BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy3998
(102 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3I33|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 2
(Hsp70-2) Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 404
Score = 184 bits (467), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 85/102 (83%), Positives = 91/102 (89%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NT+FDAKRLIGRKFED +Q D+KHWPF VVS+GGKPK+QVEYKGE K F PEEIS
Sbjct: 80 MNPTNTIFDAKRLIGRKFEDATVQSDMKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEIS 139
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLGGKV AVITVPAYFNDSQRQATKDAG
Sbjct: 140 SMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAG 181
>pdb|1QQO|A Chain A, E175s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 176 bits (446), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 89/102 (87%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDAKRLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 58 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 117
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 118 SMVLTKMKEIAEAYLGATVTNAVVTVPAYFNDSQRQATKDAG 159
>pdb|1QQM|A Chain A, D199s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 175 bits (444), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 88/102 (86%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDAKRLIGR+F+D +Q D+KHWPF VV+D G PK+QVEYKGE K F PEE+S
Sbjct: 58 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGAPKVQVEYKGETKSFYPEEVS 117
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 118 SMVLTKMKEIAEAYLGATVTNAVVTVPAYFNDSQRQATKDAG 159
>pdb|4FSV|A Chain A, Crystal Structure Of A Heat Shock 70kda Protein 2 (Hspa2)
From Homo Sapiens At 1.80 A Resolution
Length = 387
Score = 175 bits (444), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 82/101 (81%), Positives = 87/101 (86%)
Query: 2 NPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEISS 61
NP NT+FDAKRLIGRKFED +Q D KHWPF VVS+GGKPK+QVEYKGE K F PEEISS
Sbjct: 63 NPTNTIFDAKRLIGRKFEDATVQSDXKHWPFRVVSEGGKPKVQVEYKGETKTFFPEEISS 122
Query: 62 MVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
VLTK +EIAE YLGGKV AVITVPAYFNDSQRQATKDAG
Sbjct: 123 XVLTKXKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKDAG 163
>pdb|1YUW|A Chain A, Crystal Structure Of Bovine Hsc70(Aa1-554)e213aD214A
MUTANT
Length = 554
Score = 175 bits (444), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 89/102 (87%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDAKRLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 162
>pdb|2QWN|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-386aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi State
pdb|2QWO|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #1
pdb|2QWP|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The AdpPi Form #2
pdb|2QWQ|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Hydrolyzed Form
pdb|2QWR|A Chain A, Crystal Structure Of Disulfide-Bond-Crosslinked Complex Of
Bovine Hsc70 (1-394aa)r171c And Bovine Auxilin
(810-910aa)d876c In The Amppnp Intact Form
Length = 394
Score = 175 bits (444), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 89/102 (87%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDAKRLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 162
>pdb|3C7N|B Chain B, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex
Length = 554
Score = 175 bits (443), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 89/102 (87%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDAKRLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 162
>pdb|3CQX|A Chain A, Chaperone Complex
pdb|3CQX|B Chain B, Chaperone Complex
Length = 386
Score = 175 bits (443), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 89/102 (87%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDAKRLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 66 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 125
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 126 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 167
>pdb|2QW9|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo
State
pdb|2QW9|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Apo
State
pdb|2QWL|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Adp
