BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy40
(168 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|110767982|ref|XP_624411.2| PREDICTED: hypothetical protein LOC552027 [Apis mellifera]
gi|380027797|ref|XP_003697603.1| PREDICTED: uncharacterized protein LOC100868777 [Apis florea]
Length = 378
Score = 104 bits (260), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 61/71 (85%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ EIG+PEA ATVKK+FVGGLKD EEDDL++YF +GTI S+++VT+KETG KRGF F+
Sbjct: 95 RQEIGRPEAGATVKKLFVGGLKDDHEEDDLKQYFQSYGTINSISIVTDKETGKKRGFGFV 154
Query: 133 EFNDYDVVDKI 143
EF+DYD VDKI
Sbjct: 155 EFDDYDPVDKI 165
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 86 VKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
V+K+F+GGL + DD L+++F ++G I V ++ + +T RGF FI ++ +VD
Sbjct: 16 VRKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVD 72
>gi|332017443|gb|EGI58166.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1-like protein
[Acromyrmex echinatior]
Length = 407
Score = 103 bits (257), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 61/71 (85%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ EIG+PEA ATVKK+FVGGLKD EE+DLR+YF +G+I S+++VT+KETG KRGF F+
Sbjct: 126 RQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRGFGFV 185
Query: 133 EFNDYDVVDKI 143
EF+DYD VDKI
Sbjct: 186 EFDDYDPVDKI 196
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 86 VKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
V+K+F+GGL + DD L+++F Q+G I V ++ + +T RGF FI ++ +VD
Sbjct: 47 VRKLFIGGLDYRTTDDSLKKHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVD 103
>gi|322799899|gb|EFZ21040.1| hypothetical protein SINV_06138 [Solenopsis invicta]
Length = 373
Score = 103 bits (257), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 61/71 (85%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ EIG+PEA ATVKK+FVGGLKD EE+DLR+YF +G+I S+++VT+KETG KRGF F+
Sbjct: 88 RQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRGFGFV 147
Query: 133 EFNDYDVVDKI 143
EF+DYD VDKI
Sbjct: 148 EFDDYDPVDKI 158
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 86 VKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
V+K+F+GGL + DD L+++F Q+G I V ++ + +T RGF FI ++ +VD
Sbjct: 9 VRKLFIGGLDYRTTDDSLKKHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVD 65
>gi|340718466|ref|XP_003397688.1| PREDICTED: hypothetical protein LOC100643287 [Bombus terrestris]
Length = 379
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 61/71 (85%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ EIG+PEA ATVKK+FVGGLKD EE+DLR+YF +G+I S+++VT+KETG KRGF F+
Sbjct: 95 RQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRGFGFV 154
Query: 133 EFNDYDVVDKI 143
EF+DYD VDKI
Sbjct: 155 EFDDYDPVDKI 165
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 86 VKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
V+K+F+GGL + DD L+++F ++G I V ++ + +T RGF FI ++ +VD
Sbjct: 16 VRKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVD 72
>gi|350401887|ref|XP_003486296.1| PREDICTED: hypothetical protein LOC100748395 [Bombus impatiens]
Length = 378
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 61/71 (85%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ EIG+PEA ATVKK+FVGGLKD EE+DLR+YF +G+I S+++VT+KETG KRGF F+
Sbjct: 95 RQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRGFGFV 154
Query: 133 EFNDYDVVDKI 143
EF+DYD VDKI
Sbjct: 155 EFDDYDPVDKI 165
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 86 VKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
V+K+F+GGL + DD L+++F ++G I V ++ + +T RGF FI ++ +VD
Sbjct: 16 VRKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVD 72
>gi|383855454|ref|XP_003703227.1| PREDICTED: uncharacterized protein LOC100883215 [Megachile
rotundata]
Length = 378
Score = 103 bits (256), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 48/71 (67%), Positives = 61/71 (85%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ EIG+PEA ATVKK+FVGGLKD EE+DLR+YF +G+I S+++VT+KETG KRGF F+
Sbjct: 95 RQEIGRPEAGATVKKLFVGGLKDDHEEEDLRQYFQSYGSINSISIVTDKETGKKRGFGFV 154
Query: 133 EFNDYDVVDKI 143
EF+DYD VDKI
Sbjct: 155 EFDDYDPVDKI 165
Score = 42.0 bits (97), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 86 VKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
V+K+F+GGL + DD L+++F ++G I V ++ + +T RGF FI ++ +VD
Sbjct: 16 VRKLFIGGLDYRTTDDSLKKHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSRAHMVD 72
>gi|427777643|gb|JAA54273.1| Putative heteroproteinous nuclear ribonucleoprotein at 87f
[Rhipicephalus pulchellus]
Length = 309
Score = 102 bits (255), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 50/69 (72%), Positives = 59/69 (85%), Gaps = 1/69 (1%)
Query: 76 EIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
E G+PEA ATVKK+FVGGLKD +E DLR+YFSQFG I SVN+VT K+TG KRGFAF+E+
Sbjct: 94 EAGRPEAQATVKKVFVGGLKDDVDESDLRDYFSQFGNILSVNLVTEKDTGRKRGFAFVEY 153
Query: 135 NDYDVVDKI 143
+DYD VDKI
Sbjct: 154 DDYDPVDKI 162
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL E+ L+ +F Q+G + ++ + T RGF FI F +VD
Sbjct: 14 RKLFIGGLDYKTTEESLKGHFEQWGEVVDCVVMRDPSTKKSRGFGFITFRRAHMVD 69
>gi|241710586|ref|XP_002412054.1| RNA-binding protein musashi, putative [Ixodes scapularis]
gi|215505115|gb|EEC14609.1| RNA-binding protein musashi, putative [Ixodes scapularis]
Length = 275
Score = 102 bits (254), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 50/69 (72%), Positives = 59/69 (85%), Gaps = 1/69 (1%)
Query: 76 EIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
E G+PEA ATVKK+FVGGLKD +E DLR+YF+QFG I SVN+VT KETG KRGFAF+E+
Sbjct: 60 EAGRPEAQATVKKVFVGGLKDDVDESDLRDYFAQFGNILSVNLVTEKETGRKRGFAFVEY 119
Query: 135 NDYDVVDKI 143
+DYD VDKI
Sbjct: 120 DDYDPVDKI 128
>gi|156549026|ref|XP_001607355.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog [Nasonia vitripennis]
Length = 371
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/71 (69%), Positives = 59/71 (83%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ EIG+PEA ATVKK+FVGGLKD EEDDLR YF +G I SV++VT+K+TG KRGF F+
Sbjct: 95 RQEIGRPEAGATVKKLFVGGLKDDHEEDDLRVYFQGYGNINSVSIVTDKDTGKKRGFGFV 154
Query: 133 EFNDYDVVDKI 143
EF+DYD VDKI
Sbjct: 155 EFDDYDPVDKI 165
Score = 43.5 bits (101), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 86 VKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
V+K+F+GGL + DD L+++F Q+G I V ++ + +T RGF FI ++ +VD
Sbjct: 16 VRKLFIGGLDYRTTDDSLKKHFEQWGDIVDVVVMKDPKTKRSRGFGFITYSRAHMVD 72
>gi|321463296|gb|EFX74313.1| hypothetical protein DAPPUDRAFT_307331 [Daphnia pulex]
Length = 393
Score = 99.0 bits (245), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/68 (70%), Positives = 59/68 (86%), Gaps = 1/68 (1%)
Query: 77 IGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
IGKPEA++TVKK+FVGGL+D EE+DL++YFS FG I SVN+VT KET KRGFAF+EF+
Sbjct: 125 IGKPEASSTVKKLFVGGLRDDVEEEDLQKYFSTFGPIASVNVVTEKETNKKRGFAFVEFD 184
Query: 136 DYDVVDKI 143
DYD VDK+
Sbjct: 185 DYDPVDKV 192
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 69 PPHMDKLEIG-KPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAK 126
PP ++ + KPEA +K+F+GGL + D+ L+++F Q+G I V ++ + +T
Sbjct: 26 PPATEQHTVKEKPEAEQ-FRKLFIGGLDYRTTDESLKKHFEQWGQIVDVVVMKDPKTRKS 84
Query: 127 RGFAFIEFNDYDVVD 141
RGF F+ + +VD
Sbjct: 85 RGFGFVTYARAFMVD 99
>gi|153792009|ref|NP_001093319.1| heterogeneous nuclear ribonucleoprotein A1 [Bombyx mori]
gi|95102934|gb|ABF51408.1| heterogeneous nuclear ribonucleoprotein A1 [Bombyx mori]
Length = 316
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/95 (56%), Positives = 72/95 (75%), Gaps = 4/95 (4%)
Query: 53 MEEAQSE--EEVDMEIPGPPH-MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQ 108
++EAQ+ ++D I P + + EI +PEA+ATVKK+FV GLK D EE+DLREYFS
Sbjct: 71 VDEAQNNRPHKIDGRIVEPKRAVPREEIKRPEASATVKKLFVAGLKQDIEEEDLREYFST 130
Query: 109 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
FG I SV++VT+KETG KRGF F+EF+DYD VD++
Sbjct: 131 FGNIVSVSVVTDKETGKKRGFGFVEFDDYDPVDRV 165
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 86 VKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIR 144
+K+F+GGL + D L+E++ Q+G I V ++ + +T +GF FI ++ +VD+ +
Sbjct: 16 TRKLFIGGLDYRTTDSSLKEFYEQWGEIVDVVVMKDPKTKRSKGFGFITYSQAHMVDEAQ 75
>gi|133256|sp|P21522.1|ROA1_SCHAM RecName: Full=Heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog
gi|10107|emb|CAA38481.1| mammalian A1, A2 /B1 hnRNP homologue [Schistocerca americana]
Length = 342
Score = 96.7 bits (239), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 60/71 (84%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ EIG+PEA ATVKK+FVGG+K++ EE+DLR+YF Q+GT+ S +V +KET KRGFAF+
Sbjct: 95 RTEIGRPEAGATVKKLFVGGIKEEMEENDLRDYFKQYGTVVSAAIVVDKETRKKRGFAFV 154
Query: 133 EFNDYDVVDKI 143
EF+DYD VDKI
Sbjct: 155 EFDDYDPVDKI 165
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 41/65 (63%), Gaps = 4/65 (6%)
Query: 78 GKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 136
G+PE V+K+F+GGL + D+ L+++F Q+G I V ++ + +T RGF FI ++
Sbjct: 11 GEPE---HVRKLFIGGLDYRTTDESLKQHFEQWGEIVDVVVMKDPKTKRSRGFGFITYSR 67
Query: 137 YDVVD 141
+VD
Sbjct: 68 AHMVD 72
>gi|189234126|ref|XP_969016.2| PREDICTED: similar to mammalian A1, A2 /B1 hnRNP homologue
[Tribolium castaneum]
gi|270002487|gb|EEZ98934.1| hypothetical protein TcasGA2_TC004556 [Tribolium castaneum]
Length = 338
Score = 96.3 bits (238), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 53/95 (55%), Positives = 70/95 (73%), Gaps = 4/95 (4%)
Query: 53 MEEAQSE--EEVDMEIPGPPH-MDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQ 108
+++AQ++ +VD + P + + +IG+PEA ATVKK+FVGGLKD EE+DLRE F
Sbjct: 73 VDDAQNDRPHKVDGRVVEPKRAVPRQDIGRPEAGATVKKLFVGGLKDDVEEEDLRECFKS 132
Query: 109 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+GTI S +VT+K+TG KRGF FIEF DYD VDKI
Sbjct: 133 YGTILSCTIVTDKDTGKKRGFGFIEFEDYDPVDKI 167
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 39/64 (60%), Gaps = 2/64 (3%)
Query: 79 KPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
KPE + +K+F+GGL + D+ L+++F ++G I V ++ + T RGF FI ++
Sbjct: 12 KPE-HEQYRKLFIGGLDYRTTDESLKKHFEKWGEIVDVVVMKDPTTKRSRGFGFITYSRA 70
Query: 138 DVVD 141
+VD
Sbjct: 71 HMVD 74
>gi|357619642|gb|EHJ72132.1| heterogeneous nuclear ribonucleoprotein A1 [Danaus plexippus]
Length = 307
Score = 95.5 bits (236), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 47/69 (68%), Positives = 60/69 (86%), Gaps = 1/69 (1%)
Query: 76 EIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
EI +P+A+ATVKK+F+GG+K D EE+DLREYFS+FG I SV++VT K+TG KRGF FIEF
Sbjct: 104 EIKRPDASATVKKLFIGGIKQDIEEEDLREYFSKFGEIISVSLVTEKDTGKKRGFGFIEF 163
Query: 135 NDYDVVDKI 143
+DYD VD+I
Sbjct: 164 DDYDPVDRI 172
Score = 38.5 bits (88), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 86 VKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL D L+E++ Q+G I V ++ + +T RGF FI ++ +VD
Sbjct: 23 TRKLFIGGLDYCTTDTSLKEFYEQWGDIVDVVVMKDPQTKRSRGFGFITYSRAHMVD 79
>gi|11036|emb|CAA44502.1| hrp36.1 [Drosophila melanogaster]
Length = 326
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ EI P A ATVKK+FVGGL+D +E+ LREYF FG I SVN+V++K+TG KRGFAFI
Sbjct: 102 RQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFI 161
Query: 133 EFNDYDVVDKI 143
EF+DYD VDKI
Sbjct: 162 EFDDYDPVDKI 172
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 76 EIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
EI +PE ++K+F+GGL + DD L+ +F ++G I V ++ + +T RGF FI +
Sbjct: 16 EITEPEQ---LRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITY 72
Query: 135 NDYDVVD 141
+ ++D
Sbjct: 73 SQSYMID 79
>gi|829184|emb|CAA41170.1| heterogeneous nuclear ribonucleoprotein [Drosophila melanogaster]
Length = 386
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ EI P A ATVKK+FVGGL+D +E+ LREYF FG I SVN+V++K+TG KRGFAFI
Sbjct: 102 RQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFI 161
Query: 133 EFNDYDVVDKI 143
EF+DYD VDKI
Sbjct: 162 EFDDYDPVDKI 172
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 73 DKLEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAF 131
D EI +PE ++K+F+GGL + DD L+ +F ++G I V ++ + +T RGF F
Sbjct: 13 DGEEITEPEQ---LRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGF 69
Query: 132 IEFNDYDVVD 141
I ++ ++D
Sbjct: 70 ITYSQSYMID 79
>gi|17136624|ref|NP_476807.1| heterogeneous nuclear ribonucleoprotein at 87F, isoform A
[Drosophila melanogaster]
gi|281361714|ref|NP_001163602.1| heterogeneous nuclear ribonucleoprotein at 87F, isoform C
[Drosophila melanogaster]
gi|442618907|ref|NP_001262538.1| heterogeneous nuclear ribonucleoprotein at 87F, isoform D
[Drosophila melanogaster]
gi|442618909|ref|NP_476806.2| heterogeneous nuclear ribonucleoprotein at 87F, isoform E
[Drosophila melanogaster]
gi|78099792|sp|P48810.2|RB87F_DROME RecName: Full=Heterogeneous nuclear ribonucleoprotein 87F; AltName:
Full=HRP36.1 protein; AltName: Full=Protein P11
gi|7299788|gb|AAF54967.1| heterogeneous nuclear ribonucleoprotein at 87F, isoform A
[Drosophila melanogaster]
gi|45825065|gb|AAS77440.1| LD32727p [Drosophila melanogaster]
gi|220951504|gb|ACL88295.1| Hrb87F-PA [synthetic construct]
gi|220959722|gb|ACL92404.1| Hrb87F-PA [synthetic construct]
gi|272476964|gb|ACZ94899.1| heterogeneous nuclear ribonucleoprotein at 87F, isoform C
[Drosophila melanogaster]
gi|325530374|gb|ADZ25120.1| MIP15350p [Drosophila melanogaster]
gi|440217389|gb|AGB95920.1| heterogeneous nuclear ribonucleoprotein at 87F, isoform D
[Drosophila melanogaster]
gi|440217390|gb|AAN13574.2| heterogeneous nuclear ribonucleoprotein at 87F, isoform E
[Drosophila melanogaster]
Length = 385
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ EI P A ATVKK+FVGGL+D +E+ LREYF FG I SVN+V++K+TG KRGFAFI
Sbjct: 102 RQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFI 161
Query: 133 EFNDYDVVDKI 143
EF+DYD VDKI
Sbjct: 162 EFDDYDPVDKI 172
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 73 DKLEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAF 131
D EI +PE ++K+F+GGL + DD L+ +F ++G I V ++ + +T RGF F
Sbjct: 13 DGEEITEPEQ---LRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGF 69
Query: 132 IEFNDYDVVD 141
I ++ ++D
Sbjct: 70 ITYSQSYMID 79
>gi|8094|emb|CAA38574.1| Hrb87F [Drosophila melanogaster]
Length = 386
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ EI P A ATVKK+FVGGL+D +E+ LREYF FG I SVN+V++K+TG KRGFAFI
Sbjct: 102 RQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFI 161
Query: 133 EFNDYDVVDKI 143
EF+DYD VDKI
Sbjct: 162 EFDDYDPVDKI 172
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 73 DKLEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAF 131
D EI +PE ++K+F+GGL + DD L+ +F ++G I V ++ + +T RGF F
Sbjct: 13 DGEEITEPEQ---LRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGF 69
Query: 132 IEFNDYDVVD 141
I ++ ++D
Sbjct: 70 ITYSQSYMID 79
>gi|8318|emb|CAA42212.1| P11 (hnRNP protein) [Drosophila melanogaster]
Length = 386
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ EI P A ATVKK+FVGGL+D +E+ LREYF FG I SVN+V++K+TG KRGFAFI
Sbjct: 102 RQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFI 161
Query: 133 EFNDYDVVDKI 143
EF+DYD VDKI
Sbjct: 162 EFDDYDPVDKI 172
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 73 DKLEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAF 131
D EI +PE ++K+F+GGL + DD L+ +F ++G I V ++ + +T RGF F
Sbjct: 13 DGEEITEPEQ---LRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGF 69
Query: 132 IEFNDYDVVD 141
I ++ ++D
Sbjct: 70 ITYSQSYMID 79
>gi|195329210|ref|XP_002031304.1| GM25918 [Drosophila sechellia]
gi|194120247|gb|EDW42290.1| GM25918 [Drosophila sechellia]
Length = 385
Score = 93.6 bits (231), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ EI P A ATVKK+FVGGL+D +E+ LREYF FG I SVN+V++K+TG KRGFAFI
Sbjct: 102 RQEIDSPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVSVNIVSDKDTGKKRGFAFI 161
Query: 133 EFNDYDVVDKI 143
EF+DYD VDKI
Sbjct: 162 EFDDYDPVDKI 172
Score = 38.5 bits (88), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 73 DKLEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAF 131
D EI +PE ++K+F+GGL + D+ L+ +F ++G I V ++ + +T RGF F
Sbjct: 13 DGEEITEPEQ---LRKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGF 69
Query: 132 IEFNDYDVVD 141
I ++ ++D
Sbjct: 70 ITYSQSYMID 79
>gi|195451840|ref|XP_002073098.1| GK13334 [Drosophila willistoni]
gi|194169183|gb|EDW84084.1| GK13334 [Drosophila willistoni]
Length = 402
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/71 (66%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ EI P A ATVKK+FVGGL+D +E+ LREYF FG I VN+V++KETG KRGFAFI
Sbjct: 103 RQEIDAPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVGVNIVSDKETGKKRGFAFI 162
Query: 133 EFNDYDVVDKI 143
EF+DYD VDKI
Sbjct: 163 EFDDYDPVDKI 173
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 76 EIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
+I +PE ++K+F+GGL + D+ L+ +F ++G I V ++ + +T RGF FI +
Sbjct: 17 QISEPE---QLRKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITY 73
Query: 135 NDYDVVD 141
+ ++D
Sbjct: 74 SQSYMID 80
>gi|291243889|ref|XP_002741832.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Saccoglossus kowalevskii]
Length = 398
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 48/94 (51%), Positives = 68/94 (72%), Gaps = 2/94 (2%)
Query: 76 EIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
E G P A+ VKK+FVGG+K D ED LR+YFS++G+IESV+++++K+TG KRGFAF+ F
Sbjct: 93 ESGNPLAHMLVKKIFVGGIKEDTSEDHLRDYFSKYGSIESVDVISDKDTGKKRGFAFVTF 152
Query: 135 NDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYNIE 167
+D+D VDKI G + ND+ V K V K ++
Sbjct: 153 DDHDPVDKIVGLKYHTINDHKSEVKKAVPKQELQ 186
Score = 39.3 bits (90), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 38/66 (57%), Gaps = 4/66 (6%)
Query: 77 IGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
I +PE ++K+F+GGL + DD L+ +FS++G I ++ + T RGF FI +
Sbjct: 6 INEPEQ---LRKLFIGGLNYETTDDSLKGHFSEWGEIVDCVVMKDPNTKKSRGFGFITYK 62
Query: 136 DYDVVD 141
+VD
Sbjct: 63 RASMVD 68
>gi|195113429|ref|XP_002001270.1| GI10692 [Drosophila mojavensis]
gi|193917864|gb|EDW16731.1| GI10692 [Drosophila mojavensis]
Length = 379
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ EI P A ATVKK+FVGGL+D +E+ LREYF +FG I VN+V++K+TG KRGFAFI
Sbjct: 103 RQEIDAPNAGATVKKLFVGGLRDDHDEECLREYFKEFGQIVGVNIVSDKDTGKKRGFAFI 162
Query: 133 EFNDYDVVDKI 143
EF+DYD VDKI
Sbjct: 163 EFDDYDPVDKI 173
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 76 EIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
+I +PE ++K+F+GGL + D+ L+ +F ++G I V ++ + +T RGF FI +
Sbjct: 17 QISEPE---QLRKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITY 73
Query: 135 NDYDVVD 141
+ ++D
Sbjct: 74 SQSYMID 80
>gi|195036930|ref|XP_001989921.1| GH19058 [Drosophila grimshawi]
gi|193894117|gb|EDV92983.1| GH19058 [Drosophila grimshawi]
Length = 379
Score = 92.0 bits (227), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ EI P A ATVKK+FVGGL+D +E+ LREYF +FG I VN+V++K+TG KRGFAFI
Sbjct: 103 RQEIDAPNAGATVKKLFVGGLRDDHDEECLREYFKEFGQIVGVNIVSDKDTGKKRGFAFI 162
Query: 133 EFNDYDVVDKI 143
EF+DYD VDKI
Sbjct: 163 EFDDYDPVDKI 173
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 76 EIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
+I +PE ++K+F+GGL + D+ L+ +F ++G I V ++ + +T RGF FI +
Sbjct: 17 QISEPEQ---LRKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITY 73
Query: 135 NDYDVVD 141
+ ++D
Sbjct: 74 SQSYMID 80
>gi|195390403|ref|XP_002053858.1| GJ23111 [Drosophila virilis]
gi|194151944|gb|EDW67378.1| GJ23111 [Drosophila virilis]
Length = 382
Score = 92.0 bits (227), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ EI P A ATVKK+FVGGL+D +E+ LREYF +FG I VN+V++K+TG KRGFAFI
Sbjct: 103 RQEIDAPNAGATVKKLFVGGLRDDHDEECLREYFKEFGQIVGVNIVSDKDTGKKRGFAFI 162
Query: 133 EFNDYDVVDKI 143
EF+DYD VDKI
Sbjct: 163 EFDDYDPVDKI 173
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 76 EIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
+I +PE ++K+F+GGL + D+ L+ +F ++G I V ++ + +T RGF FI +
Sbjct: 17 QISEPE---QLRKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITY 73
Query: 135 NDYDVVD 141
+ ++D
Sbjct: 74 SQSYMID 80
>gi|193688245|ref|XP_001946219.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1, A2/B1
homolog [Acyrthosiphon pisum]
Length = 350
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/71 (63%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
K +IGKPEA ATVKK+FVG L D E+DL+EYFS +G + S +V +KETG KRGF F+
Sbjct: 86 KTDIGKPEAGATVKKLFVGLLNDSITEEDLKEYFSPYGNVTSAALVVHKETGKKRGFGFV 145
Query: 133 EFNDYDVVDKI 143
EF+DYD VDKI
Sbjct: 146 EFDDYDPVDKI 156
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 86 VKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIR 144
++K+FVGGL + D +L++YF Q+G I V ++ + +T RGF FI + +VD +
Sbjct: 7 LRKLFVGGLDYKTTDENLKKYFEQWGEIMDVVVMKDPQTKRSRGFGFITYAAAHMVDDAQ 66
Query: 145 G 145
G
Sbjct: 67 G 67
>gi|198452965|ref|XP_002137573.1| GA26465 [Drosophila pseudoobscura pseudoobscura]
gi|198132155|gb|EDY68131.1| GA26465 [Drosophila pseudoobscura pseudoobscura]
Length = 401
Score = 91.7 bits (226), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ EI P A ATVKK+FVGGL+D +E+ LREYF FG I VN+V++K+TG KRGFAFI
Sbjct: 103 RQEIDAPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVGVNIVSDKDTGKKRGFAFI 162
Query: 133 EFNDYDVVDKI 143
EF+DYD VDKI
Sbjct: 163 EFDDYDPVDKI 173
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 76 EIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
+I +PE ++K+F+GGL + DD L+ +F ++G I V ++ + +T RGF FI +
Sbjct: 17 QITEPE---QLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITY 73
Query: 135 NDYDVVD 141
+ ++D
Sbjct: 74 SQSYMID 80
>gi|389608641|dbj|BAM17930.1| heterogeneous nuclear ribonucleoprotein [Papilio xuthus]
Length = 314
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 57/71 (80%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ +I PEA ATV+K+F+GG+KD ED LREYFS +G +++V++VT+K TG KRGF F+
Sbjct: 96 RQDIKNPEAGATVRKLFIGGIKDDHTEDQLREYFSNYGNVQNVSIVTDKATGKKRGFGFV 155
Query: 133 EFNDYDVVDKI 143
EF+DYD VDK+
Sbjct: 156 EFDDYDPVDKV 166
Score = 36.6 bits (83), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + D+ L+ +F ++G I V ++ + +T RGF FI ++ +VD
Sbjct: 18 RKIFIGGLNYRTTDESLKAHFEKWGEIVDVVVMKDTKTKRSRGFGFITYSKAHMVD 73
>gi|194741290|ref|XP_001953122.1| GF17368 [Drosophila ananassae]
gi|190626181|gb|EDV41705.1| GF17368 [Drosophila ananassae]
Length = 385
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ EI P A ATVKK+FVGGL+D +E+ LREYF FG I VN+V++K+TG KRGFAFI
Sbjct: 102 RQEIDAPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVGVNIVSDKDTGKKRGFAFI 161
Query: 133 EFNDYDVVDKI 143
EF+DYD VDKI
Sbjct: 162 EFDDYDPVDKI 172
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 76 EIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
EI +PE ++K+F+GGL + D+ L+ +F ++G I V ++ + +T RGF FI +
Sbjct: 16 EITEPE---QLRKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGFITY 72
Query: 135 NDYDVVD 141
+ ++D
Sbjct: 73 SQSYMID 79
>gi|195500856|ref|XP_002097553.1| GE24426 [Drosophila yakuba]
gi|194183654|gb|EDW97265.1| GE24426 [Drosophila yakuba]
Length = 391
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ EI P A ATVKK+FVGGL+D +E+ LREYF FG I VN+V++K+TG KRGFAFI
Sbjct: 102 RQEIDAPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVGVNIVSDKDTGKKRGFAFI 161
Query: 133 EFNDYDVVDKI 143
EF+DYD VDKI
Sbjct: 162 EFDDYDPVDKI 172
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 73 DKLEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAF 131
D EI +PE ++K+F+GGL + D+ L+ +F ++G I V ++ + +T RGF F
Sbjct: 13 DGDEITEPE---QLRKLFIGGLDYRTTDEGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGF 69
Query: 132 IEFNDYDVVD 141
I ++ ++D
Sbjct: 70 ITYSQSYMID 79
>gi|194901402|ref|XP_001980241.1| GG17033 [Drosophila erecta]
gi|190651944|gb|EDV49199.1| GG17033 [Drosophila erecta]
Length = 392
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ EI P A ATVKK+FVGGL+D +E+ LREYF FG I VN+V++K+TG KRGFAFI
Sbjct: 102 RQEIDAPNAGATVKKLFVGGLRDDHDEECLREYFKDFGQIVGVNIVSDKDTGKKRGFAFI 161
Query: 133 EFNDYDVVDKI 143
EF+DYD VDKI
Sbjct: 162 EFDDYDPVDKI 172
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 73 DKLEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAF 131
D EI +PE ++K+F+GGL + DD L+ +F ++G I V ++ + +T RGF F
Sbjct: 13 DGDEITEPE---QLRKLFIGGLDYRTTDDGLKAHFEKWGNIVDVVVMKDPKTKRSRGFGF 69
Query: 132 IEFNDYDVVD 141
I ++ ++D
Sbjct: 70 ITYSQSYMID 79
>gi|357619641|gb|EHJ72131.1| heterogeneous nuclear ribonucleoprotein A1 [Danaus plexippus]
Length = 315
Score = 91.3 bits (225), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 58/71 (81%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ +I PEA ATVKK+F+GG+KD +E+ LREYFS +G +++V++VT+K TG KRGF F+
Sbjct: 95 RQDIKNPEAGATVKKLFIGGIKDDHDEEQLREYFSNYGNVQNVSIVTDKGTGKKRGFGFV 154
Query: 133 EFNDYDVVDKI 143
EF+DYD VDKI
Sbjct: 155 EFDDYDPVDKI 165
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + D+ L+ +F ++G I V ++ + +T RGF FI ++ +VD
Sbjct: 17 RKIFIGGLNYRTSDESLKAHFEKWGEIVDVVVMKDPKTKRSRGFGFITYSKAHMVD 72
>gi|195445835|ref|XP_002070507.1| GK12096 [Drosophila willistoni]
gi|194166592|gb|EDW81493.1| GK12096 [Drosophila willistoni]
Length = 385
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 43/71 (60%), Positives = 55/71 (77%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ +I P A ATVKK+FVG LKD +E LR+YFS FG+I +N+V +KETG KRGFAF+
Sbjct: 108 RQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFSNFGSIVDINIVMDKETGKKRGFAFV 167
Query: 133 EFNDYDVVDKI 143
EF+DYD VDK+
Sbjct: 168 EFDDYDPVDKV 178
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 73 DKLEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAF 131
D I +PE ++K+F+GGL + D +L+ +F ++G I V ++ + T RGF F
Sbjct: 19 DDDSITEPEH---MRKLFIGGLDYRTSDENLKAHFEKWGQIVDVVVMKDPRTKRSRGFGF 75
Query: 132 IEFNDYDVVD 141
I ++ ++D
Sbjct: 76 ITYSHSSMID 85
>gi|195158385|ref|XP_002020072.1| GL13791 [Drosophila persimilis]
gi|194116841|gb|EDW38884.1| GL13791 [Drosophila persimilis]
Length = 431
Score = 89.4 bits (220), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ +I P A ATVKK+FVG LKD +E LR+YF FG+I +N+V +KETG KRGFAF+
Sbjct: 104 RQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHFGSIVDINIVMDKETGKKRGFAFV 163
Query: 133 EFNDYDVVDKI 143
EF+DYD VDK+
Sbjct: 164 EFDDYDPVDKV 174
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 76 EIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
+I +PE ++K+F+GGL + DD L+ +F ++G I V ++ + T RGF FI +
Sbjct: 18 DITEPEH---MRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITY 74
Query: 135 NDYDVVD 141
+ ++D
Sbjct: 75 SHSTMID 81
>gi|195055059|ref|XP_001994440.1| GH17116 [Drosophila grimshawi]
gi|193892203|gb|EDV91069.1| GH17116 [Drosophila grimshawi]
Length = 379
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ EI P A ATVKK+FVG LKD +E LR+YF +G+I +N+V +KETG KRGFAF+
Sbjct: 105 RQEIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHYGSIVDINIVMDKETGKKRGFAFV 164
Query: 133 EFNDYDVVDKI 143
EF+DYD VDK+
Sbjct: 165 EFDDYDPVDKV 175
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 73 DKLEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAF 131
D I +PE ++K+F+GGL + DD L+ +F ++G I V ++ + T RGF F
Sbjct: 16 DDDSITEPEH---MRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGF 72
Query: 132 IEFNDYDVVD 141
I ++ +VD
Sbjct: 73 ITYSHSSMVD 82
>gi|198450175|ref|XP_002137048.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
gi|198130926|gb|EDY67606.1| GA26796 [Drosophila pseudoobscura pseudoobscura]
Length = 368
Score = 89.0 bits (219), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ +I P A ATVKK+FVG LKD +E LR+YF FG+I +N+V +KETG KRGFAF+
Sbjct: 104 RQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHFGSIVDINIVMDKETGKKRGFAFV 163
Query: 133 EFNDYDVVDKI 143
EF+DYD VDK+
Sbjct: 164 EFDDYDPVDKV 174
Score = 38.9 bits (89), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 76 EIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
+I +PE ++K+F+GGL + DD L+ +F ++G I V ++ + T RGF FI +
Sbjct: 18 DITEPEH---MRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGFITY 74
Query: 135 NDYDVVD 141
+ ++D
Sbjct: 75 SHSTMID 81
>gi|195574505|ref|XP_002105229.1| GD21374 [Drosophila simulans]
gi|194201156|gb|EDX14732.1| GD21374 [Drosophila simulans]
Length = 2951
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 66/99 (66%), Gaps = 4/99 (4%)
