Your job contains 1 sequence.
>psy3997
MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS
LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRV
VNAVLTQIDQLKKKSTGLSGRTLRKIPFLTFVKYISNNSVSMENFLIALEKTVLDLLVEE
KSLPLKRNTEVPNTYLHSNQRIHIYLMFCGTSYPLQHSKHFTELVQSHPGRCKVTSDDST
LNFSFSSLAVQHCIPL
The BLAST search returned 4 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy3997
(256 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040426-1488 - symbol:trip13 "thyroid hormon... 475 2.9e-54 2
FB|FBgn0051453 - symbol:pch2 species:7227 "Drosophila mel... 438 9.8e-50 2
UNIPROTKB|E1C6Q1 - symbol:TRIP13 "Pachytene checkpoint pr... 470 6.8e-47 2
UNIPROTKB|Q15645 - symbol:TRIP13 "Pachytene checkpoint pr... 481 7.9e-46 1
MGI|MGI:1916966 - symbol:Trip13 "thyroid hormone receptor... 478 1.6e-45 1
RGD|1308516 - symbol:Trip13 "thyroid hormone receptor int... 478 1.6e-45 1
UNIPROTKB|E2R222 - symbol:TRIP13 "Pachytene checkpoint pr... 476 2.7e-45 1
UNIPROTKB|F1N3B9 - symbol:TRIP13 "Uncharacterized protein... 473 5.6e-45 1
UNIPROTKB|Q6P4W8 - symbol:trip13 "Pachytene checkpoint pr... 473 5.6e-45 1
UNIPROTKB|D3K5L7 - symbol:TRIP13 "Pachytene checkpoint pr... 471 9.1e-45 1
WB|WBGene00008641 - symbol:pch-2 species:6239 "Caenorhabd... 401 1.7e-40 2
DICTYBASE|DDB_G0279111 - symbol:DDB_G0279111 "AAA ATPase ... 413 1.3e-38 1
UNIPROTKB|H0YAL2 - symbol:TRIP13 "Pachytene checkpoint pr... 348 9.8e-32 1
SGD|S000000390 - symbol:PCH2 "Nucleolar component of the ... 282 5.2e-24 1
UNIPROTKB|K7EM02 - symbol:KATNAL2 "Katanin p60 ATPase-con... 139 2.8e-09 1
UNIPROTKB|G4N517 - symbol:MGG_05193 "Cell division contro... 160 5.8e-09 1
DICTYBASE|DDB_G0288065 - symbol:cdcD "CDC48 family AAA AT... 159 7.2e-09 1
POMBASE|SPAC1565.08 - symbol:cdc48 "AAA family ATPase Cdc... 157 1.3e-08 1
ASPGD|ASPL0000069340 - symbol:AN7254 species:162425 "Emer... 156 1.8e-08 1
CGD|CAL0002187 - symbol:orf19.6432 species:5476 "Candida ... 154 2.8e-08 1
SGD|S000002284 - symbol:CDC48 "AAA ATPase involved in mul... 154 3.1e-08 1
UNIPROTKB|E1BYT2 - symbol:E1BYT2 "Uncharacterized protein... 129 3.8e-08 1
UNIPROTKB|H9KYT1 - symbol:LOC430766 "Uncharacterized prot... 150 4.9e-08 1
WB|WBGene00007352 - symbol:cdc-48.1 species:6239 "Caenorh... 152 5.1e-08 1
UNIPROTKB|P54811 - symbol:cdc-48.1 "Transitional endoplas... 152 5.1e-08 1
ZFIN|ZDB-GENE-030131-5408 - symbol:vcp "valosin containin... 151 6.8e-08 1
UNIPROTKB|E1BTS8 - symbol:LOC426240 "Uncharacterized prot... 150 8.8e-08 1
UNIPROTKB|P23787 - symbol:vcp "Transitional endoplasmic r... 150 8.8e-08 1
UNIPROTKB|Q6GL04 - symbol:vcp "Transitional endoplasmic r... 150 8.8e-08 1
UNIPROTKB|G3X757 - symbol:VCP "Transitional endoplasmic r... 150 8.8e-08 1
UNIPROTKB|Q3ZBT1 - symbol:VCP "Transitional endoplasmic r... 150 8.8e-08 1
UNIPROTKB|P55072 - symbol:VCP "Transitional endoplasmic r... 150 8.8e-08 1
UNIPROTKB|P03974 - symbol:VCP "Transitional endoplasmic r... 150 8.8e-08 1
MGI|MGI:99919 - symbol:Vcp "valosin containing protein" s... 150 8.8e-08 1
RGD|621595 - symbol:Vcp "valosin-containing protein" spec... 150 8.8e-08 1
UNIPROTKB|F1SIH8 - symbol:VCP "Transitional endoplasmic r... 150 8.8e-08 1
UNIPROTKB|F1P4V8 - symbol:LOC426240 "Uncharacterized prot... 150 8.9e-08 1
UNIPROTKB|E2RLQ9 - symbol:VCP "Uncharacterized protein" s... 150 9.1e-08 1
UNIPROTKB|I3LI39 - symbol:I3LI39 "Uncharacterized protein... 124 1.4e-07 1
ZFIN|ZDB-GENE-060312-22 - symbol:zgc:136908 "zgc:136908" ... 148 1.5e-07 1
GENEDB_PFALCIPARUM|PFF0940c - symbol:PFF0940c "cell divis... 148 1.6e-07 1
UNIPROTKB|C6KT34 - symbol:PFF0940c "Cell division cycle p... 148 1.6e-07 1
WB|WBGene00008053 - symbol:cdc-48.2 species:6239 "Caenorh... 147 2.0e-07 1
UNIPROTKB|P54812 - symbol:cdc-48.2 "Transitional endoplas... 147 2.0e-07 1
CGD|CAL0000732 - symbol:CDC48 species:5476 "Candida albic... 147 2.1e-07 1
UNIPROTKB|Q59WG3 - symbol:CDC48 "Putative uncharacterized... 147 2.1e-07 1
GENEDB_PFALCIPARUM|PF10_0081 - symbol:PF10_0081 "26S prot... 143 2.4e-07 1
UNIPROTKB|Q8IJW0 - symbol:PF10_0081 "26S proteasome regul... 143 2.4e-07 1
CGD|CAL0001552 - symbol:PR26 species:5476 "Candida albica... 142 2.7e-07 1
UNIPROTKB|Q5A0L8 - symbol:PR26 "Likely 26S proteasome reg... 142 2.7e-07 1
ASPGD|ASPL0000032311 - symbol:AN5747 species:162425 "Emer... 141 3.3e-07 1
POMBASE|SPBC947.01 - symbol:alf1 "ATP-dependent microtubu... 144 3.4e-07 1
UNIPROTKB|K7EIJ8 - symbol:KATNAL2 "Katanin p60 ATPase-con... 139 4.2e-07 1
FB|FBgn0261014 - symbol:TER94 "TER94" species:7227 "Droso... 144 4.4e-07 1
ASPGD|ASPL0000036562 - symbol:AN2904 species:162425 "Emer... 139 6.4e-07 1
TAIR|locus:2007574 - symbol:PEX6 "peroxin 6" species:3702... 143 7.2e-07 1
UNIPROTKB|E1BZ64 - symbol:KATNAL2 "Uncharacterized protei... 139 7.7e-07 1
TAIR|locus:2147670 - symbol:RPT6A "regulatory particle tr... 138 8.3e-07 1
TAIR|locus:2147685 - symbol:AT5G20000 species:3702 "Arabi... 138 8.3e-07 1
UNIPROTKB|Q8IYT4 - symbol:KATNAL2 "Katanin p60 ATPase-con... 139 9.6e-07 1
UNIPROTKB|F1M2L9 - symbol:Katnal2 "Protein Katnal2" speci... 137 9.7e-07 1
DICTYBASE|DDB_G0292788 - symbol:pex6 "peroxin 6" species:... 143 9.7e-07 1
POMBASE|SPBC23G7.12c - symbol:rpt6 "19S proteasome regula... 137 1.0e-06 1
SGD|S000002802 - symbol:RPT3 "ATPase of the 19S regulator... 137 1.1e-06 1
POMBASE|SPCC1682.16 - symbol:rpt4 "19S proteasome regulat... 136 1.2e-06 1
TAIR|locus:2028200 - symbol:AT1G45000 species:3702 "Arabi... 136 1.3e-06 1
TAIR|locus:2159996 - symbol:RPT4A "regulatory particle tr... 136 1.3e-06 1
UNIPROTKB|O50202 - symbol:arc "Proteasome-associated ATPa... 138 1.4e-06 1
UNIPROTKB|J9P5W4 - symbol:KATNAL2 "Uncharacterized protei... 135 1.6e-06 1
RGD|1564708 - symbol:Katnal2 "katanin p60 subunit A-like ... 137 1.6e-06 1
POMBASE|SPAC17A5.01 - symbol:pex6 "peroxin-6 (predicted)"... 140 1.6e-06 1
SGD|S000000284 - symbol:SEC18 "ATPase required for vesicu... 138 1.6e-06 2
MGI|MGI:1924234 - symbol:Katnal2 "katanin p60 subunit A-l... 137 1.7e-06 1
TAIR|locus:2085064 - symbol:CDC48 "cell division cycle 48... 139 1.7e-06 1
UNIPROTKB|I3LEM5 - symbol:KATNAL2 "Uncharacterized protei... 134 1.8e-06 1
ZFIN|ZDB-GENE-051113-156 - symbol:katnal2 "katanin p60 su... 136 1.8e-06 1
DICTYBASE|DDB_G0272777 - symbol:DDB_G0272777 "AAA ATPase ... 138 2.0e-06 1
POMBASE|SPAC328.04 - symbol:SPAC328.04 "AAA family ATPase... 138 2.0e-06 1
UNIPROTKB|J9NYM5 - symbol:KATNAL2 "Uncharacterized protei... 135 2.0e-06 1
UNIPROTKB|B4DR63 - symbol:PSMC1 "cDNA FLJ58247, highly si... 133 2.5e-06 1
RGD|1308825 - symbol:Psmc6 "proteasome (prosome, macropai... 133 2.7e-06 1
POMBASE|SPBC4.07c - symbol:rpt2 "19S proteasome regulator... 134 2.7e-06 1
UNIPROTKB|Q5ZKX2 - symbol:PSMC6 "Uncharacterized protein"... 133 2.8e-06 1
UNIPROTKB|F1MLV1 - symbol:PSMC6 "26S protease regulatory ... 133 2.8e-06 1
UNIPROTKB|Q2KIW6 - symbol:PSMC6 "26S protease regulatory ... 133 2.8e-06 1
UNIPROTKB|P62333 - symbol:PSMC6 "26S protease regulatory ... 133 2.8e-06 1
UNIPROTKB|P62335 - symbol:PSMC6 "26S protease regulatory ... 133 2.8e-06 1
MGI|MGI:1914339 - symbol:Psmc6 "proteasome (prosome, macr... 133 2.8e-06 1
ZFIN|ZDB-GENE-030131-304 - symbol:psmc6 "proteasome (pros... 133 2.8e-06 1
UNIPROTKB|E1BAN2 - symbol:KATNAL2 "Uncharacterized protei... 135 2.8e-06 1
UNIPROTKB|E2RK60 - symbol:KATNAL2 "Uncharacterized protei... 135 2.8e-06 1
POMBASE|SPAC1834.11c - symbol:sec18 "secretory pathway pr... 137 2.9e-06 1
WB|WBGene00010557 - symbol:mspn-1 species:6239 "Caenorhab... 132 2.9e-06 1
UNIPROTKB|J9P1N0 - symbol:PSMC6 "Uncharacterized protein"... 133 2.9e-06 1
TAIR|locus:2101933 - symbol:AtCDC48B "AT3G53230" species:... 137 3.0e-06 1
DICTYBASE|DDB_G0289003 - symbol:psmC4 "HIV TAT binding-pr... 133 3.0e-06 1
DICTYBASE|DDB_G0292382 - symbol:psmC5 "HIV TAT binding-pr... 133 3.0e-06 1
UNIPROTKB|F1NCS8 - symbol:PSMC6 "Uncharacterized protein"... 133 3.0e-06 1
UNIPROTKB|F1SFE6 - symbol:PSMC6 "Uncharacterized protein"... 133 3.0e-06 1
RGD|2318218 - symbol:LOC100365869 "proteasome (prosome, m... 133 3.0e-06 1
WARNING: Descriptions of 252 database sequences were not reported due to the
limiting value of parameter V = 100.
>ZFIN|ZDB-GENE-040426-1488 [details] [associations]
symbol:trip13 "thyroid hormone receptor interactor
13" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0007131 "reciprocal meiotic recombination" evidence=ISS]
[GO:0007283 "spermatogenesis" evidence=IEA;ISS] [GO:0048477
"oogenesis" evidence=IEA;ISS] [GO:0006302 "double-strand break
repair" evidence=ISS] [GO:0007130 "synaptonemal complex assembly"
evidence=ISS] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007126 "meiosis" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040426-1488 GO:GO:0005524 GO:GO:0030154
GO:GO:0048477 GO:GO:0007283 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0007131 GO:GO:0007130 HOGENOM:HOG000234557
CTD:9319 EMBL:BC056713 IPI:IPI00482940 RefSeq:NP_956876.1
UniGene:Dr.79579 ProteinModelPortal:Q6PH52 STRING:Q6PH52
GeneID:393554 KEGG:dre:393554 HOVERGEN:HBG052830 OrthoDB:EOG4STS4K
NextBio:20814575 ArrayExpress:Q6PH52 Uniprot:Q6PH52
Length = 424
Score = 475 (172.3 bits), Expect = 2.9e-54, Sum P(2) = 2.9e-54
Identities = 89/131 (67%), Positives = 112/131 (85%)
Query: 3 FSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLF 62
FS V SN+I+WNRVVLLHGPPGTGKTSLCK +AQKLSIRL +Y ++F+EINSHSLF
Sbjct: 151 FSDKNVDSNLIAWNRVVLLHGPPGTGKTSLCKGLAQKLSIRLSDRYAHSQFVEINSHSLF 210
Query: 63 SKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVN 122
SK+FSESGKLV KMF KI+E ++ +++LV +LIDE+ESLT AR + +GTEPSD +RVVN
Sbjct: 211 SKWFSESGKLVTKMFQKIQELIDDKDALVFVLIDEVESLTAARSAAQAGTEPSDAIRVVN 270
Query: 123 AVLTQIDQLKK 133
+VLTQ+DQ+K+
Sbjct: 271 SVLTQLDQIKR 281
Score = 103 (41.3 bits), Expect = 2.9e-54, Sum P(2) = 2.9e-54
Identities = 22/53 (41%), Positives = 33/53 (62%)
Query: 131 LKKKSTGLSGRTLRKIPFLTFVKYISNNSVSMENFLIALEKTVLDLLVEEKSL 183
+ ++S GLSGR LRKIPFL Y ++++++ FL A+E V E+ SL
Sbjct: 368 ISQRSVGLSGRALRKIPFLAHALYGKTSTMTLKGFLTAMEHAVNKQRQEQASL 420
>FB|FBgn0051453 [details] [associations]
symbol:pch2 species:7227 "Drosophila melanogaster"
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001270
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111
GeneTree:ENSGT00390000017432 EMBL:AY094800 RefSeq:NP_524282.4
UniGene:Dm.2464 SMR:Q8SX76 IntAct:Q8SX76 MINT:MINT-925991
STRING:Q8SX76 EnsemblMetazoa:FBtr0081898 GeneID:41013
KEGG:dme:Dmel_CG31453 UCSC:CG31453-RA CTD:41013 FlyBase:FBgn0051453
InParanoid:Q8SX76 OMA:AMSSNEP OrthoDB:EOG4J3TZK GenomeRNAi:41013
NextBio:821726 Uniprot:Q8SX76
Length = 421
Score = 438 (159.2 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 87/132 (65%), Positives = 104/132 (78%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+ FS +V +N+I+ NR++LLHGPPGTGKTSLCKA+AQKLSIR Q Y T +EINSHS
Sbjct: 151 LMFSEHRVDTNVIACNRLILLHGPPGTGKTSLCKALAQKLSIRTQGSYAYTHLVEINSHS 210
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRV 120
LFSK+FSESGKLV ++FNKI E V +LVC+LIDE+ESL AR S MS EP D +RV
Sbjct: 211 LFSKWFSESGKLVAQLFNKIAELVSDPNNLVCVLIDEVESLAYAR-SAMSSNEPRDAMRV 269
Query: 121 VNAVLTQIDQLK 132
VNAVLTQ+D LK
Sbjct: 270 VNAVLTQLDSLK 281
Score = 97 (39.2 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 24/65 (36%), Positives = 39/65 (60%)
Query: 128 IDQLKKKSTGLSGRTLRKIPFLTFVKYISNN------SVSMENFLIALEKTVLDLLVEEK 181
+ QL ++S GLSGRTLRK+P L +Y S+ +S+ +FL A+ + + L E++
Sbjct: 352 LTQLAERSVGLSGRTLRKLPLLAHAQYTSSTLFELDQKISLSDFLDAMLEALEQHLGEQR 411
Query: 182 SLPLK 186
L L+
Sbjct: 412 LLKLE 416
>UNIPROTKB|E1C6Q1 [details] [associations]
symbol:TRIP13 "Pachytene checkpoint protein 2 homolog"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000239 "pachytene" evidence=IEA] [GO:0001556 "oocyte
maturation" evidence=IEA] [GO:0001673 "male germ cell nucleus"
evidence=IEA] [GO:0007141 "male meiosis I" evidence=IEA]
[GO:0007144 "female meiosis I" evidence=IEA] [GO:0007286 "spermatid
development" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0048477 "oogenesis" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0007131 "reciprocal meiotic
recombination" evidence=ISS] [GO:0007130 "synaptonemal complex
assembly" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0030154
GO:GO:0048477 GO:GO:0007283 GO:GO:0001673 GO:GO:0006302
GO:GO:0017111 GO:GO:0007131 GO:GO:0007130 GO:GO:0007141
GO:GO:0000239 GO:GO:0007144 GeneTree:ENSGT00390000017432 CTD:9319
OMA:TEKIDMA EMBL:AADN02027348 IPI:IPI00594401 RefSeq:XP_418892.2
Ensembl:ENSGALT00000020433 GeneID:420798 KEGG:gga:420798
NextBio:20823662 Uniprot:E1C6Q1
Length = 432
Score = 470 (170.5 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 91/131 (69%), Positives = 111/131 (84%)
Query: 3 FSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLF 62
FS V SN+ISWNRVVLLHGPPGTGKTSLCKA+AQKL+IRL +Y+ + IEINSHSLF
Sbjct: 159 FSDRNVDSNLISWNRVVLLHGPPGTGKTSLCKALAQKLTIRLSYRYRYGQLIEINSHSLF 218
Query: 63 SKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVN 122
SK+FSESGKLV KMF KI+E ++ +++LV +LIDE+ESLT AR + +GTEPSD +RVVN
Sbjct: 219 SKWFSESGKLVTKMFQKIQELIDDKDALVFVLIDEVESLTAARSAFKAGTEPSDAIRVVN 278
Query: 123 AVLTQIDQLKK 133
AVL QIDQ+K+
Sbjct: 279 AVLMQIDQIKR 289
Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 38/95 (40%), Positives = 53/95 (55%)
Query: 87 EESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKKKSTGLSGRTLRKI 146
EE + C +I + L RE M G ++ R+ + VL +I ++S GLSGR LRK+
Sbjct: 336 EELMKCQIIYPRQHLLSLRELEMIGFVENNVSRL-SLVLKEIS---RRSEGLSGRVLRKL 391
Query: 147 PFLTFVKYISNNSVSMENFLIALEKTVLDLLVEEK 181
PFL YI + SV+M FL AL V+D EE+
Sbjct: 392 PFLAHALYIQSPSVTMTAFLQALS-LVVDKQFEER 425
Score = 38 (18.4 bits), Expect = 6.8e-47, Sum P(2) = 6.8e-47
Identities = 9/19 (47%), Positives = 9/19 (47%)
Query: 206 LMFCGTSYPLQHSKHFTEL 224
LM C YP QH EL
Sbjct: 338 LMKCQIIYPRQHLLSLREL 356
>UNIPROTKB|Q15645 [details] [associations]
symbol:TRIP13 "Pachytene checkpoint protein 2 homolog"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000239 "pachytene" evidence=IEA]
[GO:0001556 "oocyte maturation" evidence=IEA] [GO:0001673 "male
germ cell nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007144 "female meiosis I" evidence=IEA]
[GO:0007286 "spermatid development" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=NAS] [GO:0007283 "spermatogenesis" evidence=ISS]
[GO:0007131 "reciprocal meiotic recombination" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0048477
"oogenesis" evidence=ISS] [GO:0007130 "synaptonemal complex
assembly" evidence=ISS] [GO:0003712 "transcription cofactor
activity" evidence=TAS] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0005634 "nucleus"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0007286
GO:GO:0048477 GO:GO:0007283 GO:GO:0006366 GO:GO:0001673
GO:GO:0006302 GO:GO:0003712 eggNOG:COG0464 GO:GO:0017111
GO:GO:0001556 EMBL:CH471102 GO:GO:0007131 GO:GO:0007130
GO:GO:0007141 EMBL:AC122719 GO:GO:0000239 GO:GO:0007144
HOGENOM:HOG000234557 CTD:9319 OMA:TEKIDMA HOVERGEN:HBG052830
OrthoDB:EOG4STS4K EMBL:U96131 EMBL:CR456744 EMBL:BC000404
EMBL:BC019294 EMBL:L40384 IPI:IPI00003505 IPI:IPI00847729
RefSeq:NP_004228.1 UniGene:Hs.731712 ProteinModelPortal:Q15645
SMR:Q15645 IntAct:Q15645 MINT:MINT-1146352 STRING:Q15645
PhosphoSite:Q15645 DMDM:85541056 PaxDb:Q15645 PeptideAtlas:Q15645
PRIDE:Q15645 DNASU:9319 Ensembl:ENST00000166345 GeneID:9319
KEGG:hsa:9319 UCSC:uc003jbr.3 GeneCards:GC05P000892 HGNC:HGNC:12307
HPA:HPA005727 MIM:604507 neXtProt:NX_Q15645 PharmGKB:PA36986
InParanoid:Q15645 PhylomeDB:Q15645 GenomeRNAi:9319 NextBio:34909
Bgee:Q15645 CleanEx:HS_TRIP13 Genevestigator:Q15645
GermOnline:ENSG00000071539 Uniprot:Q15645
Length = 432
Score = 481 (174.4 bits), Expect = 7.9e-46, P = 7.9e-46
Identities = 92/133 (69%), Positives = 114/133 (85%)
Query: 3 FSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLF 62
FS V SN+I+WNRVVLLHGPPGTGKTSLCKA+AQKL+IRL S+Y+ + IEINSHSLF
Sbjct: 159 FSDKNVNSNLITWNRVVLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLF 218
Query: 63 SKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVN 122
SK+FSESGKLV KMF KI++ ++ +++LV +LIDE+ESLT AR + +GTEPSD +RVVN
Sbjct: 219 SKWFSESGKLVTKMFQKIQDLIDDKDALVFVLIDEVESLTAARNACRAGTEPSDAIRVVN 278
Query: 123 AVLTQIDQLKKKS 135
AVLTQIDQ+K+ S
Sbjct: 279 AVLTQIDQIKRHS 291
Score = 123 (48.4 bits), Expect = 4.8e-05, P = 4.8e-05
Identities = 34/97 (35%), Positives = 50/97 (51%)
Query: 87 EESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKKKSTGLSGRTLRKI 146
EE + C +I + L RE M G ++ V+ + ++ + +KS GLSGR LRK+
Sbjct: 336 EELMKCQIIYPRQQLLTLRELEMIGFIENN----VSKLSLLLNDISRKSEGLSGRVLRKL 391
Query: 147 PFLTFVKYISNNSVSMENFLIALEKTVLDLLVEEKSL 183
PFL Y+ +V++E FL AL V E K L
Sbjct: 392 PFLAHALYVQAPTVTIEGFLQALSLAVDKQFEERKKL 428
>MGI|MGI:1916966 [details] [associations]
symbol:Trip13 "thyroid hormone receptor interactor 13"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001556 "oocyte maturation" evidence=IMP]
[GO:0001673 "male germ cell nucleus" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0007126 "meiosis" evidence=IEA] [GO:0007130
"synaptonemal complex assembly" evidence=IMP] [GO:0007131
"reciprocal meiotic recombination" evidence=IMP] [GO:0007141 "male
meiosis I" evidence=IMP] [GO:0007144 "female meiosis I"
evidence=IMP] [GO:0007283 "spermatogenesis" evidence=IMP]
[GO:0007286 "spermatid development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030154
"cell differentiation" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IPI] [GO:0048477 "oogenesis" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1916966 GO:GO:0005524 GO:GO:0007286
GO:GO:0001673 GO:GO:0006302 eggNOG:COG0464 GO:GO:0017111
GO:GO:0001556 GO:GO:0007131 GO:GO:0007130 GO:GO:0007141
GO:GO:0000239 EMBL:CT010471 GO:GO:0007144 EMBL:CH466563
GeneTree:ENSGT00390000017432 HOGENOM:HOG000234557 CTD:9319
OMA:TEKIDMA HOVERGEN:HBG052830 OrthoDB:EOG4STS4K EMBL:AK010336
EMBL:AK142463 EMBL:AK146877 EMBL:AK151568 EMBL:BC023834
EMBL:BC126946 IPI:IPI00318000 IPI:IPI01019210 RefSeq:NP_081458.1
UniGene:Mm.275095 ProteinModelPortal:Q3UA06 SMR:Q3UA06
IntAct:Q3UA06 MINT:MINT-218773 STRING:Q3UA06 PhosphoSite:Q3UA06
PaxDb:Q3UA06 PRIDE:Q3UA06 Ensembl:ENSMUST00000022053 GeneID:69716
KEGG:mmu:69716 InParanoid:Q05CL4 NextBio:330162 Bgee:Q3UA06
CleanEx:MM_TRIP13 Genevestigator:Q3UA06
GermOnline:ENSMUSG00000021569 Uniprot:Q3UA06
Length = 432
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 92/133 (69%), Positives = 113/133 (84%)
Query: 3 FSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLF 62
FS V SN+I+WNRVVLLHGPPGTGKTSLCKA+AQKL+IRL S+Y+ + IEINSHSLF
Sbjct: 159 FSDKNVDSNLITWNRVVLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLF 218
Query: 63 SKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVN 122
SK+FSESGKLV KMF KI++ ++ +E+LV +LIDE+ESLT AR + +G EPSD +RVVN
Sbjct: 219 SKWFSESGKLVTKMFQKIQDLIDDKEALVFVLIDEVESLTAARNACRAGAEPSDAIRVVN 278
Query: 123 AVLTQIDQLKKKS 135
AVLTQIDQ+K+ S
Sbjct: 279 AVLTQIDQIKRHS 291
Score = 131 (51.2 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 39/95 (41%), Positives = 53/95 (55%)
Query: 87 EESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKKKSTGLSGRTLRKI 146
EE + C +I + L RE M G ++ V ++ +L++I +KS GLSGR LRK+
Sbjct: 336 EELMKCQIIYPRQQLLTLRELEMIGFIENN-VSKLSLLLSEIS---RKSEGLSGRVLRKL 391
Query: 147 PFLTFVKYISNNSVSMENFLIALEKTVLDLLVEEK 181
PFL YI SV++E FL AL V D EEK
Sbjct: 392 PFLAHALYIQAPSVTIEGFLQALSLAV-DKQFEEK 425
>RGD|1308516 [details] [associations]
symbol:Trip13 "thyroid hormone receptor interactor 13"
species:10116 "Rattus norvegicus" [GO:0000239 "pachytene"
evidence=IEA;ISO] [GO:0001556 "oocyte maturation" evidence=IEA;ISO]
[GO:0001673 "male germ cell nucleus" evidence=IEA;ISO] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006302 "double-strand break
repair" evidence=ISO;ISS] [GO:0007130 "synaptonemal complex
assembly" evidence=ISO;ISS] [GO:0007131 "reciprocal meiotic
recombination" evidence=ISO;ISS] [GO:0007141 "male meiosis I"
evidence=IEA;ISO] [GO:0007144 "female meiosis I" evidence=IEA;ISO]
[GO:0007283 "spermatogenesis" evidence=ISO;ISS] [GO:0007286
"spermatid development" evidence=IEA;ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0042802
"identical protein binding" evidence=IEA;ISO] [GO:0048477
"oogenesis" evidence=ISO;ISS] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 RGD:1308516 GO:GO:0005524
GO:GO:0007286 GO:GO:0048477 GO:GO:0007283 GO:GO:0001673
GO:GO:0006302 eggNOG:COG0464 GO:GO:0017111 GO:GO:0001556
GO:GO:0007131 GO:GO:0007130 GO:GO:0007141 GO:GO:0000239
GO:GO:0007144 GeneTree:ENSGT00390000017432 CTD:9319 OMA:TEKIDMA
HOVERGEN:HBG052830 OrthoDB:EOG4STS4K EMBL:BC083900 IPI:IPI00358856
RefSeq:NP_001011930.1 UniGene:Rn.11751 ProteinModelPortal:Q5XHZ9
STRING:Q5XHZ9 Ensembl:ENSRNOT00000021532 GeneID:292206
KEGG:rno:292206 UCSC:RGD:1308516 InParanoid:Q5XHZ9 NextBio:633927
Genevestigator:Q5XHZ9 GermOnline:ENSRNOG00000015810 Uniprot:Q5XHZ9
Length = 432
Score = 478 (173.3 bits), Expect = 1.6e-45, P = 1.6e-45
Identities = 92/133 (69%), Positives = 113/133 (84%)
Query: 3 FSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLF 62
FS V SN+I+WNRVVLLHGPPGTGKTSLCKA+AQKL+IRL S+Y+ + IEINSHSLF
Sbjct: 159 FSDKNVDSNLITWNRVVLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLF 218
Query: 63 SKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVN 122
SK+FSESGKLV KMF KI++ ++ +E+LV +LIDE+ESLT AR + +G EPSD +RVVN
Sbjct: 219 SKWFSESGKLVTKMFQKIQDLIDDKEALVFVLIDEVESLTAARNACRAGAEPSDAIRVVN 278
Query: 123 AVLTQIDQLKKKS 135
AVLTQIDQ+K+ S
Sbjct: 279 AVLTQIDQIKRHS 291
Score = 131 (51.2 bits), Expect = 5.8e-06, P = 5.8e-06
Identities = 39/95 (41%), Positives = 53/95 (55%)
Query: 87 EESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKKKSTGLSGRTLRKI 146
EE + C +I + L RE M G ++ V ++ +L++I +KS GLSGR LRK+
Sbjct: 336 EELMKCQIIYPRQQLLTLRELEMIGFIENN-VSKLSLLLSEIS---RKSEGLSGRVLRKL 391
Query: 147 PFLTFVKYISNNSVSMENFLIALEKTVLDLLVEEK 181
PFL YI SV++E FL AL V D EEK
Sbjct: 392 PFLAHALYIQAPSVTIEGFLQALSLAV-DKQFEEK 425
>UNIPROTKB|E2R222 [details] [associations]
symbol:TRIP13 "Pachytene checkpoint protein 2 homolog"
species:9615 "Canis lupus familiaris" [GO:0007283 "spermatogenesis"
evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0007130 "synaptonemal complex assembly"
evidence=ISS] [GO:0007131 "reciprocal meiotic recombination"
evidence=ISS] [GO:0048477 "oogenesis" evidence=ISS] [GO:0042802
"identical protein binding" evidence=IEA] [GO:0007286 "spermatid
development" evidence=IEA] [GO:0007144 "female meiosis I"
evidence=IEA] [GO:0007141 "male meiosis I" evidence=IEA]
[GO:0001673 "male germ cell nucleus" evidence=IEA] [GO:0001556
"oocyte maturation" evidence=IEA] [GO:0000239 "pachytene"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0007286 GO:GO:0048477
GO:GO:0007283 GO:GO:0001673 GO:GO:0006302 GO:GO:0017111
GO:GO:0001556 GO:GO:0007131 GO:GO:0007130 GO:GO:0007141
GO:GO:0000239 GO:GO:0007144 GeneTree:ENSGT00390000017432
RefSeq:XP_851775.1 ProteinModelPortal:E2R222
Ensembl:ENSCAFT00000017241 GeneID:609426 KEGG:cfa:609426 CTD:9319
OMA:TEKIDMA NextBio:20895024 Uniprot:E2R222
Length = 432
Score = 476 (172.6 bits), Expect = 2.7e-45, P = 2.7e-45
Identities = 91/131 (69%), Positives = 113/131 (86%)
Query: 3 FSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLF 62
FS V SN+I+WNRVVLLHGPPGTGKTSLCKA+AQKL+IRL S+Y+ + IEINSHSLF
Sbjct: 159 FSDKNVDSNLIAWNRVVLLHGPPGTGKTSLCKALAQKLTIRLSSRYQYGQLIEINSHSLF 218
Query: 63 SKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVN 122
SK+FSESGKLV KMF KI++ ++ +++LV +LIDE+ESLT AR + +GTEPSD +RVVN
Sbjct: 219 SKWFSESGKLVTKMFQKIQDLIDDKDALVFVLIDEVESLTAARNACRAGTEPSDAIRVVN 278
Query: 123 AVLTQIDQLKK 133
AVLTQIDQ+K+
Sbjct: 279 AVLTQIDQIKR 289
Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 37/97 (38%), Positives = 52/97 (53%)
Query: 87 EESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKKKSTGLSGRTLRKI 146
EE + C +I + L RE M G ++ V ++ +L++I +KS GLSGR LRK+
Sbjct: 336 EELMKCQIIYPRQQLLTLRELEMIGFIENN-VSKLSLLLSEIS---RKSEGLSGRVLRKL 391
Query: 147 PFLTFVKYISNNSVSMENFLIALEKTVLDLLVEEKSL 183
PFL YI +V++E FL AL V E K L
Sbjct: 392 PFLAHALYIQAPTVTIEGFLQALSLAVDKQFEERKKL 428
>UNIPROTKB|F1N3B9 [details] [associations]
symbol:TRIP13 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042802 "identical protein binding" evidence=IEA]
[GO:0007286 "spermatid development" evidence=IEA] [GO:0007144
"female meiosis I" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007131 "reciprocal meiotic recombination"
evidence=IEA] [GO:0007130 "synaptonemal complex assembly"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0001673 "male germ cell nucleus" evidence=IEA]
[GO:0001556 "oocyte maturation" evidence=IEA] [GO:0000239
"pachytene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0007286 GO:GO:0001673
GO:GO:0006302 GO:GO:0017111 GO:GO:0001556 GO:GO:0007131
GO:GO:0007130 GO:GO:0007141 GO:GO:0000239 GO:GO:0007144
GeneTree:ENSGT00390000017432 CTD:9319 OMA:TEKIDMA EMBL:DAAA02051455
IPI:IPI00842519 RefSeq:XP_002696498.1 RefSeq:XP_002705648.1
UniGene:Bt.26855 Ensembl:ENSBTAT00000048744 GeneID:506746
KEGG:bta:506746 NextBio:20867736 Uniprot:F1N3B9
Length = 432
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 89/133 (66%), Positives = 114/133 (85%)
Query: 3 FSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLF 62
FS V SN+I+WNRVVLLHGPPGTGKTSLCKA+AQKL+IRL S+Y+ + +EINSHSLF
Sbjct: 159 FSDKNVDSNLITWNRVVLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLVEINSHSLF 218
Query: 63 SKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVN 122
SK+FSESGKLV +MF KI++ ++ +++LV +LIDE+ESLT +R + +GTEPSD +RVVN
Sbjct: 219 SKWFSESGKLVTRMFQKIQDLIDDKDALVFVLIDEVESLTASRNACRAGTEPSDAIRVVN 278
Query: 123 AVLTQIDQLKKKS 135
AVLTQIDQ+K+ S
Sbjct: 279 AVLTQIDQIKRHS 291
Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 37/97 (38%), Positives = 52/97 (53%)
Query: 87 EESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKKKSTGLSGRTLRKI 146
EE + C +I + L RE M G ++ V ++ +L++I +KS GLSGR LRK+
Sbjct: 336 EELMRCQIIYPRQQLLTLRELEMIGFIENN-VSKLSLLLSEIS---RKSEGLSGRVLRKL 391
Query: 147 PFLTFVKYISNNSVSMENFLIALEKTVLDLLVEEKSL 183
PFL YI +V++E FL AL V E K L
Sbjct: 392 PFLAHALYIQAPTVTIEGFLQALSLAVEKQFEERKKL 428
>UNIPROTKB|Q6P4W8 [details] [associations]
symbol:trip13 "Pachytene checkpoint protein 2 homolog"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0007130
"synaptonemal complex assembly" evidence=ISS] [GO:0007131
"reciprocal meiotic recombination" evidence=ISS] [GO:0007283
"spermatogenesis" evidence=ISS] [GO:0048477 "oogenesis"
evidence=ISS] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0030154
GO:GO:0048477 GO:GO:0007283 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0007131 GO:GO:0007130
GeneTree:ENSGT00390000017432 HOGENOM:HOG000234557 CTD:9319
HOVERGEN:HBG052830 OrthoDB:EOG4STS4K EMBL:BC063217
RefSeq:NP_989228.1 UniGene:Str.839 ProteinModelPortal:Q6P4W8
STRING:Q6P4W8 Ensembl:ENSXETT00000028696 GeneID:394836
KEGG:xtr:394836 Xenbase:XB-GENE-974898 InParanoid:Q6P4W8
OMA:CKGLAQK Bgee:Q6P4W8 Uniprot:Q6P4W8
Length = 432
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 92/133 (69%), Positives = 111/133 (83%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
M FS V SN+ISWNRVVLLHGPPGTGKTSLCKA+AQKL+IRL +Y+ + +EINSHS
Sbjct: 157 MLFSDKNVDSNLISWNRVVLLHGPPGTGKTSLCKALAQKLTIRLSYRYRYGQLVEINSHS 216
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRV 120
LFSK+FSESGKLV KMF KI E + +E+LV +LIDE+ESLT AR++ +GTEPSD +RV
Sbjct: 217 LFSKWFSESGKLVTKMFQKIHELINDKEALVFVLIDEVESLTAARKASRAGTEPSDAIRV 276
Query: 121 VNAVLTQIDQLKK 133
VNAVLTQID +K+
Sbjct: 277 VNAVLTQIDHIKR 289
Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 31/96 (32%), Positives = 54/96 (56%)
Query: 87 EESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKKKSTGLSGRTLRKI 146
EE + C +I + L R+ + G ++ ++ + Q++++ +KS GLSGR LRK+
Sbjct: 336 EELMKCQIIYPKQQLLTLRDLEIIGFLENN----ISKLSLQLNEISRKSEGLSGRVLRKL 391
Query: 147 PFLTFVKYISNNSVSMENFLIALEKTVLDLLVEEKS 182
PFL Y+ + +V++E FL AL V + E K+
Sbjct: 392 PFLAHALYLQSPTVTIERFLWALSLAVDEQFQERKN 427
>UNIPROTKB|D3K5L7 [details] [associations]
symbol:TRIP13 "Pachytene checkpoint protein 2 homolog"
species:9823 "Sus scrofa" [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0007130 "synaptonemal complex assembly"
evidence=ISS] [GO:0007131 "reciprocal meiotic recombination"
evidence=ISS] [GO:0007283 "spermatogenesis" evidence=ISS]
[GO:0048477 "oogenesis" evidence=ISS] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR001270 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 GO:GO:0005524 GO:GO:0030154
GO:GO:0048477 GO:GO:0007283 GO:GO:0006302 GO:GO:0017111
GO:GO:0007131 GO:GO:0007130 CTD:9319 EMBL:GU373695
RefSeq:NP_001182300.1 UniGene:Ssc.848 GeneID:100337674
KEGG:ssc:100337674 Uniprot:D3K5L7
Length = 431
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 90/133 (67%), Positives = 113/133 (84%)
Query: 3 FSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLF 62
FS V SN+I+WNRVVLLHGPPGTGKTSLCKA+AQKL+IRL S+Y+ + IEINSHSLF
Sbjct: 159 FSDKNVDSNLITWNRVVLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLF 218
Query: 63 SKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVN 122
SK+FSESGKLV +MF I++ ++ +++LV +LIDE+ESLT AR + +GTEPSD +RVVN
Sbjct: 219 SKWFSESGKLVTRMFQMIQDLIDDKDALVFVLIDEVESLTAARNACRAGTEPSDAIRVVN 278
Query: 123 AVLTQIDQLKKKS 135
AVLTQIDQ+K+ S
Sbjct: 279 AVLTQIDQIKRHS 291
Score = 122 (48.0 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 36/95 (37%), Positives = 53/95 (55%)
Query: 87 EESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKKKSTGLSGRTLRKI 146
EE + C +I + L RE M G ++ V ++ +L++I +KS GLSGR LRK+
Sbjct: 336 EELMKCQIIYPRQQLLTLRELEMIGFIENN-VSKLSLLLSEIS---RKSEGLSGRVLRKL 391
Query: 147 PFLTFVKYISNNSVSMENFLIALEKTVLDLLVEEK 181
PFL YI +V++E FL AL V D E++
Sbjct: 392 PFLAHALYIQAPTVTIEGFLQALSLAV-DRQFEDR 425
>WB|WBGene00008641 [details] [associations]
symbol:pch-2 species:6239 "Caenorhabditis elegans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0007126 "meiosis"
evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0007126
GO:GO:0006915 EMBL:Z48334 eggNOG:COG0464 GO:GO:0017111 PIR:T20692
RefSeq:NP_495711.1 ProteinModelPortal:Q09535 SMR:Q09535
DIP:DIP-26661N MINT:MINT-1054495 STRING:Q09535 PaxDb:Q09535
EnsemblMetazoa:F10B5.5 GeneID:174313 KEGG:cel:CELE_F10B5.5
UCSC:F10B5.5 CTD:174313 WormBase:F10B5.5
GeneTree:ENSGT00390000017432 HOGENOM:HOG000234557 InParanoid:Q09535
OMA:SEKHVNT NextBio:883480 Uniprot:Q09535
Length = 424
Score = 401 (146.2 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 80/137 (58%), Positives = 104/137 (75%)
Query: 2 KFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSL 61
+ S V + II+ NR++LL GPPGTGKTSLCK +AQ LSIR+ KY + +EINSHSL
Sbjct: 158 RLSEKHVNTKIINVNRLILLTGPPGTGKTSLCKGLAQHLSIRMNDKYSKSVMLEINSHSL 217
Query: 62 FSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVV 121
FSK+FSESGKLVQKMF++I E E E+ +V +LIDE+ESL RES S +EPSD +R V
Sbjct: 218 FSKWFSESGKLVQKMFDQIDELAEDEKCMVFVLIDEVESLGMCRESSSSRSEPSDAIRAV 277
Query: 122 NAVLTQIDQLKKKSTGL 138
NA+LTQID+++++ L
Sbjct: 278 NALLTQIDRIRRRDNVL 294
Score = 46 (21.3 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 8/24 (33%), Positives = 16/24 (66%)
Query: 130 QLKKKSTGLSGRTLRKIPFLTFVK 153
++ +++ GLSGR + +P L + K
Sbjct: 374 KIAQEARGLSGRAISMLPTLVYSK 397
>DICTYBASE|DDB_G0279111 [details] [associations]
symbol:DDB_G0279111 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001270
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PRINTS:PR00300 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0279111 GO:GO:0005524 EMBL:AAFI02000027
eggNOG:COG0464 GO:GO:0017111 RefSeq:XP_641871.1
ProteinModelPortal:Q54X96 STRING:Q54X96 EnsemblProtists:DDB0235187
GeneID:8621877 KEGG:ddi:DDB_G0279111 InParanoid:Q54X96 OMA:LIEINTH
Uniprot:Q54X96
Length = 373
Score = 413 (150.4 bits), Expect = 1.3e-38, P = 1.3e-38
Identities = 86/153 (56%), Positives = 113/153 (73%)
Query: 3 FSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLF 62
FS ++ SNI+S N+V+ L+GPPGTGKTSL KA+AQ++SI + +Y+ ++ IEIN+HSLF
Sbjct: 195 FSKFRIDSNIVSNNKVIFLYGPPGTGKTSLAKALAQRISIVYRDRYQFSQLIEINTHSLF 254
Query: 63 SKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMS-GTEPSDGVRVV 121
SK+FSESGKLV KMF IKE +E + V +LIDE+ESL AR S ++ GTEPSD +RVV
Sbjct: 255 SKWFSESGKLVMKMFENIKELLEDQNCFVMILIDEVESLAAARSSAINNGTEPSDSIRVV 314
Query: 122 NAVLTQIDQLKKKSTGLSGRT--LRKIPFLTFV 152
NA LTQ+DQLK+ S L T + K L F+
Sbjct: 315 NAFLTQLDQLKQYSNVLVVATSNITKAVDLAFI 347
>UNIPROTKB|H0YAL2 [details] [associations]
symbol:TRIP13 "Pachytene checkpoint protein 2 homolog"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003959 Pfam:PF00004 GO:GO:0005524 EMBL:AC122719
HGNC:HGNC:12307 Ensembl:ENST00000513435 Uniprot:H0YAL2
Length = 249
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 66/95 (69%), Positives = 82/95 (86%)
Query: 3 FSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLF 62
FS V SN+I+WNRVVLLHGPPGTGKTSLCKA+AQKL+IRL S+Y+ + IEINSHSLF
Sbjct: 155 FSDKNVNSNLITWNRVVLLHGPPGTGKTSLCKALAQKLTIRLSSRYRYGQLIEINSHSLF 214
Query: 63 SKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDE 97
SK+FSESGKLV KMF KI++ ++ +++LV +LIDE
Sbjct: 215 SKWFSESGKLVTKMFQKIQDLIDDKDALVFVLIDE 249
>SGD|S000000390 [details] [associations]
symbol:PCH2 "Nucleolar component of the pachytene checkpoint,
which prevents chrom" species:4932 "Saccharomyces cerevisiae"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0007131 "reciprocal meiotic recombination" evidence=IMP]
[GO:0016887 "ATPase activity" evidence=ISA] [GO:0051598 "meiotic
recombination checkpoint" evidence=IMP] [GO:0042138 "meiotic DNA
double-strand break formation" evidence=IGI;IMP] [GO:0005634
"nucleus" evidence=IEA] [GO:0007126 "meiosis" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
SGD:S000000390 GO:GO:0005524 GO:GO:0005694 GO:GO:0005730
EMBL:BK006936 GO:GO:0016887 eggNOG:COG0464 GO:GO:0007131
GO:GO:0051598 GO:GO:0042138 EMBL:U02073
GeneTree:ENSGT00390000017432 EMBL:Z36055 PIR:S46058
RefSeq:NP_009745.2 ProteinModelPortal:P38126 SMR:P38126
DIP:DIP-4661N IntAct:P38126 MINT:MINT-559572 STRING:P38126
EnsemblFungi:YBR186W GeneID:852484 KEGG:sce:YBR186W CYGD:YBR186w
HOGENOM:HOG000115471 OMA:ESGHERT OrthoDB:EOG4897WN NextBio:971462
Genevestigator:P38126 GermOnline:YBR186W Uniprot:P38126
Length = 564
Score = 282 (104.3 bits), Expect = 5.2e-24, P = 5.2e-24
Identities = 59/136 (43%), Positives = 92/136 (67%)
Query: 10 SNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIR---------LQSKYKITEFIEINSHS 60
+ +I+ N+++L+HGPPGTGKT+LCKA+ QKLS+R + + YK IE++
Sbjct: 301 TTLITNNKLLLVHGPPGTGKTTLCKALCQKLSVRREFSDGSDTIDTNYKGI-IIELSCAR 359
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEES---LVCLLIDEIESLTRARESVMSGTEPSDG 117
+FSK+F ES K + +F I+E ++ E +CLLIDE+E++ +R ++ S E +DG
Sbjct: 360 IFSKWFGESSKNISIVFKDIEELLKVNEGRGIFICLLIDEVEAIASSRTNLSSRNESTDG 419
Query: 118 VRVVNAVLTQIDQLKK 133
+RVVN +LTQ+D+LKK
Sbjct: 420 IRVVNTLLTQLDRLKK 435
>UNIPROTKB|K7EM02 [details] [associations]
symbol:KATNAL2 "Katanin p60 ATPase-containing subunit
A-like 2" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 EMBL:AC090373 EMBL:AC012254
HGNC:HGNC:25387 Ensembl:ENST00000586198 Uniprot:K7EM02
Length = 128
Score = 139 (54.0 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 43/125 (34%), Positives = 67/125 (53%)
Query: 10 SNIIS-WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSE 68
+ I+S W + +LL+GPPGTGKT L KAVA + T F I++ ++ SK+ +
Sbjct: 5 TGILSPW-KGLLLYGPPGTGKTLLAKAVATECK---------TTFFNISASTIVSKWRGD 54
Query: 69 SGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQI 128
S KLV+ +F E Y + +DE+ES+ R + SG E +R+ +L Q+
Sbjct: 55 SEKLVRVLF----ELARYHAPST-IFLDELESVMSQRGTA-SGGEHEGSLRMKTELLVQM 108
Query: 129 DQLKK 133
D L +
Sbjct: 109 DGLAR 113
>UNIPROTKB|G4N517 [details] [associations]
symbol:MGG_05193 "Cell division control protein 48"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0051301 EMBL:CM001233 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043581 KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
RefSeq:XP_003712735.1 ProteinModelPortal:G4N517 SMR:G4N517
EnsemblFungi:MGG_05193T0 GeneID:2675720 KEGG:mgr:MGG_05193
Uniprot:G4N517
Length = 820
Score = 160 (61.4 bits), Expect = 5.8e-09, P = 5.8e-09
Identities = 49/135 (36%), Positives = 74/135 (54%)
Query: 13 ISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKL 72
+S +R VL +GPPGTGKT L KAVA + + FI + L S +F ES
Sbjct: 527 LSPSRGVLFYGPPGTGKTMLAKAVANECA---------ANFISVKGPELLSMWFGESESN 577
Query: 73 VQKMFNKIKEAVEYEESLVCLL-IDEIESLTRARE-SVMSGTEPSDGVRVVNAVLTQIDQ 130
++ +F+K + A C++ +DE++S+ +AR SV SD RVVN +LT++D
Sbjct: 578 IRDIFDKARAAAP------CIVFLDELDSIAKARGGSVGDAGGASD--RVVNQLLTEMDG 629
Query: 131 L-KKKSTGLSGRTLR 144
+ KK+ + G T R
Sbjct: 630 MTSKKNVFVIGATNR 644
>DICTYBASE|DDB_G0288065 [details] [associations]
symbol:cdcD "CDC48 family AAA ATPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0009617 "response to bacterium" evidence=IEP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0007049 "cell
cycle" evidence=ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005829 "cytosol" evidence=ISS]
[GO:0051301 "cell division" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
dictyBase:DDB_G0288065 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005615 GO:GO:0045335 GO:GO:0009617 GO:GO:0051301
GenomeReviews:CM000154_GR GO:GO:0016887 GO:GO:0007049 GO:GO:0030433
HSSP:Q01853 eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 EMBL:AAFI02000109 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
ProtClustDB:CLSZ2429060 EMBL:U83085 RefSeq:XP_636910.1
ProteinModelPortal:P90532 SMR:P90532 STRING:P90532 PRIDE:P90532
EnsemblProtists:DDB0191154 GeneID:8626465 KEGG:ddi:DDB_G0288065
InParanoid:P90532 Uniprot:P90532
Length = 793
Score = 159 (61.0 bits), Expect = 7.2e-09, P = 7.2e-09
Identities = 45/128 (35%), Positives = 68/128 (53%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VL +GPPG GKT L KA+A + FI I L + +F ES V+++F+
Sbjct: 512 VLFYGPPGCGKTLLAKAIANECQ---------ANFISIKGPELLTMWFGESEANVRELFD 562
Query: 79 KIKEAVEYEESLVCLLI-DEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLK-KKST 136
K ++A C+L DE++S+ R+R S G G RV+N +LT++D + KK+
Sbjct: 563 KARQAAP------CVLFFDELDSIARSRGS-SQGDAGGAGDRVINQILTEMDGMNAKKNV 615
Query: 137 GLSGRTLR 144
+ G T R
Sbjct: 616 FIIGATNR 623
>POMBASE|SPAC1565.08 [details] [associations]
symbol:cdc48 "AAA family ATPase Cdc48" species:4896
"Schizosaccharomyces pombe" [GO:0000790 "nuclear chromatin"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=ISO] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=IGI] [GO:0006906 "vesicle fusion"
evidence=ISO] [GO:0016887 "ATPase activity" evidence=ISM]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISS] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IGI] [GO:0033554 "cellular response to
stress" evidence=IGI] [GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase
complex" evidence=ISO] [GO:0051230 "spindle disassembly"
evidence=TAS] [GO:0061166 "establishment of endoplasmic reticulum
localization involved in endoplasmic reticulum polarization at cell
division site" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 PomBase:SPAC1565.08 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0033554 GO:GO:0016887 GO:GO:0000790 GO:GO:0030433
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0006906 GO:GO:0033047 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0061166
OrthoDB:EOG47H8Z3 RefSeq:NP_593287.2 ProteinModelPortal:Q9P3A7
SMR:Q9P3A7 IntAct:Q9P3A7 STRING:Q9P3A7 PRIDE:Q9P3A7
EnsemblFungi:SPAC1565.08.1 GeneID:2542744 KEGG:spo:SPAC1565.08
OMA:IVTIHPC NextBio:20803789 GO:GO:0034098 GO:GO:0030970
GO:GO:0051230 Uniprot:Q9P3A7
Length = 815
Score = 157 (60.3 bits), Expect = 1.3e-08, P = 1.3e-08
Identities = 46/128 (35%), Positives = 69/128 (53%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VL GPPGTGKT L KA+A + S FI + L S +F ES V+ +F+
Sbjct: 534 VLFFGPPGTGKTLLAKAIANECS---------ANFISVKGPELLSMWFGESESNVRDIFD 584
Query: 79 KIKEAVEYEESLVCLL-IDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLK-KKST 136
K + A C++ +DE++S+ +AR + S + G RVVN +LT++D + KK+
Sbjct: 585 KARAAAP------CVVFLDELDSIAKARGA--SAGDSGGGDRVVNQLLTEMDGVNSKKNV 636
Query: 137 GLSGRTLR 144
+ G T R
Sbjct: 637 FVIGATNR 644
>ASPGD|ASPL0000069340 [details] [associations]
symbol:AN7254 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEP]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0051228
"mitotic spindle disassembly" evidence=IEA] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0043130 "ubiquitin
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0034098 "Cdc48p-Npl4p-Ufd1p
AAA ATPase complex" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0006950 GO:GO:0015031 GO:GO:0007049 EMBL:BN001304 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AACD01000124 RefSeq:XP_680523.1
STRING:Q5AWS6 PRIDE:Q5AWS6 GeneID:2869922 KEGG:ani:AN7254.2
OrthoDB:EOG47H8Z3 Uniprot:Q5AWS6
Length = 823
Score = 156 (60.0 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 48/135 (35%), Positives = 74/135 (54%)
Query: 13 ISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKL 72
+S +R VL +GPPGTGKT L KAVA + + FI + L S +F ES
Sbjct: 530 LSPSRGVLFYGPPGTGKTMLAKAVANECA---------ANFISVKGPELLSMWFGESESN 580
Query: 73 VQKMFNKIKEAVEYEESLVCLL-IDEIESLTRARE-SVMSGTEPSDGVRVVNAVLTQIDQ 130
++ +F+K + A C++ +DE++S+ ++R SV SD RVVN +LT++D
Sbjct: 581 IRDIFDKARAAAP------CVVFLDELDSIAKSRGGSVGDAGGASD--RVVNQLLTEMDG 632
Query: 131 L-KKKSTGLSGRTLR 144
+ KK+ + G T R
Sbjct: 633 MTSKKNVFVIGATNR 647
>CGD|CAL0002187 [details] [associations]
symbol:orf19.6432 species:5476 "Candida albicans" [GO:0005829
"cytosol" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0042493 "response to drug"
evidence=IEA] [GO:0042273 "ribosomal large subunit biogenesis"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
CGD:CAL0002187 GO:GO:0005524 EMBL:AACQ01000073 EMBL:AACQ01000072
eggNOG:COG0464 KO:K14575 GO:GO:0017111 InterPro:IPR009010
SUPFAM:SSF50692 SMART:SM01073 RefSeq:XP_716187.1 RefSeq:XP_716270.1
ProteinModelPortal:Q5A331 GeneID:3642106 GeneID:3642160
KEGG:cal:CaO19.13790 KEGG:cal:CaO19.6432 Uniprot:Q5A331
Length = 766
Score = 154 (59.3 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 45/117 (38%), Positives = 67/117 (57%)
Query: 13 ISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKL 72
IS R +LLHGPPGTGKT L + VA ++ + +T IN S+ SKY E+
Sbjct: 260 ISPPRGILLHGPPGTGKTMLLRCVANSIT----EAHVLT----INGPSIVSKYLGETENA 311
Query: 73 VQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
++ +FN EA +++ S++ +DEI+S+ +R S SG S RVV +LT +D
Sbjct: 312 IRDIFN---EAKKFQPSII--FMDEIDSIAPSRTSDDSGETES---RVVAQLLTVMD 360
>SGD|S000002284 [details] [associations]
symbol:CDC48 "AAA ATPase involved in multiple processes"
species:4932 "Saccharomyces cerevisiae" [GO:0005829 "cytosol"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030433 "ER-associated protein catabolic process"
evidence=IMP] [GO:0000837 "Doa10p ubiquitin ligase complex"
evidence=IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IEA] [GO:1900182 "positive regulation of
protein localization to nucleus" evidence=IMP] [GO:0051228 "mitotic
spindle disassembly" evidence=IMP] [GO:0016320 "endoplasmic
reticulum membrane fusion" evidence=IMP] [GO:0034517 "ribophagy"
evidence=IMP] [GO:0071712 "ER-associated misfolded protein
catabolic process" evidence=IMP] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IMP] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IDA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0043130 "ubiquitin binding" evidence=IDA]
[GO:0036266 "Cdc48p-Npl4p-Vms1p AAA ATPase complex" evidence=IDA]
[GO:0071630 "nucleus-associated proteasomal ubiquitin-dependent
protein catabolic process" evidence=IMP] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IMP] [GO:0016236
"macroautophagy" evidence=IMP] [GO:0031134 "sister chromatid
biorientation" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0072671 "mitochondria-associated protein
catabolic process" evidence=IMP] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000002284 Pfam:PF02359
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0043332
EMBL:BK006938 GO:GO:0016887 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0016236 GO:GO:0031134
GO:GO:0043130 GO:GO:0034727 GO:GO:0016320 GO:GO:0034517
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OrthoDB:EOG47H8Z3 GO:GO:0034098 GO:GO:0030970
EMBL:X56956 EMBL:Z74174 PIR:S67669 RefSeq:NP_010157.1
ProteinModelPortal:P25694 SMR:P25694 DIP:DIP-2704N IntAct:P25694
MINT:MINT-547129 STRING:P25694 TCDB:3.A.16.1.2 PaxDb:P25694
PeptideAtlas:P25694 PRIDE:P25694 EnsemblFungi:YDL126C GeneID:851431
KEGG:sce:YDL126C CYGD:YDL126c GeneTree:ENSGT00700000104534
OMA:TIPRITW NextBio:968654 Genevestigator:P25694 GermOnline:YDL126C
GO:GO:0036266 GO:GO:0000837 GO:GO:0071629 GO:GO:0071712
GO:GO:0072671 GO:GO:0051228 GO:GO:0071630 GO:GO:1900182
Uniprot:P25694
Length = 835
Score = 154 (59.3 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 44/133 (33%), Positives = 71/133 (53%)
Query: 13 ISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKL 72
+S ++ VL +GPPGTGKT L KAVA ++S FI + L S ++ ES
Sbjct: 518 LSPSKGVLFYGPPGTGKTLLAKAVATEVS---------ANFISVKGPELLSMWYGESESN 568