State
pdb|2QWL|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The Adp
State
pdb|2QWM|A Chain A, Crystal Structure Of Bovine Hsc70 (1-394aa)in The AdpVi
State
pdb|2QWM|B Chain B, Crystal Structure Of Bovine Hsc70 (1-394aa)in The AdpVi
State
Length = 394
Score = 175 bits (443), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 89/102 (87%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDAKRLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 162
>pdb|1HX1|A Chain A, Crystal Structure Of A Bag Domain In Complex With The
Hsc70 Atpase Domain
Length = 400
Score = 175 bits (443), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 89/102 (87%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDAKRLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 80 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 139
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 140 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 181
>pdb|1NGA|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 175 bits (443), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 89/102 (87%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDAKRLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 162
>pdb|1BA1|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal
Mutant With Cys 17 Replaced By Lys
Length = 386
Score = 175 bits (443), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 89/102 (87%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDAKRLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 162
>pdb|1BA0|A Chain A, Heat-Shock Cognate 70kd Protein 44kd Atpase N-Terminal
1nge 3
Length = 386
Score = 175 bits (443), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 89/102 (87%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDAKRLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 162
>pdb|1NGG|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 175 bits (443), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 89/102 (87%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDAKRLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 162
>pdb|1HPM|A Chain A, How Potassium Affects The Activity Of The Molecular
Chaperone Hsc70. Ii. Potassium Binds Specifically In The
Atpase Active Site
pdb|1NGI|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
pdb|1NGJ|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
pdb|3HSC|A Chain A, Three-Dimensional Structure Of The Atpase Fragment Of A
70k Heat-Shock Cognate Protein
Length = 386
Score = 175 bits (443), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 89/102 (87%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDAKRLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 162
>pdb|1NGC|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 175 bits (443), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 89/102 (87%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDAKRLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 162
>pdb|1NGE|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 175 bits (443), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 89/102 (87%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDAKRLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 162
>pdb|1NGD|A Chain A, Structural Basis Of The 70-kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 175 bits (443), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 89/102 (87%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDAKRLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 162
>pdb|1NGF|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 175 bits (443), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 89/102 (87%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDAKRLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 162
>pdb|1NGH|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 175 bits (443), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 89/102 (87%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDAKRLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 162
>pdb|1BUP|A Chain A, T13s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 386
Score = 175 bits (443), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 89/102 (87%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDAKRLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 162