Query: 49 NNKAMEEAQSE--EEVDMEIPGPPH-MDKLEIGKPEANATVKKMFVGGLKD-QEEDDLRE 104
++ ++EAQ ++D + P + + +I P A ATVKK+FVG LKD +E +R+
Sbjct: 2667 HSSMIDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRD 2726
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF FG I +N+V +KETG KRGFAF+EF+DYD VDK+
Sbjct: 2727 YFQNFGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKV 2765
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 77 IGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
I +PE ++K+F+GGL + D +L+ +F ++G I V ++ + T RGF FI ++
Sbjct: 2610 ITEPEH---MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYS 2666
Query: 136 DYDVVD 141
++D
Sbjct: 2667 HSSMID 2672
>gi|34194032|gb|AAH56530.1| Hnrpa0 protein, partial [Danio rerio]
Length = 303
Score = 88.6 bits (218), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 69/124 (55%), Gaps = 14/124 (11%)
Query: 58 SEEEVDMEIPGPPHM------------DKLEIGKPEANATVKKMFVGGLKDQ-EEDDLRE 104
+ EE D + PH+ + + G+PEA A VKK+FVGGLKD EE DL E
Sbjct: 70 TSEEADAAMAARPHVVDGKNVEVKRAVAREDAGRPEALAKVKKIFVGGLKDDIEEKDLTE 129
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCK 163
+FSQFG IE ++T+K+TG KRGF F+ F D D DK F N + V V K + K
Sbjct: 130 FFSQFGMIEKSEVITDKDTGKKRGFGFVHFEDNDSADKAVVLKFHMINGHKVEVKKALTK 189
Query: 164 YNIE 167
I+
Sbjct: 190 QEIQ 193
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 88 KMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
K+FVGGL Q +D LR YF QFG + +V N + R F F+ ++ + D
Sbjct: 21 KLFVGGLNVQTTNDGLRSYFEQFGNLTDCVVVQNDQLQRSRCFGFVTYSTSEEAD 75
>gi|195054712|ref|XP_001994267.1| GH23661 [Drosophila grimshawi]
gi|193896137|gb|EDV95003.1| GH23661 [Drosophila grimshawi]
Length = 479
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 8/91 (8%)
Query: 81 EANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
E N +VKK+FVGGLKD +ED LREYF QFG + SV ++T+K TG +RGFAFIEF+DYD
Sbjct: 122 ETNISVKKLFVGGLKDNHDEDCLREYFLQFGNVVSVKLLTDKTTGKRRGFAFIEFDDYDA 181
Query: 140 VDKIRGFAFIEFND---YDVVDKIVCKYNIE 167
VDK A ++ Y +VD YN+E
Sbjct: 182 VDK----AILQRQHSIKYVLVDVKKSIYNLE 208
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 86 VKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
++K+F+GGL E+ L+ ++SQ+G + V ++ + T RGF FI + +VD
Sbjct: 36 LRKLFIGGLAPYTTEEGLKVFYSQWGKVVDVVVMRDAATKRSRGFGFITYTKSAMVD 92
>gi|195392302|ref|XP_002054798.1| GJ22593 [Drosophila virilis]
gi|194152884|gb|EDW68318.1| GJ22593 [Drosophila virilis]
Length = 474
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 8/91 (8%)
Query: 81 EANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
E N +VKK+FVGGLKD +ED LREYF QFG + SV ++T+K TG +RGFAFIEF+DYD
Sbjct: 120 ETNISVKKLFVGGLKDNHDEDCLREYFLQFGNVVSVKLLTDKTTGKRRGFAFIEFDDYDA 179
Query: 140 VDKIRGFAFIEFND---YDVVDKIVCKYNIE 167
VDK A ++ Y +VD YN+E
Sbjct: 180 VDK----AILQRQHSIKYVLVDVKKSIYNLE 206
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 86 VKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
++K+F+GGL E+ L+ ++SQ+G + V ++ + T RGF FI + +VD
Sbjct: 34 LRKLFIGGLAPYTTEEGLKVFYSQWGKVVDVVVMRDAATKRSRGFGFITYTKSAMVD 90
>gi|242004925|ref|XP_002423326.1| Nuclear polyadenylated RNA-binding protein, putative [Pediculus
humanus corporis]
gi|212506345|gb|EEB10588.1| Nuclear polyadenylated RNA-binding protein, putative [Pediculus
humanus corporis]
Length = 286
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 59/70 (84%), Gaps = 1/70 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ E G+P+A A++KK+F+GG+KD+ EE+DL+E+F QFG I S ++V +K++G K+GFAF+
Sbjct: 114 RTESGRPDAGASIKKLFIGGIKDEHEEEDLKEHFKQFGNIVSCSIVVDKDSGKKKGFAFV 173
Query: 133 EFNDYDVVDK 142
E++DYD VDK
Sbjct: 174 EYDDYDPVDK 183
Score = 42.4 bits (98), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 43/76 (56%), Gaps = 4/76 (5%)
Query: 67 PGPPHMDKLEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGA 125
P P K +I +PE ++K+F+GGL + D+ L+ +F ++G + V ++ + +T
Sbjct: 19 PAPAAETKTQITEPEH---LRKLFIGGLDYKTTDETLKSHFEKWGEVVDVVVMKDPKTKR 75
Query: 126 KRGFAFIEFNDYDVVD 141
RGF FI + +VD
Sbjct: 76 SRGFGFITYAKAHMVD 91
>gi|194745154|ref|XP_001955057.1| GF18582 [Drosophila ananassae]
gi|190628094|gb|EDV43618.1| GF18582 [Drosophila ananassae]
Length = 357
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ +I P A ATVKK+FVG LKD +E LR+YF FG I +N+V +KETG KRGFAF+
Sbjct: 104 RQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQNFGNIVDINIVMDKETGKKRGFAFV 163
Query: 133 EFNDYDVVDKI 143
EF+DYD VDK+
Sbjct: 164 EFDDYDPVDKV 174
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 76 EIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
EI +PE ++K+F+GGL + D +L+ +F ++G I V ++ + T RGF FI +
Sbjct: 18 EITEPEH---MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITY 74
Query: 135 NDYDVVD 141
+ ++D
Sbjct: 75 SHSSMID 81
>gi|198450380|ref|XP_001357960.2| GA19533, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198131011|gb|EAL27096.2| GA19533, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 468
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 63/90 (70%), Gaps = 6/90 (6%)
Query: 81 EANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
E N +VKK+FVGGLKD +ED LREYF QFG + SV ++T+K TG +RGFAFIEF+DYD
Sbjct: 124 ETNISVKKLFVGGLKDNHDEDCLREYFVQFGRVVSVKLLTDKTTGKRRGFAFIEFDDYDA 183
Query: 140 VDK--IRGFAFIEFNDYDVVDKIVCKYNIE 167
VDK ++ I++ DV I YN+E
Sbjct: 184 VDKAILQKQHSIKYVHVDVKKSI---YNLE 210
Score = 39.3 bits (90), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 69 PPHMDKLEIGKPEAN-----ATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKE 122
PP + +EI E + ++K+F+GGL E+ L+ ++ Q+G + V ++ +
Sbjct: 16 PPSTETIEIPDREDDDICELEHLRKLFIGGLAPYTTEEGLKVFYGQWGKVVDVVVMRDAA 75
Query: 123 TGAKRGFAFIEFNDYDVVDKIR 144
T RGF FI + +VDK +
Sbjct: 76 TKRSRGFGFITYTKSAMVDKAQ 97
>gi|195391065|ref|XP_002054186.1| GJ22934 [Drosophila virilis]
gi|194152272|gb|EDW67706.1| GJ22934 [Drosophila virilis]
Length = 355
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 54/71 (76%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ +I P A ATVKK+FVG LKD +E LR+YF +G+I +N+V +KETG KRGFAF+
Sbjct: 105 RQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHYGSIVDINIVMDKETGKKRGFAFV 164
Query: 133 EFNDYDVVDKI 143
EF+DYD VDK+
Sbjct: 165 EFDDYDPVDKV 175
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 73 DKLEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAF 131
D I +PE ++K+F+GGL + DD L+ +F ++G I V ++ + T RGF F
Sbjct: 16 DDDSITEPEH---MRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGF 72
Query: 132 IEFNDYDVVD 141
I ++ +VD
Sbjct: 73 ITYSHSSMVD 82
>gi|390177202|ref|XP_003736301.1| GA19533, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388858945|gb|EIM52374.1| GA19533, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 462
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/90 (54%), Positives = 63/90 (70%), Gaps = 6/90 (6%)
Query: 81 EANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
E N +VKK+FVGGLKD +ED LREYF QFG + SV ++T+K TG +RGFAFIEF+DYD
Sbjct: 124 ETNISVKKLFVGGLKDNHDEDCLREYFVQFGRVVSVKLLTDKTTGKRRGFAFIEFDDYDA 183
Query: 140 VDK--IRGFAFIEFNDYDVVDKIVCKYNIE 167
VDK ++ I++ DV I YN+E
Sbjct: 184 VDKAILQKQHSIKYVHVDVKKSI---YNLE 210
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 69 PPHMDKLEIGKPEAN-----ATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKE 122
PP + +EI E + ++K+F+GGL E+ L+ ++ Q+G + V ++ +
Sbjct: 16 PPSTETIEIPDREDDDICELEHLRKLFIGGLAPYTTEEGLKVFYGQWGKVVDVVVMRDAA 75
Query: 123 TGAKRGFAFIEFNDYDVVDKIR 144
T RGF FI + +VDK +
Sbjct: 76 TKRSRGFGFITYTKSAMVDKAQ 97
>gi|195503950|ref|XP_002098871.1| GE10609 [Drosophila yakuba]
gi|194184972|gb|EDW98583.1| GE10609 [Drosophila yakuba]
Length = 473
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 63/90 (70%), Gaps = 6/90 (6%)
Query: 81 EANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
E N +VKK+FVGGLKD +ED LREYF QFG + SV ++T+K TG +RGFAF+EF+DYD
Sbjct: 118 ETNISVKKLFVGGLKDNHDEDCLREYFLQFGRVVSVKLLTDKTTGKRRGFAFVEFDDYDA 177
Query: 140 VDK--IRGFAFIEFNDYDVVDKIVCKYNIE 167
VDK ++ I++ DV I YN+E
Sbjct: 178 VDKAILKKQHSIKYVHVDVKKSI---YNLE 204
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 86 VKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIR 144
++K+F+GGL ED+L+ ++ Q+G + V ++ + T RGF FI + +VDK +
Sbjct: 32 LRKLFIGGLAPYTTEDNLKVFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDKAQ 91
>gi|24650838|ref|NP_733252.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform D
[Drosophila melanogaster]
gi|24650840|ref|NP_733253.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform F
[Drosophila melanogaster]
gi|157651|gb|AAA28621.1| nuclear ribonucleoprotein [Drosophila melanogaster]
gi|16769554|gb|AAL28996.1| LD38464p [Drosophila melanogaster]
gi|23172512|gb|AAN14143.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform D
[Drosophila melanogaster]
gi|23172513|gb|AAN14144.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform F
[Drosophila melanogaster]
Length = 361
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ +I P A ATVKK+FVG LKD +E +R+YF FG I +N+V +KETG KRGFAF+
Sbjct: 105 RQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFV 164
Query: 133 EFNDYDVVDKI 143
EF+DYD VDK+
Sbjct: 165 EFDDYDPVDKV 175
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 73 DKLEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAF 131
D I +PE ++K+F+GGL + D +L+ +F ++G I V ++ + T RGF F
Sbjct: 16 DDDSITEPEH---MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGF 72
Query: 132 IEFNDYDVVD 141
I ++ ++D
Sbjct: 73 ITYSHSSMID 82
>gi|17738267|ref|NP_524543.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform B
[Drosophila melanogaster]
gi|24650836|ref|NP_733251.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform C
[Drosophila melanogaster]
gi|133253|sp|P07909.1|ROA1_DROME RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=PEN repeat clone P9;
AltName: Full=hnRNP core protein A1-A
gi|157654|gb|AAA28624.1| nulcear ribonucleoprotein [Drosophila melanogaster]
gi|908757|gb|AAA70426.1| unknown protein [Drosophila melanogaster]
gi|7301687|gb|AAF56801.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform B
[Drosophila melanogaster]
gi|23172511|gb|AAN14142.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform C
[Drosophila melanogaster]
Length = 365
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ +I P A ATVKK+FVG LKD +E +R+YF FG I +N+V +KETG KRGFAF+
Sbjct: 109 RQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFV 168
Query: 133 EFNDYDVVDKI 143
EF+DYD VDK+
Sbjct: 169 EFDDYDPVDKV 179
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 77 IGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
I +PE ++K+F+GGL + D +L+ +F ++G I V ++ + T RGF FI ++
Sbjct: 24 ITEPEH---MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYS 80
Query: 136 DYDVVD 141
++D
Sbjct: 81 HSSMID 86
>gi|195109789|ref|XP_001999464.1| GI24524 [Drosophila mojavensis]
gi|193916058|gb|EDW14925.1| GI24524 [Drosophila mojavensis]
Length = 462
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/91 (53%), Positives = 62/91 (68%), Gaps = 8/91 (8%)
Query: 81 EANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
E N +VKK+FVGGLKD +ED LREYF QFG + SV ++T+K TG +RGFAFIEF+DYD
Sbjct: 122 ETNISVKKLFVGGLKDNHDEDCLREYFLQFGNVVSVKLLTDKTTGKRRGFAFIEFDDYDA 181
Query: 140 VDKIRGFAFIEFND---YDVVDKIVCKYNIE 167
VDK A ++ Y +VD YN+E
Sbjct: 182 VDK----AILQRQHSIKYVLVDVKKSIYNLE 208
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 86 VKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
++K+F+GGL E+ L+ ++SQ+G + V ++ + T RGF FI + +VD
Sbjct: 36 LRKLFIGGLAPYTTEESLKVFYSQWGKVVDVVVMRDAATKRSRGFGFITYTKSAMVD 92
>gi|329112539|ref|NP_001192271.1| heterogeneous nuclear ribonucleoprotein A2/B1 isoform 1 [Xenopus
(Silurana) tropicalis]
Length = 350
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S +EVD + PH + + E KP A+ TVKK+FVGG+K D EE LRE
Sbjct: 59 SMDEVDASMAARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLRE 118
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G IES+ ++T+K++G KRGF F+ F+D+D VDKI
Sbjct: 119 YFEEYGKIESIEIITDKQSGKKRGFGFVTFDDHDPVDKI 157
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + ED LR Y+ Q+G + ++ + + RGF F+ F+ D VD
Sbjct: 9 RKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVD 64
>gi|134024345|gb|AAI35351.1| hnrpa2b1 protein [Xenopus (Silurana) tropicalis]
Length = 349
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S +EVD + PH + + E KP A+ TVKK+FVGG+K D EE LRE
Sbjct: 59 SMDEVDASMAARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLRE 118
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G IES+ ++T+K++G KRGF F+ F+D+D VDKI
Sbjct: 119 YFEEYGKIESIEIITDKQSGKKRGFGFVTFDDHDPVDKI 157
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + ED LR Y+ Q+G + ++ + + RGF F+ F+ D VD
Sbjct: 9 RKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVD 64
>gi|317453642|gb|ADV19029.1| AT02853p [Drosophila melanogaster]
Length = 372
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ +I P A ATVKK+FVG LKD +E +R+YF FG I +N+V +KETG KRGFAF+
Sbjct: 116 RQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFV 175
Query: 133 EFNDYDVVDKI 143
EF+DYD VDK+
Sbjct: 176 EFDDYDPVDKV 186
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 77 IGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
I +PE ++K+F+GGL + D +L+ +F ++G I V ++ + T RGF FI ++
Sbjct: 31 ITEPEH---MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYS 87
Query: 136 DYDVVD 141
++D
Sbjct: 88 HSSMID 93
>gi|89269835|emb|CAJ82537.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Xenopus (Silurana)
tropicalis]
Length = 327
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S +EVD + PH + + E KP A+ TVKK+FVGG+K D EE LRE
Sbjct: 59 SMDEVDASMAARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLRE 118
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G IES+ ++T+K++G KRGF F+ F+D+D VDKI
Sbjct: 119 YFEEYGKIESIEIITDKQSGKKRGFGFVTFDDHDPVDKI 157
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + ED LR Y+ Q+G + ++ + + RGF F+ F+ D VD
Sbjct: 9 RKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVD 64
>gi|329112537|ref|NP_001016926.2| heterogeneous nuclear ribonucleoprotein A2/B1 isoform 2 [Xenopus
(Silurana) tropicalis]
Length = 328
Score = 87.8 bits (216), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S +EVD + PH + + E KP A+ TVKK+FVGG+K D EE LRE
Sbjct: 59 SMDEVDASMAARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLRE 118
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G IES+ ++T+K++G KRGF F+ F+D+D VDKI
Sbjct: 119 YFEEYGKIESIEIITDKQSGKKRGFGFVTFDDHDPVDKI 157
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + ED LR Y+ Q+G + ++ + + RGF F+ F+ D VD
Sbjct: 9 RKLFIGGLSFETTEDSLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMDEVD 64
>gi|317183317|gb|ADV15462.1| LD46071p [Drosophila melanogaster]
Length = 396
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 64/95 (67%), Gaps = 4/95 (4%)
Query: 53 MEEAQSE--EEVDMEIPGPPH-MDKLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQ 108
++EAQ ++D + P + + +I P A ATVKK+FVG LKD +E +R+YF
Sbjct: 116 IDEAQKSRPHKIDGRVVEPKRAVPRQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQH 175
Query: 109 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
FG I +N+V +KETG KRGFAF+EF+DYD VDK+
Sbjct: 176 FGNIVDINIVIDKETGKKRGFAFVEFDDYDPVDKV 210
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 77 IGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
I +PE ++K+F+GGL + D +L+ +F ++G I V ++ + T RGF FI ++
Sbjct: 55 ITEPEH---MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYS 111
Query: 136 DYDVVD 141
++D
Sbjct: 112 HSSMID 117
>gi|76780030|gb|AAI06633.1| MGC52881 protein [Xenopus laevis]
Length = 346
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 61/96 (63%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + E KP A+ TVKK+FVGG+K D EE LREYF
Sbjct: 62 EVDAAMSARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFE 121
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IES ++T+K++G KRGF F+ FND+D VDKI
Sbjct: 122 EYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKI 157
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR ++ Q+G + ++ + + RGF F+ F+ + VD
Sbjct: 9 RKLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVD 64
>gi|195113003|ref|XP_002001061.1| GI10577 [Drosophila mojavensis]
gi|193917655|gb|EDW16522.1| GI10577 [Drosophila mojavensis]
Length = 359
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ +I P A ATVKK+FVG LKD +E LR+YF +G I +N+V +KETG KRGFAF+
Sbjct: 105 RQDIDSPNAGATVKKLFVGALKDDHDEQSLRDYFQHYGNIVDINIVMDKETGKKRGFAFV 164
Query: 133 EFNDYDVVDKI 143
EF+DYD VDK+
Sbjct: 165 EFDDYDPVDKV 175
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 73 DKLEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAF 131
D I +PE ++K+F+GGL + DD L+ +F ++G I V ++ + T RGF F
Sbjct: 16 DDDSISEPEH---MRKLFIGGLDYRTTDDNLKAHFEKWGQIVDVVVMKDPRTKRSRGFGF 72
Query: 132 IEFNDYDVVD 141
I ++ +VD
Sbjct: 73 ITYSHSSMVD 82
>gi|148233568|ref|NP_001079471.1| heterogeneous nuclear ribonucleoprotein A2 homolog 2 [Xenopus
laevis]
gi|1710624|sp|P51990.1|RO22_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A2 homolog 2;
AltName: Full=hnRNP A2(B)
gi|214743|gb|AAB59951.1| ribonucleoprotein [Xenopus laevis]
gi|27694622|gb|AAH43750.1| MGC52881 protein [Xenopus laevis]
Length = 358
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 61/96 (63%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + E KP A+ TVKK+FVGG+K D EE LREYF
Sbjct: 62 EVDAAMSARPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFE 121
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IES ++T+K++G KRGF F+ FND+D VDKI
Sbjct: 122 EYGKIESTEIITDKQSGKKRGFGFVTFNDHDPVDKI 157
Score = 35.8 bits (81), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR ++ Q+G + ++ + + RGF F+ F+ + VD
Sbjct: 9 RKLFIGGLSFETTEESLRNFYEQWGQLTDCVVMRDPASKRSRGFGFVTFSCMNEVD 64
>gi|47550715|ref|NP_999871.1| heterogeneous nuclear ribonucleoprotein A0b [Danio rerio]
gi|42542945|gb|AAH66434.1| Heterogeneous nuclear ribonucleoprotein A0 [Danio rerio]
Length = 314
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/124 (42%), Positives = 69/124 (55%), Gaps = 14/124 (11%)
Query: 58 SEEEVDMEIPGPPHM------------DKLEIGKPEANATVKKMFVGGLKDQ-EEDDLRE 104
+ EE D + PH+ + + G+PEA A VKK+FVGGLKD EE DL E
Sbjct: 58 TSEEADAAMAARPHVVDGKNVEVKRAVAREDAGRPEALAKVKKIFVGGLKDDIEEKDLTE 117
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCK 163
+FSQFG IE ++T+K+TG KRGF F+ F D D DK F N + V V K + K
Sbjct: 118 FFSQFGMIEKSEVITDKDTGKKRGFGFVHFEDNDSADKAVVLKFHMINGHKVEVKKALTK 177
Query: 164 YNIE 167
I+
Sbjct: 178 QEIQ 181
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 88 KMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
K+FVGGL Q +D LR YF QFG + +V N + R F F+ ++ + D
Sbjct: 9 KLFVGGLNVQTTNDGLRSYFEQFGNLTDCVVVQNDQLQRSRCFGFVTYSTSEEAD 63
>gi|24650833|ref|NP_733250.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform E
[Drosophila melanogaster]
gi|157653|gb|AAA28623.1| nuclear ribonucleoprotein [Drosophila melanogaster]
gi|23172510|gb|AAN14141.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform E
[Drosophila melanogaster]
gi|259089588|gb|ACV91650.1| RE34829p [Drosophila melanogaster]
Length = 360
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ +I P A ATVKK+FVG LKD +E +R+YF FG I +N+V +KETG KRGFAF+
Sbjct: 104 RQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFV 163
Query: 133 EFNDYDVVDKI 143
EF+DYD VDK+
Sbjct: 164 EFDDYDPVDKV 174
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 15/83 (18%)
Query: 60 EEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMV 118
EE D I P HM +K+F+GGL + D +L+ +F ++G I V ++
Sbjct: 13 EEQDDSITEPEHM--------------RKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVM 58
Query: 119 TNKETGAKRGFAFIEFNDYDVVD 141
+ T RGF FI ++ ++D
Sbjct: 59 KDPRTKRSRGFGFITYSHSSMID 81
>gi|24650831|ref|NP_733249.1| heterogeneous nuclear ribonucleoprotein at 98DE, isoform A
[Drosophila melanogaster]
gi|157652|gb|AAA28622.1| nuclear ribonucleoprotein [Drosophila melanogaster]
gi|23172509|gb|AAF56800.2| heterogeneous nuclear ribonucleoprotein at 98DE, isoform A
[Drosophila melanogaster]
Length = 364
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ +I P A ATVKK+FVG LKD +E +R+YF FG I +N+V +KETG KRGFAF+
Sbjct: 108 RQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQHFGNIVDINIVIDKETGKKRGFAFV 167
Query: 133 EFNDYDVVDKI 143
EF+DYD VDK+
Sbjct: 168 EFDDYDPVDKV 178
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 77 IGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
I +PE ++K+F+GGL + D +L+ +F ++G I V ++ + T RGF FI ++
Sbjct: 23 ITEPEH---MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYS 79
Query: 136 DYDVVD 141
++D
Sbjct: 80 HSSMID 85
>gi|170030552|ref|XP_001843152.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167867828|gb|EDS31211.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 371
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 56/71 (78%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ +I +PEA A+VKK+FVGGL+D +E+ LR+YF +FG + S +VT KE+G KRGF F+
Sbjct: 102 RQDINRPEAGASVKKLFVGGLRDDFDEEHLRDYFGKFGNVISACIVTEKESGKKRGFGFV 161
Query: 133 EFNDYDVVDKI 143
EF+DYD VDKI
Sbjct: 162 EFDDYDPVDKI 172
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 43/70 (61%), Gaps = 4/70 (5%)
Query: 76 EIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
EI +PE ++K+F+GGL + D+ L+ YF ++G + V ++ + +T RGF FI +
Sbjct: 16 EIREPEH---LRKLFIGGLDYRTTDETLKAYFEKWGKVVDVVVMKDPKTKRSRGFGFITY 72
Query: 135 NDYDVVDKIR 144
+ +VD+ +
Sbjct: 73 SKPYMVDEAQ 82
>gi|312379326|gb|EFR25637.1| hypothetical protein AND_08860 [Anopheles darlingi]
Length = 357
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
Query: 55 EAQSEEEVDMEIPGPPH-MDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTI 112
+A ++D + P + + +I +PEA ++VKK+FVGGL+D +E+ LREYFS++G +
Sbjct: 87 QANRPHKIDGRVVEPKRAVPRQDINRPEAGSSVKKLFVGGLRDDFDEEHLREYFSKYGNV 146
Query: 113 ESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
S +VT+K+ G KRGF F+EF+DYD VDKI
Sbjct: 147 ISACIVTDKDNGKKRGFGFVEFDDYDPVDKI 177
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 73 DKLEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAF 131
D EI +PE ++K+F+GGL + DD L+ YF ++G + V ++ + +T RGF F
Sbjct: 18 DDDEIREPEH---LRKLFIGGLDYRTTDDTLKAYFEKWGKVVDVVVMKDPKTKRSRGFGF 74
Query: 132 IEFNDYDVVD 141
I ++ ++D
Sbjct: 75 ITYSKSYMID 84
>gi|347967733|ref|XP_563821.4| AGAP002374-PA [Anopheles gambiae str. PEST]
gi|333468325|gb|EAL40938.4| AGAP002374-PA [Anopheles gambiae str. PEST]
Length = 362
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 65/91 (71%), Gaps = 2/91 (2%)
Query: 55 EAQSEEEVDMEIPGPPH-MDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTI 112
+A ++D + P + + +I +PEA ++VKK+FVGGL+D +E+ LREYFS++G +
Sbjct: 87 QASRPHKIDGRVVEPKRAVPRQDINRPEAGSSVKKLFVGGLRDDFDEEHLREYFSKYGNV 146
Query: 113 ESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
S +VT+K+ G KRGF F+EF+DYD VDKI
Sbjct: 147 ISACIVTDKDNGKKRGFGFVEFDDYDPVDKI 177
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 73 DKLEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAF 131
D EI +PE ++K+F+GGL + DD L+ YF ++G + V ++ + +T RGF F
Sbjct: 18 DDDEIREPEH---LRKLFIGGLDYRTTDDTLKAYFEKWGKVVDVVVMKDPKTKRSRGFGF 74
Query: 132 IEFNDYDVVD 141
I ++ ++D
Sbjct: 75 ITYSKSYMID 84
>gi|195353064|ref|XP_002043030.1| GM16385 [Drosophila sechellia]
gi|194127095|gb|EDW49138.1| GM16385 [Drosophila sechellia]
Length = 363
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ +I P A ATVKK+FVG LKD +E +R+YF FG I +N+V +KETG KRGFAF+
Sbjct: 107 RQDIDSPNAGATVKKLFVGALKDDHDEQSIRDYFQNFGNIVDINIVIDKETGKKRGFAFV 166
Query: 133 EFNDYDVVDKI 143
EF+DYD VDK+
Sbjct: 167 EFDDYDPVDKV 177
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 77 IGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
I +PE ++K+F+GGL + D +L+ +F ++G I V ++ + T RGF FI ++
Sbjct: 22 ITEPEH---MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYS 78
Query: 136 DYDVVD 141
++D
Sbjct: 79 HSSMID 84
>gi|443705196|gb|ELU01851.1| hypothetical protein CAPTEDRAFT_169740 [Capitella teleta]
Length = 186
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 66/100 (66%), Gaps = 13/100 (13%)
Query: 57 QSEEEVDMEIPGPPH-MDKLEI-----------GKPEANATVKKMFVGGLK-DQEEDDLR 103
++ E VD PH +DK ++ G+PEA+ ++KK+FVGG+K D E LR
Sbjct: 18 KTAESVDEAQKARPHTIDKRQVEPKRAVPREDSGRPEAHMSLKKIFVGGIKEDTTEAHLR 77
Query: 104 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
EYFS++G IES++++T+KET RGF FI F+DYD VDKI
Sbjct: 78 EYFSEYGPIESIDIITDKETKRSRGFGFITFDDYDPVDKI 117
>gi|157126218|ref|XP_001660854.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108873325|gb|EAT37550.1| AAEL010467-PB [Aedes aegypti]
Length = 348
Score = 87.0 bits (214), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 68/95 (71%), Gaps = 4/95 (4%)
Query: 53 MEEAQSE--EEVDMEIPGPPH-MDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQ 108
++EAQ++ ++D + P + + +I +PEA A+VKK+FVGGL+D +E+ LR+YF
Sbjct: 66 VDEAQNKRPHKIDGRVVEPKRAVPRQDINRPEAGASVKKLFVGGLRDDFDEEHLRDYFGA 125
Query: 109 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
FG + S +VT+KE G KRGF F+EF+DYD VDKI
Sbjct: 126 FGNVISACIVTDKENGKKRGFGFVEFDDYDPVDKI 160
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 76 EIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
EI +PE ++K+F+GGL + D+ L+ YF ++G + V ++ + +T RGF FI +
Sbjct: 4 EIREPEH---LRKLFIGGLDYRTTDETLKAYFEKWGKVVDVVVMKDPKTKRSRGFGFITY 60
Query: 135 NDYDVVD 141
+ +VD
Sbjct: 61 SKPYMVD 67
>gi|194745069|ref|XP_001955015.1| GF18563 [Drosophila ananassae]
gi|190628052|gb|EDV43576.1| GF18563 [Drosophila ananassae]
Length = 474
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/90 (53%), Positives = 63/90 (70%), Gaps = 6/90 (6%)
Query: 81 EANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
E N +VKK+FVGGLKD +E+ LREYF QFG + SV ++T+K TG +RGFAFIEF+DYD
Sbjct: 121 ETNISVKKLFVGGLKDNHDEECLREYFMQFGNVVSVKLLTDKTTGKRRGFAFIEFDDYDA 180
Query: 140 VDK--IRGFAFIEFNDYDVVDKIVCKYNIE 167
VDK ++ I++ DV I YN+E
Sbjct: 181 VDKAILQKQHSIKYVHVDVKKSI---YNLE 207
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 86 VKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIR 144
++K+F+GGL E+ L+ ++ Q+G + V ++ + T RGF FI + +VDK +
Sbjct: 35 LRKLFIGGLAPYTTEEGLKVFYGQWGKVVDVVVMRDATTKRSRGFGFITYTKSLMVDKAQ 94
>gi|157126220|ref|XP_001660855.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108873326|gb|EAT37551.1| AAEL010467-PA [Aedes aegypti]
Length = 354
Score = 87.0 bits (214), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 46/95 (48%), Positives = 68/95 (71%), Gaps = 4/95 (4%)
Query: 53 MEEAQSE--EEVDMEIPGPPH-MDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQ 108
++EAQ++ ++D + P + + +I +PEA A+VKK+FVGGL+D +E+ LR+YF
Sbjct: 66 VDEAQNKRPHKIDGRVVEPKRAVPRQDINRPEAGASVKKLFVGGLRDDFDEEHLRDYFGA 125
Query: 109 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
FG + S +VT+KE G KRGF F+EF+DYD VDKI
Sbjct: 126 FGNVISACIVTDKENGKKRGFGFVEFDDYDPVDKI 160
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 41/67 (61%), Gaps = 4/67 (5%)
Query: 76 EIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
EI +PE ++K+F+GGL + D+ L+ YF ++G + V ++ + +T RGF FI +
Sbjct: 4 EIREPEH---LRKLFIGGLDYRTTDETLKAYFEKWGKVVDVVVMKDPKTKRSRGFGFITY 60
Query: 135 NDYDVVD 141
+ +VD
Sbjct: 61 SKPYMVD 67
>gi|209155482|gb|ACI33973.1| Heterogeneous nuclear ribonucleoprotein A0 [Salmo salar]
gi|223647890|gb|ACN10703.1| Heterogeneous nuclear ribonucleoprotein A0 [Salmo salar]
Length = 279
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 70/124 (56%), Gaps = 14/124 (11%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
+ +E D + PH + + + GKPEA A VKK+F+GGLK D E++ L E
Sbjct: 56 TADEADAAMSARPHALDGNNVELKRAVAREDAGKPEALAKVKKIFIGGLKEDIEDEHLSE 115
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCK 163
YFSQFGTIE ++++ +TG KRGF F+ F DYD DK F N + V V K + K
Sbjct: 116 YFSQFGTIEKAEVISDNQTGKKRGFGFVYFEDYDSADKAVVLKFHHINGHKVEVKKALTK 175
Query: 164 YNIE 167
++
Sbjct: 176 QEMQ 179
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 88 KMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
K+F+GGL D LR++F Q+G + +V N++ R F F+ + D D
Sbjct: 7 KLFIGGLNVHTTDGGLRKHFEQYGQLTDCVVVQNQQLQRSRCFGFVTYATADEAD 61
>gi|195450939|ref|XP_002072698.1| GK13742 [Drosophila willistoni]
gi|194168783|gb|EDW83684.1| GK13742 [Drosophila willistoni]
Length = 506
Score = 86.7 bits (213), Expect = 3e-15, Method: Composition-based stats.