Query: 73 VQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLK 132
++ +F+K + A + +DE++S+ +AR + G RVVN +LT++D +
Sbjct: 569 IRDIFDKARAAAP-----TVVFLDELDSIAKARGGSL-GDAGGASDRVVNQLLTEMDGMN 622
Query: 133 -KKSTGLSGRTLR 144
KK+ + G T R
Sbjct: 623 AKKNVFVIGATNR 635
>UNIPROTKB|E1BYT2 [details] [associations]
symbol:E1BYT2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
GO:GO:0048471 GO:GO:0017111 GeneTree:ENSGT00550000074466
EMBL:AADN02046391 EMBL:AADN02054166 IPI:IPI00573772
Ensembl:ENSGALT00000038786 Uniprot:E1BYT2
Length = 170
Score = 129 (50.5 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 41/135 (30%), Positives = 69/135 (51%)
Query: 15 WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQ 74
W R +LL GPPGTGK+ L KAVA + + + F ++S L SK+ ES KLV+
Sbjct: 34 W-RGILLFGPPGTGKSYLAKAVATEANN--------STFFSVSSSDLMSKWLGESEKLVK 84
Query: 75 KMFNKIKEAVEYEESLVCLLIDEIESLTRAR-ESVMSGTEPSDGVRVVNAVLTQIDQLKK 133
+F ++ ++ S++ IDE++SL +R E+ P+ + + +
Sbjct: 85 NLFELARQ---HKPSII--FIDEVDSLCGSRNENESEAAVPNGFICSSQPNPSHFSTRQG 139
Query: 134 KS-TGLSGRTLRKIP 147
+ L+G TL ++P
Sbjct: 140 RGHAALAGPTLTEVP 154
>UNIPROTKB|H9KYT1 [details] [associations]
symbol:LOC430766 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336
PANTHER:PTHR23077:SF18 GeneTree:ENSGT00700000104534
EMBL:AADN02071262 Ensembl:ENSGALT00000000527 OMA:NRRTHAK
Uniprot:H9KYT1
Length = 538
Score = 150 (57.9 bits), Expect = 4.9e-08, P = 4.9e-08
Identities = 44/129 (34%), Positives = 70/129 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VL +GPPG GKT L KA+A + FI I L + +F ES V+++F+
Sbjct: 246 VLFYGPPGCGKTLLAKAIANECQ---------ANFISIKGPELLTMWFGESEANVREIFD 296
Query: 79 KIKEAVEYEESLVCLLI-DEIESLTRARE-SVMSGTEPSDGVRVVNAVLTQIDQLK-KKS 135
K ++A C+L DE++S+ +AR ++ G +D RV+N +LT++D + KK+
Sbjct: 297 KARQAAP------CVLFFDELDSIAKARGGNIGDGGGAAD--RVINQILTEMDGMSTKKN 348
Query: 136 TGLSGRTLR 144
+ G T R
Sbjct: 349 VFIIGATNR 357
>WB|WBGene00007352 [details] [associations]
symbol:cdc-48.1 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040002
"collagen and cuticulin-based cuticle development" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0002119
GO:GO:0040011 GO:GO:0040018 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 GO:GO:0040002
HOGENOM:HOG000223224 KO:K13525 OMA:QIANECH InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0034098 GeneTree:ENSGT00700000104534
GO:GO:0071712 EMBL:Z49886 PIR:T18970 RefSeq:NP_496273.1
ProteinModelPortal:P54811 SMR:P54811 DIP:DIP-26650N IntAct:P54811
MINT:MINT-1061999 STRING:P54811 PaxDb:P54811 PRIDE:P54811
EnsemblMetazoa:C06A1.1.1 EnsemblMetazoa:C06A1.1.2 GeneID:174624
KEGG:cel:CELE_C06A1.1 UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1
InParanoid:P54811 NextBio:884814 Uniprot:P54811
Length = 809
Score = 152 (58.6 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 45/131 (34%), Positives = 66/131 (50%)
Query: 16 NRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQK 75
+R VL +GPPG GKT L KA+A + FI I L + +F ES V+
Sbjct: 517 SRGVLFYGPPGCGKTLLAKAIANECQ---------ANFISIKGPELLTMWFGESEANVRD 567
Query: 76 MFNKIKEAVEYEESLVCLLI-DEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLK-K 133
+F+K + A C+L DE++S+ +AR G RV+N VLT++D + K
Sbjct: 568 VFDKARAAAP------CVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAK 621
Query: 134 KSTGLSGRTLR 144
K+ + G T R
Sbjct: 622 KNVFIIGATNR 632
>UNIPROTKB|P54811 [details] [associations]
symbol:cdc-48.1 "Transitional endoplasmic reticulum ATPase
homolog 1" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0007126 GO:GO:0002119 GO:GO:0040011 GO:GO:0040018
GO:GO:0016887 GO:GO:0000910 eggNOG:COG0464 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0030968 GO:GO:0040002 HOGENOM:HOG000223224 KO:K13525
OMA:QIANECH InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z49886 PIR:T18970
RefSeq:NP_496273.1 ProteinModelPortal:P54811 SMR:P54811
DIP:DIP-26650N IntAct:P54811 MINT:MINT-1061999 STRING:P54811
PaxDb:P54811 PRIDE:P54811 EnsemblMetazoa:C06A1.1.1
EnsemblMetazoa:C06A1.1.2 GeneID:174624 KEGG:cel:CELE_C06A1.1
UCSC:C06A1.1.1 CTD:174624 WormBase:C06A1.1 InParanoid:P54811
NextBio:884814 Uniprot:P54811
Length = 809
Score = 152 (58.6 bits), Expect = 5.1e-08, P = 5.1e-08
Identities = 45/131 (34%), Positives = 66/131 (50%)
Query: 16 NRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQK 75
+R VL +GPPG GKT L KA+A + FI I L + +F ES V+
Sbjct: 517 SRGVLFYGPPGCGKTLLAKAIANECQ---------ANFISIKGPELLTMWFGESEANVRD 567
Query: 76 MFNKIKEAVEYEESLVCLLI-DEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLK-K 133
+F+K + A C+L DE++S+ +AR G RV+N VLT++D + K
Sbjct: 568 VFDKARAAAP------CVLFFDELDSIAKARGGGAGGDGGGASDRVINQVLTEMDGMNAK 621
Query: 134 KSTGLSGRTLR 144
K+ + G T R
Sbjct: 622 KNVFIIGATNR 632
>ZFIN|ZDB-GENE-030131-5408 [details] [associations]
symbol:vcp "valosin containing protein"
species:7955 "Danio rerio" [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA;ISS] [GO:0016567 "protein
ubiquitination" evidence=ISS] [GO:0035861 "site of double-strand
break" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0009790 "embryo development" evidence=IMP]
[GO:2000058 "regulation of protein ubiquitination involved in
ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0008289 "lipid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359
ZFIN:ZDB-GENE-030131-5408 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0006810 EMBL:CR318632 GO:GO:0016567 GO:GO:0007049
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK GeneTree:ENSGT00700000104534
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:AB093594 EMBL:AY576993 EMBL:BC050488 EMBL:BC067384
IPI:IPI00505091 RefSeq:NP_958889.1 UniGene:Dr.75122
ProteinModelPortal:Q7ZU99 SMR:Q7ZU99 STRING:Q7ZU99 PRIDE:Q7ZU99
Ensembl:ENSDART00000023779 GeneID:327197 KEGG:dre:327197
InParanoid:Q76KA4 NextBio:20809924 Bgee:Q7ZU99 Uniprot:Q7ZU99
Length = 806
Score = 151 (58.2 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 45/129 (34%), Positives = 70/129 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VL +GPPG GKT L KA+A + FI I L + +F ES V+++F+
Sbjct: 514 VLFYGPPGCGKTLLAKAIANECQ---------ANFISIKGPELLTMWFGESEANVREIFD 564
Query: 79 KIKEAVEYEESLVCLLI-DEIESLTRARE-SVMSGTEPSDGVRVVNAVLTQIDQLK-KKS 135
K ++A C+L DE++S+ +AR +V G +D RV+N +LT++D + KK+
Sbjct: 565 KARQAAP------CVLFFDELDSIAKARGGNVGDGGGAAD--RVINQILTEMDGMSSKKN 616
Query: 136 TGLSGRTLR 144
+ G T R
Sbjct: 617 VFIIGATNR 625
>UNIPROTKB|E1BTS8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00700000104534 EMBL:AADN02060646 EMBL:AADN02060647
EMBL:AADN02060648 EMBL:AADN02060649 EMBL:AADN02060650
EMBL:AADN02060651 EMBL:AADN02060652 EMBL:AADN02060653
IPI:IPI00823321 Ensembl:ENSGALT00000039430 ArrayExpress:E1BTS8
Uniprot:E1BTS8
Length = 804
Score = 150 (57.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 44/129 (34%), Positives = 70/129 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VL +GPPG GKT L KA+A + FI I L + +F ES V+++F+
Sbjct: 512 VLFYGPPGCGKTLLAKAIANECQ---------ANFISIKGPELLTMWFGESEANVREIFD 562
Query: 79 KIKEAVEYEESLVCLLI-DEIESLTRARE-SVMSGTEPSDGVRVVNAVLTQIDQLK-KKS 135
K ++A C+L DE++S+ +AR ++ G +D RV+N +LT++D + KK+
Sbjct: 563 KARQAAP------CVLFFDELDSIAKARGGNIGDGGGAAD--RVINQILTEMDGMSTKKN 614
Query: 136 TGLSGRTLR 144
+ G T R
Sbjct: 615 VFIIGATNR 623
>UNIPROTKB|P23787 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8355 "Xenopus laevis" [GO:0000785 "chromatin" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0006974
"response to DNA damage stimulus" evidence=ISS] [GO:0016567
"protein ubiquitination" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0018279 "protein N-linked glycosylation
via asparagine" evidence=ISS] [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0030433 "ER-associated protein catabolic process"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=IPI]
[GO:0034214 "protein hexamerization" evidence=IDA] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0035101 "FACT
complex" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226 CTD:7415 EMBL:X54240
EMBL:BC046949 PIR:S19738 RefSeq:NP_001095217.1 UniGene:Xl.8775
ProteinModelPortal:P23787 SMR:P23787 PRIDE:P23787 GeneID:380491
KEGG:xla:380491 Xenbase:XB-GENE-969578 Uniprot:P23787
Length = 805
Score = 150 (57.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 44/129 (34%), Positives = 70/129 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VL +GPPG GKT L KA+A + FI I L + +F ES V+++F+
Sbjct: 514 VLFYGPPGCGKTLLAKAIANECQ---------ANFISIKGPELLTMWFGESEANVREIFD 564
Query: 79 KIKEAVEYEESLVCLLI-DEIESLTRARE-SVMSGTEPSDGVRVVNAVLTQIDQLK-KKS 135
K ++A C+L DE++S+ +AR ++ G +D RV+N +LT++D + KK+
Sbjct: 565 KARQAAP------CVLFFDELDSIAKARGGNIGDGGGAAD--RVINQILTEMDGMSIKKN 616
Query: 136 TGLSGRTLR 144
+ G T R
Sbjct: 617 VFIIGATNR 625
>UNIPROTKB|Q6GL04 [details] [associations]
symbol:vcp "Transitional endoplasmic reticulum ATPase"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000785
"chromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006302 "double-strand break repair"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0019985
"translesion synthesis" evidence=ISS] [GO:0030433 "ER-associated
protein catabolic process" evidence=ISS] [GO:0032403 "protein
complex binding" evidence=ISS] [GO:0034214 "protein hexamerization"
evidence=ISS] [GO:0035861 "site of double-strand break"
evidence=ISS] [GO:0035101 "FACT complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0032403 GO:GO:0006810
GO:GO:0000785 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0030433 GO:GO:0006302 HSSP:Q01853 eggNOG:COG0464
GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034214
GO:GO:0035861 GO:GO:0019985 CTD:7415 OrthoDB:EOG45TCMK
EMBL:BC074716 RefSeq:NP_001005677.1 UniGene:Str.1287
ProteinModelPortal:Q6GL04 SMR:Q6GL04 STRING:Q6GL04 PRIDE:Q6GL04
GeneID:448177 KEGG:xtr:448177 Xenbase:XB-GENE-969573
InParanoid:Q6GL04 Uniprot:Q6GL04
Length = 805
Score = 150 (57.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 44/129 (34%), Positives = 70/129 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VL +GPPG GKT L KA+A + FI I L + +F ES V+++F+
Sbjct: 514 VLFYGPPGCGKTLLAKAIANECQ---------ANFISIKGPELLTMWFGESEANVREIFD 564
Query: 79 KIKEAVEYEESLVCLLI-DEIESLTRARE-SVMSGTEPSDGVRVVNAVLTQIDQLK-KKS 135
K ++A C+L DE++S+ +AR ++ G +D RV+N +LT++D + KK+
Sbjct: 565 KARQAAP------CVLFFDELDSIAKARGGNIGDGGGAAD--RVINQILTEMDGMSTKKN 616
Query: 136 TGLSGRTLR 144
+ G T R
Sbjct: 617 VFIIGATNR 625
>UNIPROTKB|G3X757 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0070842 "aggresome assembly"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 UniGene:Bt.49331 EMBL:DAAA02023126
ProteinModelPortal:G3X757 Ensembl:ENSBTAT00000019970 Uniprot:G3X757
Length = 806
Score = 150 (57.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 44/129 (34%), Positives = 70/129 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VL +GPPG GKT L KA+A + FI I L + +F ES V+++F+
Sbjct: 514 VLFYGPPGCGKTLLAKAIANECQ---------ANFISIKGPELLTMWFGESEANVREIFD 564
Query: 79 KIKEAVEYEESLVCLLI-DEIESLTRARE-SVMSGTEPSDGVRVVNAVLTQIDQLK-KKS 135
K ++A C+L DE++S+ +AR ++ G +D RV+N +LT++D + KK+
Sbjct: 565 KARQAAP------CVLFFDELDSIAKARGGNIGDGGGAAD--RVINQILTEMDGMSTKKN 616
Query: 136 TGLSGRTLR 144
+ G T R
Sbjct: 617 VFIIGATNR 625
>UNIPROTKB|Q3ZBT1 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9913 "Bos taurus" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0006302 "double-strand break repair" evidence=ISS] [GO:0035861
"site of double-strand break" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
EMBL:BC103125 IPI:IPI00710727 RefSeq:NP_001029466.1
UniGene:Bt.49331 ProteinModelPortal:Q3ZBT1 SMR:Q3ZBT1 IntAct:Q3ZBT1
STRING:Q3ZBT1 PRIDE:Q3ZBT1 GeneID:507345 KEGG:bta:507345 CTD:7415
InParanoid:Q3ZBT1 OrthoDB:EOG45TCMK NextBio:20868019 Uniprot:Q3ZBT1
Length = 806
Score = 150 (57.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 44/129 (34%), Positives = 70/129 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VL +GPPG GKT L KA+A + FI I L + +F ES V+++F+
Sbjct: 514 VLFYGPPGCGKTLLAKAIANECQ---------ANFISIKGPELLTMWFGESEANVREIFD 564
Query: 79 KIKEAVEYEESLVCLLI-DEIESLTRARE-SVMSGTEPSDGVRVVNAVLTQIDQLK-KKS 135
K ++A C+L DE++S+ +AR ++ G +D RV+N +LT++D + KK+
Sbjct: 565 KARQAAP------CVLFFDELDSIAKARGGNIGDGGGAAD--RVINQILTEMDGMSTKKN 616
Query: 136 TGLSGRTLR 144
+ G T R
Sbjct: 617 VFIIGATNR 625
>UNIPROTKB|P55072 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9606 "Homo sapiens" [GO:0008289 "lipid binding"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0042802 "identical protein
binding" evidence=IEA] [GO:0051260 "protein homooligomerization"
evidence=IEA] [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=ISS] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=ISS]
[GO:0006281 "DNA repair" evidence=NAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005829
"cytosol" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=NAS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IDA] [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP;TAS] [GO:0030968
"endoplasmic reticulum unfolded protein response" evidence=TAS]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0016567 "protein
ubiquitination" evidence=IDA;NAS] [GO:0042981 "regulation of
apoptotic process" evidence=TAS] [GO:0045184 "establishment of
protein localization" evidence=TAS] [GO:0019985 "translesion
synthesis" evidence=IMP] [GO:0035861 "site of double-strand break"
evidence=IDA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IMP] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0019903 "protein phosphatase binding" evidence=IPI] [GO:0045732
"positive regulation of protein catabolic process" evidence=IDA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IDA] [GO:0031593 "polyubiquitin binding" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0031334
GO:GO:0051260 GO:GO:0016887 GO:GO:0016567 GO:GO:0008289
GO:GO:0006919 EMBL:CH471071 GO:GO:0030433 GO:GO:0006302
GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279 GO:GO:0031593
GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 Orphanet:803 PDB:3TIW
PDBsum:3TIW GO:GO:0030968 HOGENOM:HOG000223224 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 TCDB:3.A.16.1.1 GO:GO:0070842 GO:GO:0035861
GO:GO:0019985 EMBL:AC004472 EMBL:AL353795 PDB:3QC8 PDB:3QQ8
PDB:3QWZ PDBsum:3QC8 PDBsum:3QQ8 PDBsum:3QWZ HOVERGEN:HBG001226
PDB:3EBB PDBsum:3EBB CTD:7415 OrthoDB:EOG45TCMK EMBL:AF100752
EMBL:AK312310 EMBL:BC110913 EMBL:BC121794 EMBL:Z70768
IPI:IPI00022774 PIR:T02243 RefSeq:NP_009057.1 UniGene:Hs.529782
PDB:3HU1 PDB:3HU2 PDB:3HU3 PDB:3QQ7 PDBsum:3HU1 PDBsum:3HU2
PDBsum:3HU3 PDBsum:3QQ7 ProteinModelPortal:P55072 SMR:P55072
DIP:DIP-33543N IntAct:P55072 MINT:MINT-272884 STRING:P55072
PhosphoSite:P55072 DMDM:6094447 DOSAC-COBS-2DPAGE:P55072 OGP:P55072
REPRODUCTION-2DPAGE:IPI00022774 REPRODUCTION-2DPAGE:P55072
PaxDb:P55072 PRIDE:P55072 Ensembl:ENST00000358901 GeneID:7415
KEGG:hsa:7415 UCSC:uc003zvy.2 GeneCards:GC09M035056 HGNC:HGNC:12666
HPA:CAB005593 HPA:HPA012728 HPA:HPA012814 MIM:167320 MIM:601023
MIM:613954 neXtProt:NX_P55072 Orphanet:52430 PharmGKB:PA37289
InParanoid:P55072 BindingDB:P55072 ChEMBL:CHEMBL1075145 ChiTaRS:VCP
EvolutionaryTrace:P55072 GenomeRNAi:7415 NextBio:29034
ArrayExpress:P55072 Bgee:P55072 CleanEx:HS_VCP
Genevestigator:P55072 GermOnline:ENSG00000165280 Uniprot:P55072
Length = 806
Score = 150 (57.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 44/129 (34%), Positives = 70/129 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VL +GPPG GKT L KA+A + FI I L + +F ES V+++F+
Sbjct: 514 VLFYGPPGCGKTLLAKAIANECQ---------ANFISIKGPELLTMWFGESEANVREIFD 564
Query: 79 KIKEAVEYEESLVCLLI-DEIESLTRARE-SVMSGTEPSDGVRVVNAVLTQIDQLK-KKS 135
K ++A C+L DE++S+ +AR ++ G +D RV+N +LT++D + KK+
Sbjct: 565 KARQAAP------CVLFFDELDSIAKARGGNIGDGGGAAD--RVINQILTEMDGMSTKKN 616
Query: 136 TGLSGRTLR 144
+ G T R
Sbjct: 617 VFIIGATNR 625
>UNIPROTKB|P03974 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0019985 "translesion synthesis"
evidence=ISS] [GO:0016567 "protein ubiquitination" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0006302
"double-strand break repair" evidence=ISS] [GO:0018279 "protein
N-linked glycosylation via asparagine" evidence=ISS] [GO:0030433
"ER-associated protein catabolic process" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008289
"lipid binding" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005783 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0006810 GO:GO:0016567
GO:GO:0008289 GO:GO:0030433 GO:GO:0006302 eggNOG:COG0464
GO:GO:0017111 GO:GO:0018279 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:M30143 PIR:A26360
RefSeq:NP_999445.1 UniGene:Ssc.856 ProteinModelPortal:P03974
SMR:P03974 STRING:P03974 GeneID:397524 KEGG:ssc:397524
Uniprot:P03974
Length = 806
Score = 150 (57.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 44/129 (34%), Positives = 70/129 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VL +GPPG GKT L KA+A + FI I L + +F ES V+++F+
Sbjct: 514 VLFYGPPGCGKTLLAKAIANECQ---------ANFISIKGPELLTMWFGESEANVREIFD 564
Query: 79 KIKEAVEYEESLVCLLI-DEIESLTRARE-SVMSGTEPSDGVRVVNAVLTQIDQLK-KKS 135
K ++A C+L DE++S+ +AR ++ G +D RV+N +LT++D + KK+
Sbjct: 565 KARQAAP------CVLFFDELDSIAKARGGNIGDGGGAAD--RVINQILTEMDGMSTKKN 616
Query: 136 TGLSGRTLR 144
+ G T R
Sbjct: 617 VFIIGATNR 625
>MGI|MGI:99919 [details] [associations]
symbol:Vcp "valosin containing protein" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=ISO] [GO:0005102
"receptor binding" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=ISO] [GO:0005829
"cytosol" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=ISO] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IGI]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISO] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IDA] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO] [GO:0008289 "lipid binding" evidence=IEA]
[GO:0016567 "protein ubiquitination" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=ISO] [GO:0019903 "protein phosphatase binding"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0019985 "translesion synthesis" evidence=ISO]
[GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
[GO:0030970 "retrograde protein transport, ER to cytosol"
evidence=ISO] [GO:0031334 "positive regulation of protein complex
assembly" evidence=ISO] [GO:0031593 "polyubiquitin binding"
evidence=ISO;IDA] [GO:0032403 "protein complex binding"
evidence=ISO] [GO:0032436 "positive regulation of proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0035861 "site of double-strand break" evidence=ISO] [GO:0042802
"identical protein binding" evidence=ISO] [GO:0043231
"intracellular membrane-bounded organelle" evidence=ISO]
[GO:0043234 "protein complex" evidence=IPI] [GO:0043531 "ADP
binding" evidence=ISO] [GO:0045732 "positive regulation of protein
catabolic process" evidence=ISO] [GO:0051260 "protein
homooligomerization" evidence=ISO] [GO:0070842 "aggresome assembly"
evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 MGI:MGI:99919 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0043234 GO:GO:0031334 GO:GO:0051260 GO:GO:0016887
GO:GO:0016567 GO:GO:0008289 GO:GO:0006919 GO:GO:0030433
GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464 GO:GO:0018279
GO:GO:0031593 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 OMA:AYRPIHK
GO:GO:0030970 GeneTree:ENSGT00700000104534 EMBL:AL672276
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 PDB:2PJH PDBsum:2PJH
PDB:1S3S PDBsum:1S3S HOVERGEN:HBG001226 CTD:7415 OrthoDB:EOG45TCMK
ChiTaRS:VCP EMBL:Z14044 EMBL:AK028264 EMBL:AK030751 EMBL:AK149931
EMBL:AK151109 EMBL:AK151418 EMBL:AK153249 EMBL:AK159177
EMBL:AK159509 EMBL:AK167794 EMBL:AK169140 EMBL:BC043053
EMBL:BC049114 IPI:IPI00622235 PIR:S25197 RefSeq:NP_033529.3
UniGene:Mm.245976 PDB:1E32 PDB:1R7R PDB:3CF0 PDB:3CF1 PDB:3CF2
PDB:3CF3 PDBsum:1E32 PDBsum:1R7R PDBsum:3CF0 PDBsum:3CF1
PDBsum:3CF2 PDBsum:3CF3 DisProt:DP00435 ProteinModelPortal:Q01853
SMR:Q01853 DIP:DIP-29796N IntAct:Q01853 MINT:MINT-220770
STRING:Q01853 PhosphoSite:Q01853 REPRODUCTION-2DPAGE:Q01853
UCD-2DPAGE:Q01853 PaxDb:Q01853 PRIDE:Q01853
Ensembl:ENSMUST00000030164 GeneID:269523 KEGG:mmu:269523
UCSC:uc008sor.2 InParanoid:Q01853 BindingDB:Q01853
EvolutionaryTrace:Q01853 NextBio:392876 Bgee:Q01853 CleanEx:MM_VCP
Genevestigator:Q01853 GermOnline:ENSMUSG00000028452 Uniprot:Q01853
Length = 806
Score = 150 (57.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 44/129 (34%), Positives = 70/129 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VL +GPPG GKT L KA+A + FI I L + +F ES V+++F+
Sbjct: 514 VLFYGPPGCGKTLLAKAIANECQ---------ANFISIKGPELLTMWFGESEANVREIFD 564
Query: 79 KIKEAVEYEESLVCLLI-DEIESLTRARE-SVMSGTEPSDGVRVVNAVLTQIDQLK-KKS 135
K ++A C+L DE++S+ +AR ++ G +D RV+N +LT++D + KK+
Sbjct: 565 KARQAAP------CVLFFDELDSIAKARGGNIGDGGGAAD--RVINQILTEMDGMSTKKN 616
Query: 136 TGLSGRTLR 144
+ G T R
Sbjct: 617 VFIIGATNR 625
>RGD|621595 [details] [associations]
symbol:Vcp "valosin-containing protein" species:10116 "Rattus
norvegicus" [GO:0000502 "proteasome complex" evidence=IEA;ISO]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO;IDA]
[GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200 "ATP catabolic
process" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=IMP] [GO:0006919 "activation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=IEA;ISO] [GO:0006974 "response to DNA damage
stimulus" evidence=ISO;ISS] [GO:0008289 "lipid binding"
evidence=IEA] [GO:0016567 "protein ubiquitination"
evidence=ISO;ISS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0018279 "protein N-linked glycosylation via asparagine"
evidence=ISO;ISS] [GO:0019903 "protein phosphatase binding"
evidence=IEA;ISO] [GO:0019904 "protein domain specific binding"
evidence=IEA;ISO] [GO:0019985 "translesion synthesis"
evidence=ISO;ISS] [GO:0030433 "ER-associated protein catabolic
process" evidence=ISO;ISS] [GO:0030970 "retrograde protein
transport, ER to cytosol" evidence=IEA;ISO] [GO:0031334 "positive
regulation of protein complex assembly" evidence=IEA;ISO]
[GO:0031593 "polyubiquitin binding" evidence=IEA;ISO] [GO:0032403
"protein complex binding" evidence=IPI] [GO:0032436 "positive
regulation of proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISO;IMP] [GO:0035861 "site of double-strand
break" evidence=ISO;ISS] [GO:0042802 "identical protein binding"
evidence=IDA] [GO:0043231 "intracellular membrane-bounded
organelle" evidence=IDA] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043531 "ADP binding" evidence=IMP] [GO:0045732
"positive regulation of protein catabolic process" evidence=ISO]
[GO:0051260 "protein homooligomerization" evidence=IDA] [GO:0070842
"aggresome assembly" evidence=IEA;ISO] [GO:0005730 "nucleolus"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 RGD:621595 Pfam:PF02359
GO:GO:0005783 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0031334 GO:GO:0051260 GO:GO:0005102 GO:GO:0016887
GO:GO:0016567 GO:GO:0042802 GO:GO:0008289 GO:GO:0006919
GO:GO:0030433 GO:GO:0006302 GO:GO:0000502 eggNOG:COG0464
GO:GO:0018279 GO:GO:0006888 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 GO:GO:0035861 GO:GO:0019985 HOVERGEN:HBG001226
CTD:7415 OrthoDB:EOG45TCMK EMBL:U11760 EMBL:BC060518
IPI:IPI00212014 PIR:A55190 RefSeq:NP_446316.1 UniGene:Rn.98891
ProteinModelPortal:P46462 SMR:P46462 IntAct:P46462
MINT:MINT-1954391 STRING:P46462 PhosphoSite:P46462
World-2DPAGE:0004:P46462 PRIDE:P46462 Ensembl:ENSRNOT00000046102
GeneID:116643 KEGG:rno:116643 UCSC:RGD:621595 InParanoid:P46462
NextBio:619375 Genevestigator:P46462 GermOnline:ENSRNOG00000034242
Uniprot:P46462
Length = 806
Score = 150 (57.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 44/129 (34%), Positives = 70/129 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VL +GPPG GKT L KA+A + FI I L + +F ES V+++F+
Sbjct: 514 VLFYGPPGCGKTLLAKAIANECQ---------ANFISIKGPELLTMWFGESEANVREIFD 564
Query: 79 KIKEAVEYEESLVCLLI-DEIESLTRARE-SVMSGTEPSDGVRVVNAVLTQIDQLK-KKS 135
K ++A C+L DE++S+ +AR ++ G +D RV+N +LT++D + KK+
Sbjct: 565 KARQAAP------CVLFFDELDSIAKARGGNIGDGGGAAD--RVINQILTEMDGMSTKKN 616
Query: 136 TGLSGRTLR 144
+ G T R
Sbjct: 617 VFIIGATNR 625
>UNIPROTKB|F1SIH8 [details] [associations]
symbol:VCP "Transitional endoplasmic reticulum ATPase"
species:9823 "Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:FP102396 Ensembl:ENSSSCT00000005837 ArrayExpress:F1SIH8
Uniprot:F1SIH8
Length = 808
Score = 150 (57.9 bits), Expect = 8.8e-08, P = 8.8e-08
Identities = 44/129 (34%), Positives = 70/129 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VL +GPPG GKT L KA+A + FI I L + +F ES V+++F+
Sbjct: 514 VLFYGPPGCGKTLLAKAIANECQ---------ANFISIKGPELLTMWFGESEANVREIFD 564
Query: 79 KIKEAVEYEESLVCLLI-DEIESLTRARE-SVMSGTEPSDGVRVVNAVLTQIDQLK-KKS 135
K ++A C+L DE++S+ +AR ++ G +D RV+N +LT++D + KK+
Sbjct: 565 KARQAAP------CVLFFDELDSIAKARGGNIGDGGGAAD--RVINQILTEMDGMSTKKN 616
Query: 136 TGLSGRTLR 144
+ G T R
Sbjct: 617 VFIIGATNR 625
>UNIPROTKB|F1P4V8 [details] [associations]
symbol:LOC426240 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:DIRRYEE GeneTree:ENSGT00700000104534
EMBL:AADN02060646 EMBL:AADN02060647 EMBL:AADN02060648
EMBL:AADN02060649 EMBL:AADN02060650 EMBL:AADN02060651
EMBL:AADN02060652 EMBL:AADN02060653 IPI:IPI00585183
Ensembl:ENSGALT00000003093 ArrayExpress:F1P4V8 Uniprot:F1P4V8
Length = 810
Score = 150 (57.9 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 44/129 (34%), Positives = 70/129 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VL +GPPG GKT L KA+A + FI I L + +F ES V+++F+
Sbjct: 518 VLFYGPPGCGKTLLAKAIANECQ---------ANFISIKGPELLTMWFGESEANVREIFD 568
Query: 79 KIKEAVEYEESLVCLLI-DEIESLTRARE-SVMSGTEPSDGVRVVNAVLTQIDQLK-KKS 135
K ++A C+L DE++S+ +AR ++ G +D RV+N +LT++D + KK+
Sbjct: 569 KARQAAP------CVLFFDELDSIAKARGGNIGDGGGAAD--RVINQILTEMDGMSTKKN 620
Query: 136 TGLSGRTLR 144
+ G T R
Sbjct: 621 VFIIGATNR 629
>UNIPROTKB|E2RLQ9 [details] [associations]
symbol:VCP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0070842 "aggresome assembly" evidence=IEA]
[GO:0045732 "positive regulation of protein catabolic process"
evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=IEA] [GO:0031593 "polyubiquitin binding" evidence=IEA]
[GO:0031334 "positive regulation of protein complex assembly"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0019903 "protein phosphatase binding"
evidence=IEA] [GO:0018279 "protein N-linked glycosylation via
asparagine" evidence=IEA] [GO:0006919 "activation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0031334 GO:GO:0006919 GO:GO:0006302
GO:GO:0000502 GO:GO:0006511 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR015415 Pfam:PF09336
GO:GO:0045732 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
OMA:AYRPIHK GO:GO:0030970 GeneTree:ENSGT00700000104534
GO:GO:0070842 EMBL:AAEX03007949 Ensembl:ENSCAFT00000003151
NextBio:20856352 Uniprot:E2RLQ9
Length = 822
Score = 150 (57.9 bits), Expect = 9.1e-08, P = 9.1e-08
Identities = 44/129 (34%), Positives = 70/129 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VL +GPPG GKT L KA+A + FI I L + +F ES V+++F+
Sbjct: 530 VLFYGPPGCGKTLLAKAIANECQ---------ANFISIKGPELLTMWFGESEANVREIFD 580
Query: 79 KIKEAVEYEESLVCLLI-DEIESLTRARE-SVMSGTEPSDGVRVVNAVLTQIDQLK-KKS 135
K ++A C+L DE++S+ +AR ++ G +D RV+N +LT++D + KK+
Sbjct: 581 KARQAAP------CVLFFDELDSIAKARGGNIGDGGGAAD--RVINQILTEMDGMSTKKN 632
Query: 136 TGLSGRTLR 144
+ G T R
Sbjct: 633 VFIIGATNR 641
>UNIPROTKB|I3LI39 [details] [associations]
symbol:I3LI39 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008568
"microtubule-severing ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00570000078874
Ensembl:ENSSSCT00000029727 OMA:QARECAP Uniprot:I3LI39
Length = 160
Score = 124 (48.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 37/89 (41%), Positives = 49/89 (55%)
Query: 17 RVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKM 76
R +LL GPPG GKT L KAVA + + F I++ SL SKY E KLV+ +
Sbjct: 48 RGLLLFGPPGNGKTMLAKAVAAESN---------ATFFNISAASLTSKYVGEGEKLVRAL 98
Query: 77 FNKIKEAVEYEESLVCLLIDEIESLTRAR 105
F A E + S++ IDE++SL R R
Sbjct: 99 F---AVARELQPSII--FIDEVDSLLRER 122
>ZFIN|ZDB-GENE-060312-22 [details] [associations]
symbol:zgc:136908 "zgc:136908" species:7955 "Danio
rerio" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 ZFIN:ZDB-GENE-060312-22
GO:GO:0005524 eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 HOGENOM:HOG000223224
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 HOVERGEN:HBG001226 EMBL:CU571167
EMBL:BC114306 IPI:IPI00835697 RefSeq:NP_001035017.1
UniGene:Dr.47664 SMR:Q29RA2 STRING:Q29RA2
Ensembl:ENSDART00000100551 GeneID:563679 KEGG:dre:563679
InParanoid:Q29RA2 OrthoDB:EOG4WWRMB NextBio:20885016 Uniprot:Q29RA2
Length = 805
Score = 148 (57.2 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 43/131 (32%), Positives = 68/131 (51%)
Query: 16 NRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQK 75
+R VL +GPPG GKT L KA+A + F+ I L + +F ES V+
Sbjct: 513 SRGVLFYGPPGCGKTLLAKAIANECQ---------ANFVSIKGPELLTMWFGESEANVRD 563
Query: 76 MFNKIKEAVEYEESLVCLLI-DEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQL-KK 133
+F+K ++A C+L DE++S+ +AR +G RV+N +LT++D + K
Sbjct: 564 VFDKARQAAP------CILFFDELDSIAKARGGG-AGDAGGAADRVINQILTEMDGMTNK 616
Query: 134 KSTGLSGRTLR 144
K+ + G T R
Sbjct: 617 KNVFIIGATNR 627
>GENEDB_PFALCIPARUM|PFF0940c [details] [associations]
symbol:PFF0940c "cell division cycle protein 48
homologue, putative" species:5833 "Plasmodium falciparum"
[GO:0051726 "regulation of cell cycle" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 148 (57.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 48/134 (35%), Positives = 70/134 (52%)
Query: 13 ISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKL 72
+S +R VL +GPPG GKT L KAVA + S F+ I L + +F ES
Sbjct: 511 MSPSRGVLFYGPPGCGKTLLAKAVASECS---------ANFVSIKGPELLTMWFGESEAN 561
Query: 73 VQKMFNKIKEAVEYEESLVCLLI-DEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQL 131
V+++F+K + A C+L DE++S+ R S + G G RV+N +LT+ID +
Sbjct: 562 VREVFDKARAAAP------CVLFFDELDSIGTQRGSSL-GDGSGAGDRVMNQLLTEIDGV 614
Query: 132 -KKKSTGLSGRTLR 144
KK+ G T R
Sbjct: 615 GPKKNLFFIGATNR 628
>UNIPROTKB|C6KT34 [details] [associations]
symbol:PFF0940c "Cell division cycle protein 48 homologue,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0051726
"regulation of cell cycle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0051301 GO:GO:0051726
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 OMA:AYRPIHK EMBL:AL844505 RefSeq:XP_966179.2
ProteinModelPortal:C6KT34 PRIDE:C6KT34
EnsemblProtists:PFF0940c:mRNA GeneID:3885942 KEGG:pfa:PFF0940c
EuPathDB:PlasmoDB:PF3D7_0619400 ProtClustDB:CLSZ2429060
Uniprot:C6KT34
Length = 828
Score = 148 (57.2 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 48/134 (35%), Positives = 70/134 (52%)
Query: 13 ISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKL 72
+S +R VL +GPPG GKT L KAVA + S F+ I L + +F ES
Sbjct: 511 MSPSRGVLFYGPPGCGKTLLAKAVASECS---------ANFVSIKGPELLTMWFGESEAN 561
Query: 73 VQKMFNKIKEAVEYEESLVCLLI-DEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQL 131
V+++F+K + A C+L DE++S+ R S + G G RV+N +LT+ID +
Sbjct: 562 VREVFDKARAAAP------CVLFFDELDSIGTQRGSSL-GDGSGAGDRVMNQLLTEIDGV 614
Query: 132 -KKKSTGLSGRTLR 144
KK+ G T R
Sbjct: 615 GPKKNLFFIGATNR 628
>WB|WBGene00008053 [details] [associations]
symbol:cdc-48.2 species:6239 "Caenorhabditis elegans"
[GO:0016887 "ATPase activity" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006310
"DNA recombination" evidence=IEA] [GO:0009378 "four-way junction
helicase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IGI;IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0007126
"meiosis" evidence=IMP] [GO:0030968 "endoplasmic reticulum unfolded
protein response" evidence=IMP] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IGI] [GO:0034098
"Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IPI] [GO:0005634
"nucleus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 147 (56.8 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 45/131 (34%), Positives = 67/131 (51%)
Query: 16 NRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQK 75
+R VL +GPPG GKT L KA+A + FI I L + +F ES V+
Sbjct: 516 SRGVLFYGPPGCGKTLLAKAIANECQ---------ANFISIKGPELLTMWFGESEANVRD 566
Query: 76 MFNKIKEAVEYEESLVCLLI-DEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLK-K 133
+F+K + A C+L DE++S+ +AR + G RV+N VLT++D + K
Sbjct: 567 VFDKARAAAP------CVLFFDELDSIAKARGGSV-GDAGGAADRVINQVLTEMDGMNAK 619
Query: 134 KSTGLSGRTLR 144
K+ + G T R
Sbjct: 620 KNVFIIGATNR 630
>UNIPROTKB|P54812 [details] [associations]
symbol:cdc-48.2 "Transitional endoplasmic reticulum ATPase
homolog 2" species:6239 "Caenorhabditis elegans" [GO:0042802
"identical protein binding" evidence=IPI] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0007126 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 EMBL:Z48334 GO:GO:0016887 GO:GO:0000910
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 GO:GO:0030968 HOGENOM:HOG000223224
KO:K13525 InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243 GO:GO:0034098
GeneTree:ENSGT00700000104534 GO:GO:0071712 EMBL:Z48045 PIR:T19879
RefSeq:NP_495705.1 ProteinModelPortal:P54812 SMR:P54812
DIP:DIP-26566N IntAct:P54812 MINT:MINT-1090535 STRING:P54812
PaxDb:P54812 PRIDE:P54812 EnsemblMetazoa:C41C4.8.1
EnsemblMetazoa:C41C4.8.2 EnsemblMetazoa:C41C4.8.3 GeneID:174309
KEGG:cel:CELE_C41C4.8 UCSC:C41C4.8.1 CTD:174309 WormBase:C41C4.8
InParanoid:P54812 OMA:ADRQDWE NextBio:883464 Uniprot:P54812
Length = 810
Score = 147 (56.8 bits), Expect = 2.0e-07, P = 2.0e-07
Identities = 45/131 (34%), Positives = 67/131 (51%)
Query: 16 NRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQK 75
+R VL +GPPG GKT L KA+A + FI I L + +F ES V+
Sbjct: 516 SRGVLFYGPPGCGKTLLAKAIANECQ---------ANFISIKGPELLTMWFGESEANVRD 566
Query: 76 MFNKIKEAVEYEESLVCLLI-DEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLK-K 133
+F+K + A C+L DE++S+ +AR + G RV+N VLT++D + K
Sbjct: 567 VFDKARAAAP------CVLFFDELDSIAKARGGSV-GDAGGAADRVINQVLTEMDGMNAK 619
Query: 134 KSTGLSGRTLR 144
K+ + G T R
Sbjct: 620 KNVFIIGATNR 630
>CGD|CAL0000732 [details] [associations]
symbol:CDC48 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0034098 "Cdc48p-Npl4p-Ufd1p AAA ATPase complex" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0036266 "Cdc48p-Npl4p-Vms1p
AAA ATPase complex" evidence=IEA] [GO:0000837 "Doa10p ubiquitin
ligase complex" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030970 "retrograde protein transport, ER to
cytosol" evidence=IEA] [GO:0031134 "sister chromatid biorientation"
evidence=IEA] [GO:0033047 "regulation of mitotic sister chromatid
segregation" evidence=IEA] [GO:0071629 "cytoplasm-associated
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:1900182 "positive regulation of protein
localization to nucleus" evidence=IEA] [GO:0071712 "ER-associated
misfolded protein catabolic process" evidence=IEA] [GO:0071630
"nucleus-associated proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051228 "mitotic spindle
disassembly" evidence=IEA] [GO:0016320 "endoplasmic reticulum
membrane fusion" evidence=IEA] [GO:0034727 "piecemeal
microautophagy of nucleus" evidence=IEA] [GO:0072671
"mitochondria-associated protein catabolic process" evidence=IEA]
[GO:0034517 "ribophagy" evidence=IEA] [GO:0061166 "establishment of
endoplasmic reticulum localization involved in endoplasmic
reticulum polarization at cell division site" evidence=IEA]
[GO:0016236 "macroautophagy" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0043130 "ubiquitin binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 147 (56.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 43/127 (33%), Positives = 65/127 (51%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VL GPPGTGKT L KAVA ++S FI + L S ++ ES ++ +F+
Sbjct: 525 VLFFGPPGTGKTLLAKAVATEVS---------ANFISVKGPELLSMWYGESESNIRDIFD 575
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLK-KKSTG 137
K + A + +DE++S+ +AR G RVVN +LT++D + KK+
Sbjct: 576 KARAAAP-----TVVFLDELDSIAKARGG-SHGDAGGASDRVVNQLLTEMDGMNAKKNVF 629
Query: 138 LSGRTLR 144
+ G T R
Sbjct: 630 VIGATNR 636
>UNIPROTKB|Q59WG3 [details] [associations]
symbol:CDC48 "Putative uncharacterized protein CDC48"
species:237561 "Candida albicans SC5314" [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0009986 "cell surface" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 CGD:CAL0000732 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0009986 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000114 EMBL:AACQ01000113
HOGENOM:HOG000223224 KO:K13525 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 RefSeq:XP_713945.1 RefSeq:XP_714003.1
ProteinModelPortal:Q59WG3 SMR:Q59WG3 STRING:Q59WG3 GeneID:3644394
GeneID:3644440 KEGG:cal:CaO19.2340 KEGG:cal:CaO19.9876
Uniprot:Q59WG3
Length = 826
Score = 147 (56.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 43/127 (33%), Positives = 65/127 (51%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VL GPPGTGKT L KAVA ++S FI + L S ++ ES ++ +F+
Sbjct: 525 VLFFGPPGTGKTLLAKAVATEVS---------ANFISVKGPELLSMWYGESESNIRDIFD 575
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLK-KKSTG 137
K + A + +DE++S+ +AR G RVVN +LT++D + KK+
Sbjct: 576 KARAAAP-----TVVFLDELDSIAKARGG-SHGDAGGASDRVVNQLLTEMDGMNAKKNVF 629
Query: 138 LSGRTLR 144
+ G T R
Sbjct: 630 VIGATNR 636
>GENEDB_PFALCIPARUM|PF10_0081 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory
subunit 4, putative" species:5833 "Plasmodium falciparum"
[GO:0004175 "endopeptidase activity" evidence=ISS] [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 143 (55.4 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 45/130 (34%), Positives = 69/130 (53%)
Query: 1 MKFSHSKVKSNI-ISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSH 59
+ +H ++ +I I + V+L+GPPGTGKT L KAVA + S F+ +
Sbjct: 211 LPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETS---------ATFLRVVGS 261
Query: 60 SLFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVR 119
L KY + KLV++MF K+ E E+ S+V IDEI+++ R SG E + R
Sbjct: 262 ELIQKYLGDGPKLVREMF-KVAE--EHAPSIV--FIDEIDAVGTKRYEATSGGE-REIQR 315
Query: 120 VVNAVLTQID 129
+ +L Q+D
Sbjct: 316 TMLELLNQLD 325
>UNIPROTKB|Q8IJW0 [details] [associations]
symbol:PF10_0081 "26S proteasome regulatory subunit 4,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0006508
GO:GO:0004175 GO:GO:0030163 GO:GO:0017111 EMBL:AE014185
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062
ProtClustDB:PTZ00361 GO:GO:0005838 RefSeq:XP_001347366.2
ProteinModelPortal:Q8IJW0 IntAct:Q8IJW0 MINT:MINT-1726172
PRIDE:Q8IJW0 EnsemblProtists:PF10_0081:mRNA GeneID:810239
KEGG:pfa:PF10_0081 EuPathDB:PlasmoDB:PF3D7_1008400 Uniprot:Q8IJW0
Length = 448
Score = 143 (55.4 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 45/130 (34%), Positives = 69/130 (53%)
Query: 1 MKFSHSKVKSNI-ISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSH 59
+ +H ++ +I I + V+L+GPPGTGKT L KAVA + S F+ +
Sbjct: 211 LPLTHPELYEDIGIKPPKGVILYGPPGTGKTLLAKAVANETS---------ATFLRVVGS 261
Query: 60 SLFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVR 119
L KY + KLV++MF K+ E E+ S+V IDEI+++ R SG E + R
Sbjct: 262 ELIQKYLGDGPKLVREMF-KVAE--EHAPSIV--FIDEIDAVGTKRYEATSGGE-REIQR 315
Query: 120 VVNAVLTQID 129
+ +L Q+D
Sbjct: 316 TMLELLNQLD 325
>CGD|CAL0001552 [details] [associations]
symbol:PR26 species:5476 "Candida albicans" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0001552 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 142 (55.0 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 40/120 (33%), Positives = 59/120 (49%)
Query: 17 RVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKM 76
R VLL+GPPGTGKT L KAVA + FI IN KY E ++V+ +
Sbjct: 190 RGVLLYGPPGTGKTMLVKAVANSTT---------ASFIRINGSEFVQKYLGEGPRMVRDV 240
Query: 77 FNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKKKST 136
F +E S + IDEI+++ R +G + + R++ +L Q+D + ST
Sbjct: 241 FRLARE-----NSPAIIFIDEIDAIATKRFDAQTGAD-REVQRILLELLNQMDGFDQTST 294
>UNIPROTKB|Q5A0L8 [details] [associations]
symbol:PR26 "Likely 26S proteasome regulatory particle
ATPase Rpt3p" species:237561 "Candida albicans SC5314" [GO:0005838
"proteasome regulatory particle" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0001552
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000088 EMBL:AACQ01000087 eggNOG:COG1222
TIGRFAMs:TIGR01242 KO:K03063 GO:GO:0005838 RefSeq:XP_715269.1
RefSeq:XP_715334.1 ProteinModelPortal:Q5A0L8 SMR:Q5A0L8
STRING:Q5A0L8 GeneID:3642981 GeneID:3643038 KEGG:cal:CaO19.13215
KEGG:cal:CaO19.5793 Uniprot:Q5A0L8
Length = 411
Score = 142 (55.0 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 40/120 (33%), Positives = 59/120 (49%)
Query: 17 RVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKM 76
R VLL+GPPGTGKT L KAVA + FI IN KY E ++V+ +
Sbjct: 190 RGVLLYGPPGTGKTMLVKAVANSTT---------ASFIRINGSEFVQKYLGEGPRMVRDV 240
Query: 77 FNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKKKST 136
F +E S + IDEI+++ R +G + + R++ +L Q+D + ST
Sbjct: 241 FRLARE-----NSPAIIFIDEIDAIATKRFDAQTGAD-REVQRILLELLNQMDGFDQTST 294
>ASPGD|ASPL0000032311 [details] [associations]
symbol:AN5747 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IEA] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IEA] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0006289 "nucleotide-excision
repair" evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001305 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
EnsemblFungi:CADANIAT00003315 Uniprot:C8VFJ3
Length = 393
Score = 141 (54.7 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 39/112 (34%), Positives = 62/112 (55%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L +AVA + T F+++ S ++ KY ES +L+++MF
Sbjct: 174 VLLYGPPGTGKTLLARAVASSME---------TNFLKVVSSAIVDKYIGESARLIREMFG 224
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV-RVVNAVLTQID 129
KE +E ++ +DEI+++ R S GT + R + +L Q+D
Sbjct: 225 YAKE---HEPCII--FMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQLD 269
>POMBASE|SPBC947.01 [details] [associations]
symbol:alf1 "ATP-dependent microtubule severing protein
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0001578
"microtubule bundle formation" evidence=ISS] [GO:0005524 "ATP
binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0008568 "microtubule-severing ATPase activity" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISM] [GO:0032153 "cell
division site" evidence=IDA] [GO:0051013 "microtubule severing"
evidence=ISS] [GO:0051286 "cell tip" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC947.01
GO:GO:0005524 GO:GO:0005634 GO:GO:0032153 GO:GO:0051286
EMBL:CU329671 GenomeReviews:CU329671_GR eggNOG:COG0464 PIR:T40781
RefSeq:NP_595275.1 HSSP:O75351 ProteinModelPortal:O43078 SMR:O43078
EnsemblFungi:SPBC947.01.1 GeneID:2541249 KEGG:spo:SPBC947.01
OrthoDB:EOG44TSHD NextBio:20802361 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336 Uniprot:O43078
Length = 660
Score = 144 (55.7 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 48/129 (37%), Positives = 64/129 (49%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LL GPPGTGKT L +AVA ++ K T F I++ SL SKY +S KLV+ +F
Sbjct: 415 MLLFGPPGTGKTMLARAVA--------TEAKAT-FFSISASSLTSKYLGDSEKLVRALFE 465
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKK----K 134
K ++ + +DEI+S+ AR SG E R+ L Q L K
Sbjct: 466 VAKR-----QTCSVIFVDEIDSILSARND--SGNEHESSRRLKTEFLIQWSSLTNAAPDK 518
Query: 135 STGLSGRTL 143
TG S R L
Sbjct: 519 QTGHSPRVL 527
>UNIPROTKB|K7EIJ8 [details] [associations]
symbol:KATNAL2 "Katanin p60 ATPase-containing subunit
A-like 2" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 EMBL:AC090373 EMBL:AC012254
HGNC:HGNC:25387 Ensembl:ENST00000588433 Uniprot:K7EIJ8
Length = 341
Score = 139 (54.0 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 43/125 (34%), Positives = 67/125 (53%)
Query: 10 SNIIS-WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSE 68
+ I+S W + +LL+GPPGTGKT L KAVA + T F I++ ++ SK+ +
Sbjct: 138 TGILSPW-KGLLLYGPPGTGKTLLAKAVATECK---------TTFFNISASTIVSKWRGD 187
Query: 69 SGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQI 128
S KLV+ +F E Y + +DE+ES+ R + SG E +R+ +L Q+
Sbjct: 188 SEKLVRVLF----ELARYHAPST-IFLDELESVMSQRGTA-SGGEHEGSLRMKTELLVQM 241
Query: 129 DQLKK 133
D L +
Sbjct: 242 DGLAR 246
>FB|FBgn0261014 [details] [associations]
symbol:TER94 "TER94" species:7227 "Drosophila melanogaster"
[GO:0045169 "fusome" evidence=IDA;NAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005783 "endoplasmic reticulum" evidence=NAS] [GO:0007030
"Golgi organization" evidence=IMP] [GO:0007317 "regulation of pole
plasm oskar mRNA localization" evidence=IMP] [GO:0016320
"endoplasmic reticulum membrane fusion" evidence=ISS] [GO:0000226
"microtubule cytoskeleton organization" evidence=IMP] [GO:0007029
"endoplasmic reticulum organization" evidence=IMP] [GO:0045451
"pole plasm oskar mRNA localization" evidence=IMP] [GO:0008103
"oocyte microtubule cytoskeleton polarization" evidence=IMP]