>pdb|1NGB|A Chain A, Structural Basis Of The 70-Kilodalton Heat Shock Cognate
Protein Atp Hydrolytic Activity, Ii. Structure Of The
Active Site With Adp Or Atp Bound To Wild Type And
Mutant Atpase Fragment
Length = 386
Score = 175 bits (443), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 89/102 (87%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDAKRLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 162
>pdb|2BUP|A Chain A, T13g Mutant Of The Atpase Fragment Of Bovine Hsc70
Length = 381
Score = 175 bits (443), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 89/102 (87%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDAKRLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 162
>pdb|3FZF|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH ATP
pdb|3FZH|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZK|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZL|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3FZM|A Chain A, Crystal Structures Of Hsc70BAG1 IN COMPLEX WITH SMALL
Molecule Inhibitors
pdb|3LDQ|A Chain A, Crystal Structure Of Hsc70BAG1 IN COMPLEX WITH SMALL
MOLECULE Inhibitor
pdb|3M3Z|A Chain A, Crystal Structure Of Hsc70/bag1 In Complex With Small
Molecule Inhibitor
Length = 381
Score = 174 bits (442), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 89/102 (87%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDAKRLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 162
>pdb|1ATR|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences
The Structure Of The Active Site But Is Not Essential
For Atp Hydrolysis
Length = 386
Score = 174 bits (442), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 89/102 (87%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDAKRLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 162
>pdb|1ATS|A Chain A, Threonine 204 Of The Chaperone Protein Hsc70 Influences
The Structure Of The Active Site But Is Not Essential
For Atp Hydrolysis
Length = 386
Score = 174 bits (442), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 89/102 (87%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDAKRLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 162
>pdb|1QQN|A Chain A, D206s Mutant Of Bovine 70 Kilodalton Heat Shock Protein
Length = 378
Score = 174 bits (442), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 78/102 (76%), Positives = 87/102 (85%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDAKRLIGR F+D +Q D+KHWPF VV+D G PK+QVEYKGE K F PEE+S
Sbjct: 58 MNPTNTVFDAKRLIGRAFDDAVVQSDMKHWPFMVVNDAGAPKVQVEYKGETKSFYPEEVS 117
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 118 SMVLTKMKEIAEAYLGATVTNAVVTVPAYFNDSQRQATKDAG 159
>pdb|1KAZ|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71e Mutant
Length = 381
Score = 173 bits (439), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 77/102 (75%), Positives = 89/102 (87%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDA+RLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 61 MNPTNTVFDAERLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 162
>pdb|1KAY|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71a Mutant
Length = 381
Score = 173 bits (438), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 77/102 (75%), Positives = 88/102 (86%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDA RLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 61 MNPTNTVFDAARLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 162
>pdb|2V7Z|A Chain A, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein
From Rattus Norvegicus In Post-Atp Hydrolysis State
pdb|2V7Z|B Chain B, Crystal Structure Of The 70-Kda Heat Shock Cognate Protein
From Rattus Norvegicus In Post-Atp Hydrolysis State
Length = 543
Score = 173 bits (438), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 77/102 (75%), Positives = 88/102 (86%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDAKRLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 61 MNPTNTVFDAKRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQA KDAG
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQAAKDAG 162
>pdb|1KAX|A Chain A, 70kd Heat Shock Cognate Protein Atpase Domain, K71m Mutant
Length = 381