Identities = 49/108 (45%), Positives = 65/108 (60%), Gaps = 12/108 (11%)
Query: 41 VVTTRPTINNKAMEEAQ-----SEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK 95
+ T+ T+ +KA E E +P P + E N +VKK+FVGGLK
Sbjct: 85 ITYTKSTMVDKAQENRPHVIDGKTVEAKRALPRPERESR------ETNISVKKLFVGGLK 138
Query: 96 D-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
D +E+ LREYF QFG + SV ++T+K TG +RGFAFIEF+DYD VDK
Sbjct: 139 DNHDEECLREYFVQFGHVVSVKLLTDKTTGKRRGFAFIEFDDYDAVDK 186
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 4/90 (4%)
Query: 54 EEAQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTI 112
+E +EE E+ P + +I + E ++K+F+GGL E+ L+ ++ Q+G +
Sbjct: 9 DEDNAEEPPSPEVIEVPDREDDDICELEH---LRKLFIGGLAPYTTEEGLKVFYGQWGKV 65
Query: 113 ESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
V ++ + T RGF FI + +VDK
Sbjct: 66 VDVVVMRDATTKRSRGFGFITYTKSTMVDK 95
>gi|194906902|ref|XP_001981451.1| GG11603 [Drosophila erecta]
gi|190656089|gb|EDV53321.1| GG11603 [Drosophila erecta]
Length = 358
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ +I P A ATVKK+FVG LKD +E +R+YF FG I +N+V +KETG KRGFAF+
Sbjct: 105 RQDIDSPNAGATVKKLFVGALKDDHDEQCIRDYFQHFGNIVDINIVMDKETGKKRGFAFV 164
Query: 133 EFNDYDVVDKI 143
EF+DYD VDK+
Sbjct: 165 EFDDYDPVDKV 175
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
Query: 73 DKLEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAF 131
D I +PE ++K+F+GGL + D +L+ +F ++G I V ++ + T RGF F
Sbjct: 16 DDDSITEPEH---MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGF 72
Query: 132 IEFNDYDVVD 141
I ++ ++D
Sbjct: 73 ITYSHSSMID 82
>gi|47086749|ref|NP_997810.1| heterogeneous nuclear ribonucleoprotein A0 [Danio rerio]
gi|44890516|gb|AAH66672.1| Zgc:77366 [Danio rerio]
Length = 305
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 69/124 (55%), Gaps = 14/124 (11%)
Query: 58 SEEEVDMEIPGPPHM------------DKLEIGKPEANATVKKMFVGGLKDQ-EEDDLRE 104
S +E D + PH+ + + GKPEA A VKK+F+GGLKD EED LR+
Sbjct: 60 SPDEADSAMSARPHILDGNNVELKRAVAREDAGKPEALAKVKKIFIGGLKDDIEEDHLRD 119
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCK 163
FSQFG +E ++T+KETG KRGF F+ F D D DK F N + V V K + K
Sbjct: 120 CFSQFGAVEKAEVITDKETGKKRGFGFVYFEDNDSADKAVVLKFHMINGHKVEVKKALTK 179
Query: 164 YNIE 167
++
Sbjct: 180 QEMQ 183
Score = 42.0 bits (97), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 88 KMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
K+FVGGL Q DD LR +F Q+G + +V N++ R F F+ ++ D D
Sbjct: 11 KLFVGGLNVQTTDDGLRNHFEQYGKLTDCVVVQNQQLKRSRCFGFVTYSSPDEAD 65
>gi|195503537|ref|XP_002098694.1| GE23791 [Drosophila yakuba]
gi|194184795|gb|EDW98406.1| GE23791 [Drosophila yakuba]
Length = 356
Score = 86.7 bits (213), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 41/71 (57%), Positives = 53/71 (74%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
+ +I P A ATVKK+FVG LKD +E +R+YF FG I +N+V +KETG KRGFAF+
Sbjct: 104 RQDIDSPNAGATVKKLFVGALKDDHDEQCIRDYFQHFGNIVDINIVMDKETGKKRGFAFV 163
Query: 133 EFNDYDVVDKI 143
EF+DYD VDK+
Sbjct: 164 EFDDYDPVDKV 174
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 77 IGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
I +PE ++K+F+GGL + D +L+ +F ++G I V ++ + T RGF FI ++
Sbjct: 19 ITEPEH---MRKLFIGGLDYRTTDENLKAHFEKWGNIVDVVVMKDPRTKRSRGFGFITYS 75
Query: 136 DYDVVD 141
++D
Sbjct: 76 HSSMID 81
>gi|195349782|ref|XP_002041421.1| GM10160 [Drosophila sechellia]
gi|194123116|gb|EDW45159.1| GM10160 [Drosophila sechellia]
Length = 472
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 63/90 (70%), Gaps = 6/90 (6%)
Query: 81 EANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
E N +VKK+FVGGLKD +E+ LREYF QFG + SV ++T+K TG +RGFAF+EF+DYD
Sbjct: 117 ETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDA 176
Query: 140 VDK--IRGFAFIEFNDYDVVDKIVCKYNIE 167
VDK ++ I++ DV I YN+E
Sbjct: 177 VDKAILKKQHAIKYVHVDVKKSI---YNLE 203
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 86 VKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIR 144
++K+F+GGL E++L+ ++ Q+G + V ++ + T RGF FI + +VD+ +
Sbjct: 31 LRKLFIGGLAPYTTEENLKVFYGQWGRVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQ 90
>gi|327274637|ref|XP_003222083.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Anolis carolinensis]
Length = 349
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 65/99 (65%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 67 SMAEVDSAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 126
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YFS++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 127 YFSEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 165
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 17 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 72
>gi|195574232|ref|XP_002105093.1| GD18114 [Drosophila simulans]
gi|194201020|gb|EDX14596.1| GD18114 [Drosophila simulans]
Length = 472
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 63/90 (70%), Gaps = 6/90 (6%)
Query: 81 EANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
E N +VKK+FVGGLKD +E+ LREYF QFG + SV ++T+K TG +RGFAF+EF+DYD
Sbjct: 117 ETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDA 176
Query: 140 VDK--IRGFAFIEFNDYDVVDKIVCKYNIE 167
VDK ++ I++ DV I YN+E
Sbjct: 177 VDKAILKKQHAIKYVHVDVKKSI---YNLE 203
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 86 VKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIR 144
++K+F+GGL E++L+ ++ Q+G + V ++ + T RGF FI + +VD+ +
Sbjct: 31 LRKLFIGGLAPYTTEENLKVFYGQWGRVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQ 90
>gi|41053816|ref|NP_956789.1| heterogeneous nuclear ribonucleoprotein A1 [Danio rerio]
gi|33416839|gb|AAH55499.1| Zgc:66127 [Danio rerio]
Length = 388
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 62/96 (64%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + + KP A++TVKKMFVGG+K D +E+ LREYF
Sbjct: 68 EVDAAMDARPHKVDGRAVEPKRAVSREDSSKPGAHSTVKKMFVGGIKEDTDEEHLREYFG 127
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
QFG I+ VN++T K + +RGFAFI F+D+D VD+I
Sbjct: 128 QFGKIDEVNIMTEKNSDKRRGFAFITFDDHDAVDRI 163
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ ++
Sbjct: 8 PREPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVG 67
Query: 139 VVD 141
VD
Sbjct: 68 EVD 70
>gi|148227778|ref|NP_001080390.1| heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Xenopus
laevis]
gi|28302301|gb|AAH46692.1| Hnrpa2b1 protein [Xenopus laevis]
Length = 346
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 63/96 (65%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + E KP A+ TVKK+FVGG+K D EE LREYF
Sbjct: 62 EVDAAMATRPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFE 121
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G I+S+ ++T+K++G KRGFAF+ F+D+D VDKI
Sbjct: 122 EYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKI 157
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+GT+ ++ + + RGF F+ F+ + VD
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVD 64
>gi|1710623|sp|P51989.1|RO21_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A2 homolog 1;
AltName: Full=hnRNP A2(A)
gi|214741|gb|AAA49948.1| ribonucleoprotein [Xenopus laevis]
Length = 346
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 63/96 (65%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + E KP A+ TVKK+FVGG+K D EE LREYF
Sbjct: 62 EVDAAMATRPHTIDGRVVEPKRAVAREESAKPGAHVTVKKLFVGGIKEDTEEHHLREYFE 121
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G I+S+ ++T+K++G KRGFAF+ F+D+D VDKI
Sbjct: 122 EYGKIDSIEIITDKQSGKKRGFAFVTFDDHDPVDKI 157
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+GT+ ++ + + RGF F+ F+ + VD
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGTLTDCVVMRDPASKRSRGFGFVTFSCMNEVD 64
>gi|194907807|ref|XP_001981631.1| GG12167 [Drosophila erecta]
gi|190656269|gb|EDV53501.1| GG12167 [Drosophila erecta]
Length = 472
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 63/90 (70%), Gaps = 6/90 (6%)
Query: 81 EANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
E N +VKK+FVGGLKD +E+ LREYF QFG + SV ++T+K TG +RGFAF+EF+DYD
Sbjct: 117 ETNISVKKLFVGGLKDNHDEECLREYFLQFGRVVSVKLLTDKTTGKRRGFAFVEFDDYDA 176
Query: 140 VDK--IRGFAFIEFNDYDVVDKIVCKYNIE 167
VDK ++ I++ DV I YN+E
Sbjct: 177 VDKAILKKQHSIKYVHVDVKKSI---YNLE 203
Score = 40.0 bits (92), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 86 VKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIR 144
++K+F+GGL E++L+ ++ Q+G + V ++ + T RGF FI + +VDK +
Sbjct: 31 LRKLFIGGLAPYTTEENLKVFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDKAQ 90
>gi|75074832|sp|Q9TTV2.1|ROA2_SAGOE RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1; AltName: Full=Vitamin D response
element-binding protein 2; Short=VDRE-BP 2
gi|6273351|gb|AAF06330.1|AF192348_1 vitamin D response element binding protein [Saguinus oedipus]
Length = 341
Score = 85.9 bits (211), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 65/99 (65%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 59 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 118
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF+++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 119 YFAEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Score = 38.5 bits (88), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL Q E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 9 RKLFIGGLSFQTTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 64
>gi|133258|sp|P17130.1|ROA1_XENLA RecName: Full=Heterogeneous nuclear ribonucleoproteins A1 homolog;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand-binding protein;
AltName: Full=hnRNP core protein A1
gi|214239|gb|AAA49741.1| ribonucleoprotein A1a [Xenopus laevis]
Length = 365
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 63/99 (63%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S +EVD + PH + + + +P A+ TVKK+FVGG+K D EED LRE
Sbjct: 64 STDEVDAAMTARPHKVDGRVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEDHLRE 123
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF Q+G IE + ++T++ +G KRGFAF+ F D+D VDKI
Sbjct: 124 YFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKI 162
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P ++K+F+GGL + D+ LRE+F Q+GT+ ++ + + RGF F+ + D
Sbjct: 7 PNEPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTD 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|31455238|gb|AAH00506.3| HNRNPA2B1 protein [Homo sapiens]
Length = 249
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 59 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 118
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 119 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Score = 38.9 bits (89), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 64
>gi|417409751|gb|JAA51367.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 328
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 63/96 (65%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 89 EVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFE 148
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 149 EYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 184
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 36 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 91
>gi|417410136|gb|JAA51545.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 368
Score = 85.5 bits (210), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 63/96 (65%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 89 EVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFE 148
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 149 EYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 184
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 36 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 91
>gi|17738229|ref|NP_524520.1| ribonuclear protein at 97D, isoform B [Drosophila melanogaster]
gi|62472977|ref|NP_001014671.1| ribonuclear protein at 97D, isoform I [Drosophila melanogaster]
gi|62472987|ref|NP_001014672.1| ribonuclear protein at 97D, isoform H [Drosophila melanogaster]
gi|62472997|ref|NP_001014674.1| ribonuclear protein at 97D, isoform F [Drosophila melanogaster]
gi|400927|sp|Q02926.1|RB97D_DROME RecName: Full=Ribonucleoprotein RB97D
gi|158221|gb|AAA99873.1| ribonucleoprotein [Drosophila melanogaster]
gi|7301511|gb|AAF56633.1| ribonuclear protein at 97D, isoform B [Drosophila melanogaster]
gi|61679405|gb|AAX52999.1| ribonuclear protein at 97D, isoform F [Drosophila melanogaster]
gi|61679406|gb|AAX53000.1| ribonuclear protein at 97D, isoform H [Drosophila melanogaster]
gi|61679407|gb|AAX53001.1| ribonuclear protein at 97D, isoform I [Drosophila melanogaster]
Length = 471
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 63/90 (70%), Gaps = 6/90 (6%)
Query: 81 EANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
E N +VKK+FVGGLKD +E+ LREYF QFG + SV ++T+K TG +RGFAF+EF+DYD
Sbjct: 117 ETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDA 176
Query: 140 VDK--IRGFAFIEFNDYDVVDKIVCKYNIE 167
VDK ++ I++ DV I YN++
Sbjct: 177 VDKAILKKQHAIKYVHVDVKKSI---YNLD 203
Score = 39.3 bits (90), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 86 VKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIR 144
++K+F+GGL E++L+ ++ Q+G + V ++ + T RGF FI + +VD+ +
Sbjct: 31 LRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQ 90
>gi|148666221|gb|EDK98637.1| mCG119114, isoform CRA_a [Mus musculus]
Length = 357
Score = 85.5 bits (210), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 115 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 174
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 175 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 213
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 65 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 120
>gi|348564390|ref|XP_003467988.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Cavia porcellus]
Length = 383
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 101 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 160
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 161 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 199
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 51 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 106
>gi|154183823|gb|ABS70764.1| Hnrp1 [Haplochromis burtoni]
Length = 289
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S +EVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+
Sbjct: 64 SVQEVDAAMSARPHKVDGRVVEPKRAVSREDSNRPGAHITVKKIFVGGIKEDTEESHLRD 123
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF QFG IE ++++T++ TG KRGFAF+ F+D+D VD+I
Sbjct: 124 YFQQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRI 162
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P ++K+F+GGL + D+ LR +F Q+GT+ ++ + + RGF F+ ++
Sbjct: 7 PREPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVQ 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|214241|gb|AAA49742.1| ribonucleoprotein A1b [Xenopus laevis]
Length = 351
Score = 85.1 bits (209), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 63/99 (63%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S +EVD + PH + + + +P A+ TVKK+FVGG+K D EED LRE
Sbjct: 64 STDEVDAAMTARPHKVDGRVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEDHLRE 123
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF Q+G IE + ++T++ +G KRGFAF+ F D+D VDKI
Sbjct: 124 YFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKI 162
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P ++K+F+GGL + D+ LRE+F Q+GT+ ++ + + RGF F+ + D
Sbjct: 7 PNEPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTD 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|326921905|ref|XP_003207194.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Meleagris gallopavo]
Length = 362
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 80 SMAEVDAAMAARPHTIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 139
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 140 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 178
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 30 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 85
>gi|147900728|ref|NP_001081282.1| heterogeneous nuclear ribonucleoproteins A1 homolog [Xenopus
laevis]
gi|47938744|gb|AAH72090.1| LOC397751 protein [Xenopus laevis]
Length = 365
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 63/99 (63%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S +EVD + PH + + + +P A+ TVKK+FVGG+K D EED LRE
Sbjct: 64 STDEVDAAMTARPHKVDGRVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEDHLRE 123
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF Q+G IE + ++T++ +G KRGFAF+ F D+D VDKI
Sbjct: 124 YFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKI 162
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P ++K+F+GGL + D+ LRE+F Q+GT+ ++ + + RGF F+ + D
Sbjct: 7 PNEPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYLSTD 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|24650422|ref|NP_733172.1| ribonuclear protein at 97D, isoform A [Drosophila melanogaster]
gi|62472991|ref|NP_001014673.1| ribonuclear protein at 97D, isoform G [Drosophila melanogaster]
gi|62473028|ref|NP_001014677.1| ribonuclear protein at 97D, isoform C [Drosophila melanogaster]
gi|158222|gb|AAA99872.1| ribonucleoprotein [Drosophila melanogaster]
gi|23172392|gb|AAN14092.1| ribonuclear protein at 97D, isoform A [Drosophila melanogaster]
gi|61679403|gb|AAX52997.1| ribonuclear protein at 97D, isoform C [Drosophila melanogaster]
gi|61679404|gb|AAX52998.1| ribonuclear protein at 97D, isoform G [Drosophila melanogaster]
Length = 465
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 63/90 (70%), Gaps = 6/90 (6%)
Query: 81 EANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
E N +VKK+FVGGLKD +E+ LREYF QFG + SV ++T+K TG +RGFAF+EF+DYD
Sbjct: 117 ETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDA 176
Query: 140 VDK--IRGFAFIEFNDYDVVDKIVCKYNIE 167
VDK ++ I++ DV I YN++
Sbjct: 177 VDKAILKKQHAIKYVHVDVKKSI---YNLD 203
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 86 VKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIR 144
++K+F+GGL E++L+ ++ Q+G + V ++ + T RGF FI + +VD+ +
Sbjct: 31 LRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQ 90
>gi|355694911|gb|AER99826.1| heteroproteinous nuclear ribonucleoprotein A2/B1 [Mustela putorius
furo]
Length = 173
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 57 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 116
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 117 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 155
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 7 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 62
>gi|209733364|gb|ACI67551.1| Heterogeneous nuclear ribonucleoprotein A0 [Salmo salar]
Length = 261
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 76 EIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
+ GKPEA A VKK+F+GGLKD ED+ L EYFSQFG IE ++ KETG KRGF F+ F
Sbjct: 88 DAGKPEALAKVKKIFIGGLKDDIEDEHLNEYFSQFGEIEKAEVIAEKETGKKRGFGFVHF 147
Query: 135 NDYDVVDKIRGFAFIEFNDYDV 156
D D DK F N + V
Sbjct: 148 TDNDSADKAVVLKFHNINGHKV 169
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
K+FVGGL D ++D LR++F Q+G + +V NK+ R F F+ ++
Sbjct: 9 KLFVGGLNVDTDDDGLRKHFEQYGQLTDCVVVVNKQLQRSRCFGFVTYS 57
>gi|348521586|ref|XP_003448307.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Oreochromis niloticus]
Length = 332
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S +EVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+
Sbjct: 64 SVQEVDAAMSARPHKVDGRVVEPKRAVSREDSNRPGAHITVKKIFVGGIKEDTEESHLRD 123
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF QFG IE ++++T++ TG KRGFAF+ F+D+D VD+I
Sbjct: 124 YFQQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRI 162
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P ++K+F+GGL + D+ LR +F Q+GT+ ++ + + RGF F+ ++
Sbjct: 7 PREPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVQ 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|449268325|gb|EMC79194.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Columba
livia]
Length = 339
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 57 SMAEVDAAMAARPHTIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 116
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 117 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 155
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 7 RKLFIGGLSFETTEESLRSYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 62
>gi|392339470|ref|XP_003753820.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Rattus norvegicus]
Length = 341
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 65/99 (65%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD+ + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 59 SMAEVDVAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 118
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 119 YFEEYGKIDTIEIITDRQSGXKRGFGFVTFDDHDPVDKI 157
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 10 KLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 64
>gi|432865306|ref|XP_004070518.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Oryzias latipes]
Length = 329
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S +EVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+
Sbjct: 63 SVQEVDAAMSARPHKVDGRVVEPKRAVSREDSNRPGAHITVKKIFVGGIKEDTEESHLRD 122
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF QFG IE ++++T++ TG KRGFAF+ F+D+D VD+I
Sbjct: 123 YFQQFGKIEVIDIMTDRNTGKKRGFAFVTFDDHDSVDRI 161
Score = 39.7 bits (91), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P ++K+F+GGL + D+ LR +F Q+GT+ ++ + + RGF F+ ++
Sbjct: 6 PREPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVQ 65
Query: 139 VVD 141
VD
Sbjct: 66 EVD 68
>gi|62473005|ref|NP_001014675.1| ribonuclear protein at 97D, isoform E [Drosophila melanogaster]
gi|62473015|ref|NP_001014676.1| ribonuclear protein at 97D, isoform D [Drosophila melanogaster]
gi|25009807|gb|AAN71075.1| AT15526p [Drosophila melanogaster]
gi|61679408|gb|AAX53002.1| ribonuclear protein at 97D, isoform D [Drosophila melanogaster]
gi|61679409|gb|AAX53003.1| ribonuclear protein at 97D, isoform E [Drosophila melanogaster]
Length = 434
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 63/90 (70%), Gaps = 6/90 (6%)
Query: 81 EANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
E N +VKK+FVGGLKD +E+ LREYF QFG + SV ++T+K TG +RGFAF+EF+DYD
Sbjct: 117 ETNISVKKLFVGGLKDNHDEECLREYFLQFGNVVSVKLLTDKTTGKRRGFAFVEFDDYDA 176
Query: 140 VDK--IRGFAFIEFNDYDVVDKIVCKYNIE 167
VDK ++ I++ DV I YN++
Sbjct: 177 VDKAILKKQHAIKYVHVDVKKSI---YNLD 203
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 86 VKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIR 144
++K+F+GGL E++L+ ++ Q+G + V ++ + T RGF FI + +VD+ +
Sbjct: 31 LRKLFIGGLAPYTTEENLKLFYGQWGKVVDVVVMRDAATKRSRGFGFITYTKSLMVDRAQ 90
>gi|119614244|gb|EAW93838.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_d [Homo
sapiens]
gi|119614246|gb|EAW93840.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_d [Homo
sapiens]
gi|119614247|gb|EAW93841.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_d [Homo
sapiens]
Length = 301
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 19 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 78
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 79 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 117
>gi|323649982|gb|ADX97077.1| hnrpa01 protein [Perca flavescens]
Length = 124
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/122 (40%), Positives = 67/122 (54%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYF 106
EE D + PH + + + KPEA A VKK+FVGGLKD EE+ L +YF
Sbjct: 1 EEADAAMAARPHTVDGNSVEVKRAVAREDANKPEALAKVKKIFVGGLKDDIEEEHLSDYF 60
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQ+G IE +++ KETG KRGF F+ F D+D DK F N + V V K + K
Sbjct: 61 SQYGQIEKAEVISEKETGKKRGFGFVYFTDHDAADKAVVVKFHTVNGHKVEVKKALTKQE 120
Query: 166 IE 167
++
Sbjct: 121 MQ 122
>gi|440899276|gb|ELR50605.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Bos
grunniens mutus]
Length = 339
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 57 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 116
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 117 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 155
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 7 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 62
>gi|354472764|ref|XP_003498607.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Cricetulus griseus]
Length = 357
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 75 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 134
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 135 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 173
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 25 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 80
>gi|197101465|ref|NP_001127331.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Pongo abelii]
gi|75070806|sp|Q5RBU8.1|ROA2_PONAB RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|55728019|emb|CAH90762.1| hypothetical protein [Pongo abelii]
Length = 353
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 63/96 (65%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 74 EVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFE 133
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 134 EYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 76
>gi|14043072|ref|NP_112533.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform B1 [Homo
sapiens]
gi|388452958|ref|NP_001252700.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Macaca mulatta]
gi|73976084|ref|XP_532495.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Canis lupus familiaris]
gi|194209740|ref|XP_001498416.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Equus caballus]
gi|296209404|ref|XP_002751505.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Callithrix jacchus]
gi|301754131|ref|XP_002912905.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Ailuropoda melanoleuca]
gi|332242622|ref|XP_003270484.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Nomascus leucogenys]
gi|332864911|ref|XP_519003.3| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Pan troglodytes]
gi|335305558|ref|XP_003134901.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Sus scrofa]
gi|395830927|ref|XP_003788564.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Otolemur
garnettii]
gi|397472890|ref|XP_003807965.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Pan paniscus]
gi|402863877|ref|XP_003896220.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Papio anubis]
gi|403287971|ref|XP_003935192.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Saimiri boliviensis boliviensis]
gi|410952508|ref|XP_003982921.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Felis catus]
gi|426227786|ref|XP_004007996.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Ovis
aries]
gi|426355699|ref|XP_004045247.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Gorilla gorilla gorilla]
gi|133257|sp|P22626.2|ROA2_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|337453|gb|AAA60271.1| hnRNP B1 protein [Homo sapiens]
gi|565643|dbj|BAA06031.1| hnRNP B1 protein [Homo sapiens]
gi|119614243|gb|EAW93837.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_c [Homo
sapiens]
gi|119614245|gb|EAW93839.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_c [Homo
sapiens]
gi|387542844|gb|AFJ72049.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform B1 [Macaca
mulatta]
gi|410225454|gb|JAA09946.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343563|gb|JAA40595.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
Length = 353
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 63/96 (65%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 74 EVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFE 133
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 134 EYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 76
>gi|158259881|dbj|BAF82118.1| unnamed protein product [Homo sapiens]
Length = 353
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 63/96 (65%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 74 EVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFE 133
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 134 EYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 76
>gi|124028629|sp|O88569.2|ROA2_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|23266713|gb|AAN16352.1|AF452567_1 heterogeneous nuclear ribonucleoprotein A2/B1/B0 [Mus musculus]
Length = 353
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 63/96 (65%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 74 EVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFE 133
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 134 EYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 76
>gi|291394569|ref|XP_002713772.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2/B1
[Oryctolagus cuniculus]
gi|291397610|ref|XP_002715276.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2/B1
[Oryctolagus cuniculus]
Length = 352
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 63/96 (65%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 74 EVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFE 133
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 134 EYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 76
>gi|4504447|ref|NP_002128.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform A2 [Homo
sapiens]
gi|114051756|ref|NP_001039440.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Bos taurus]
gi|73976082|ref|XP_863847.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 3
[Canis lupus familiaris]
gi|332242620|ref|XP_003270483.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Nomascus leucogenys]
gi|332864909|ref|XP_003318407.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Pan troglodytes]
gi|338724111|ref|XP_003364873.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Equus caballus]
gi|350595419|ref|XP_003484106.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Sus scrofa]
gi|390466619|ref|XP_003733620.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2
[Callithrix jacchus]
gi|397472888|ref|XP_003807964.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Pan paniscus]
gi|402863875|ref|XP_003896219.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Papio anubis]
gi|403287969|ref|XP_003935191.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Saimiri boliviensis boliviensis]
gi|410952506|ref|XP_003982920.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Felis catus]
gi|426355697|ref|XP_004045246.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1
[Gorilla gorilla gorilla]
gi|122145945|sp|Q2HJ60.1|ROA2_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|337449|gb|AAA36574.1| hnRNP A2 protein [Homo sapiens]
gi|500638|gb|AAB60650.1| hnRNP protein A2 [Homo sapiens]
gi|565644|dbj|BAA06032.1| hnRNP A2 protein [Homo sapiens]
gi|87578315|gb|AAI13299.1| Heterogeneous nuclear ribonucleoprotein A2/B1 [Bos taurus]
gi|119614241|gb|EAW93835.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_b [Homo
sapiens]
gi|119614242|gb|EAW93836.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_b [Homo
sapiens]
gi|149033380|gb|EDL88181.1| rCG52521, isoform CRA_a [Rattus norvegicus]
gi|149033381|gb|EDL88182.1| rCG52521, isoform CRA_a [Rattus norvegicus]
gi|296488431|tpg|DAA30544.1| TPA: heterogeneous nuclear ribonucleoproteins A2/B1 [Bos taurus]
gi|387542842|gb|AFJ72048.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform A2 [Macaca
mulatta]
gi|410225452|gb|JAA09945.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343561|gb|JAA40594.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343565|gb|JAA40596.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343567|gb|JAA40597.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|410343569|gb|JAA40598.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Pan troglodytes]
gi|456753293|gb|JAA74140.1| heterogeneous nuclear ribonucleoprotein A2/B1 [Sus scrofa]
Length = 341
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 59 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 118
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 119 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 64
>gi|109134362|ref|NP_058086.2| heterogeneous nuclear ribonucleoproteins A2/B1 isoform 1 [Mus
musculus]
gi|309267107|ref|XP_001473875.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 1 [Mus musculus]
gi|21071091|gb|AAK98601.2| heterogeneous nuclear ribonucleoprotein A2/B1 [Mus musculus]
gi|148666222|gb|EDK98638.1| mCG119114, isoform CRA_b [Mus musculus]
gi|148666223|gb|EDK98639.1| mCG119114, isoform CRA_b [Mus musculus]
Length = 341
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 59 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 118
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 119 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 64
>gi|32880197|ref|NP_872591.1| heterogeneous nuclear ribonucleoproteins A2/B1 isoform 2 [Mus
musculus]
gi|26354140|dbj|BAC40700.1| unnamed protein product [Mus musculus]
gi|223461557|gb|AAI41254.1| Hnrnpa2b1 protein [Mus musculus]
Length = 301
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 59 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 118
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 119 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 64
>gi|410058693|ref|XP_003951016.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Pan
troglodytes]
gi|119614240|gb|EAW93834.1| heterogeneous nuclear ribonucleoprotein A2/B1, isoform CRA_a [Homo
sapiens]
Length = 301