[GO:0008104 "protein localization" evidence=IMP] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0032436 "positive regulation of
proteasomal ubiquitin-dependent protein catabolic process"
evidence=IMP] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0030433 "ER-associated protein catabolic
process" evidence=IMP] [GO:0006200 "ATP catabolic process"
evidence=IGI] [GO:0048813 "dendrite morphogenesis" evidence=IMP]
[GO:0043523 "regulation of neuron apoptotic process" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE013599 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0005875 GO:GO:0000226
GO:GO:0030154 GO:GO:0005811 GO:GO:0006810 GO:GO:0006200
GO:GO:0048477 GO:GO:0030433 GO:GO:0000502 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0032436 InterPro:IPR015415 Pfam:PF09336 GO:GO:0007030
GO:GO:0007029 GO:GO:0016320 GO:GO:0045169 KO:K13525
InterPro:IPR004201 PANTHER:PTHR23077:SF18 Pfam:PF02933
SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
GeneTree:ENSGT00700000104534 GO:GO:0007317 EMBL:AF047037
EMBL:AF202034 EMBL:AF132553 RefSeq:NP_001097249.1
RefSeq:NP_001097250.1 RefSeq:NP_477369.1 UniGene:Dm.2968
ProteinModelPortal:Q7KN62 SMR:Q7KN62 IntAct:Q7KN62 STRING:Q7KN62
PaxDb:Q7KN62 PRIDE:Q7KN62 EnsemblMetazoa:FBtr0088391 GeneID:36040
KEGG:dme:Dmel_CG2331 UCSC:CG2331-RA CTD:36040 FlyBase:FBgn0261014
InParanoid:Q7KN62 OMA:RRGTDVN OrthoDB:EOG4TX96S GenomeRNAi:36040
NextBio:796507 Bgee:Q7KN62 Uniprot:Q7KN62
Length = 801
Score = 144 (55.7 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 43/131 (32%), Positives = 67/131 (51%)
Query: 16 NRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQK 75
+R VL +GPPG GKT L KA+A + FI + L + +F ES V+
Sbjct: 508 SRGVLFYGPPGCGKTLLAKAIANECQ---------ANFISVKGPELLTMWFGESEANVRD 558
Query: 76 MFNKIKEAVEYEESLVCLLI-DEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQL-KK 133
+F+K + A C+L DE++S+ +AR + G RV+N +LT++D + K
Sbjct: 559 IFDKARSAAP------CVLFFDELDSIAKARGGNV-GDAGGAADRVINQILTEMDGMGAK 611
Query: 134 KSTGLSGRTLR 144
K+ + G T R
Sbjct: 612 KNVFIIGATNR 622
>ASPGD|ASPL0000036562 [details] [associations]
symbol:AN2904 species:162425 "Emericella nidulans"
[GO:0070682 "proteasome regulatory particle assembly" evidence=IEA]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001306 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 TIGRFAMs:TIGR01242 EnsemblFungi:CADANIAT00010185
OMA:EDAYSAQ Uniprot:C8VJ79
Length = 422
Score = 139 (54.0 bits), Expect = 6.4e-07, P = 6.4e-07
Identities = 38/119 (31%), Positives = 59/119 (49%)
Query: 17 RVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKM 76
R VLL+GPPGTGKT L KAVA + FI +N KY E ++V+ +
Sbjct: 201 RGVLLYGPPGTGKTMLVKAVANSTT---------ASFIRVNGSEFVQKYLGEGPRMVRDV 251
Query: 77 FNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKKKS 135
F +E S + IDEI+++ R +G + + R++ +L Q+D ++ S
Sbjct: 252 FRMARE-----NSPAIIFIDEIDAIATKRFDAQTGAD-REVQRILLELLNQMDGFEQTS 304
>TAIR|locus:2007574 [details] [associations]
symbol:PEX6 "peroxin 6" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016558 "protein import into peroxisome matrix" evidence=IMP]
[GO:0006635 "fatty acid beta-oxidation" evidence=IMP] [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005524
GO:GO:0005737 GO:GO:0006635 GO:GO:0016558 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AC006550 TCDB:3.A.20.1.2
EMBL:AY333116 EMBL:AY078962 EMBL:BT001151 IPI:IPI00517292
PIR:F86160 RefSeq:NP_171799.2 UniGene:At.42567
ProteinModelPortal:Q8RY16 SMR:Q8RY16 STRING:Q8RY16 PaxDb:Q8RY16
PRIDE:Q8RY16 EnsemblPlants:AT1G03000.1 GeneID:839315
KEGG:ath:AT1G03000 GeneFarm:2442 TAIR:At1g03000
HOGENOM:HOG000241031 InParanoid:Q8RY16 KO:K13339 OMA:RRCFSHE
PhylomeDB:Q8RY16 ProtClustDB:CLSN2690380 Genevestigator:Q8RY16
Uniprot:Q8RY16
Length = 941
Score = 143 (55.4 bits), Expect = 7.2e-07, P = 7.2e-07
Identities = 45/121 (37%), Positives = 62/121 (51%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L KAVA + S+ F+ + L + Y ES K V+ +F
Sbjct: 694 VLLYGPPGTGKTLLAKAVATECSLN---------FLSVKGPELINMYIGESEKNVRDIFE 744
Query: 79 KIKEAVEYEESLVCLLI-DEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKKKSTG 137
K + A C++ DE++SL AR + SG RVV+ +L +ID L S
Sbjct: 745 KARSARP------CVIFFDELDSLAPARGA--SGDSGGVMDRVVSQMLAEIDGLSDSSQD 796
Query: 138 L 138
L
Sbjct: 797 L 797
>UNIPROTKB|E1BZ64 [details] [associations]
symbol:KATNAL2 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074466
OMA:KINQQRP EMBL:AADN02076143 IPI:IPI00581598
Ensembl:ENSGALT00000002868 Uniprot:E1BZ64
Length = 466
Score = 139 (54.0 bits), Expect = 7.7e-07, P = 7.7e-07
Identities = 43/125 (34%), Positives = 68/125 (54%)
Query: 10 SNIIS-WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSE 68
+ I+S W + +LL+GPPGTGKT L KAVA + + T F I++ ++ SK+ +
Sbjct: 209 TGILSPW-KGLLLYGPPGTGKTLLAKAVATECN---------TTFFNISASTIVSKWRGD 258
Query: 69 SGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQI 128
S KLV+ +F E Y + +DE+ES+ R ++ SG E R+ +L Q+
Sbjct: 259 SEKLVRVLF----ELARYHAPST-IFLDELESVMSQRGTI-SGGEHEGSRRMKTELLVQM 312
Query: 129 DQLKK 133
D L +
Sbjct: 313 DGLAR 317
>TAIR|locus:2147670 [details] [associations]
symbol:RPT6A "regulatory particle triple-A ATPase 6A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AF296836
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123395 EMBL:AB044348 EMBL:AY065174 EMBL:BT009668
IPI:IPI00542662 RefSeq:NP_568389.1 UniGene:At.10507
ProteinModelPortal:Q9C5U3 SMR:Q9C5U3 IntAct:Q9C5U3 STRING:Q9C5U3
PaxDb:Q9C5U3 PRIDE:Q9C5U3 EnsemblPlants:AT5G19990.1 GeneID:832121
KEGG:ath:AT5G19990 TAIR:At5g19990 InParanoid:Q9C5U3 KO:K03066
OMA:QNIKVIM PhylomeDB:Q9C5U3 ProtClustDB:CLSN2687185 Uniprot:Q9C5U3
Length = 419
Score = 138 (53.6 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 40/130 (30%), Positives = 67/130 (51%)
Query: 1 MKFSHSKVKSNI-ISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSH 59
+ H ++ ++ I+ + VLL+GPPGTGKT L +AVA FI ++
Sbjct: 179 LPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT---------FIRVSGS 229
Query: 60 SLFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVR 119
L KY E ++V+++F +E + S++ +DEI+S+ AR SG S+ R
Sbjct: 230 ELVQKYIGEGSRMVRELFVMARE---HAPSII--FMDEIDSIGSARMESGSGNGDSEVQR 284
Query: 120 VVNAVLTQID 129
+ +L Q+D
Sbjct: 285 TMLELLNQLD 294
>TAIR|locus:2147685 [details] [associations]
symbol:AT5G20000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;TAS]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0030163 GO:GO:0000502 HSSP:Q01853
GO:GO:0017111 EMBL:AF296836 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 ProtClustDB:CLSN2687185
EMBL:AY039965 EMBL:AY079403 EMBL:AK226206 EMBL:AY087503
IPI:IPI00530138 RefSeq:NP_197500.1 UniGene:At.51251
ProteinModelPortal:Q94BQ2 SMR:Q94BQ2 IntAct:Q94BQ2 STRING:Q94BQ2
PaxDb:Q94BQ2 PRIDE:Q94BQ2 EnsemblPlants:AT5G20000.1 GeneID:832122
KEGG:ath:AT5G20000 GeneFarm:1515 TAIR:At5g20000 InParanoid:Q94BQ2
OMA:TEILRIH PhylomeDB:Q94BQ2 Uniprot:Q94BQ2
Length = 419
Score = 138 (53.6 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 40/130 (30%), Positives = 67/130 (51%)
Query: 1 MKFSHSKVKSNI-ISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSH 59
+ H ++ ++ I+ + VLL+GPPGTGKT L +AVA FI ++
Sbjct: 179 LPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT---------FIRVSGS 229
Query: 60 SLFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVR 119
L KY E ++V+++F +E + S++ +DEI+S+ AR SG S+ R
Sbjct: 230 ELVQKYIGEGSRMVRELFVMARE---HAPSII--FMDEIDSIGSARMESGSGNGDSEVQR 284
Query: 120 VVNAVLTQID 129
+ +L Q+D
Sbjct: 285 TMLELLNQLD 294
>UNIPROTKB|Q8IYT4 [details] [associations]
symbol:KATNAL2 "Katanin p60 ATPase-containing subunit
A-like 2" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0008568 "microtubule-severing
ATPase activity" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR006594 Pfam:PF00004 PROSITE:PS00674
PROSITE:PS50896 SMART:SM00382 SMART:SM00667 GO:GO:0005524
GO:GO:0005737 InterPro:IPR013720 Pfam:PF08513 eggNOG:COG0464
HSSP:O75351 GO:GO:0008568 GO:GO:0005874 EMBL:CH471096 EMBL:AC090373
EMBL:AC012254 EMBL:BC034999 EMBL:BI560635 EMBL:DB461284
IPI:IPI00239789 IPI:IPI00894474 RefSeq:NP_112593.2
UniGene:Hs.404137 ProteinModelPortal:Q8IYT4 SMR:Q8IYT4
IntAct:Q8IYT4 STRING:Q8IYT4 PhosphoSite:Q8IYT4 DMDM:189028467
PaxDb:Q8IYT4 PRIDE:Q8IYT4 DNASU:83473 Ensembl:ENST00000245121
Ensembl:ENST00000356157 GeneID:83473 KEGG:hsa:83473 UCSC:uc002lco.3
CTD:83473 GeneCards:GC18P044526 HGNC:HGNC:25387 MIM:614697
neXtProt:NX_Q8IYT4 PharmGKB:PA134921461 HOGENOM:HOG000225146
HOVERGEN:HBG108053 InParanoid:Q8IYT4 OMA:KINQQRP OrthoDB:EOG4P5K8V
GenomeRNAi:83473 NextBio:72401 ArrayExpress:Q8IYT4 Bgee:Q8IYT4
CleanEx:HS_KATNAL2 Genevestigator:Q8IYT4 HAMAP:MF_03025
Uniprot:Q8IYT4
Length = 538
Score = 139 (54.0 bits), Expect = 9.6e-07, P = 9.6e-07
Identities = 43/125 (34%), Positives = 67/125 (53%)
Query: 10 SNIIS-WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSE 68
+ I+S W + +LL+GPPGTGKT L KAVA + T F I++ ++ SK+ +
Sbjct: 281 TGILSPW-KGLLLYGPPGTGKTLLAKAVATECK---------TTFFNISASTIVSKWRGD 330
Query: 69 SGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQI 128
S KLV+ +F E Y + +DE+ES+ R + SG E +R+ +L Q+
Sbjct: 331 SEKLVRVLF----ELARYHAPST-IFLDELESVMSQRGTA-SGGEHEGSLRMKTELLVQM 384
Query: 129 DQLKK 133
D L +
Sbjct: 385 DGLAR 389
>UNIPROTKB|F1M2L9 [details] [associations]
symbol:Katnal2 "Protein Katnal2" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR006594
Pfam:PF00004 PROSITE:PS50896 SMART:SM00382 SMART:SM00667
RGD:1564708 GO:GO:0005524 InterPro:IPR013720 Pfam:PF08513
GO:GO:0017111 GeneTree:ENSGT00550000074466 IPI:IPI00763458
Ensembl:ENSRNOT00000023967 Uniprot:F1M2L9
Length = 392
Score = 137 (53.3 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 43/125 (34%), Positives = 66/125 (52%)
Query: 10 SNIIS-WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSE 68
+ I+S W + +LL+GPPGTGKT L KAVA + T F I++ ++ SK+ +
Sbjct: 265 TGILSPW-KGLLLYGPPGTGKTLLAKAVATECK---------TTFFNISASTIVSKWRGD 314
Query: 69 SGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQI 128
S KLV+ +F E Y + +DE+ES+ R V G E +R+ +L Q+
Sbjct: 315 SEKLVRVLF----ELARYHAPST-IFLDELESVMSQRGMVPGG-EHEGSLRMKTELLVQM 368
Query: 129 DQLKK 133
D L +
Sbjct: 369 DGLAR 373
>DICTYBASE|DDB_G0292788 [details] [associations]
symbol:pex6 "peroxin 6" species:44689 "Dictyostelium
discoideum" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0007031 "peroxisome
organization" evidence=IEA;ISS] [GO:0005777 "peroxisome"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292788 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0005777 GO:GO:0007031 GO:GO:0005778 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 EMBL:AAFI02000196 KO:K13339
RefSeq:XP_629463.1 ProteinModelPortal:Q54CS8
EnsemblProtists:DDB0238049 GeneID:8628853 KEGG:ddi:DDB_G0292788
OMA:ANRIKIS Uniprot:Q54CS8
Length = 1201
Score = 143 (55.4 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 39/118 (33%), Positives = 64/118 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LL GPPGTGKT L KA+A + S+ F+ + L + Y ES K ++++FN
Sbjct: 955 ILLFGPPGTGKTLLAKAIATECSLN---------FLSVKGPELINMYIGESEKNIREIFN 1005
Query: 79 KIKEAVEYEESLVCLLI-DEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKKKS 135
K ++A C++ DE++SL +R + D RVV+ +L ++D ++K S
Sbjct: 1006 KARQAKP------CVIFFDELDSLAPSRGNGADSGGVMD--RVVSQLLAELDGMQKSS 1055
>POMBASE|SPBC23G7.12c [details] [associations]
symbol:rpt6 "19S proteasome regulatory subunit Rpt6
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0007346 "regulation of mitotic cell
cycle" evidence=IC] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC23G7.12c GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0005635 EMBL:CU329671 GenomeReviews:CU329671_GR
GO:GO:0016887 GO:GO:0004175 GO:GO:0006511 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 KO:K03066
OMA:TEILRIH EMBL:U02280 PIR:S45176 RefSeq:NP_595870.1
ProteinModelPortal:P41836 IntAct:P41836 STRING:P41836 PRIDE:P41836
EnsemblFungi:SPBC23G7.12c.1 GeneID:2540487 KEGG:spo:SPBC23G7.12c
OrthoDB:EOG44N21J NextBio:20801614 Uniprot:P41836
Length = 403
Score = 137 (53.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 35/111 (31%), Positives = 59/111 (53%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LL+GPPGTGKT L +AVA + FI ++ L KY E ++V+++F
Sbjct: 182 ILLYGPPGTGKTLLARAVAHHTDCK---------FIRVSGSELVQKYIGEGSRMVRELFV 232
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
+E + S++ +DEI+S+ +R G+ S+ R + +L Q+D
Sbjct: 233 MARE---HAPSII--FMDEIDSIGSSRSDSSGGSGDSEVQRTMLELLNQLD 278
>SGD|S000002802 [details] [associations]
symbol:RPT3 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0008540
"proteasome regulatory particle, base subcomplex" evidence=IDA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000002802 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:BK006938 GO:GO:0006511 GO:GO:0017111 GO:GO:0045899 EMBL:U32274
KO:K07101 RefSeq:NP_010687.3 GeneID:852008 KEGG:sce:YDR399W
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03063
OMA:DQTTNVK GeneTree:ENSGT00550000074962 OrthoDB:EOG46HKKC
EMBL:X73570 EMBL:U06229 PIR:S69678 RefSeq:NP_010682.3 PDB:2DZN
PDB:2DZO PDBsum:2DZN PDBsum:2DZO ProteinModelPortal:P33298
SMR:P33298 DIP:DIP-1587N IntAct:P33298 MINT:MINT-383865
STRING:P33298 PaxDb:P33298 PeptideAtlas:P33298 EnsemblFungi:YDR394W
GeneID:852003 KEGG:sce:YDR394W EvolutionaryTrace:P33298
NextBio:970192 Genevestigator:P33298 GermOnline:YDR394W
Uniprot:P33298
Length = 428
Score = 137 (53.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 38/113 (33%), Positives = 58/113 (51%)
Query: 17 RVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKM 76
R VLL+GPPGTGKT L KAVA FI +N KY E ++V+ +
Sbjct: 207 RGVLLYGPPGTGKTMLVKAVANSTK---------AAFIRVNGSEFVHKYLGEGPRMVRDV 257
Query: 77 FNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
F +E S++ IDE++S+ R +G++ + R++ +LTQ+D
Sbjct: 258 FRLARENAP---SII--FIDEVDSIATKRFDAQTGSD-REVQRILIELLTQMD 304
>POMBASE|SPCC1682.16 [details] [associations]
symbol:rpt4 "19S proteasome regulatory subunit Rpt4
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0004175
"endopeptidase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006511 "ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0007346 "regulation of mitotic
cell cycle" evidence=IC] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=NAS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC1682.16 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0007346 GO:GO:0043161 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0016887 GO:GO:0004175 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 GO:GO:0008540 PIR:T41073
PIR:T41279 RefSeq:NP_587809.2 ProteinModelPortal:O74445
STRING:O74445 PRIDE:O74445 EnsemblFungi:SPCC1682.16.1
GeneID:2539189 KEGG:spo:SPCC1682.16 OMA:DKERFIV OrthoDB:EOG40KC79
NextBio:20800360 Uniprot:O74445
Length = 388
Score = 136 (52.9 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 39/112 (34%), Positives = 61/112 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L +AVA L + F+++ S ++ KY ES +++++MF
Sbjct: 169 VLLYGPPGTGKTLLARAVAASLGVN---------FLKVVSSAIVDKYIGESARIIREMFG 219
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV-RVVNAVLTQID 129
KE E V + +DEI+++ R S GT + R + +L Q+D
Sbjct: 220 YAKE----HEPCV-IFMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQMD 264
>TAIR|locus:2028200 [details] [associations]
symbol:AT1G45000 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005618
"cell wall" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0005829 "cytosol"
evidence=RCA] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0030244
"cellulose biosynthetic process" evidence=RCA] [GO:0048193 "Golgi
vesicle transport" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0009506 GO:GO:0005524
GO:GO:0005737 GO:GO:0005618 GO:GO:0005730 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AC007915 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 OMA:EHKEVES
ProtClustDB:CLSN2679874 EMBL:AY062709 EMBL:AY114673 IPI:IPI00531336
RefSeq:NP_175120.1 UniGene:At.27257 ProteinModelPortal:Q9MAK9
SMR:Q9MAK9 IntAct:Q9MAK9 STRING:Q9MAK9 PaxDb:Q9MAK9 PRIDE:Q9MAK9
EnsemblPlants:AT1G45000.1 GeneID:841065 KEGG:ath:AT1G45000
GeneFarm:2760 TAIR:At1g45000 InParanoid:Q9MAK9 PhylomeDB:Q9MAK9
Uniprot:Q9MAK9
Length = 399
Score = 136 (52.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 36/112 (32%), Positives = 62/112 (55%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L +A+A + F+++ S ++ KY ES +L+++MFN
Sbjct: 176 VLLYGPPGTGKTLLARAIASNID---------ANFLKVVSSAIIDKYIGESARLIREMFN 226
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV-RVVNAVLTQID 129
+E ++ ++ +DEI+++ R S GT + R + +L Q+D
Sbjct: 227 YARE---HQPCII--FMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQLD 271
>TAIR|locus:2159996 [details] [associations]
symbol:RPT4A "regulatory particle triple-A ATPase 4A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618 GO:GO:0030163
GO:GO:0000502 HSSP:Q01853 GO:GO:0017111 EMBL:AB008264 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123393 EMBL:AF372945 EMBL:AY078040 EMBL:AK220732
IPI:IPI00547512 RefSeq:NP_199115.1 UniGene:At.6532
ProteinModelPortal:Q9SEI3 SMR:Q9SEI3 IntAct:Q9SEI3 STRING:Q9SEI3
PaxDb:Q9SEI3 PRIDE:Q9SEI3 EnsemblPlants:AT5G43010.1 GeneID:834316
KEGG:ath:AT5G43010 GeneFarm:2749 TAIR:At5g43010 InParanoid:Q9SEI3
OMA:NAPFDPE PhylomeDB:Q9SEI3 ProtClustDB:CLSN2679874 Uniprot:Q9SEI3
Length = 399
Score = 136 (52.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 36/112 (32%), Positives = 62/112 (55%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L +A+A + F+++ S ++ KY ES +L+++MFN
Sbjct: 176 VLLYGPPGTGKTLLARAIASNID---------ANFLKVVSSAIIDKYIGESARLIREMFN 226
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV-RVVNAVLTQID 129
+E ++ ++ +DEI+++ R S GT + R + +L Q+D
Sbjct: 227 YARE---HQPCII--FMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQLD 271
>UNIPROTKB|O50202 [details] [associations]
symbol:arc "Proteasome-associated ATPase" species:1833
"Rhodococcus erythropolis" [GO:0000502 "proteasome complex"
evidence=IGC] [GO:0010498 "proteasomal protein catabolic process"
evidence=IGC] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0022623 "proteasome-activating nucleotidase complex"
evidence=IGC] [GO:0043273 "CTPase activity" evidence=IDA]
HAMAP:MF_02112 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR022482 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016887 GO:GO:0010498
UniPathway:UPA00997 GO:GO:0022623 GO:GO:0019941
PANTHER:PTHR23073:SF4 TIGRFAMs:TIGR03689 EMBL:AF088800 PDB:2WFW
PDBsum:2WFW ProteinModelPortal:O50202 EvolutionaryTrace:O50202
GO:GO:0043273 Uniprot:O50202
Length = 591
Score = 138 (53.6 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 40/118 (33%), Positives = 65/118 (55%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRL------QSKYKITEFIEINSHSLFSKYFSESGKL 72
VLL+GPPG GKT + KAVA L+ ++ SK + F+ I L +K+ E+ +
Sbjct: 271 VLLYGPPGCGKTLIAKAVANSLAKKIAEARGQDSKDAKSYFLNIKGPELLNKFVGETERH 330
Query: 73 VQKMFNKIKEAVEYEESLVCLLIDEIESLTRARES-VMSGTEPSDGVRVVNAVLTQID 129
++ +F + +E E + V + DE++S+ R R S V S E + VV +L++ID
Sbjct: 331 IRMIFQRAREKAS-EGTPVIVFFDEMDSIFRTRGSGVSSDVETT----VVPQLLSEID 383
>UNIPROTKB|J9P5W4 [details] [associations]
symbol:KATNAL2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074466
EMBL:AAEX03005370 EMBL:AAEX03005368 EMBL:AAEX03005369
EMBL:AAEX03005371 Ensembl:ENSCAFT00000045108 Uniprot:J9P5W4
Length = 378
Score = 135 (52.6 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 42/125 (33%), Positives = 66/125 (52%)
Query: 10 SNIIS-WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSE 68
+ I+S W + +LL+GPPGTGKT L KAVA + T F I++ ++ SK+ +
Sbjct: 121 TGILSPW-KGLLLYGPPGTGKTLLAKAVATECK---------TTFFNISASTIVSKWRGD 170
Query: 69 SGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQI 128
S KLV+ +F E Y + +DE+ES+ R + G E +R+ +L Q+
Sbjct: 171 SEKLVRVLF----ELARYHAPST-IFLDELESVMSQRGTAPGG-EHEGSLRMKTELLVQM 224
Query: 129 DQLKK 133
D L +
Sbjct: 225 DGLAR 229
>RGD|1564708 [details] [associations]
symbol:Katnal2 "katanin p60 subunit A-like 2" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR006594
Pfam:PF00004 PROSITE:PS50896 SMART:SM00382 SMART:SM00667
RGD:1564708 GO:GO:0005524 InterPro:IPR013720 Pfam:PF08513
GO:GO:0017111 GeneTree:ENSGT00550000074466 IPI:IPI00367223
Ensembl:ENSRNOT00000048702 Uniprot:F1M5A4
Length = 522
Score = 137 (53.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 43/125 (34%), Positives = 66/125 (52%)
Query: 10 SNIIS-WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSE 68
+ I+S W + +LL+GPPGTGKT L KAVA + T F I++ ++ SK+ +
Sbjct: 265 TGILSPW-KGLLLYGPPGTGKTLLAKAVATECK---------TTFFNISASTIVSKWRGD 314
Query: 69 SGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQI 128
S KLV+ +F E Y + +DE+ES+ R V G E +R+ +L Q+
Sbjct: 315 SEKLVRVLF----ELARYHAPST-IFLDELESVMSQRGMVPGG-EHEGSLRMKTELLVQM 368
Query: 129 DQLKK 133
D L +
Sbjct: 369 DGLAR 373
>POMBASE|SPAC17A5.01 [details] [associations]
symbol:pex6 "peroxin-6 (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005777 "peroxisome"
evidence=ISO] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC17A5.01 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GO:GO:0005777 GenomeReviews:CU329670_GR GO:GO:0007031
GO:GO:0016887 GO:GO:0005778 eggNOG:COG0464 KO:K13339 PIR:T37816
RefSeq:NP_593468.1 ProteinModelPortal:O13764
EnsemblFungi:SPAC17A5.01.1 GeneID:2542437 KEGG:spo:SPAC17A5.01
OrthoDB:EOG48PQTF NextBio:20803494 Uniprot:O13764
Length = 948
Score = 140 (54.3 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 40/115 (34%), Positives = 59/115 (51%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L KAVA +LS+ EF+ I L + Y ES V+ +F
Sbjct: 691 VLLYGPPGTGKTLLAKAVATELSL---------EFVSIKGPELLNMYVGESEANVRNVFE 741
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKK 133
K + + S + DE++S+ R + D RVV+ +L ++D + K
Sbjct: 742 KARNS-----SPCVIFFDELDSIAPHRGNSSDSGNVMD--RVVSQLLAELDSISK 789
>SGD|S000000284 [details] [associations]
symbol:SEC18 "ATPase required for vesicular transport between
ER and Golgi" species:4932 "Saccharomyces cerevisiae" [GO:0048280
"vesicle fusion with Golgi apparatus" evidence=IDA] [GO:0042144
"vacuole fusion, non-autophagic" evidence=IDA] [GO:0048219
"inter-Golgi cisterna vesicle-mediated transport" evidence=IMP]
[GO:0043001 "Golgi to plasma membrane protein transport"
evidence=IMP] [GO:0048211 "Golgi vesicle docking" evidence=IDA]
[GO:0035494 "SNARE complex disassembly" evidence=IDA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006810
"transport" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0043332 "mating projection tip"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0000045 "autophagic
vacuole assembly" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 SGD:S000000284 Pfam:PF02359
GO:GO:0005524 GO:GO:0005737 GO:GO:0043332 GO:GO:0000045
EMBL:BK006936 GO:GO:0016887 KO:K09448 eggNOG:COG0464
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 EMBL:X76294
GO:GO:0043001 GO:GO:0048280 GO:GO:0042144 InterPro:IPR004201
Pfam:PF02933 SMART:SM01072 SMART:SM01073 EMBL:AF004912
GeneTree:ENSGT00530000064085 KO:K06027 OMA:HFIFALE
HOGENOM:HOG000198544 GO:GO:0048219 GO:GO:0035494 OrthoDB:EOG4PVS6W
EMBL:M20662 EMBL:Z35949 PIR:S45477 RefSeq:NP_009636.3
RefSeq:NP_009639.3 PDB:1CR5 PDBsum:1CR5 ProteinModelPortal:P18759
SMR:P18759 DIP:DIP-2497N IntAct:P18759 MINT:MINT-707733
STRING:P18759 PaxDb:P18759 PRIDE:P18759 EnsemblFungi:YBR080C
GeneID:852372 GeneID:852377 KEGG:sce:YBR080C KEGG:sce:YBR083W
CYGD:YBR080c EvolutionaryTrace:P18759 NextBio:971158
Genevestigator:P18759 GermOnline:YBR080C GO:GO:0048211
Uniprot:P18759
Length = 758
Score = 138 (53.6 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 52/150 (34%), Positives = 79/150 (52%)
Query: 3 FSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKY-KITEFIEINSHSL 61
F S ++ IS + +LL+GPPGTGKT +A+K+ L +K KI +N +
Sbjct: 261 FPPSVIEKLGISHVKGLLLYGPPGTGKT----LIARKIGTMLNAKEPKI-----VNGPEI 311
Query: 62 FSKYFSESGKLVQKMFNKIKEAVEY-----EESLVCLLIDEIESLTRARESVMSGTEPSD 116
SKY S + ++ +F K EA EY E SL ++ DE++S+ + R S GT D
Sbjct: 312 LSKYVGSSEENIRNLF-KDAEA-EYRAKGEESSLHIIIFDELDSVFKQRGSRGDGTGVGD 369
Query: 117 GVRVVNAVLTQIDQLKKKSTGLS-GRTLRK 145
V VN +L ++D + + + L G T RK
Sbjct: 370 NV--VNQLLAKMDGVDQLNNILVIGMTNRK 397
Score = 41 (19.5 bits), Expect = 1.6e-06, Sum P(2) = 1.6e-06
Identities = 9/25 (36%), Positives = 16/25 (64%)
Query: 152 VKYISNNSVSMENFLIALEKTVLDL 176
VK I+ S S NF + ++KT+ ++
Sbjct: 713 VKVINELSRSCPNFNVGIKKTLTNI 737
>MGI|MGI:1924234 [details] [associations]
symbol:Katnal2 "katanin p60 subunit A-like 2" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003674 "molecular_function" evidence=ND] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005874 "microtubule"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0008568 "microtubule-severing ATPase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR006594
Pfam:PF00004 PROSITE:PS00674 PROSITE:PS50896 SMART:SM00382
SMART:SM00667 MGI:MGI:1924234 GO:GO:0005524 GO:GO:0005737
InterPro:IPR013720 Pfam:PF08513 eggNOG:COG0464 HSSP:O75351
GO:GO:0008568 GO:GO:0005874 GeneTree:ENSGT00550000074466 CTD:83473
HOGENOM:HOG000225146 HOVERGEN:HBG108053 OMA:KINQQRP
OrthoDB:EOG4P5K8V HAMAP:MF_03025 EMBL:AK017114 EMBL:AC132608
EMBL:BC069977 IPI:IPI00316789 IPI:IPI00462519 IPI:IPI00894847
RefSeq:NP_081997.1 UniGene:Mm.35803 ProteinModelPortal:Q9D3R6
SMR:Q9D3R6 STRING:Q9D3R6 PhosphoSite:Q9D3R6 PRIDE:Q9D3R6
Ensembl:ENSMUST00000026486 Ensembl:ENSMUST00000126153
Ensembl:ENSMUST00000154665 GeneID:71206 KEGG:mmu:71206
UCSC:uc008fqx.1 UCSC:uc008fqz.1 InParanoid:Q9D3R6 NextBio:333285
Bgee:Q9D3R6 Genevestigator:Q9D3R6 Uniprot:Q9D3R6
Length = 539
Score = 137 (53.3 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 43/125 (34%), Positives = 66/125 (52%)
Query: 10 SNIIS-WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSE 68
+ I+S W + +LL+GPPGTGKT L KAVA + T F I++ ++ SK+ +
Sbjct: 282 TGILSPW-KGLLLYGPPGTGKTLLAKAVATECK---------TTFFNISASTIVSKWRGD 331
Query: 69 SGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQI 128
S KLV+ +F E Y + +DE+ES+ R V G E +R+ +L Q+
Sbjct: 332 SEKLVRVLF----ELARYHAPST-IFLDELESVMSQRGMVPGG-EHEGSLRMKTELLVQM 385
Query: 129 DQLKK 133
D L +
Sbjct: 386 DGLAR 390
>TAIR|locus:2085064 [details] [associations]
symbol:CDC48 "cell division cycle 48" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0042802 "identical protein binding" evidence=IPI] [GO:0022626
"cytosolic ribosome" evidence=IDA] [GO:0005618 "cell wall"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046686 "response to cadmium ion" evidence=IEP;RCA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005819
"spindle" evidence=IDA] [GO:0009524 "phragmoplast" evidence=IDA]
[GO:0009846 "pollen germination" evidence=IMP] [GO:0009860 "pollen
tube growth" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0005829 "cytosol" evidence=IDA] [GO:0009506
"plasmodesma" evidence=IDA] [GO:0048046 "apoplast" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0006486 "protein
glycosylation" evidence=RCA] [GO:0016310 "phosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886 GO:GO:0009506
GO:GO:0005524 GO:GO:0005794 GO:GO:0005618 GO:GO:0046686
GO:GO:0005635 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AC015985
GO:GO:0005730 GO:GO:0051301 GO:GO:0005819 GO:GO:0048046
GO:GO:0015031 GO:GO:0007049 GO:GO:0009860 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0022626 GO:GO:0009846 GO:GO:0009524 EMBL:U37587 EMBL:AY065076
EMBL:AY094434 IPI:IPI00547533 PIR:S60112 RefSeq:NP_187595.1
UniGene:At.21739 UniGene:At.33291 ProteinModelPortal:P54609
SMR:P54609 IntAct:P54609 STRING:P54609 PaxDb:P54609 PRIDE:P54609
ProMEX:P54609 EnsemblPlants:AT3G09840.1 GeneID:820142
KEGG:ath:AT3G09840 GeneFarm:1893 TAIR:At3g09840
HOGENOM:HOG000223224 InParanoid:P54609 KO:K13525 OMA:QIANECH
PhylomeDB:P54609 ProtClustDB:CLSN2684913 Genevestigator:P54609
GermOnline:AT3G09840 InterPro:IPR004201 PANTHER:PTHR23077:SF18
Pfam:PF02933 SMART:SM01072 SMART:SM01073 TIGRFAMs:TIGR01243
Uniprot:P54609
Length = 809
Score = 139 (54.0 bits), Expect = 1.7e-06, P = 1.7e-06
Identities = 42/134 (31%), Positives = 68/134 (50%)
Query: 13 ISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKL 72
+S ++ VL +GPPG GKT L KA+A + FI + L + +F ES
Sbjct: 511 MSPSKGVLFYGPPGCGKTLLAKAIANECQ---------ANFISVKGPELLTMWFGESEAN 561
Query: 73 VQKMFNKIKEAVEYEESLVCLLI-DEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQL 131
V+++F+K ++ S C+L DE++S+ R G RV+N +LT++D +
Sbjct: 562 VREIFDKARQ------SAPCVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMDGM 615
Query: 132 K-KKSTGLSGRTLR 144
KK+ + G T R
Sbjct: 616 NAKKTVFIIGATNR 629
>UNIPROTKB|I3LEM5 [details] [associations]
symbol:KATNAL2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074466
OMA:KINQQRP Ensembl:ENSSSCT00000029670 Uniprot:I3LEM5
Length = 355
Score = 134 (52.2 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 42/125 (33%), Positives = 66/125 (52%)
Query: 10 SNIIS-WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSE 68
+ I+S W + +LL+GPPGTGKT L KAVA + T F I++ ++ SK+ +
Sbjct: 232 TGILSPW-KGLLLYGPPGTGKTLLAKAVATECK---------TTFFNISASTIVSKWRGD 281
Query: 69 SGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQI 128
S KLV+ +F E Y + +DE+ES+ R + G E +R+ +L Q+
Sbjct: 282 SEKLVRVLF----ELARYHAPST-IFLDELESVMSHRGTAPGG-EHEGSLRMKTELLVQM 335
Query: 129 DQLKK 133
D L +
Sbjct: 336 DGLAR 340
>ZFIN|ZDB-GENE-051113-156 [details] [associations]
symbol:katnal2 "katanin p60 subunit A-like 2"
species:7955 "Danio rerio" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR006594 Pfam:PF00004 PROSITE:PS50896
SMART:SM00382 SMART:SM00667 ZFIN:ZDB-GENE-051113-156 GO:GO:0005524
InterPro:IPR013720 Pfam:PF08513 eggNOG:COG0464 GO:GO:0017111
CTD:83473 HOGENOM:HOG000225146 HOVERGEN:HBG108053 OrthoDB:EOG4P5K8V
EMBL:BC108056 IPI:IPI00636993 RefSeq:NP_001032491.1
UniGene:Dr.85176 ProteinModelPortal:Q32PM7 SMR:Q32PM7 GeneID:641431
KEGG:dre:641431 InParanoid:Q32PM7 NextBio:20901572 Uniprot:Q32PM7
Length = 485
Score = 136 (52.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 43/127 (33%), Positives = 67/127 (52%)
Query: 10 SNIIS-WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSE 68
+ I+S W + +LL+GPPGTGKT L KAVA + + T F I++ S+ SK+ +
Sbjct: 268 TGILSPW-KGLLLYGPPGTGKTMLAKAVATECN---------TTFFNISASSIVSKWRGD 317
Query: 69 SGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQI 128
S KLV+ +F E Y + +DE+ES+ R V G + R+ +L Q+
Sbjct: 318 SEKLVRVLF----ELARYHAPST-IFLDELESVMSQR-GVGQGGDHEGSRRMKTELLVQM 371
Query: 129 DQLKKKS 135
D L + +
Sbjct: 372 DGLARSN 378
>DICTYBASE|DDB_G0272777 [details] [associations]
symbol:DDB_G0272777 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0272777 GO:GO:0005524 EMBL:AAFI02000008
eggNOG:COG0464 GO:GO:0017111 RefSeq:XP_644963.1
ProteinModelPortal:Q86B10 EnsemblProtists:DDB0305119 GeneID:8618641
KEGG:ddi:DDB_G0272777 OMA:ITRAGRI Uniprot:Q86B10
Length = 738
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 38/118 (32%), Positives = 65/118 (55%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LLHGP G GK+ + KA+A ++SI FI I ++SK+ ES ++++ +F
Sbjct: 523 LLLHGPSGCGKSLMVKAIATEMSIN---------FISIKGSDIYSKWLGESERIIRDLF- 572
Query: 79 KIKEAVEYEESLVCLLI-DEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKKKS 135
K A S C++ DEI+SLT +R S + R+++ +L ++D ++ KS
Sbjct: 573 --KSA---RLSSPCIMFFDEIDSLTLSRGSGDDNEDGGTSKRILSQLLNEMDGIQVKS 625
>POMBASE|SPAC328.04 [details] [associations]
symbol:SPAC328.04 "AAA family ATPase, unknown biological
role" species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP
binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=ISM] [GO:0033554 "cellular response to stress"
evidence=IEP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC328.04 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:CU329670 GO:GO:0033554 GO:GO:0016887 eggNOG:COG0464
HSSP:O75351 OrthoDB:EOG44TSHD InterPro:IPR015415 Pfam:PF09336
EMBL:AB027998 RefSeq:NP_594206.1 ProteinModelPortal:Q9P3U2
SMR:Q9P3U2 EnsemblFungi:SPAC328.04.1 GeneID:2543208
KEGG:spo:SPAC328.04 NextBio:20804231 Uniprot:Q9P3U2
Length = 741
Score = 138 (53.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 44/117 (37%), Positives = 61/117 (52%)
Query: 17 RVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKM 76
R +LL GPPGTGKT L +AVA +S+ + F I++ SL SK+ ES KLV+ +
Sbjct: 493 RGMLLFGPPGTGKTMLARAVAT------ESR---SVFFSISASSLTSKFLGESEKLVRAL 543
Query: 77 FNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKK 133
F K+ S++ +DEI+SL AR S G E R+ L Q L +
Sbjct: 544 FTLAKKL---SPSII--FVDEIDSLLSARSS--DGNEHETSRRIKTEFLIQWSSLAR 593
>UNIPROTKB|J9NYM5 [details] [associations]
symbol:KATNAL2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR006594
Pfam:PF00004 PROSITE:PS50896 SMART:SM00382 SMART:SM00667
GO:GO:0005524 InterPro:IPR013720 Pfam:PF08513 GO:GO:0017111
GeneTree:ENSGT00550000074466 EMBL:AAEX03005370 EMBL:AAEX03005368
EMBL:AAEX03005369 EMBL:AAEX03005371 Ensembl:ENSCAFT00000044953
Uniprot:J9NYM5
Length = 431
Score = 135 (52.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 42/125 (33%), Positives = 66/125 (52%)
Query: 10 SNIIS-WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSE 68
+ I+S W + +LL+GPPGTGKT L KAVA + T F I++ ++ SK+ +
Sbjct: 253 TGILSPW-KGLLLYGPPGTGKTLLAKAVATECK---------TTFFNISASTIVSKWRGD 302
Query: 69 SGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQI 128
S KLV+ +F E Y + +DE+ES+ R + G E +R+ +L Q+
Sbjct: 303 SEKLVRVLF----ELARYHAPST-IFLDELESVMSQRGTAPGG-EHEGSLRMKTELLVQM 356
Query: 129 DQLKK 133
D L +
Sbjct: 357 DGLAR 361
>UNIPROTKB|B4DR63 [details] [associations]
symbol:PSMC1 "cDNA FLJ58247, highly similar to 26S protease
regulatory subunit 4" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0017111 GO:GO:0008233
EMBL:AL161662 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
UniGene:Hs.356654 HGNC:HGNC:9547 EMBL:AL355074 EMBL:AK299121
IPI:IPI01015427 SMR:B4DR63 STRING:B4DR63 Ensembl:ENST00000543772
Uniprot:B4DR63
Length = 367
Score = 133 (51.9 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 40/111 (36%), Positives = 60/111 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
V+L+GPPGTGKT L KAVA + S F+ + L KY + KLV+++F
Sbjct: 149 VILYGPPGTGKTLLAKAVANQTS---------ATFLRVVGSELIQKYLGDGPKLVRELF- 198
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
++ E E+ S+V IDEI+++ R SG E + R + +L Q+D
Sbjct: 199 RVAE--EHAPSIV--FIDEIDAIGTKRYDSNSGGE-REIQRTMLELLNQLD 244
>RGD|1308825 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005886
"plasma membrane" evidence=ISO] [GO:0022624 "proteasome accessory
complex" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308825 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 RefSeq:NP_001093979.1 UniGene:Rn.103233
GeneID:289990 KEGG:rno:289990 NextBio:630545 EMBL:BC107950
IPI:IPI00362105 ProteinModelPortal:Q32PW9 IntAct:Q32PW9
STRING:Q32PW9 PhosphoSite:Q32PW9 PRIDE:Q32PW9 UCSC:RGD:1308825
InParanoid:Q32PW9 ArrayExpress:Q32PW9 Genevestigator:Q32PW9
Uniprot:Q32PW9
Length = 381
Score = 133 (51.9 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 37/111 (33%), Positives = 62/111 (55%)
Query: 20 LLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFNK 79
LL+GPPGTGKT L +AVA +L F+++ S S+ KY ES +L+++MFN
Sbjct: 163 LLYGPPGTGKTLLARAVASQLDCN---------FLKVVSSSIVDKYIGESARLIREMFNY 213
Query: 80 IKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV-RVVNAVLTQID 129
++ ++ ++ +DEI+++ R S GT + R + +L Q+D
Sbjct: 214 ARD---HQPCII--FMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQMD 257
>POMBASE|SPBC4.07c [details] [associations]
symbol:rpt2 "19S proteasome regulatory subunit Rpt2"
species:4896 "Schizosaccharomyces pombe" [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IC] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IGI] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPBC4.07c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0007346
GO:GO:0043161 EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0016887
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03062 OMA:FIRNQER EMBL:Z29366 PIR:S39348
RefSeq:NP_595480.1 ProteinModelPortal:P36612 IntAct:P36612
STRING:P36612 PRIDE:P36612 EnsemblFungi:SPBC4.07c.1 GeneID:2540939
KEGG:spo:SPBC4.07c OrthoDB:EOG4FN7S6 NextBio:20802054
Uniprot:P36612
Length = 448
Score = 134 (52.2 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 39/111 (35%), Positives = 58/111 (52%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
V+L+G PGTGKT L KAVA + S F+ + L KY + +LV+++FN
Sbjct: 228 VILYGAPGTGKTLLAKAVANQTS---------ATFLRVVGSELIQKYLGDGPRLVRQLFN 278
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
A E+ S+V IDEI+++ R SG E + R + +L Q+D
Sbjct: 279 A---AEEHSPSIV--FIDEIDAIGTKRYDAQSGAE-REIQRTMLELLNQLD 323
>UNIPROTKB|Q5ZKX2 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826 EMBL:AADN02004069
EMBL:AJ719962 IPI:IPI00820938 RefSeq:NP_001006494.1
UniGene:Gga.16005 STRING:Q5ZKX2 Ensembl:ENSGALT00000037197
GeneID:423586 KEGG:gga:423586 InParanoid:Q5ZKX2 NextBio:20826039
Uniprot:Q5ZKX2
Length = 389
Score = 133 (51.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 37/111 (33%), Positives = 62/111 (55%)
Query: 20 LLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFNK 79
LL+GPPGTGKT L +AVA +L F+++ S S+ KY ES +L+++MFN
Sbjct: 171 LLYGPPGTGKTLLARAVASQLDCN---------FLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 80 IKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV-RVVNAVLTQID 129
++ ++ ++ +DEI+++ R S GT + R + +L Q+D
Sbjct: 222 ARD---HQPCII--FMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQMD 265
>UNIPROTKB|F1MLV1 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242 IPI:IPI00707369
UniGene:Bt.22570 GeneTree:ENSGT00550000074826 OMA:EHKEVES
EMBL:DAAA02027846 ProteinModelPortal:F1MLV1 SMR:F1MLV1 PRIDE:F1MLV1
Ensembl:ENSBTAT00000020886 Uniprot:F1MLV1
Length = 389
Score = 133 (51.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 37/111 (33%), Positives = 62/111 (55%)
Query: 20 LLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFNK 79
LL+GPPGTGKT L +AVA +L F+++ S S+ KY ES +L+++MFN
Sbjct: 171 LLYGPPGTGKTLLARAVASQLDCN---------FLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 80 IKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV-RVVNAVLTQID 129
++ ++ ++ +DEI+++ R S GT + R + +L Q+D
Sbjct: 222 ARD---HQPCII--FMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQMD 265
>UNIPROTKB|Q2KIW6 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 HSSP:Q9WZ49 KO:K03064 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 EMBL:BC112482
IPI:IPI00707369 RefSeq:NP_001039705.1 UniGene:Bt.22570
ProteinModelPortal:Q2KIW6 STRING:Q2KIW6 PRIDE:Q2KIW6 GeneID:518637
KEGG:bta:518637 CTD:5706 HOGENOM:HOG000225143 InParanoid:Q2KIW6
OrthoDB:EOG408N84 NextBio:20872697 Uniprot:Q2KIW6
Length = 389
Score = 133 (51.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 37/111 (33%), Positives = 62/111 (55%)
Query: 20 LLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFNK 79
LL+GPPGTGKT L +AVA +L F+++ S S+ KY ES +L+++MFN
Sbjct: 171 LLYGPPGTGKTLLARAVASQLDCN---------FLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 80 IKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV-RVVNAVLTQID 129
++ ++ ++ +DEI+++ R S GT + R + +L Q+D
Sbjct: 222 ARD---HQPCII--FMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQMD 265
>UNIPROTKB|P62333 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0030674 "protein binding, bridging" evidence=NAS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=IC]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005886 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0000082 GO:GO:0030674 GO:GO:0016887
EMBL:CH471078 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 EMBL:D78275 EMBL:AF006305 EMBL:BT006843
EMBL:CR456709 EMBL:AK313670 EMBL:BC005390 IPI:IPI00926977
PIR:S71316 RefSeq:NP_002797.3 UniGene:Hs.156171
ProteinModelPortal:P62333 SMR:P62333 DIP:DIP-38150N IntAct:P62333
MINT:MINT-5001174 STRING:P62333 PhosphoSite:P62333 DMDM:51702772
REPRODUCTION-2DPAGE:IPI00021926 PaxDb:P62333 PeptideAtlas:P62333
PRIDE:P62333 DNASU:5706 Ensembl:ENST00000445930 GeneID:5706
KEGG:hsa:5706 UCSC:uc010tqx.2 GeneCards:GC14P053173
H-InvDB:HIX0011661 HGNC:HGNC:9553 HPA:HPA042823 MIM:602708
neXtProt:NX_P62333 PharmGKB:PA33898 InParanoid:P62333
PhylomeDB:P62333 GenomeRNAi:5706 NextBio:22170 Bgee:P62333
CleanEx:HS_PSMC6 Genevestigator:P62333 GermOnline:ENSG00000100519
Uniprot:P62333
Length = 389
Score = 133 (51.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 37/111 (33%), Positives = 62/111 (55%)
Query: 20 LLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFNK 79
LL+GPPGTGKT L +AVA +L F+++ S S+ KY ES +L+++MFN
Sbjct: 171 LLYGPPGTGKTLLARAVASQLDCN---------FLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 80 IKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV-RVVNAVLTQID 129
++ ++ ++ +DEI+++ R S GT + R + +L Q+D
Sbjct: 222 ARD---HQPCII--FMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQMD 265
>UNIPROTKB|P62335 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:43179 "Spermophilus tridecemlineatus" [GO:0022624
"proteasome accessory complex" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
HOGENOM:HOG000225143 OrthoDB:EOG408N84 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:U36395 PIR:JC5349 ProteinModelPortal:P62335
SMR:P62335 PRIDE:P62335 Ensembl:ENSSTOT00000014492 Uniprot:P62335
Length = 389
Score = 133 (51.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 37/111 (33%), Positives = 62/111 (55%)
Query: 20 LLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFNK 79
LL+GPPGTGKT L +AVA +L F+++ S S+ KY ES +L+++MFN
Sbjct: 171 LLYGPPGTGKTLLARAVASQLDCN---------FLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 80 IKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV-RVVNAVLTQID 129
++ ++ ++ +DEI+++ R S GT + R + +L Q+D
Sbjct: 222 ARD---HQPCII--FMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQMD 265
>MGI|MGI:1914339 [details] [associations]
symbol:Psmc6 "proteasome (prosome, macropain) 26S subunit,
ATPase, 6" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1914339
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 CTD:5706 HOGENOM:HOG000225143
OrthoDB:EOG408N84 OMA:EHKEVES EMBL:AK012174 EMBL:AK014354
EMBL:AK144728 EMBL:AK166961 EMBL:BC043044 EMBL:BC057997
IPI:IPI00125971 RefSeq:NP_080235.2 UniGene:Mm.18472
ProteinModelPortal:P62334 SMR:P62334 IntAct:P62334 STRING:P62334
PhosphoSite:P62334 REPRODUCTION-2DPAGE:IPI00125971
REPRODUCTION-2DPAGE:P62334 PaxDb:P62334 PRIDE:P62334
Ensembl:ENSMUST00000022380 GeneID:67089 KEGG:mmu:67089
InParanoid:P62334 NextBio:323546 Bgee:P62334 Genevestigator:P62334
GermOnline:ENSMUSG00000021832 Uniprot:P62334
Length = 389
Score = 133 (51.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 37/111 (33%), Positives = 62/111 (55%)
Query: 20 LLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFNK 79
LL+GPPGTGKT L +AVA +L F+++ S S+ KY ES +L+++MFN
Sbjct: 171 LLYGPPGTGKTLLARAVASQLDCN---------FLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 80 IKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV-RVVNAVLTQID 129
++ ++ ++ +DEI+++ R S GT + R + +L Q+D
Sbjct: 222 ARD---HQPCII--FMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQMD 265
>ZFIN|ZDB-GENE-030131-304 [details] [associations]
symbol:psmc6 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008233 "peptidase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-304 GO:GO:0005524 GO:GO:0005737
GO:GO:0006508 GO:GO:0030163 GO:GO:0000502 GO:GO:0017111
GO:GO:0008233 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 CTD:5706 HOGENOM:HOG000225143
GeneTree:ENSGT00550000074826 OMA:NAPFDPE EMBL:BX936454
EMBL:AL954679 EMBL:BC083283 EMBL:BC152260 EMBL:BC155769
EMBL:AY648827 IPI:IPI00507865 RefSeq:NP_001003832.1
UniGene:Dr.32860 STRING:Q6DRD2 Ensembl:ENSDART00000053834
GeneID:321585 KEGG:dre:321585 InParanoid:Q6DRD2 NextBio:20807435
Uniprot:Q6DRD2
Length = 389
Score = 133 (51.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 37/111 (33%), Positives = 62/111 (55%)
Query: 20 LLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFNK 79
LL+GPPGTGKT L +AVA +L F+++ S S+ KY ES +L+++MFN
Sbjct: 171 LLYGPPGTGKTLLARAVASQLDCN---------FLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 80 IKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV-RVVNAVLTQID 129
++ ++ ++ +DEI+++ R S GT + R + +L Q+D
Sbjct: 222 ARD---HQPCII--FMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQMD 265
>UNIPROTKB|E1BAN2 [details] [associations]
symbol:KATNAL2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR006594
Pfam:PF00004 PROSITE:PS50896 SMART:SM00382 SMART:SM00667
GO:GO:0005524 InterPro:IPR013720 Pfam:PF08513 GO:GO:0017111
GeneTree:ENSGT00550000074466 OMA:KINQQRP EMBL:DAAA02056924
EMBL:DAAA02056925 IPI:IPI00715568 Ensembl:ENSBTAT00000025744
Uniprot:E1BAN2
Length = 534
Score = 135 (52.6 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 42/125 (33%), Positives = 66/125 (52%)
Query: 10 SNIIS-WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSE 68
+ I+S W + +LL+GPPGTGKT L KAVA + T F I++ ++ SK+ +
Sbjct: 277 TGILSPW-KGLLLYGPPGTGKTLLAKAVATECK---------TTFFNISASTIVSKWRGD 326