Score = 172 bits (437), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 77/102 (75%), Positives = 88/102 (86%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP NTVFDA RLIGR+F+D +Q D+KHWPF VV+D G+PK+QVEYKGE K F PEE+S
Sbjct: 61 MNPTNTVFDAMRLIGRRFDDAVVQSDMKHWPFMVVNDAGRPKVQVEYKGETKSFYPEEVS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AV+TVPAYFNDSQRQATKDAG
Sbjct: 121 SMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATKDAG 162
>pdb|2E8A|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In
Complex With Amp-Pnp
Length = 391
Score = 171 bits (432), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 79/102 (77%), Positives = 88/102 (86%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
+NP+NTVFDAKRLIGRKF D +Q D+KHWPF V++DG KPK+QV YKGE K F PEEIS
Sbjct: 64 LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEIS 123
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AVITVPAYFNDSQRQATKDAG
Sbjct: 124 SMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAG 165
>pdb|2E88|A Chain A, Crystal Structure Of The Human Hsp70 Atpase Domain In The
Apo Form
Length = 391
Score = 171 bits (432), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 79/102 (77%), Positives = 88/102 (86%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
+NP+NTVFDAKRLIGRKF D +Q D+KHWPF V++DG KPK+QV YKGE K F PEEIS
Sbjct: 64 LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEIS 123
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AVITVPAYFNDSQRQATKDAG
Sbjct: 124 SMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAG 165
>pdb|3JXU|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 1a
(Hsp70-1) Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 409
Score = 171 bits (432), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 79/102 (77%), Positives = 88/102 (86%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
+NP+NTVFDAKRLIGRKF D +Q D+KHWPF V++DG KPK+QV YKGE K F PEEIS
Sbjct: 83 LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEIS 142
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AVITVPAYFNDSQRQATKDAG
Sbjct: 143 SMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAG 184
>pdb|3A8Y|A Chain A, Crystal Structure Of The Complex Between The Bag5 Bd5 And
Hsp70 Nbd
pdb|3A8Y|B Chain B, Crystal Structure Of The Complex Between The Bag5 Bd5 And
Hsp70 Nbd
pdb|3ATU|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp- And Mg
Ion-Bound State
pdb|3ATV|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp-Bound And
Mg Ion-Free State
pdb|3AY9|A Chain A, Crystal Structure Of Human Hsp70 Nbd In The Adp-, Mg Ion-,
And K Ion- Bound State
Length = 392
Score = 171 bits (432), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 79/102 (77%), Positives = 88/102 (86%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
+NP+NTVFDAKRLIGRKF D +Q D+KHWPF V++DG KPK+QV YKGE K F PEEIS
Sbjct: 65 LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEIS 124
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AVITVPAYFNDSQRQATKDAG
Sbjct: 125 SMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAG 166
>pdb|1HJO|A Chain A, Atpase Domain Of Human Heat Shock 70kda Protein 1
Length = 380
Score = 171 bits (432), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 79/102 (77%), Positives = 88/102 (86%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
+NP+NTVFDAKRLIGRKF D +Q D+KHWPF V++DG KPK+QV YKGE K F PEEIS
Sbjct: 59 LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEIS 118
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AVITVPAYFNDSQRQATKDAG
Sbjct: 119 SMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAG 160
>pdb|1S3X|A Chain A, The Crystal Structure Of The Human Hsp70 Atpase Domain
Length = 382
Score = 171 bits (432), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 79/102 (77%), Positives = 88/102 (86%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
+NP+NTVFDAKRLIGRKF D +Q D+KHWPF V++DG KPK+QV YKGE K F PEEIS
Sbjct: 61 LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEIS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AVITVPAYFNDSQRQATKDAG
Sbjct: 121 SMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAG 162
>pdb|3D2F|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70
pdb|3D2F|D Chain D, Crystal Structure Of A Complex Of Sse1p And Hsp70