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 59 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 118
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 119 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 64
>gi|334349111|ref|XP_001368260.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Monodelphis domestica]
Length = 341
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 59 SMAEVDAAMSARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 118
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 119 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 64
>gi|149634029|ref|XP_001510026.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 1 [Ornithorhynchus anatinus]
gi|345323587|ref|XP_003430725.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 2 [Ornithorhynchus anatinus]
Length = 344
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 59 SMAEVDAAMSARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 118
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 119 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 64
>gi|90083957|dbj|BAE90929.1| unnamed protein product [Macaca fascicularis]
Length = 317
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 63/96 (65%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 74 EVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFE 133
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 134 EYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 76
>gi|351704285|gb|EHB07204.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial
[Heterocephalus glaber]
gi|355560744|gb|EHH17430.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Macaca
mulatta]
gi|355747762|gb|EHH52259.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Macaca
fascicularis]
Length = 352
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 70 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 129
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 130 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 168
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 20 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 75
>gi|3329498|gb|AAC26867.1| heterogenous nuclear ribonucleoprotein A2/B1 [Mus musculus]
Length = 341
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 59 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 118
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 119 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 64
>gi|344238619|gb|EGV94722.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Cricetulus griseus]
Length = 282
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 63/96 (65%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 3 EVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFE 62
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 63 EYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 98
>gi|157059859|dbj|BAF79675.1| heterogeneous nuclear ribonucleoprotein A2 [Rattus norvegicus]
Length = 341
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 59 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 118
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 119 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 64
>gi|345323589|ref|XP_003430726.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
isoform 3 [Ornithorhynchus anatinus]
Length = 302
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 59 SMAEVDAAMSARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 118
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 119 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Score = 37.7 bits (86), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 64
>gi|157059863|dbj|BAF79677.1| heterogeneous nuclear ribonucleoprotein B0a [Rattus norvegicus]
Length = 301
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 59 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 118
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 119 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 64
>gi|344270293|ref|XP_003406980.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Loxodonta africana]
Length = 365
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 83 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 142
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 143 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 181
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 33 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 88
>gi|343961425|dbj|BAK62302.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Pan troglodytes]
Length = 301
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 59 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 118
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 119 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 64
>gi|74209393|dbj|BAE23274.1| unnamed protein product [Mus musculus]
Length = 301
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 59 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 118
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 119 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Score = 37.4 bits (85), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 64
>gi|444523821|gb|ELV13633.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Tupaia chinensis]
Length = 304
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 87 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 146
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 147 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 185
Score = 39.7 bits (91), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 37 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 92
>gi|157059865|dbj|BAF79678.1| heterogeneous nuclear ribonucleoprotein B0b [Rattus norvegicus]
Length = 313
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 63/96 (65%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 74 EVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFE 133
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 134 EYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 76
>gi|157265559|ref|NP_001098083.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Rattus norvegicus]
gi|224493240|sp|A7VJC2.1|ROA2_RAT RecName: Full=Heterogeneous nuclear ribonucleoproteins A2/B1;
Short=hnRNP A2/B1
gi|157059861|dbj|BAF79676.1| heterogeneous nuclear ribonucleoprotein B1 [Rattus norvegicus]
Length = 353
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 63/96 (65%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 74 EVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFE 133
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 134 EYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 21 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 76
>gi|296196619|ref|XP_002745917.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Callithrix jacchus]
Length = 341
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 59 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 118
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 119 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 64
>gi|281349549|gb|EFB25133.1| hypothetical protein PANDA_000670 [Ailuropoda melanoleuca]
Length = 323
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 59 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 118
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 119 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 64
>gi|71896753|ref|NP_001026156.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Gallus gallus]
gi|53127438|emb|CAG31102.1| hypothetical protein RCJMB04_2g17 [Gallus gallus]
Length = 349
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 67 SMAEVDAAMAARPHTIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 126
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 127 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 165
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 17 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 72
>gi|395540406|ref|XP_003772146.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1
[Sarcophilus harrisii]
Length = 385
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 84 SMAEVDAAMSARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 143
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 144 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 182
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 78 GKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 136
G+ +K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+
Sbjct: 25 GQRREKEQFRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSS 84
Query: 137 YDVVD 141
VD
Sbjct: 85 MAEVD 89
>gi|449492608|ref|XP_002192177.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1
[Taeniopygia guttata]
Length = 309
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 67 SMAEVDAAMAARPHTIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 126
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 127 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 165
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 17 RKLFIGGLSFETTEESLRSYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 72
>gi|219519440|gb|AAI45589.1| Heterogeneous nuclear ribonucleoprotein A2/B1 [Mus musculus]
Length = 341
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 59 SMAEVDGAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 118
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 119 YFEEYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 157
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 64
>gi|112180524|gb|AAH50513.2| Hnrpa0l protein [Danio rerio]
Length = 302
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 60/98 (61%), Gaps = 13/98 (13%)
Query: 58 SEEEVDMEIPGPPHM------------DKLEIGKPEANATVKKMFVGGLKDQEEDD-LRE 104
S EE D + PH+ + + GKPE A VKK+FVGGLKD ED+ L++
Sbjct: 56 STEEADAAMSARPHIVDGNNVDLKRAVAREDAGKPEMLAKVKKIFVGGLKDDIEDEHLQD 115
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
YFSQFG IE ++T+K+TG KRGF F+ F+D D DK
Sbjct: 116 YFSQFGPIEKAQVITDKDTGKKRGFGFVYFDDNDSADK 153
Score = 35.4 bits (80), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 88 KMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
K+FVGGL Q D+ LR +F Q+G + +V N+ R F F+ ++ + D
Sbjct: 7 KLFVGGLNVQTTDEGLRAHFEQYGQLTDCVVVMNQPLQRSRCFGFVTYSSTEEAD 61
>gi|47214179|emb|CAF96980.1| unnamed protein product [Tetraodon nigroviridis]
Length = 487
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 68/122 (55%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYF 106
EE D + PH + + + GKPEA A VKK+FVGGLKD EE+ L E+F
Sbjct: 57 EEADSAMAARPHTVDGNPVEVKRAVAREDAGKPEALAKVKKIFVGGLKDDTEENHLTEHF 116
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFG IE ++++KETG KRGF F+ F D D DK F N + V V K + K
Sbjct: 117 SQFGEIEKAEVISDKETGKKRGFGFVYFVDQDSADKSVVIKFHTINGHKVEVKKALTKQE 176
Query: 166 IE 167
++
Sbjct: 177 LQ 178
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 52/96 (54%), Gaps = 13/96 (13%)
Query: 60 EEVDMEIPGPPHM------------DKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYF 106
EE D + PH+ + + PE A VKK+FVGG++D E + L +YF
Sbjct: 310 EEADSAMAASPHVVDGHNVELKRAVARQDADNPEVLANVKKIFVGGVQDHVEAEHLTDYF 369
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
SQFG +E ++++K TG KRGF F+ F D D K
Sbjct: 370 SQFGAVEKAEIISDKLTGKKRGFGFVFFVDTDSATK 405
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
K+FVGGL D ++D LR++F QFGT+ +V NK+ R F F+ ++
Sbjct: 6 KLFVGGLNVDTDDDGLRKHFEQFGTLTDCVVVVNKQVQRSRCFGFVTYS 54
>gi|392332853|ref|XP_003752716.1| PREDICTED: regulator of G-protein signaling protein-like [Rattus
norvegicus]
Length = 1173
Score = 84.0 bits (206), Expect = 2e-14, Method: Composition-based stats.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 781 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 840
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 841 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 877
Score = 48.1 bits (113), Expect = 0.001, Method: Composition-based stats.
Identities = 23/69 (33%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
K+E P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+
Sbjct: 716 KMEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFV 775
Query: 133 EFNDYDVVD 141
++ + VD
Sbjct: 776 TYSCVEEVD 784
>gi|209737592|gb|ACI69665.1| Heterogeneous nuclear ribonucleoprotein A0 [Salmo salar]
Length = 167
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 44/80 (55%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Query: 76 EIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
+ GKPEA A VKK+F+GGLKD ED+ L EYFSQFG IE ++ KETG KRGF F+ F
Sbjct: 88 DAGKPEALAKVKKIFIGGLKDDIEDEHLNEYFSQFGEIEKAEVIAEKETGKKRGFGFVHF 147
Query: 135 NDYDVVDKIRGFAFIEFNDY 154
D D DK F N Y
Sbjct: 148 TDNDSADKAVVLKFHNINGY 167
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
K+FVGGL D ++D LR++F Q+G + +V NK+ R F F+ ++
Sbjct: 9 KLFVGGLNVDTDDDGLRKHFEQYGQLTDCVVVVNKQLQRSRCFGFVTYS 57
>gi|195165900|ref|XP_002023776.1| GL27263 [Drosophila persimilis]
gi|194105936|gb|EDW27979.1| GL27263 [Drosophila persimilis]
Length = 226
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 40/61 (65%), Positives = 49/61 (80%), Gaps = 1/61 (1%)
Query: 81 EANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
E N +VKK+FVGGLKD +ED LREYF QFG + SV ++T+K TG +RGFAFIEF+DYD
Sbjct: 120 ETNISVKKLFVGGLKDNHDEDCLREYFVQFGRVVSVKLLTDKTTGKRRGFAFIEFDDYDA 179
Query: 140 V 140
V
Sbjct: 180 V 180
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 69 PPHMDKLEIGKPEAN-----ATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKE 122
PP + +EI E + ++K+F+GGL E+ L+ ++ Q+G + V ++ +
Sbjct: 12 PPSTETIEIPDREDDDICELEHLRKLFIGGLAPYTTEEGLKVFYGQWGKVVDVVVMRDAA 71
Query: 123 TGAKRGFAFIEFNDYDVVDK 142
T RGF FI + +VDK
Sbjct: 72 TKRSRGFGFITYTKSAMVDK 91
>gi|390464603|ref|XP_003733247.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like, partial [Callithrix jacchus]
Length = 288
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPSAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|5733715|gb|AAD49731.1|AF169290_1 hnRNP A2/B1 protein [Sus scrofa]
Length = 84
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Query: 76 EIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
E GKP A+ TVKK+FVGG+K D EE LR+YF ++G I+++ ++T++++G KRGF F+ F
Sbjct: 15 ESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTF 74
Query: 135 NDYDVVDKI 143
+D+D VDKI
Sbjct: 75 DDHDPVDKI 83
>gi|37747847|gb|AAH59107.1| Hnrpa2b1 protein, partial [Mus musculus]
Length = 219
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/69 (53%), Positives = 55/69 (79%), Gaps = 1/69 (1%)
Query: 76 EIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
E GKP A+ TVKK+FVGG+K D EE LR+YF ++G I+++ ++T++++G KRGF F+ F
Sbjct: 7 ESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVTF 66
Query: 135 NDYDVVDKI 143
+D+D VDKI
Sbjct: 67 DDHDPVDKI 75
>gi|328709829|ref|XP_001950969.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 87F-like
[Acyrthosiphon pisum]
Length = 349
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 53/67 (79%)
Query: 76 EIGKPEANATVKKMFVGGLKDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
+I KP+ ATVKKMFV G+K+Q E+DL EYF +FG I +V +VT+K++G ++GF FIE++
Sbjct: 90 DIDKPDIAATVKKMFVSGIKEQSENDLLEYFGKFGNITNVTIVTDKDSGQRKGFGFIEYD 149
Query: 136 DYDVVDK 142
D D VDK
Sbjct: 150 DTDSVDK 156
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
+K+F+GGL D L+E+F Q+G I V ++ + +T RGF FI ++ +VD+
Sbjct: 10 RKLFIGGLNYTTTNDSLKEFFEQWGEIVDVVVMKDPQTKRSRGFGFITYSQSSMVDQ 66
>gi|119603186|gb|EAW82780.1| hCG2025340, isoform CRA_b [Homo sapiens]
Length = 445
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+A+ TVKK+FVGG+K D EE LR+YF Q+G IE + ++T++ +G KRGFAF+ F+D+
Sbjct: 26 RPDAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDH 85
Query: 138 DVVDKI 143
D VDKI
Sbjct: 86 DSVDKI 91
>gi|335302749|ref|XP_003133427.2| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like [Sus
scrofa]
Length = 447
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 62/96 (64%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 168 EVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFE 227
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G ++++ ++T++++G KRGF F F+D+D VDKI
Sbjct: 228 EYGKVDTIEIITDRQSGKKRGFGFFTFDDHDPVDKI 263
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 20/117 (17%)
Query: 29 EVRLAVEAGVLEVVTTRPTIN---NKAMEEAQSEEEVDMEIPGPPHMDKLEIGKPEANAT 85
E RL ++ L++ PTI+ N A EA++ E V +E K
Sbjct: 70 EKRLLDKSTALDL----PTISGQRNWATSEAKTLETVPLER------------KKREKEQ 113
Query: 86 VKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 114 FRKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 170
>gi|358415649|ref|XP_003583166.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Bos taurus]
Length = 321
Score = 83.2 bits (204), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPHMDKLEIG------------KPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD+ + PH +G +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDVAMNARPHKVDGRVGELKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|94482834|gb|ABF22450.1| heterogeneous nuclear ribonucleoprotein A1 [Takifugu rubripes]
Length = 255
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 65/99 (65%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S +EVD+ + PH + + + +P A+ TVKK+FVGG+K D EE +R+
Sbjct: 63 SVDEVDLAMTARPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHIRD 122
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF +FG IE ++++T++ +G KRGFAF+ F+D+D VD+I
Sbjct: 123 YFERFGKIEIIDIITDRNSGKKRGFAFVTFDDHDPVDRI 161
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 39/65 (60%), Gaps = 4/65 (6%)
Query: 78 GKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 136
G+PE ++K+F+GGL + D+ LR +F Q+GT+ ++ + + RGF F+ ++
Sbjct: 7 GEPEQ---LRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSS 63
Query: 137 YDVVD 141
D VD
Sbjct: 64 VDEVD 68
>gi|8393547|ref|NP_058944.1| heterogeneous nuclear ribonucleoprotein A1 [Rattus norvegicus]
gi|133255|sp|P04256.3|ROA1_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; Short=HDP; AltName: Full=Single-strand
RNA-binding protein; AltName: Full=hnRNP core protein A1
gi|204580|gb|AAA41314.1| helix destabilizing protein [Rattus norvegicus]
Length = 320
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 71/118 (60%), Gaps = 14/118 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCK 163
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI + N ++ V K +CK
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKIVIQKYHTVNGHNCEVRKALCK 183
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|410914419|ref|XP_003970685.1| PREDICTED: RNA-binding protein 34-like [Takifugu rubripes]
Length = 358
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 69/124 (55%), Gaps = 14/124 (11%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLKDQEEDD-LRE 104
S EE D + PH + + + GKPEA A VKK+FVGGLKD ED+ L E
Sbjct: 109 SPEEADSAMAARPHTVDGNPVEVKRAVAREDAGKPEALAKVKKIFVGGLKDDTEDNHLLE 168
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCK 163
+FSQFG IE ++++K++G KRGF F+ F D D DK F N + V V K + K
Sbjct: 169 HFSQFGEIEKAEVISDKDSGKKRGFGFVYFVDQDSADKSVVIKFHTINGHKVEVKKALTK 228
Query: 164 YNIE 167
++
Sbjct: 229 QELQ 232
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
K+FVGGL D ++D LR++F QFGT+ +V NK+ R F F+ ++ + D
Sbjct: 60 KLFVGGLNVDTDDDGLRKHFEQFGTLTDCVVVVNKQVQRSRCFGFVTYSSPEEAD 114
>gi|58331869|ref|NP_001011094.1| heterogeneous nuclear ribonucleoprotein A1 [Xenopus (Silurana)
tropicalis]
gi|54038494|gb|AAH84487.1| heterogeneous nuclear ribonucleoprotein A1 [Xenopus (Silurana)
tropicalis]
Length = 343
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 62/99 (62%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S +EVD + PH + + + +P A+ TVKK+FVGG+K D EE LRE
Sbjct: 61 STDEVDAAMSARPHKVDGRVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEHHLRE 120
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF Q+G IE + ++T++ +G KRGFAF+ F D+D VDKI
Sbjct: 121 YFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKI 159
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 79 KPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
K E ++K+F+GGL + D+ LRE+F Q+GT+ ++ + + RGF F+ ++
Sbjct: 3 KSEEPEQLRKLFIGGLSFETTDESLREHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSST 62
Query: 138 DVVD 141
D VD
Sbjct: 63 DEVD 66
>gi|148237229|ref|NP_001080689.1| heterogeneous nuclear ribonucleoprotein A1 [Xenopus laevis]
gi|28374304|gb|AAH45260.1| Hnrpa1 protein [Xenopus laevis]
Length = 399
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 62/99 (62%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S +EVD + PH + + + +P A+ TVKK+FVGG+K D EE LRE
Sbjct: 64 STDEVDAAMTARPHKVDGRVVEPKRAVSREDSSRPGAHLTVKKIFVGGIKEDTEEHHLRE 123
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF Q+G IE + ++T++ +G KRGFAF+ F D+D VDKI
Sbjct: 124 YFEQYGKIEVIEIMTDRGSGKKRGFAFVTFEDHDSVDKI 162
Score = 43.1 bits (100), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LRE+F Q+G + ++ + + RGF F+ ++ D
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLREHFEQWGALTDCVVMRDPNSKRSRGFGFVTYSSTD 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|40850963|gb|AAH65334.1| Hnrpa0l protein, partial [Danio rerio]
Length = 299
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/98 (46%), Positives = 60/98 (61%), Gaps = 13/98 (13%)
Query: 58 SEEEVDMEIPGPPHM------------DKLEIGKPEANATVKKMFVGGLKDQEEDD-LRE 104
S EE D + PH+ + + GKPE A VKK+FVGGLKD ED+ L++
Sbjct: 53 SIEEADAAMSARPHIVDGNNVDLKRAVAREDAGKPEMLAKVKKIFVGGLKDDIEDEHLQD 112
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
YFSQFG IE ++T+K+TG KRGF F+ F+D D DK
Sbjct: 113 YFSQFGPIEKAQVITDKDTGKKRGFGFVYFDDNDSADK 150
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)
Query: 88 KMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
K+FVGGL Q D+ LR +F Q+G + +V N+ R F F+ ++ + D
Sbjct: 4 KLFVGGLNVQTTDEGLRAHFEQYGQLTDCVVVMNQPLQRSRCFGFVTYSSIEEAD 58
>gi|223647288|gb|ACN10402.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
gi|223673171|gb|ACN12767.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
Length = 384
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 62/96 (64%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + + +P A+ TVKK+FVGG+K D E+ LR+YF
Sbjct: 66 EVDAAMEARPHKVDGRLVEPKRAVSREDSSRPGAHVTVKKIFVGGIKEDTEDSHLRDYFE 125
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
QFG IE ++++T++ +G KRGFAF+ F+D+D VD+I
Sbjct: 126 QFGKIEVIDIMTDRNSGKKRGFAFVTFDDHDAVDRI 161
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P ++K+F+GGL + D+ LR +F Q+G++ ++ + RGF F+ + +
Sbjct: 6 PREPEQLRKLFIGGLSFETTDESLRAHFEQWGSLTDCVVMRDPANKRSRGFGFVTYAGVN 65
Query: 139 VVD 141
VD
Sbjct: 66 EVD 68
>gi|193575575|ref|XP_001951661.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 87F-like
[Acyrthosiphon pisum]
Length = 303
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 52/67 (77%)
Query: 76 EIGKPEANATVKKMFVGGLKDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
+I KP+ TVKKMFV G+K+Q E+DL+EYF Q+G I ++ ++ +KETG ++GF FIEF+
Sbjct: 98 DIDKPDIAWTVKKMFVSGIKEQAEEDLKEYFGQYGNILNIQIIADKETGQRKGFGFIEFD 157
Query: 136 DYDVVDK 142
D D VDK
Sbjct: 158 DSDSVDK 164
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL D L+E+F ++G I V ++ + T RGF FI ++ +VD
Sbjct: 18 RKLFIGGLNYTTTNDSLKEFFEKWGDIVDVVVMKDPVTKRSRGFGFITYSKASMVD 73
>gi|410899428|ref|XP_003963199.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Takifugu rubripes]
Length = 291
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 65/99 (65%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S +EVD+ + PH + + + +P A+ TVKK+FVGG+K D EE +R+
Sbjct: 63 SVDEVDLAMTARPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHIRD 122
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF +FG IE ++++T++ +G KRGFAF+ F+D+D VD+I
Sbjct: 123 YFERFGKIEIIDIITDRNSGKKRGFAFVTFDDHDPVDRI 161
Score = 42.4 bits (98), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P ++K+F+GGL + D+ LR +F Q+GT+ ++ + + RGF F+ ++ D
Sbjct: 6 PREPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVD 65
Query: 139 VVD 141
VD
Sbjct: 66 EVD 68
>gi|426372865|ref|XP_004053334.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Gorilla gorilla gorilla]
Length = 306
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 191 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 250
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 251 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 287
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 69 PPHMDKLEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKR 127
P M K E P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T R
Sbjct: 123 PAVMSKSE--SPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSR 180
Query: 128 GFAFIEFNDYDVVD 141
GF F+ + + VD
Sbjct: 181 GFGFVTYATVEEVD 194
>gi|359073189|ref|XP_003587038.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Bos taurus]
Length = 321
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPHMDKLEI------------GKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD+ + PH E+ +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDVAMNARPHKGTEELWELKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|39654464|pdb|1PGZ|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggttag(6-Mi)
G); A Human Telomeric Repeat Containing 6-Methyl-8-(2-
Deoxy-Beta-Ribofuranosyl)isoxanthopteridine (6-Mi)
Length = 195
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 65 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 124
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 125 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 161
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 65
Query: 139 VVD 141
VD
Sbjct: 66 EVD 68
>gi|326936051|ref|XP_003214072.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like, partial
[Meleagris gallopavo]
Length = 176
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+
Sbjct: 71 SVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRD 130
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 131 YFGQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 169
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 77 IGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
+ P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ ++
Sbjct: 11 LQSPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYS 70
Query: 136 DYDVVD 141
+ VD
Sbjct: 71 SVEEVD 76
>gi|431921599|gb|ELK18951.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Pteropus alecto]
Length = 298
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 75 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 134
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 135 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 171
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 16 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 75
Query: 139 VVD 141
VD
Sbjct: 76 EVD 78
>gi|387016398|gb|AFJ50318.1| HNRPA1 protein [Crotalus adamanteus]
Length = 212
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 79 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 138
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 139 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 175
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ ++ +
Sbjct: 20 PKEPEQLRKLFIGGLSFETTDESLRNHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVE 79
Query: 139 VVD 141
VD
Sbjct: 80 EVD 82
>gi|326922673|ref|XP_003207572.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Meleagris gallopavo]
Length = 378
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LREYF
Sbjct: 85 EEVDAAMSARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYF 144
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 145 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 181
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 26 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 85
Query: 139 VVD 141
VD
Sbjct: 86 EVD 88
>gi|363735855|ref|XP_003641619.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Gallus gallus]
Length = 386
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LREYF
Sbjct: 93 EEVDAAMSARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYF 152
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 153 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 189
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 34 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 93
Query: 139 VVD 141
VD
Sbjct: 94 EVD 96
>gi|20664272|pdb|1L3K|A Chain A, Up1, The Two Rna-Recognition Motif Domain Of Hnrnp A1
gi|55670114|pdb|1U1K|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtt 7da
Ggg); A Human Telomeric Repeat Containing
7-Deaza-Adenine
gi|55670116|pdb|1U1L|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtt Prn
Ggg); A Human Telomeric Repeat Containing Nebularine
gi|55670118|pdb|1U1M|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtta 7gu
Gg); A Human Telomeric Repeat Containing 7-Deaza-Guanine
gi|55670120|pdb|1U1N|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtta (Prn)
Gg); A Human Telomeric Repeat Containing Nebularine
gi|55670122|pdb|1U1O|A Chain A, Crystal Structure Of Up1 Complexed With
D(Ttagggttag(Di)g); A Human Telomeric Repeat Containing
Inosine
gi|55670124|pdb|1U1P|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggtta 2pr
Gg); A Human Telomeric Repeat Containing 2-Aminopurine
gi|55670126|pdb|1U1Q|A Chain A, Crystal Structure Of Up1 Complexed With
D(Ttagggtta(Di)gg); A Human Telomeric Repeat Containing
Inosine
gi|55670128|pdb|1U1R|A Chain A, Crystal Structure Of Up1 Complexed With D(Ttagggttag(2pr)
G); A Human Telomeric Repeat Containing 2-Aminopurine
Length = 196
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|213511640|ref|NP_001134235.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
gi|209731708|gb|ACI66723.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
gi|303664010|gb|ADM16122.1| Heterogeneous nuclear ribonucleoprotein A1 [Salmo salar]
Length = 228
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 62/96 (64%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + + +P A+ TVKK+FVGG+K D E+ LR+YF
Sbjct: 66 EVDAAMEARPHKVDGRLVEPKRAVSREDSSRPGAHVTVKKIFVGGIKEDTEDSHLRDYFE 125
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
QFG IE ++++T++ +G KRGFAF+ F+D+D VD+I
Sbjct: 126 QFGKIEVIDIMTDRTSGKKRGFAFVTFDDHDAVDRI 161
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P ++K+F+GGL + D+ LRE+F Q+G++ ++ + RGF F ++ +
Sbjct: 6 PREPEQLRKLFIGGLSFETTDESLREHFEQWGSLTDCVVMRDPANKRSRGFGFATYSGVN 65
Query: 139 VVD 141
VD
Sbjct: 66 EVD 68
>gi|433286562|pdb|2LYV|A Chain A, Solution Structure Of The Two Rrm Domains Of Hnrnp A1
(up1) Using Segmental Isotope Labeling
Length = 197
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 67 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 126
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 127 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 163
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 8 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 67
Query: 139 VVD 141
VD
Sbjct: 68 EVD 70
>gi|71895177|ref|NP_001026424.1| heterogeneous nuclear ribonucleoprotein A1 [Gallus gallus]
gi|53130302|emb|CAG31480.1| hypothetical protein RCJMB04_6o1 [Gallus gallus]
Length = 368
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+
Sbjct: 64 SVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRD 123
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 124 YFGQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ ++ +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSSVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|449266123|gb|EMC77233.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Columba livia]
Length = 132
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+
Sbjct: 20 SVEEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRD 79
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 80 YFGQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 118
>gi|449506755|ref|XP_002199353.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Taeniopygia guttata]
Length = 385
Score = 82.4 bits (202), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LREYF
Sbjct: 92 EEVDAAMSARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYF 151
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 152 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 188
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 33 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 92
Query: 139 VVD 141
VD
Sbjct: 93 EVD 95
>gi|5542530|pdb|2UP1|A Chain A, Structure Of Up1-Telomeric Dna Complex
gi|39654500|pdb|1PO6|A Chain A, Crystal Structure Of Up1 Complexed With
D(Tagg(6mi)ttaggg): A Human Telomeric Repeat Containing
6-Methyl-8-(2-Deoxy-
Beta-Ribofuranosyl)isoxanthopteridine (6mi)
Length = 183
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 59 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 119 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 155
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 86 VKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + + VD
Sbjct: 6 LRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVD 62
>gi|47939618|gb|AAH71945.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
Length = 320
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
QFG IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQFGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|49617279|gb|AAT67404.1| heterogeneous nuclear ribonucleoprotein A1 [Equus caballus]
Length = 152
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 47 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 106
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 107 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 143