Query: 69 SGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQI 128
S KLV+ +F E Y + +DE+ES+ R + G E +R+ +L Q+
Sbjct: 327 SEKLVRVLF----ELARYHAPST-IFLDELESVMSQRGTAPGG-EHEGSLRMKTELLVQM 380
Query: 129 DQLKK 133
D L +
Sbjct: 381 DGLAR 385
>UNIPROTKB|E2RK60 [details] [associations]
symbol:KATNAL2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR006594
Pfam:PF00004 PROSITE:PS50896 SMART:SM00382 SMART:SM00667
GO:GO:0005524 InterPro:IPR013720 Pfam:PF08513 GO:GO:0017111
GeneTree:ENSGT00550000074466 EMBL:AAEX03005370 EMBL:AAEX03005368
EMBL:AAEX03005369 EMBL:AAEX03005371 Ensembl:ENSCAFT00000027875
Uniprot:E2RK60
Length = 535
Score = 135 (52.6 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 42/125 (33%), Positives = 66/125 (52%)
Query: 10 SNIIS-WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSE 68
+ I+S W + +LL+GPPGTGKT L KAVA + T F I++ ++ SK+ +
Sbjct: 278 TGILSPW-KGLLLYGPPGTGKTLLAKAVATECK---------TTFFNISASTIVSKWRGD 327
Query: 69 SGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQI 128
S KLV+ +F E Y + +DE+ES+ R + G E +R+ +L Q+
Sbjct: 328 SEKLVRVLF----ELARYHAPST-IFLDELESVMSQRGTAPGG-EHEGSLRMKTELLVQM 381
Query: 129 DQLKK 133
D L +
Sbjct: 382 DGLAR 386
>POMBASE|SPAC1834.11c [details] [associations]
symbol:sec18 "secretory pathway protein Sec18
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0042144 "vacuole fusion,
non-autophagic" evidence=ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 PomBase:SPAC1834.11c Pfam:PF02359 GO:GO:0005524
GO:GO:0005737 GO:GO:0006886 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0016887 eggNOG:COG0464 GO:GO:0006888 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042144 InterPro:IPR004201
Pfam:PF02933 SMART:SM01072 SMART:SM01073 KO:K06027 OMA:HFIFALE
HOGENOM:HOG000198544 PIR:T50122 RefSeq:NP_594690.1
ProteinModelPortal:Q9P7Q4 STRING:Q9P7Q4 EnsemblFungi:SPAC1834.11c.1
GeneID:2542410 KEGG:spo:SPAC1834.11c OrthoDB:EOG4PVS6W
NextBio:20803469 Uniprot:Q9P7Q4
Length = 792
Score = 137 (53.3 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 44/133 (33%), Positives = 75/133 (56%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LL+GPPGTGKT + + + + L+ R + KI +N + +KY +S + V+K+F
Sbjct: 307 ILLYGPPGTGKTLIARQIGKMLNAR---EPKI-----VNGPEILNKYVGQSEENVRKLFA 358
Query: 79 KIKEAVEY----EES-LVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKK 133
+ EY EES L ++ DE++++ + R S SG + G +VVN +L ++D + +
Sbjct: 359 DAER--EYRDRGEESGLHIIIFDELDAICKKRGS--SGGDTGVGDQVVNQLLAKMDGVDQ 414
Query: 134 KSTGLS-GRTLRK 145
+ L G T RK
Sbjct: 415 LNNILVIGMTNRK 427
>WB|WBGene00010557 [details] [associations]
symbol:mspn-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0016021 GO:GO:0005524 GO:GO:0040007 GO:GO:0002119
GO:GO:0005741 GO:GO:0010171 eggNOG:COG0464 GO:GO:0017111
HOGENOM:HOG000225141 GeneTree:ENSGT00550000074823 EMBL:Z69664
PIR:T23311 RefSeq:NP_501860.1 RefSeq:NP_501861.1 UniGene:Cel.22858
ProteinModelPortal:P54815 SMR:P54815 IntAct:P54815
MINT:MINT-1100399 STRING:P54815 PaxDb:P54815 PRIDE:P54815
EnsemblMetazoa:K04D7.2a.1 EnsemblMetazoa:K04D7.2a.2 GeneID:177896
KEGG:cel:CELE_K04D7.2 UCSC:K04D7.2a CTD:177896 WormBase:K04D7.2a
WormBase:K04D7.2b InParanoid:P54815 OMA:GDQIIVM NextBio:898840
Uniprot:P54815
Length = 342
Score = 132 (51.5 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 38/107 (35%), Positives = 62/107 (57%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
++F+ S+ S+++S R +LL+GPPG GKT L KAVA+ R FI + +
Sbjct: 103 LRFA-SQSGSHLLSPPRGILLYGPPGCGKTLLAKAVARAAGCR---------FINLQVSN 152
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARES 107
L K++ ES KL +F+ A +++ +++ IDEI+S R R+S
Sbjct: 153 LTDKWYGESQKLAAAVFSV---AQKFQPTII--FIDEIDSFLRDRQS 194
>UNIPROTKB|J9P1N0 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:AAEX03016845 Ensembl:ENSCAFT00000019502
Uniprot:J9P1N0
Length = 395
Score = 133 (51.9 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 37/111 (33%), Positives = 62/111 (55%)
Query: 20 LLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFNK 79
LL+GPPGTGKT L +AVA +L F+++ S S+ KY ES +L+++MFN
Sbjct: 177 LLYGPPGTGKTLLARAVASQLDCN---------FLKVVSSSIVDKYIGESARLIREMFNY 227
Query: 80 IKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV-RVVNAVLTQID 129
++ ++ ++ +DEI+++ R S GT + R + +L Q+D
Sbjct: 228 ARD---HQPCII--FMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQMD 271
>TAIR|locus:2101933 [details] [associations]
symbol:AtCDC48B "AT3G53230" species:3702 "Arabidopsis
thaliana" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0046686 "response to cadmium ion"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005654 "nucleoplasm" evidence=IDA] [GO:0045732 "positive
regulation of protein catabolic process" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0005794 GO:GO:0046686 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005654 GO:GO:0005730 GO:GO:0051301
GO:GO:0005856 GO:GO:0015031 GO:GO:0007049 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0045732 GO:GO:0009524 EMBL:AL132958 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK228801 IPI:IPI00520856 PIR:T46169
RefSeq:NP_190891.1 UniGene:At.23168 ProteinModelPortal:Q9SCN8
SMR:Q9SCN8 STRING:Q9SCN8 PaxDb:Q9SCN8 PRIDE:Q9SCN8
EnsemblPlants:AT3G53230.1 GeneID:824489 KEGG:ath:AT3G53230
GeneFarm:1909 TAIR:At3g53230 InParanoid:Q9SCN8 OMA:DIRRYEE
PhylomeDB:Q9SCN8 Genevestigator:Q9SCN8 GermOnline:AT3G53230
Uniprot:Q9SCN8
Length = 815
Score = 137 (53.3 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 45/135 (33%), Positives = 71/135 (52%)
Query: 13 ISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKL 72
+S ++ VL +GPPG GKT L KA+A + FI I L + +F ES
Sbjct: 512 MSPSKGVLFYGPPGCGKTLLAKAIANECQ---------ANFISIKGPELLTMWFGESEAN 562
Query: 73 VQKMFNKIKEAVEYEESLVCLLI-DEIESLTRAR-ESVMSGTEPSDGVRVVNAVLTQIDQ 130
V+++F+K ++ S C+L DE++S+ R SV +D RV+N +LT++D
Sbjct: 563 VREIFDKARQ------SAPCVLFFDELDSIATQRGNSVGDAGGAAD--RVLNQLLTEMDG 614
Query: 131 LK-KKSTGLSGRTLR 144
+ KK+ + G T R
Sbjct: 615 MNAKKTVFIIGATNR 629
>DICTYBASE|DDB_G0289003 [details] [associations]
symbol:psmC4 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0006972 "hyperosmotic response"
evidence=IEP] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0006508
"proteolysis" evidence=ISS] [GO:0005838 "proteasome regulatory
particle" evidence=ISS] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0000502
"proteasome complex" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0289003 GO:GO:0005524 GO:GO:0005634
GO:GO:0045335 GO:GO:0006508 GenomeReviews:CM000154_GR GO:GO:0006972
GO:GO:0004175 EMBL:AAFI02000129 GO:GO:0030163 GO:GO:0017111
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03063 OMA:DQTTNVK EMBL:L16578
PIR:JN0611 RefSeq:XP_636422.1 ProteinModelPortal:P34123 SMR:P34123
STRING:P34123 PRIDE:P34123 EnsemblProtists:DDB0191435
GeneID:8626913 KEGG:ddi:DDB_G0289003 ProtClustDB:PTZ00454
GO:GO:0005838 Uniprot:P34123
Length = 403
Score = 133 (51.9 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 41/125 (32%), Positives = 59/125 (47%)
Query: 5 HSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSK 64
H+ K I R VLL+GPPGTGKT L KAVA S FI + K
Sbjct: 173 HNLYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAHHTS---------AAFIRVVGSEFVQK 223
Query: 65 YFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAV 124
Y E +LV+ +F +E S + IDEI+++ R +G + + R++ +
Sbjct: 224 YLGEGPRLVRDVFRLARE-----NSPAIIFIDEIDAIATKRFDAQTGAD-REVQRILMEL 277
Query: 125 LTQID 129
L Q+D
Sbjct: 278 LNQMD 282
>DICTYBASE|DDB_G0292382 [details] [associations]
symbol:psmC5 "HIV TAT binding-protein-related"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0292382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0006508 GO:GO:0004175 GO:GO:0030163
GO:GO:0017111 EMBL:AAFI02000190 eggNOG:COG1222 TIGRFAMs:TIGR01242
GO:GO:0005838 KO:K03066 EMBL:L16579 PIR:JN0610 RefSeq:XP_629632.1
ProteinModelPortal:P34124 STRING:P34124 EnsemblProtists:DDB0216230
GeneID:8628696 KEGG:ddi:DDB_G0292382 OMA:RAALKHE
ProtClustDB:CLSZ2429412 Uniprot:P34124
Length = 403
Score = 133 (51.9 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 39/130 (30%), Positives = 67/130 (51%)
Query: 1 MKFSHSKVKSNI-ISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSH 59
+ H ++ ++ I+ + VLL+GPPGTGKT L +AVA FI ++
Sbjct: 163 LPIKHPELFESLGIAQPKGVLLYGPPGTGKTLLARAVAHHTDCT---------FIRVSGS 213
Query: 60 SLFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVR 119
L KY E ++V+++F +E + S++ +DEI+S+ +R SG S+ R
Sbjct: 214 ELVQKYIGEGSRMVRELFIMARE---HAPSII--FMDEIDSIGSSRGESGSGGGDSEVQR 268
Query: 120 VVNAVLTQID 129
+ +L Q+D
Sbjct: 269 TMLELLNQLD 278
>UNIPROTKB|F1NCS8 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0022624 "proteasome accessory
complex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 OMA:EHKEVES EMBL:AADN02004069
IPI:IPI00570965 Ensembl:ENSGALT00000020277 ArrayExpress:F1NCS8
Uniprot:F1NCS8
Length = 403
Score = 133 (51.9 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 37/111 (33%), Positives = 62/111 (55%)
Query: 20 LLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFNK 79
LL+GPPGTGKT L +AVA +L F+++ S S+ KY ES +L+++MFN
Sbjct: 185 LLYGPPGTGKTLLARAVASQLDCN---------FLKVVSSSIVDKYIGESARLIREMFNY 235
Query: 80 IKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV-RVVNAVLTQID 129
++ ++ ++ +DEI+++ R S GT + R + +L Q+D
Sbjct: 236 ARD---HQPCII--FMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQMD 279
>UNIPROTKB|F1SFE6 [details] [associations]
symbol:PSMC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 KO:K03064
TIGRFAMs:TIGR01242 CTD:5706 GeneTree:ENSGT00550000074826
OMA:EHKEVES EMBL:CU407115 RefSeq:XP_001928782.2 UniGene:Ssc.51323
Ensembl:ENSSSCT00000005554 GeneID:100154148 KEGG:ssc:100154148
ArrayExpress:F1SFE6 Uniprot:F1SFE6
Length = 403
Score = 133 (51.9 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 37/111 (33%), Positives = 62/111 (55%)
Query: 20 LLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFNK 79
LL+GPPGTGKT L +AVA +L F+++ S S+ KY ES +L+++MFN
Sbjct: 185 LLYGPPGTGKTLLARAVASQLDCN---------FLKVVSSSIVDKYIGESARLIREMFNY 235
Query: 80 IKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV-RVVNAVLTQID 129
++ ++ ++ +DEI+++ R S GT + R + +L Q+D
Sbjct: 236 ARD---HQPCII--FMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQMD 279
>RGD|2318218 [details] [associations]
symbol:LOC100365869 "proteasome (prosome, macropain) 26S
subunit, ATPase, 6-like" species:10116 "Rattus norvegicus"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:2318218
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:CH474040 KO:K03064 TIGRFAMs:TIGR01242 CTD:5706
GeneTree:ENSGT00550000074826 RefSeq:NP_001093979.1
UniGene:Rn.103233 Ensembl:ENSRNOT00000009649 GeneID:289990
KEGG:rno:289990 NextBio:630545 Uniprot:G3V6W6
Length = 403
Score = 133 (51.9 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 37/111 (33%), Positives = 62/111 (55%)
Query: 20 LLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFNK 79
LL+GPPGTGKT L +AVA +L F+++ S S+ KY ES +L+++MFN
Sbjct: 185 LLYGPPGTGKTLLARAVASQLDCN---------FLKVVSSSIVDKYIGESARLIREMFNY 235
Query: 80 IKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV-RVVNAVLTQID 129
++ ++ ++ +DEI+++ R S GT + R + +L Q+D
Sbjct: 236 ARD---HQPCII--FMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQMD 279
>TAIR|locus:2161258 [details] [associations]
symbol:RPT3 "regulatory particle triple-A ATPase 3"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IGI;ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=RCA;TAS] [GO:0005634 "nucleus" evidence=TAS]
[GO:0005618 "cell wall" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] [GO:0000502 "proteasome complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0009506 "plasmodesma"
evidence=IDA] [GO:0006094 "gluconeogenesis" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0006888
"ER to Golgi vesicle-mediated transport" evidence=RCA] [GO:0007010
"cytoskeleton organization" evidence=RCA] [GO:0009407 "toxin
catabolic process" evidence=RCA] [GO:0009735 "response to cytokinin
stimulus" evidence=RCA] [GO:0009853 "photorespiration"
evidence=RCA] [GO:0010498 "proteasomal protein catabolic process"
evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0048767 "root hair elongation" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
[GO:0080129 "proteasome core complex assembly" evidence=RCA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0009506 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
GO:GO:0016020 EMBL:AB019228 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:AF123392 EMBL:AY070466 EMBL:BT020373
IPI:IPI00537564 RefSeq:NP_200637.1 UniGene:At.45955
ProteinModelPortal:Q9SEI4 SMR:Q9SEI4 IntAct:Q9SEI4 STRING:Q9SEI4
PaxDb:Q9SEI4 PRIDE:Q9SEI4 EnsemblPlants:AT5G58290.1 GeneID:835941
KEGG:ath:AT5G58290 GeneFarm:1500 TAIR:At5g58290 InParanoid:Q9SEI4
KO:K03063 OMA:DQTTNVK ProtClustDB:CLSN2686094 Genevestigator:Q9SEI4
GermOnline:AT5G58290 Uniprot:Q9SEI4
Length = 408
Score = 133 (51.9 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 39/130 (30%), Positives = 63/130 (48%)
Query: 1 MKFSHSKVKSNI-ISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSH 59
+ +H ++ I I R VLL+GPPGTGKT L KAVA + FI +
Sbjct: 173 LPLTHHELYKQIGIDPPRGVLLYGPPGTGKTMLAKAVAN---------HTTAAFIRVVGS 223
Query: 60 SLFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVR 119
KY E ++V+ +F KE + + IDE++++ AR +G + + R
Sbjct: 224 EFVQKYLGEGPRMVRDVFRLAKE-----NAPAIIFIDEVDAIATARFDAQTGAD-REVQR 277
Query: 120 VVNAVLTQID 129
++ +L Q+D
Sbjct: 278 ILMELLNQMD 287
>UNIPROTKB|G4MRG5 [details] [associations]
symbol:MGG_02418 "Vesicular-fusion protein SEC18"
species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
EMBL:CM001231 KO:K06027 RefSeq:XP_003709204.1
ProteinModelPortal:G4MRG5 EnsemblFungi:MGG_02418T0 GeneID:2681515
KEGG:mgr:MGG_02418 Uniprot:G4MRG5
Length = 835
Score = 137 (53.3 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 44/131 (33%), Positives = 72/131 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMF- 77
+LL GPPGTGKT + + + + L+ R + KI IN + +KY +S + ++KMF
Sbjct: 345 ILLFGPPGTGKTLIARQIGKMLNAR---EPKI-----INGPEVLNKYVGQSEENIRKMFA 396
Query: 78 NKIKEAVEY--EESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKK-K 134
+ KE E E L ++ DE++++ + R S SG G VVN +L+++D + +
Sbjct: 397 DAEKEYAEKGDESGLHIIIFDELDAVCKQRGSG-SGGGTGVGDSVVNQLLSKLDGVNQLN 455
Query: 135 STGLSGRTLRK 145
+ L G T RK
Sbjct: 456 NILLIGMTNRK 466
>UNIPROTKB|J9PBP3 [details] [associations]
symbol:KATNAL2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR006594
Pfam:PF00004 PROSITE:PS50896 SMART:SM00382 SMART:SM00667
GO:GO:0005524 InterPro:IPR013720 Pfam:PF08513 GO:GO:0017111
GeneTree:ENSGT00550000074466 OMA:DLEMVLM EMBL:AAEX03005370
EMBL:AAEX03005368 EMBL:AAEX03005369 EMBL:AAEX03005371
Ensembl:ENSCAFT00000042868 Uniprot:J9PBP3
Length = 598
Score = 135 (52.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 42/125 (33%), Positives = 66/125 (52%)
Query: 10 SNIIS-WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSE 68
+ I+S W + +LL+GPPGTGKT L KAVA + T F I++ ++ SK+ +
Sbjct: 281 TGILSPW-KGLLLYGPPGTGKTLLAKAVATECK---------TTFFNISASTIVSKWRGD 330
Query: 69 SGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQI 128
S KLV+ +F E Y + +DE+ES+ R + G E +R+ +L Q+
Sbjct: 331 SEKLVRVLF----ELARYHAPST-IFLDELESVMSQRGTAPGG-EHEGSLRMKTELLVQM 384
Query: 129 DQLKK 133
D L +
Sbjct: 385 DGLAR 389
>UNIPROTKB|F1NTZ4 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 EMBL:AADN02003628 EMBL:AADN02003629
IPI:IPI00821206 Ensembl:ENSGALT00000037629 ArrayExpress:F1NTZ4
Uniprot:F1NTZ4
Length = 438
Score = 133 (51.9 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 40/111 (36%), Positives = 60/111 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
V+L+GPPGTGKT L KAVA + S F+ + L KY + KLV+++F
Sbjct: 220 VILYGPPGTGKTLLAKAVANQTS---------ATFLRVVGSELIQKYLGDGPKLVRELF- 269
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
++ E E+ S+V IDEI+++ R SG E + R + +L Q+D
Sbjct: 270 RVAE--EHAPSIV--FIDEIDAIGTKRYDSNSGGE-REIQRTMLELLNQLD 315
>UNIPROTKB|F1NSP7 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:FIRNQER
GeneTree:ENSGT00550000074818 IPI:IPI00585304 EMBL:AADN02003628
EMBL:AADN02003629 Ensembl:ENSGALT00000017367 ArrayExpress:F1NSP7
Uniprot:F1NSP7
Length = 439
Score = 133 (51.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 40/111 (36%), Positives = 60/111 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
V+L+GPPGTGKT L KAVA + S F+ + L KY + KLV+++F
Sbjct: 221 VILYGPPGTGKTLLAKAVANQTS---------ATFLRVVGSELIQKYLGDGPKLVRELF- 270
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
++ E E+ S+V IDEI+++ R SG E + R + +L Q+D
Sbjct: 271 RVAE--EHAPSIV--FIDEIDAIGTKRYDSNSGGE-REIQRTMLELLNQLD 316
>UNIPROTKB|A4FUZ3 [details] [associations]
symbol:PSMC1 "Proteasome (Prosome, macropain) 26S subunit,
ATPase, 1" species:9913 "Bos taurus" [GO:0022624 "proteasome
accessory complex" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
OMA:FIRNQER GeneTree:ENSGT00550000074818 OrthoDB:EOG4D7Z5Q
EMBL:DAAA02030032 EMBL:BC123487 IPI:IPI00695877 UniGene:Bt.12340
SMR:A4FUZ3 STRING:A4FUZ3 Ensembl:ENSBTAT00000007135
InParanoid:A4FUZ3 Uniprot:A4FUZ3
Length = 440
Score = 133 (51.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 40/111 (36%), Positives = 60/111 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
V+L+GPPGTGKT L KAVA + S F+ + L KY + KLV+++F
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTS---------ATFLRVVGSELIQKYLGDGPKLVRELF- 271
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
++ E E+ S+V IDEI+++ R SG E + R + +L Q+D
Sbjct: 272 RVAE--EHAPSIV--FIDEIDAIGTKRYDSNSGGE-REIQRTMLELLNQLD 317
>UNIPROTKB|F1PQ40 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:AAEX03005924
RefSeq:NP_001238880.1 ProteinModelPortal:F1PQ40
Ensembl:ENSCAFT00000027737 GeneID:100688636 KEGG:cfa:100688636
Uniprot:F1PQ40
Length = 440
Score = 133 (51.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 40/111 (36%), Positives = 60/111 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
V+L+GPPGTGKT L KAVA + S F+ + L KY + KLV+++F
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTS---------ATFLRVVGSELIQKYLGDGPKLVRELF- 271
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
++ E E+ S+V IDEI+++ R SG E + R + +L Q+D
Sbjct: 272 RVAE--EHAPSIV--FIDEIDAIGTKRYDSNSGGE-REIQRTMLELLNQLD 317
>UNIPROTKB|P62191 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0000502 "proteasome
complex" evidence=NAS] [GO:0000075 "cell cycle checkpoint"
evidence=TAS] [GO:0000082 "G1/S transition of mitotic cell cycle"
evidence=TAS] [GO:0000084 "S phase of mitotic cell cycle"
evidence=TAS] [GO:0000209 "protein polyubiquitination"
evidence=TAS] [GO:0000216 "M/G1 transition of mitotic cell cycle"
evidence=TAS] [GO:0000278 "mitotic cell cycle" evidence=TAS]
[GO:0002474 "antigen processing and presentation of peptide antigen
via MHC class I" evidence=TAS] [GO:0002479 "antigen processing and
presentation of exogenous peptide antigen via MHC class I,
TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] Reactome:REACT_13505
Reactome:REACT_578 Reactome:REACT_71 Reactome:REACT_21257
Reactome:REACT_6850 Reactome:REACT_111217 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 Reactome:REACT_111102 Reactome:REACT_116125
Reactome:REACT_6900 GO:GO:0006915 GO:GO:0010467 GO:GO:0016071
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0002479 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0006977 GO:GO:0042981 GO:GO:0000082
GO:GO:0016887 GO:GO:0051436 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
OMA:FIRNQER CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:L02426 EMBL:CR457044
EMBL:BC000512 EMBL:BC016368 EMBL:BC073818 IPI:IPI00011126
PIR:A44468 RefSeq:NP_002793.2 UniGene:Hs.356654
ProteinModelPortal:P62191 SMR:P62191 IntAct:P62191
MINT:MINT-1141832 STRING:P62191 PhosphoSite:P62191 DMDM:49065817
PaxDb:P62191 PeptideAtlas:P62191 PRIDE:P62191 DNASU:5700
Ensembl:ENST00000261303 GeneID:5700 KEGG:hsa:5700 UCSC:uc001xyf.3
GeneCards:GC14P090722 H-InvDB:HIX0030744 HGNC:HGNC:9547
HPA:HPA000872 MIM:602706 neXtProt:NX_P62191 PharmGKB:PA33892
InParanoid:P62191 PhylomeDB:P62191 GenomeRNAi:5700 NextBio:22146
ArrayExpress:P62191 Bgee:P62191 CleanEx:HS_PSMC1
Genevestigator:P62191 GermOnline:ENSG00000100764 Uniprot:P62191
Length = 440
Score = 133 (51.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 40/111 (36%), Positives = 60/111 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
V+L+GPPGTGKT L KAVA + S F+ + L KY + KLV+++F
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTS---------ATFLRVVGSELIQKYLGDGPKLVRELF- 271
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
++ E E+ S+V IDEI+++ R SG E + R + +L Q+D
Sbjct: 272 RVAE--EHAPSIV--FIDEIDAIGTKRYDSNSGGE-REIQRTMLELLNQLD 317
>UNIPROTKB|F2Z5J1 [details] [associations]
symbol:PSMC1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0022624 "proteasome accessory complex" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 TIGRFAMs:TIGR01242 KO:K03062 OMA:FIRNQER
GeneTree:ENSGT00550000074818 CTD:5700 EMBL:CT737375
RefSeq:NP_001231080.1 UniGene:Ssc.1911 ProteinModelPortal:F2Z5J1
SMR:F2Z5J1 PRIDE:F2Z5J1 Ensembl:ENSSSCT00000002703 GeneID:100155274
KEGG:ssc:100155274 Uniprot:F2Z5J1
Length = 440
Score = 133 (51.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 40/111 (36%), Positives = 60/111 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
V+L+GPPGTGKT L KAVA + S F+ + L KY + KLV+++F
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTS---------ATFLRVVGSELIQKYLGDGPKLVRELF- 271
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
++ E E+ S+V IDEI+++ R SG E + R + +L Q+D
Sbjct: 272 RVAE--EHAPSIV--FIDEIDAIGTKRYDSNSGGE-REIQRTMLELLNQLD 317
>MGI|MGI:106054 [details] [associations]
symbol:Psmc1 "protease (prosome, macropain) 26S subunit,
ATPase 1" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0017025
"TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:106054
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER CTD:5700
OrthoDB:EOG4D7Z5Q EMBL:U39302 EMBL:BC003860 IPI:IPI00133428
RefSeq:NP_032973.1 UniGene:Mm.157105 ProteinModelPortal:P62192
SMR:P62192 IntAct:P62192 STRING:P62192 PhosphoSite:P62192
REPRODUCTION-2DPAGE:IPI00133428 PaxDb:P62192 PRIDE:P62192
Ensembl:ENSMUST00000021595 GeneID:19179 KEGG:mmu:19179
InParanoid:P62192 NextBio:295866 Bgee:P62192 Genevestigator:P62192
GermOnline:ENSMUSG00000021178 Uniprot:P62192
Length = 440
Score = 133 (51.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 40/111 (36%), Positives = 60/111 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
V+L+GPPGTGKT L KAVA + S F+ + L KY + KLV+++F
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTS---------ATFLRVVGSELIQKYLGDGPKLVRELF- 271
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
++ E E+ S+V IDEI+++ R SG E + R + +L Q+D
Sbjct: 272 RVAE--EHAPSIV--FIDEIDAIGTKRYDSNSGGE-REIQRTMLELLNQLD 317
>RGD|621097 [details] [associations]
symbol:Psmc1 "proteasome (prosome, macropain) 26S subunit,
ATPase, 1" species:10116 "Rattus norvegicus" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737
"cytoplasm" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0016887 "ATPase activity" evidence=TAS] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621097 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016887
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062
GeneTree:ENSGT00550000074818 CTD:5700 OrthoDB:EOG4D7Z5Q EMBL:D50696
EMBL:BC063157 IPI:IPI00211733 RefSeq:NP_476464.1 UniGene:Rn.10526
ProteinModelPortal:P62193 SMR:P62193 IntAct:P62193 STRING:P62193
PRIDE:P62193 Ensembl:ENSRNOT00000005329 GeneID:117263
KEGG:rno:117263 UCSC:RGD:621097 InParanoid:P62193 NextBio:620148
Genevestigator:P62193 GermOnline:ENSRNOG00000003951 Uniprot:P62193
Length = 440
Score = 133 (51.9 bits), Expect = 3.5e-06, P = 3.5e-06
Identities = 40/111 (36%), Positives = 60/111 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
V+L+GPPGTGKT L KAVA + S F+ + L KY + KLV+++F
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTS---------ATFLRVVGSELIQKYLGDGPKLVRELF- 271
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
++ E E+ S+V IDEI+++ R SG E + R + +L Q+D
Sbjct: 272 RVAE--EHAPSIV--FIDEIDAIGTKRYDSNSGGE-REIQRTMLELLNQLD 317
>ASPGD|ASPL0000064945 [details] [associations]
symbol:AN6988 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:BN001304 GO:GO:0030163 GO:GO:0017111
EMBL:AACD01000117 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM OrthoDB:EOG44N21J
RefSeq:XP_664592.1 ProteinModelPortal:Q5AXJ2 STRING:Q5AXJ2
EnsemblFungi:CADANIAT00000491 GeneID:2869968 KEGG:ani:AN6988.2
Uniprot:Q5AXJ2
Length = 389
Score = 132 (51.5 bits), Expect = 3.7e-06, P = 3.7e-06
Identities = 37/111 (33%), Positives = 60/111 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L +AVA R FI ++ L KY E ++V+++F
Sbjct: 169 VLLYGPPGTGKTLLARAVAHHTDCR---------FIRVSGSELVQKYIGEGSRMVRELFV 219
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
+E + S++ +DEI+S+ +R +G+ S+ R + +L Q+D
Sbjct: 220 MARE---HAPSII--FMDEIDSIGSSRID-SAGSGDSEVQRTMLELLNQLD 264
>TAIR|locus:2831844 [details] [associations]
symbol:AtCDC48C "cell division cycle 48C" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005618 "cell wall" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005829 "cytosol" evidence=IDA] [GO:0005794
"Golgi apparatus" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005938
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005618
EMBL:AL162751 GO:GO:0051301 GO:GO:0005856 GO:GO:0015031
GO:GO:0007049 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0009524 UniGene:At.33291 HOGENOM:HOG000223224
KO:K13525 ProtClustDB:CLSN2684913 InterPro:IPR004201
PANTHER:PTHR23077:SF18 Pfam:PF02933 SMART:SM01072 SMART:SM01073
TIGRFAMs:TIGR01243 EMBL:AK117125 EMBL:AK118571 EMBL:BT006485
IPI:IPI00543476 RefSeq:NP_568114.1 ProteinModelPortal:Q9LZF6
SMR:Q9LZF6 IntAct:Q9LZF6 STRING:Q9LZF6 PRIDE:Q9LZF6
EnsemblPlants:AT5G03340.1 GeneID:831870 KEGG:ath:AT5G03340
GeneFarm:1899 TAIR:At5g03340 InParanoid:Q9LZF6 OMA:AYRPIHK
PhylomeDB:Q9LZF6 Genevestigator:Q9LZF6 GermOnline:AT5G03340
Uniprot:Q9LZF6
Length = 810
Score = 136 (52.9 bits), Expect = 3.8e-06, P = 3.8e-06
Identities = 42/134 (31%), Positives = 70/134 (52%)
Query: 13 ISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKL 72
+S ++ VL +GPPG GKT L KA+A + FI + L + +F ES
Sbjct: 511 MSPSKGVLFYGPPGCGKTLLAKAIANECQ---------ANFISVKGPELLTMWFGESEAN 561
Query: 73 VQKMFNKIKEAVEYEESLVCLLI-DEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQL 131
V+++F+K ++ S C+L DE++S+ R + +G RV+N +LT++D +
Sbjct: 562 VREIFDKARQ------SAPCVLFFDELDSIATQRGN-SAGDAGGAADRVLNQLLTEMDGM 614
Query: 132 K-KKSTGLSGRTLR 144
KK+ + G T R
Sbjct: 615 NAKKTVFIIGATNR 628
>FB|FBgn0015282 [details] [associations]
symbol:Rpt2 "Regulatory particle triple-A ATPase 2"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0000502 "proteasome complex"
evidence=NAS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=ISS] [GO:0004175 "endopeptidase activity" evidence=IDA]
[GO:0005838 "proteasome regulatory particle" evidence=ISS;IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0009987 "cellular process" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0008283 "cell proliferation"
evidence=IMP] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 EMBL:AE014297 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008283 GO:GO:0006508 GO:GO:0006974
GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 GO:GO:0000022
eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540 KO:K03062
OMA:FIRNQER GeneTree:ENSGT00550000074818 EMBL:U39303 EMBL:AY058759
RefSeq:NP_524469.2 UniGene:Dm.2368 ProteinModelPortal:P48601
SMR:P48601 DIP:DIP-17276N IntAct:P48601 MINT:MINT-817128
STRING:P48601 PaxDb:P48601 PRIDE:P48601 EnsemblMetazoa:FBtr0084520
GeneID:42828 KEGG:dme:Dmel_CG5289 CTD:42828 FlyBase:FBgn0015282
InParanoid:P48601 OrthoDB:EOG4R4XJ3 PhylomeDB:P48601
BRENDA:3.4.25.1 ChiTaRS:Pros26.4 GenomeRNAi:42828 NextBio:830777
Bgee:P48601 GermOnline:CG5289 Uniprot:P48601
Length = 439
Score = 132 (51.5 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 40/111 (36%), Positives = 60/111 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
V+L+GPPGTGKT L KAVA + S F+ + L KY + KLV+++F
Sbjct: 221 VILYGPPGTGKTLLAKAVANQTS---------ATFLRVVGSELIQKYLGDGPKLVRELF- 270
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
++ E E+ S+V IDEI+++ R SG E + R + +L Q+D
Sbjct: 271 RVAE--EHAPSIV--FIDEIDAVGTKRYDSNSGGE-REIQRTMLELLNQLD 316
>UNIPROTKB|Q90732 [details] [associations]
symbol:PSMC1 "26S protease regulatory subunit 4"
species:9031 "Gallus gallus" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0022624 "proteasome accessory complex" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03062 EMBL:U60187
IPI:IPI00585304 PIR:S74197 RefSeq:NP_990289.1 UniGene:Gga.1071
ProteinModelPortal:Q90732 STRING:Q90732 PRIDE:Q90732 GeneID:395804
KEGG:gga:395804 CTD:5700 InParanoid:Q90732 OrthoDB:EOG4D7Z5Q
NextBio:20815872 Uniprot:Q90732
Length = 440
Score = 132 (51.5 bits), Expect = 4.6e-06, P = 4.6e-06
Identities = 40/111 (36%), Positives = 60/111 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
V+L+GPPGTGKT L KAVA + S F+ + L KY + KLV+++F
Sbjct: 222 VILYGPPGTGKTLLAKAVANQTS---------ATFLRVVGSELIQKYLGDGPKLVRELF- 271
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
++ E E+ S+V IDEI+++ R SG E + R + +L Q+D
Sbjct: 272 RVAE--EHGPSIV--FIDEIDAIGTKRYDSNSGGE-REIQRTMLELLNQLD 317
>FB|FBgn0028685 [details] [associations]
symbol:Rpt4 "Regulatory particle triple-A ATPase 4"
species:7227 "Drosophila melanogaster" [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0006508
"proteolysis" evidence=ISS;IDA] [GO:0004175 "endopeptidase
activity" evidence=IDA] [GO:0005838 "proteasome regulatory
particle" evidence=ISS;IDA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:1901838 "positive regulation of transcription of nuclear large
rRNA transcript from RNA polymerase I promoter" evidence=IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0001163 "RNA polymerase I
regulatory region sequence-specific DNA binding" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0005875 GO:GO:0022008
GO:GO:0006508 GO:GO:0016887 GO:GO:0004175 GO:GO:0030163 HSSP:Q01853
TIGRFAMs:TIGR01242 GO:GO:0008540 EMBL:AY071182
ProteinModelPortal:Q8SZ19 SMR:Q8SZ19 IntAct:Q8SZ19 STRING:Q8SZ19
PRIDE:Q8SZ19 FlyBase:FBgn0028685 InParanoid:Q8SZ19
OrthoDB:EOG43TX9X ChiTaRS:Rpt4 ArrayExpress:Q8SZ19 Bgee:Q8SZ19
Uniprot:Q8SZ19
Length = 397
Score = 131 (51.2 bits), Expect = 5.0e-06, P = 5.0e-06
Identities = 36/111 (32%), Positives = 62/111 (55%)
Query: 20 LLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFNK 79
LL+GPPGTGKT L +AVA +L F+++ S ++ KY ES +L+++MFN
Sbjct: 179 LLYGPPGTGKTLLARAVASQLD---------ANFLKVVSSAIVDKYIGESARLIREMFNY 229
Query: 80 IKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV-RVVNAVLTQID 129
++ ++ ++ +DEI+++ R S GT + R + +L Q+D
Sbjct: 230 ARD---HQPCII--FMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQMD 273
>TAIR|locus:2044209 [details] [associations]
symbol:CDC48B "cell division cycle 48B" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=ISM] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0051301 GO:GO:0005856 GO:GO:0015031 GO:GO:0007049
eggNOG:COG0464 HOGENOM:HOG000223225 GO:GO:0017111 EMBL:AC006836
GO:GO:0009524 EMBL:AY062443 EMBL:BT008371 IPI:IPI00527776
PIR:A84451 RefSeq:NP_178463.1 UniGene:At.27340
ProteinModelPortal:Q9ZPR1 SMR:Q9ZPR1 PaxDb:Q9ZPR1 PRIDE:Q9ZPR1
EnsemblPlants:AT2G03670.1 GeneID:814895 KEGG:ath:AT2G03670
GeneFarm:1901 TAIR:At2g03670 InParanoid:Q9ZPR1 OMA:RECNAHL
PhylomeDB:Q9ZPR1 ProtClustDB:CLSN2683845 Genevestigator:Q9ZPR1
GermOnline:AT2G03670 Uniprot:Q9ZPR1
Length = 603
Score = 133 (51.9 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 41/125 (32%), Positives = 66/125 (52%)
Query: 13 ISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKL 72
+ W R +LL+GPPGTGKTSL +AV Q+ L I ++ HS+ + ES K+
Sbjct: 53 LKWPRGLLLYGPPGTGKTSLVRAVVQECDAHL---------IVLSPHSVHRAHAGESEKV 103
Query: 73 VQKMFNKIKE-AVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQL 131
+++ F + AV + S++ IDEI+ L R++ D VR+ + + T +D
Sbjct: 104 LREAFAEASSHAVSDKPSVI--FIDEIDVLCPRRDA----RREQD-VRIASQLFTLMDSN 156
Query: 132 KKKST 136
K S+
Sbjct: 157 KPSSS 161
Score = 122 (48.0 bits), Expect = 0.00010, P = 0.00010
Identities = 40/133 (30%), Positives = 63/133 (47%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+K S + VK I S R +LLHGPPG KT+L KA A F ++
Sbjct: 306 IKHSAAFVKMGI-SPMRGILLHGPPGCSKTTLAKAAANAAQ---------ASFFSLSCAE 355
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRV 120
LFS Y E L++ F + + A S++ DE + + R S + G R+
Sbjct: 356 LFSMYVGEGEALLRNTFQRARLA---SPSII--FFDEADVVACKRGDESSSNSSTVGERL 410
Query: 121 VNAVLTQIDQLKK 133
++ +LT++D L++
Sbjct: 411 LSTLLTEMDGLEE 423
>FB|FBgn0039788 [details] [associations]
symbol:Rpt6R "Regulatory particle triple-A ATPase 6-related"
species:7227 "Drosophila melanogaster" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=ISS] [GO:0006508 "proteolysis"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005875 "microtubule associated complex"
evidence=IDA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AE014297 GO:GO:0005524 GO:GO:0005737 GO:GO:0005875
GO:GO:0022008 GO:GO:0006200 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
GeneTree:ENSGT00550000074947 EMBL:AY119229 RefSeq:NP_651811.1
UniGene:Dm.13760 SMR:Q9VA54 IntAct:Q9VA54 MINT:MINT-308887
STRING:Q9VA54 EnsemblMetazoa:FBtr0085680 GeneID:43635
KEGG:dme:Dmel_CG2241 UCSC:CG2241-RA CTD:43635 FlyBase:FBgn0039788
InParanoid:Q9VA54 OMA:NDAYSAG OrthoDB:EOG41JWTK GenomeRNAi:43635
NextBio:834976 Uniprot:Q9VA54
Length = 399
Score = 130 (50.8 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 37/111 (33%), Positives = 60/111 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L +AVA FI ++ L K+ E ++V+++F
Sbjct: 180 VLLYGPPGTGKTLLARAVAHHTECT---------FIRVSGSELVQKFIGEGSRMVRELFV 230
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
+E + S++ +DEI+S+ AR + +GT S+ R + +L Q+D
Sbjct: 231 MARE---HAPSII--FMDEIDSIGSAR--LETGTGDSEVQRTMLELLNQLD 274
>CGD|CAL0006022 [details] [associations]
symbol:RPT6 species:5476 "Candida albicans" [GO:0005635
"nuclear envelope" evidence=IEA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IEA] [GO:0034515 "proteasome
storage granule" evidence=IEA] [GO:0019904 "protein domain specific
binding" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IEA] [GO:0032968 "positive regulation of
transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006289
"nucleotide-excision repair" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 CGD:CAL0006022
GO:GO:0005524 GO:GO:0005737 GO:GO:0030163 GO:GO:0017111
EMBL:AACQ01000103 eggNOG:COG1222 TIGRFAMs:TIGR01242 KO:K03066
RefSeq:XP_714440.1 ProteinModelPortal:Q59Y56 STRING:Q59Y56
GeneID:3643877 KEGG:cal:CaO19.3593 Uniprot:Q59Y56
Length = 401
Score = 130 (50.8 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 36/111 (32%), Positives = 60/111 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
V+L+GPPGTGKT L +AVA + FI ++ L KY E ++V+++F
Sbjct: 181 VILYGPPGTGKTLLARAVAHHTECK---------FIRVSGSELVQKYIGEGSRMVRELFV 231
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
+E + S++ +DEI+S+ +R SG + S+ R + +L Q+D
Sbjct: 232 MARE---HAPSII--FMDEIDSIGSSRVEGSSGGD-SEVQRTMLELLNQLD 276
>UNIPROTKB|I3L4J1 [details] [associations]
symbol:I3L4J1 "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 Pfam:PF04212 GO:GO:0017111
SMART:SM00745 EMBL:AC026464 Ensembl:ENST00000570054 Uniprot:I3L4J1
Length = 288
Score = 127 (49.8 bits), Expect = 7.4e-06, P = 7.4e-06
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+KF H W R +LL GPPGTGK+ L KAVA + + + F ++S
Sbjct: 171 IKFPHLFTGKRT-PW-RGILLFGPPGTGKSYLAKAVATEANN--------STFFSVSSSD 220
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRAR 105
L SK+ ES KLV+ +F ++ ++ S++ IDE++SL +R
Sbjct: 221 LMSKWLGESEKLVKNLFELARQ---HKPSII--FIDEVDSLCGSR 260
>ZFIN|ZDB-GENE-040426-1235 [details] [associations]
symbol:vps4b "vacuolar protein sorting 4b (yeast)"
species:7955 "Danio rerio" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-040426-1235 GO:GO:0005524 Pfam:PF04212 HSSP:Q01853
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 HOVERGEN:HBG057074
SMART:SM00745 KO:K12196 CTD:9525 EMBL:BC055202 IPI:IPI00836860
RefSeq:NP_957200.1 UniGene:Dr.85231 ProteinModelPortal:Q7SXY0
SMR:Q7SXY0 STRING:Q7SXY0 PRIDE:Q7SXY0 GeneID:393880 KEGG:dre:393880
NextBio:20814861 ArrayExpress:Q7SXY0 Bgee:Q7SXY0 Uniprot:Q7SXY0
Length = 437
Score = 130 (50.8 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 37/91 (40%), Positives = 53/91 (58%)
Query: 15 WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQ 74
W R +LL GPPGTGK+ L KAVA + + + F I+S L SK+ ES KLV+
Sbjct: 160 W-RGILLFGPPGTGKSYLAKAVATEANN--------STFFSISSSDLVSKWLGESEKLVK 210
Query: 75 KMFNKIKEAVEYEESLVCLLIDEIESLTRAR 105
+F +E ++ S++ IDEI+SL +R
Sbjct: 211 SLFTLARE---HKPSII--FIDEIDSLCGSR 236
>FB|FBgn0013998 [details] [associations]
symbol:Nsf2 "NEM-sensitive fusion protein 2" species:7227
"Drosophila melanogaster" [GO:0005737 "cytoplasm" evidence=ISS;NAS]
[GO:0007269 "neurotransmitter secretion" evidence=NAS] [GO:0016082
"synaptic vesicle priming" evidence=NAS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISS;NAS] [GO:0016192
"vesicle-mediated transport" evidence=NAS] [GO:0006891 "intra-Golgi
vesicle-mediated transport" evidence=NAS] [GO:0007274
"neuromuscular synaptic transmission" evidence=IMP] [GO:0008582
"regulation of synaptic growth at neuromuscular junction"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0031201
"SNARE complex" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0046872 GO:GO:0015031 GO:GO:0007274
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0008582 GO:GO:0016082 InterPro:IPR004201
Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00530000064085 KO:K06027 OrthoDB:EOG4RFJ7K
EMBL:U30502 EMBL:BT023784 EMBL:U28836 RefSeq:NP_788676.1
UniGene:Dm.6688 ProteinModelPortal:P54351 SMR:P54351
MINT:MINT-1669916 STRING:P54351 PaxDb:P54351 PRIDE:P54351
EnsemblMetazoa:FBtr0082883 GeneID:41694 KEGG:dme:Dmel_CG33101
CTD:41694 FlyBase:FBgn0013998 InParanoid:P54351 OMA:IFTLRTH
PhylomeDB:P54351 GenomeRNAi:41694 NextBio:825088 Bgee:P54351
GermOnline:CG33101 Uniprot:P54351
Length = 752
Score = 133 (51.9 bits), Expect = 7.6e-06, P = 7.6e-06
Identities = 40/131 (30%), Positives = 70/131 (53%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LL+GPPGTGKT + + + L+ R + KI +N + KY ES ++++F
Sbjct: 261 ILLYGPPGTGKTLMARQIGTMLNAR---EPKI-----VNGPQILDKYVGESEANIRRLFA 312
Query: 79 KIKEAVEY---EESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKKKS 135
+ +E + L ++ DEI+++ +AR SV + D VVN +L +ID +++ +
Sbjct: 313 EAEEEEKRLGPNSGLHIIIFDEIDAICKARGSVAGNSGVHD--TVVNQLLAKIDGVEQLN 370
Query: 136 TGLS-GRTLRK 145
L G T R+
Sbjct: 371 NILVIGMTNRR 381
>FB|FBgn0027605 [details] [associations]
symbol:Vps4 "Vacuolar protein sorting 4" species:7227
"Drosophila melanogaster" [GO:0006886 "intracellular protein
transport" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] [GO:0044130 "negative
regulation of growth of symbiont in host" evidence=IMP] [GO:0045197
"establishment or maintenance of epithelial cell apical/basal
polarity" evidence=IMP] [GO:0030036 "actin cytoskeleton
organization" evidence=IMP] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0006911 GO:GO:0030036
EMBL:AE014298 GO:GO:0006200 GO:GO:0016887 GO:GO:0044130
Pfam:PF04212 eggNOG:COG0464 InterPro:IPR015415 Pfam:PF09336
SMART:SM00745 GO:GO:0045197 GeneTree:ENSGT00550000074466
HSSP:Q9LCZ4 KO:K12196 OMA:FTGKRIP EMBL:AF145606 RefSeq:NP_573258.1
UniGene:Dm.3175 SMR:Q9Y162 IntAct:Q9Y162 MINT:MINT-919908
STRING:Q9Y162 EnsemblMetazoa:FBtr0074504 GeneID:32777
KEGG:dme:Dmel_CG6842 UCSC:CG6842-RA CTD:32777 FlyBase:FBgn0027605
InParanoid:Q9Y162 OrthoDB:EOG4K98TM ChiTaRS:Vps4 GenomeRNAi:32777
NextBio:780321 Uniprot:Q9Y162
Length = 442
Score = 130 (50.8 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 36/93 (38%), Positives = 55/93 (59%)
Query: 13 ISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKL 72
I W + +LL GPPGTGK+ L KAVA + + R + F ++S L SK+ ES KL
Sbjct: 163 IPW-KGILLFGPPGTGKSYLAKAVATEAN-R-------STFFSVSSSDLMSKWLGESEKL 213
Query: 73 VQKMFNKIKEAVEYEESLVCLLIDEIESLTRAR 105
V+ +F ++ ++ S++ IDEI+S+ AR
Sbjct: 214 VKNLFELARQ---HKPSII--FIDEIDSMCSAR 241
>GENEDB_PFALCIPARUM|PFC0140c [details] [associations]
symbol:PFC0140c "N-ethylmaleimide-sensitive
fusion protein, putative" species:5833 "Plasmodium falciparum"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0016887 HSSP:Q01853
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 EMBL:AL844502 KO:K06027
HOGENOM:HOG000198544 PIR:T18421 RefSeq:XP_001351105.1
ProteinModelPortal:O77313 EnsemblProtists:PFC0140c:mRNA
GeneID:814347 KEGG:pfa:PFC0140c EuPathDB:PlasmoDB:PF3D7_0303000
OMA:ESAHECE ProtClustDB:CLSZ2432490 Uniprot:O77313
Length = 783
Score = 133 (51.9 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 42/129 (32%), Positives = 75/129 (58%)
Query: 8 VKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFS 67
+K I + ++L+GPPGTGKT + + + + L+ R + KI IN + +KY
Sbjct: 279 IKQLSIKHVKGMILYGPPGTGKTLIARQIGKTLNAR---EPKI-----INGPEILNKYVG 330
Query: 68 ESGKLVQKMFNKIKEA-VEYEES-----LVCLLIDEIESLTRARESV-MSGTEPSDGVRV 120
+S + ++ +F K+A +EY++S L +++DEI+++ R R +V S T +D V
Sbjct: 331 QSEENIRNLF---KDAEMEYKQSGENSLLHIIILDEIDAICRQRGNVGSSSTGVNDSV-- 385
Query: 121 VNAVLTQID 129
VN +L++ID
Sbjct: 386 VNQLLSKID 394
>UNIPROTKB|O77313 [details] [associations]
symbol:PFC0140c "N-ethylmaleimide sensitive fusion protein,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0006200
"ATP catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0016887 HSSP:Q01853 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
EMBL:AL844502 KO:K06027 HOGENOM:HOG000198544 PIR:T18421
RefSeq:XP_001351105.1 ProteinModelPortal:O77313
EnsemblProtists:PFC0140c:mRNA GeneID:814347 KEGG:pfa:PFC0140c
EuPathDB:PlasmoDB:PF3D7_0303000 OMA:ESAHECE ProtClustDB:CLSZ2432490
Uniprot:O77313
Length = 783
Score = 133 (51.9 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 42/129 (32%), Positives = 75/129 (58%)
Query: 8 VKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFS 67
+K I + ++L+GPPGTGKT + + + + L+ R + KI IN + +KY
Sbjct: 279 IKQLSIKHVKGMILYGPPGTGKTLIARQIGKTLNAR---EPKI-----INGPEILNKYVG 330
Query: 68 ESGKLVQKMFNKIKEA-VEYEES-----LVCLLIDEIESLTRARESV-MSGTEPSDGVRV 120
+S + ++ +F K+A +EY++S L +++DEI+++ R R +V S T +D V
Sbjct: 331 QSEENIRNLF---KDAEMEYKQSGENSLLHIIILDEIDAICRQRGNVGSSSTGVNDSV-- 385
Query: 121 VNAVLTQID 129
VN +L++ID
Sbjct: 386 VNQLLSKID 394
>POMBASE|SPCC576.10c [details] [associations]
symbol:rpt3 "19S proteasome regulatory subunit Rpt3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0005524
"ATP binding" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISO] [GO:0008540 "proteasome regulatory particle,
base subcomplex" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0004175 "endopeptidase activity" evidence=ISO]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPCC576.10c GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0016887 GO:GO:0006511
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
GO:GO:0008540 KO:K03063 OMA:DQTTNVK PIR:T41420 RefSeq:NP_588437.1
ProteinModelPortal:O74894 SMR:O74894 STRING:O74894 PRIDE:O74894
EnsemblFungi:SPCC576.10c.1 GeneID:2539539 KEGG:spo:SPCC576.10c
OrthoDB:EOG46HKKC NextBio:20800700 Uniprot:O74894
Length = 389
Score = 129 (50.5 bits), Expect = 8.2e-06, P = 8.2e-06
Identities = 36/113 (31%), Positives = 56/113 (49%)
Query: 17 RVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKM 76
R VLL+GPPGTGKT L KAVA + FI + KY E ++V+ +
Sbjct: 169 RGVLLYGPPGTGKTMLVKAVANSTA---------ANFIRVVGSEFVQKYLGEGPRMVRDV 219
Query: 77 FNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
F +E + + IDEI+++ R +G + + R++ +LTQ+D
Sbjct: 220 FRMARE-----NAPAIIFIDEIDAIATKRFDAQTGAD-REVQRILIELLTQMD 266
>FB|FBgn0029656 [details] [associations]
symbol:CG10793 species:7227 "Drosophila melanogaster"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR006594 Pfam:PF00004 PROSITE:PS50896 SMART:SM00382
SMART:SM00667 GO:GO:0005524 InterPro:IPR013720 Pfam:PF08513
eggNOG:COG0464 GO:GO:0017111 HSSP:Q9LCZ4 EMBL:AY089357
ProteinModelPortal:Q8T446 SMR:Q8T446 PRIDE:Q8T446
FlyBase:FBgn0029656 InParanoid:Q8T446 OrthoDB:EOG44MW83 Bgee:Q8T446
Uniprot:Q8T446
Length = 479
Score = 130 (50.8 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 40/124 (32%), Positives = 66/124 (53%)
Query: 15 WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQ 74
W R +LLHGPPG+GKT L KA+ +++ ++T F I + + SK+ ES K+++
Sbjct: 239 W-RSLLLHGPPGSGKTLLAKALYS------ETQGQVT-FFNITASIMVSKWRGESEKILR 290
Query: 75 KMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKKK 134
+F+ A + S++ DEIESLT R+ T+ R N +L +D ++
Sbjct: 291 VLFHM---AAKRAPSVI--FFDEIESLTSKRDRA---TDHESSKRFKNELLQLLDGMEHS 342
Query: 135 STGL 138
G+
Sbjct: 343 LNGV 346
>UNIPROTKB|Q2HJB1 [details] [associations]
symbol:VPS4A "Vacuolar protein sorting 4 homolog A (S.