Length = 382
Score = 171 bits (432), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 79/102 (77%), Positives = 88/102 (86%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
+NP+NTVFDAKRLIGRKF D +Q D+KHWPF V++DG KPK+QV YKGE K F PEEIS
Sbjct: 61 LNPQNTVFDAKRLIGRKFGDPVVQSDMKHWPFQVINDGDKPKVQVSYKGETKAFYPEEIS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTKM+EIAE YLG V+ AVITVPAYFNDSQRQATKDAG
Sbjct: 121 SMVLTKMKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAG 162
>pdb|3D2E|B Chain B, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
pdb|3D2E|D Chain D, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
Length = 382
Score = 164 bits (415), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 77/102 (75%), Positives = 85/102 (83%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
+NP+NTVFDAKRLIGRKF D +Q D KHWPF V++DG KPK+QV YKGE K F PEEIS
Sbjct: 61 LNPQNTVFDAKRLIGRKFGDPVVQSDXKHWPFQVINDGDKPKVQVSYKGETKAFYPEEIS 120
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
S VLTK +EIAE YLG V+ AVITVPAYFNDSQRQATKDAG
Sbjct: 121 SXVLTKXKEIAEAYLGYPVTNAVITVPAYFNDSQRQATKDAG 162
>pdb|3FE1|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
pdb|3FE1|B Chain B, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
pdb|3FE1|C Chain C, Crystal Structure Of The Human 70kda Heat Shock Protein 6
(Hsp70b') Atpase Domain In Complex With Adp And
Inorganic Phosphate
Length = 403
Score = 163 bits (412), Expect = 3e-41, Method: Composition-based stats.
Identities = 77/102 (75%), Positives = 86/102 (84%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
+NP NTVFDAKRLIGRKF D +Q D+KHWPF VVS+GGKPK++V Y+GE K F PEEIS
Sbjct: 81 LNPHNTVFDAKRLIGRKFADTTVQSDMKHWPFRVVSEGGKPKVRVCYRGEDKTFYPEEIS 140
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVL+KM+E AE YLG V AVITVPAYFNDSQRQATKDAG
Sbjct: 141 SMVLSKMKETAEAYLGQPVKHAVITVPAYFNDSQRQATKDAG 182
>pdb|3GDQ|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein
1-Like Atpase Domain In Complex With Adp And Inorganic
Phosphate
Length = 408
Score = 161 bits (407), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 75/102 (73%), Positives = 86/102 (84%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
MNP+NTVFDAKRLIGRKF D +Q D+K WPF V+++GGKPK+ V YKGE K F PEEIS
Sbjct: 85 MNPQNTVFDAKRLIGRKFNDPVVQADMKLWPFQVINEGGKPKVLVSYKGENKAFYPEEIS 144
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
SMVLTK++E AE +LG V+ AVITVPAYFNDSQRQATKDAG
Sbjct: 145 SMVLTKLKETAEAFLGHPVTNAVITVPAYFNDSQRQATKDAG 186
>pdb|3GL1|A Chain A, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A
Member Of The Hsp70 Family, From Saccharomyces
Cerevisiae
pdb|3GL1|B Chain B, Crystal Structure Of Atpase Domain Of Ssb1 Chaperone, A
Member Of The Hsp70 Family, From Saccharomyces
Cerevisiae
Length = 387
Score = 150 bits (380), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 68/102 (66%), Positives = 86/102 (84%)
Query: 1 MNPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEIS 60
+NP+NTVFDAKRLIGR+F+D+ +Q+D+K WPF V+ G P I+V+Y E K F+P+EIS
Sbjct: 66 LNPRNTVFDAKRLIGRRFDDESVQKDMKTWPFKVIDVDGNPVIEVQYLEETKTFSPQEIS 125
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
+MVLTKM+EIAE +G KV +AVITVPAYFND+QRQATKDAG
Sbjct: 126 AMVLTKMKEIAEAKIGKKVEKAVITVPAYFNDAQRQATKDAG 167
>pdb|3QFP|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) ATPASE DOMAIN
pdb|3QML|A Chain A, The Structural Analysis Of Sil1-Bip Complex Reveals The
Mechanism For Sil1 To Function As A Novel Nucleotide
Exchange Factor
pdb|3QML|B Chain B, The Structural Analysis Of Sil1-Bip Complex Reveals The
Mechanism For Sil1 To Function As A Novel Nucleotide
Exchange Factor
Length = 390
Score = 147 bits (371), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 67/101 (66%), Positives = 82/101 (81%)
Query: 2 NPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEISS 61
NP+NT+FD KRLIG K+ D+ +Q+DIKH PF VV+ GKP ++V KGE K F PEEIS
Sbjct: 72 NPQNTIFDIKRLIGLKYNDRSVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISG 131
Query: 62 MVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
M+L KM++IAE YLG KV+ AV+TVPAYFND+QRQATKDAG
Sbjct: 132 MILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAG 172
>pdb|3QFU|A Chain A, Crystal Structure Of Yeast Hsp70 (BipKAR2) COMPLEXED WITH
ADP
Length = 394