>gi|449266230|gb|EMC77309.1| Heterogeneous nuclear ribonucleoprotein A3 like protein 2, partial
[Columba livia]
Length = 356
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LREYF
Sbjct: 63 EEVDAAMSARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLREYF 122
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 123 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 159
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 4 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 63
Query: 139 VVD 141
VD
Sbjct: 64 EVD 66
>gi|157831273|pdb|1HA1|A Chain A, Hnrnp A1 (Rbd1,2) From Homo Sapiens
Length = 184
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|432876616|ref|XP_004073061.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 300
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 49/122 (40%), Positives = 67/122 (54%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYF 106
EE D + PH + + + +PEA A VKK+FVGGLKD EED L +YF
Sbjct: 58 EEADAAMAARPHTVDGNAVEVKRAVAREDANRPEALAKVKKIFVGGLKDDIEEDHLTDYF 117
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQ+G +E +++ KETG KRGF F+ F D+D DK F N + V V K + K
Sbjct: 118 SQYGEVEKSEVISEKETGKKRGFGFVYFTDHDSADKAVVVKFHTVNGHKVEVKKALTKQE 177
Query: 166 IE 167
++
Sbjct: 178 MQ 179
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
K+FVGGL D ++D LR++F QFGT+ +V NK+ R F F+ ++
Sbjct: 7 KLFVGGLNVDTDDDGLRKHFEQFGTLTDCVVVVNKQLQRSRCFGFVTYS 55
>gi|157834095|pdb|1UP1|A Chain A, Up1, The Two Rna-Recognition Motif Domain Of Hnrnp A1
Length = 182
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 64 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 123
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 124 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 160
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 5 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 64
Query: 139 VVD 141
VD
Sbjct: 65 EVD 67
>gi|344255674|gb|EGW11778.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Cricetulus griseus]
Length = 340
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|444520816|gb|ELV13038.1| Heterogeneous nuclear ribonucleoprotein A1 [Tupaia chinensis]
Length = 205
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFRFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|1711240|dbj|BAA13161.1| TIS [Mus musculus]
gi|119617170|gb|EAW96764.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_d [Homo
sapiens]
Length = 268
Score = 82.0 bits (201), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|351706129|gb|EHB09048.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Heterocephalus glaber]
Length = 313
Score = 82.0 bits (201), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|291410921|ref|XP_002721736.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 269
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 39.7 bits (91), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++++F+GGL + + LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRRLFIGGLSFETTNESLRSHFEQWGTLTDCMVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|291394515|ref|XP_002713754.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 274
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 41.2 bits (95), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|259089191|ref|NP_001158633.1| Heterogeneous nuclear ribonucleoprotein A0 [Oncorhynchus mykiss]
gi|225705442|gb|ACO08567.1| Heterogeneous nuclear ribonucleoprotein A0 [Oncorhynchus mykiss]
Length = 224
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 50/124 (40%), Positives = 68/124 (54%), Gaps = 14/124 (11%)
Query: 58 SEEEVDMEIPGPPHM------------DKLEIGKPEANATVKKMFVGGLKDQEEDD-LRE 104
S EE D + PH+ + + G+PEA A VKK+F+GGLKD EDD L +
Sbjct: 56 SGEEADAAMAARPHVVDGTNVELKRAVAREDAGRPEALAKVKKIFIGGLKDDIEDDHLND 115
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCK 163
YFSQFG IE ++++K+T KRGF F+ F D D DK F N + V V K + K
Sbjct: 116 YFSQFGAIEKAEVISDKQTLKKRGFGFVYFEDNDSADKAVVLKFHTINGHKVEVKKALTK 175
Query: 164 YNIE 167
++
Sbjct: 176 QEMQ 179
Score = 39.3 bits (90), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 88 KMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
K+FVGGL + DD LR++F Q+G + +V N++ R F F+ ++
Sbjct: 7 KLFVGGLNVETTDDGLRQHFEQYGQLTDCVVVQNQQLQRSRCFGFVTYS 55
>gi|296209046|ref|XP_002751367.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Callithrix jacchus]
Length = 320
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDNEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR + Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHSEQWGTLTDCVVMRDANTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|296209042|ref|XP_002751365.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Callithrix jacchus]
Length = 375
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDNEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR + Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHSEQWGTLTDCVVMRDANTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|444727997|gb|ELW68462.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Tupaia chinensis]
Length = 274
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 63/99 (63%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + E GKP A+ TVKK+FVGG+K D EE LR+
Sbjct: 59 SMAEVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHLRD 118
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I+++ ++T++++G KRGF F+ F+D+D V KI
Sbjct: 119 YFEEYGKIDTIEIITDRQSGKKRGFGFVPFDDHDPVGKI 157
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 9 RKLFIGGLSFETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVD 64
>gi|387018108|gb|AFJ51172.1| Heterogeneous nuclear ribonucleoprotein A3-like [Crotalus
adamanteus]
Length = 225
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 65 EEVDAAMSARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 124
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 125 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Score = 42.7 bits (99), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 75 LEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIE 133
+E P+ ++K+F+GGL + DD LRE+F ++G + ++ + +T RGF F+
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGALTDCVVMRDPQTKRSRGFGFVT 60
Query: 134 FNDYDVVD 141
++ + VD
Sbjct: 61 YSCVEEVD 68
>gi|441632410|ref|XP_003252929.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Nomascus leucogenys]
Length = 426
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 119 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 178
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 179 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 215
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 40/74 (54%), Gaps = 3/74 (4%)
Query: 69 PPHMDKLEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKR 127
P M K E P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T R
Sbjct: 51 PAVMSKSE--SPKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSR 108
Query: 128 GFAFIEFNDYDVVD 141
GF F+ + + VD
Sbjct: 109 GFGFVTYATVEEVD 122
>gi|440908270|gb|ELR58311.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Bos grunniens
mutus]
Length = 315
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 65 EEVDAAMNARPHKVDGRAVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 124
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 125 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 161
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ + K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF + + +
Sbjct: 6 PKEPEQLWKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGLVTYATVE 65
Query: 139 VVD 141
VD
Sbjct: 66 EVD 68
>gi|431909006|gb|ELK12597.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Pteropus alecto]
Length = 220
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + E GKP A+ TVKK+FVGG+K D EE ++YF
Sbjct: 3 EVDAAMAARPHSIDGRVVEPKRAVAREESGKPGAHVTVKKLFVGGIKEDTEEHHFKDYFE 62
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 63 EYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 98
>gi|119617172|gb|EAW96766.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_f [Homo
sapiens]
Length = 208
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|444723112|gb|ELW63776.1| Heterogeneous nuclear ribonucleoprotein A3 [Tupaia chinensis]
Length = 300
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 65/99 (65%), Gaps = 13/99 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 88 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 147
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRG 145
+FG IE++ ++ ++++G KRGFAF+ F+D+D VDKI G
Sbjct: 148 EKFGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKIVG 186
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 29 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 88
Query: 139 VVD 141
VD
Sbjct: 89 EVD 91
>gi|49402291|ref|NP_956398.1| heterogeneous nuclear ribonucleoprotein A1 [Danio rerio]
gi|27882514|gb|AAH44442.1| Heterogeneous nuclear ribonucleoprotein A1 [Danio rerio]
Length = 422
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/99 (44%), Positives = 63/99 (63%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLRE 104
S +EV+ + PH + + + KP A+ TVKK+FVGG+KD EE+ LR+
Sbjct: 83 SVDEVNASMDARPHKVDGRLVEPKRAVSREDSSKPFAHTTVKKIFVGGIKDDTEENHLRD 142
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF QFG IE V ++ + +TG KRGFAF+ F+D+D VD+I
Sbjct: 143 YFDQFGKIEVVEIMVDHKTGNKRGFAFVTFDDHDSVDRI 181
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 78 GKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 136
G+P ++K+F+GGL + DD LR +F Q+GT+ ++ + T RGF F+ ++
Sbjct: 24 GQPREPEQLRKLFIGGLSFETTDDSLRAHFEQWGTLTDCVVMKDPNTKRSRGFGFVTYSS 83
Query: 137 YDVVD 141
D V+
Sbjct: 84 VDEVN 88
>gi|403271005|ref|XP_003927441.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Saimiri
boliviensis boliviensis]
Length = 320
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|296188846|ref|XP_002742529.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Callithrix jacchus]
Length = 320
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 38.9 bits (89), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKPFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDANTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|75517570|gb|AAI03708.1| HNRPA1 protein [Homo sapiens]
Length = 267
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|148671985|gb|EDL03932.1| mCG15678, isoform CRA_c [Mus musculus]
Length = 335
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 81 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 140
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 141 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 177
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 22 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 81
Query: 139 VVD 141
VD
Sbjct: 82 EVD 84
>gi|327284183|ref|XP_003226818.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
1-like [Anolis carolinensis]
Length = 386
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 89 EEVDAAMAARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 148
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 149 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 185
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 30 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 89
Query: 139 VVD 141
VD
Sbjct: 90 EVD 92
>gi|209733550|gb|ACI67644.1| Heterogeneous nuclear ribonucleoprotein A0 [Salmo salar]
Length = 181
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/68 (60%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 76 EIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
+ GKPEA A VKK+F+GGLKD ED+ L EYFSQFG IE ++ KETG KRGF F+ F
Sbjct: 88 DAGKPEALAKVKKIFIGGLKDDIEDEHLNEYFSQFGEIEKAEVIAEKETGKKRGFGFVHF 147
Query: 135 NDYDVVDK 142
D D DK
Sbjct: 148 TDNDSADK 155
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 83 NATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
++ + K+FVGGL D ++D LR++F Q+G + +V NK+ R F F+ ++
Sbjct: 4 SSQLCKLFVGGLNVDTDDDGLRKHFEQYGQLTDCVVVVNKQLQRSRCFGFVTYS 57
>gi|148671983|gb|EDL03930.1| mCG15678, isoform CRA_a [Mus musculus]
Length = 371
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 64 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 123
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 124 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 160
Score = 39.3 bits (90), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 86 VKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + + VD
Sbjct: 11 LRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVD 67
>gi|426234977|ref|XP_004011468.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Ovis aries]
Length = 319
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|403285634|ref|XP_003934122.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Saimiri
boliviensis boliviensis]
Length = 258
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 66/123 (53%), Gaps = 14/123 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFGT+E ++ +K +G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGTVEKAEIIADKLSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 IEF 168
I F
Sbjct: 179 IHF 181
Score = 43.1 bits (100), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|291389294|ref|XP_002711081.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Oryctolagus
cuniculus]
Length = 371
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|390464176|ref|XP_003733182.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Callithrix jacchus]
Length = 320
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFDTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|327263824|ref|XP_003216717.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Anolis
carolinensis]
Length = 354
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ ++ +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRNHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|344266093|ref|XP_003405115.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Loxodonta africana]
Length = 370
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ ++ +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|402908388|ref|XP_003916925.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Papio anubis]
gi|402908390|ref|XP_003916926.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Papio anubis]
Length = 351
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|148682805|gb|EDL14752.1| mCG117968 [Mus musculus]
Length = 317
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 63 EEVDAAMNARPHKVDGRVVEPKRTVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 122
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 123 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 159
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 86 VKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
++K+F+GGL + D+ LR +F Q+GT+ + ++ + T RGF F+ + + VD
Sbjct: 10 LRKLFIGGLSFETTDESLRSHFEQWGTLTNCVVMRDPNTKRSRGFGFVTYATVEEVD 66
>gi|148671986|gb|EDL03933.1| mCG15678, isoform CRA_d [Mus musculus]
Length = 326
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 72 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 131
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 132 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 168
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 13 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 72
Query: 139 VVD 141
VD
Sbjct: 73 EVD 75
>gi|119617173|gb|EAW96767.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_g [Homo
sapiens]
Length = 319
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 21 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 80
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 81 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 117
>gi|90075098|dbj|BAE87229.1| unnamed protein product [Macaca fascicularis]
Length = 304
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|444513904|gb|ELV10489.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Tupaia
chinensis]
Length = 432
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 61 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 120
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 121 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 157
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 2 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 61
Query: 139 VVD 141
VD
Sbjct: 62 EVD 64
>gi|426341487|ref|XP_004036066.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Gorilla gorilla gorilla]
Length = 320
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 63/97 (64%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++++G KRGFAF+ F+D+D +DKI
Sbjct: 126 EQYGKIEVIEIMTDRDSGKKRGFAFVTFDDHDSLDKI 162
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+G + ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|74204146|dbj|BAE39838.1| unnamed protein product [Mus musculus]
Length = 320
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|395540858|ref|XP_003772367.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Sarcophilus
harrisii]
Length = 372
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|344266091|ref|XP_003405114.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Loxodonta africana]
Length = 320
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ ++ +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|296211878|ref|XP_002752596.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Callithrix
jacchus]
Length = 327
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 21 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 80
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 81 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 117
>gi|14043070|ref|NP_112420.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Homo sapiens]
gi|397472158|ref|XP_003807623.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Pan
paniscus]
gi|288558857|sp|P09651.5|ROA1_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand RNA-binding
protein; AltName: Full=hnRNP core protein A1
gi|119617168|gb|EAW96762.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_b [Homo
sapiens]
gi|119617174|gb|EAW96768.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_b [Homo
sapiens]
gi|380812310|gb|AFE78029.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Macaca
mulatta]
Length = 372
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|335347347|ref|NP_001229438.1| heterogeneous nuclear ribonucleoprotein A1 [Equus caballus]
gi|410964601|ref|XP_003988842.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Felis catus]
gi|426224339|ref|XP_004006329.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Ovis aries]
gi|74222222|dbj|BAE26919.1| unnamed protein product [Mus musculus]
gi|149031878|gb|EDL86790.1| rCG50547, isoform CRA_b [Rattus norvegicus]
gi|149031880|gb|EDL86792.1| rCG50547, isoform CRA_b [Rattus norvegicus]
Length = 373
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|85060507|ref|NP_001034218.1| heterogeneous nuclear ribonucleoprotein A1 isoform b [Mus musculus]
gi|59808855|gb|AAH89340.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|62531241|gb|AAH92395.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|74144667|dbj|BAE27318.1| unnamed protein product [Mus musculus]
gi|74185136|dbj|BAE39169.1| unnamed protein product [Mus musculus]
gi|74219989|dbj|BAE40574.1| unnamed protein product [Mus musculus]
Length = 373
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|395835057|ref|XP_003790500.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Otolemur
garnettii]
Length = 373
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTXXXXXVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|402908392|ref|XP_003916927.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Papio anubis]
Length = 343
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 58 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 117
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 118 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 154
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 86 VKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + + VD
Sbjct: 5 LRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVD 61
>gi|291394513|ref|XP_002713753.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|348511912|ref|XP_003443487.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Oreochromis niloticus]
Length = 301
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 57/98 (58%), Gaps = 13/98 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLRE 104
+ EE D + PH + + + KPEA A VKK+FVGGLKD EE L E
Sbjct: 56 TPEEADAAMAARPHTVDGNAVEVKRAVAREDANKPEALAKVKKIFVGGLKDDIEEQHLTE 115
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
YFSQ+G +E +++ KETG KRGF F+ F D+D DK
Sbjct: 116 YFSQYGQVEKSEVISEKETGKKRGFGFVYFTDHDAADK 153
Score = 44.3 bits (103), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
K+FVGGL D ++D LR++F Q+GT+ +V NK+ R F F+ ++
Sbjct: 7 KLFVGGLNVDTDDDGLRKHFEQYGTLTDCVVVVNKQLQRSRCFGFVTYS 55
>gi|291410919|ref|XP_002721735.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 38.9 bits (89), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++++F+GGL + + LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRRLFIGGLSFETTNESLRSHFEQWGTLTDCMVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|111306451|gb|AAI21134.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
Length = 320
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|184185549|gb|ACC68948.1| heterogeneous nuclear ribonucleoprotein A1 (predicted) [Rhinolophus
ferrumequinum]
Length = 299
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
>gi|426224337|ref|XP_004006328.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Ovis aries]
Length = 310
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|359063952|ref|XP_003585907.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Bos taurus]
Length = 320
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFRFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|426247087|ref|XP_004017318.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ + K+F+GGL + + LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPKQLWKLFIGGLSFETTNESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|13436308|gb|AAH04945.1| Unknown (protein for IMAGE:3615335), partial [Homo sapiens]
Length = 298
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 44 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 103
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 104 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 140
>gi|397520388|ref|XP_003830301.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Pan paniscus]
Length = 320
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ + ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTACVVMRDPNTKRSRGFEFVTYAAVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|119617171|gb|EAW96765.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_e [Homo
sapiens]
Length = 317
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|4504445|ref|NP_002127.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Homo sapiens]
gi|6754220|ref|NP_034577.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Mus musculus]
gi|114052384|ref|NP_001039376.1| heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|116175259|ref|NP_001070686.1| heterogeneous nuclear ribonucleoprotein A1 [Sus scrofa]
gi|148529006|ref|NP_001091892.1| heterogeneous nuclear ribonucleoprotein A1-like 1 [Pan troglodytes]
gi|308193354|ref|NP_001184040.1| heterogeneous nuclear ribonucleoprotein A1 [Pan troglodytes]
gi|73996139|ref|XP_848386.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Canis lupus familiaris]
gi|332864208|ref|XP_003318234.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Pan troglodytes]
gi|354503661|ref|XP_003513899.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Cricetulus
griseus]
gi|402886231|ref|XP_003906538.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Papio
anubis]
gi|410058477|ref|XP_003954396.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Pan troglodytes]
gi|410964599|ref|XP_003988841.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Felis catus]
gi|426224335|ref|XP_004006327.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Ovis aries]
gi|1350822|sp|P49312.2|ROA1_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=HDP-1; AltName:
Full=Helix-destabilizing protein; AltName:
Full=Single-strand-binding protein; AltName:
Full=Topoisomerase-inhibitor suppressed; AltName:
Full=hnRNP core protein A1
gi|156637352|sp|A5A6H4.1|ROA1_PANTR RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand-binding protein;
AltName: Full=hnRNP core protein A1
gi|172046785|sp|P09867.2|ROA1_BOVIN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand RNA-binding
protein; AltName: Full=Unwinding protein 1; Short=UP1;
AltName: Full=hnRNP core protein A1
gi|70819|pir||DDRT helix-destabilizing protein - rat
gi|87651|pir||S04617 heterogeneous ribonuclear particle protein A1 - human
gi|193324|gb|AAA37633.1| RNA binding protein [Mus musculus]
gi|296650|emb|CAA31191.1| hnrnp a1 protein [Homo sapiens]
gi|496898|emb|CAA56072.1| hnRNPcore protein A1 [Homo sapiens]
gi|1711242|dbj|BAA13162.1| TIS [Mus musculus]
gi|12803103|gb|AAH02355.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|12841583|dbj|BAB25267.1| unnamed protein product [Mus musculus]
gi|15082486|gb|AAH12158.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|16307046|gb|AAH09600.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|21707258|gb|AAH33714.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|26353286|dbj|BAC40273.1| unnamed protein product [Mus musculus]
gi|47125420|gb|AAH70315.1| HNRPA1 protein [Homo sapiens]
gi|49257442|gb|AAH73162.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|49522847|gb|AAH74502.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|51490837|emb|CAH18571.1| heterogeneous nuclear ribonucleoprotein A1 [Pan troglodytes]
gi|51873929|gb|AAH80675.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|53236995|gb|AAH83136.1| Heterogeneous nuclear ribonucleoprotein A1 [Mus musculus]
gi|55930978|gb|AAH52296.1| Heterogeneous nuclear ribonucleoprotein A1 [Homo sapiens]
gi|56971262|gb|AAH88150.1| Hnrpa1 protein [Rattus norvegicus]
gi|67968511|dbj|BAE00617.1| unnamed protein product [Macaca fascicularis]
gi|74180018|dbj|BAE36552.1| unnamed protein product [Mus musculus]
gi|74183107|dbj|BAE22518.1| unnamed protein product [Mus musculus]
gi|74184983|dbj|BAE39104.1| unnamed protein product [Mus musculus]
gi|74189079|dbj|BAE39302.1| unnamed protein product [Mus musculus]
gi|74204144|dbj|BAE39837.1| unnamed protein product [Mus musculus]
gi|74204330|dbj|BAE39920.1| unnamed protein product [Mus musculus]
gi|74204859|dbj|BAE20929.1| unnamed protein product [Mus musculus]
gi|74214152|dbj|BAE40333.1| unnamed protein product [Mus musculus]
gi|74214339|dbj|BAE40409.1| unnamed protein product [Mus musculus]
gi|86823844|gb|AAI05414.1| Heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|115371763|gb|ABI96206.1| ROA1 [Sus scrofa]
gi|119617167|gb|EAW96761.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|119617175|gb|EAW96769.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|119617176|gb|EAW96770.1| heterogeneous nuclear ribonucleoprotein A1, isoform CRA_a [Homo
sapiens]
gi|146741382|dbj|BAF62347.1| heterogeneous nuclear ribonucleoprotein A1, transcript variant 1
[Pan troglodytes verus]
gi|148671984|gb|EDL03931.1| mCG15678, isoform CRA_b [Mus musculus]
gi|149031879|gb|EDL86791.1| rCG50547, isoform CRA_c [Rattus norvegicus]
gi|149031881|gb|EDL86793.1| rCG50547, isoform CRA_c [Rattus norvegicus]
gi|158255662|dbj|BAF83802.1| unnamed protein product [Homo sapiens]
gi|208966454|dbj|BAG73241.1| heterogeneous nuclear ribonucleoprotein A1 [synthetic construct]
gi|296487907|tpg|DAA30020.1| TPA: heterogeneous nuclear ribonucleoprotein A1 [Bos taurus]
gi|335772612|gb|AEH58124.1| heterogeneous nuclear ribonucleoprotein A-like protein [Equus
caballus]
gi|380812306|gb|AFE78027.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Macaca
mulatta]
gi|380812308|gb|AFE78028.1| heterogeneous nuclear ribonucleoprotein A1 isoform a [Macaca
mulatta]
Length = 320
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|395519835|ref|XP_003764047.1| PREDICTED: uncharacterized protein LOC100918877 [Sarcophilus
harrisii]
Length = 495
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 201 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 260
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 261 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 297
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 142 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 201
Query: 139 VVD 141
VD
Sbjct: 202 EVD 204
>gi|74220381|dbj|BAE31416.1| unnamed protein product [Mus musculus]
Length = 320
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|148697232|gb|EDL29179.1| mCG1035404 [Mus musculus]
Length = 239
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 65 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 124
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 125 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 75 LEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIE 133
+E P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 134 FNDYDVVD 141
++ + VD
Sbjct: 61 YSCVEEVD 68
>gi|440900708|gb|ELR51786.1| hypothetical protein M91_06025, partial [Bos grunniens mutus]
Length = 315
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 61 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 120
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 121 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 157
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 2 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 61
Query: 139 VVD 141
VD
Sbjct: 62 EVD 64
>gi|38328245|gb|AAH62235.1| Hnrpa1 protein [Rattus norvegicus]
Length = 313
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|426241336|ref|XP_004014547.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKGSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|426223452|ref|XP_004005889.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|149615308|ref|XP_001519571.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like, partial
[Ornithorhynchus anatinus]
Length = 270
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D EDDL E+F
Sbjct: 50 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEDDLVEHF 109
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFG +E ++ +K++G KRGF F+ F +D DK F + + V V K V K +
Sbjct: 110 SQFGPVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIHGHRVEVKKAVPKED 169
Query: 166 IE 167
I
Sbjct: 170 IH 171
>gi|114577985|ref|XP_001144332.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Pan troglodytes]
Length = 320
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFFGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|380792669|gb|AFE68210.1| heterogeneous nuclear ribonucleoprotein A1 isoform a, partial
[Macaca mulatta]
Length = 317
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|157929888|gb|ABW04132.1| Hnrpa01 protein [Epinephelus coioides]
Length = 329
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Query: 76 EIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
+ G+PEA A VKK+F+GGLKD ED+ L EYFSQ+G IE ++++K+TG KRGF F+ F
Sbjct: 91 DAGRPEALAKVKKIFIGGLKDDVEDEHLHEYFSQYGVIEKAEVISDKQTGKKRGFGFVYF 150
Query: 135 NDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYNIE 167
D D DK + N + V V K + K ++
Sbjct: 151 EDNDSADKAVVLKYHTINGHKVEVKKALTKQEMQ 184
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 88 KMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
K+FVGGL Q +D LR++F Q+G + +V N++ R F F+ ++
Sbjct: 12 KLFVGGLNVQTTNDGLRQHFEQYGQLTDCVVVQNQQLQRSRCFGFVTYS 60
>gi|190360152|sp|P0C7M2.1|RA1L3_HUMAN RecName: Full=Putative heterogeneous nuclear ribonucleoprotein
A1-like 3; Short=hnRNP A1-like 3; AltName: Full=hnRNP
core protein A1-like 3
gi|119621694|gb|EAX01289.1| hCG2020860, isoform CRA_b [Homo sapiens]
gi|119621695|gb|EAX01290.1| hCG2020860, isoform CRA_b [Homo sapiens]
Length = 320
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|440901911|gb|ELR52772.1| Heterogeneous nuclear ribonucleoprotein A3, partial [Bos grunniens
mutus]
Length = 182
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 58 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 117
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 118 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 154
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 86 VKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ + VD
Sbjct: 5 LRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVEEVD 61
>gi|355564301|gb|EHH20801.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Macaca
mulatta]
Length = 372
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|387018106|gb|AFJ51171.1| Heterogeneous nuclear ribonucleoprotein A0 [Crotalus adamanteus]
Length = 307
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 68/122 (55%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E+DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNVVELKRAVSREDSARPGAHAKVKKLFVGGLKGDLGENDLVEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFG +E +++NK++G KRGF F+ F ++D DK F + V V K V + +
Sbjct: 119 SQFGPVEKAEIISNKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPRED 178
Query: 166 IE 167
I+
Sbjct: 179 IQ 180
Score = 43.5 bits (101), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LREYF +GT+ +V N +T R F F+ ++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTTEAGLREYFEAYGTLTDCVVVLNPQTKRSRCFGFVTYSAVEEAD 62