cerevisiae)" species:9913 "Bos taurus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111 SMART:SM00745
GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146 CTD:27183
KO:K12196 OrthoDB:EOG4G1MGD EMBL:DAAA02046699 EMBL:BC113224
IPI:IPI00694097 RefSeq:NP_001040080.1 UniGene:Bt.52831 SMR:Q2HJB1
STRING:Q2HJB1 Ensembl:ENSBTAT00000045547 GeneID:618168
KEGG:bta:618168 InParanoid:Q2HJB1 NextBio:20901036 Uniprot:Q2HJB1
Length = 318
Score = 127 (49.8 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+KF H W R +LL GPPGTGK+ L KAVA + + + F ++S
Sbjct: 147 IKFPHLFTGKRT-PW-RGILLFGPPGTGKSYLAKAVATEANN--------STFFSVSSSD 196
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRAR 105
L SK+ ES KLV+ +F ++ ++ S++ IDE++SL +R
Sbjct: 197 LMSKWLGESEKLVKNLFELARQ---HKPSII--FIDEVDSLCGSR 236
>FB|FBgn0000346 [details] [associations]
symbol:comt "comatose" species:7227 "Drosophila melanogaster"
[GO:0005737 "cytoplasm" evidence=ISS;NAS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=NAS] [GO:0007269
"neurotransmitter secretion" evidence=NAS] [GO:0016082 "synaptic
vesicle priming" evidence=NAS] [GO:0007030 "Golgi organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006911
"phagocytosis, engulfment" evidence=IMP] [GO:0048172 "regulation of
short-term neuronal synaptic plasticity" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005737 GO:GO:0006911
GO:GO:0046872 GO:GO:0015031 EMBL:AE014298 GO:GO:0016887
eggNOG:COG0464 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0007030 GO:GO:0048172 GO:GO:0016082 InterPro:IPR004201
Pfam:PF02933 SMART:SM01072 SMART:SM01073 CTD:1312 EMBL:U09373
EMBL:BT010259 RefSeq:NP_524877.1 UniGene:Dm.1772
ProteinModelPortal:P46461 SMR:P46461 DIP:DIP-20666N IntAct:P46461
MINT:MINT-288692 STRING:P46461 PaxDb:P46461 PRIDE:P46461
EnsemblMetazoa:FBtr0073754 EnsemblMetazoa:FBtr0333329 GeneID:47091
KEGG:dme:Dmel_CG1618 FlyBase:FBgn0000346
GeneTree:ENSGT00530000064085 InParanoid:P46461 KO:K06027
OMA:HFIFALE OrthoDB:EOG4RFJ7K PhylomeDB:P46461 GenomeRNAi:47091
NextBio:838904 Bgee:P46461 GermOnline:CG1618 Uniprot:P46461
Length = 745
Score = 132 (51.5 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 41/131 (31%), Positives = 69/131 (52%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LL+GPPGTGKT + + + L+ R + KI +N + KY ES V+++F
Sbjct: 256 ILLYGPPGTGKTLMARQIGTMLNAR---EPKI-----VNGPQILDKYVGESEANVRRLFA 307
Query: 79 KIKEAVEY---EESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKKKS 135
+ +E + L ++ DEI+++ + R SV + D VVN +LT+ID + + +
Sbjct: 308 EAEEEEKRLGPNSGLHIIIFDEIDAICKQRGSVAGNSGVHD--TVVNQLLTKIDGVDQLN 365
Query: 136 TGLS-GRTLRK 145
L G T R+
Sbjct: 366 NILVIGMTNRR 376
>SGD|S000004389 [details] [associations]
symbol:AFG2 "ATPase of the CDC48/PAS1/SEC18 (AAA) family,
forms a hexameric complex" species:4932 "Saccharomyces cerevisiae"
[GO:0030687 "preribosome, large subunit precursor"
evidence=IDA;IMP] [GO:0042493 "response to drug" evidence=IMP]
[GO:0005622 "intracellular" evidence=IDA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0042273 "ribosomal
large subunit biogenesis" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000004389 GO:GO:0005524 GO:GO:0042493
EMBL:BK006945 GO:GO:0016887 eggNOG:COG0464 HOGENOM:HOG000223225
KO:K14575 OrthoDB:EOG49CTH0 GO:GO:0042273 EMBL:L14615 EMBL:U19729
EMBL:AY693116 PIR:S39110 RefSeq:NP_013501.1
ProteinModelPortal:P32794 SMR:P32794 DIP:DIP-4470N IntAct:P32794
MINT:MINT-566202 STRING:P32794 PaxDb:P32794 PeptideAtlas:P32794
EnsemblFungi:YLR397C GeneID:851113 KEGG:sce:YLR397C CYGD:YLR397c
GeneTree:ENSGT00700000104502 OMA:MLLRCVA NextBio:967827
Genevestigator:P32794 GermOnline:YLR397C GO:GO:0030687
Uniprot:P32794
Length = 780
Score = 132 (51.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 37/99 (37%), Positives = 55/99 (55%)
Query: 13 ISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKL 72
+S R +LLHGPPGTGKT L + VA + + + IN S+ SKY E+
Sbjct: 276 VSPPRGILLHGPPGTGKTMLLRVVANTSNAHV---------LTINGPSIVSKYLGETEAA 326
Query: 73 VQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSG 111
++ +FN EA +Y+ S++ IDEI+S+ R + SG
Sbjct: 327 LRDIFN---EARKYQPSII--FIDEIDSIAPNRANDDSG 360
>UNIPROTKB|B4E2J1 [details] [associations]
symbol:ATAD1 "ATPase family AAA domain-containing protein
1" species:9606 "Homo sapiens" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
Pfam:PF00004 SMART:SM00382 GO:GO:0005524 GO:GO:0017111
HOGENOM:HOG000225141 EMBL:AL133327 EMBL:AC022016 UniGene:Hs.435948
HGNC:HGNC:25903 HOVERGEN:HBG057074 ChiTaRS:ATAD1 EMBL:AK304297
IPI:IPI00910210 SMR:B4E2J1 STRING:B4E2J1 Ensembl:ENST00000400215
UCSC:uc010qmr.1 Uniprot:B4E2J1
Length = 273
Score = 125 (49.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 36/107 (33%), Positives = 56/107 (52%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+K H S ++ + VLL+GPPG GKT + KA A++ R FI + +
Sbjct: 53 IKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCR---------FINLQPST 103
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARES 107
L K++ ES KL +F+ A++ + S++ IDEI+S R R S
Sbjct: 104 LTDKWYGESQKLAAAVFSL---AIKLQPSII--FIDEIDSFLRNRSS 145
>UNIPROTKB|Q9FXT8 [details] [associations]
symbol:OsRPT4 "Os02g0199900 protein" species:39947 "Oryza
sativa Japonica Group" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005886 GO:GO:0005524 GO:GO:0005737 GO:GO:0005618
GO:GO:0005730 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:AP008208
EMBL:CM000139 KO:K03064 EMBL:AP004869 TIGRFAMs:TIGR01242
OMA:EHKEVES GO:GO:0008540 ProtClustDB:CLSN2679874 EMBL:AP004812
EMBL:AB033536 RefSeq:NP_001046218.1 UniGene:Os.292 IntAct:Q9FXT8
STRING:Q9FXT8 EnsemblPlants:LOC_Os02g10640.1 GeneID:4328642
KEGG:osa:4328642 Uniprot:Q9FXT8
Length = 400
Score = 128 (50.1 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 35/112 (31%), Positives = 61/112 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L +A+A + F++I S ++ KY ES +L+++MF
Sbjct: 177 VLLYGPPGTGKTLLARAIASNID---------ANFLKIVSSAIIDKYIGESARLIREMFG 227
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV-RVVNAVLTQID 129
++ ++ ++ +DEI+++ R S GT + R + +L Q+D
Sbjct: 228 YARD---HQPCII--FMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQLD 272
>DICTYBASE|DDB_G0282181 [details] [associations]
symbol:nvl "valosin-containing protein" species:44689
"Dictyostelium discoideum" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISS] [GO:0000055 "ribosomal large subunit
export from nucleus" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282181 GO:GO:0005524 GO:GO:0005730
GenomeReviews:CM000152_GR EMBL:AAFI02000045 HSSP:Q01853
eggNOG:COG0464 GO:GO:0017111 GO:GO:0000055 KO:K14571
RefSeq:XP_640327.1 ProteinModelPortal:Q54SY2
EnsemblProtists:DDB0237516 GeneID:8623428 KEGG:ddi:DDB_G0282181
InParanoid:Q54SY2 OMA:KQIQYYK ProtClustDB:CLSZ2846768
Uniprot:Q54SY2
Length = 867
Score = 133 (51.9 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 38/117 (32%), Positives = 59/117 (50%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VL++GPPG GKT L KA+A + FI + L +KY ES + V+++F
Sbjct: 603 VLMYGPPGCGKTLLAKAIASECQ---------ANFISVKGPELLNKYVGESERAVRQVFQ 653
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKKKS 135
+ + S + DE ++L R G + RVVN +LT++D L+K+S
Sbjct: 654 RAAAS-----SPCVIFFDEFDALAPKRGGGDGGGNQATE-RVVNQLLTEMDGLEKRS 704
Score = 40 (19.1 bits), Expect = 1.2e-05, Sum P(2) = 1.2e-05
Identities = 9/34 (26%), Positives = 21/34 (61%)
Query: 158 NSVSMENFLIALEKTVLDLLVEEKSLPLKRNTEV 191
++V+ME+F+ AL K + +++ + K N ++
Sbjct: 802 DTVTMEDFIFALSKIKPSVSRKDELMYDKLNNDI 835
>ASPGD|ASPL0000034586 [details] [associations]
symbol:AN3061 species:162425 "Emericella nidulans"
[GO:0005768 "endosome" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0042803
"protein homodimerization activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0045053 "protein retention in
Golgi apparatus" evidence=IEA] [GO:0070676 "intralumenal vesicle
formation" evidence=IEA] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IEA] [GO:0051260
"protein homooligomerization" evidence=IEA] [GO:0016125 "sterol
metabolic process" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:BN001306 EMBL:AACD01000051 Pfam:PF04212 eggNOG:COG0464
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 SMART:SM00745
HOGENOM:HOG000225146 KO:K12196 OMA:FTGKRIP OrthoDB:EOG4V1B8K
RefSeq:XP_660665.1 ProteinModelPortal:Q5B8R9 SMR:Q5B8R9
STRING:Q5B8R9 EnsemblFungi:CADANIAT00010018 GeneID:2874497
KEGG:ani:AN3061.2 Uniprot:Q5B8R9
Length = 434
Score = 128 (50.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 33/91 (36%), Positives = 52/91 (57%)
Query: 15 WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQ 74
W + +LL+GPPGTGK+ L KAVA + + + F ++S L SK+ ES +LV+
Sbjct: 165 W-KGILLYGPPGTGKSYLAKAVATEAN---------STFFSVSSSDLVSKWMGESERLVK 214
Query: 75 KMFNKIKEAVEYEESLVCLLIDEIESLTRAR 105
++FN +E + IDE+++L AR
Sbjct: 215 QLFNMARE-----NKPAIIFIDEVDALCGAR 240
>ZFIN|ZDB-GENE-030131-8730 [details] [associations]
symbol:psmc1a "proteasome (prosome, macropain) 26S
subunit, ATPase, 1a" species:7955 "Danio rerio" [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-8730 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 HSSP:P43773
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 KO:K03062 EMBL:BC049471
IPI:IPI00500900 RefSeq:NP_956327.1 UniGene:Dr.76288
ProteinModelPortal:Q7ZWD1 STRING:Q7ZWD1 GeneID:336786
KEGG:dre:336786 CTD:336786 InParanoid:Q7ZWD1 NextBio:20811903
ArrayExpress:Q7ZWD1 Uniprot:Q7ZWD1
Length = 440
Score = 125 (49.1 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 39/111 (35%), Positives = 59/111 (53%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
V+L+G PGTGKT L KAVA + S F+ + L KY + KLV+++F
Sbjct: 222 VILYGAPGTGKTLLAKAVANQTS---------ATFLRVVGSELIQKYLGDGPKLVRELF- 271
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
++ E E+ S+V IDEI+++ R SG E + R + +L Q+D
Sbjct: 272 RVAE--EHAPSIV--FIDEIDAIGTKRYDSNSGGE-REIQRTMLELLNQLD 317
Score = 41 (19.5 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 213 YPLQHSKHFTELVQSHPGRCKVTSDDSTLN 242
+PL K + Q H R V +DD TL+
Sbjct: 353 FPLPDEKTKRRIFQIHTSRMTV-ADDVTLD 381
>ZFIN|ZDB-GENE-060929-388 [details] [associations]
symbol:vps4a "vacuolar protein sorting 4a (yeast)"
species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 ZFIN:ZDB-GENE-060929-388
GO:GO:0005524 Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111
InterPro:IPR015415 Pfam:PF09336 HOVERGEN:HBG057074 SMART:SM00745
CTD:27183 KO:K12196 EMBL:BC124488 IPI:IPI00804704
RefSeq:NP_001070077.1 UniGene:Dr.161728 ProteinModelPortal:Q08BZ6
SMR:Q08BZ6 STRING:Q08BZ6 PRIDE:Q08BZ6 GeneID:767670 KEGG:dre:767670
NextBio:20918061 Uniprot:Q08BZ6
Length = 440
Score = 128 (50.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 37/105 (35%), Positives = 58/105 (55%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+KF H W R +LL GPPGTGK+ L KAVA + + + F ++S
Sbjct: 146 IKFPHLFTGKRT-PW-RGILLFGPPGTGKSYLAKAVATEANN--------STFFSVSSSD 195
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRAR 105
L SK+ ES KLV+ +F+ ++ ++ S++ IDE++SL +R
Sbjct: 196 LMSKWLGESEKLVKNLFDLARQ---HKPSII--FIDEVDSLCGSR 235
>DICTYBASE|DDB_G0276169 [details] [associations]
symbol:DDB_G0276169 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0006626 "protein targeting to mitochondrion" evidence=ISS]
[GO:0006200 "ATP catabolic process" evidence=ISS] [GO:0005741
"mitochondrial outer membrane" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 dictyBase:DDB_G0276169 GO:GO:0005524 GO:GO:0006626
GO:GO:0005741 EMBL:AAFI02000014 GO:GO:0016887 eggNOG:COG0464
RefSeq:XP_001134596.1 ProteinModelPortal:Q1ZXK7
EnsemblProtists:DDB0233374 GeneID:8620390 KEGG:ddi:DDB_G0276169
InParanoid:Q1ZXK7 OMA:WYGETEK Uniprot:Q1ZXK7
Length = 330
Score = 126 (49.4 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 36/114 (31%), Positives = 61/114 (53%)
Query: 2 KFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSL 61
K + +++ S + +LL+GPPGTGKT L KA++ Y F+ I++ L
Sbjct: 106 KAKNGSFHNDLFSVPKGILLYGPPGTGKTMLAKAISYHCG------YN---FLVIDNSML 156
Query: 62 FSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPS 115
SK++ E+ K+V MF+ K+ + +++ IDEI+S+ RE + T S
Sbjct: 157 DSKWYGETEKMVSAMFSVAKKL---QPTII--FIDEIDSMVSTREDSENETSNS 205
>WB|WBGene00004504 [details] [associations]
symbol:rpt-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0010171 "body morphogenesis" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 127 (49.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 20 LLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFNK 79
LL GPPGTGKT L +AVA +L F+++ S ++ KY ES +++++MFN
Sbjct: 188 LLFGPPGTGKTLLARAVASQLDCN---------FLKVVSSAIVDKYIGESARMIREMFNY 238
Query: 80 IKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV-RVVNAVLTQID 129
++ ++ +V +DEI+++ R S GT + R + +L Q+D
Sbjct: 239 ARD---HQPCIV--FMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQLD 282
>UNIPROTKB|O17071 [details] [associations]
symbol:rpt-4 "Probable 26S protease regulatory subunit 10B"
species:6239 "Caenorhabditis elegans" [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0040010 GO:GO:0002119
GO:GO:0010171 GO:GO:0040011 GO:GO:0000003 GO:GO:0030163
GO:GO:0017111 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 EMBL:FO080251 PIR:T32268 RefSeq:NP_001022113.1
RefSeq:NP_001022114.1 ProteinModelPortal:O17071 SMR:O17071
IntAct:O17071 MINT:MINT-210603 STRING:O17071 PaxDb:O17071
PRIDE:O17071 EnsemblMetazoa:F23F1.8a GeneID:173384
KEGG:cel:CELE_F23F1.8 UCSC:F23F1.8a CTD:173384 WormBase:F23F1.8a
WormBase:F23F1.8b GeneTree:ENSGT00550000074826 InParanoid:O17071
OMA:EHKEVES NextBio:879415 GO:GO:0008540 Uniprot:O17071
Length = 406
Score = 127 (49.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 36/111 (32%), Positives = 61/111 (54%)
Query: 20 LLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFNK 79
LL GPPGTGKT L +AVA +L F+++ S ++ KY ES +++++MFN
Sbjct: 188 LLFGPPGTGKTLLARAVASQLDCN---------FLKVVSSAIVDKYIGESARMIREMFNY 238
Query: 80 IKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV-RVVNAVLTQID 129
++ ++ +V +DEI+++ R S GT + R + +L Q+D
Sbjct: 239 ARD---HQPCIV--FMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQLD 282
>WB|WBGene00021334 [details] [associations]
symbol:vps-4 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0006310 "DNA recombination" evidence=IEA] [GO:0009378 "four-way
junction helicase activity" evidence=IEA] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] [GO:0043652 "engulfment of
apoptotic cell" evidence=IMP] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0002119 GO:GO:0018996
GO:GO:0040011 GO:GO:0000003 Pfam:PF04212 eggNOG:COG0464
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 GO:GO:0043652
SMART:SM00745 GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146
KO:K12196 OMA:AKCAEYL EMBL:FO080952 RefSeq:NP_490816.4
ProteinModelPortal:Q9BL83 SMR:Q9BL83 IntAct:Q9BL83
MINT:MINT-6670337 STRING:Q9BL83 PaxDb:Q9BL83
EnsemblMetazoa:Y34D9A.10.1 EnsemblMetazoa:Y34D9A.10.2 GeneID:189590
KEGG:cel:CELE_Y34D9A.10 UCSC:Y34D9A.10 CTD:189590
WormBase:Y34D9A.10 InParanoid:Q9BL83 NextBio:942940 Uniprot:Q9BL83
Length = 430
Score = 127 (49.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 36/87 (41%), Positives = 51/87 (58%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LL GPPGTGK+ + KAVA + +S F I+S L SK+ ES KLV+ +F
Sbjct: 154 ILLFGPPGTGKSYIAKAVATEAG---EST-----FFSISSSDLMSKWLGESEKLVKNLFA 205
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRAR 105
+E ++ S++ IDEI+SL AR
Sbjct: 206 LARE---HKPSII--FIDEIDSLCSAR 227
>UNIPROTKB|F1SMW4 [details] [associations]
symbol:VPS4B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0033993 "response to lipid" evidence=IEA] [GO:0032510
"endosome to lysosome transport via multivesicular body sorting
pathway" evidence=IEA] [GO:0032367 "intracellular cholesterol
transport" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0007032
"endosome organization" evidence=IEA] [GO:0006813 "potassium ion
transport" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005774 "vacuolar membrane" evidence=IEA] [GO:0005770 "late
endosome" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005774
GO:GO:0005764 GO:GO:0016887 GO:GO:0032367 GO:GO:0010008
GO:GO:0005770 GO:GO:0006813 GO:GO:0033993 Pfam:PF04212
GO:GO:0007032 GO:GO:0005769 SMART:SM00745
GeneTree:ENSGT00550000074466 GO:GO:0032510 OMA:AKCAEYL
EMBL:CU694588 Ensembl:ENSSSCT00000005399 Uniprot:F1SMW4
Length = 369
Score = 126 (49.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 39/105 (37%), Positives = 56/105 (53%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+KF H W R +LL GPPGTGK+ L KAVA + + + F ++S
Sbjct: 154 IKFPHLFTGKRT-PW-RGILLFGPPGTGKSYLAKAVATEANN--------STFFSVSSSD 203
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRAR 105
L SK+ ES KLV+ +F +E + S++ IDEI+SL +R
Sbjct: 204 LVSKWLGESEKLVKNLFQLAREN---KPSII--FIDEIDSLCGSR 243
>UNIPROTKB|P63345 [details] [associations]
symbol:mpa "Proteasome-associated ATPase" species:1773
"Mycobacterium tuberculosis" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005618 "cell wall" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0010498 "proteasomal protein catabolic process"
evidence=IDA;IMP] [GO:0010499 "proteasomal ubiquitin-independent
protein catabolic process" evidence=IDA] [GO:0016887 "ATPase
activity" evidence=IDA] [GO:0019941 "modification-dependent protein
catabolic process" evidence=IDA;IMP] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0032182 "small conjugating protein binding" evidence=IDA;IPI]
[GO:0043335 "protein unfolding" evidence=IDA] [GO:0051260 "protein
homooligomerization" evidence=IPI] [GO:0051409 "response to
nitrosative stress" evidence=IMP] [GO:0070628 "proteasome binding"
evidence=IPI] [GO:0071732 "cellular response to nitric oxide"
evidence=IMP] HAMAP:MF_02112 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR022482 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005886 GO:GO:0005524 GO:GO:0005618
GO:GO:0009405 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0051260 EMBL:BX842578 GO:GO:0016887
GO:GO:0071732 GO:GO:0051409 eggNOG:COG0464 EMBL:DQ888314 PIR:F70512
RefSeq:NP_216631.1 RefSeq:NP_336644.1 RefSeq:YP_006515531.1
PDB:3FP9 PDB:3M91 PDB:3M9B PDB:3M9D PDB:3M9H PDBsum:3FP9
PDBsum:3M91 PDBsum:3M9B PDBsum:3M9D PDBsum:3M9H
ProteinModelPortal:P63345 SMR:P63345 DIP:DIP-48292N
MINT:MINT-7262409 PRIDE:P63345 EnsemblBacteria:EBMYCT00000003259
EnsemblBacteria:EBMYCT00000070852 GeneID:13316922 GeneID:887297
GeneID:923659 KEGG:mtc:MT2175 KEGG:mtu:Rv2115c KEGG:mtv:RVBD_2115c
PATRIC:18126540 TubercuList:Rv2115c HOGENOM:HOG000245286 KO:K13527
OMA:VFFDEME ProtClustDB:CLSK872012 UniPathway:UPA00997
EvolutionaryTrace:P63345 GO:GO:0022623 GO:GO:0032182 GO:GO:0019941
GO:GO:0010499 GO:GO:0043335 PANTHER:PTHR23073:SF4
TIGRFAMs:TIGR03689 Uniprot:P63345
Length = 609
Score = 129 (50.5 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 38/118 (32%), Positives = 64/118 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLS-----IRLQSKYKITE-FIEINSHSLFSKYFSESGKL 72
VLL+GPPG GKT + KAVA L+ +R ++ F+ I L +K+ E+ +
Sbjct: 289 VLLYGPPGCGKTLIAKAVANSLAKKMAEVRGDDAHEAKSYFLNIKGPELLNKFVGETERH 348
Query: 73 VQKMFNKIKEAVEYEESLVCLLIDEIESLTRARES-VMSGTEPSDGVRVVNAVLTQID 129
++ +F + +E E + V + DE++S+ R R + V S E + VV +L++ID
Sbjct: 349 IRLIFQRAREKAS-EGTPVIVFFDEMDSIFRTRGTGVSSDVETT----VVPQLLSEID 401
>TAIR|locus:2038678 [details] [associations]
symbol:SKD1 "SUPPRESSOR OF K+ TRANSPORT GROWTH DEFECT1"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005737 "cytoplasm" evidence=ISM;IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005771 "multivesicular body"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IMP]
[GO:0016192 "vesicle-mediated transport" evidence=RCA;IMP]
[GO:0005634 "nucleus" evidence=IDA] [GO:0007033 "vacuole
organization" evidence=IMP] [GO:0010091 "trichome branching"
evidence=IMP] [GO:0009506 "plasmodesma" evidence=IDA] [GO:0006623
"protein targeting to vacuole" evidence=RCA] [GO:0006635 "fatty
acid beta-oxidation" evidence=RCA] [GO:0006869 "lipid transport"
evidence=RCA] [GO:0006891 "intra-Golgi vesicle-mediated transport"
evidence=RCA] [GO:0006944 "cellular membrane fusion" evidence=RCA]
[GO:0010351 "lithium ion transport" evidence=RCA] [GO:0016197
"endosomal transport" evidence=RCA] [GO:0016558 "protein import
into peroxisome matrix" evidence=RCA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0009506
GO:GO:0005524 GO:GO:0005634 EMBL:CP002685 GO:GO:0016192
Pfam:PF04212 HSSP:Q01853 GO:GO:0017111 EMBL:AC006232 GO:GO:0007032
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005771 GO:GO:0007033
EMBL:AC005824 GO:GO:0010091 SMART:SM00745 HOGENOM:HOG000225146
UniGene:At.13265 KO:K12196 OMA:FTGKRIP EMBL:AF367297 EMBL:AY091684
IPI:IPI00544233 PIR:F84674 RefSeq:NP_180328.1 SMR:Q9ZNT0
IntAct:Q9ZNT0 STRING:Q9ZNT0 EnsemblPlants:AT2G27600.1 GeneID:817306
KEGG:ath:AT2G27600 TAIR:At2g27600 InParanoid:Q9ZNT0
ProtClustDB:CLSN2683515 Genevestigator:Q9ZNT0 Uniprot:Q9ZNT0
Length = 435
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 35/91 (38%), Positives = 49/91 (53%)
Query: 15 WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQ 74
W R LL+GPPGTGK+ L KAVA + + F ++S L SK+ ES KLV
Sbjct: 165 W-RAFLLYGPPGTGKSYLAKAVATEAD---------STFFSVSSSDLVSKWMGESEKLVS 214
Query: 75 KMFNKIKEAVEYEESLVCLLIDEIESLTRAR 105
+F +E+ S++ +DEI+SL R
Sbjct: 215 NLFEMARESAP---SII--FVDEIDSLCGTR 240
>UNIPROTKB|H0YJS8 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR003959 Pfam:PF00004
GO:GO:0005886 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
EMBL:AL133453 HGNC:HGNC:9553 Ensembl:ENST00000555339 Uniprot:H0YJS8
Length = 195
Score = 119 (46.9 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 26/63 (41%), Positives = 39/63 (61%)
Query: 20 LLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFNK 79
LL+GPPGTGKT L +AVA +L F+++ S S+ KY ES +L+++MFN
Sbjct: 132 LLYGPPGTGKTLLARAVASQLDCN---------FLKVVSSSIVDKYIGESARLIREMFNY 182
Query: 80 IKE 82
++
Sbjct: 183 ARD 185
>UNIPROTKB|G3X8E2 [details] [associations]
symbol:VPS4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0048471 Pfam:PF04212 GO:GO:0017111
InterPro:IPR015415 Pfam:PF09336 SMART:SM00745
GeneTree:ENSGT00550000074466 OMA:VRWNDVA EMBL:DAAA02046699
Ensembl:ENSBTAT00000065503 Uniprot:G3X8E2
Length = 437
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+KF H W R +LL GPPGTGK+ L KAVA + + + F ++S
Sbjct: 147 IKFPHLFTGKRT-PW-RGILLFGPPGTGKSYLAKAVATEANN--------STFFSVSSSD 196
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRAR 105
L SK+ ES KLV+ +F ++ ++ S++ IDE++SL +R
Sbjct: 197 LMSKWLGESEKLVKNLFELARQ---HKPSII--FIDEVDSLCGSR 236
>UNIPROTKB|E2RA71 [details] [associations]
symbol:VPS4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 Pfam:PF04212 GO:GO:0017111 InterPro:IPR015415
Pfam:PF09336 SMART:SM00745 GeneTree:ENSGT00550000074466 OMA:FTGKRIP
EMBL:AAEX03004108 Ensembl:ENSCAFT00000032306 NextBio:20854819
Uniprot:E2RA71
Length = 437
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+KF H W R +LL GPPGTGK+ L KAVA + + + F ++S
Sbjct: 147 IKFPHLFTGKRT-PW-RGILLFGPPGTGKSYLAKAVATEANN--------STFFSVSSSD 196
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRAR 105
L SK+ ES KLV+ +F ++ ++ S++ IDE++SL +R
Sbjct: 197 LMSKWLGESEKLVKNLFELARQ---HKPSII--FIDEVDSLCGSR 236
>UNIPROTKB|Q9UN37 [details] [associations]
symbol:VPS4A "Vacuolar protein sorting-associated protein
4A" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0031902 "late endosome
membrane" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0016192 "vesicle-mediated transport" evidence=IDA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IDA] [GO:0016197 "endosomal transport"
evidence=IMP;TAS] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0042623 "ATPase activity, coupled" evidence=NAS]
[GO:0000910 "cytokinesis" evidence=IDA] [GO:0030496 "midbody"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000815 "ESCRT III complex" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] Reactome:REACT_11123 InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0048471 GO:GO:0016192 GO:GO:0031902
GO:GO:0015031 GO:GO:0016197 GO:GO:0007049 GO:GO:0000910
Pfam:PF04212 eggNOG:COG0464 GO:GO:0030496 EMBL:CH471092
InterPro:IPR015415 Pfam:PF09336 GO:GO:0016044 HOVERGEN:HBG057074
GO:GO:0042623 SMART:SM00745 PDB:2JQ9 PDBsum:2JQ9 PDB:2K3W
PDBsum:2K3W HOGENOM:HOG000225146 EMBL:AF255952 EMBL:AF282903
EMBL:AF132747 EMBL:AF159063 EMBL:AF112215 EMBL:AK315026
EMBL:BC047932 EMBL:AF155740 IPI:IPI00411356 RefSeq:NP_037377.1
UniGene:Hs.128420 PDB:1YXR PDBsum:1YXR ProteinModelPortal:Q9UN37
SMR:Q9UN37 IntAct:Q9UN37 STRING:Q9UN37 PhosphoSite:Q9UN37
DMDM:62511240 PaxDb:Q9UN37 PRIDE:Q9UN37 DNASU:27183
Ensembl:ENST00000254950 GeneID:27183 KEGG:hsa:27183 UCSC:uc002eww.3
CTD:27183 GeneCards:GC16P069335 HGNC:HGNC:13488 HPA:CAB018751
MIM:609982 neXtProt:NX_Q9UN37 PharmGKB:PA38362 InParanoid:Q9UN37
KO:K12196 OMA:FTGKRIP OrthoDB:EOG4G1MGD ChiTaRS:VPS4A
EvolutionaryTrace:Q9UN37 GenomeRNAi:27183 NextBio:50017
ArrayExpress:Q9UN37 Bgee:Q9UN37 CleanEx:HS_VPS4A
Genevestigator:Q9UN37 GermOnline:ENSG00000132612 Uniprot:Q9UN37
Length = 437
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+KF H W R +LL GPPGTGK+ L KAVA + + + F ++S
Sbjct: 147 IKFPHLFTGKRT-PW-RGILLFGPPGTGKSYLAKAVATEANN--------STFFSVSSSD 196
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRAR 105
L SK+ ES KLV+ +F ++ ++ S++ IDE++SL +R
Sbjct: 197 LMSKWLGESEKLVKNLFELARQ---HKPSII--FIDEVDSLCGSR 236
>UNIPROTKB|I3LL27 [details] [associations]
symbol:VPS4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0048471 Pfam:PF04212 GO:GO:0017111
InterPro:IPR015415 Pfam:PF09336 SMART:SM00745
GeneTree:ENSGT00550000074466 CTD:27183 KO:K12196 OMA:VRWNDVA
EMBL:FP015939 EMBL:FP325157 RefSeq:NP_001230347.1 UniGene:Ssc.15717
Ensembl:ENSSSCT00000026219 GeneID:100627841 KEGG:ssc:100627841
Uniprot:I3LL27
Length = 437
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+KF H W R +LL GPPGTGK+ L KAVA + + + F ++S
Sbjct: 147 IKFPHLFTGKRT-PW-RGILLFGPPGTGKSYLAKAVATEANN--------STFFSVSSSD 196
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRAR 105
L SK+ ES KLV+ +F ++ ++ S++ IDE++SL +R
Sbjct: 197 LMSKWLGESEKLVKNLFELARQ---HKPSII--FIDEVDSLCGSR 236
>MGI|MGI:1890520 [details] [associations]
symbol:Vps4a "vacuolar protein sorting 4a (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005768
"endosome" evidence=IEA] [GO:0005769 "early endosome" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=ISO] [GO:0016197 "endosomal transport"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017048 "Rho GTPase binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0030496
"midbody" evidence=ISO] [GO:0048471 "perinuclear region of
cytoplasm" evidence=ISO;IDA] [GO:0051301 "cell division"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:1890520 GO:GO:0005524 GO:GO:0048471
GO:GO:0051301 GO:GO:0016192 GO:GO:0031902 GO:GO:0015031
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005769 HOVERGEN:HBG057074
SMART:SM00745 GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146
CTD:27183 KO:K12196 OrthoDB:EOG4G1MGD EMBL:AF530161 EMBL:AK047821
EMBL:AK159117 EMBL:BC018368 IPI:IPI00312172 RefSeq:NP_569053.1
UniGene:Mm.236004 ProteinModelPortal:Q8VEJ9 SMR:Q8VEJ9
STRING:Q8VEJ9 PhosphoSite:Q8VEJ9 PaxDb:Q8VEJ9 PRIDE:Q8VEJ9
Ensembl:ENSMUST00000034388 GeneID:116733 KEGG:mmu:116733
UCSC:uc009ngv.1 InParanoid:Q8VEJ9 OMA:VRWNDVA NextBio:369058
Bgee:Q8VEJ9 CleanEx:MM_VPS4A Genevestigator:Q8VEJ9
GermOnline:ENSMUSG00000031913 Uniprot:Q8VEJ9
Length = 437
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+KF H W R +LL GPPGTGK+ L KAVA + + + F ++S
Sbjct: 147 IKFPHLFTGKRT-PW-RGILLFGPPGTGKSYLAKAVATEANN--------STFFSVSSSD 196
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRAR 105
L SK+ ES KLV+ +F ++ ++ S++ IDE++SL +R
Sbjct: 197 LMSKWLGESEKLVKNLFELARQ---HKPSII--FIDEVDSLCGSR 236
>RGD|628810 [details] [associations]
symbol:Vps4a "vacuolar protein sorting 4 homolog A (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0000910
"cytokinesis" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005769 "early endosome"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0008022
"protein C-terminus binding" evidence=ISO] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=ISO] [GO:0016197 "endosomal transport" evidence=IC;ISO]
[GO:0017048 "Rho GTPase binding" evidence=IPI] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0019904
"protein domain specific binding" evidence=ISO] [GO:0030496
"midbody" evidence=ISO] [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA;ISO] [GO:0051301 "cell division" evidence=IEA]
[GO:0000815 "ESCRT III complex" evidence=ISO] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:628810 GO:GO:0005524
GO:GO:0051301 GO:GO:0031902 GO:GO:0015031 GO:GO:0016197
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111 HSSP:O75351
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005769 HOVERGEN:HBG057074
SMART:SM00745 GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146
CTD:27183 KO:K12196 OrthoDB:EOG4G1MGD EMBL:AB076398 IPI:IPI00204016
RefSeq:NP_663711.1 UniGene:Rn.12477 ProteinModelPortal:Q793F9
SMR:Q793F9 STRING:Q793F9 PhosphoSite:Q793F9 PRIDE:Q793F9
Ensembl:ENSRNOT00000027607 GeneID:246772 KEGG:rno:246772
UCSC:RGD:628810 NextBio:623855 ArrayExpress:Q793F9
Genevestigator:Q793F9 Uniprot:Q793F9
Length = 437
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+KF H W R +LL GPPGTGK+ L KAVA + + + F ++S
Sbjct: 147 IKFPHLFTGKRT-PW-RGILLFGPPGTGKSYLAKAVATEANN--------STFFSVSSSD 196
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRAR 105
L SK+ ES KLV+ +F ++ ++ S++ IDE++SL +R
Sbjct: 197 LMSKWLGESEKLVKNLFELARQ---HKPSII--FIDEVDSLCGSR 236
>UNIPROTKB|Q793F9 [details] [associations]
symbol:Vps4a "Vacuolar protein sorting-associated protein
4A" species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:628810 GO:GO:0005524 GO:GO:0051301 GO:GO:0031902
GO:GO:0015031 GO:GO:0016197 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0017111 HSSP:O75351 InterPro:IPR015415
Pfam:PF09336 GO:GO:0005769 HOVERGEN:HBG057074 SMART:SM00745
GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146 CTD:27183
KO:K12196 OrthoDB:EOG4G1MGD EMBL:AB076398 IPI:IPI00204016
RefSeq:NP_663711.1 UniGene:Rn.12477 ProteinModelPortal:Q793F9
SMR:Q793F9 STRING:Q793F9 PhosphoSite:Q793F9 PRIDE:Q793F9
Ensembl:ENSRNOT00000027607 GeneID:246772 KEGG:rno:246772
UCSC:RGD:628810 NextBio:623855 ArrayExpress:Q793F9
Genevestigator:Q793F9 Uniprot:Q793F9
Length = 437
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 37/105 (35%), Positives = 57/105 (54%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+KF H W R +LL GPPGTGK+ L KAVA + + + F ++S
Sbjct: 147 IKFPHLFTGKRT-PW-RGILLFGPPGTGKSYLAKAVATEANN--------STFFSVSSSD 196
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRAR 105
L SK+ ES KLV+ +F ++ ++ S++ IDE++SL +R
Sbjct: 197 LMSKWLGESEKLVKNLFELARQ---HKPSII--FIDEVDSLCGSR 236
>SGD|S000005995 [details] [associations]
symbol:YTA6 "Putative ATPase of the CDC48/PAS1/SEC18 (AAA)
family" species:4932 "Saccharomyces cerevisiae" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005938 "cell cortex" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000005995
GO:GO:0005524 GO:GO:0005938 GO:GO:0016887 EMBL:BK006949
eggNOG:COG0464 EMBL:U41849 GeneTree:ENSGT00570000078874 EMBL:M14145
EMBL:X81071 PIR:S61113 RefSeq:NP_015251.1 ProteinModelPortal:P40328
SMR:P40328 DIP:DIP-4025N IntAct:P40328 MINT:MINT-546593
STRING:P40328 PaxDb:P40328 PRIDE:P40328 EnsemblFungi:YPL074W
GeneID:856031 KEGG:sce:YPL074W CYGD:YPL074w HOGENOM:HOG000066024
OMA:QDIRIAR OrthoDB:EOG4SN4XK NextBio:980956 Genevestigator:P40328
GermOnline:YPL074W Uniprot:P40328
Length = 754
Score = 130 (50.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 36/89 (40%), Positives = 51/89 (57%)
Query: 17 RVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKM 76
R +LL GPPGTGKT + KAVA + + + F +++ SL SKY ES KLV+ +
Sbjct: 505 RGMLLFGPPGTGKTMIAKAVATESN---------STFFSVSASSLLSKYLGESEKLVRAL 555
Query: 77 FNKIKEAVEYEESLVCLLIDEIESLTRAR 105
F K+ S++ IDEI+S+ AR
Sbjct: 556 FYMAKKL---SPSII--FIDEIDSMLTAR 579
>UNIPROTKB|H0YJC0 [details] [associations]
symbol:PSMC6 "26S protease regulatory subunit 10B"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0017111
EMBL:AL133453 HGNC:HGNC:9553 Ensembl:ENST00000556813 Uniprot:H0YJC0
Length = 262
Score = 123 (48.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 29/82 (35%), Positives = 50/82 (60%)
Query: 20 LLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFNK 79
LL+GPPGTGKT L +AVA +L F+++ S S+ KY ES +L+++MFN
Sbjct: 171 LLYGPPGTGKTLLARAVASQLDCN---------FLKVVSSSIVDKYIGESARLIREMFNY 221
Query: 80 IKEAVEYEESLVCLLIDEIESL 101
++ ++ ++ +DEI+++
Sbjct: 222 ARD---HQPCII--FMDEIDAI 238
>UNIPROTKB|Q0VD48 [details] [associations]
symbol:VPS4B "Vacuolar protein sorting-associated protein
4B" species:9913 "Bos taurus" [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0033993 "response to lipid" evidence=IEA]
[GO:0032510 "endosome to lysosome transport via multivesicular body
sorting pathway" evidence=IEA] [GO:0032367 "intracellular
cholesterol transport" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0007032 "endosome organization" evidence=IEA]
[GO:0006813 "potassium ion transport" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005774 "vacuolar membrane"
evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0051301
"cell division" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005774
GO:GO:0051301 GO:GO:0031902 GO:GO:0015031 GO:GO:0005764
GO:GO:0016887 GO:GO:0032367 GO:GO:0006813 GO:GO:0033993
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0007032
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005769 HOVERGEN:HBG057074
SMART:SM00745 GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146
GO:GO:0032510 KO:K12196 OrthoDB:EOG4G1MGD EMBL:BC119836
IPI:IPI00715440 RefSeq:NP_001069624.1 UniGene:Bt.62714
ProteinModelPortal:Q0VD48 SMR:Q0VD48 STRING:Q0VD48 PRIDE:Q0VD48
Ensembl:ENSBTAT00000013862 GeneID:539357 KEGG:bta:539357 CTD:9525
InParanoid:Q0VD48 OMA:AKCAEYL NextBio:20877936 Uniprot:Q0VD48
Length = 444
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 40/105 (38%), Positives = 56/105 (53%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+KF H W R +LL GPPGTGK+ L KAVA + + + F I+S
Sbjct: 154 IKFPHLFTGKRT-PW-RGILLFGPPGTGKSYLAKAVATEANN--------STFFSISSSD 203
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRAR 105
L SK+ ES KLV+ +F +E + S++ IDEI+SL +R
Sbjct: 204 LVSKWLGESEKLVKNLFQLAREN---KPSII--FIDEIDSLCGSR 243
>UNIPROTKB|F1PVE5 [details] [associations]
symbol:VPS4B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 Pfam:PF04212 GO:GO:0017111 InterPro:IPR015415
Pfam:PF09336 SMART:SM00745 GeneTree:ENSGT00550000074466 KO:K12196
CTD:9525 OMA:AKCAEYL EMBL:AAEX03000082 RefSeq:XP_848812.1
Ensembl:ENSCAFT00000000116 GeneID:607306 KEGG:cfa:607306
Uniprot:F1PVE5
Length = 444
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 40/105 (38%), Positives = 56/105 (53%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+KF H W R +LL GPPGTGK+ L KAVA + + + F I+S
Sbjct: 154 IKFPHLFTGKRT-PW-RGILLFGPPGTGKSYLAKAVATEANN--------STFFSISSSD 203
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRAR 105
L SK+ ES KLV+ +F +E + S++ IDEI+SL +R
Sbjct: 204 LVSKWLGESEKLVKNLFQLAREN---KPSII--FIDEIDSLCGSR 243
>UNIPROTKB|O75351 [details] [associations]
symbol:VPS4B "Vacuolar protein sorting-associated protein
4B" species:9606 "Homo sapiens" [GO:0007049 "cell cycle"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0006813 "potassium
ion transport" evidence=IEA] [GO:0007032 "endosome organization"
evidence=IEA] [GO:0031902 "late endosome membrane" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IDA;IMP] [GO:0005764
"lysosome" evidence=IDA] [GO:0005769 "early endosome" evidence=IDA]
[GO:0005770 "late endosome" evidence=IDA] [GO:0016197 "endosomal
transport" evidence=IDA;IMP;TAS] [GO:0006200 "ATP catabolic
process" evidence=IMP] [GO:0005524 "ATP binding" evidence=IMP]
[GO:0005515 "protein binding" evidence=IPI] [GO:0032510 "endosome
to lysosome transport via multivesicular body sorting pathway"
evidence=IMP] [GO:0033993 "response to lipid" evidence=IDA]
[GO:0010008 "endosome membrane" evidence=IDA] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0042623 "ATPase activity,
coupled" evidence=NAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA;TAS] [GO:0005774 "vacuolar membrane" evidence=IDA]
[GO:0032367 "intracellular cholesterol transport" evidence=IMP]
[GO:0005768 "endosome" evidence=IDA] [GO:0016044 "cellular membrane
organization" evidence=TAS] Reactome:REACT_11123 InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0005634 GO:GO:0005774 GO:GO:0051301
GO:GO:0031902 GO:GO:0015031 GO:GO:0005764 GO:GO:0032367
GO:GO:0010008 GO:GO:0005770 GO:GO:0006813 GO:GO:0033993
GO:GO:0007049 Pfam:PF04212 eggNOG:COG0464 GO:GO:0007032
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005769 GO:GO:0016044
HOVERGEN:HBG057074 GO:GO:0042623 EMBL:CH471096 SMART:SM00745
PDB:2JQK PDBsum:2JQK HOGENOM:HOG000225146 GO:GO:0032510 KO:K12196
OrthoDB:EOG4G1MGD CTD:9525 OMA:AKCAEYL EMBL:AF195514 EMBL:AF282904
EMBL:AF038960 EMBL:AY232629 EMBL:BC039574 IPI:IPI00182728
RefSeq:NP_004860.2 UniGene:Hs.126550 PDB:1WR0 PDB:1XWI PDB:2CPT
PDB:2JQH PDBsum:1WR0 PDBsum:1XWI PDBsum:2CPT PDBsum:2JQH
ProteinModelPortal:O75351 SMR:O75351 IntAct:O75351 STRING:O75351
PhosphoSite:O75351 PaxDb:O75351 PeptideAtlas:O75351 PRIDE:O75351
DNASU:9525 Ensembl:ENST00000238497 GeneID:9525 KEGG:hsa:9525
UCSC:uc002lix.3 GeneCards:GC18M061056 HGNC:HGNC:10895 HPA:CAB046445
MIM:609983 neXtProt:NX_O75351 PharmGKB:PA35795 InParanoid:O75351
PhylomeDB:O75351 EvolutionaryTrace:O75351 GenomeRNAi:9525
NextBio:35700 Bgee:O75351 CleanEx:HS_VPS4B Genevestigator:O75351
GermOnline:ENSG00000119541 Uniprot:O75351
Length = 444
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 40/105 (38%), Positives = 56/105 (53%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+KF H W R +LL GPPGTGK+ L KAVA + + + F I+S
Sbjct: 154 IKFPHLFTGKRT-PW-RGILLFGPPGTGKSYLAKAVATEANN--------STFFSISSSD 203
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRAR 105
L SK+ ES KLV+ +F +E + S++ IDEI+SL +R
Sbjct: 204 LVSKWLGESEKLVKNLFQLAREN---KPSII--FIDEIDSLCGSR 243
>MGI|MGI:1100499 [details] [associations]
symbol:Vps4b "vacuolar protein sorting 4b (yeast)"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005764
"lysosome" evidence=ISO] [GO:0005768 "endosome" evidence=ISO]
[GO:0005769 "early endosome" evidence=ISO] [GO:0005770 "late
endosome" evidence=ISO] [GO:0005774 "vacuolar membrane"
evidence=ISO] [GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IDA]
[GO:0007032 "endosome organization" evidence=IMP] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0010008 "endosome membrane" evidence=ISO]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030301
"cholesterol transport" evidence=IMP] [GO:0032367 "intracellular
cholesterol transport" evidence=ISO] [GO:0032510 "endosome to
lysosome transport via multivesicular body sorting pathway"
evidence=ISO] [GO:0033993 "response to lipid" evidence=ISO]
[GO:0051301 "cell division" evidence=IEA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:1100499
GO:GO:0005829 GO:GO:0005524 GO:GO:0005634 GO:GO:0005774
GO:GO:0051301 GO:GO:0031902 GO:GO:0015031 GO:GO:0005768
GO:GO:0005764 GO:GO:0016887 GO:GO:0016197 GO:GO:0032367
GO:GO:0006813 GO:GO:0033993 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0007032 InterPro:IPR015415 Pfam:PF09336
GO:GO:0005769 GO:GO:0030301 HOVERGEN:HBG057074 SMART:SM00745
HOGENOM:HOG000225146 GO:GO:0032510 KO:K12196 OrthoDB:EOG4G1MGD
CTD:9525 OMA:AKCAEYL EMBL:U10119 EMBL:AF134119 EMBL:BC003799
IPI:IPI00133700 PIR:S48696 RefSeq:NP_033216.2 UniGene:Mm.18705
UniGene:Mm.483448 PDB:2ZAM PDB:2ZAN PDB:2ZAO PDBsum:2ZAM
PDBsum:2ZAN PDBsum:2ZAO ProteinModelPortal:P46467 SMR:P46467
STRING:P46467 PhosphoSite:P46467 PaxDb:P46467 PRIDE:P46467
Ensembl:ENSMUST00000094646 Ensembl:ENSMUST00000112736 GeneID:20479
KEGG:mmu:20479 InParanoid:P46467 EvolutionaryTrace:P46467
NextBio:298605 Bgee:P46467 CleanEx:MM_VPS4B Genevestigator:P46467
GermOnline:ENSMUSG00000009907 Uniprot:P46467
Length = 444
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 40/105 (38%), Positives = 56/105 (53%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+KF H W R +LL GPPGTGK+ L KAVA + + + F I+S
Sbjct: 154 IKFPHLFTGKRT-PW-RGILLFGPPGTGKSYLAKAVATEANN--------STFFSISSSD 203
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRAR 105
L SK+ ES KLV+ +F +E + S++ IDEI+SL +R
Sbjct: 204 LVSKWLGESEKLVKNLFQLAREN---KPSII--FIDEIDSLCGSR 243
>RGD|1305969 [details] [associations]
symbol:Vps4b "vacuolar protein sorting 4 homolog B (S.