Score = 147 bits (371), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 67/101 (66%), Positives = 82/101 (81%)
Query: 2 NPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEISS 61
NP+NT+FD KRLIG K+ D+ +Q+DIKH PF VV+ GKP ++V KGE K F PEEIS
Sbjct: 76 NPQNTIFDIKRLIGLKYNDRSVQKDIKHLPFNVVNKDGKPAVEVSVKGEKKVFTPEEISG 135
Query: 62 MVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
M+L KM++IAE YLG KV+ AV+TVPAYFND+QRQATKDAG
Sbjct: 136 MILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAG 176
>pdb|3KVG|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Amppnp
pdb|3KVG|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Amppnp
pdb|3L4I|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Adp And Inorganic Phosphate
pdb|3L4I|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70
(Cgd2_20) From Cryptosporidium Parvum In Complex With
Adp And Inorganic Phosphate
pdb|3L6Q|A Chain A, Crystal Structure Of The N-Terminal Domain Of Hsp70 From
Cryptosporidium Parvum (Cgd2_20)
pdb|3L6Q|B Chain B, Crystal Structure Of The N-Terminal Domain Of Hsp70 From
Cryptosporidium Parvum (Cgd2_20)
Length = 400
Score = 145 bits (365), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 70/102 (68%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
Query: 2 NPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSD-GGKPKIQVEYKGEIKKFAPEEIS 60
NP+NTVFDAKRLIGRKF+DQ +Q D+ HWPF VV KP I V Y GE K+F EEIS
Sbjct: 77 NPENTVFDAKRLIGRKFDDQAVQSDMTHWPFKVVRGPKDKPIISVNYLGEKKEFHAEEIS 136
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
+MVL KM+EI+E YLG ++ AV+TVPAYFNDSQRQATKDAG
Sbjct: 137 AMVLQKMKEISEAYLGRQIKNAVVTVPAYFNDSQRQATKDAG 178
>pdb|3IUC|A Chain A, Crystal Structure Of The Human 70kda Heat Shock Protein 5
(BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP
pdb|3IUC|C Chain C, Crystal Structure Of The Human 70kda Heat Shock Protein 5
(BipGRP78) ATPASE DOMAIN IN COMPLEX WITH ADP
Length = 408
Score = 140 bits (354), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 70/102 (68%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
Query: 2 NPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKG-EIKKFAPEEIS 60
NP+NTVFDAKRLIGR + D +Q+DIK PF VV KP IQV+ G + K FAPEEIS
Sbjct: 85 NPENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDIGGGQTKTFAPEEIS 144
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
+MVLTKM+E AE YLG KV+ AV+TVPAYFND+QRQATKDAG
Sbjct: 145 AMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAG 186
>pdb|3LDL|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Atp
pdb|3LDL|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Atp
pdb|3LDN|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Apo Form
pdb|3LDN|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Apo Form
pdb|3LDO|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 / Bip) Atpase Domain In Complex With Amppnp
pdb|3LDO|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 / Bip) Atpase Domain In Complex With Amppnp
pdb|3LDP|A Chain A, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Small Molecule
Inhibitor
pdb|3LDP|B Chain B, Crystal Structure Of Human Grp78 (70kda Heat Shock Protein
5 BIP) Atpase Domain In Complex With Small Molecule
Inhibitor
Length = 384
Score = 140 bits (353), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/102 (68%), Positives = 81/102 (79%), Gaps = 1/102 (0%)
Query: 2 NPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKG-EIKKFAPEEIS 60
NP+NTVFDAKRLIGR + D +Q+DIK PF VV KP IQV+ G + K FAPEEIS
Sbjct: 64 NPENTVFDAKRLIGRTWNDPSVQQDIKFLPFKVVEKKTKPYIQVDIGGGQTKTFAPEEIS 123
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
+MVLTKM+E AE YLG KV+ AV+TVPAYFND+QRQATKDAG
Sbjct: 124 AMVLTKMKETAEAYLGKKVTHAVVTVPAYFNDAQRQATKDAG 165
>pdb|2KHO|A Chain A, Nmr-Rdc XRAY STRUCTURE OF E. COLI HSP70 (DNAK) CHAPERONE
(1-605) Complexed With Adp And Substrate
Length = 605
Score = 114 bits (284), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 77/102 (75%), Gaps = 5/102 (4%)
Query: 2 NPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVS-DGGKPKIQVEYKGEIKKFAPEEIS 60
NP+NT+F KRLIGR+F+D+++Q D+ PF +++ D G VE KG+ K AP +IS
Sbjct: 61 NPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDA--WVEVKGQ--KMAPPQIS 116
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
+ VL KM++ AE YLG V+EAVITVPAYFND+QRQATKDAG
