi|83643064|ref|YP_431499.1| RNA-binding protein [Hahella chejuensis KCTC 2396]
gi|83631107|gb|ABC27074.1| RNA-binding protein (RRM domain) [Hahella chejuensis KCTC 2396]
Length = 90
Score = 48.5 bits (114), Expect = 0.003, Method: Composition-based stats.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 6/75 (8%)
Query: 161 LWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPR------GCAFVCMNRRQDAAKALYKL 214
+++G+L+ V EEEL + F +G+V S NLI R G AFV M+ +A A+ L
Sbjct: 3 IYVGNLAYGVTEEELREAFSSFGEVTSANLIIDRNTGQSKGFAFVEMSNNSEADAAIKGL 62
Query: 215 KNTKLQGKTITLAWA 229
+T L+G+ I + A
Sbjct: 63 NDTALKGRNIKVNQA 77
>gi|392344877|ref|XP_003749100.1| PREDICTED: RNA-binding protein 14-like [Rattus norvegicus]
Length = 404
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 157 CSTTLWIGHLSKLVQEEELSDTFGEYGDVVSINLIPPRGCAFVCMNRRQDAAKALYKLKN 216
ST L +G++S +EL F EYG V+ +++ + AFV M R +DA +A+ L N
Sbjct: 76 ASTKLHVGNISPTCTNQELRAKFEEYGPVIECDIV--KDYAFVHMERAEDAVEAIRGLDN 133
Query: 217 TKLQGKTITLA 227
T+ QG++++
Sbjct: 134 TEFQGESLSFG 144
>gi|296005401|ref|XP_002809024.1| RRM containing cyclophilin [Plasmodium falciparum 3D7]
gi|225631965|emb|CAX64305.1| RRM containing cyclophilin [Plasmodium falciparum 3D7]
Length = 125
Score = 48.5 bits (114), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Query: 154 ENMCSTTLWIGHLSKLVQEEELSDTFGEYGDV----VSINLIPP--RGCAFVCMNRRQDA 207
+N + L++G + + + E+ L D F +GD+ V +N+ RG AFV DA
Sbjct: 3 DNNATDILFVGGIDETIDEKSLYDIFSSFGDIRNIEVPLNMTTKKNRGFAFVEYVEVDDA 62
Query: 208 AKALYKLKNTKLQGKTITLAWAPGK 232
ALY + N +L GK I + ++ K
Sbjct: 63 KHALYNMNNFELNGKRIHVNYSKTK 87
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.137 0.424
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 4,627,144,932
Number of Sequences: 23463169
Number of extensions: 186204863
Number of successful extensions: 553114
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1755
Number of HSP's successfully gapped in prelim test: 5139
Number of HSP's that attempted gapping in prelim test: 545679
Number of HSP's gapped (non-prelim): 10112
length of query: 282
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 141
effective length of database: 9,050,888,538
effective search space: 1276175283858
effective search space used: 1276175283858
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 76 (33.9 bits)