cerevisiae)" species:10116 "Rattus norvegicus" [GO:0003674
"molecular_function" evidence=ND] [GO:0005524 "ATP binding"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005764 "lysosome" evidence=IEA;ISO] [GO:0005768
"endosome" evidence=ISO] [GO:0005769 "early endosome"
evidence=IEA;ISO] [GO:0005770 "late endosome" evidence=IEA;ISO]
[GO:0005774 "vacuolar membrane" evidence=IEA;ISO] [GO:0005829
"cytosol" evidence=IEA;ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006813 "potassium ion transport"
evidence=IEA;ISO] [GO:0007032 "endosome organization"
evidence=IEA;ISO] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0008150 "biological_process" evidence=ND]
[GO:0010008 "endosome membrane" evidence=IEA;ISO] [GO:0016197
"endosomal transport" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=IEA;ISO] [GO:0030301 "cholesterol transport" evidence=ISO]
[GO:0032367 "intracellular cholesterol transport" evidence=IEA;ISO]
[GO:0032510 "endosome to lysosome transport via multivesicular body
sorting pathway" evidence=IEA;ISO] [GO:0033993 "response to lipid"
evidence=IEA;ISO] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 RGD:1305969 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005774 GO:GO:0005764 GO:GO:0016887 GO:GO:0032367
GO:GO:0010008 GO:GO:0005770 GO:GO:0006813 GO:GO:0033993
Pfam:PF04212 eggNOG:COG0464 GO:GO:0007032 InterPro:IPR015415
Pfam:PF09336 GO:GO:0005769 HOVERGEN:HBG057074 SMART:SM00745
GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146 GO:GO:0032510
EMBL:CH474000 KO:K12196 OrthoDB:EOG4G1MGD CTD:9525 EMBL:BC099128
IPI:IPI00363819 RefSeq:NP_001020887.1 UniGene:Rn.25893 SMR:Q4KLL7
STRING:Q4KLL7 Ensembl:ENSRNOT00000003715 GeneID:360834
KEGG:rno:360834 UCSC:RGD:1305969 InParanoid:Q4KLL7 OMA:XKRTPWR
NextBio:674292 Genevestigator:Q4KLL7 Uniprot:Q4KLL7
Length = 444
Score = 127 (49.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 40/105 (38%), Positives = 56/105 (53%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+KF H W R +LL GPPGTGK+ L KAVA + + + F I+S
Sbjct: 154 IKFPHLFTGKRT-PW-RGILLFGPPGTGKSYLAKAVATEANN--------STFFSISSSD 203
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRAR 105
L SK+ ES KLV+ +F +E + S++ IDEI+SL +R
Sbjct: 204 LVSKWLGESEKLVKNLFQLAREN---KPSII--FIDEIDSLCGSR 243
>FB|FBgn0016983 [details] [associations]
symbol:smid "smallminded" species:7227 "Drosophila
melanogaster" [GO:0016887 "ATPase activity" evidence=ISS;NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:AE014296 GO:GO:0022008 GO:GO:0016887 HSSP:Q01853
KO:K14571 GeneTree:ENSGT00570000079239 UniGene:Dm.875 GeneID:38824
KEGG:dme:Dmel_CG8571 CTD:38824 FlyBase:FBgn0016983 GenomeRNAi:38824
NextBio:810567 RefSeq:NP_523959.2 ProteinModelPortal:Q9VS62
SMR:Q9VS62 IntAct:Q9VS62 MINT:MINT-754496 STRING:Q9VS62
PRIDE:Q9VS62 EnsemblMetazoa:FBtr0076851 UCSC:CG8571-RA
InParanoid:Q9VS62 OMA:EFDSLCP PhylomeDB:Q9VS62 ArrayExpress:Q9VS62
Bgee:Q9VS62 Uniprot:Q9VS62
Length = 944
Score = 131 (51.2 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 38/117 (32%), Positives = 58/117 (49%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL GPPG GKT L KA+A + I FI + L + Y ES + V+ F
Sbjct: 699 VLLCGPPGCGKTLLAKAIANEAGIN---------FISVKGPELMNMYVGESERAVRACFQ 749
Query: 79 KIKEAVEYEESLVCLLI-DEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKKK 134
+ + S C++ DE +SL R G + G R+VN +LT++D ++++
Sbjct: 750 RARN------SAPCVIFFDEFDSLCPKRSD--GGDGNNSGTRIVNQLLTEMDGVEER 798
>UNIPROTKB|E2RM61 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 GeneTree:ENSGT00550000074947
EMBL:AAEX03006359 ProteinModelPortal:E2RM61 PRIDE:E2RM61
Ensembl:ENSCAFT00000020231 OMA:DSNCELQ NextBio:20855489
Uniprot:E2RM61
Length = 251
Score = 122 (48.0 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L +AVA FI ++ L K+ E ++V+++F
Sbjct: 137 VLLYGPPGTGKTLLARAVAHHTDCT---------FIRVSGSELVQKFIGEGARMVRELFV 187
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
+E + S++ +DEI+S+ +R SG + S+ R + +L Q+D
Sbjct: 188 MARE---HAPSII--FMDEIDSIGSSRLEGGSGGD-SEVQRTMLELLNQLD 232
>UNIPROTKB|F6QV99 [details] [associations]
symbol:ATAD1 "ATPase family AAA domain-containing protein
1" species:9913 "Bos taurus" [GO:0045211 "postsynaptic membrane"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=ISS] [GO:0007613 "memory" evidence=ISS]
[GO:0007612 "learning" evidence=ISS] [GO:0002092 "positive
regulation of receptor internalization" evidence=ISS] [GO:0005778
"peroxisomal membrane" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005886 GO:GO:0005524 GO:GO:0051967
GO:GO:0007613 GO:GO:0030054 GO:GO:0045211 GO:GO:0007612
GO:GO:0016887 GO:GO:0005778 GO:GO:0002092 EMBL:DAAA02058710
EMBL:BC151346 IPI:IPI00706878 RefSeq:NP_001192510.1 UniGene:Bt.8053
GeneID:506045 KEGG:bta:506045 CTD:84896 HOGENOM:HOG000225141
Uniprot:F6QV99
Length = 361
Score = 125 (49.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 36/107 (33%), Positives = 56/107 (52%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+K H S ++ + VLL+GPPG GKT + KA A++ R FI + +
Sbjct: 111 IKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCR---------FINLQPST 161
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARES 107
L K++ ES KL +F+ A++ + S++ IDEI+S R R S
Sbjct: 162 LTDKWYGESQKLAAAVFSL---AIKLQPSII--FIDEIDSFLRNRSS 203
>UNIPROTKB|Q8NBU5 [details] [associations]
symbol:ATAD1 "ATPase family AAA domain-containing protein
1" species:9606 "Homo sapiens" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0002092 "positive regulation of
receptor internalization" evidence=ISS] [GO:0007612 "learning"
evidence=ISS] [GO:0007613 "memory" evidence=ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045211 "postsynaptic membrane"
evidence=ISS] [GO:0005778 "peroxisomal membrane" evidence=IDA]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005886 GO:GO:0005524 GO:GO:0051967
GO:GO:0007613 GO:GO:0030054 GO:GO:0045211 GO:GO:0007612
EMBL:CH471066 GO:GO:0016887 GO:GO:0005778 eggNOG:COG0464
GO:GO:0002092 CTD:84896 EMBL:AF361493 EMBL:AK027506 EMBL:AK075223
EMBL:AL133327 EMBL:AC022016 EMBL:BC010868 EMBL:BC063530
EMBL:BC073998 EMBL:AL834370 IPI:IPI00171445 IPI:IPI00929553
RefSeq:NP_116199.2 UniGene:Hs.435948 ProteinModelPortal:Q8NBU5
SMR:Q8NBU5 IntAct:Q8NBU5 STRING:Q8NBU5 PhosphoSite:Q8NBU5
DMDM:74762551 PaxDb:Q8NBU5 PeptideAtlas:Q8NBU5 PRIDE:Q8NBU5
Ensembl:ENST00000308448 Ensembl:ENST00000328142
Ensembl:ENST00000541004 GeneID:84896 KEGG:hsa:84896 UCSC:uc001key.1
GeneCards:GC10M089502 HGNC:HGNC:25903 HPA:HPA037569 MIM:614452
neXtProt:NX_Q8NBU5 PharmGKB:PA134914940 HOVERGEN:HBG057074
InParanoid:Q8NBU5 OMA:KNENXDR OrthoDB:EOG412M5T PhylomeDB:Q8NBU5
ChiTaRS:ATAD1 GenomeRNAi:84896 NextBio:75244 ArrayExpress:Q8NBU5
Bgee:Q8NBU5 CleanEx:HS_ATAD1 Genevestigator:Q8NBU5
GermOnline:ENSG00000138138 Uniprot:Q8NBU5
Length = 361
Score = 125 (49.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 36/107 (33%), Positives = 56/107 (52%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+K H S ++ + VLL+GPPG GKT + KA A++ R FI + +
Sbjct: 111 IKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCR---------FINLQPST 161
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARES 107
L K++ ES KL +F+ A++ + S++ IDEI+S R R S
Sbjct: 162 LTDKWYGESQKLAAAVFSL---AIKLQPSII--FIDEIDSFLRNRSS 203
>MGI|MGI:1915229 [details] [associations]
symbol:Atad1 "ATPase family, AAA domain containing 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0002092 "positive regulation of receptor
internalization" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0007612 "learning"
evidence=IMP] [GO:0007613 "memory" evidence=IMP] [GO:0016020
"membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030054 "cell junction" evidence=IEA] [GO:0045202 "synapse"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IDA]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
MGI:MGI:1915229 GO:GO:0005739 GO:GO:0005886 GO:GO:0005524
GO:GO:0051967 GO:GO:0007613 GO:GO:0030054 GO:GO:0045211
GO:GO:0007612 GO:GO:0016887 GO:GO:0005778 eggNOG:COG0464
GO:GO:0002092 CTD:84896 HOGENOM:HOG000225141 HOVERGEN:HBG057074
OMA:KNENXDR OrthoDB:EOG412M5T ChiTaRS:ATAD1 EMBL:AK009419
EMBL:AK014967 EMBL:AK030719 EMBL:AK033639 EMBL:AK150469
EMBL:AK152059 EMBL:AK165953 EMBL:BC029085 EMBL:BC043051
IPI:IPI00108410 RefSeq:NP_080763.2 UniGene:Mm.27123
ProteinModelPortal:Q9D5T0 SMR:Q9D5T0 IntAct:Q9D5T0
PhosphoSite:Q9D5T0 PaxDb:Q9D5T0 PRIDE:Q9D5T0
Ensembl:ENSMUST00000070210 GeneID:67979 KEGG:mmu:67979
UCSC:uc008hfo.1 GeneTree:ENSGT00550000074823 InParanoid:Q9D5T0
NextBio:326122 Bgee:Q9D5T0 CleanEx:MM_ATAD1 Genevestigator:Q9D5T0
GermOnline:ENSMUSG00000013662 Uniprot:Q9D5T0
Length = 361
Score = 125 (49.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 36/107 (33%), Positives = 56/107 (52%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+K H S ++ + VLL+GPPG GKT + KA A++ R FI + +
Sbjct: 111 IKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCR---------FINLQPST 161
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARES 107
L K++ ES KL +F+ A++ + S++ IDEI+S R R S
Sbjct: 162 LTDKWYGESQKLAAAVFSL---AIKLQPSII--FIDEIDSFLRNRSS 203
>RGD|1308570 [details] [associations]
symbol:Atad1 "ATPase family, AAA domain containing 1"
species:10116 "Rattus norvegicus" [GO:0002092 "positive regulation
of receptor internalization" evidence=ISO;ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005778
"peroxisomal membrane" evidence=IEA;ISO] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0007612 "learning" evidence=ISO;ISS] [GO:0007613
"memory" evidence=ISO;ISS] [GO:0016887 "ATPase activity"
evidence=ISO;ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=ISO;ISS] [GO:0051967 "negative
regulation of synaptic transmission, glutamatergic"
evidence=ISO;ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:1308570 GO:GO:0005886 GO:GO:0005524 GO:GO:0005777 GO:GO:0051967
GO:GO:0007613 GO:GO:0030054 GO:GO:0045211 GO:GO:0007612
GO:GO:0016887 eggNOG:COG0464 GO:GO:0002092 CTD:84896
HOGENOM:HOG000225141 HOVERGEN:HBG057074 OMA:KNENXDR
GeneTree:ENSGT00550000074823 EMBL:BC094514 EMBL:EF688601
IPI:IPI00566676 RefSeq:NP_001030174.1 UniGene:Rn.54918
ProteinModelPortal:Q505J9 IntAct:Q505J9 PhosphoSite:Q505J9
PRIDE:Q505J9 Ensembl:ENSRNOT00000014684 GeneID:309532
KEGG:rno:309532 UCSC:RGD:1308570 NextBio:660942 ArrayExpress:Q505J9
Genevestigator:Q505J9 GermOnline:ENSRNOG00000010861 Uniprot:Q505J9
Length = 361
Score = 125 (49.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 36/107 (33%), Positives = 56/107 (52%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+K H S ++ + VLL+GPPG GKT + KA A++ R FI + +
Sbjct: 111 IKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCR---------FINLQPST 161
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARES 107
L K++ ES KL +F+ A++ + S++ IDEI+S R R S
Sbjct: 162 LTDKWYGESQKLAAAVFSL---AIKLQPSII--FIDEIDSFLRNRSS 203
>UNIPROTKB|F2Z5H2 [details] [associations]
symbol:ATAD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=IEA] [GO:0045211 "postsynaptic membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0007613 "memory" evidence=IEA] [GO:0007612 "learning"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0002092 "positive
regulation of receptor internalization" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0051967 GO:GO:0007613
GO:GO:0045211 GO:GO:0007612 GO:GO:0016887 GO:GO:0005778
GO:GO:0002092 OMA:KNENXDR GeneTree:ENSGT00550000074823
EMBL:CT827875 Ensembl:ENSSSCT00000011423 Uniprot:F2Z5H2
Length = 365
Score = 125 (49.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 36/107 (33%), Positives = 56/107 (52%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+K H S ++ + VLL+GPPG GKT + KA A++ R FI + +
Sbjct: 115 IKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCR---------FINLQPST 165
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARES 107
L K++ ES KL +F+ A++ + S++ IDEI+S R R S
Sbjct: 166 LTDKWYGESQKLAAAVFSL---AIKLQPSII--FIDEIDSFLRNRSS 207
>UNIPROTKB|E2RHY1 [details] [associations]
symbol:ATAD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051967 "negative regulation of synaptic
transmission, glutamatergic" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] [GO:0007613 "memory" evidence=IEA] [GO:0007612
"learning" evidence=IEA] [GO:0005778 "peroxisomal membrane"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0002092
"positive regulation of receptor internalization" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005739 GO:GO:0005524 GO:GO:0051967
GO:GO:0007613 GO:GO:0045211 GO:GO:0007612 GO:GO:0016887
GO:GO:0005778 GO:GO:0002092 GeneTree:ENSGT00550000074823
EMBL:AAEX03014938 ProteinModelPortal:E2RHY1 PRIDE:E2RHY1
Ensembl:ENSCAFT00000024819 NextBio:20853036 Uniprot:E2RHY1
Length = 369
Score = 125 (49.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 36/107 (33%), Positives = 56/107 (52%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+K H S ++ + VLL+GPPG GKT + KA A++ R FI + +
Sbjct: 119 IKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCR---------FINLQPST 169
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARES 107
L K++ ES KL +F+ A++ + S++ IDEI+S R R S
Sbjct: 170 LTDKWYGESQKLAAAVFSL---AIKLQPSII--FIDEIDSFLRNRSS 211
>POMBASE|SPAC2G11.06 [details] [associations]
symbol:vps4 "AAA family ATPase Vps4 (predicted)"
species:4896 "Schizosaccharomyces pombe" [GO:0005524 "ATP binding"
evidence=ISM] [GO:0005634 "nucleus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISS;IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISM] [GO:0043328 "protein targeting to vacuole
involved in ubiquitin-dependent protein catabolic process via the
multivesicular body sorting pathway" evidence=IMP] [GO:0045053
"protein retention in Golgi apparatus" evidence=ISS] [GO:0045324
"late endosome to vacuole transport" evidence=IMP]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
PomBase:SPAC2G11.06 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0016887 GO:GO:0010008
Pfam:PF04212 eggNOG:COG0464 InterPro:IPR015415 Pfam:PF09336
GO:GO:0043328 SMART:SM00745 GO:GO:0045053 HOGENOM:HOG000225146
KO:K12196 OMA:AKCAEYL EMBL:L33456 PIR:T38572 RefSeq:NP_593086.1
ProteinModelPortal:Q09803 SMR:Q09803 STRING:Q09803
EnsemblFungi:SPAC2G11.06.1 GeneID:2542054 KEGG:spo:SPAC2G11.06
OrthoDB:EOG4V1B8K NextBio:20803129 Uniprot:Q09803
Length = 432
Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 35/91 (38%), Positives = 53/91 (58%)
Query: 15 WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQ 74
W+ + LL+GPPGTGK+ L KAVA + + F I+S L SK+ ES +LV+
Sbjct: 162 WSGI-LLYGPPGTGKSYLAKAVATEAG---------STFFSISSSDLVSKWMGESERLVR 211
Query: 75 KMFNKIKEAVEYEESLVCLLIDEIESLTRAR 105
++F +E + S++ IDEI+SL +R
Sbjct: 212 QLFEMAREQ---KPSII--FIDEIDSLCGSR 237
>SGD|S000005785 [details] [associations]
symbol:RPT4 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0016887
"ATPase activity" evidence=ISS] [GO:0045899 "positive regulation of
RNA polymerase II transcriptional preinitiation complex assembly"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0070682 "proteasome regulatory particle
assembly" evidence=IMP] [GO:0030433 "ER-associated protein
catabolic process" evidence=IMP] [GO:0032968 "positive regulation
of transcription elongation from RNA polymerase II promoter"
evidence=IMP] [GO:0006289 "nucleotide-excision repair"
evidence=IGI] [GO:0019904 "protein domain specific binding"
evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 SGD:S000005785 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0019904 EMBL:BK006948 GO:GO:0016887
GO:GO:0030433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
RefSeq:NP_014902.3 GeneID:854433 KEGG:sce:YOR259C KO:K03064
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 GeneTree:ENSGT00550000074826 OMA:EHKEVES
GO:GO:0008540 OrthoDB:EOG40KC79 EMBL:U43720 EMBL:U93262 EMBL:Z75167
PIR:S67156 RefSeq:NP_014904.3 PDB:4B4T PDBsum:4B4T
ProteinModelPortal:P53549 SMR:P53549 DIP:DIP-1589N IntAct:P53549
MINT:MINT-397407 STRING:P53549 PaxDb:P53549 PeptideAtlas:P53549
EnsemblFungi:YOR259C GeneID:854435 KEGG:sce:YOR261C KO:K03038
NextBio:976664 Genevestigator:P53549 GermOnline:YOR259C
Uniprot:P53549
Length = 437
Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 38/112 (33%), Positives = 59/112 (52%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L KAVA + FI + + KY ES +++++MF
Sbjct: 218 VLLYGPPGTGKTLLAKAVAATIG---------ANFIFSPASGIVDKYIGESARIIREMFA 268
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV-RVVNAVLTQID 129
KE +E ++ +DE++++ R S GT + R + +LTQ+D
Sbjct: 269 YAKE---HEPCII--FMDEVDAIGGRRFS--EGTSADREIQRTLMELLTQMD 313
>SGD|S000006377 [details] [associations]
symbol:VPS4 "AAA-ATPase involved in multivesicular body (MVB)
protein sorting" species:4932 "Saccharomyces cerevisiae"
[GO:0042803 "protein homodimerization activity" evidence=IDA]
[GO:0045053 "protein retention in Golgi apparatus" evidence=IMP]
[GO:0005524 "ATP binding" evidence=IEA;IMP;IDA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA;IDA] [GO:0070676 "intralumenal vesicle formation"
evidence=IMP] [GO:0045324 "late endosome to vacuole transport"
evidence=IMP;IPI] [GO:0016887 "ATPase activity" evidence=IMP;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005768
"endosome" evidence=IEA;IDA] [GO:0006810 "transport" evidence=IEA]
[GO:0010008 "endosome membrane" evidence=IEA] [GO:0032511 "late
endosome to vacuole transport via multivesicular body sorting
pathway" evidence=IMP] [GO:0016125 "sterol metabolic process"
evidence=IGI;IMP] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0051260 "protein
homooligomerization" evidence=IDA] InterPro:IPR007330
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000006377
GO:GO:0005783 GO:GO:0005524 GO:GO:0042803 GO:GO:0016020
GO:GO:0015031 GO:GO:0005768 GO:GO:0051260 GO:GO:0016887
GO:GO:0010008 EMBL:BK006949 Pfam:PF04212 eggNOG:COG0464
InterPro:IPR015415 Pfam:PF09336 GO:GO:0016125 EMBL:U25842
SMART:SM00745 GO:GO:0032511 GO:GO:0045053 PDB:2V6X PDBsum:2V6X
GO:GO:0070676 GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146
KO:K12196 OMA:AKCAEYL OrthoDB:EOG4V1B8K EMBL:X92680 PIR:S59831
RefSeq:NP_015499.1 PDB:2QP9 PDB:2QPA PDB:2RKO PDB:3EIE PDB:3EIH
PDB:3MHV PDBsum:2QP9 PDBsum:2QPA PDBsum:2RKO PDBsum:3EIE
PDBsum:3EIH PDBsum:3MHV ProteinModelPortal:P52917 SMR:P52917
DIP:DIP-1746N IntAct:P52917 MINT:MINT-389240 STRING:P52917
PaxDb:P52917 PeptideAtlas:P52917 EnsemblFungi:YPR173C GeneID:856303
KEGG:sce:YPR173C CYGD:YPR173c EvolutionaryTrace:P52917
NextBio:981664 Genevestigator:P52917 GermOnline:YPR173C
Uniprot:P52917
Length = 437
Score = 126 (49.4 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 33/87 (37%), Positives = 52/87 (59%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LL+GPPGTGK+ L KAVA + + + F ++S L SK+ ES KLV+++F
Sbjct: 169 ILLYGPPGTGKSYLAKAVATEAN---------STFFSVSSSDLVSKWMGESEKLVKQLFA 219
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRAR 105
+E + S++ IDE+++LT R
Sbjct: 220 MAREN---KPSII--FIDEVDALTGTR 241
>UNIPROTKB|J3QQM1 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
GO:GO:0005524 GO:GO:0017111 EMBL:AC015651 ChiTaRS:PSMC5
HGNC:HGNC:9552 Ensembl:ENST00000582130 Uniprot:J3QQM1
Length = 263
Score = 122 (48.0 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L +AVA FI ++ L K+ E ++V+++F
Sbjct: 167 VLLYGPPGTGKTLLARAVAHHTDCT---------FIRVSGSELVQKFIGEGARMVRELFV 217
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
+E + S++ +DEI+S+ +R SG + S+ R + +L Q+D
Sbjct: 218 MARE---HAPSII--FMDEIDSIGSSRLEGGSGGD-SEVQRTMLELLNQLD 262
>FB|FBgn0028868 [details] [associations]
symbol:CG4701 species:7227 "Drosophila melanogaster"
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005741 "mitochondrial
outer membrane" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005741 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 EMBL:AY113316 ProteinModelPortal:Q8MZ76 SMR:Q8MZ76
STRING:Q8MZ76 PaxDb:Q8MZ76 PRIDE:Q8MZ76 FlyBase:FBgn0028868
InParanoid:Q8MZ76 OrthoDB:EOG49W0X0 ChiTaRS:CG4701
ArrayExpress:Q8MZ76 Bgee:Q8MZ76 Uniprot:Q8MZ76
Length = 384
Score = 125 (49.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 39/106 (36%), Positives = 53/106 (50%)
Query: 5 HSKVKSNIISWN--RVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLF 62
H K+ S W + VLLHGPPG GKT + KA+A+ +R FI ++ L
Sbjct: 117 HRKLFSRSKLWRAPKGVLLHGPPGCGKTLIAKAIAKDAGMR---------FINLDVGVLT 167
Query: 63 SKYFSESGKLVQKMFNKIKEAVEYEESLVCLL-IDEIESLTRARES 107
K++ ES KL +F K+ C++ IDEIES R R S
Sbjct: 168 DKWYGESQKLATAVFTLAKKLQP------CIIFIDEIESFLRMRGS 207
>DICTYBASE|DDB_G0287165 [details] [associations]
symbol:DDB_G0287165 "spastin-like protein"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016021
"integral to membrane" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0287165 GO:GO:0016021 GO:GO:0005524 GO:GO:0005737
Pfam:PF04212 eggNOG:COG0464 HSSP:O75351 GO:GO:0008568 GO:GO:0005874
EMBL:AAFI02000098 KO:K13254 HAMAP:MF_03021 RefSeq:XP_637373.1
ProteinModelPortal:Q54KQ7 SMR:Q54KQ7 EnsemblProtists:DDB0231319
GeneID:8625995 KEGG:ddi:DDB_G0287165 InParanoid:Q54KQ7 OMA:TERSSNE
ProtClustDB:CLSZ2729356 Uniprot:Q54KQ7
Length = 655
Score = 128 (50.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 37/89 (41%), Positives = 50/89 (56%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LL GPPG GKT + KAVA + K+T F I+S SL SKY + KLV+ +F
Sbjct: 420 LLLFGPPGNGKTMIAKAVAYES--------KVT-FFSISSSSLTSKYVGDGEKLVRALF- 469
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARES 107
A ++ S++ IDEI+SL R S
Sbjct: 470 --AVATHFQPSII--FIDEIDSLLTERSS 494
>DICTYBASE|DDB_G0282215 [details] [associations]
symbol:DDB_G0282215 "AAA ATPase domain-containing
protein" species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 SMART:SM00382
dictyBase:DDB_G0282215 GO:GO:0005524 GO:GO:0017111
EMBL:AAFI02000046 RefSeq:XP_640290.2 ProteinModelPortal:Q54SU5
EnsemblProtists:DDB0267128 GeneID:8623467 KEGG:ddi:DDB_G0282215
OMA:PNINFIS Uniprot:Q54SU5
Length = 534
Score = 117 (46.2 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 36/111 (32%), Positives = 58/111 (52%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPG GK+ + +A+A S I FI I+S + S K + K+F
Sbjct: 310 VLLYGPPGNGKSLIARAIAS-------SSPNIN-FISISSTDIIDPVVGASEKNLSKLFK 361
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
++E+ S L +D++E L + R S + SD R+++ +LT+ID
Sbjct: 362 TLRES-----SPCILFLDQVEVLAKLRGFDDSSEQSSD--RLLSCLLTEID 405
Score = 50 (22.7 bits), Expect = 2.4e-05, Sum P(2) = 2.4e-05
Identities = 15/47 (31%), Positives = 24/47 (51%)
Query: 130 QLKKKSTGLSGRTLRKI----PFLTFVKYISNNSVSMENFLIALEKT 172
QL + + G +G + + L I+ N++SM NFL AL+ T
Sbjct: 482 QLSELTQGFNGADINNLCKETALLALRNDININNISMSNFLDALKFT 528
>FB|FBgn0037375 [details] [associations]
symbol:kat-60L1 "katanin p60-like 1" species:7227 "Drosophila
melanogaster" [GO:0005783 "endoplasmic reticulum" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0051013
"microtubule severing" evidence=ISS] [GO:0008352 "katanin complex"
evidence=ISS] [GO:0005875 "microtubule associated complex"
evidence=ISS] [GO:0007017 "microtubule-based process" evidence=ISS]
[GO:0008017 "microtubule binding" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016322 "neuron remodeling"
evidence=IMP] [GO:0005874 "microtubule" evidence=IDA] [GO:0050775
"positive regulation of dendrite morphogenesis" evidence=IMP]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 EMBL:AE014297
GO:GO:0005524 GO:GO:0006200 GO:GO:0016322 GO:GO:0016887
GO:GO:0050775 eggNOG:COG0464 GO:GO:0008017 GO:GO:0051013
InterPro:IPR015415 Pfam:PF09336 GO:GO:0005874
GeneTree:ENSGT00550000074466 GO:GO:0008352 UniGene:Dm.8004
GeneID:40715 KEGG:dme:Dmel_CG1193 CTD:40715 FlyBase:FBgn0037375
ChiTaRS:kat-60L1 GenomeRNAi:40715 NextBio:820217 EMBL:BT023721
RefSeq:NP_001163523.1 RefSeq:NP_001163525.1 SMR:Q4QPP5
STRING:Q4QPP5 EnsemblMetazoa:FBtr0300738 EnsemblMetazoa:FBtr0300740
HOGENOM:HOG000034934 OMA:IQMDGLN Uniprot:Q4QPP5
Length = 673
Score = 128 (50.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 39/93 (41%), Positives = 51/93 (54%)
Query: 15 WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQ 74
W R VL+ GPPGTGKT L KAVA + T F ++S +L SKY ES KLV+
Sbjct: 427 W-RGVLMVGPPGTGKTMLAKAVATECG---------TTFFNVSSSTLTSKYRGESEKLVR 476
Query: 75 KMFNKIKEAVEYEESLVCLLIDEIESLTRARES 107
+F + Y S + IDEI++L +R S
Sbjct: 477 LLFEMARF---YAPSTI--FIDEIDALCASRGS 504
>UNIPROTKB|Q5ZMI9 [details] [associations]
symbol:VPS4B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0005769 "early endosome" evidence=IEA] [GO:0005770 "late
endosome" evidence=IEA] [GO:0005774 "vacuolar membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0006813
"potassium ion transport" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0010008 "endosome membrane"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0032367 "intracellular cholesterol transport" evidence=IEA]
[GO:0032510 "endosome to lysosome transport via multivesicular body
sorting pathway" evidence=IEA] [GO:0033993 "response to lipid"
evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0005774 GO:GO:0005764 GO:GO:0016887 GO:GO:0032367
GO:GO:0010008 GO:GO:0005770 GO:GO:0006813 GO:GO:0033993
Pfam:PF04212 GO:GO:0007032 InterPro:IPR015415 Pfam:PF09336
GO:GO:0005769 HOVERGEN:HBG057074 SMART:SM00745
GeneTree:ENSGT00550000074466 HOGENOM:HOG000225146 GO:GO:0032510
KO:K12196 CTD:9525 OMA:AKCAEYL EMBL:AC159826 EMBL:AJ719395
IPI:IPI00582043 RefSeq:NP_001006378.2 UniGene:Gga.8210 SMR:Q5ZMI9
STRING:Q5ZMI9 Ensembl:ENSGALT00000021007 GeneID:420901
KEGG:gga:420901 InParanoid:Q5ZMI9 NextBio:20823751 Uniprot:Q5ZMI9
Length = 438
Score = 126 (49.4 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 39/105 (37%), Positives = 56/105 (53%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+KF H W R +LL GPPGTGK+ L KAVA + + + F ++S
Sbjct: 149 IKFPHLFTGKRT-PW-RGILLFGPPGTGKSYLAKAVATEANN--------STFFSVSSSD 198
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRAR 105
L SK+ ES KLV+ +F +E + S++ IDEI+SL +R
Sbjct: 199 LVSKWLGESEKLVKNLFQLAREN---KPSII--FIDEIDSLCGSR 238
Score = 37 (18.1 bits), Expect = 2.5e-05, Sum P(2) = 2.5e-05
Identities = 16/60 (26%), Positives = 28/60 (46%)
Query: 124 VLTQID--QLKKKSTGLSG------------RTLRKIPFLTFVKYISNNSVSMENFLIAL 169
+LT+ D +L K++ G SG + +RK+ T K + SV+ N ++ L
Sbjct: 315 LLTEADYRELGKRTDGYSGADISIIVRDALMQPVRKVQSATHFKKVKGPSVTNPNIMVDL 374
>UNIPROTKB|F1PX89 [details] [associations]
symbol:ATAD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0017111 GeneTree:ENSGT00550000074823 OMA:YQVGIAD
EMBL:AAEX03014938 Ensembl:ENSCAFT00000035123 Uniprot:F1PX89
Length = 418
Score = 125 (49.1 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 36/107 (33%), Positives = 56/107 (52%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
+K H S ++ + VLL+GPPG GKT + KA A++ R FI + +
Sbjct: 168 IKKKHLFENSRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCR---------FINLQPST 218
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARES 107
L K++ ES KL +F+ A++ + S++ IDEI+S R R S
Sbjct: 219 LTDKWYGESQKLAAAVFSL---AIKLQPSII--FIDEIDSFLRNRSS 260
>SGD|S000003260 [details] [associations]
symbol:MSP1 "Mitochondrial protein involved in mitochondrial
protein sorting" species:4932 "Saccharomyces cerevisiae"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005741
"mitochondrial outer membrane" evidence=IEA;IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA;IDA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
membrane" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] [GO:0006626 "protein targeting to
mitochondrion" evidence=IGI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
SGD:S000003260 GO:GO:0016021 GO:GO:0005524 GO:GO:0006626
EMBL:BK006941 GO:GO:0005741 GO:GO:0016887 eggNOG:COG0464
HOGENOM:HOG000225141 GeneTree:ENSGT00550000074823 KO:K00706
EMBL:X60722 EMBL:X68055 EMBL:Z72813 RefSeq:NP_011546.3
GeneID:852920 KEGG:sce:YGR032W EMBL:X81069 EMBL:AY557772 PIR:A49506
RefSeq:NP_011542.3 ProteinModelPortal:P28737 SMR:P28737
DIP:DIP-8029N IntAct:P28737 MINT:MINT-4486830 STRING:P28737
PaxDb:P28737 PeptideAtlas:P28737 EnsemblFungi:YGR028W GeneID:852915
KEGG:sce:YGR028W CYGD:YGR028w OMA:VINPLHI OrthoDB:EOG4BVW3J
NextBio:972614 Genevestigator:P28737 GermOnline:YGR028W
Uniprot:P28737
Length = 362
Score = 124 (48.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 35/92 (38%), Positives = 48/92 (52%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMF- 77
VLL+GPPG GKT L KA+A++ FI I S+ K++ ES K+V MF
Sbjct: 129 VLLYGPPGCGKTMLAKALAKESG---------ANFISIRMSSIMDKWYGESNKIVDAMFS 179
Query: 78 --NKIKEAVEYEESLVCLLIDEIESLTRARES 107
NK++ + + IDEI+S R R S
Sbjct: 180 LANKLQPCI--------IFIDEIDSFLRERSS 203
>UNIPROTKB|F1NT80 [details] [associations]
symbol:ATAD1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0002092
"positive regulation of receptor internalization" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005778 "peroxisomal
membrane" evidence=IEA] [GO:0007612 "learning" evidence=IEA]
[GO:0007613 "memory" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IEA] [GO:0045211 "postsynaptic membrane" evidence=IEA]
[GO:0051967 "negative regulation of synaptic transmission,
glutamatergic" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005739 GO:GO:0005524 GO:GO:0051967 GO:GO:0045211
GO:GO:0016887 GO:GO:0005778 GO:GO:0002092 OMA:KNENXDR
GeneTree:ENSGT00550000074823 EMBL:AADN02035172 IPI:IPI00593427
Ensembl:ENSGALT00000005787 Uniprot:F1NT80
Length = 363
Score = 124 (48.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 34/98 (34%), Positives = 54/98 (55%)
Query: 10 SNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSES 69
S ++ + VLL+GPPG GKT + KA A++ R FI + +L K++ ES
Sbjct: 121 SRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGCR---------FINLQPSTLTDKWYGES 171
Query: 70 GKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARES 107
KL +F+ A++ + S++ IDEI+S R+R S
Sbjct: 172 QKLAAAVFSL---AIKLQPSII--FIDEIDSFLRSRSS 204
>ZFIN|ZDB-GENE-060929-204 [details] [associations]
symbol:spata5l1 "spermatogenesis associated 5-like
1" species:7955 "Danio rerio" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-060929-204 GO:GO:0005524
GeneTree:ENSGT00700000104502 GO:GO:0017111 CTD:79029 EMBL:CU929075
EMBL:CU595864 IPI:IPI00804177 RefSeq:NP_001070056.2
UniGene:Dr.80583 Ensembl:ENSDART00000101660
Ensembl:ENSDART00000129459 GeneID:767648 KEGG:dre:767648
NextBio:20918042 Uniprot:F1Q8W3
Length = 748
Score = 128 (50.1 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 45/149 (30%), Positives = 75/149 (50%)
Query: 1 MKFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
M+F + V+ + S R VLL+GPPG KT+L KA A S + F ++
Sbjct: 472 MRFPEAFVRLGV-SRPRGVLLYGPPGCAKTTLVKAAAS-------SSH--CSFFSLSGAE 521
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRV 120
LFS Y +S K + ++F + + S+V L DE++S+ +RE S + +V
Sbjct: 522 LFSPYVGDSEKTLAQLFAQARACAP---SIVFL--DEVDSMVGSREDGSSSSHSVQS-QV 575
Query: 121 VNAVLTQIDQLKKKSTGLSGRTLRKIPFL 149
++ +LT++D + ++ T RKI L
Sbjct: 576 LSVLLTELDGVGVRTLERRS-TCRKIALL 603
>UNIPROTKB|O61577 [details] [associations]
symbol:KATNA1 "Katanin p60 ATPase-containing subunit A1"
species:7668 "Strongylocentrotus purpuratus" [GO:0000922 "spindle
pole" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005819 "spindle" evidence=ISS] [GO:0030496 "midbody"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:AF052191 GO:GO:0005524 GO:GO:0005737 GO:GO:0051301
GO:GO:0007067 GO:GO:0005815 eggNOG:COG0464 GO:GO:0008568
GO:GO:0000922 GO:GO:0005874 KO:K07767 HAMAP:MF_03023 CTD:11104
RefSeq:NP_999733.1 UniGene:Spu.26881 ProteinModelPortal:O61577
STRING:O61577 GeneID:373368 KEGG:spu:373368 InParanoid:O61577
Uniprot:O61577
Length = 516
Score = 126 (49.4 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 37/91 (40%), Positives = 49/91 (53%)
Query: 15 WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQ 74
W V+++ GPPGTGKT L KAVA + T F ++S SL SKY ES KLV+
Sbjct: 267 WKGVLMV-GPPGTGKTMLAKAVATECG---------TTFFNVSSASLTSKYHGESEKLVR 316
Query: 75 KMFNKIKEAVEYEESLVCLLIDEIESLTRAR 105
+F + Y S + IDEI+S+ R
Sbjct: 317 LLFEMARF---YAPSTI--FIDEIDSICSKR 342
>UNIPROTKB|B4DFA2 [details] [associations]
symbol:NSF "cDNA FLJ59316, highly similar to Vesicle-fusing
ATPase (EC 3.6.4.6)" species:9606 "Homo sapiens" [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006813 "potassium ion transport"
evidence=IEA] [GO:0019905 "syntaxin binding" evidence=IEA]
[GO:0042623 "ATPase activity, coupled" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016192 GO:GO:0015031
GO:GO:0043198 GO:GO:0005795 GO:GO:0006813 GO:GO:0042623
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 GO:GO:0017157
EMBL:AC138645 HOVERGEN:HBG000324 EMBL:AC217780 UniGene:Hs.431279
HGNC:HGNC:8016 ChiTaRS:NSF EMBL:AK294001 IPI:IPI00985110 SMR:B4DFA2
STRING:B4DFA2 Ensembl:ENST00000225282 Uniprot:B4DFA2
Length = 644
Score = 127 (49.8 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 35/118 (29%), Positives = 64/118 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LL+GPPG GKT L + + + L+ R + K+ +N + +KY ES ++K+F
Sbjct: 162 ILLYGPPGCGKTLLARQIGKMLNAR---EPKV-----VNGPEILNKYVGESEANIRKLFA 213
Query: 79 KIKEA---VEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKK 133
+E + L ++ DEI+++ + R S+ T D VVN +L++ID +++
Sbjct: 214 DAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHD--TVVNQLLSKIDGVEQ 269
>GENEDB_PFALCIPARUM|PF07_0047 [details] [associations]
symbol:PF07_0047 "cell division cycle ATPase,
putative" species:5833 "Plasmodium falciparum" [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0051726 "regulation of cell cycle"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0016887 GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 PANTHER:PTHR23077:SF18
SMART:SM01073 EMBL:AL844506 EMBL:M96757 RefSeq:XP_001349023.1
ProteinModelPortal:P46468 IntAct:P46468 MINT:MINT-1593477
PRIDE:P46468 EnsemblProtists:PF07_0047:mRNA GeneID:2655095
KEGG:pfa:PF07_0047 EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 130 (50.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 39/117 (33%), Positives = 59/117 (50%)
Query: 2 KFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSL 61
K ++K SN +N+ +LL+GPPG GKT L KA+A + FI + L
Sbjct: 957 KHLYNKFNSN---YNKGILLYGPPGCGKTLLAKAIANECK---------ANFISVKGPEL 1004
Query: 62 FSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV 118
+ +F ES V+ +F+K + A S + DEI+SL + R S + + SD V
Sbjct: 1005 LTMWFGESEANVRDLFDKARAA-----SPCIIFFDEIDSLAKERNS-NTNNDASDRV 1055
>UNIPROTKB|P46468 [details] [associations]
symbol:PF07_0047 "Putative cell division cycle ATPase"
species:36329 "Plasmodium falciparum 3D7" [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0051726 "regulation of cell cycle" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005938 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016887
GO:GO:0007049 GO:GO:0051726 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 PANTHER:PTHR23077:SF18 SMART:SM01073 EMBL:AL844506
EMBL:M96757 RefSeq:XP_001349023.1 ProteinModelPortal:P46468
IntAct:P46468 MINT:MINT-1593477 PRIDE:P46468
EnsemblProtists:PF07_0047:mRNA GeneID:2655095 KEGG:pfa:PF07_0047
EuPathDB:PlasmoDB:PF3D7_0711000 Uniprot:P46468
Length = 1229
Score = 130 (50.8 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 39/117 (33%), Positives = 59/117 (50%)
Query: 2 KFSHSKVKSNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSL 61
K ++K SN +N+ +LL+GPPG GKT L KA+A + FI + L
Sbjct: 957 KHLYNKFNSN---YNKGILLYGPPGCGKTLLAKAIANECK---------ANFISVKGPEL 1004
Query: 62 FSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV 118
+ +F ES V+ +F+K + A S + DEI+SL + R S + + SD V
Sbjct: 1005 LTMWFGESEANVRDLFDKARAA-----SPCIIFFDEIDSLAKERNS-NTNNDASDRV 1055
>TAIR|locus:2137777 [details] [associations]
symbol:AT4G27680 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
EMBL:CP002687 GenomeReviews:CT486007_GR EMBL:AL161571 GO:GO:0000502
HSSP:Q01853 eggNOG:COG0464 GO:GO:0017111 HOGENOM:HOG000225141
EMBL:AL035602 OMA:EMCRNAS ProtClustDB:CLSN2685508 EMBL:AY093063
EMBL:AY085265 EMBL:BT000126 EMBL:AK226334 IPI:IPI00547334
PIR:T05873 RefSeq:NP_194498.1 UniGene:At.32076
ProteinModelPortal:Q9T090 SMR:Q9T090 STRING:Q9T090 PaxDb:Q9T090
PRIDE:Q9T090 EnsemblPlants:AT4G27680.1 GeneID:828882
KEGG:ath:AT4G27680 TAIR:At4g27680 InParanoid:Q9T090
PhylomeDB:Q9T090 Genevestigator:Q9T090 Uniprot:Q9T090
Length = 398
Score = 124 (48.7 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 33/89 (37%), Positives = 48/89 (53%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L KA+A++ FI + +L SK+F ++ KLV +F+
Sbjct: 122 VLLYGPPGTGKTMLAKAIAKESG---------AVFINVRVSNLMSKWFGDAQKLVSAVFS 172
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARES 107
+ Y+ + IDE+ES R S
Sbjct: 173 -----LAYKLQPAIIFIDEVESFLGQRRS 196
>CGD|CAL0000099 [details] [associations]
symbol:YTA6 species:5476 "Candida albicans" [GO:0030447
"filamentous growth" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0000099 GO:GO:0005524 GO:GO:0030447 eggNOG:COG0464
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000032
RefSeq:XP_719320.1 ProteinModelPortal:Q5ACT4 GeneID:3638990
KEGG:cal:CaO19.7558 Uniprot:Q5ACT4
Length = 820
Score = 128 (50.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 39/89 (43%), Positives = 51/89 (57%)
Query: 17 RVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKM 76
R +LL GPPGTGKT L +AVA + + + F I+S SL SKY ES KLV+ +
Sbjct: 572 RGMLLFGPPGTGKTMLARAVATESN---------STFFSISSSSLTSKYLGESEKLVKAL 622
Query: 77 FNKIKEAVEYEESLVCLLIDEIESLTRAR 105
F K+ S+V +DEI+SL AR
Sbjct: 623 FLLAKKLAP---SIV--FMDEIDSLLGAR 646
>UNIPROTKB|Q5ACT4 [details] [associations]
symbol:YTA6 "Potential AAA family ATPase" species:237561
"Candida albicans SC5314" [GO:0030447 "filamentous growth"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0000099 GO:GO:0005524 GO:GO:0030447 eggNOG:COG0464
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 EMBL:AACQ01000032
RefSeq:XP_719320.1 ProteinModelPortal:Q5ACT4 GeneID:3638990
KEGG:cal:CaO19.7558 Uniprot:Q5ACT4
Length = 820
Score = 128 (50.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 39/89 (43%), Positives = 51/89 (57%)
Query: 17 RVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKM 76
R +LL GPPGTGKT L +AVA + + + F I+S SL SKY ES KLV+ +
Sbjct: 572 RGMLLFGPPGTGKTMLARAVATESN---------STFFSISSSSLTSKYLGESEKLVKAL 622
Query: 77 FNKIKEAVEYEESLVCLLIDEIESLTRAR 105
F K+ S+V +DEI+SL AR
Sbjct: 623 FLLAKKLAP---SIV--FMDEIDSLLGAR 646
>SGD|S000003016 [details] [associations]
symbol:RPT6 "ATPase of the 19S regulatory particle of the 26S
proteasome" species:4932 "Saccharomyces cerevisiae" [GO:0034515
"proteasome storage granule" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0030163 "protein catabolic process" evidence=IEA] [GO:0070682
"proteasome regulatory particle assembly" evidence=IMP] [GO:0032968
"positive regulation of transcription elongation from RNA
polymerase II promoter" evidence=IMP] [GO:0045899 "positive
regulation of RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IGI;IMP] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0019904 "protein domain specific binding"
evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IPI] [GO:0006289 "nucleotide-excision
repair" evidence=IGI] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IMP] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IMP]
[GO:0000502 "proteasome complex" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 SGD:S000003016
GO:GO:0005524 GO:GO:0005634 GO:GO:0019904 GO:GO:0051091
GO:GO:0043161 EMBL:BK006941 GO:GO:0016887 GO:GO:0006338
GO:GO:0043433 GO:GO:0045899 GO:GO:0006289 GO:GO:0032968
GO:GO:0070682 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0034515
HOGENOM:HOG000225143 GO:GO:0008540 PDB:4B4T PDBsum:4B4T KO:K03066
OMA:TEILRIH GeneTree:ENSGT00550000074947 OrthoDB:EOG44N21J
EMBL:X66400 EMBL:L01626 EMBL:Z72570 EMBL:AY693135 PIR:S64052
RefSeq:NP_011467.1 ProteinModelPortal:Q01939 SMR:Q01939
DIP:DIP-979N IntAct:Q01939 MINT:MINT-568023 STRING:Q01939
PaxDb:Q01939 PeptideAtlas:Q01939 EnsemblFungi:YGL048C GeneID:852834
KEGG:sce:YGL048C NextBio:972403 Genevestigator:Q01939
GermOnline:YGL048C Uniprot:Q01939
Length = 405
Score = 124 (48.7 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 35/111 (31%), Positives = 58/111 (52%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
V+L+GPPGTGKT L +AVA + FI ++ L KY E ++V+++F
Sbjct: 185 VILYGPPGTGKTLLARAVAHHTDCK---------FIRVSGAELVQKYIGEGSRMVRELFV 235
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
+E + S++ +DEI+S+ R G + S+ R + +L Q+D
Sbjct: 236 MARE---HAPSII--FMDEIDSIGSTRVEGSGGGD-SEVQRTMLELLNQLD 280
>CGD|CAL0005827 [details] [associations]
symbol:RPT4 species:5476 "Candida albicans" [GO:0005634
"nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0008540 "proteasome regulatory particle, base subcomplex"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0070682 "proteasome regulatory particle assembly"
evidence=IEA] [GO:0032968 "positive regulation of transcription
elongation from RNA polymerase II promoter" evidence=IEA]
[GO:0045899 "positive regulation of RNA polymerase II
transcriptional preinitiation complex assembly" evidence=IEA]
[GO:0030433 "ER-associated protein catabolic process" evidence=IEA]
[GO:0006289 "nucleotide-excision repair" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
CGD:CAL0005827 GO:GO:0005524 GO:GO:0005737 GO:GO:0030163
GO:GO:0017111 EMBL:AACQ01000055 EMBL:AACQ01000054 KO:K03064
eggNOG:COG1222 TIGRFAMs:TIGR01242 RefSeq:XP_717345.1
RefSeq:XP_717434.1 ProteinModelPortal:Q5A6S2 STRING:Q5A6S2
GeneID:3640859 GeneID:3640966 KEGG:cal:CaO19.482
KEGG:cal:CaO19.8112 Uniprot:Q5A6S2
Length = 428
Score = 124 (48.7 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 38/112 (33%), Positives = 59/112 (52%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L KAVA + FI + ++ KY ES +L+++MF
Sbjct: 209 VLLYGPPGTGKTLLAKAVAATIG---------ANFIFSPASAIVDKYIGESARLIREMFA 259
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV-RVVNAVLTQID 129
KE +E ++ +DE++++ R S GT + R + +L Q+D
Sbjct: 260 YAKE---HEPCII--FMDEVDAIGGRRFS--EGTSADREIQRTLMELLNQMD 304
>UNIPROTKB|I3L0N3 [details] [associations]
symbol:NSF "Vesicle-fusing ATPase" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006813
"potassium ion transport" evidence=IEA] [GO:0019905 "syntaxin
binding" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0016192
GO:GO:0015031 GO:GO:0043198 GO:GO:0005795 GO:GO:0006813
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GO:GO:0017157 EMBL:AC138645 EMBL:AC217780 HGNC:HGNC:8016
ChiTaRS:NSF ProteinModelPortal:I3L0N3 SMR:I3L0N3 PRIDE:I3L0N3
Ensembl:ENST00000575068 Bgee:I3L0N3 Uniprot:I3L0N3
Length = 739
Score = 127 (49.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 35/118 (29%), Positives = 64/118 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LL+GPPG GKT L + + + L+ R + K+ +N + +KY ES ++K+F
Sbjct: 251 ILLYGPPGCGKTLLARQIGKMLNAR---EPKV-----VNGPEILNKYVGESEANIRKLFA 302
Query: 79 KIKEA---VEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKK 133
+E + L ++ DEI+++ + R S+ T D VVN +L++ID +++
Sbjct: 303 DAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHD--TVVNQLLSKIDGVEQ 358
>TAIR|locus:2135378 [details] [associations]
symbol:NSF "N-ethylmaleimide sensitive factor"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=ISM;IDA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005773
"vacuole" evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0009506 GO:GO:0005524
GO:GO:0005794 GO:GO:0005773 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016192 GO:GO:0046872 EMBL:AL161502 GO:GO:0015031
eggNOG:COG0464 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933 SMART:SM01073
EMBL:AF128393 KO:K06027 EMBL:AY102111 IPI:IPI00527613 PIR:G85061
RefSeq:NP_192400.2 UniGene:At.33942 UniGene:At.67369
ProteinModelPortal:Q9M0Y8 SMR:Q9M0Y8 IntAct:Q9M0Y8 STRING:Q9M0Y8
PaxDb:Q9M0Y8 PRIDE:Q9M0Y8 EnsemblPlants:AT4G04910.1 GeneID:825830
KEGG:ath:AT4G04910 GeneFarm:2444 TAIR:At4g04910
HOGENOM:HOG000198544 InParanoid:Q9M0Y8 OMA:MTSGQRV PhylomeDB:Q9M0Y8
ProtClustDB:CLSN2690750 Genevestigator:Q9M0Y8 GermOnline:AT4G04910
Uniprot:Q9M0Y8
Length = 742
Score = 127 (49.8 bits), Expect = 3.6e-05, P = 3.6e-05
Identities = 40/131 (30%), Positives = 69/131 (52%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LL GPPGTGKT + + + + L+ + KI +N + SK+ E+ K V+ +F
Sbjct: 253 MLLFGPPGTGKTLMARQIGKMLNGK---DPKI-----VNGPEVLSKFVGETEKNVRDLFA 304
Query: 79 KIKE---AVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKK-K 134