Sbjct: 117 AEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158
>pdb|1DKG|D Chain D, Crystal Structure Of The Nucleotide Exchange Factor Grpe
Bound To The Atpase Domain Of The Molecular Chaperone
Dnak
Length = 383
Score = 113 bits (283), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 59/102 (57%), Positives = 77/102 (75%), Gaps = 5/102 (4%)
Query: 2 NPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVS-DGGKPKIQVEYKGEIKKFAPEEIS 60
NP+NT+F KRLIGR+F+D+++Q D+ PF +++ D G VE KG+ K AP +IS
Sbjct: 61 NPQNTLFAIKRLIGRRFQDEEVQRDVSIMPFKIIAADNGDA--WVEVKGQ--KMAPPQIS 116
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
+ VL KM++ AE YLG V+EAVITVPAYFND+QRQATKDAG
Sbjct: 117 AEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158
>pdb|4B9Q|A Chain A, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|B Chain B, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|C Chain C, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
pdb|4B9Q|D Chain D, Open Conformation Of Atp-Bound Hsp70 Homolog Dnak
Length = 605
Score = 109 bits (273), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 58/102 (56%), Positives = 76/102 (74%), Gaps = 5/102 (4%)
Query: 2 NPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVS-DGGKPKIQVEYKGEIKKFAPEEIS 60
NP+NT+F KRLIGR+F+D+++Q D+ PF +++ D G VE KG+ K AP +IS
Sbjct: 61 NPQNTLFAIKRLIGRRFQDEEVQRDVSIXPFKIIAADNGDA--WVEVKGQ--KXAPPQIS 116
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
+ VL K ++ AE YLG V+EAVITVPAYFND+QRQATKDAG
Sbjct: 117 AEVLKKXKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDAG 158
>pdb|2V7Y|A Chain A, Crystal Structure Of The Molecular Chaperone Dnak From
Geobacillus Kaustophilus Hta426 In Post-Atp Hydrolysis
State
pdb|4ANI|C Chain C, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|D Chain D, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|G Chain G, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
pdb|4ANI|H Chain H, Structural Basis For The Intermolecular Communication
Between Dnak And Grpe In The Dnak Chaperone System From
Geobacillus Kaustophilus Hta426
Length = 509
Score = 77.0 bits (188), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 63/96 (65%), Gaps = 9/96 (9%)
Query: 9 DAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEI--KKFAPEEISSMVLTK 66
+ +RL+G + Q I P T++S K + +YK EI K++ P+EIS+++L
Sbjct: 44 NGERLVGEVAKRQAITN-----PNTIISI--KRHMGTDYKVEIEGKQYTPQEISAIILQY 96
Query: 67 MREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
++ AE YLG V+ AVITVPAYFND+QRQATKDAG
Sbjct: 97 LKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAG 132
>pdb|3D2F|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70
pdb|3D2F|C Chain C, Crystal Structure Of A Complex Of Sse1p And Hsp70
Length = 675
Score = 50.4 bits (119), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 2 NPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVS-DGGKPKIQVEYKGEIKKFAPEEIS 60
N KNTV + KR+IG + +++ KH+ +V D K +V + GE F+ +++
Sbjct: 60 NIKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLA 119
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
+M + K+++ + +++ I VP ++ + QR DA
Sbjct: 120 AMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAA 161
>pdb|3C7N|A Chain A, Structure Of The Hsp110:hsc70 Nucleotide Exchange Complex
Length = 668
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 2 NPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVS-DGGKPKIQVEYKGEIKKFAPEEIS 60
N KNTV + KR+IG + +++ KH+ +V D K +V + GE F+ +++
Sbjct: 62 NIKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLA 121
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
+M + K+++ + +++ I VP ++ + QR DA
Sbjct: 122 AMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAA 163
>pdb|2QXL|A Chain A, Crystal Structure Analysis Of Sse1, A Yeast Hsp110
pdb|2QXL|B Chain B, Crystal Structure Analysis Of Sse1, A Yeast Hsp110
Length = 658
Score = 50.1 bits (118), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 53/102 (51%), Gaps = 1/102 (0%)
Query: 2 NPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVS-DGGKPKIQVEYKGEIKKFAPEEIS 60
N KNTV + KR+IG + +++ KH+ +V D K +V + GE F+ +++
Sbjct: 59 NIKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLA 118
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
+M + K+++ + +++ I VP ++ + QR DA