>gi|355766014|gb|EHH62484.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Macaca
fascicularis]
Length = 372
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.4 bits (93), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|119572425|gb|EAW52040.1| heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_a
[Homo sapiens]
Length = 309
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNTTPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|45535514|emb|CAG14940.1| heterogeneous nuclear ribonucleoprotein [Salmo salar]
Length = 120
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 48/68 (70%), Gaps = 1/68 (1%)
Query: 76 EIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
+ GKPEA A VKK+F+GGLKD ED+ L +YFSQFG IE ++ KETG KRGF F+ F
Sbjct: 24 DAGKPEALAKVKKIFIGGLKDDIEDEHLNDYFSQFGEIEKAEVIAEKETGKKRGFGFVHF 83
Query: 135 NDYDVVDK 142
D D DK
Sbjct: 84 TDNDSADK 91
>gi|29125866|emb|CAD67787.1| hn ribonucleoprotein A2 [Tetraodon nigroviridis]
Length = 191
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S +EVD+ + PH + + + +P A+ TVKK+FVGG+K D EE +R+
Sbjct: 59 SVDEVDLAMGARPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHIRD 118
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF +FG IE ++++ ++ +G KRGFAF+ F+D+D VD+I
Sbjct: 119 YFERFGKIEIIDIIADRNSGKKRGFAFVTFDDHDPVDRI 157
Score = 43.1 bits (100), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P ++K+F+GGL + D+ LR +F Q+GT+ ++ + + RGF F+ ++ D
Sbjct: 2 PREPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPSSKRSRGFGFVTYSSVD 61
Query: 139 VVD 141
VD
Sbjct: 62 EVD 64
>gi|74141832|dbj|BAE40987.1| unnamed protein product [Mus musculus]
Length = 320
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGEIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|109131409|ref|XP_001082949.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
3 [Macaca mulatta]
gi|297304279|ref|XP_001082690.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Macaca mulatta]
Length = 320
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|332206587|ref|XP_003252377.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Nomascus leucogenys]
Length = 321
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P+A+ TVKK+FVGG+K D EE LR YF
Sbjct: 67 EEVDAAMNARPHKVDGRVVEPKRAISREDSQRPDAHLTVKKIFVGGIKEDTEEHHLRGYF 126
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 127 EQYGKIEVIEIMTDQGSGKKRGFAFLTFDDHDSVDKI 163
Score = 38.9 bits (89), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + + LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 8 PKEPKQLRKLFIGGLSFETTNESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 67
Query: 139 VVD 141
VD
Sbjct: 68 EVD 70
>gi|80477437|gb|AAI08267.1| Heterogeneous nuclear ribonucleoprotein A1-like 2 [Homo sapiens]
Length = 320
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNTTPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|58761496|ref|NP_001011724.1| heterogeneous nuclear ribonucleoprotein A1-like 2 [Homo sapiens]
gi|58761498|ref|NP_001011725.1| heterogeneous nuclear ribonucleoprotein A1-like 2 [Homo sapiens]
gi|190356061|sp|Q32P51.2|RA1L2_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A1-like 2;
Short=hnRNP A1-like 2; AltName: Full=hnRNP core protein
A1-like 2
gi|119572426|gb|EAW52041.1| heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_b
[Homo sapiens]
gi|119572427|gb|EAW52042.1| heterogeneous nuclear ribonucleoprotein A1-like, isoform CRA_b
[Homo sapiens]
Length = 320
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNTTPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|36102|emb|CAA29922.1| unnamed protein product [Homo sapiens]
Length = 320
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
QFG IE + ++T++ +G K+GFAF+ F+D+D VDKI
Sbjct: 126 EQFGKIEVIEIMTDRGSGKKKGFAFVTFDDHDSVDKI 162
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|119923161|ref|XP_001251082.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like 2
isoform 2 [Bos taurus]
gi|297471765|ref|XP_002685448.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like 2 [Bos
taurus]
gi|296490543|tpg|DAA32656.1| TPA: heterogeneous nuclear ribonucleoprotein A1-like [Bos taurus]
Length = 320
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRAVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDQGSGKKRGFAFVTFDDHDSVDKI 162
Score = 38.9 bits (89), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ + K+F+GGL+ + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLWKLFIGGLRFETIDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYTTVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|390465683|ref|XP_003733453.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Callithrix jacchus]
Length = 320
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 61/97 (62%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVTEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.4 bits (93), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ + ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKESEQLRKLFIGGLSFETTDESLRSHFEQWGTLIDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|344246565|gb|EGW02669.1| Heterogeneous nuclear ribonucleoprotein A3 [Cricetulus griseus]
Length = 261
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 21 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 80
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 81 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 117
>gi|47218115|emb|CAG09987.1| unnamed protein product [Tetraodon nigroviridis]
Length = 419
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 69/120 (57%), Gaps = 14/120 (11%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + + KP A+ +VKK+FVGG+K D EED +R+
Sbjct: 57 SLREVDEAMKARPHKVDGRVVEPKRAVSREDSNKPGAHLSVKKIFVGGIKEDTEEDQIRD 116
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCK 163
YF ++G IE V+++ + TG KRGF F+ F+D+D VDKI + N ++ V K + K
Sbjct: 117 YFEKYGKIECVDIMEERSTGKKRGFCFVTFDDHDTVDKIVAQKYHTINSHNCEVRKALSK 176
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 86 VKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
++K+F+GGL + E+ LR +F ++G++ ++ RGF F+ ++ VD
Sbjct: 6 LRKLFIGGLSFETTEESLRAHFEKWGSLTDCVVMREPSCKRSRGFGFVTYSSLREVD 62
>gi|291389620|ref|XP_002711397.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 3
[Oryctolagus cuniculus]
Length = 268
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR++F
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|291384354|ref|XP_002708769.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 274
Score = 80.5 bits (197), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVLREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 38.9 bits (89), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + ++ LR +F Q+G + ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFEMTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|355565001|gb|EHH21490.1| hypothetical protein EGK_04572, partial [Macaca mulatta]
Length = 357
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 65 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 124
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 125 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 65
Query: 139 VVD 141
VD
Sbjct: 66 EVD 68
>gi|55250278|gb|AAH85474.1| Hnrpa3 protein [Mus musculus]
Length = 313
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 21 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 80
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 81 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 117
>gi|34785465|gb|AAH57655.1| Hnrpa3 protein, partial [Mus musculus]
Length = 303
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 65 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 124
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 125 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 75 LEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIE 133
+E P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 134 FNDYDVVD 141
++ + VD
Sbjct: 61 YSCVEEVD 68
>gi|296207810|ref|XP_002750803.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Callithrix jacchus]
Length = 319
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 60/97 (61%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A TVKK+FVGG+K D EE LR+YF
Sbjct: 65 EEVDAAMNARPHKVDRRVVEPKRAVSREDSQRPGAYLTVKKIFVGGIKEDTEEHHLRDYF 124
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGF F+ FND+D VDKI
Sbjct: 125 EQYGQIEVIEIMTDRGSGKKRGFTFVTFNDHDSVDKI 161
Score = 35.8 bits (81), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 32/62 (51%)
Query: 80 PEANATVKKMFVGGLKDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
P+ ++K+F+GGL + + LR +F Q+ + ++ + T RGF F + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETNESLRSHFEQWEMLTDCVVMRDPNTKHSRGFGFFMYATVEE 66
Query: 140 VD 141
VD
Sbjct: 67 VD 68
>gi|187607268|ref|NP_001120028.1| heterogeneous nuclear ribonucleoprotein A3 [Xenopus (Silurana)
tropicalis]
gi|165971520|gb|AAI58334.1| LOC100144993 protein [Xenopus (Silurana) tropicalis]
gi|170284841|gb|AAI61197.1| LOC100144993 protein [Xenopus (Silurana) tropicalis]
Length = 383
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 79 EEVDAAMSARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYF 138
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 139 QSYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 175
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F Q+G + ++ + +T RGF F+ ++ +
Sbjct: 20 PKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVE 79
Query: 139 VVD 141
VD
Sbjct: 80 EVD 82
>gi|403255345|ref|XP_003920400.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Saimiri
boliviensis boliviensis]
Length = 320
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D +DKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSMDKI 162
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKELEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|348580545|ref|XP_003476039.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Cavia
porcellus]
Length = 355
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 65 EEVDAAMCARPHKVDGRVVEPKRAISREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 124
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 125 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 75 LEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIE 133
+E P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 134 FNDYDVVD 141
++ + VD
Sbjct: 61 YSCVEEVD 68
>gi|432112551|gb|ELK35267.1| Coatomer subunit zeta-1 [Myotis davidii]
Length = 451
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A+ TVKK+FVGG+K D EE LR+YF Q+G IE + ++T++ +G KRGFAF+ F+D+
Sbjct: 26 RPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDH 85
Query: 138 DVVDKI 143
D VDKI
Sbjct: 86 DSVDKI 91
>gi|348570610|ref|XP_003471090.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Cavia
porcellus]
Length = 356
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 65 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 124
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 125 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 75 LEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIE 133
+E P+ ++K+F+GGL + DD LRE+F ++GT+ ++ +T RGF F+
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDRVVMRVPQTKRSRGFGFVT 60
Query: 134 FNDYDVVD 141
++ + VD
Sbjct: 61 YSCVEEVD 68
>gi|431894940|gb|ELK04733.1| Heterogeneous nuclear ribonucleoprotein A3 [Pteropus alecto]
Length = 245
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
KP A+ TVKK+FVGG+K D EE +LR+YF ++G IE++ ++ ++++G KRGFAF+ F+D+
Sbjct: 26 KPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDH 85
Query: 138 DVVDKI 143
D VDKI
Sbjct: 86 DTVDKI 91
>gi|126290015|ref|XP_001367952.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Monodelphis domestica]
Length = 486
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 65/122 (53%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 241 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLVEHF 300
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFGT+E ++ +K++G KRGF F+ F +D DK F + V V K V K +
Sbjct: 301 SQFGTVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQGHRVEVKKAVPKED 360
Query: 166 IE 167
I
Sbjct: 361 IH 362
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 38/69 (55%), Gaps = 5/69 (7%)
Query: 78 GKPEA----NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
GK EA N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+
Sbjct: 176 GKAEAAEMENSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFV 235
Query: 133 EFNDYDVVD 141
+++ + D
Sbjct: 236 TYSNVEEAD 244
>gi|291402435|ref|XP_002717573.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 3
[Oryctolagus cuniculus]
Length = 268
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR++F
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|390474591|ref|XP_002757923.2| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 3 [Callithrix jacchus]
Length = 339
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P+A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAVNARPHNVDGRVVEPKRAVSREDSQRPDAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KR FAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRDFAFVTFDDHDSVDKI 162
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ +K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQPRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|440905636|gb|ELR55990.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Bos grunniens
mutus]
Length = 180
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A+ TVKK+FVGG+K D EE LR+YF Q+G IE + ++T++ +G KRGFAF+ F+D+
Sbjct: 89 RPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDH 148
Query: 138 DVVDKI 143
D VDKI
Sbjct: 149 DSVDKI 154
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 86 VKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ +
Sbjct: 5 LRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTY 54
>gi|194388148|dbj|BAG65458.1| unnamed protein product [Homo sapiens]
Length = 323
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 65 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 124
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 125 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 40/68 (58%), Gaps = 1/68 (1%)
Query: 75 LEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIE 133
+E P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFAT 60
Query: 134 FNDYDVVD 141
++ + VD
Sbjct: 61 YSCVEEVD 68
>gi|354472305|ref|XP_003498380.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Cricetulus griseus]
Length = 423
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 131 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 190
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 191 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 227
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 72 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 131
Query: 139 VVD 141
VD
Sbjct: 132 EVD 134
>gi|390474589|ref|XP_002757922.2| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Callithrix jacchus]
Length = 320
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P+A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAVNARPHNVDGRVVEPKRAVSREDSQRPDAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KR FAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRDFAFVTFDDHDSVDKI 162
Score = 38.9 bits (89), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ +K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQPRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|410036104|ref|XP_525973.4| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Pan
troglodytes]
Length = 371
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 114 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 173
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 174 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 210
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 55 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 114
Query: 139 VVD 141
VD
Sbjct: 115 EVD 117
>gi|289742401|gb|ADD19948.1| RNA-binding protein musashi [Glossina morsitans morsitans]
Length = 469
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/89 (51%), Positives = 60/89 (67%), Gaps = 6/89 (6%)
Query: 83 NATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N +VKK+FVGGLKD +E L EYFS+FG + S+ ++T+K TG +RGFAF+EF+DYD VD
Sbjct: 125 NFSVKKLFVGGLKDNHDESCLTEYFSEFGKVVSIKILTDKTTGKRRGFAFVEFDDYDAVD 184
Query: 142 K--IRGFAFIEFNDYDVVDKIVCKYNIEF 168
K +R I+ Y VVD YN E
Sbjct: 185 KAILRKTHSIK---YVVVDVKKSVYNQEL 210
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 86 VKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIR 144
++K+F+GGL E+ L+E+++Q+G + V ++ + T RGF FI + +VDK +
Sbjct: 36 LRKLFIGGLASYTTEESLKEFYNQWGKVVDVVVMRDNMTKRSRGFGFITYTKSYMVDKAQ 95
>gi|395837290|ref|XP_003791571.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Otolemur
garnettii]
Length = 347
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 65 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 124
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 125 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 75 LEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIE 133
+E P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 134 FNDYDVVD 141
++ + VD
Sbjct: 61 YSCVEEVD 68
>gi|119597384|gb|EAW76978.1| hCG2023776 [Homo sapiens]
Length = 317
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 67/116 (57%), Gaps = 19/116 (16%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D +E LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVESKRAVSREDSQRPGAHLTVKKIFVGGIKEDTKEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDKIVC 162
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDK I Y V+ +C
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDK------IVIQKYHTVNGHIC 175
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + + LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPKQLRKLFIGGLSFETTNESLRSHFEQWGTLMDCVVMRDPNTKCSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|291401097|ref|XP_002716928.1| PREDICTED: mCG1035404-like isoform 2 [Oryctolagus cuniculus]
Length = 355
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 65 EEVDAAMCARPHKVDGRAVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 124
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 125 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 75 LEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIE 133
+E P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 134 FNDYDVVD 141
++ + VD
Sbjct: 61 YSCVEEVD 68
>gi|74004700|ref|XP_862045.1| PREDICTED: uncharacterized protein LOC608074 isoform 11 [Canis
lupus familiaris]
gi|410968906|ref|XP_003990940.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Felis catus]
Length = 356
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 65 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 124
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 125 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 75 LEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIE 133
+E P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 134 FNDYDVVD 141
++ + VD
Sbjct: 61 YSCVEEVD 68
>gi|157277969|ref|NP_444493.1| heterogeneous nuclear ribonucleoprotein A3 isoform c [Mus musculus]
gi|162329579|ref|NP_001104765.1| heterogeneous nuclear ribonucleoprotein A3 isoform b [Rattus
norvegicus]
gi|335303045|ref|XP_003359613.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
2 [Sus scrofa]
gi|25991929|gb|AAN76992.1|AF463524_1 ribonucleoprotein heterogeneous nuclear ribonucleoprotein A3 [Mus
musculus]
gi|23274114|gb|AAH23828.1| Hnrpa3 protein [Mus musculus]
gi|34327779|gb|AAQ63631.1| heterogeneous nuclear ribonucleoprotein A3 variant b [Rattus
norvegicus]
gi|111599310|gb|AAI16251.1| Hnrpa3 protein [Mus musculus]
gi|111599547|gb|AAI16252.1| Hnrpa3 protein [Mus musculus]
gi|148695243|gb|EDL27190.1| mCG1305, isoform CRA_d [Mus musculus]
gi|148695244|gb|EDL27191.1| mCG1305, isoform CRA_d [Mus musculus]
gi|148703315|gb|EDL35262.1| mCG48756 [Mus musculus]
gi|149022302|gb|EDL79196.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022303|gb|EDL79197.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022304|gb|EDL79198.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|149022305|gb|EDL79199.1| rCG27231, isoform CRA_a [Rattus norvegicus]
gi|187957410|gb|AAI58039.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|187957412|gb|AAI57920.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
Length = 357
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 65 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 124
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 125 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 75 LEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIE 133
+E P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 134 FNDYDVVD 141
++ + VD
Sbjct: 61 YSCVEEVD 68
>gi|148695240|gb|EDL27187.1| mCG1305, isoform CRA_a [Mus musculus]
Length = 351
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 65 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 124
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 125 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 75 LEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIE 133
+E P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 134 FNDYDVVD 141
++ + VD
Sbjct: 61 YSCVEEVD 68
>gi|397489099|ref|XP_003815574.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Pan paniscus]
gi|426337838|ref|XP_004032902.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 2
[Gorilla gorilla gorilla]
gi|119631468|gb|EAX11063.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_a [Homo
sapiens]
gi|119631470|gb|EAX11065.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_a [Homo
sapiens]
gi|194375464|dbj|BAG56677.1| unnamed protein product [Homo sapiens]
gi|221046256|dbj|BAH14805.1| unnamed protein product [Homo sapiens]
Length = 356
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 65 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 124
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 125 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 75 LEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIE 133
+E P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 134 FNDYDVVD 141
++ + VD
Sbjct: 61 YSCVEEVD 68
>gi|197098694|ref|NP_001125266.1| heterogeneous nuclear ribonucleoprotein A3 [Pongo abelii]
gi|55727504|emb|CAH90507.1| hypothetical protein [Pongo abelii]
Length = 355
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 65 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 124
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 125 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 75 LEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIE 133
+E P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 134 FNDYDVVD 141
++ + VD
Sbjct: 61 YSCVEEVD 68
>gi|126347016|ref|XP_001368514.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like, partial
[Monodelphis domestica]
Length = 356
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 63 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 122
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 123 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 159
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 4 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 63
Query: 139 VVD 141
VD
Sbjct: 64 EVD 66
>gi|355750652|gb|EHH54979.1| hypothetical protein EGM_04098, partial [Macaca fascicularis]
Length = 326
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 65 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 124
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 125 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 6 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 65
Query: 139 VVD 141
VD
Sbjct: 66 EVD 68
>gi|119603185|gb|EAW82779.1| hCG2025340, isoform CRA_a [Homo sapiens]
Length = 250
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 53/66 (80%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+A+ TVKK+FVGG+K D EE LR+YF Q+G IE + ++T++ +G KRGFAF+ F+D+
Sbjct: 26 RPDAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDH 85
Query: 138 DVVDKI 143
D VDKI
Sbjct: 86 DSVDKI 91
>gi|119936162|gb|ABM06082.1| heterogeneous nuclear ribonucleoprotein A0 [Bos taurus]
gi|440909359|gb|ELR59272.1| Heterogeneous nuclear ribonucleoprotein A0, partial [Bos grunniens
mutus]
Length = 192
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFGT+E ++ +K++G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 IE 167
I
Sbjct: 179 IH 180
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|444721749|gb|ELW62464.1| Heterogeneous nuclear ribonucleoprotein A1-like 2 [Tupaia
chinensis]
Length = 156
Score = 79.7 bits (195), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A+ TVKK+FVGG+K D EE LR+YF Q+G IE + ++T++ +G KRG AF+ F+D+
Sbjct: 58 RPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDQGSGKKRGLAFVTFDDH 117
Query: 138 DVVDKIRGFAFIEFNDYDV 156
D VDKI + N Y+
Sbjct: 118 DSVDKIVIKKYHTVNGYNC 136
>gi|296192806|ref|XP_002744232.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Callithrix jacchus]
Length = 302
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 66/123 (53%), Gaps = 14/123 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFGT+E ++ +K +G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGTVEKAEIIADKLSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 IEF 168
I F
Sbjct: 179 IHF 181
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|297681162|ref|XP_002818335.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Pongo abelii]
Length = 321
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 66/116 (56%), Gaps = 19/116 (16%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAISREDSQRPGAHLTVKKIFVGGIKKDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDKIVC 162
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDK Y V+ VC
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDK------TVIQKYHTVNGHVC 175
Score = 38.9 bits (89), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + + LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPKQLRKLFIGGLNFETTNESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|355694908|gb|AER99825.1| heteroproteinous nuclear ribonucleoprotein A0 [Mustela putorius
furo]
Length = 295
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFGT+E ++ +K++G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 IE 167
I
Sbjct: 179 IH 180
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|291415465|ref|XP_002723972.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 3
[Oryctolagus cuniculus]
Length = 268
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR++F
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGMKEDTEEHHLRDHF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G +RGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKRRGFAFVTFDDHDSVDKI 162
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|426375631|ref|XP_004054631.1| PREDICTED: uncharacterized protein LOC101151151 [Gorilla gorilla
gorilla]
Length = 319
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 55/66 (83%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
KP A+ TVKK+FVGG+K D EE +LR+YF ++G IE++ ++ ++++G KRGFAF+ F+D+
Sbjct: 58 KPVAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDH 117
Query: 138 DVVDKI 143
D++DKI
Sbjct: 118 DIIDKI 123
>gi|47228652|emb|CAG07384.1| unnamed protein product [Tetraodon nigroviridis]
Length = 323
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/99 (40%), Positives = 64/99 (64%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S +EVD+ + PH + + + +P A+ TVKK+FVGG+K D EE +R+
Sbjct: 63 SVDEVDLAMGARPHKVDGRVVEPKRAVSREDSNRPGAHVTVKKIFVGGIKEDTEESHIRD 122
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF +FG IE ++++ ++ +G KRGFAF+ F+D+D VD+I
Sbjct: 123 YFERFGKIEIIDIIADRNSGKKRGFAFVTFDDHDPVDRI 161
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P ++K+F+GGL + D+ LR +F Q+GT+ ++ + + RGF F+ ++ D
Sbjct: 6 PREPEQLRKLFIGGLSFETTDESLRAHFEQWGTLTDCVVMRDPSSKRSRGFGFVTYSSVD 65
Query: 139 VVD 141
VD
Sbjct: 66 EVD 68
>gi|395843943|ref|XP_003794730.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Otolemur garnettii]
Length = 251
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 87 EEVDAAMCALPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 146
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 147 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 45/85 (52%), Gaps = 9/85 (10%)
Query: 66 IPGPPHMDKLEIGK--------PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVN 116
+PG P D + P+ ++K+F+GGL + DD LRE+F ++GT+
Sbjct: 6 LPGRPQPDSGRRRRRRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCV 65
Query: 117 MVTNKETGAKRGFAFIEFNDYDVVD 141
++ + +T RGF F+ ++ + VD
Sbjct: 66 VMRDPQTKRSRGFGFVTYSCVEEVD 90
>gi|349804307|gb|AEQ17626.1| putative heterogeneous nuclear ribonucleoprotein A3 [Hymenochirus
curtipes]
Length = 249
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMTARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 126 EGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 162
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F Q+G + ++ + +T RGF F+ ++ +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|148673673|gb|EDL05620.1| mCG50656 [Mus musculus]
Length = 271
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 87 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 146
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 147 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 139 VVD 141
VD
Sbjct: 88 EVD 90
>gi|431892627|gb|ELK03060.1| Heterogeneous nuclear ribonucleoprotein A0 [Pteropus alecto]
Length = 307
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFGT+E ++ +K++G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 IE 167
I
Sbjct: 179 IH 180
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|426360040|ref|XP_004047259.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Gorilla gorilla gorilla]
Length = 296
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 63/98 (64%), Gaps = 13/98 (13%)
Query: 59 EEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREY 105
+EE+D + PH + + + +P A+ TVKK+FVGG+K D EE LR+Y
Sbjct: 41 KEELDAAMNARPHKVDGRVVEPKRAISREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDY 100
Query: 106 FSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
F Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 101 FEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 138
>gi|73970814|ref|XP_538645.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 isoform 1
[Canis lupus familiaris]
Length = 310
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFGT+E ++ +K++G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 IE 167
I
Sbjct: 179 IH 180
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|344264962|ref|XP_003404558.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Loxodonta africana]
Length = 307
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFGT+E ++ +K++G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 IE 167
I
Sbjct: 179 IH 180
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|311250199|ref|XP_003124018.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Sus
scrofa]
Length = 302
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFGT+E ++ +K++G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 IE 167
I
Sbjct: 179 IH 180
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|119895504|ref|XP_593096.3| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Bos taurus]
gi|297477251|ref|XP_002689241.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Bos taurus]
gi|296485329|tpg|DAA27444.1| TPA: heterogeneous nuclear ribonucleoprotein A0 [Bos taurus]
Length = 305
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFGT+E ++ +K++G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 IE 167
I
Sbjct: 179 IH 180
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|383416553|gb|AFH31490.1| heterogeneous nuclear ribonucleoprotein A3 [Macaca mulatta]
Length = 272
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 87 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 146
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 147 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 139 VVD 141
VD
Sbjct: 88 EVD 90
>gi|351709863|gb|EHB12782.1| Heterogeneous nuclear ribonucleoprotein A3 [Heterocephalus glaber]
Length = 392
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 151 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 210
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 211 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 247
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 92 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 151
Query: 139 VVD 141
VD
Sbjct: 152 EVD 154
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFDFVTYS 84
>gi|444725879|gb|ELW66430.1| Heterogeneous nuclear ribonucleoprotein A1 [Tupaia chinensis]
Length = 191
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ T+KK+FVGG+K D EE LR+YF
Sbjct: 74 EEVDATMKARPHEVDGRVVEPKRVISREDSQRPGAHLTMKKIFVGGIKEDTEEHHLRDYF 133
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ ++D+D VDKI
Sbjct: 134 EQYGKIEVIKIMTDRGSGKKRGFAFVIYDDHDSVDKI 170
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ + K+F+ GL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 15 PKELEQLWKLFIRGLSFETTDESLRSHFEQWGTLTDCMVMRDPNTKHSRGFGFVTYATVE 74
Query: 139 VVD 141
VD
Sbjct: 75 EVD 77
>gi|291389275|ref|XP_002711073.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 269
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KR FAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRSFAFVTFDDHDSVDKI 162
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|417409570|gb|JAA51284.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 309
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 64 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 123
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFGT+E ++ +K++G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 124 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 183
Query: 166 IE 167
I
Sbjct: 184 IH 185
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 8 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 67
>gi|291401095|ref|XP_002716927.1| PREDICTED: mCG1035404-like isoform 1 [Oryctolagus cuniculus]
Length = 377
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 87 EEVDAAMCARPHKVDGRAVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 146
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 147 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 139 VVD 141
VD
Sbjct: 88 EVD 90
>gi|119607518|gb|EAW87112.1| hCG1984888, isoform CRA_b [Homo sapiens]
Length = 189
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A+ TVKK+FVGG+K D EE LR+YF Q+G IE + +++++ +G KRGFAF+ F+D+
Sbjct: 26 RPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMSDRGSGKKRGFAFVTFDDH 85
Query: 138 DVVDKI 143
D VDKI
Sbjct: 86 DSVDKI 91
>gi|351700354|gb|EHB03273.1| Heterogeneous nuclear ribonucleoprotein A0 [Heterocephalus glaber]
Length = 176
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 57/96 (59%), Gaps = 13/96 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 56 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 115
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
SQFGT+E ++ +K++G KRGF F+ F ++D DK
Sbjct: 116 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADK 151
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Query: 83 NATVKKMFVGGLKDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQ--SGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 59
>gi|291402433|ref|XP_002717572.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 327
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR++F
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|291391798|ref|XP_002712349.1| PREDICTED: mCG1035404-like [Oryctolagus cuniculus]
Length = 378
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 87 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 146
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 147 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 139 VVD 141
VD
Sbjct: 88 EVD 90
>gi|213625123|gb|AAI69881.1| Unknown (protein for MGC:196608) [Xenopus laevis]
Length = 348
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 79 EEVDASMSARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYF 138
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 139 EGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 175
Score = 43.9 bits (102), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F Q+G + ++ + +T RGF F+ ++ +
Sbjct: 20 PKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVE 79
Query: 139 VVD 141
VD
Sbjct: 80 EVD 82
>gi|291389618|ref|XP_002711396.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 327
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR++F
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|291389616|ref|XP_002711395.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 371
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR++F
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|344235610|gb|EGV91713.1| Heterogeneous nuclear ribonucleoprotein A3 [Cricetulus griseus]
Length = 146
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 74/122 (60%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH-MDKLEIG-----------KPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH +D + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 21 EEVDAAMCAQPHKIDGSVVAPKRAVSREGSIKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 80
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
++G IE++ ++ ++++G KRGF F+ F+D+D VDKI ++ N ++ V K + K
Sbjct: 81 EKYGKIETIEVMEDRQSGKKRGFVFVTFDDHDTVDKIVVQKYLTINGHNCEVKKALSKQE 140
Query: 166 IE 167
++
Sbjct: 141 MQ 142
>gi|291384352|ref|XP_002708768.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVLREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + ++ LR +F Q+G + ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFEMTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|147905111|ref|NP_001081320.1| heterogeneous nuclear ribonucleoprotein A3 homolog 2 [Xenopus
laevis]
gi|1710626|sp|P51992.1|RO32_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A3 homolog 2;
AltName: Full=hnRNP A3(B)
gi|214747|gb|AAA49950.1| ribonucleoprotein [Xenopus laevis]
Length = 385
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 79 EEVDASMSARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYF 138
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 139 EGYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 175
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F Q+G + ++ + +T RGF F+ ++ +
Sbjct: 20 PKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVE 79
Query: 139 VVD 141
VD
Sbjct: 80 EVD 82
>gi|380792859|gb|AFE68305.1| heterogeneous nuclear ribonucleoprotein A0, partial [Macaca
mulatta]
Length = 229
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFGT+E ++ +K++G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 I 166
I
Sbjct: 179 I 179
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|344268345|ref|XP_003406021.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Loxodonta africana]
Length = 348
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 147 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 206
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 207 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 243
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 88 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 147
Query: 139 VVD 141
VD
Sbjct: 148 EVD 150
>gi|395817866|ref|XP_003782366.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Otolemur
garnettii]
Length = 238
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFGT+E ++ +K++G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 IE 167
I
Sbjct: 179 IH 180
Score = 42.4 bits (98), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|332826110|ref|XP_003311764.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Pan troglodytes]
Length = 283
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 63/98 (64%), Gaps = 13/98 (13%)
Query: 59 EEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREY 105
+EE+D + PH + + + +P A+ TVKK+FVGG+K D EE LR+Y
Sbjct: 28 KEELDAAMNARPHKVDGRVVEPKRAISREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDY 87
Query: 106 FSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
F Q+G IE + +++++ +G KRGFAF+ F+D+D VDKI
Sbjct: 88 FEQYGKIEVIEIMSDRGSGKKRGFAFVTFDDHDSVDKI 125
>gi|296485784|tpg|DAA27899.1| TPA: heterogeneous nuclear ribonucleoprotein A2/B1-like [Bos
taurus]
Length = 341
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 61/96 (63%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + G+ A+ T+KK+FVGG+K D EE LREYF
Sbjct: 74 EVDAAMAARPHSIDGRVLEPRRAIPREASGQRGAHWTLKKLFVGGIKEDTEEHHLREYFE 133
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G I+++ ++T++++G KRGF F+ F+DYD VDKI
Sbjct: 134 KYGKIDAIEIITDRQSGRKRGFGFVTFDDYDPVDKI 169
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 86 VKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
++K+F+GGL Q E+ LR+Y+ Q+G + ++ + + RG F+ F+ VD
Sbjct: 20 IRKLFIGGLSFQTTEESLRKYYQQWGELTDCVVLRDFASQRSRGCGFVTFSSVTEVD 76
>gi|426231021|ref|XP_004009550.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Ovis aries]
Length = 302
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFGT+E ++ +K++G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 IE 167
I
Sbjct: 179 IH 180
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|426350099|ref|XP_004042619.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0, partial
[Gorilla gorilla gorilla]
Length = 191
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFGT+E ++ +K++G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 I 166
I
Sbjct: 179 I 179
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|291402431|ref|XP_002717571.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 371
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR++F
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDHF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|440912092|gb|ELR61691.1| hypothetical protein M91_00743 [Bos grunniens mutus]
Length = 266
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A+ TVKK+FVGG+K D EE LR+YF Q+G IE + ++T++ +G KRGFAF+ F+D+
Sbjct: 96 RPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDH 155
Query: 138 DVVDKI 143
D VDKI
Sbjct: 156 DSVDKI 161
>gi|297264391|ref|XP_001096533.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
3 [Macaca mulatta]
Length = 336
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 87 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 146
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 147 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 139 VVD 141
VD
Sbjct: 88 EVD 90
>gi|355691634|gb|EHH26819.1| hypothetical protein EGK_16888 [Macaca mulatta]
Length = 303
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFGT+E ++ +K++G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 I 166
I
Sbjct: 179 I 179
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|339233086|ref|XP_003381660.1| heterogeneous nuclear ribonucleoprotein A1 [Trichinella spiralis]
gi|316979494|gb|EFV62286.1| heterogeneous nuclear ribonucleoprotein A1 [Trichinella spiralis]
Length = 322
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 63/97 (64%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLKDQE-EDDLREYF 106
E+V+ + PH M K + KPEA+ +VKK+++ G+KD+ ED LREYF
Sbjct: 79 EQVNAAMAARPHLIDGKEVEPKRAMPKDVMNKPEAHISVKKVYISGIKDEHTEDMLREYF 138
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G+++ V++ ++ TG KRGFAF+ F+DYD VD++
Sbjct: 139 MQYGSVQEVDIKVDQGTGKKRGFAFVTFDDYDPVDRV 175
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
PE + +K+F+GG+ + ++DLR ++S++G I V ++ + + RGF F+ + D +
Sbjct: 20 PEKDEQNRKIFIGGITVNTSDEDLRTFYSKWGEITDVVVMRDPVSKRSRGFGFVTYADPE 79
Query: 139 VVD 141
V+
Sbjct: 80 QVN 82
>gi|403258685|ref|XP_003921883.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Saimiri
boliviensis boliviensis]
Length = 378
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 87 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 146
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 147 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 139 VVD 141
VD
Sbjct: 88 EVD 90
>gi|296220327|ref|XP_002756261.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Callithrix jacchus]
Length = 304
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 87 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 146
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 147 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 139 VVD 141
VD
Sbjct: 88 EVD 90
>gi|38328278|gb|AAH62198.1| Hnrpa3 protein [Mus musculus]
Length = 318
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 87 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 146
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 147 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 139 VVD 141
VD
Sbjct: 88 EVD 90
>gi|32879847|gb|AAP88754.1| heterogeneous nuclear ribonucleoprotein A0 [synthetic construct]
gi|60653987|gb|AAX29686.1| heterogeneous nuclear ribonucleoprotein A0 [synthetic construct]
Length = 306
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFGT+E ++ +K++G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 I 166
I
Sbjct: 179 I 179
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|109098438|ref|XP_001091114.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 3 [Macaca mulatta]
gi|109098440|ref|XP_001091244.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 4 [Macaca mulatta]
gi|297263360|ref|XP_002798798.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Macaca mulatta]
Length = 320
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKTAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDK
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKT 162
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ + + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVAMRDPNTKRSRGFRFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|410948433|ref|XP_003980944.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Felis catus]
Length = 250
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFGT+E ++ +K++G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 IE 167
I
Sbjct: 179 IH 180
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|1911429|gb|AAB50657.1| A0=heterogeneous nuclear ribonucleoprotein [human, placenta,
Peptide, 305 aa]
Length = 305
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFGT+E ++ +K++G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 I 166
I
Sbjct: 179 I 179
Score = 42.0 bits (97), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFETFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|114601869|ref|XP_001169959.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Pan
troglodytes]
gi|397518219|ref|XP_003829292.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Pan
paniscus]
gi|410211572|gb|JAA03005.1| heterogeneous nuclear ribonucleoprotein A0 [Pan troglodytes]
gi|410249756|gb|JAA12845.1| heterogeneous nuclear ribonucleoprotein A0 [Pan troglodytes]
gi|410295930|gb|JAA26565.1| heterogeneous nuclear ribonucleoprotein A0 [Pan troglodytes]
gi|410346956|gb|JAA40716.1| heterogeneous nuclear ribonucleoprotein A0 [Pan troglodytes]
Length = 306
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFGT+E ++ +K++G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 I 166
I
Sbjct: 179 I 179
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|388453863|ref|NP_001253568.1| heterogeneous nuclear ribonucleoprotein A0 [Macaca mulatta]
gi|384944966|gb|AFI36088.1| heterogeneous nuclear ribonucleoprotein A0 [Macaca mulatta]
Length = 303
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFGT+E ++ +K++G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 I 166
I
Sbjct: 179 I 179
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|5803036|ref|NP_006796.1| heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|297676052|ref|XP_002815964.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Pongo
abelii]
gi|8134660|sp|Q13151.1|ROA0_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A0;
Short=hnRNP A0
gi|773644|gb|AAA65094.1| heterogeneous ribonucleoprotein A0 [Homo sapiens]
gi|12654371|gb|AAH01008.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|13938287|gb|AAH07271.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|14424524|gb|AAH09284.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|15080451|gb|AAH11972.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|15278047|gb|AAH12980.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|17511973|gb|AAH18949.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|17939453|gb|AAH19271.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|20810403|gb|AAH28976.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|20987729|gb|AAH30249.1| Heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|48146089|emb|CAG33267.1| HNRPA0 [Homo sapiens]
gi|119582586|gb|EAW62182.1| heterogeneous nuclear ribonucleoprotein A0 [Homo sapiens]
gi|261861132|dbj|BAI47088.1| heterogeneous nuclear ribonucleoprotein A0 [synthetic construct]
Length = 305
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFGT+E ++ +K++G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 I 166
I
Sbjct: 179 I 179
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|387539574|gb|AFJ70414.1| heterogeneous nuclear ribonucleoprotein A3 [Macaca mulatta]
Length = 378
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 87 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 146
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 147 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 139 VVD 141
VD
Sbjct: 88 EVD 90
>gi|296216773|ref|XP_002754712.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Callithrix jacchus]
Length = 320
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A+ TVKK+F+GG+K D EE LR+YF Q+G IE + ++T++ +G KRGFAF+ F+D+
Sbjct: 97 RPGAHLTVKKIFIGGIKEDTEEHHLRDYFEQYGKIEMIEIMTDRGSGKKRGFAFVTFDDH 156
Query: 138 DVVDKI 143
D VDKI
Sbjct: 157 DSVDKI 162
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVRYAAVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|148707568|gb|EDL39515.1| mCG1047313 [Mus musculus]
Length = 316
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
KP A+ TVKK+FVGG+K D EE +LR+YF ++G IE++ ++ ++++G KRGFAF+ F+D+
Sbjct: 96 KPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDH 155
Query: 138 DVVDKI 143
D VDKI
Sbjct: 156 DTVDKI 161
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 75 LEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIE 133
+E P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 134 FN 135
++
Sbjct: 61 YS 62
>gi|296490667|tpg|DAA32780.1| TPA: mCG1035404-like [Bos taurus]
Length = 380
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 87 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 146
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 147 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 48/90 (53%), Gaps = 12/90 (13%)
Query: 64 MEIPGPPHMDKLEIGK-----------PEANATVKKMFVGGLKDQEEDD-LREYFSQFGT 111
ME+ PP + + G+ P+ ++K+F+GGL + DD LRE+F ++GT
Sbjct: 1 MEVKPPPGRPQPDSGRRRRRRGAEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGT 60
Query: 112 IESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+ ++ + +T RGF F+ ++ + VD
Sbjct: 61 LTDCVVMRDPQTKRSRGFGFVTYSCVEEVD 90
>gi|74004684|ref|XP_543761.2| PREDICTED: uncharacterized protein LOC608074 isoform 2 [Canis lupus
familiaris]
gi|410968904|ref|XP_003990939.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Felis catus]
Length = 378
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 87 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 146
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 147 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 139 VVD 141
VD
Sbjct: 88 EVD 90
>gi|74228812|dbj|BAE21894.1| unnamed protein product [Mus musculus]
Length = 379
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 87 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 146
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 147 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 139 VVD 141
VD
Sbjct: 88 EVD 90
>gi|34740329|ref|NP_919223.1| heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|397489097|ref|XP_003815573.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Pan paniscus]
gi|426337836|ref|XP_004032901.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 isoform 1
[Gorilla gorilla gorilla]
gi|51338779|sp|P51991.2|ROA3_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|34327775|gb|AAQ63629.1| heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|62822160|gb|AAY14709.1| unknown [Homo sapiens]
gi|85567495|gb|AAI12028.1| Heterogeneous nuclear ribonucleoprotein A3 [Homo sapiens]
gi|109730489|gb|AAI13471.1| HNRPA3 protein [Homo sapiens]
gi|119631469|gb|EAX11064.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_b [Homo
sapiens]
gi|119631471|gb|EAX11066.1| heterogeneous nuclear ribonucleoprotein A3, isoform CRA_b [Homo
sapiens]
gi|410261478|gb|JAA18705.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261480|gb|JAA18706.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261482|gb|JAA18707.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261484|gb|JAA18708.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261486|gb|JAA18709.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261488|gb|JAA18710.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261490|gb|JAA18711.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261492|gb|JAA18712.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410261494|gb|JAA18713.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410351651|gb|JAA42429.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
gi|410351653|gb|JAA42430.1| heterogeneous nuclear ribonucleoprotein A3 [Pan troglodytes]
Length = 378
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 87 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 146
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 147 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 139 VVD 141
VD
Sbjct: 88 EVD 90
>gi|402888739|ref|XP_003907708.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Papio
anubis]
Length = 378
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 87 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 146
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 147 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 139 VVD 141
VD
Sbjct: 88 EVD 90
>gi|332209432|ref|XP_003253815.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Nomascus leucogenys]
Length = 378
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 87 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 146
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 147 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 139 VVD 141
VD
Sbjct: 88 EVD 90
>gi|329664164|ref|NP_001192358.1| heterogeneous nuclear ribonucleoprotein A3 [Bos taurus]
gi|426220819|ref|XP_004004609.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 [Ovis aries]
Length = 380
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 87 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 146
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 147 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 139 VVD 141
VD
Sbjct: 88 EVD 90
>gi|31559916|ref|NP_666242.2| heterogeneous nuclear ribonucleoprotein A3 isoform a [Mus musculus]
gi|37674277|ref|NP_932758.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Mus musculus]
gi|37693507|ref|NP_937765.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Rattus
norvegicus]
gi|162329577|ref|NP_001104764.1| heterogeneous nuclear ribonucleoprotein A3 isoform a [Rattus
norvegicus]
gi|311272700|ref|XP_003133549.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
1 [Sus scrofa]
gi|30316201|sp|Q8BG05.1|ROA3_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|51316556|sp|Q6URK4.1|ROA3_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein A3;
Short=hnRNP A3
gi|23274033|gb|AAH23908.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|23468331|gb|AAH38364.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|34327777|gb|AAQ63630.1| heterogeneous nuclear ribonucleoprotein A3 variant a [Rattus
norvegicus]
gi|40787633|gb|AAH64824.1| Heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|51980308|gb|AAH81878.1| Heterogeneous nuclear ribonucleoprotein A3 [Rattus norvegicus]
gi|58801248|dbj|BAD89508.1| heterogeneous nuclear ribonucleoprotein A3 [Mus musculus]
gi|74143970|dbj|BAE41285.1| unnamed protein product [Mus musculus]
gi|148695241|gb|EDL27188.1| mCG1305, isoform CRA_b [Mus musculus]
gi|149022310|gb|EDL79204.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022311|gb|EDL79205.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022312|gb|EDL79206.1| rCG27231, isoform CRA_c [Rattus norvegicus]
gi|149022313|gb|EDL79207.1| rCG27231, isoform CRA_c [Rattus norvegicus]
Length = 379
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 87 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 146
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 147 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 183
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 139 VVD 141
VD
Sbjct: 88 EVD 90
>gi|444518257|gb|ELV12059.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Tupaia chinensis]
Length = 230
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 61/89 (68%), Gaps = 2/89 (2%)
Query: 56 AQSEEEVDMEIPGPPH-MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIE 113
A +D + P H + + E GKP A+ TVKK+FVGG+K D EE LR+YF ++G I+
Sbjct: 9 AARSHSIDGRVIEPKHAVVREESGKPGAHVTVKKLFVGGIKEDTEEHHLRDYFEEYGKID 68
Query: 114 SVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
++ ++T++++G KRGF + F+D+D VDK
Sbjct: 69 TIEIITDRQSGKKRGFCCVPFDDHDPVDK 97
>gi|113673508|ref|NP_001038904.1| heterogeneous nuclear ribonucleoprotein A3 [Danio rerio]
gi|112418968|gb|AAI22384.1| Heterogeneous nuclear ribonucleoprotein A3 [Danio rerio]
Length = 234
Score = 79.3 bits (194), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 73/144 (50%), Gaps = 17/144 (11%)
Query: 17 GGWWFESKCPSHEVRLAVEAGVLEVVTTRPTINNKA----MEEAQSEEEVDMEIPGPPH- 71
GG FE+ S + + V R N ++ S EVD + PH
Sbjct: 18 GGLSFETTEDSLRAHFEQWGKLTDCVVMRDPANKRSRGFGFVTYSSVSEVDAAMTARPHK 77
Query: 72 -----------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVT 119
+ + + KP A+ TVKK+FVGG+K D EE +REYF +G IE+++++
Sbjct: 78 VDGRVVEPKRAVSREDSNKPGAHLTVKKIFVGGIKEDTEEYHIREYFECYGKIETIDIME 137
Query: 120 NKETGAKRGFAFIEFNDYDVVDKI 143
+ TG KRGF F+ F+D+D VDKI
Sbjct: 138 ERSTGKKRGFCFVTFDDHDTVDKI 161
>gi|209155454|gb|ACI33959.1| Heterogeneous nuclear ribonucleoprotein A0 [Salmo salar]
Length = 299
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 76 EIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
+ G+PEA A VKK+F+GGLKD EDD L +YFSQFG IE ++++K+T KRGF F+ F
Sbjct: 86 DAGRPEALAKVKKIFIGGLKDDIEDDHLNDYFSQFGAIEKAEVISDKQTLKKRGFGFVYF 145
Query: 135 NDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYNIE 167
D D DK F N + V V K + K ++
Sbjct: 146 EDNDSADKAVVLKFHTINGHKVEVKKALTKQEMQ 179
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 88 KMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
K+FVGGL + DD LR++F Q+G + +V N++ R F F+ ++
Sbjct: 7 KLFVGGLNVETTDDGLRQHFEQYGQLTDCVVVQNQQLQRSRCFGFVTYS 55
>gi|350580575|ref|XP_003480852.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like [Sus
scrofa]
Length = 349
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 61/96 (63%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + E KP A+ VKK+FVGG+K D EE LR+YF
Sbjct: 74 EVDAAMAARPHSVDGKVVDPKRAVAREESEKPGAHLAVKKLFVGGIKEDTEEHHLRDYFE 133
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G I+++ ++T++++G KRGF F+ F+D+D VDKI
Sbjct: 134 KYGKIDTIEIITDRQSGKKRGFGFVTFDDHDPVDKI 169
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 1/64 (1%)
Query: 79 KPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
K N K+F+GGL + E LR Y+ Q+G + ++ + RGF F+ F+
Sbjct: 13 KKRINEQFHKLFIGGLCSRTTEKSLRNYYQQWGKLTDCVVLRDPSNKRSRGFGFVTFSSV 72
Query: 138 DVVD 141
VD
Sbjct: 73 AEVD 76
>gi|426254471|ref|XP_004020902.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Ovis
aries]
Length = 320
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A+ TVKK+FVGG+K D EE LR+YF Q+G IE + ++T++ +G KRGFAF+ F+D+
Sbjct: 97 RPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDH 156
Query: 138 DVVDKI 143
D VDKI
Sbjct: 157 DSVDKI 162
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKCSRGFGFVTY 62
>gi|291415461|ref|XP_002723970.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 371
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR++F
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGMKEDTEEHHLRDHF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G +RGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKRRGFAFVTFDDHDSVDKI 162
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|403283527|ref|XP_003933170.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Saimiri boliviensis boliviensis]
Length = 299
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 62/99 (62%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
+ EEVD + PH + + + +P A+ TVKK+F+GG+K D EE LR+
Sbjct: 64 TAEEVDAAMNARPHKVHGRVVEPKRAVSREDSQRPGAHLTVKKIFLGGIKEDTEEHHLRD 123
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF Q+G IE + ++T++ +G KRGFAF+ F+D+D VD I
Sbjct: 124 YFEQYGKIEVIEIITDRGSGKKRGFAFVAFDDHDSVDMI 162
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 5/72 (6%)
Query: 72 MDKLEIGK-PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGF 129
M K E K PE ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF
Sbjct: 1 MSKSESSKEPE---QLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGF 57
Query: 130 AFIEFNDYDVVD 141
FI + + VD
Sbjct: 58 GFIRYATAEEVD 69
>gi|291415463|ref|XP_002723971.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 327
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR++F
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGMKEDTEEHHLRDHF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G +RGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKRRGFAFVTFDDHDSVDKI 162
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|402872594|ref|XP_003900193.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Papio
anubis]
Length = 303
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFGT+E ++ +K++G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 I 166
I
Sbjct: 179 I 179
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|332234557|ref|XP_003266473.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Nomascus
leucogenys]
Length = 306
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 66/121 (54%), Gaps = 14/121 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFGT+E ++ +K++G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGTVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 I 166
I
Sbjct: 179 I 179
Score = 42.0 bits (97), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|297676076|ref|XP_002815972.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Pongo abelii]
Length = 320
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P+A+ TVKK+FVGG+K D EE LR YF
Sbjct: 66 EEVDTAMNARPHKVDGRVVEPNRAVSREDSQRPDAHLTVKKIFVGGIKEDTEEHHLRHYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D +DK
Sbjct: 126 EQYGKIEVIEIMTDQGSGKKRGFAFVTFDDHDSLDKT 162
>gi|402887374|ref|XP_003907069.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Papio anubis]
gi|402887376|ref|XP_003907070.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Papio anubis]
Length = 320
Score = 79.0 bits (193), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 61/97 (62%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKTAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVNEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 38.9 bits (89), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPKQLRKLFIGGLSFETIDESLRSHFEQWGTLMDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|426341485|ref|XP_004036065.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
1 [Gorilla gorilla gorilla]
Length = 320
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDK
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKT 162
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+G + ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGMLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|187956922|gb|AAI58075.1| EG627828 protein [Mus musculus]
gi|187956950|gb|AAI57905.1| EG627828 protein [Mus musculus]
gi|219521461|gb|AAI72011.1| EG627828 protein [Mus musculus]
Length = 351
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
KP A+ TVKK+FVGG+K D EE +LR+YF ++G IE++ ++ ++++G KRGFAF+ F+D+
Sbjct: 96 KPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDH 155
Query: 138 DVVDKI 143
D VDKI
Sbjct: 156 DTVDKI 161
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 75 LEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIE 133
+E P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+
Sbjct: 1 MEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 134 FNDYDVVD 141
++ + VD
Sbjct: 61 YSCVEEVD 68
>gi|344284648|ref|XP_003414077.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like
[Loxodonta africana]
Length = 372
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 60/97 (61%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRHYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGF F+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDQGSGKKRGFVFVTFDDHDSVDKI 162
Score = 41.6 bits (96), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ ++ +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYSTVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|213513508|ref|NP_001134615.1| Heterogeneous nuclear ribonucleoprotein A3 homolog 2 [Salmo salar]
gi|209734656|gb|ACI68197.1| Heterogeneous nuclear ribonucleoprotein A3 homolog 2 [Salmo salar]
Length = 339
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 83/169 (49%), Gaps = 18/169 (10%)
Query: 17 GGWWFESKCPSHEVRLAVEAGVLEVVTTRPTINNKAME----EAQSEEEVDMEIPGPPH- 71
GG FE+ S + + + V R N ++ EEVD + PH
Sbjct: 18 GGLSFETTEESLRIHFEQWGNLTDSVVMRDPNNKRSRGFGFVTYSCVEEVDACMAARPHK 77
Query: 72 -----------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVT 119
+ + + +P A+ TVKK+FVGG+K D ED +REYF +G IE+++++
Sbjct: 78 VDGRVVEPKRAVSREDSNRPGAHLTVKKIFVGGIKEDTREDHIREYFETYGRIETIDIME 137
Query: 120 NKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYNIE 167
+ TG KRGF F+ F+D D VDKI + N ++ V K + K +E
Sbjct: 138 ERATGKKRGFCFVSFDDNDTVDKIVAQKYHTINSHNCEVRKALPKQEME 186
Score = 35.8 bits (81), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 72 MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFA 130
M+ E +PE ++K+F+GGL + E+ LR +F Q+G + ++ + RGF
Sbjct: 1 MEGHEAREPEQ---LRKLFIGGLSFETTEESLRIHFEQWGNLTDSVVMRDPNNKRSRGFG 57
Query: 131 FIEFNDYDVVD 141
F+ ++ + VD
Sbjct: 58 FVTYSCVEEVD 68
>gi|444718951|gb|ELW59754.1| Lon protease like protein 2, peroxisomal [Tupaia chinensis]
Length = 1016
Score = 79.0 bits (193), Expect = 7e-13, Method: Composition-based stats.