++ + L ++ DEI+++ ++R S GT D + VN +LT+ID ++
Sbjct: 305 DAEQDQRTLGDASELHVIIFDEIDAICKSRGSTRDGTGVHDSI--VNQLLTKIDGVEALN 362
Query: 135 STGLSGRTLRK 145
+ L G T RK
Sbjct: 363 NVLLIGMTNRK 373
>UNIPROTKB|P46459 [details] [associations]
symbol:NSF "Vesicle-fusing ATPase" species:9606 "Homo
sapiens" [GO:0005524 "ATP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IEA]
[GO:0019905 "syntaxin binding" evidence=IEA] [GO:0042623 "ATPase
activity, coupled" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0032403 "protein complex binding" evidence=IDA]
[GO:0006887 "exocytosis" evidence=TAS] [GO:0045026 "plasma membrane
fusion" evidence=TAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0030165 "PDZ domain binding" evidence=IPI] [GO:0001921
"positive regulation of receptor recycling" evidence=IDA]
[GO:0005829 "cytosol" evidence=TAS] [GO:0007268 "synaptic
transmission" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_13685 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005829 GO:GO:0005886
GO:GO:0005524 GO:GO:0032403 GO:GO:0046872 GO:GO:0015031
GO:GO:0007268 GO:GO:0043198 GO:GO:0005795 GO:GO:0006813
GO:GO:0006887 eggNOG:COG0464 GO:GO:0001921 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623 InterPro:IPR004201
Pfam:PF02933 SMART:SM01072 SMART:SM01073 GO:GO:0017157
GO:GO:0045026 EMBL:AC138645 KO:K06027 OMA:IFTLRTH
HOGENOM:HOG000198544 HOVERGEN:HBG000324 EMBL:U03985 EMBL:AF135168
EMBL:AF102846 EMBL:AK290204 EMBL:AC004098 EMBL:AC138688
EMBL:AC217769 EMBL:AC217778 EMBL:AC217780 EMBL:BC030613
IPI:IPI00006451 PIR:G01234 RefSeq:NP_006169.2 UniGene:Hs.431279
ProteinModelPortal:P46459 SMR:P46459 DIP:DIP-389N IntAct:P46459
MINT:MINT-1369243 STRING:P46459 TCDB:1.F.1.1.1 PhosphoSite:P46459
DMDM:257051048 UCD-2DPAGE:P46459 PaxDb:P46459 PRIDE:P46459
Ensembl:ENST00000398238 GeneID:4905 KEGG:hsa:4905 UCSC:uc002iku.3
CTD:4905 GeneCards:GC17P044668 H-InvDB:HIX0013914
H-InvDB:HIX0013915 HGNC:HGNC:8016 HPA:CAB009324 HPA:CAB013645
HPA:HPA003154 MIM:601633 neXtProt:NX_P46459 PharmGKB:PA31793
InParanoid:P46459 OrthoDB:EOG4DZ1TR PhylomeDB:P46459 ChiTaRS:NSF
GenomeRNAi:4905 NextBio:18875 PMAP-CutDB:P46459 ArrayExpress:P46459
Bgee:P46459 CleanEx:HS_NSF Genevestigator:P46459
GermOnline:ENSG00000073969 Uniprot:P46459
Length = 744
Score = 127 (49.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 35/118 (29%), Positives = 64/118 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LL+GPPG GKT L + + + L+ R + K+ +N + +KY ES ++K+F
Sbjct: 256 ILLYGPPGCGKTLLARQIGKMLNAR---EPKV-----VNGPEILNKYVGESEANIRKLFA 307
Query: 79 KIKEA---VEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKK 133
+E + L ++ DEI+++ + R S+ T D VVN +L++ID +++
Sbjct: 308 DAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHD--TVVNQLLSKIDGVEQ 363
>UNIPROTKB|P18708 [details] [associations]
symbol:NSF "Vesicle-fusing ATPase" species:10029
"Cricetulus griseus" [GO:0030496 "midbody" evidence=IDA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
GO:GO:0015031 GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0030496 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 EMBL:X15652 PIR:S04235 PDB:1D2N
PDB:1NSF PDB:1QCS PDB:1QDN PDBsum:1D2N PDBsum:1NSF PDBsum:1QCS
PDBsum:1QDN ProteinModelPortal:P18708 SMR:P18708 DIP:DIP-35598N
IntAct:P18708 PRIDE:P18708 HOVERGEN:HBG000324
EvolutionaryTrace:P18708 Uniprot:P18708
Length = 744
Score = 127 (49.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 35/118 (29%), Positives = 64/118 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LL+GPPG GKT L + + + L+ R + K+ +N + +KY ES ++K+F
Sbjct: 256 ILLYGPPGCGKTLLARQIGKMLNAR---EPKV-----VNGPEILNKYVGESEANIRKLFA 307
Query: 79 KIKEA---VEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKK 133
+E + L ++ DEI+++ + R S+ T D VVN +L++ID +++
Sbjct: 308 DAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHD--TVVNQLLSKIDGVEQ 363
>MGI|MGI:104560 [details] [associations]
symbol:Nsf "N-ethylmaleimide sensitive fusion protein"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001921 "positive regulation of receptor
recycling" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005795 "Golgi stack" evidence=ISO]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO;IMP] [GO:0006810 "transport"
evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IDA]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0014069
"postsynaptic density" evidence=ISO] [GO:0015031 "protein
transport" evidence=ISO] [GO:0016192 "vesicle-mediated transport"
evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0017137 "Rab
GTPase binding" evidence=ISO] [GO:0017157 "regulation of
exocytosis" evidence=ISO] [GO:0019905 "syntaxin binding"
evidence=IDA] [GO:0030165 "PDZ domain binding" evidence=ISO]
[GO:0032403 "protein complex binding" evidence=ISO] [GO:0042623
"ATPase activity, coupled" evidence=IMP] [GO:0043008 "ATP-dependent
protein binding" evidence=ISO] [GO:0043198 "dendritic shaft"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
MGI:MGI:104560 Pfam:PF02359 GO:GO:0005886 GO:GO:0005524
GO:GO:0016192 GO:GO:0046872 GO:GO:0015031 GO:GO:0043198
GO:GO:0005795 GO:GO:0019905 GO:GO:0006813 eggNOG:COG0464
GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
GO:GO:0042623 InterPro:IPR004201 Pfam:PF02933 SMART:SM01072
SMART:SM01073 GO:GO:0017157 GeneTree:ENSGT00530000064085 KO:K06027
OMA:IFTLRTH HOVERGEN:HBG000324 CTD:4905 OrthoDB:EOG4DZ1TR
ChiTaRS:NSF EMBL:U10120 EMBL:AK028415 EMBL:AK032120 EMBL:AK049281
EMBL:AK051430 EMBL:AK085086 EMBL:AK153905 EMBL:AL596108
EMBL:AL603829 EMBL:BC006627 EMBL:BC019167 IPI:IPI00656325
RefSeq:NP_032766.2 UniGene:Mm.260117 UniGene:Mm.474887
ProteinModelPortal:P46460 SMR:P46460 IntAct:P46460 MINT:MINT-89339
STRING:P46460 PhosphoSite:P46460 REPRODUCTION-2DPAGE:P46460
PaxDb:P46460 PRIDE:P46460 Ensembl:ENSMUST00000103075 GeneID:18195
KEGG:mmu:18195 UCSC:uc007lvt.1 InParanoid:P46460 NextBio:293548
Bgee:P46460 CleanEx:MM_NSF Genevestigator:P46460
GermOnline:ENSMUSG00000034187 Uniprot:P46460
Length = 744
Score = 127 (49.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 35/118 (29%), Positives = 64/118 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LL+GPPG GKT L + + + L+ R + K+ +N + +KY ES ++K+F
Sbjct: 256 ILLYGPPGCGKTLLARQIGKMLNAR---EPKV-----VNGPEILNKYVGESEANIRKLFA 307
Query: 79 KIKEA---VEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKK 133
+E + L ++ DEI+++ + R S+ T D VVN +L++ID +++
Sbjct: 308 DAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHD--TVVNQLLSKIDGVEQ 363
>RGD|621594 [details] [associations]
symbol:Nsf "N-ethylmaleimide-sensitive factor" species:10116
"Rattus norvegicus" [GO:0001921 "positive regulation of receptor
recycling" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005795 "Golgi stack" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO;IDA;TAS] [GO:0006813 "potassium ion
transport" evidence=ISO] [GO:0006906 "vesicle fusion" evidence=TAS]
[GO:0006944 "cellular membrane fusion" evidence=TAS] [GO:0007269
"neurotransmitter secretion" evidence=TAS] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0014069 "postsynaptic
density" evidence=IDA;TAS] [GO:0015031 "protein transport"
evidence=IMP] [GO:0016192 "vesicle-mediated transport"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA;TAS]
[GO:0017137 "Rab GTPase binding" evidence=IDA] [GO:0017157
"regulation of exocytosis" evidence=IMP] [GO:0019905 "syntaxin
binding" evidence=ISO] [GO:0030165 "PDZ domain binding"
evidence=ISO] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0042623 "ATPase activity, coupled" evidence=ISO] [GO:0043008
"ATP-dependent protein binding" evidence=IPI] [GO:0043198
"dendritic shaft" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 RGD:621594 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0014069 GO:GO:0046872 GO:GO:0015031
GO:GO:0043198 GO:GO:0005795 GO:GO:0016887 GO:GO:0006813
eggNOG:COG0464 GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0017137 GO:GO:0007269 GO:GO:0042623
GO:GO:0006906 InterPro:IPR004201 Pfam:PF02933 SMART:SM01072
SMART:SM01073 GO:GO:0017157 KO:K06027 HOGENOM:HOG000198544
HOVERGEN:HBG000324 CTD:4905 OrthoDB:EOG4DZ1TR EMBL:AF142097
EMBL:AF189019 IPI:IPI00210635 RefSeq:NP_068516.1 UniGene:Rn.13345
HSSP:P18708 ProteinModelPortal:Q9QUL6 SMR:Q9QUL6 IntAct:Q9QUL6
STRING:Q9QUL6 PhosphoSite:Q9QUL6 World-2DPAGE:0004:Q9QUL6
PRIDE:Q9QUL6 GeneID:60355 KEGG:rno:60355 UCSC:RGD:621594
InParanoid:Q9QUL6 NextBio:612027 ArrayExpress:Q9QUL6
Genevestigator:Q9QUL6 GermOnline:ENSRNOG00000003905 Uniprot:Q9QUL6
Length = 744
Score = 127 (49.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 35/118 (29%), Positives = 64/118 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LL+GPPG GKT L + + + L+ R + K+ +N + +KY ES ++K+F
Sbjct: 256 ILLYGPPGCGKTLLARQIGKMLNAR---EPKV-----VNGPEILNKYVGESEANIRKLFA 307
Query: 79 KIKEA---VEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKK 133
+E + L ++ DEI+++ + R S+ T D VVN +L++ID +++
Sbjct: 308 DAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHD--TVVNQLLSKIDGVEQ 363
>UNIPROTKB|F1LQ81 [details] [associations]
symbol:Nsf "Vesicle-fusing ATPase" species:10116 "Rattus
norvegicus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
RGD:621594 Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0006813 GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
IPI:IPI00210635 PRIDE:F1LQ81 Ensembl:ENSRNOT00000006361
ArrayExpress:F1LQ81 Uniprot:F1LQ81
Length = 744
Score = 127 (49.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 35/118 (29%), Positives = 64/118 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LL+GPPG GKT L + + + L+ R + K+ +N + +KY ES ++K+F
Sbjct: 256 ILLYGPPGCGKTLLARQIGKMLNAR---EPKV-----VNGPEILNKYVGESEANIRKLFA 307
Query: 79 KIKEA---VEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKK 133
+E + L ++ DEI+++ + R S+ T D VVN +L++ID +++
Sbjct: 308 DAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHD--TVVNQLLSKIDGVEQ 363
>UNIPROTKB|F1P6Z3 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=IEA]
[GO:0030165 "PDZ domain binding" evidence=IEA] [GO:0019905
"syntaxin binding" evidence=IEA] [GO:0006813 "potassium ion
transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0001921
"positive regulation of receptor recycling" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005886
GO:GO:0005524 GO:GO:0005737 GO:GO:0006813 GO:GO:0001921
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692 GO:GO:0042623
InterPro:IPR004201 Pfam:PF02933 SMART:SM01072 SMART:SM01073
GeneTree:ENSGT00530000064085 EMBL:AAEX03006344
Ensembl:ENSCAFT00000021409 Uniprot:F1P6Z3
Length = 745
Score = 127 (49.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 35/118 (29%), Positives = 64/118 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LL+GPPG GKT L + + + L+ R + K+ +N + +KY ES ++K+F
Sbjct: 257 ILLYGPPGCGKTLLARQIGKMLNAR---EPKV-----VNGPEILNKYVGESEANIRKLFA 308
Query: 79 KIKEA---VEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKK 133
+E + L ++ DEI+++ + R S+ T D VVN +L++ID +++
Sbjct: 309 DAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHD--TVVNQLLSKIDGVEQ 364
>UNIPROTKB|F1MZU2 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042623 "ATPase activity, coupled" evidence=IEA]
[GO:0032403 "protein complex binding" evidence=IEA] [GO:0030165
"PDZ domain binding" evidence=IEA] [GO:0019905 "syntaxin binding"
evidence=IEA] [GO:0006813 "potassium ion transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0001921 "positive regulation of receptor
recycling" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005886 GO:GO:0005524 GO:GO:0005737
GO:GO:0006813 GO:GO:0001921 Gene3D:2.40.40.20 InterPro:IPR009010
SUPFAM:SSF50692 GO:GO:0042623 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
OMA:IFTLRTH EMBL:DAAA02049275 EMBL:DAAA02049276 IPI:IPI00721227
Ensembl:ENSBTAT00000011107 Uniprot:F1MZU2
Length = 746
Score = 127 (49.8 bits), Expect = 3.7e-05, P = 3.7e-05
Identities = 35/118 (29%), Positives = 64/118 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LL+GPPG GKT L + + + L+ R + K+ +N + +KY ES ++K+F
Sbjct: 256 ILLYGPPGCGKTLLARQIGKMLNAR---EPKV-----VNGPEILNKYVGESEANIRKLFA 307
Query: 79 KIKEA---VEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKK 133
+E + L ++ DEI+++ + R S+ T D VVN +L++ID +++
Sbjct: 308 DAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHD--TVVNQLLSKIDGVEQ 363
>UNIPROTKB|F1S7T6 [details] [associations]
symbol:KATNA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005813 GO:GO:0001764
GO:GO:0008104 GO:GO:0005811 GO:GO:0030424 GO:GO:0008568
GO:GO:0001578 GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336
GO:GO:0000922 GO:GO:0031122 GeneTree:ENSGT00550000074466
GO:GO:0051329 EMBL:CU915504 Ensembl:ENSSSCT00000004539 OMA:YHGESER
Uniprot:F1S7T6
Length = 263
Score = 120 (47.3 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 36/91 (39%), Positives = 49/91 (53%)
Query: 15 WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQ 74
W V+++ GPPGTGKT L KAVA + T F ++S +L SKY ES KLV+
Sbjct: 14 WKGVLMV-GPPGTGKTLLAKAVATECK---------TTFFNVSSSTLTSKYRGESEKLVR 63
Query: 75 KMFNKIKEAVEYEESLVCLLIDEIESLTRAR 105
+F E + S + IDEI+S+ R
Sbjct: 64 LLF----EMARFY-SPATIFIDEIDSICSRR 89
>ASPGD|ASPL0000049719 [details] [associations]
symbol:AN2213 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0070682 "proteasome
regulatory particle assembly" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0045732 "positive regulation of protein catabolic
process" evidence=IEA] [GO:0043171 "peptide catabolic process"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:BN001307
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03062 OMA:FIRNQER
OrthoDB:EOG4FN7S6 EMBL:AACD01000035 RefSeq:XP_659817.1
ProteinModelPortal:Q5BB67 STRING:Q5BB67
EnsemblFungi:CADANIAT00008897 GeneID:2875757 KEGG:ani:AN2213.2
Uniprot:Q5BB67
Length = 460
Score = 124 (48.7 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 39/111 (35%), Positives = 58/111 (52%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
V+L+G PGTGKT L KAVA + S F+ I L KY + +LV+++F
Sbjct: 241 VILYGAPGTGKTLLAKAVANQTS---------ATFLRIVGSELIQKYLGDGPRLVRQIF- 290
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
+ A E+ S+V IDEI+++ R SG E + R + +L Q+D
Sbjct: 291 --QVAAEHAPSIV--FIDEIDAIGTKRYDSTSGGE-REIQRTMLELLNQLD 336
>UNIPROTKB|E2RFV4 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
OMA:IFTLRTH EMBL:AAEX03006344 Ensembl:ENSCAFT00000021411
Uniprot:E2RFV4
Length = 811
Score = 127 (49.8 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 35/118 (29%), Positives = 64/118 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LL+GPPG GKT L + + + L+ R + K+ +N + +KY ES ++K+F
Sbjct: 315 ILLYGPPGCGKTLLARQIGKMLNAR---EPKV-----VNGPEILNKYVGESEANIRKLFA 366
Query: 79 KIKEA---VEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKK 133
+E + L ++ DEI+++ + R S+ T D VVN +L++ID +++
Sbjct: 367 DAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHD--TVVNQLLSKIDGVEQ 422
>DICTYBASE|DDB_G0284517 [details] [associations]
symbol:psmC6 "26S protease regulatory subunit S10B"
species:44689 "Dictyostelium discoideum" [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 dictyBase:DDB_G0284517
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GenomeReviews:CM000153_GR
GO:GO:0030163 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
EMBL:AAFI02000066 KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
RefSeq:XP_638541.1 ProteinModelPortal:Q54PJ1 STRING:Q54PJ1
EnsemblProtists:DDB0232968 GeneID:8624634 KEGG:ddi:DDB_G0284517
OMA:HAANITK ProtClustDB:CLSZ2429012 Uniprot:Q54PJ1
Length = 393
Score = 123 (48.4 bits), Expect = 4.1e-05, P = 4.1e-05
Identities = 35/112 (31%), Positives = 60/112 (53%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L +A+A L F+++ S ++ KY ES +++++MF
Sbjct: 174 VLLYGPPGTGKTLLARAIASNLE---------ANFLKVVSSAIVDKYIGESARVIREMFG 224
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV-RVVNAVLTQID 129
++ + V + +DEI+++ R S GT + R + +L Q+D
Sbjct: 225 YARD----HQPCV-IFMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQMD 269
>WB|WBGene00003818 [details] [associations]
symbol:nsf-1 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0009792 "embryo development ending
in birth or egg hatching" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0032940
"secretion by cell" evidence=IMP] [GO:0071688 "striated muscle
myosin thick filament assembly" evidence=IMP] [GO:0006915
"apoptotic process" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524
GO:GO:0009792 GO:GO:0006898 GO:GO:0005737 GO:GO:0040007
GO:GO:0006915 GO:GO:0002119 GO:GO:0032940 GO:GO:0046872
GO:GO:0015031 GO:GO:0071688 GO:GO:0000003 eggNOG:COG0464
GO:GO:0017111 Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 SMART:SM01073
GeneTree:ENSGT00530000064085 KO:K06027 OMA:HFIFALE
HOGENOM:HOG000198544 EMBL:Z96100 EMBL:Z79698 PIR:T23096
RefSeq:NP_001076603.1 ProteinModelPortal:Q94392 SMR:Q94392
DIP:DIP-24326N IntAct:Q94392 MINT:MINT-212260 STRING:Q94392
PaxDb:Q94392 PRIDE:Q94392 EnsemblMetazoa:H15N14.2a GeneID:266842
KEGG:cel:CELE_H15N14.2 UCSC:H15N14.2a CTD:266842 WormBase:H15N14.2a
InParanoid:Q94392 NextBio:953236 ArrayExpress:Q94392 Uniprot:Q94392
Length = 824
Score = 127 (49.8 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 40/133 (30%), Positives = 69/133 (51%)
Query: 17 RVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKM 76
R +LL GPPGTGKT + + + + L+ R + KI +N + KY ES V+K+
Sbjct: 331 RGILLFGPPGTGKTLMARQIGKMLNAR---EPKI-----VNGPQILDKYVGESESNVRKL 382
Query: 77 FNKIKEAVEY---EESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKK 133
F +E L ++ DEI+++ + R S+ + D VVN +L+++D +++
Sbjct: 383 FADAEEEWRRCGANSGLHIIIFDEIDAICKQRGSMAGSSSVHD--TVVNQLLSKMDGVEQ 440
Query: 134 KSTGLS-GRTLRK 145
+ L G T R+
Sbjct: 441 LNNILVIGMTNRR 453
>UNIPROTKB|Q94392 [details] [associations]
symbol:nsf-1 "Vesicle-fusing ATPase" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
InterPro:IPR003338 Pfam:PF02359 GO:GO:0005524 GO:GO:0009792
GO:GO:0006898 GO:GO:0005737 GO:GO:0040007 GO:GO:0006915
GO:GO:0002119 GO:GO:0032940 GO:GO:0046872 GO:GO:0015031
GO:GO:0071688 GO:GO:0000003 eggNOG:COG0464 GO:GO:0017111
Gene3D:2.40.40.20 InterPro:IPR009010 SUPFAM:SSF50692
InterPro:IPR004201 Pfam:PF02933 SMART:SM01073
GeneTree:ENSGT00530000064085 KO:K06027 OMA:HFIFALE
HOGENOM:HOG000198544 EMBL:Z96100 EMBL:Z79698 PIR:T23096
RefSeq:NP_001076603.1 ProteinModelPortal:Q94392 SMR:Q94392
DIP:DIP-24326N IntAct:Q94392 MINT:MINT-212260 STRING:Q94392
PaxDb:Q94392 PRIDE:Q94392 EnsemblMetazoa:H15N14.2a GeneID:266842
KEGG:cel:CELE_H15N14.2 UCSC:H15N14.2a CTD:266842 WormBase:H15N14.2a
InParanoid:Q94392 NextBio:953236 ArrayExpress:Q94392 Uniprot:Q94392
Length = 824
Score = 127 (49.8 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 40/133 (30%), Positives = 69/133 (51%)
Query: 17 RVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKM 76
R +LL GPPGTGKT + + + + L+ R + KI +N + KY ES V+K+
Sbjct: 331 RGILLFGPPGTGKTLMARQIGKMLNAR---EPKI-----VNGPQILDKYVGESESNVRKL 382
Query: 77 FNKIKEAVEY---EESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKK 133
F +E L ++ DEI+++ + R S+ + D VVN +L+++D +++
Sbjct: 383 FADAEEEWRRCGANSGLHIIIFDEIDAICKQRGSMAGSSSVHD--TVVNQLLSKMDGVEQ 440
Query: 134 KSTGLS-GRTLRK 145
+ L G T R+
Sbjct: 441 LNNILVIGMTNRR 453
>ZFIN|ZDB-GENE-040625-69 [details] [associations]
symbol:psmc1b "proteasome (prosome, macropain) 26S
subunit, ATPase, 1b" species:7955 "Danio rerio" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-040625-69 GO:GO:0005524 GO:GO:0005737
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 HOGENOM:HOG000225143
KO:K03062 GeneTree:ENSGT00550000074818 EMBL:AL935145 EMBL:BC071538
IPI:IPI00495318 RefSeq:NP_001002091.1 UniGene:Dr.1187 STRING:Q6IQ72
Ensembl:ENSDART00000063950 GeneID:415181 KEGG:dre:415181 CTD:415181
InParanoid:Q6IQ72 NextBio:20818851 Uniprot:Q6IQ72
Length = 440
Score = 125 (49.1 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 39/111 (35%), Positives = 59/111 (53%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
V+L+G PGTGKT L KAVA + S F+ + L KY + KLV+++F
Sbjct: 222 VILYGAPGTGKTLLAKAVANQTS---------ATFLRVVGSELIQKYLGDGPKLVRELF- 271
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
++ E E+ S+V IDEI+++ R SG E + R + +L Q+D
Sbjct: 272 RVAE--EHAPSIV--FIDEIDAIGTKRYDSNSGGE-REIQRTMLELLNQLD 317
Score = 36 (17.7 bits), Expect = 4.2e-05, Sum P(2) = 4.2e-05
Identities = 9/27 (33%), Positives = 11/27 (40%)
Query: 213 YPLQHSKHFTELVQSHPGRCKVTSDDS 239
+PL K + Q H R V D S
Sbjct: 353 FPLPDEKTKRRIFQIHTSRMTVAEDVS 379
>UNIPROTKB|Q60HE0 [details] [associations]
symbol:PEX6 "Peroxin Pex6p" species:9541 "Macaca
fascicularis" [GO:0005524 "ATP binding" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0005777 "peroxisome" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0006625 "protein targeting to
peroxisome" evidence=ISS] [GO:0007031 "peroxisome organization"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0042623 "ATPase activity, coupled" evidence=ISS] [GO:0050821
"protein stabilization" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005524 GO:GO:0050821
GO:GO:0005777 GO:GO:0032403 GO:GO:0008022 GO:GO:0042623
GO:GO:0016561 HOVERGEN:HBG002311 EMBL:AB125187
ProteinModelPortal:Q60HE0 Uniprot:Q60HE0
Length = 570
Score = 125 (49.1 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 38/114 (33%), Positives = 60/114 (52%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LLHGPPGTGKT L KAVA + S+ F+ + L + Y +S + V+++F
Sbjct: 330 LLLHGPPGTGKTLLAKAVATECSLT---------FLSVKGPELINMYVGQSEENVREVFA 380
Query: 79 KIKEAVEYEESLVCLLI-DEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQL 131
+ + A C++ DE++SL +R SG RVV+ +L ++D L
Sbjct: 381 RARAAAP------CIIFFDELDSLAPSRGR--SGDSGGVMDRVVSQLLAELDGL 426
>UNIPROTKB|F1S3Z2 [details] [associations]
symbol:SPAST "Spastin" species:9823 "Sus scrofa"
[GO:0051260 "protein homooligomerization" evidence=IEA] [GO:0051013
"microtubule severing" evidence=IEA] [GO:0048487 "beta-tubulin
binding" evidence=IEA] [GO:0043014 "alpha-tubulin binding"
evidence=IEA] [GO:0034214 "protein hexamerization" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0030496
"midbody" evidence=IEA] [GO:0008568 "microtubule-severing ATPase
activity" evidence=IEA] [GO:0008017 "microtubule binding"
evidence=IEA] [GO:0007109 "cytokinesis, completion of separation"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IEA] [GO:0005874 "microtubule" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001578
"microtubule bundle formation" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR017179
Pfam:PF00004 PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382
GO:GO:0005783 GO:GO:0005524 GO:GO:0005634 GO:GO:0015630
GO:GO:0005768 GO:GO:0051260 Pfam:PF04212 GO:GO:0006888
GO:GO:0030496 GO:GO:0007109 GO:GO:0008568 GO:GO:0001578
GO:GO:0051013 SMART:SM00745 GO:GO:0034214
GeneTree:ENSGT00570000078874 OMA:HKSTPKT EMBL:FP583344
EMBL:CU694619 Ensembl:ENSSSCT00000009321 Uniprot:F1S3Z2
Length = 479
Score = 124 (48.7 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 37/89 (41%), Positives = 49/89 (55%)
Query: 17 RVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKM 76
R +LL GPPG GKT L KAVA + + F I++ SL SKY E KLV+ +
Sbjct: 290 RGLLLFGPPGNGKTMLAKAVAAESN---------ATFFNISAASLTSKYVGEGEKLVRAL 340
Query: 77 FNKIKEAVEYEESLVCLLIDEIESLTRAR 105
F A E + S++ IDE++SL R R
Sbjct: 341 F---AVARELQPSII--FIDEVDSLLRER 364
>FB|FBgn0020369 [details] [associations]
symbol:Rpt6 "Regulatory particle triple-A ATPase 6"
species:7227 "Drosophila melanogaster" [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0004175
"endopeptidase activity" evidence=IDA;NAS] [GO:0008540 "proteasome
regulatory particle, base subcomplex" evidence=ISS;NAS] [GO:0005838
"proteasome regulatory particle" evidence=ISS;IDA;NAS] [GO:0000502
"proteasome complex" evidence=NAS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=NAS] [GO:0006508 "proteolysis"
evidence=ISS;IDA;NAS] [GO:0016887 "ATPase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005875
"microtubule associated complex" evidence=IDA] [GO:0006974
"response to DNA damage stimulus" evidence=IMP] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0005875 EMBL:AE014298
GO:GO:0006508 GO:GO:0006974 GO:GO:0016887 GO:GO:0004175
GO:GO:0030163 eggNOG:COG1222 TIGRFAMs:TIGR01242 GO:GO:0008540
BRENDA:3.4.25.1 KO:K03066 OMA:QNIKVIM GeneTree:ENSGT00550000074947
EMBL:U97538 EMBL:AF043734 EMBL:AY051732 RefSeq:NP_608447.1
UniGene:Dm.2162 ProteinModelPortal:O18413 SMR:O18413 DIP:DIP-20087N
IntAct:O18413 MINT:MINT-759582 STRING:O18413 PaxDb:O18413
PRIDE:O18413 EnsemblMetazoa:FBtr0077189 GeneID:33105
KEGG:dme:Dmel_CG1489 CTD:33105 FlyBase:FBgn0020369
InParanoid:O18413 OrthoDB:EOG47D7XJ PhylomeDB:O18413
GenomeRNAi:33105 NextBio:781933 Bgee:O18413 GermOnline:CG1489
Uniprot:O18413
Length = 405
Score = 123 (48.4 bits), Expect = 4.3e-05, P = 4.3e-05
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L +AVA FI ++ L K+ E ++V+++F
Sbjct: 185 VLLYGPPGTGKTLLARAVAHHTECT---------FIRVSGSELVQKFIGEGSRMVRELFV 235
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
+E + S++ +DEI+S+ +R SG + S+ R + +L Q+D
Sbjct: 236 MARE---HAPSII--FMDEIDSIGSSRIESGSGGD-SEVQRTMLELLNQLD 280
>ZFIN|ZDB-GENE-030616-44 [details] [associations]
symbol:atad1b "ATPase family, AAA domain containing
1b" species:7955 "Danio rerio" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0045202 "synapse" evidence=IEA] [GO:0005777 "peroxisome"
evidence=IEA] [GO:0030054 "cell junction" evidence=IEA] [GO:0045211
"postsynaptic membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
ZFIN:ZDB-GENE-030616-44 GO:GO:0005886 GO:GO:0005524 GO:GO:0005777
GO:GO:0030054 GO:GO:0045211 GO:GO:0006200 GO:GO:0016887
eggNOG:COG0464 HOGENOM:HOG000225141 HOVERGEN:HBG057074
OrthoDB:EOG412M5T GeneTree:ENSGT00550000074823 EMBL:BC095151
EMBL:AL731788 IPI:IPI00487088 RefSeq:NP_001019592.1
UniGene:Dr.78224 ProteinModelPortal:Q503W7 STRING:Q503W7
Ensembl:ENSDART00000079130 Ensembl:ENSDART00000140927 GeneID:368412
KEGG:dre:368412 CTD:368412 OMA:YQVGIAD NextBio:20812908 Bgee:Q503W7
Uniprot:Q503W7
Length = 362
Score = 122 (48.0 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 34/98 (34%), Positives = 53/98 (54%)
Query: 10 SNIISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSES 69
S ++ + VLL+GPPG GKT + KA A++ R FI + +L K++ ES
Sbjct: 124 SRLLQPPKGVLLYGPPGCGKTLIAKATAKEAGFR---------FINLQPSTLTDKWYGES 174
Query: 70 GKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARES 107
KL +F+ A++ + S++ IDEI+S R R S
Sbjct: 175 QKLAAAVFSL---AIKLQPSII--FIDEIDSFLRNRSS 207
>UNIPROTKB|G4N2E6 [details] [associations]
symbol:MGG_07916 "Vacuolar protein sorting-associated
protein 4" species:242507 "Magnaporthe oryzae 70-15" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR007330 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 EMBL:CM001233 Pfam:PF04212
GO:GO:0017111 InterPro:IPR015415 Pfam:PF09336 KO:K12196
RefSeq:XP_003713158.1 ProteinModelPortal:G4N2E6 SMR:G4N2E6
EnsemblFungi:MGG_07916T0 GeneID:2683843 KEGG:mgr:MGG_07916
Uniprot:G4N2E6
Length = 427
Score = 123 (48.4 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 35/91 (38%), Positives = 55/91 (60%)
Query: 15 WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQ 74
W + +LL+GPPGTGK+ L KAVA ++ K T F ++S L SK+ ES +LV+
Sbjct: 158 W-KGILLYGPPGTGKSFLAKAVA--------TEAKST-FFSVSSSDLVSKWMGESERLVK 207
Query: 75 KMFNKIKEAVEYEESLVCLLIDEIESLTRAR 105
++F +E + S++ IDE+++L AR
Sbjct: 208 QLFAMAREN---KPSII--FIDEVDALCGAR 233
>GENEDB_PFALCIPARUM|PFL2345c [details] [associations]
symbol:PFL2345c "tat-binding protein homolog"
species:5833 "Plasmodium falciparum" [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0003712 "transcription cofactor activity" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014188
GO:GO:0006511 HSSP:Q01853 GO:GO:0017111 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM ProtClustDB:CLSZ2429412
RefSeq:XP_001350873.1 ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5
MINT:MINT-1544609 PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA
GeneID:811521 KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900
Uniprot:Q8I4U5
Length = 435
Score = 123 (48.4 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 39/126 (30%), Positives = 64/126 (50%)
Query: 5 HSKVKSNI-ISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFS 63
H ++ ++ IS + VLL+GPPGTGKT L +AVA FI ++ L
Sbjct: 201 HPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCT---------FIRVSGSELVQ 251
Query: 64 KYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNA 123
KY E ++V+++F +E + S++ +DEI+S+ R G S+ R +
Sbjct: 252 KYIGEGSRMVRELFVMARE---HAPSII--FMDEIDSIGSQRIEGEHGD--SEVQRTMME 304
Query: 124 VLTQID 129
+L Q+D
Sbjct: 305 LLNQLD 310
>UNIPROTKB|Q8I4U5 [details] [associations]
symbol:PFL2345c "Tat-binding protein homolog" species:36329
"Plasmodium falciparum 3D7" [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 EMBL:AE014188 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
ProtClustDB:CLSZ2429412 RefSeq:XP_001350873.1
ProteinModelPortal:Q8I4U5 IntAct:Q8I4U5 MINT:MINT-1544609
PRIDE:Q8I4U5 EnsemblProtists:PFL2345c:mRNA GeneID:811521
KEGG:pfa:PFL2345c EuPathDB:PlasmoDB:PF3D7_1248900 Uniprot:Q8I4U5
Length = 435
Score = 123 (48.4 bits), Expect = 4.9e-05, P = 4.9e-05
Identities = 39/126 (30%), Positives = 64/126 (50%)
Query: 5 HSKVKSNI-ISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFS 63
H ++ ++ IS + VLL+GPPGTGKT L +AVA FI ++ L
Sbjct: 201 HPEIFESLGISQPKGVLLYGPPGTGKTLLARAVAHHTDCT---------FIRVSGSELVQ 251
Query: 64 KYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNA 123
KY E ++V+++F +E + S++ +DEI+S+ R G S+ R +
Sbjct: 252 KYIGEGSRMVRELFVMARE---HAPSII--FMDEIDSIGSQRIEGEHGD--SEVQRTMME 304
Query: 124 VLTQID 129
+L Q+D
Sbjct: 305 LLNQLD 310
>UNIPROTKB|F1RRS3 [details] [associations]
symbol:NSF "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 InterPro:IPR003338
Pfam:PF02359 GO:GO:0005524 GO:GO:0017111 Gene3D:2.40.40.20
InterPro:IPR009010 SUPFAM:SSF50692 InterPro:IPR004201 Pfam:PF02933
SMART:SM01072 SMART:SM01073 GeneTree:ENSGT00530000064085
OMA:IFTLRTH EMBL:CU928092 Ensembl:ENSSSCT00000018852 Uniprot:F1RRS3
Length = 752
Score = 127 (49.8 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 35/118 (29%), Positives = 64/118 (54%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LL+GPPG GKT L + + + L+ R + K+ +N + +KY ES ++K+F
Sbjct: 256 ILLYGPPGCGKTLLARQIGKMLNAR---EPKV-----VNGPEILNKYVGESEANIRKLFA 307
Query: 79 KIKEA---VEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKK 133
+E + L ++ DEI+++ + R S+ T D VVN +L++ID +++
Sbjct: 308 DAEEEQRRLGANSGLHIIIFDEIDAICKQRGSMAGSTGVHD--TVVNQLLSKIDGVEQ 363
Score = 39 (18.8 bits), Expect = 5.2e-05, Sum P(2) = 5.2e-05
Identities = 7/10 (70%), Positives = 8/10 (80%)
Query: 20 LLHGPPGTGK 29
+L G PGTGK
Sbjct: 159 ILKGEPGTGK 168
>GENEDB_PFALCIPARUM|PF13_0033 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory
subunit, putative" species:5833 "Plasmodium falciparum" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853
GO:GO:0017111 EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 OMA:EHKEVES ProtClustDB:CLSZ2429012
GO:GO:0005838 RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1
PRIDE:Q8IEQ1 EnsemblProtists:PF13_0033:mRNA GeneID:814012
KEGG:pfa:PF13_0033 EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 122 (48.0 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 35/112 (31%), Positives = 60/112 (53%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L +A+A ++ F+ I ++ KY ES +++++MFN
Sbjct: 174 VLLYGPPGTGKTLLARAMASNINCN---------FMRIVVSAIVDKYIGESARIIREMFN 224
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV-RVVNAVLTQID 129
KE ++ ++ +DEI+++ R S GT + R + +L +D
Sbjct: 225 YAKE---HQPCII--FMDEIDAIGGRRFS--QGTSADREIQRTLMELLNHLD 269
>UNIPROTKB|Q8IEQ1 [details] [associations]
symbol:PF13_0033 "26S proteasome regulatory subunit,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0004175
"endopeptidase activity" evidence=ISS] [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0004175 GO:GO:0006511 HSSP:Q01853 GO:GO:0017111
EMBL:AL844509 KO:K03064 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
OMA:EHKEVES ProtClustDB:CLSZ2429012 GO:GO:0005838
RefSeq:XP_001349791.1 ProteinModelPortal:Q8IEQ1 PRIDE:Q8IEQ1
EnsemblProtists:PF13_0033:mRNA GeneID:814012 KEGG:pfa:PF13_0033
EuPathDB:PlasmoDB:PF3D7_1306400 Uniprot:Q8IEQ1
Length = 393
Score = 122 (48.0 bits), Expect = 5.3e-05, P = 5.3e-05
Identities = 35/112 (31%), Positives = 60/112 (53%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L +A+A ++ F+ I ++ KY ES +++++MFN
Sbjct: 174 VLLYGPPGTGKTLLARAMASNINCN---------FMRIVVSAIVDKYIGESARIIREMFN 224
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV-RVVNAVLTQID 129
KE ++ ++ +DEI+++ R S GT + R + +L +D
Sbjct: 225 YAKE---HQPCII--FMDEIDAIGGRRFS--QGTSADREIQRTLMELLNHLD 269
>TAIR|locus:2168646 [details] [associations]
symbol:AT5G53540 species:3702 "Arabidopsis thaliana"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004176
"ATP-dependent peptidase activity" evidence=IEA] [GO:0004252
"serine-type endopeptidase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002688 GO:GO:0000502 HSSP:Q01853 GO:GO:0017111
HOGENOM:HOG000225141 EMBL:AB015476 OMA:VINPLHI EMBL:AY058857
EMBL:BT002644 IPI:IPI00537305 RefSeq:NP_200166.1 UniGene:At.26650
ProteinModelPortal:Q9FJC9 SMR:Q9FJC9 PRIDE:Q9FJC9
EnsemblPlants:AT5G53540.1 GeneID:835436 KEGG:ath:AT5G53540
TAIR:At5g53540 InParanoid:Q9FJC9 PhylomeDB:Q9FJC9
ProtClustDB:CLSN2685508 Genevestigator:Q9FJC9 Uniprot:Q9FJC9
Length = 403
Score = 122 (48.0 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 33/89 (37%), Positives = 50/89 (56%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L KA+A+ +S+ FI + +L SK+F ++ KLV +F+
Sbjct: 125 VLLYGPPGTGKTMLAKAIAR------ESE---AVFINVKVSNLMSKWFGDAQKLVSAVFS 175
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARES 107
+ Y+ + IDE++S R S
Sbjct: 176 -----LAYKLQPAIIFIDEVDSFLGQRRS 199
>POMBASE|SPBC16E9.10c [details] [associations]
symbol:SPBC16E9.10c "AAA family ATPase Rix7
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000055
"ribosomal large subunit export from nucleus" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=ISO] [GO:0016887
"ATPase activity" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 PomBase:SPBC16E9.10c GO:GO:0005524 GO:GO:0005730
EMBL:CU329671 GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464
HOGENOM:HOG000223225 GO:GO:0000055 KO:K14571 OMA:NDMTLKE
OrthoDB:EOG40GH00 PIR:T39584 RefSeq:NP_595792.1
ProteinModelPortal:O14325 STRING:O14325 EnsemblFungi:SPBC16E9.10c.1
GeneID:2539968 KEGG:spo:SPBC16E9.10c NextBio:20801111
Uniprot:O14325
Length = 779
Score = 128 (50.1 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 38/98 (38%), Positives = 52/98 (53%)
Query: 17 RVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKM 76
R VLLHGPPG GKT L A+A +L + FI I++ S+ S ES K V+++
Sbjct: 209 RGVLLHGPPGCGKTMLANALANELGV---------PFISISAPSIVSGMSGESEKKVREV 259
Query: 77 FNKIKEAVEYEESLVCLL-IDEIESLTRARESVMSGTE 113
F + K CL+ IDEI+++T RES E
Sbjct: 260 FEEAKSLAP------CLMFIDEIDAVTPKRESAQREME 291
Score = 38 (18.4 bits), Expect = 5.6e-05, Sum P(2) = 5.6e-05
Identities = 7/18 (38%), Positives = 9/18 (50%)
Query: 212 SYPLQHSKHFTELVQSHP 229
S PL HS + +HP
Sbjct: 432 SLPLDHSSIIQRYLNAHP 449
>UNIPROTKB|P62194 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] [GO:0031531 "thyrotropin-releasing
hormone receptor binding" evidence=ISS] [GO:0008134 "transcription
factor binding" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
EMBL:AF069053 EMBL:BC146195 IPI:IPI00717227 RefSeq:NP_776866.1
UniGene:Bt.8062 ProteinModelPortal:P62194 SMR:P62194 STRING:P62194
PRIDE:P62194 Ensembl:ENSBTAT00000028048 GeneID:282015
KEGG:bta:282015 CTD:5705 GeneTree:ENSGT00550000074947
InParanoid:P62194 OrthoDB:EOG4MKNGF NextBio:20805880
ArrayExpress:P62194 GO:GO:0031531 Uniprot:P62194
Length = 406
Score = 122 (48.0 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L +AVA FI ++ L K+ E ++V+++F
Sbjct: 186 VLLYGPPGTGKTLLARAVAHHTDCT---------FIRVSGSELVQKFIGEGARMVRELFV 236
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
+E + S++ +DEI+S+ +R SG + S+ R + +L Q+D
Sbjct: 237 MARE---HAPSII--FMDEIDSIGSSRLEGGSGGD-SEVQRTMLELLNQLD 281
>UNIPROTKB|P62195 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0017025 "TBP-class protein binding" evidence=IEA] [GO:0031595
"nuclear proteasome complex" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=TAS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IPI] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=NAS] [GO:0008134 "transcription factor
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0043069 "negative regulation of programmed cell
death" evidence=NAS] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0003712 "transcription cofactor activity" evidence=TAS]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0000075 "cell cycle checkpoint" evidence=TAS]
[GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS]
[GO:0000084 "S phase of mitotic cell cycle" evidence=TAS]
[GO:0000209 "protein polyubiquitination" evidence=TAS] [GO:0000216
"M/G1 transition of mitotic cell cycle" evidence=TAS] [GO:0000278
"mitotic cell cycle" evidence=TAS] [GO:0002474 "antigen processing
and presentation of peptide antigen via MHC class I" evidence=TAS]
[GO:0002479 "antigen processing and presentation of exogenous
peptide antigen via MHC class I, TAP-dependent" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0005829 "cytosol"
evidence=TAS] [GO:0006521 "regulation of cellular amino acid
metabolic process" evidence=TAS] [GO:0006915 "apoptotic process"
evidence=TAS] [GO:0006977 "DNA damage response, signal transduction
by p53 class mediator resulting in cell cycle arrest" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0016032 "viral
reproduction" evidence=TAS] [GO:0016070 "RNA metabolic process"
evidence=TAS] [GO:0016071 "mRNA metabolic process" evidence=TAS]
[GO:0031145 "anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
EMBL:L38810 GO:GO:0005829 GO:GO:0005524 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0016071 GO:GO:0045892 Reactome:REACT_115566 GO:GO:0045893
GO:GO:0005654 GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300
GO:GO:0006977 GO:GO:0042981 GO:GO:0000082 GO:GO:0031410
GO:GO:0016887 GO:GO:0006366 GO:GO:0043069 GO:GO:0051436
EMBL:CH471109 GO:GO:0003712 GO:GO:0000216 GO:GO:0000209
GO:GO:0000084 GO:GO:0031145 GO:GO:0051437 GO:GO:0006521
Reactome:REACT_383 EMBL:AC015651 ChiTaRS:PSMC5 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624 KO:K03066
OMA:QNIKVIM CTD:5705 OrthoDB:EOG4MKNGF EMBL:D44467 EMBL:AK290758
EMBL:AK291878 EMBL:BC001932 EMBL:BC002367 EMBL:AF035309
IPI:IPI00023919 PIR:S60343 PIR:S65536 RefSeq:NP_001186092.1
RefSeq:NP_002796.4 UniGene:Hs.79387 PDB:2KRK PDB:3KW6 PDBsum:2KRK
PDBsum:3KW6 ProteinModelPortal:P62195 SMR:P62195 IntAct:P62195
MINT:MINT-5004394 STRING:P62195 PhosphoSite:P62195 DMDM:49065819
PaxDb:P62195 PRIDE:P62195 DNASU:5705 Ensembl:ENST00000310144
Ensembl:ENST00000375812 Ensembl:ENST00000580864
Ensembl:ENST00000581882 GeneID:5705 KEGG:hsa:5705 UCSC:uc002jcb.3
GeneCards:GC17P061904 HGNC:HGNC:9552 HPA:HPA017871 MIM:601681
neXtProt:NX_P62195 PharmGKB:PA33897 InParanoid:P62195
PhylomeDB:P62195 EvolutionaryTrace:P62195 GenomeRNAi:5705
NextBio:22166 ArrayExpress:P62195 Bgee:P62195 CleanEx:HS_PSMC5
Genevestigator:P62195 GermOnline:ENSG00000087191 Uniprot:P62195
Length = 406
Score = 122 (48.0 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L +AVA FI ++ L K+ E ++V+++F
Sbjct: 186 VLLYGPPGTGKTLLARAVAHHTDCT---------FIRVSGSELVQKFIGEGARMVRELFV 236
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
+E + S++ +DEI+S+ +R SG + S+ R + +L Q+D
Sbjct: 237 MARE---HAPSII--FMDEIDSIGSSRLEGGSGGD-SEVQRTMLELLNQLD 281
>UNIPROTKB|P62197 [details] [associations]
symbol:PSMC5 "26S protease regulatory subunit 8"
species:9823 "Sus scrofa" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0008134 "transcription factor binding"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031410 "cytoplasmic vesicle" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0017111 "nucleoside-triphosphatase
activity" evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0045892 GO:GO:0043161 GO:GO:0031410 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:X89718 EMBL:X89719 RefSeq:NP_999148.1 UniGene:Ssc.5451
ProteinModelPortal:P62197 SMR:P62197 STRING:P62197 PRIDE:P62197
Ensembl:ENSSSCT00000018819 GeneID:397043 KEGG:ssc:397043 CTD:397043
Uniprot:P62197
Length = 406
Score = 122 (48.0 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L +AVA FI ++ L K+ E ++V+++F
Sbjct: 186 VLLYGPPGTGKTLLARAVAHHTDCT---------FIRVSGSELVQKFIGEGARMVRELFV 236
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
+E + S++ +DEI+S+ +R SG + S+ R + +L Q+D
Sbjct: 237 MARE---HAPSII--FMDEIDSIGSSRLEGGSGGD-SEVQRTMLELLNQLD 281
>UNIPROTKB|Q4RG45 [details] [associations]
symbol:GSTENG00035021001 "Chromosome 2 SCAF15106, whole
genome shotgun sequence." species:99883 "Tetraodon nigroviridis"
[GO:0000502 "proteasome complex" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
[GO:0008134 "transcription factor binding" evidence=ISS]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=ISS] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0043161 GO:GO:0000502
GO:GO:0017111 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:CAAE01015106
ProteinModelPortal:Q4RG45 STRING:Q4RG45 Uniprot:Q4RG45
Length = 406
Score = 122 (48.0 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L +AVA FI ++ L K+ E ++V+++F
Sbjct: 186 VLLYGPPGTGKTLLARAVAHHTDCT---------FIRVSGSELVQKFIGEGARMVRELFV 236
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
+E + S++ +DEI+S+ +R SG + S+ R + +L Q+D
Sbjct: 237 MARE---HAPSII--FMDEIDSIGSSRLEGGSGGD-SEVQRTMLELLNQLD 281
>MGI|MGI:105047 [details] [associations]
symbol:Psmc5 "protease (prosome, macropain) 26S subunit,
ATPase 5" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000502 "proteasome complex"
evidence=ISO] [GO:0005102 "receptor binding" evidence=IPI]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO]
[GO:0005675 "holo TFIIH complex" evidence=ISA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=ISO;ISA] [GO:0008233
"peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017025 "TBP-class protein binding" evidence=ISO] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=ISO] [GO:0031531 "thyrotropin-releasing hormone receptor
binding" evidence=ISO] [GO:0031595 "nuclear proteasome complex"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 MGI:MGI:105047
GO:GO:0005524 GO:GO:0005737 GO:GO:0045892 GO:GO:0043161
GO:GO:0031410 GO:GO:0017111 GO:GO:0008134 GO:GO:0005675
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109 GO:GO:0022624
KO:K03066 OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947
OrthoDB:EOG4MKNGF GO:GO:0031531 EMBL:Z54219 EMBL:AK010505
EMBL:AK135451 EMBL:AK145703 IPI:IPI00135640 PIR:S61923
RefSeq:NP_032976.1 UniGene:Mm.272361 ProteinModelPortal:P62196
SMR:P62196 IntAct:P62196 STRING:P62196 PhosphoSite:P62196
REPRODUCTION-2DPAGE:IPI00135640 REPRODUCTION-2DPAGE:P62196
PaxDb:P62196 PRIDE:P62196 Ensembl:ENSMUST00000021049 GeneID:19184
KEGG:mmu:19184 InParanoid:P62196 NextBio:295882 Bgee:P62196
Genevestigator:P62196 GermOnline:ENSMUSG00000020708 Uniprot:P62196
Length = 406
Score = 122 (48.0 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L +AVA FI ++ L K+ E ++V+++F
Sbjct: 186 VLLYGPPGTGKTLLARAVAHHTDCT---------FIRVSGSELVQKFIGEGARMVRELFV 236
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
+E + S++ +DEI+S+ +R SG + S+ R + +L Q+D
Sbjct: 237 MARE---HAPSII--FMDEIDSIGSSRLEGGSGGD-SEVQRTMLELLNQLD 281
>RGD|708376 [details] [associations]
symbol:Psmc5 "proteasome (prosome, macropain) 26S subunit,
ATPase, 5" species:10116 "Rattus norvegicus" [GO:0000502
"proteasome complex" evidence=ISO;ISS] [GO:0005102 "receptor
binding" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO;ISS;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;ISS] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0008134 "transcription factor binding" evidence=ISO;ISS]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0017025 "TBP-class
protein binding" evidence=IPI] [GO:0022624 "proteasome accessory
complex" evidence=ISO;ISS] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA;ISO] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISO;ISS] [GO:0031595 "nuclear proteasome