Sbjct: 119 AMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAA 160
>pdb|3D2E|A Chain A, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
pdb|3D2E|C Chain C, Crystal Structure Of A Complex Of Sse1p And Hsp70,
Selenomethionine- Labeled Crystals
Length = 675
Score = 47.4 bits (111), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 52/102 (50%), Gaps = 1/102 (0%)
Query: 2 NPKNTVFDAKRLIGRKFEDQKIQEDIKHWPFTVVS-DGGKPKIQVEYKGEIKKFAPEEIS 60
N KNTV + KR+IG + +++ KH+ +V D K +V + GE F+ +++
Sbjct: 60 NIKNTVANLKRIIGLDYHHPDFEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLA 119
Query: 61 SMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
+ + K+++ + +++ I VP ++ + QR DA
Sbjct: 120 AXFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADAA 161
>pdb|4GNI|A Chain A, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium
pdb|4GNI|B Chain B, Structure Of The Ssz1 Atpase Bound To Atp And Magnesium
Length = 409
Score = 40.4 bits (93), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 47/103 (45%), Gaps = 16/103 (15%)
Query: 2 NPKNTVFDAKRLIGRKFED---------QKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIK 52
NPKNTV + ++G+ F+ QE + FT+ K + E E
Sbjct: 71 NPKNTVAYFRDILGQDFKSVDPTHNHASAHPQEAGDNVVFTI-------KDKAEEDAEPS 123
Query: 53 KFAPEEISSMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQR 95
EI++ L ++ A YLG KV+ AVIT+P F + Q+
Sbjct: 124 TLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQK 166
>pdb|4A1M|A Chain A, Nmr Structure Of Protoporphyrin-Ix Bound Murine P22hbp
Length = 195
Score = 27.7 bits (60), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 27 IKHWPFTVVSDGGKPKIQVEYKG-EIKKFAPEEISSM-VLTKMREIAE---VYLGGKVSE 81
++ WP+ V+S GGK + E + E KFA E++ V +RE Y+GG +
Sbjct: 18 VETWPWQVLSTGGKEDVSYEERACEGGKFATVEVTDKPVDEALREAMPKIMKYVGGTNDK 77
Query: 82 AV---ITVPAYF 90
V +TVP F
Sbjct: 78 GVGMGMTVPVSF 89
>pdb|2GOV|A Chain A, Solution Structure Of Murine P22hbp
Length = 195
Score = 27.7 bits (60), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 27 IKHWPFTVVSDGGKPKIQVEYKG-EIKKFAPEEISSM-VLTKMREIAE---VYLGGKVSE 81
++ WP+ V+S GGK + E + E KFA E++ V +RE Y+GG +
Sbjct: 18 VETWPWQVLSTGGKEDVSYEERACEGGKFATVEVTDKPVDEALREAMPKIMKYVGGTNDK 77
Query: 82 AV---ITVPAYF 90
V +TVP F
Sbjct: 78 GVGMGMTVPVSF 89
>pdb|2HVA|A Chain A, Solution Structure Of The Haem-Binding Protein P22hbp
Length = 192
Score = 27.3 bits (59), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 36/72 (50%), Gaps = 8/72 (11%)
Query: 27 IKHWPFTVVSDGGKPKIQVEYKG-EIKKFAPEEISSM-VLTKMREIAE---VYLGGKVSE 81
++ WP+ V+S GGK + E + E KFA E++ V +RE Y+GG +
Sbjct: 15 VETWPWQVLSTGGKEDVSYEERACEGGKFATVEVTDKPVDEALREAMPKIMKYVGGTNDK 74
Query: 82 AV---ITVPAYF 90
V +TVP F
Sbjct: 75 GVGMGMTVPVSF 86
>pdb|3TQD|A Chain A, Structure Of The 3-Deoxy-D-Manno-Octulosonate
Cytidylyltransferase (Kdsb) From Coxiella Burnetii
Length = 256
Score = 25.8 bits (55), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 29/65 (44%), Gaps = 16/65 (24%)
Query: 8 FDAKRLIGRKFEDQKIQEDIKHWPFTVVSDGGKPKIQVEYKGEIKKFAPEEISSMVLTKM 67
FD+ RL G+ +V GKP IQ Y+ IK A E + + ++
Sbjct: 18 FDSTRLPGK----------------ALVDIAGKPXIQHVYESAIKSGAEEVVIATDDKRI 61
Query: 68 REIAE 72
R++AE
Sbjct: 62 RQVAE 66
>pdb|3TT3|A Chain A, Crystal Structure Of Leut In The Inward-Open Conformation
In Complex With Fab
Length = 519
Score = 25.8 bits (55), Expect = 7.3, Method: Composition-based stats.
Identities = 16/58 (27%), Positives = 26/58 (44%), Gaps = 2/58 (3%)
Query: 45 VEYKGEIKKFAPEEISSMVLTKMREIAEVYLGGKVSEAVITVPAYFNDSQRQATKDAG 102
+ Y ++K +S + + E AEV LGG +S + A+F + A AG
Sbjct: 263 ITYASAVRKDQDIVLSGLTAATLNEAAEVILGGSIS--IPAAVAFFGVANAVAIAKAG 318
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.314 0.133 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,914,415
Number of Sequences: 62578
Number of extensions: 105097
Number of successful extensions: 286
Number of sequences better than 100.0: 77
Number of HSP's better than 100.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 220
Number of HSP's gapped (non-prelim): 77
length of query: 102
length of database: 14,973,337
effective HSP length: 67
effective length of query: 35
effective length of database: 10,780,611
effective search space: 377321385
effective search space used: 377321385
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 45 (21.9 bits)