complex" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISO;ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:708376 GO:GO:0005524
GO:GO:0005737 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0016887 GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0022624 HOGENOM:HOG000225143 KO:K03066
OMA:QNIKVIM CTD:5705 GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:D83521 EMBL:AB000491 EMBL:AB000493 EMBL:BC058462
IPI:IPI00213587 PIR:T43799 RefSeq:NP_112411.1 UniGene:Rn.10972
ProteinModelPortal:P62198 SMR:P62198 IntAct:P62198 STRING:P62198
PhosphoSite:P62198 World-2DPAGE:0004:P62198 PRIDE:P62198
Ensembl:ENSRNOT00000013997 GeneID:81827 KEGG:rno:81827
UCSC:RGD:708376 InParanoid:P62198 NextBio:615767
ArrayExpress:P62198 Genevestigator:P62198
GermOnline:ENSRNOG00000010038 GO:GO:0031595 Uniprot:P62198
Length = 406
Score = 122 (48.0 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L +AVA FI ++ L K+ E ++V+++F
Sbjct: 186 VLLYGPPGTGKTLLARAVAHHTDCT---------FIRVSGSELVQKFIGEGARMVRELFV 236
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
+E + S++ +DEI+S+ +R SG + S+ R + +L Q+D
Sbjct: 237 MARE---HAPSII--FMDEIDSIGSSRLEGGSGGD-SEVQRTMLELLNQLD 281
>ZFIN|ZDB-GENE-030131-6547 [details] [associations]
symbol:psmc5 "proteasome (prosome, macropain) 26S
subunit, ATPase, 5" species:7955 "Danio rerio" [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0030163 "protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0000502 "proteasome complex" evidence=IEA;ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 ZFIN:ZDB-GENE-030131-6547 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0043161 GO:GO:0000502 GO:GO:0017111
GO:GO:0008134 eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 OMA:QNIKVIM CTD:5705
GeneTree:ENSGT00550000074947 OrthoDB:EOG4MKNGF GO:GO:0031531
EMBL:CU459020 EMBL:BC078375 IPI:IPI00482097 RefSeq:NP_001003740.1
UniGene:Dr.75934 STRING:Q6AZC1 Ensembl:ENSDART00000106191
GeneID:445285 KEGG:dre:445285 InParanoid:Q6AZC1 NextBio:20832032
Uniprot:Q6AZC1
Length = 406
Score = 122 (48.0 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L +AVA FI ++ L K+ E ++V+++F
Sbjct: 186 VLLYGPPGTGKTLLARAVAHHTDCT---------FIRVSGSELVQKFIGEGARMVRELFV 236
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
+E + S++ +DEI+S+ +R SG + S+ R + +L Q+D
Sbjct: 237 MARE---HAPSII--FMDEIDSIGSSRLEGGSGGD-SEVQRTMLELLNQLD 281
>UNIPROTKB|F1NU79 [details] [associations]
symbol:PSMC5 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IEA]
[GO:0031531 "thyrotropin-releasing hormone receptor binding"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0045892 GO:GO:0043161 GO:GO:0031410
GO:GO:0017111 TIGRFAMs:TIGR01242 OMA:QNIKVIM
GeneTree:ENSGT00550000074947 EMBL:AADN02056696 IPI:IPI00574684
Ensembl:ENSGALT00000000469 Uniprot:F1NU79
Length = 412
Score = 122 (48.0 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L +AVA FI ++ L K+ E ++V+++F
Sbjct: 192 VLLYGPPGTGKTLLARAVAHHTDCT---------FIRVSGSELVQKFIGEGARMVRELFV 242
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
+E + S++ +DEI+S+ +R SG + S+ R + +L Q+D
Sbjct: 243 MARE---HAPSII--FMDEIDSIGSSRLEGGSGGD-SEVQRTMLELLNQLD 287
>UNIPROTKB|Q6AZU7 [details] [associations]
symbol:Q6AZU7 "Putative uncharacterized protein"
species:8355 "Xenopus laevis" [GO:0000502 "proteasome complex"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0005737
"cytoplasm" evidence=ISS] [GO:0008134 "transcription factor
binding" evidence=ISS] [GO:0031531 "thyrotropin-releasing hormone
receptor binding" evidence=ISS] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0043161
GO:GO:0000502 GO:GO:0017111 GO:GO:0008134 TIGRFAMs:TIGR01242
HOVERGEN:HBG000109 GO:GO:0031531 EMBL:BC077223
ProteinModelPortal:Q6AZU7 Uniprot:Q6AZU7
Length = 414
Score = 122 (48.0 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L +AVA FI ++ L K+ E ++V+++F
Sbjct: 194 VLLYGPPGTGKTLLARAVAHHTDCT---------FIRVSGSELVQKFIGEGARMVRELFV 244
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
+E + S++ +DEI+S+ +R SG + S+ R + +L Q+D
Sbjct: 245 MARE---HAPSII--FMDEIDSIGSSRLEGGSGGD-SEVQRTMLELLNQLD 289
>UNIPROTKB|Q6P380 [details] [associations]
symbol:psmc5 "Putative uncharacterized protein MGC75584"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0000502
"proteasome complex" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0008134
"transcription factor binding" evidence=ISS] [GO:0031531
"thyrotropin-releasing hormone receptor binding" evidence=ISS]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0043161 GO:GO:0000502 GO:GO:0017111 GO:GO:0008134
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOVERGEN:HBG000109
HOGENOM:HOG000225143 KO:K03066 CTD:5705 OrthoDB:EOG4MKNGF
GO:GO:0031531 EMBL:BC064153 RefSeq:NP_989358.1 UniGene:Str.3783
ProteinModelPortal:Q6P380 STRING:Q6P380 GeneID:394988
KEGG:xtr:394988 Xenbase:XB-GENE-999928 InParanoid:Q6P380
Uniprot:Q6P380
Length = 414
Score = 122 (48.0 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 36/111 (32%), Positives = 59/111 (53%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL+GPPGTGKT L +AVA FI ++ L K+ E ++V+++F
Sbjct: 194 VLLYGPPGTGKTLLARAVAHHTDCT---------FIRVSGSELVQKFIGEGARMVRELFV 244
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
+E + S++ +DEI+S+ +R SG + S+ R + +L Q+D
Sbjct: 245 MARE---HAPSII--FMDEIDSIGSSRLEGGSGGD-SEVQRTMLELLNQLD 289
>WB|WBGene00004503 [details] [associations]
symbol:rpt-3 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0008340 "determination of
adult lifespan" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005634 GO:GO:0008340
GO:GO:0009792 GO:GO:0005737 GO:GO:0002119 GO:GO:0000003
GO:GO:0030163 GO:GO:0000502 GO:GO:0017111 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK
EMBL:FO081210 PIR:A88485 RefSeq:NP_498429.1
ProteinModelPortal:P46502 SMR:P46502 DIP:DIP-24412N IntAct:P46502
MINT:MINT-212949 STRING:P46502 PaxDb:P46502
EnsemblMetazoa:F23F12.6.1 EnsemblMetazoa:F23F12.6.2 GeneID:175925
KEGG:cel:CELE_F23F12.6 UCSC:F23F12.6.1 CTD:175925 WormBase:F23F12.6
GeneTree:ENSGT00550000074962 InParanoid:P46502 NextBio:890338
Uniprot:P46502
Length = 414
Score = 122 (48.0 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 38/130 (29%), Positives = 61/130 (46%)
Query: 1 MKFSHSKVKSNI-ISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSH 59
+ +H ++ I I R VL++GPPG GKT L KAVA + FI +
Sbjct: 179 LPLTHGELYQQIGIDPPRGVLMYGPPGCGKTMLAKAVAANTA---------ASFIRVVGS 229
Query: 60 SLFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVR 119
KY E ++V+ +F KE S + IDEI+++ R +G + + R
Sbjct: 230 EFVQKYLGEGPRMVRDVFRLAKE-----NSPSIIFIDEIDAIATKRFDAQTGAD-REVQR 283
Query: 120 VVNAVLTQID 129
++ +L Q+D
Sbjct: 284 ILLELLNQMD 293
>WB|WBGene00004506 [details] [associations]
symbol:rpt-6 species:6239 "Caenorhabditis elegans"
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030163 "protein
catabolic process" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0009378 "four-way junction helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0007091 "metaphase/anaphase transition of mitotic cell cycle"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0008340 GO:GO:0009792
GO:GO:0005737 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0040011 GO:GO:0030163 HSSP:Q01853 GO:GO:0017111 EMBL:Z98866
GO:GO:0007091 eggNOG:COG1222 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03066 GeneTree:ENSGT00550000074947
PIR:T27048 RefSeq:NP_499609.1 ProteinModelPortal:Q9XTT9 SMR:Q9XTT9
DIP:DIP-27139N IntAct:Q9XTT9 MINT:MINT-210855 STRING:Q9XTT9
PaxDb:Q9XTT9 EnsemblMetazoa:Y49E10.1.1 EnsemblMetazoa:Y49E10.1.2
GeneID:176661 KEGG:cel:CELE_Y49E10.1 UCSC:Y49E10.1 CTD:176661
WormBase:Y49E10.1 InParanoid:Q9XTT9 OMA:IDDQIRE NextBio:893504
Uniprot:Q9XTT9
Length = 416
Score = 122 (48.0 bits), Expect = 5.9e-05, P = 5.9e-05
Identities = 36/111 (32%), Positives = 58/111 (52%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
VLL GPPGTGKT L +AVA FI ++ L K+ E ++V+++F
Sbjct: 196 VLLFGPPGTGKTLLARAVAHHTECT---------FIRVSGSELVQKFIGEGARMVRELFV 246
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
+E + S++ +DEI+S+ +R SG + S+ R + +L Q+D
Sbjct: 247 MARE---HAPSII--FMDEIDSIGSSRVEGSSGGD-SEVQRTMLELLNQLD 291
>FB|FBgn0005322 [details] [associations]
symbol:nmd "no mitochondrial derivative" species:7227
"Drosophila melanogaster" [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0005783 "endoplasmic reticulum" evidence=ISS]
[GO:0007286 "spermatid development" evidence=TAS] [GO:0005741
"mitochondrial outer membrane" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0048190 "wing disc dorsal/ventral
pattern formation" evidence=IGI] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0048190 EMBL:AE014134
GO:GO:0005741 GO:GO:0007286 GO:GO:0016887 HSSP:Q01853
eggNOG:COG0464 GeneTree:ENSGT00550000074823 EMBL:AY119493
RefSeq:NP_609373.1 UniGene:Dm.11450 SMR:Q9VL02 IntAct:Q9VL02
MINT:MINT-282656 STRING:Q9VL02 EnsemblMetazoa:FBtr0080065
GeneID:44021 KEGG:dme:Dmel_CG5395 UCSC:CG5395-RA CTD:44021
FlyBase:FBgn0005322 InParanoid:Q9VL02 OMA:EMCRNAS OrthoDB:EOG4PG4GP
GenomeRNAi:44021 NextBio:836621 Uniprot:Q9VL02
Length = 369
Score = 121 (47.7 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 38/106 (35%), Positives = 56/106 (52%)
Query: 3 FSHSKVKSNIISWN--RVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHS 60
F HSK+ W + VLLHGPPG GKT + KA A++ +R FI ++
Sbjct: 123 FKHSKL------WQAPKGVLLHGPPGCGKTLIAKATAKEAGMR---------FINLDVAI 167
Query: 61 LFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLL-IDEIESLTRAR 105
L K++ ES KL +F+ + +E C++ IDEI+S R+R
Sbjct: 168 LTDKWYGESQKLTSAVFS-LASRIE-----PCIIFIDEIDSFLRSR 207
>UNIPROTKB|Q719N1 [details] [associations]
symbol:SPAST "Spastin" species:9823 "Sus scrofa"
[GO:0015630 "microtubule cytoskeleton" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0005783 "endoplasmic
reticulum" evidence=ISS] [GO:0007109 "cytokinesis, completion of
separation" evidence=ISS] [GO:0001578 "microtubule bundle
formation" evidence=ISS] [GO:0051260 "protein homooligomerization"
evidence=ISS] [GO:0051013 "microtubule severing" evidence=ISS]
[GO:0034214 "protein hexamerization" evidence=ISS] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=ISS] [GO:0048487
"beta-tubulin binding" evidence=ISS] [GO:0043014 "alpha-tubulin
binding" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005768 "endosome" evidence=ISS] [GO:0030496 "midbody"
evidence=ISS] [GO:0008568 "microtubule-severing ATPase activity"
evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0005819 "spindle" evidence=IEA] [GO:0005815
"microtubule organizing center" evidence=IEA] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005874
"microtubule" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR017179 Pfam:PF00004
PIRSF:PIRSF037338 PROSITE:PS00674 SMART:SM00382 GO:GO:0005783
GO:GO:0016021 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0007399 GO:GO:0030154 GO:GO:0005819 GO:GO:0005768
GO:GO:0051260 GO:GO:0005815 GO:GO:0007049 Pfam:PF04212
eggNOG:COG0464 GO:GO:0006888 GO:GO:0007109 GO:GO:0048487
GO:GO:0008017 HSSP:O75351 GO:GO:0008568 GO:GO:0001578 GO:GO:0051013
GO:GO:0005874 GO:GO:0043014 SMART:SM00745 GO:GO:0034214
HOGENOM:HOG000225146 KO:K13254 HAMAP:MF_03021 CTD:6683
HOVERGEN:HBG108502 OrthoDB:EOG4NZTTF EMBL:AF540879
RefSeq:NP_998914.1 UniGene:Ssc.19685 STRING:Q719N1 GeneID:396584
KEGG:ssc:396584 Uniprot:Q719N1
Length = 613
Score = 124 (48.7 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 37/89 (41%), Positives = 49/89 (55%)
Query: 17 RVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKM 76
R +LL GPPG GKT L KAVA + + F I++ SL SKY E KLV+ +
Sbjct: 373 RGLLLFGPPGNGKTMLAKAVAAESN---------ATFFNISAASLTSKYVGEGEKLVRAL 423
Query: 77 FNKIKEAVEYEESLVCLLIDEIESLTRAR 105
F A E + S++ IDE++SL R R
Sbjct: 424 F---AVARELQPSII--FIDEVDSLLRER 447
>UNIPROTKB|Q58576 [details] [associations]
symbol:pan "Proteasome-activating nucleotidase"
species:243232 "Methanocaldococcus jannaschii DSM 2661" [GO:0003924
"GTPase activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0010498 "proteasomal protein catabolic process" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0022623
"proteasome-activating nucleotidase complex" evidence=IDA]
[GO:0043273 "CTPase activity" evidence=IDA] [GO:0043335 "protein
unfolding" evidence=IDA] HAMAP:MF_00553 InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005737 GO:GO:0003924 GO:GO:0016887 GO:GO:0010498
GO:GO:0022623 GO:GO:0043335 GO:GO:0043273 EMBL:L77117
GenomeReviews:L77117_GR PIR:G64446 RefSeq:NP_248170.1 PDB:3H43
PDB:3H4M PDB:3IPM PDBsum:3H43 PDBsum:3H4M PDBsum:3IPM
ProteinModelPortal:Q58576 SMR:Q58576 PRIDE:Q58576 GeneID:1452074
KEGG:mja:MJ_1176 eggNOG:COG1222 KO:K03420 OMA:RVNERKA
ProtClustDB:PRK03992 EvolutionaryTrace:Q58576 InterPro:IPR023501
TIGRFAMs:TIGR01242 Uniprot:Q58576
Length = 430
Score = 122 (48.0 bits), Expect = 6.2e-05, P = 6.2e-05
Identities = 35/111 (31%), Positives = 56/111 (50%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LL+GPPGTGKT L KAVA + + FI + L K+ E LV+ +F
Sbjct: 207 ILLYGPPGTGKTLLAKAVATETN---------ATFIRVVGSELVKKFIGEGASLVKDIFK 257
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQID 129
KE S++ IDEI+++ R ++G + + R + +L ++D
Sbjct: 258 LAKEKAP---SII--FIDEIDAIAAKRTDALTGGD-REVQRTLMQLLAEMD 302
>DICTYBASE|DDB_G0270784 [details] [associations]
symbol:psmC1 "TAT binding protein alpha"
species:44689 "Dictyostelium discoideum" [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0030587 "sorocarp development"
evidence=IMP] [GO:0000910 "cytokinesis" evidence=IMP] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0270784 GO:GO:0005524 GO:GO:0005634
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0045335
GO:GO:0030587 GO:GO:0000910 GO:GO:0030163 GO:GO:0000502
GO:GO:0017111 HSSP:Q9WZ49 eggNOG:COG1222 TIGRFAMs:TIGR01242
KO:K03062 OMA:FIRNQER RefSeq:XP_646726.1 ProteinModelPortal:Q55BV5
STRING:Q55BV5 PRIDE:Q55BV5 EnsemblProtists:DDB0232964
GeneID:8617698 KEGG:ddi:DDB_G0270784 ProtClustDB:PTZ00361
Uniprot:Q55BV5
Length = 439
Score = 122 (48.0 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 42/130 (32%), Positives = 65/130 (50%)
Query: 1 MKFSHSKVKSNI-ISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSH 59
+ +H ++ I I + V+L+G PGTGKT L KAVA + S F+ +
Sbjct: 202 LPLTHPELYEEIGIKPPKGVILYGEPGTGKTLLAKAVANQTS---------ATFLRVVGS 252
Query: 60 SLFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVR 119
L KY + KLV+++F + A E S+V IDEI+++ R SG E + R
Sbjct: 253 ELIQKYLGDGPKLVRELF---RVADECAPSIV--FIDEIDAVGTKRYDSQSGGE-REIQR 306
Query: 120 VVNAVLTQID 129
+ +L Q+D
Sbjct: 307 TMLELLNQLD 316
>FB|FBgn0031519 [details] [associations]
symbol:CG3326 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005813 "centrosome" evidence=IDA]
[GO:0036078 "minus-end specific microtubule depolymerization"
evidence=IMP] [GO:0008568 "microtubule-severing ATPase activity"
evidence=IMP] [GO:0005694 "chromosome" evidence=IDA] [GO:0051013
"microtubule severing" evidence=IMP] [GO:0000070 "mitotic sister
chromatid segregation" evidence=IMP] [GO:0000091 "mitotic anaphase
A" evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005813 GO:GO:0005694 EMBL:AE014134
GO:GO:0000287 GO:GO:0000070 eggNOG:COG0464 GO:GO:0008568
GO:GO:0051013 InterPro:IPR015415 Pfam:PF09336 HSSP:P43773
GeneTree:ENSGT00570000078874 EMBL:AY058790 RefSeq:NP_608763.2
ProteinModelPortal:Q9VQN8 SMR:Q9VQN8 PaxDb:Q9VQN8 PRIDE:Q9VQN8
EnsemblMetazoa:FBtr0077603 EnsemblMetazoa:FBtr0331372 GeneID:33544
KEGG:dme:Dmel_CG3326 UCSC:CG3326-RA FlyBase:FBgn0031519
InParanoid:Q9VQN8 OMA:AWNEIYG OrthoDB:EOG41RN95 PhylomeDB:Q9VQN8
GenomeRNAi:33544 NextBio:784133 Bgee:Q9VQN8 GO:GO:0036078
GO:GO:0000091 Uniprot:Q9VQN8
Length = 523
Score = 123 (48.4 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 36/91 (39%), Positives = 49/91 (53%)
Query: 17 RVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKM 76
R VLL GPPGTGKT + K++A Q+K K F IN SL SK+ ++ KLV+ +
Sbjct: 284 RGVLLFGPPGTGKTLIAKSIAS------QAKAK---FFSINPSSLTSKWVGDAEKLVKTL 334
Query: 77 FNKIKEAVEYEESLVCLLIDEIESLTRARES 107
F AV + IDE++SL R +
Sbjct: 335 F-----AVAAAHQPAIIFIDEVDSLLSKRSA 360
>DICTYBASE|DDB_G0284347 [details] [associations]
symbol:vps4 "MIT domain-containing protein"
species:44689 "Dictyostelium discoideum" [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0005768 "endosome" evidence=IEA;ISS] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0031902 "late endosome membrane"
evidence=IEA] [GO:0010008 "endosome membrane" evidence=IEA]
InterPro:IPR007330 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
dictyBase:DDB_G0284347 GO:GO:0005524 GenomeReviews:CM000153_GR
GO:GO:0031902 GO:GO:0015031 GO:GO:0005768 GO:GO:0016197
Pfam:PF04212 eggNOG:COG0464 GO:GO:0017111 HSSP:O75351
InterPro:IPR015415 Pfam:PF09336 EMBL:AAFI02000064 KO:K12196
OMA:AKCAEYL RefSeq:XP_638572.1 ProteinModelPortal:Q54PT2 SMR:Q54PT2
STRING:Q54PT2 EnsemblProtists:DDB0234037 GeneID:8624544
KEGG:ddi:DDB_G0284347 ProtClustDB:CLSZ2430261 Uniprot:Q54PT2
Length = 444
Score = 122 (48.0 bits), Expect = 6.5e-05, P = 6.5e-05
Identities = 32/91 (35%), Positives = 53/91 (58%)
Query: 15 WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQ 74
W + +LL+GPPGTGK+ L KAVA ++S + F I+ + +K+ +S KLV+
Sbjct: 168 W-KGILLYGPPGTGKSYLAKAVATEIS---------STFFSISPSDIVTKWLGDSEKLVK 217
Query: 75 KMFNKIKEAVEYEESLVCLLIDEIESLTRAR 105
++F +E S++ IDE++SL +R
Sbjct: 218 QLFEMAREK---NNSVI--FIDEVDSLCSSR 243
>GENEDB_PFALCIPARUM|PFD0665c [details] [associations]
symbol:PFD0665c "26s proteasome aaa-ATPase
subunit Rpt3, putative" species:5833 "Plasmodium falciparum"
[GO:0005838 "proteasome regulatory particle" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 GO:GO:0005737 GO:GO:0016887 GO:GO:0006511 HSSP:Q01853
EMBL:AL844503 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 KO:K03063
OMA:DQTTNVK ProtClustDB:PTZ00454 GO:GO:0005838
RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1 IntAct:Q8I1V1
MINT:MINT-1573247 PRIDE:Q8I1V1 EnsemblProtists:PFD0665c:mRNA
GeneID:812570 KEGG:pfa:PFD0665c EuPathDB:PlasmoDB:PF3D7_0413600
Uniprot:Q8I1V1
Length = 392
Score = 121 (47.7 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 33/117 (28%), Positives = 57/117 (48%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+L++GPPGTGKT L KAVA + + FI + KY E ++V+ +F
Sbjct: 175 ILIYGPPGTGKTMLVKAVANETQVT---------FIGVVGSEFVQKYLGEGPRMVRDVFR 225
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKKKS 135
+E S + IDE++++ R +G + + R++ +L Q+D K +
Sbjct: 226 LARE-----NSPSIIFIDEVDAIATKRFDAQTGAD-REVQRILLELLNQMDGFDKST 276
>UNIPROTKB|Q8I1V1 [details] [associations]
symbol:PFD0665c "26S proteasome AAA-ATPase subunit RPT3,
putative" species:36329 "Plasmodium falciparum 3D7" [GO:0005838
"proteasome regulatory particle" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0006511 "ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 GO:GO:0016887
GO:GO:0006511 HSSP:Q01853 EMBL:AL844503 TIGRFAMs:TIGR01242
HOGENOM:HOG000225143 KO:K03063 OMA:DQTTNVK ProtClustDB:PTZ00454
GO:GO:0005838 RefSeq:XP_001351444.1 ProteinModelPortal:Q8I1V1
IntAct:Q8I1V1 MINT:MINT-1573247 PRIDE:Q8I1V1
EnsemblProtists:PFD0665c:mRNA GeneID:812570 KEGG:pfa:PFD0665c
EuPathDB:PlasmoDB:PF3D7_0413600 Uniprot:Q8I1V1
Length = 392
Score = 121 (47.7 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 33/117 (28%), Positives = 57/117 (48%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+L++GPPGTGKT L KAVA + + FI + KY E ++V+ +F
Sbjct: 175 ILIYGPPGTGKTMLVKAVANETQVT---------FIGVVGSEFVQKYLGEGPRMVRDVFR 225
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKKKS 135
+E S + IDE++++ R +G + + R++ +L Q+D K +
Sbjct: 226 LARE-----NSPSIIFIDEVDAIATKRFDAQTGAD-REVQRILLELLNQMDGFDKST 276
>FB|FBgn0036224 [details] [associations]
symbol:Rpt4R "Regulatory particle triple-A ATPase 4-related"
species:7227 "Drosophila melanogaster" [GO:0005838 "proteasome
regulatory particle" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006974 "response to DNA damage stimulus"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005737 EMBL:AE014296
GO:GO:0006200 GO:GO:0006974 GO:GO:0016887 GO:GO:0030163 HSSP:Q01853
KO:K03064 eggNOG:COG1222 TIGRFAMs:TIGR01242
GeneTree:ENSGT00550000074826 EMBL:AY089267 RefSeq:NP_648525.1
UniGene:Dm.5141 SMR:Q9VTQ9 IntAct:Q9VTQ9 MINT:MINT-869141
STRING:Q9VTQ9 EnsemblMetazoa:FBtr0076040 GeneID:39351
KEGG:dme:Dmel_CG7257 UCSC:CG7257-RA CTD:39351 FlyBase:FBgn0036224
InParanoid:Q9VTQ9 OMA:CAIWTEA OrthoDB:EOG4VT4CM GenomeRNAi:39351
NextBio:813228 Uniprot:Q9VTQ9
Length = 398
Score = 121 (47.7 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 34/111 (30%), Positives = 61/111 (54%)
Query: 20 LLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFNK 79
LL+GPPGTGKT L +A+A ++ F+++ S ++ KY ES +L+++MF
Sbjct: 180 LLYGPPGTGKTLLARAIASQMD---------ANFLKVVSSAIVDKYIGESARLIREMF-- 228
Query: 80 IKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGV-RVVNAVLTQID 129
A +++ ++ +DEI+++ R S GT + R + +L Q+D
Sbjct: 229 -AYARDHQPCII--FMDEIDAIGGRRFS--EGTSADREIQRTLMELLNQMD 274
>TAIR|locus:2103555 [details] [associations]
symbol:CIP111 "Cam interacting protein 111" species:3702
"Arabidopsis thaliana" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0017111 "nucleoside-triphosphatase activity" evidence=IEA]
[GO:0005516 "calmodulin binding" evidence=IDA;TAS] [GO:0009535
"chloroplast thylakoid membrane" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:CP002686 GO:GO:0016887 GO:GO:0005516 HSSP:Q01853
eggNOG:COG0464 EMBL:AL390921 GO:GO:0009535 HOGENOM:HOG000223224
EMBL:AF217546 EMBL:AF217547 IPI:IPI00534707 PIR:T50927 PIR:T51257
RefSeq:NP_191228.1 UniGene:At.9830 ProteinModelPortal:Q9LET7
SMR:Q9LET7 IntAct:Q9LET7 STRING:Q9LET7 PRIDE:Q9LET7
EnsemblPlants:AT3G56690.1 GeneID:824836 KEGG:ath:AT3G56690
GeneFarm:2042 TAIR:At3g56690 InParanoid:Q9LET7 OMA:SEAKLNF
PhylomeDB:Q9LET7 ProtClustDB:CLSN2684205 Genevestigator:Q9LET7
Uniprot:Q9LET7
Length = 1022
Score = 126 (49.4 bits), Expect = 7.1e-05, P = 7.1e-05
Identities = 38/116 (32%), Positives = 60/116 (51%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+L+ GPPG KT + +AVA S+ K+ F+ + LFSK+ ES K V+ +F
Sbjct: 761 ILMFGPPGCSKTLMARAVA--------SEAKLN-FLAVKGPELFSKWVGESEKAVRSLFA 811
Query: 79 KIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKKK 134
K + S++ DEI+SL R G SD RV++ +L ++D L ++
Sbjct: 812 KARANAP---SII--FFDEIDSLASIRGKENDGVSVSD--RVMSQLLVELDGLHQR 860
>FB|FBgn0037742 [details] [associations]
symbol:Rpt3R "Regulatory particle triple-A ATPase 3-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0008540 "proteasome regulatory particle, base
subcomplex" evidence=ISS] [GO:0016887 "ATPase activity"
evidence=ISS] [GO:0030163 "protein catabolic process" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=NAS]
[GO:0006974 "response to DNA damage stimulus" evidence=IMP]
InterPro:IPR001270 InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PRINTS:PR00300
PROSITE:PS00674 SMART:SM00382 EMBL:AE014297 GO:GO:0005524
GO:GO:0005737 GO:GO:0006200 GO:GO:0006974 GO:GO:0016887
GO:GO:0030163 TIGRFAMs:TIGR01242 KO:K03063
GeneTree:ENSGT00550000074962 FlyBase:FBgn0037742 EMBL:BT016035
RefSeq:NP_649938.2 UniGene:Dm.21651 SMR:Q9VH79 STRING:Q9VH79
EnsemblMetazoa:FBtr0301536 EnsemblMetazoa:FBtr0332172 GeneID:41190
KEGG:dme:Dmel_CG9475 UCSC:CG9475-RA CTD:41190 InParanoid:Q9VH79
OMA:KQSNCLV OrthoDB:EOG49GHZ0 GenomeRNAi:41190 NextBio:822637
Uniprot:Q9VH79
Length = 405
Score = 121 (47.7 bits), Expect = 7.3e-05, P = 7.3e-05
Identities = 38/130 (29%), Positives = 61/130 (46%)
Query: 1 MKFSHSKVKSNI-ISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSH 59
+ +H+++ I I R VLL GPPG GKT L KAVA + FI +
Sbjct: 170 LPLTHAQLYKQIGIDPPRGVLLFGPPGCGKTMLAKAVAH---------HTTASFIRVVGS 220
Query: 60 SLFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVR 119
KY E ++V+ +F K+ S + IDEI+++ R +G + + R
Sbjct: 221 EFVQKYLGEGPRMVRDLFRLAKQ-----NSPSIIFIDEIDAIATKRFDAQTGAD-REVQR 274
Query: 120 VVNAVLTQID 129
++ +L Q+D
Sbjct: 275 ILLELLNQMD 284
>FB|FBgn0040208 [details] [associations]
symbol:Kat60 "Katanin 60" species:7227 "Drosophila
melanogaster" [GO:0008352 "katanin complex" evidence=ISS;NAS]
[GO:0051013 "microtubule severing" evidence=ISS;IDA;IMP;NAS]
[GO:0007017 "microtubule-based process" evidence=ISS] [GO:0008017
"microtubule binding" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008568 "microtubule-severing ATPase activity"
evidence=IDA;IMP] [GO:0005813 "centrosome" evidence=IDA]
[GO:0070462 "plus-end specific microtubule depolymerization"
evidence=IMP] [GO:0000091 "mitotic anaphase A" evidence=IMP]
[GO:0005694 "chromosome" evidence=IDA] [GO:0000070 "mitotic sister
chromatid segregation" evidence=IMP] [GO:0022416 "chaeta
development" evidence=IGI] [GO:0035220 "wing disc development"
evidence=IGI] [GO:0031122 "cytoplasmic microtubule organization"
evidence=IMP] [GO:0007019 "microtubule depolymerization"
evidence=IDA] [GO:0005938 "cell cortex" evidence=IDA] [GO:0030336
"negative regulation of cell migration" evidence=IMP] [GO:0031252
"cell leading edge" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005524 GO:GO:0005938 GO:GO:0005813
GO:GO:0005694 GO:GO:0031252 GO:GO:0030336 GO:GO:0022416
GO:GO:0035220 GO:GO:0000070 HSSP:Q01853 eggNOG:COG0464
GO:GO:0008017 GO:GO:0008568 GO:GO:0051013 InterPro:IPR015415
Pfam:PF09336 GO:GO:0031122 GO:GO:0000091 GO:GO:0070462
GO:GO:0008352 EMBL:AY071142 ProteinModelPortal:Q8SZ40 SMR:Q8SZ40
STRING:Q8SZ40 PaxDb:Q8SZ40 PRIDE:Q8SZ40 FlyBase:FBgn0040208
InParanoid:Q8SZ40 OrthoDB:EOG4573NX ChiTaRS:katanin-60
ArrayExpress:Q8SZ40 Bgee:Q8SZ40 Uniprot:Q8SZ40
Length = 572
Score = 123 (48.4 bits), Expect = 7.4e-05, P = 7.4e-05
Identities = 37/93 (39%), Positives = 50/93 (53%)
Query: 15 WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQ 74
W V+++ GPPGTGKT L KAVA + T F ++S +L SKY ES K+V+
Sbjct: 326 WKGVLMV-GPPGTGKTMLAKAVATECG---------TTFFNVSSATLTSKYRGESEKMVR 375
Query: 75 KMFNKIKEAVEYEESLVCLLIDEIESLTRARES 107
+F + Y S + IDEI+SL R S
Sbjct: 376 LLFEMARF---YAPSTI--FIDEIDSLCSRRGS 403
>TAIR|locus:2061639 [details] [associations]
symbol:RPT2b "regulatory particle AAA-ATPase 2b"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0030163
"protein catabolic process" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0000502 "proteasome complex"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007292
"female gamete generation" evidence=IGI] [GO:0010078 "maintenance
of root meristem identity" evidence=IMP] [GO:0048232 "male gamete
generation" evidence=IGI] [GO:0042023 "DNA endoreduplication"
evidence=RCA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA] [GO:0043248 "proteasome assembly"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051788 "response to misfolded protein"
evidence=RCA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 InterPro:IPR005937 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 GO:GO:0005829 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0030163
GO:GO:0000502 GO:GO:0017111 EMBL:AC006081 GO:GO:0007292
GO:GO:0010078 HSSP:P43773 GO:GO:0048232 eggNOG:COG1222
TIGRFAMs:TIGR01242 HOGENOM:HOG000225143 UniGene:At.24596 KO:K03062
ProtClustDB:CLSN2683303 EMBL:AF372977 EMBL:AY035072 EMBL:AY056335
EMBL:AY087584 IPI:IPI00521093 PIR:E84585 RefSeq:NP_179604.1
UniGene:At.13496 ProteinModelPortal:Q9SL67 SMR:Q9SL67 IntAct:Q9SL67
STRING:Q9SL67 PaxDb:Q9SL67 PRIDE:Q9SL67 EnsemblPlants:AT2G20140.1
GeneID:816533 KEGG:ath:AT2G20140 GeneFarm:1495 TAIR:At2g20140
InParanoid:Q9SL67 OMA:FIRNQER PhylomeDB:Q9SL67 Uniprot:Q9SL67
Length = 443
Score = 121 (47.7 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 41/130 (31%), Positives = 65/130 (50%)
Query: 1 MKFSHSKVKSNI-ISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSH 59
+ +H ++ +I I + V+L+G PGTGKT L KAVA S F+ +
Sbjct: 206 LPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTS---------ATFLRVVGS 256
Query: 60 SLFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVR 119
L KY + KLV+++F + A + S+V IDEI+++ R SG E + R
Sbjct: 257 ELIQKYLGDGPKLVRELF---RVADDLSPSIV--FIDEIDAVGTKRYDANSGGE-REIQR 310
Query: 120 VVNAVLTQID 129
+ +L Q+D
Sbjct: 311 TMLELLNQLD 320
>TAIR|locus:2119926 [details] [associations]
symbol:RPT2a "regulatory particle AAA-ATPase 2A"
species:3702 "Arabidopsis thaliana" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;TAS] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IGI;ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=RCA;TAS]
[GO:0009933 "meristem structural organization" evidence=IMP]
[GO:0009965 "leaf morphogenesis" evidence=IMP] [GO:0010015 "root
morphogenesis" evidence=IMP] [GO:0010078 "maintenance of root
meristem identity" evidence=IMP] [GO:0010311 "lateral root
formation" evidence=IMP] [GO:0035266 "meristem growth"
evidence=IMP] [GO:0048367 "shoot system development" evidence=IMP]
[GO:0048827 "phyllome development" evidence=IMP] [GO:0048829 "root
cap development" evidence=IMP] [GO:0046686 "response to cadmium
ion" evidence=IEP;RCA] [GO:0016020 "membrane" evidence=IDA]
[GO:0009408 "response to heat" evidence=IMP] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA;IMP] [GO:0043248 "proteasome assembly"
evidence=RCA;IMP] [GO:0048364 "root development" evidence=IMP]
[GO:0051788 "response to misfolded protein" evidence=RCA;IMP]
[GO:0080129 "proteasome core complex assembly" evidence=RCA;IMP]
[GO:0000502 "proteasome complex" evidence=IDA] [GO:0005829
"cytosol" evidence=RCA] [GO:0007292 "female gamete generation"
evidence=IGI] [GO:0048232 "male gamete generation" evidence=IGI]
[GO:0090351 "seedling development" evidence=IMP] [GO:0006094
"gluconeogenesis" evidence=RCA] [GO:0006096 "glycolysis"
evidence=RCA] [GO:0006635 "fatty acid beta-oxidation" evidence=RCA]
[GO:0009407 "toxin catabolic process" evidence=RCA] [GO:0009651
"response to salt stress" evidence=RCA] [GO:0009853
"photorespiration" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0051510 "regulation of
unidimensional cell growth" evidence=RCA] [GO:0060968 "regulation
of gene silencing" evidence=IMP] [GO:0008540 "proteasome regulatory
particle, base subcomplex" evidence=IDA] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 InterPro:IPR005937
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0046686 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0043161 GO:GO:0016020 EMBL:AL078470
EMBL:AL161574 GO:GO:0009408 GO:GO:0010311 GO:GO:0048829
GO:GO:0000502 GO:GO:0043248 GO:GO:0017111 GO:GO:0009965
GO:GO:0009933 EMBL:AL078469 GO:GO:0007292 GO:GO:0060968
GO:GO:0010078 HSSP:P43773 GO:GO:0051788 GO:GO:0090351 GO:GO:0048232
eggNOG:COG1222 TIGRFAMs:TIGR01242 HOGENOM:HOG000225143
EMBL:AF123391 EMBL:AB161192 EMBL:AY034975 IPI:IPI00538666
PIR:T08959 RefSeq:NP_194633.1 UniGene:At.24596
ProteinModelPortal:Q9SZD4 SMR:Q9SZD4 IntAct:Q9SZD4 STRING:Q9SZD4
PaxDb:Q9SZD4 PRIDE:Q9SZD4 EnsemblPlants:AT4G29040.1 GeneID:829025
KEGG:ath:AT4G29040 GeneFarm:1494 TAIR:At4g29040 InParanoid:Q9SZD4
KO:K03062 OMA:SAIVMEA PhylomeDB:Q9SZD4 ProtClustDB:CLSN2683303
GO:GO:0035266 Uniprot:Q9SZD4
Length = 443
Score = 121 (47.7 bits), Expect = 8.4e-05, P = 8.4e-05
Identities = 41/130 (31%), Positives = 65/130 (50%)
Query: 1 MKFSHSKVKSNI-ISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSH 59
+ +H ++ +I I + V+L+G PGTGKT L KAVA S F+ +
Sbjct: 206 LPLTHPELYEDIGIKPPKGVILYGEPGTGKTLLAKAVANSTS---------ATFLRVVGS 256
Query: 60 SLFSKYFSESGKLVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVR 119
L KY + KLV+++F + A + S+V IDEI+++ R SG E + R
Sbjct: 257 ELIQKYLGDGPKLVRELF---RVADDLSPSIV--FIDEIDAVGTKRYDAHSGGE-REIQR 310
Query: 120 VVNAVLTQID 129
+ +L Q+D
Sbjct: 311 TMLELLNQLD 320
>UNIPROTKB|A5GFQ7 [details] [associations]
symbol:PEX6 "Peroxisomal biogenesis factor 6" species:9823
"Sus scrofa" [GO:0032403 "protein complex binding" evidence=ISS]
[GO:0006625 "protein targeting to peroxisome" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0050821 "protein
stabilization" evidence=ISS] [GO:0042623 "ATPase activity, coupled"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0016561 "protein import into peroxisome matrix, translocation"
evidence=ISS] [GO:0008022 "protein C-terminus binding"
evidence=ISS] [GO:0007031 "peroxisome organization" evidence=ISS]
[GO:0005829 "cytosol" evidence=ISS] [GO:0005777 "peroxisome"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 GO:GO:0005829
GO:GO:0005524 GO:GO:0050821 GO:GO:0005777 GO:GO:0032403
GO:GO:0008022 eggNOG:COG0464 GO:GO:0042623 EMBL:CR956379
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP
GeneTree:ENSGT00550000074953 RefSeq:NP_001103896.1
UniGene:Ssc.19314 ProteinModelPortal:A5GFQ7 STRING:A5GFQ7
Ensembl:ENSSSCT00000001838 GeneID:100126288 KEGG:ssc:100126288
ArrayExpress:A5GFQ7 Uniprot:A5GFQ7
Length = 969
Score = 125 (49.1 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 38/114 (33%), Positives = 60/114 (52%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LLHGPPGTGKT L KAVA + S+ F+ + L + Y +S + V+++F
Sbjct: 729 LLLHGPPGTGKTLLAKAVATECSLT---------FLSVKGPELINMYVGQSEENVREVFA 779
Query: 79 KIKEAVEYEESLVCLLI-DEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQL 131
+ + A C++ DE++SL +R SG RVV+ +L ++D L
Sbjct: 780 RARAAAP------CIIFFDELDSLAPSRGR--SGDSGGVMDRVVSQLLAELDGL 825
>RGD|621637 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA;ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005777 "peroxisome"
evidence=IEA;ISO] [GO:0005778 "peroxisomal membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IEA;ISO] [GO:0006200 "ATP catabolic
process" evidence=ISO] [GO:0006625 "protein targeting to
peroxisome" evidence=ISO] [GO:0007031 "peroxisome organization"
evidence=ISO;IMP] [GO:0008022 "protein C-terminus binding"
evidence=IEA;ISO] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA;ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IEA;ISO] [GO:0042623 "ATPase activity, coupled"
evidence=IEA;ISO] [GO:0050821 "protein stabilization"
evidence=IEA;ISO] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
RGD:621637 GO:GO:0005524 GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464
GO:GO:0017111 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660
IPI:IPI00188277 RefSeq:NP_476466.1 UniGene:Rn.10675
ProteinModelPortal:P54777 STRING:P54777 PRIDE:P54777 GeneID:117265
KEGG:rno:117265 UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 125 (49.1 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 38/114 (33%), Positives = 60/114 (52%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LLHGPPGTGKT L KAVA + S+ F+ + L + Y +S + V+++F
Sbjct: 738 LLLHGPPGTGKTLLAKAVATECSLT---------FLSVKGPELINMYVGQSEENVREVFA 788
Query: 79 KIKEAVEYEESLVCLLI-DEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQL 131
+ + A C++ DE++SL +R SG RVV+ +L ++D L
Sbjct: 789 RARAAAP------CIIFFDELDSLAPSRGR--SGDSGGVMDRVVSQLLAELDGL 834
>UNIPROTKB|P54777 [details] [associations]
symbol:Pex6 "Peroxisome assembly factor 2" species:10116
"Rattus norvegicus" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0008022 "protein C-terminus
binding" evidence=IEA] [GO:0016561 "protein import into peroxisome
matrix, translocation" evidence=IEA] [GO:0032403 "protein complex
binding" evidence=IEA] [GO:0042623 "ATPase activity, coupled"
evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 RGD:621637 GO:GO:0005524
GO:GO:0007031 GO:GO:0005778 eggNOG:COG0464 GO:GO:0017111
HOGENOM:HOG000241031 KO:K13339 CTD:5190 HOVERGEN:HBG002311
OrthoDB:EOG47WNNP EMBL:D63673 EMBL:D89660 IPI:IPI00188277
RefSeq:NP_476466.1 UniGene:Rn.10675 ProteinModelPortal:P54777
STRING:P54777 PRIDE:P54777 GeneID:117265 KEGG:rno:117265
UCSC:RGD:621637 InParanoid:P54777 NextBio:620156
Genevestigator:P54777 GermOnline:ENSRNOG00000016655 Uniprot:P54777
Length = 978
Score = 125 (49.1 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 38/114 (33%), Positives = 60/114 (52%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LLHGPPGTGKT L KAVA + S+ F+ + L + Y +S + V+++F
Sbjct: 738 LLLHGPPGTGKTLLAKAVATECSLT---------FLSVKGPELINMYVGQSEENVREVFA 788
Query: 79 KIKEAVEYEESLVCLLI-DEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQL 131
+ + A C++ DE++SL +R SG RVV+ +L ++D L
Sbjct: 789 RARAAAP------CIIFFDELDSLAPSRGR--SGDSGGVMDRVVSQLLAELDGL 834
>UNIPROTKB|Q13608 [details] [associations]
symbol:PEX6 "Peroxisome assembly factor 2" species:9606
"Homo sapiens" [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0005777 "peroxisome" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0006625 "protein targeting to
peroxisome" evidence=IMP] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=IMP] [GO:0050821 "protein stabilization"
evidence=IMP] [GO:0005524 "ATP binding" evidence=IMP] [GO:0042623
"ATPase activity, coupled" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0006200 "ATP catabolic process"
evidence=IMP] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005829 GO:GO:0005524 GO:GO:0050821 GO:GO:0005777
GO:GO:0032403 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
Orphanet:912 TCDB:3.A.20.1.1 Orphanet:772 Orphanet:44 GO:GO:0016561
HOGENOM:HOG000241031 KO:K13339 EMBL:U56602 EMBL:D83703
EMBL:AF108098 EMBL:AF108095 EMBL:AF108096 EMBL:AF108097
EMBL:AB051076 EMBL:BC048331 IPI:IPI00299182 PIR:S71090
RefSeq:NP_000278.3 UniGene:Hs.656425 ProteinModelPortal:Q13608
SMR:Q13608 IntAct:Q13608 MINT:MINT-1183928 STRING:Q13608
PhosphoSite:Q13608 DMDM:12644408 PaxDb:Q13608 PRIDE:Q13608
Ensembl:ENST00000304611 GeneID:5190 KEGG:hsa:5190 UCSC:uc003otf.3
CTD:5190 GeneCards:GC06M042978 HGNC:HGNC:8859 HPA:HPA025924
MIM:601498 MIM:614862 MIM:614863 neXtProt:NX_Q13608
PharmGKB:PA33201 HOVERGEN:HBG002311 InParanoid:Q13608 OMA:SWHDVGG
OrthoDB:EOG47WNNP PhylomeDB:Q13608 GenomeRNAi:5190 NextBio:20072
ArrayExpress:Q13608 Bgee:Q13608 CleanEx:HS_PEX6
Genevestigator:Q13608 GermOnline:ENSG00000124587 Uniprot:Q13608
Length = 980
Score = 125 (49.1 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 38/114 (33%), Positives = 60/114 (52%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LLHGPPGTGKT L KAVA + S+ F+ + L + Y +S + V+++F
Sbjct: 740 LLLHGPPGTGKTLLAKAVATECSLT---------FLSVKGPELINMYVGQSEENVREVFA 790
Query: 79 KIKEAVEYEESLVCLLI-DEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQL 131
+ + A C++ DE++SL +R SG RVV+ +L ++D L
Sbjct: 791 RARAAAP------CIIFFDELDSLAPSRGR--SGDSGGVMDRVVSQLLAELDGL 836
>MGI|MGI:2385054 [details] [associations]
symbol:Pex6 "peroxisomal biogenesis factor 6" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005777 "peroxisome" evidence=ISO] [GO:0005778 "peroxisomal
membrane" evidence=ISO] [GO:0005829 "cytosol" evidence=ISO]
[GO:0006200 "ATP catabolic process" evidence=ISO] [GO:0006625
"protein targeting to peroxisome" evidence=ISO] [GO:0007031
"peroxisome organization" evidence=ISO] [GO:0008022 "protein
C-terminus binding" evidence=ISO] [GO:0016020 "membrane"
evidence=IEA] [GO:0016561 "protein import into peroxisome matrix,
translocation" evidence=ISO] [GO:0016887 "ATPase activity"
evidence=ISO] [GO:0017111 "nucleoside-triphosphatase activity"
evidence=IEA] [GO:0032403 "protein complex binding" evidence=ISO]
[GO:0042623 "ATPase activity, coupled" evidence=ISO] [GO:0050821
"protein stabilization" evidence=ISO] InterPro:IPR003593
InterPro:IPR003959 InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674
SMART:SM00382 MGI:MGI:2385054 GO:GO:0005829 GO:GO:0005524
GO:GO:0050821 GO:GO:0005778 eggNOG:COG0464 GO:GO:0042623
GO:GO:0016561 HOGENOM:HOG000241031 KO:K13339 CTD:5190
HOVERGEN:HBG002311 OMA:SWHDVGG OrthoDB:EOG47WNNP EMBL:BC003424
EMBL:AY054409 IPI:IPI00116764 RefSeq:NP_663463.1 UniGene:Mm.299399
ProteinModelPortal:Q99LC9 SMR:Q99LC9 STRING:Q99LC9
PhosphoSite:Q99LC9 PaxDb:Q99LC9 PRIDE:Q99LC9
Ensembl:ENSMUST00000002840 GeneID:224824 KEGG:mmu:224824
GeneTree:ENSGT00550000074953 InParanoid:Q99LC9 NextBio:377397
Bgee:Q99LC9 CleanEx:MM_PEX6 Genevestigator:Q99LC9
GermOnline:ENSMUSG00000002763 Uniprot:Q99LC9
Length = 981
Score = 125 (49.1 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 38/114 (33%), Positives = 60/114 (52%)
Query: 19 VLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKMFN 78
+LLHGPPGTGKT L KAVA + S+ F+ + L + Y +S + V+++F
Sbjct: 741 LLLHGPPGTGKTLLAKAVATECSLT---------FLSVKGPELINMYVGQSEENVREVFA 791
Query: 79 KIKEAVEYEESLVCLLI-DEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQL 131
+ + A C++ DE++SL +R SG RVV+ +L ++D L
Sbjct: 792 RARAAAP------CIIFFDELDSLAPSRGR--SGDSGGVMDRVVSQLLAELDGL 837
>ASPGD|ASPL0000012105 [details] [associations]
symbol:AN3691 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0032456
"endocytic recycling" evidence=IEA] [GO:0001411 "hyphal tip"
evidence=IEA] InterPro:IPR003593 InterPro:IPR003959
InterPro:IPR003960 Pfam:PF00004 PROSITE:PS00674 SMART:SM00382
GO:GO:0005524 EMBL:BN001302 GO:GO:0017111 HOGENOM:HOG000216613
EnsemblFungi:CADANIAT00005036 OMA:MDQIRPI Uniprot:C8V7L6
Length = 803
Score = 124 (48.7 bits), Expect = 8.8e-05, P = 8.8e-05
Identities = 36/91 (39%), Positives = 52/91 (57%)
Query: 17 RVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQKM 76
R +LL GPPGTGKT L +AVA +SK + F +++ +L SK+ ES KLV+ +
Sbjct: 552 RGMLLFGPPGTGKTMLARAVAT------ESK---STFFSVSASTLTSKWHGESEKLVRAL 602
Query: 77 FNKIKEAVEYEESLVCLLIDEIESLTRARES 107
F K S++ +DEI+SL +R S
Sbjct: 603 FGLAKSLAP---SII--FVDEIDSLLSSRSS 628
>TAIR|locus:2062274 [details] [associations]
symbol:CCP1 "conserved in ciliated species and in the
land plants 1" species:3702 "Arabidopsis thaliana" [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005886 "plasma membrane" evidence=ISM]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0017111
"nucleoside-triphosphatase activity" evidence=IEA] [GO:0019538
"protein metabolic process" evidence=ISS] InterPro:IPR003593
InterPro:IPR003959 Pfam:PF00004 SMART:SM00382 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0017111 EMBL:AK317096
EMBL:AK317118 IPI:IPI00534781 RefSeq:NP_973600.1 UniGene:At.47485
UniGene:At.61738 ProteinModelPortal:B9DGC0 SMR:B9DGC0 PRIDE:B9DGC0
EnsemblPlants:AT2G34560.2 GeneID:818020 KEGG:ath:AT2G34560
TAIR:At2g34560 OMA:EQNGHAN PhylomeDB:B9DGC0 Genevestigator:Q3EBN1
Uniprot:B9DGC0
Length = 393
Score = 120 (47.3 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 39/119 (32%), Positives = 63/119 (52%)
Query: 15 WNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGKLVQ 74
W + +LL GPPGTGKT L KAVA + + T F I++ S+ SK+ +S KL++
Sbjct: 145 W-KGILLFGPPGTGKTMLAKAVATECN---------TTFFNISASSVVSKWRGDSEKLIR 194
Query: 75 KMFNKIKEAVEYEESLVCLLIDEIESLTRARESVMSGTEPSDGVRVVNAVLTQIDQLKK 133
+F+ + + S + L DEI+++ R +E R+ +L Q+D L+K
Sbjct: 195 VLFDLARH---HAPSTIFL--DEIDAIISQRGGE-GRSEHEASRRLKTELLIQMDGLQK 247
>POMBASE|SPCC24B10.10c [details] [associations]
symbol:yta4 "mitochondrial outer membrane ATPase
Msp1/Yta4 (predicted)" species:4896 "Schizosaccharomyces pombe"
[GO:0005524 "ATP binding" evidence=ISM] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005741 "mitochondrial outer membrane"
evidence=ISS] [GO:0006626 "protein targeting to mitochondrion"
evidence=ISS] [GO:0016887 "ATPase activity" evidence=ISS]
InterPro:IPR003593 InterPro:IPR003959 InterPro:IPR003960
Pfam:PF00004 PROSITE:PS00674 SMART:SM00382 PomBase:SPCC24B10.10c
GO:GO:0005524 GO:GO:0006626 GO:GO:0005741 EMBL:CU329672
GO:GO:0016887 HSSP:Q01853 eggNOG:COG0464 HOGENOM:HOG000225141
OMA:VINPLHI OrthoDB:EOG4BVW3J PIR:T50417 RefSeq:NP_588013.1
ProteinModelPortal:Q9P7J5 EnsemblFungi:SPCC24B10.10c.1
GeneID:2539116 KEGG:spo:SPCC24B10.10c NextBio:20800288
Uniprot:Q9P7J5
Length = 355
Score = 119 (46.9 bits), Expect = 9.8e-05, P = 9.8e-05
Identities = 34/95 (35%), Positives = 54/95 (56%)
Query: 12 IISWNRVVLLHGPPGTGKTSLCKAVAQKLSIRLQSKYKITEFIEINSHSLFSKYFSESGK 71
++S + +LL+GPPG GKT L KA+A+ QS+ FI ++ L K+F ES K
Sbjct: 121 LLSCPKGLLLYGPPGCGKTMLAKALAK------QSQ---ATFINVSVGLLTDKWFGESNK 171
Query: 72 LVQKMFNKIKEAVEYEESLVCLLIDEIESLTRARE 106
LV +F ++ E +++ IDEI++ R R+
Sbjct: 172 LVDALFTLARKL---EPTII--FIDEIDTFLRQRQ 201
WARNING: HSPs involving 102 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.132 0.371 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 256 256 0.00086 114 3 11 22 0.45 33
32 0.48 36
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 352
No. of states in DFA: 605 (64 KB)
Total size of DFA: 180 KB (2104 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 26.58u 0.08s 26.66t Elapsed: 00:00:13
Total cpu time: 26.61u 0.08s 26.69t Elapsed: 00:00:14
Start: Thu Aug 15 13:18:56 2013 End: Thu Aug 15 13:19:10 2013
WARNINGS ISSUED: 2