Identities = 35/66 (53%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A+ TVKK+FVGG+K D EE LR+YF ++G IE + ++T+ +G KRGFAF+ F+D+
Sbjct: 26 RPGAHLTVKKIFVGGIKEDTEEHHLRDYFERYGKIEVIEIMTDCGSGKKRGFAFVTFDDH 85
Query: 138 DVVDKI 143
D VDK+
Sbjct: 86 DSVDKV 91
>gi|351697839|gb|EHB00758.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Heterocephalus glaber]
Length = 236
Score = 79.0 bits (193), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A+ TVKK+FVGG+K D EE LR+YF Q G IE + ++T++ +G KRGFAF+ F+D+
Sbjct: 97 RPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQCGKIEVIEIITDRGSGKKRGFAFVTFDDH 156
Query: 138 DVVDKI 143
D VDKI
Sbjct: 157 DSVDKI 162
Score = 35.4 bits (80), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ + ++K+F+ GL + D+ LR F Q+G + ++ + T RGF F+ + +
Sbjct: 7 PKESEQLRKLFIQGLSFETTDESLRSCFEQWGMLMDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|62027493|gb|AAH92083.1| Hnrpa3 protein, partial [Mus musculus]
Length = 263
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 54/66 (81%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
KP A+ TVKK+FVGG+K D EE +LR+YF ++G IE++ ++ ++++G KRGFAF+ F+D+
Sbjct: 2 KPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDH 61
Query: 138 DVVDKI 143
D VDKI
Sbjct: 62 DTVDKI 67
>gi|328909069|gb|AEB61202.1| heterogeneous nuclear ribonucleoprotein a1-like protein, partial
[Equus caballus]
Length = 235
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A+ TVKK+FVGG+K D EE LR+YF Q+G IE + ++T++ +G KRGFAF+ F+D+
Sbjct: 12 RPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDH 71
Query: 138 DVVDKI 143
D VDKI
Sbjct: 72 DSVDKI 77
>gi|403283529|ref|XP_003933171.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Saimiri boliviensis boliviensis]
Length = 254
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 62/99 (62%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
+ EEVD + PH + + + +P A+ TVKK+F+GG+K D EE LR+
Sbjct: 19 TAEEVDAAMNARPHKVHGRVVEPKRAVSREDSQRPGAHLTVKKIFLGGIKEDTEEHHLRD 78
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF Q+G IE + ++T++ +G KRGFAF+ F+D+D VD I
Sbjct: 79 YFEQYGKIEVIEIITDRGSGKKRGFAFVAFDDHDSVDMI 117
>gi|444509175|gb|ELV09196.1| Heterogeneous nuclear ribonucleoprotein A1 [Tupaia chinensis]
Length = 346
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TV+K+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVEKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFKTFDDHDSVDKI 162
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
P+ ++K+F+GGL + D+ LR +F Q GT+ ++ + T RGF F+
Sbjct: 7 PKELEQLRKLFIGGLSFETTDESLRSHFEQRGTLTDCVVMRDPNTKHSRGFGFV 60
>gi|296190480|ref|XP_002743214.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like isoform
2 [Callithrix jacchus]
Length = 320
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+F GG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFAGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D +DKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSMDKI 162
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|392334561|ref|XP_003753212.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Rattus
norvegicus]
Length = 356
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 63/97 (64%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 65 EEVDAAMCARPHKVDGRVVEPKRAVSREDSLKPGAHLTVKKIFVGGIKEDTEEYYLRDYF 124
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 125 EKYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 161
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 75 LEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIE 133
+E P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+
Sbjct: 1 MEGHDPKELEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVT 60
Query: 134 FNDYDVVD 141
++ + VD
Sbjct: 61 YSCVEEVD 68
>gi|444723753|gb|ELW64388.1| Heterogeneous nuclear ribonucleoprotein A3 [Tupaia chinensis]
Length = 348
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/66 (56%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
KP A TVKK+FVGG+K D EE +LR+YF +FG IE++ + ++++G KRGFAF+ F+D+
Sbjct: 118 KPGACLTVKKIFVGGIKEDIEEYNLRDYFEKFGKIETIEVTKDRQSGKKRGFAFVTFDDH 177
Query: 138 DVVDKI 143
D VDKI
Sbjct: 178 DTVDKI 183
>gi|291389273|ref|XP_002711072.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KR FAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRSFAFVTFDDHDSVDKI 162
Score = 40.0 bits (92), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|118097545|ref|XP_414620.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Gallus
gallus]
Length = 307
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 66/122 (54%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + KP A+A VKK+FVGGLK D E DL ++F
Sbjct: 59 EEADAAMAASPHAVDGNSVELKRAVSREDSAKPGAHAKVKKLFVGGLKGDVGEGDLVQHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFG +E ++ +K++G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGPVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 IE 167
I+
Sbjct: 179 IQ 180
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LRE+F+ +GT+ +V N +T R F F+ ++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTTEAGLREHFAAYGTLTDCVVVLNPQTKRSRCFGFVTYSAVEEAD 62
>gi|348519655|ref|XP_003447345.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Oreochromis niloticus]
Length = 335
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 68/114 (59%), Gaps = 15/114 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
S EVD + PH + + + KP A+ TVKK+FVGG+K D EE +RE
Sbjct: 63 SVREVDDAMKARPHKVDGRVVEPKRAVSREDSNKPGAHLTVKKIFVGGIKEDTEEYHIRE 122
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI--RGFAFIEFNDYDV 156
YF ++G IE ++++ + TG KRGF F+ F+D+D VDKI + F I F++ +V
Sbjct: 123 YFEKYGKIECIDIMEERSTGKKRGFCFVTFDDHDTVDKIVAQKFHTINFHNCEV 176
Score = 38.5 bits (88), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 86 VKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
++K+F+GGL + E+ LR +F Q+GT+ ++ + + RGF F+ ++ VD
Sbjct: 12 LRKLFIGGLSFETTEESLRAHFEQWGTLTDCVVMRDPNSKRSRGFGFVTYSSVREVD 68
>gi|432098521|gb|ELK28236.1| Heterogeneous nuclear ribonucleoprotein A1 [Myotis davidii]
Length = 316
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D E LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEVHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ + ++K+F+GGL + + LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKESEQLRKLFIGGLSFETTNESLRSHFEQWGTLTDYVVLRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|403287876|ref|XP_003935149.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Saimiri boliviensis boliviensis]
Length = 356
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVG +K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVNGRVVEPKRAVSREDSQRPGAHLTVKKIFVGDIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G K+GFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRSSGKKKGFAFVTFDDHDSVDKI 162
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTHKSLRSHFEQWGTLTGCVVMRHPNTKHSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|403296845|ref|XP_003939304.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 [Saimiri
boliviensis boliviensis]
Length = 320
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVG +K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGDIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|209148043|gb|ACI32918.1| Heterogeneous nuclear ribonucleoprotein A0 [Salmo salar]
Length = 300
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 59/94 (62%), Gaps = 2/94 (2%)
Query: 76 EIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
+ G+PEA A VKK+F+GGLKD ED+ L +YFSQFG IE ++++KET KRGF F+ F
Sbjct: 86 DAGRPEALAKVKKIFIGGLKDDIEDEHLNDYFSQFGAIEKAEVISDKETFKKRGFGFVYF 145
Query: 135 NDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYNIE 167
D D DK F N + V V K + K ++
Sbjct: 146 EDNDSADKAVVLKFHTINGHKVEVKKALTKQEMQ 179
Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 88 KMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
K+FVGGL + DD LR++F Q+G + +V N++ R F F+ ++
Sbjct: 7 KLFVGGLNVETTDDGLRQHFEQYGQLTDCVVVQNQQLQRSRCFGFVTYS 55
>gi|94482853|gb|ABF22468.1| heterogeneous nuclear ribonucleoprotein A3 [Takifugu rubripes]
Length = 341
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 60/96 (62%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + + KP A+ +VKK+FVGG+K D EED +R+YF
Sbjct: 71 EVDEAMKARPHKVDGRVVEPKRAVSREDSNKPGAHLSVKKIFVGGIKEDTEEDQIRDYFE 130
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE V+++ + +G KRGF F+ F+D+D VDKI
Sbjct: 131 KYGKIECVDIMEERSSGKKRGFCFVTFDDHDTVDKI 166
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%), Gaps = 4/67 (5%)
Query: 76 EIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
EI +PE ++K+F+GGL + E+ LR +F ++G++ ++ RGF F+ +
Sbjct: 10 EIQEPE---QLRKLFIGGLSFETTEESLRAHFEKWGSLTDCVVMREPACKRSRGFGFVTY 66
Query: 135 NDYDVVD 141
+ VD
Sbjct: 67 SCLREVD 73
>gi|397514507|ref|XP_003827523.1| PREDICTED: uncharacterized protein LOC100981942 [Pan paniscus]
Length = 363
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
Query: 80 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P A+ TVKK+FVGG+K D EE +LR+YF ++G IE++ ++ ++++G KRGFAF+ F+D+D
Sbjct: 103 PVAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFAFVTFDDHD 162
Query: 139 VVDKI 143
++DKI
Sbjct: 163 IIDKI 167
>gi|119607517|gb|EAW87111.1| hCG1984888, isoform CRA_a [Homo sapiens]
Length = 249
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A+ TVKK+FVGG+K D EE LR+YF Q+G IE + +++++ +G KRGFAF+ F+D+
Sbjct: 26 RPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMSDRGSGKKRGFAFVTFDDH 85
Query: 138 DVVDKI 143
D VDKI
Sbjct: 86 DSVDKI 91
>gi|432933127|ref|XP_004081818.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Oryzias latipes]
Length = 340
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 67/111 (60%), Gaps = 15/111 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + + KP A+ TVKK+FVGG+K D EE +REYF
Sbjct: 66 EVDDAMKARPHKVDGRVVEPKRAVSREDSNKPGAHLTVKKIFVGGIKEDTEEYHIREYFE 125
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI--RGFAFIEFNDYDV 156
++G IE ++++ + TG KRGF F+ F+D+D VDKI + + I F++ +V
Sbjct: 126 KYGKIECIDIMEERSTGKKRGFCFVTFDDHDTVDKIVAQKYHIINFHNCEV 176
Score = 38.9 bits (89), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 41/71 (57%), Gaps = 4/71 (5%)
Query: 72 MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFA 130
M+ + +PE ++K+F+GGL + E+ LR +F Q+G++ ++ + + RGF
Sbjct: 1 MENRDAKEPEQ---LRKLFIGGLSFETTEESLRAHFEQWGSLTDCVVMRDPNSKRSRGFG 57
Query: 131 FIEFNDYDVVD 141
F+ +++ VD
Sbjct: 58 FVTYSNVTEVD 68
>gi|410896922|ref|XP_003961948.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3 homolog
2-like [Takifugu rubripes]
Length = 336
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 60/96 (62%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + + KP A+ +VKK+FVGG+K D EED +R+YF
Sbjct: 66 EVDEAMKARPHKVDGRVVEPKRAVSREDSNKPGAHLSVKKIFVGGIKEDTEEDQIRDYFE 125
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE V+++ + +G KRGF F+ F+D+D VDKI
Sbjct: 126 KYGKIECVDIMEERSSGKKRGFCFVTFDDHDTVDKI 161
Score = 37.0 bits (84), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 39/71 (54%), Gaps = 4/71 (5%)
Query: 72 MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFA 130
M+ E+ +PE ++K+F+GGL + E+ LR +F ++G++ ++ RGF
Sbjct: 1 MEDRELREPE---QLRKLFIGGLSFETTEESLRAHFEKWGSLTDCVVMREPACKRSRGFG 57
Query: 131 FIEFNDYDVVD 141
F+ ++ VD
Sbjct: 58 FVTYSCLREVD 68
>gi|348575081|ref|XP_003473318.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Cavia
porcellus]
Length = 301
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 65/122 (53%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFG +E ++ +K++G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGAVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 IE 167
I
Sbjct: 179 IH 180
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|444728472|gb|ELW68929.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Tupaia chinensis]
Length = 133
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/69 (49%), Positives = 54/69 (78%), Gaps = 1/69 (1%)
Query: 76 EIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
E KP A+ TVKK+FVGG+K D E+ LR+YF ++G I+++ ++T++++G KRGF F+ F
Sbjct: 13 EFEKPGAHVTVKKLFVGGIKEDAEKHHLRDYFEEYGKIDTIEIITDRQSGKKRGFGFVNF 72
Query: 135 NDYDVVDKI 143
+D+D +DKI
Sbjct: 73 DDHDPMDKI 81
>gi|291387384|ref|XP_002710273.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0 [Oryctolagus
cuniculus]
Length = 298
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 65/122 (53%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFG +E ++ +K++G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGAVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 IE 167
I
Sbjct: 179 IH 180
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|297269736|ref|XP_002799946.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Macaca mulatta]
Length = 273
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 59/96 (61%), Gaps = 13/96 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD I PH + + + +P A+ TVKK FVG +K D EE LR+YF
Sbjct: 66 EEVDAAINARPHKVDGRVVEPKRAVSREDSQRPGAHFTVKKTFVGSIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDK
Sbjct: 126 DQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDK 161
Score = 37.0 bits (84), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+ G+ + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIRGMSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYTTVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|112421201|ref|NP_001036248.1| heterogeneous nuclear ribonucleoprotein A1 [Macaca mulatta]
gi|2500575|sp|Q28521.3|ROA1_MACMU RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1; AltName: Full=Helix-destabilizing
protein; AltName: Full=Single-strand-binding protein;
AltName: Full=hnRNP core protein A1
gi|1332379|gb|AAB01436.1| hnRNP A1-gamma isoform [Macaca mulatta]
Length = 320
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
E+VD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EKVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D++ VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHNSVDKI 162
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 KVD 69
>gi|390470311|ref|XP_003734270.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
2 [Callithrix jacchus]
Length = 191
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
Query: 79 KPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
KP A+ TVKK+FVGG+K+ EE +LR+YF +G IE++ ++ ++++G KRGFAF+ F+D+
Sbjct: 118 KPGAHLTVKKIFVGGIKEHTEEYNLRDYFENYGKIETIEVMEDRQSGKKRGFAFVAFDDH 177
Query: 138 DVVDKIRG 145
D VDK+ G
Sbjct: 178 DTVDKLVG 185
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 139 VVD 141
VD
Sbjct: 88 EVD 90
>gi|149709520|ref|XP_001501077.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Equus caballus]
Length = 320
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 60/96 (62%), Gaps = 13/96 (13%)
Query: 60 EEVDMEIPGPPHMDKLEIGKPE------------ANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + +P+ A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVLREDSQRLGAHLTVKKLFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDK
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFLTFDDHDSVDK 161
>gi|403257202|ref|XP_003921219.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Saimiri boliviensis boliviensis]
Length = 299
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+ VGG+K D EE LR+YF
Sbjct: 66 EEVDAALNAKPHKVDGRVVEPKRAVLREDSQRPGAHLTVKKISVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ FND+D +DKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFNDHDSMDKI 162
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF FI + +
Sbjct: 7 PNKPEQLRKLFIGGLSFETTDESLRTHFEQWGTLTDCVVMKHPNTKRSRGFGFITYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|402867876|ref|XP_003898055.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Papio anubis]
Length = 320
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 60/95 (63%), Gaps = 13/95 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 67 EVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYFE 126
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDK
Sbjct: 127 QYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDK 161
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
PE ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ +
Sbjct: 7 PEEPEQLRKLFIGGLSFETTDETLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVG 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|226443091|ref|NP_084148.1| heterogeneous nuclear ribonucleoprotein A0 [Mus musculus]
gi|81916834|sp|Q9CX86.1|ROA0_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein A0;
Short=hnRNP A0
gi|12859567|dbj|BAB31694.1| unnamed protein product [Mus musculus]
Length = 305
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 64/122 (52%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFG +E ++ +K++G KRGF F+ F +D DK F + V V K V K +
Sbjct: 119 SQFGAVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 IE 167
I
Sbjct: 179 IH 180
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|390470313|ref|XP_002755160.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like isoform
1 [Callithrix jacchus]
Length = 186
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 54/68 (79%), Gaps = 1/68 (1%)
Query: 79 KPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
KP A+ TVKK+FVGG+K+ EE +LR+YF +G IE++ ++ ++++G KRGFAF+ F+D+
Sbjct: 118 KPGAHLTVKKIFVGGIKEHTEEYNLRDYFENYGKIETIEVMEDRQSGKKRGFAFVAFDDH 177
Query: 138 DVVDKIRG 145
D VDK+ G
Sbjct: 178 DTVDKLVG 185
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 139 VVD 141
VD
Sbjct: 88 EVD 90
>gi|442761959|gb|JAA73138.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Ixodes ricinus]
Length = 218
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/60 (61%), Positives = 49/60 (81%), Gaps = 1/60 (1%)
Query: 85 TVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ K++++G KD +E DLR+YF+QFG I SVN+VT KETG KRGFAF+E++DYD VDKI
Sbjct: 12 SRKRVWLGPSKDDVDESDLRDYFAQFGNILSVNLVTEKETGRKRGFAFVEYDDYDPVDKI 71
>gi|402864694|ref|XP_003896588.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Papio
anubis]
Length = 320
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+ F
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDCF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + E+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTEESLRSHFEQWGTLADCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|392354145|ref|XP_003751688.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Rattus
norvegicus]
Length = 307
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 64/122 (52%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFG +E ++ +K++G KRGF F+ F +D DK F + V V K V K +
Sbjct: 119 SQFGAVEKAEIIADKQSGKKRGFGFVYFQSHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 IE 167
I
Sbjct: 179 IH 180
Score = 42.4 bits (98), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|334350508|ref|XP_003342364.1| PREDICTED: hypothetical protein LOC100617798 [Monodelphis
domestica]
Length = 675
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 38/75 (50%), Positives = 51/75 (68%), Gaps = 4/75 (5%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
KP A+A VKK+FVGG+K D E DL +FSQFG +E ++ NK++G KRGF F+ F D+
Sbjct: 238 KPGAHARVKKIFVGGIKGDVSESDLVRHFSQFGPVEKAEIIVNKQSGKKRGFGFVHFFDH 297
Query: 138 DVVDKIRGFAFIEFN 152
D DK A I+F+
Sbjct: 298 DTADKA---AVIKFH 309
Score = 42.0 bits (97), Expect = 0.081, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 35/76 (46%), Gaps = 4/76 (5%)
Query: 67 PGPPHMDKLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGA 125
PGP + K +A + K+FVGGL E LR YF FG + +V N +T
Sbjct: 138 PGPGRSPSSSVLK---SAQLCKLFVGGLSPYTTEIRLRSYFEAFGCLRDCVVVMNAQTNR 194
Query: 126 KRGFAFIEFNDYDVVD 141
R F FI F+ D
Sbjct: 195 SRCFGFITFSSLSEAD 210
>gi|49522060|gb|AAH71067.1| LOC398455 protein [Xenopus laevis]
Length = 303
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 79 KPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A+A VKK+FVGGLK++ E DL E+FSQFG +E V ++ +K TG KRGF F+ FN +
Sbjct: 90 RPGAHAKVKKLFVGGLKEEVGESDLLEHFSQFGPVEKVEVIADKLTGKKRGFGFVYFNSH 149
Query: 138 DVVDKIRGFAFIEFNDYDV-VDKIVCK 163
D DK F N + V V K V K
Sbjct: 150 DSADKAAVVKFHSVNGHRVEVKKAVPK 176
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 88 KMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
K+F+GGL Q E+ LR++F +G + +V N +T R F F+ +
Sbjct: 8 KLFIGGLNVQTTEEGLRQHFETYGQLTDCVVVINPQTKRSRCFGFVTY 55
>gi|148237075|ref|NP_001082414.1| heterogeneous nuclear ribonucleoprotein A0 [Xenopus laevis]
gi|27735460|gb|AAH41277.1| LOC398455 protein, partial [Xenopus laevis]
gi|77748282|gb|AAI06306.1| LOC398455 protein [Xenopus laevis]
Length = 308
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 56/87 (64%), Gaps = 2/87 (2%)
Query: 79 KPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A+A VKK+FVGGLK++ E DL E+FSQFG +E V ++ +K TG KRGF F+ FN +
Sbjct: 95 RPGAHAKVKKLFVGGLKEEVGESDLLEHFSQFGPVEKVEVIADKLTGKKRGFGFVYFNSH 154
Query: 138 DVVDKIRGFAFIEFNDYDV-VDKIVCK 163
D DK F N + V V K V K
Sbjct: 155 DSADKAAVVKFHSVNGHRVEVKKAVPK 181
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 88 KMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
K+F+GGL Q E+ LR++F +G + +V N +T R F F+ +
Sbjct: 13 KLFIGGLNVQTTEEGLRQHFETYGQLTDCVVVINPQTKRSRCFGFVTY 60
>gi|109109574|ref|XP_001086021.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Macaca mulatta]
Length = 267
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD I PH + + + +P A+ TVKK FVG +K D EE LR+YF
Sbjct: 66 EEVDAAINARPHKVDGRVVEPKRAVSREDSQRPGAHFTVKKTFVGSIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDK
Sbjct: 126 DQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKT 162
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+ G+ + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIRGMSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYTTVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|326928626|ref|XP_003210477.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Meleagris gallopavo]
Length = 190
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/122 (37%), Positives = 65/122 (53%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + KP A+A VKK+FVGGLK D E DL ++F
Sbjct: 59 EEADAAMAASPHAVDGNSVELKRAVSREDSAKPGAHAKVKKLFVGGLKGDVGEGDLVQHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFG +E ++ +K++G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGPVEKAEIIADKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 IE 167
I
Sbjct: 179 IH 180
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LRE+F+ +GT+ +V N +T R F F+ ++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTTEAGLREHFAAYGTLTDCVVVLNPQTKRSRCFGFVTYSAVEEAD 62
>gi|402894543|ref|XP_003910414.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Papio anubis]
gi|402894545|ref|XP_003910415.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Papio anubis]
Length = 320
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD I PH + + + +P A+ TVKK FVG +K D EE LR+YF
Sbjct: 66 EEVDAAINARPHKVDGRVVEPKRAVSREDSQRPGAHFTVKKTFVGSIKEDMEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDK
Sbjct: 126 DQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKT 162
>gi|109109572|ref|XP_001086138.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 2 [Macaca mulatta]
Length = 320
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD I PH + + + +P A+ TVKK FVG +K D EE LR+YF
Sbjct: 66 EEVDAAINARPHKVDGRVVEPKRAVSREDSQRPGAHFTVKKTFVGSIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KRGFAF+ F+D+D VDK
Sbjct: 126 DQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKT 162
Score = 36.2 bits (82), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+ G+ + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIRGMSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYTTVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|444722445|gb|ELW63139.1| Heterogeneous nuclear ribonucleoprotein A1 [Tupaia chinensis]
Length = 188
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A+ TVKK+FVGG+K D EE LR+YF Q+G E + ++T+ +G KRGFAF+ F+D+
Sbjct: 26 RPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKSEVIEIMTDHGSGKKRGFAFVTFDDH 85
Query: 138 DVVDKI 143
D VDKI
Sbjct: 86 DSVDKI 91
>gi|148230657|ref|NP_001081318.1| heterogeneous nuclear ribonucleoprotein A3 homolog 1 [Xenopus
laevis]
gi|1710625|sp|P51968.1|RO31_XENLA RecName: Full=Heterogeneous nuclear ribonucleoprotein A3 homolog 1;
AltName: Full=hnRNP A3(A)
gi|214745|gb|AAA49949.1| ribonucleoprotein [Xenopus laevis]
Length = 373
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+Y
Sbjct: 79 EEVDASMSARPHKVDGRVVEPKRAVSREDSARPGAHLTVKKIFVGGIKEDTEEYHLRDYS 138
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+G IE++ ++ ++++G KRGFAF+ F+D+D VDKI
Sbjct: 139 ESYGKIETIEVMEDRQSGKKRGFAFVTFDDHDTVDKI 175
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F Q+G + ++ + +T RGF F+ ++ +
Sbjct: 20 PKEPEQLRKLFIGGLSFETTDDSLREHFEQWGKLTDCVVMRDPQTKRSRGFGFVTYSCVE 79
Query: 139 VVD 141
VD
Sbjct: 80 EVD 82
>gi|358334791|dbj|GAA32408.2| heterogeneous nuclear ribonucleoprotein A1/A3 [Clonorchis sinensis]
Length = 340
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/72 (52%), Positives = 51/72 (70%), Gaps = 1/72 (1%)
Query: 72 MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFA 130
M + + PE++ TVKK+FVG LK D +D+LR+YFS++G I +VT KETG RGF
Sbjct: 93 MPREDSQTPESHMTVKKLFVGALKKDVTQDELRDYFSKYGNIVDCEIVTWKETGESRGFG 152
Query: 131 FIEFNDYDVVDK 142
F+ F+DYD VDK
Sbjct: 153 FVTFDDYDPVDK 164
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL Q E L++++SQ+G I V ++ + + RGF FI + + ++VD
Sbjct: 17 RKLFIGGLTPQTTETMLKDFYSQWGEIVDVVVMKDSVSHRSRGFGFITYKEPEMVD 72
>gi|432877061|ref|XP_004073087.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 300
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 66/122 (54%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + K + + EA A VKK+FVGGLK D +EDDL +YF
Sbjct: 58 EEADAAMAASPHTVEGNWVEVKRAVPKKQADESEARAKVKKIFVGGLKNDIQEDDLTDYF 117
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQ+G +E+ +++ K+TG KRGF F+ F D+ D F N + V V K V K
Sbjct: 118 SQYGEVENSEIMSEKDTGKKRGFGFVHFTDHYAADMAVAVPFHTVNGHRVEVKKSVPKQE 177
Query: 166 IE 167
++
Sbjct: 178 MQ 179
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
K+FVGGLK D +D LR++F QFGT+ +V +K R F F+ +
Sbjct: 7 KLFVGGLKVDTNDDGLRKHFEQFGTLIDCAVVPHKTAQRSRCFGFVTY 54
>gi|444515638|gb|ELV10942.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Tupaia chinensis]
Length = 244
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 58/96 (60%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH M + E GKP A+ TVKK+FVGG+K D E LR+YF
Sbjct: 3 EVDAAVTARPHSIDGTVVEPKRAMAREESGKPGAHVTVKKLFVGGIKEDTGEHHLRDYFE 62
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+G +++ ++T+ +G KRGF F+ F+D+D V+KI
Sbjct: 63 GYGKTDTIEIITDWRSGKKRGFGFVTFDDHDPVEKI 98
>gi|402882999|ref|XP_003905018.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like [Papio
anubis]
Length = 378
Score = 76.6 bits (187), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 63/97 (64%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 87 EEVDAAMCARPHKVDGRVVEPKKAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 146
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G IE++ ++ ++++G K GFAF+ F+D+D VDKI
Sbjct: 147 EKYGKIETIEVMEDRQSGKKTGFAFVTFDDHDTVDKI 183
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + DD LRE+F ++GT+ ++ + +T RGF F+ ++ +
Sbjct: 28 PKEPEQLRKLFIGGLSFETTDDSLREHFEKWGTLTDCVVMRDPQTKRSRGFGFVTYSCVE 87
Query: 139 VVD 141
VD
Sbjct: 88 EVD 90
>gi|431892036|gb|ELK02483.1| Cleavage and polyadenylation specificity factor subunit 6 [Pteropus
alecto]
Length = 561
Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 36/66 (54%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A+ TVKK+FVGG+K D EE LR+YF Q+G IE + ++T++ + KRGFAF+ F D+
Sbjct: 26 RPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSNKKRGFAFVTFVDH 85
Query: 138 DVVDKI 143
D VDKI
Sbjct: 86 DSVDKI 91
>gi|296194380|ref|XP_002744925.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 1 [Callithrix jacchus]
Length = 320
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 59/97 (60%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPHMDKLEIGKPE------------ANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + +P+ A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRQGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE ++T++ +G KR FAF+ F+D+D VDKI
Sbjct: 126 EQYGKIEVTEIMTDRGSGKKRSFAFVTFDDHDTVDKI 162
Score = 40.4 bits (93), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKKPEWLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|291393062|ref|XP_002713027.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 2
[Oryctolagus cuniculus]
Length = 269
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD+ + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDVAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEERHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G K+GFA + F+D+D +DKI
Sbjct: 126 EQYGKIEVIQIMTDRGSGKKKGFASVTFDDHDSMDKI 162
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T R F F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRDFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|395849370|ref|XP_003797301.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Otolemur garnettii]
Length = 316
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + + +A+ TVKK FVGG+K D EE LR YF
Sbjct: 65 EEVDAAVNARPHKVDGRVVEPKRAVSREDSQRRDAHLTVKKFFVGGIKEDTEEHHLRAYF 124
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G +E + ++T++++G KRGFAF+ F+D+D VD I
Sbjct: 125 EQYGKMEVIEIMTDQDSGKKRGFAFVTFDDHDSVDNI 161
>gi|444725708|gb|ELW66264.1| 60S ribosomal protein L7a [Tupaia chinensis]
Length = 536
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/121 (38%), Positives = 70/121 (57%), Gaps = 14/121 (11%)
Query: 60 EEVDMEIPGPPHMDKLEIGKPE------------ANATVKKMFVGGLKD-QEEDDLREYF 106
EEVD + PH + +P+ A TVKK+FVGG+K+ EE LR+YF
Sbjct: 304 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRLGAYLTVKKIFVGGIKEGTEEHHLRDYF 363
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
Q+ IE + ++T++++G KRGFAF+ F+D+D VDKI + N ++ V K++ K
Sbjct: 364 EQYDKIEVIEIMTDRDSGKKRGFAFVAFDDHDSVDKIVIQKYHTVNGHNCEVRKVLSKQE 423
Query: 166 I 166
I
Sbjct: 424 I 424
>gi|402879932|ref|XP_003903574.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like, partial [Papio anubis]
Length = 152
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + +P A+ VKK+FVGG+K D EE LR+ F
Sbjct: 21 EEVDTAMNARPHKVDGRAVETKRTISRGNSQRPGAHLAVKKIFVGGIKEDTEEHHLRDNF 80
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G +E + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 81 EQYGKMEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 117
>gi|219521089|gb|AAI72047.1| Hnrnpa1l2 protein [Mus musculus]
gi|219521464|gb|AAI72049.1| Hnrnpa1l2 protein [Mus musculus]
gi|219521466|gb|AAI72057.1| Hnrnpa1l2 protein [Mus musculus]
gi|219521468|gb|AAI72058.1| Hnrnpa1l2 protein [Mus musculus]
Length = 275
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 16/124 (12%)
Query: 22 ESKCPSHEVRLAVEAGVLEVVTTRP-TINNKAMEEAQSEEEVDMEIPGPPHMDKLEIGKP 80
S+C VE V + RP ++ + +E ++ D +IPG
Sbjct: 8 RSRCFGFVTYTTVEE-VDAAMNARPHKVDGRVVEPKRAVSREDSQIPG------------ 54
Query: 81 EANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
A+ TVKK+ VGG+K D +E LR+YF Q+G IE + ++T++ +G KRGFAF+ F+D+D
Sbjct: 55 -AHLTVKKILVGGIKEDTKEHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDS 113
Query: 140 VDKI 143
VDKI
Sbjct: 114 VDKI 117
>gi|109111364|ref|XP_001106881.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 3 [Macaca mulatta]
Length = 320
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A++TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRGVEPKRAVSREDSQRPGAHSTVKKVFVGGIKEDAEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q G IE + ++T++ +G K+GFAF+ F+D+D VDK
Sbjct: 126 EQRGKIEVIEIMTDRGSGKKKGFAFVTFDDHDSVDKT 162
>gi|390457874|ref|XP_003732018.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Callithrix jacchus]
Length = 320
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 60/97 (61%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVK +FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDRRVVEPKRAVSREDSQRPGAHLTVKNIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++ ++ +G KRGFAF+ F+++D VDKI
Sbjct: 126 EQYGKIEVIEIMMDRGSGKKRGFAFVTFDNHDSVDKI 162
Score = 42.0 bits (97), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
PE ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PEEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTYCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|403309130|ref|XP_003944981.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Saimiri boliviensis boliviensis]
Length = 385
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 62/98 (63%), Gaps = 14/98 (14%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKK-MFVGGLK-DQEEDDLREY 105
EEVD + PH + + + +P A+ TVKK +FVGG+K D EE LR+Y
Sbjct: 130 EEVDAAMNARPHKVDGRVVEPKRAVSRGDSRRPGAHLTVKKKIFVGGIKEDAEEHHLRDY 189
Query: 106 FSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
F Q+G IE + ++T++ +G KRGFAF+ F+D+D +DKI
Sbjct: 190 FEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSMDKI 227
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+ T+ ++ + T RGF F+ + +
Sbjct: 71 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWRTLTDCVVMRDPNTKRSRGFGFVTYATVE 130
Query: 139 VVD 141
VD
Sbjct: 131 EVD 133
>gi|351694477|gb|EHA97395.1| Heterogeneous nuclear ribonucleoprotein A3 [Heterocephalus glaber]
Length = 282
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP A+ TVKK+FVGG+K D EE +LR+YF
Sbjct: 87 EEVDAAMCARPHKVDGRVVEPKRAVSREDSVKPGAHLTVKKIFVGGIKEDTEEYNLRDYF 146
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G E++ ++ ++++G KRGFAF F+D+D VDKI
Sbjct: 147 EKYGKTETMEVMEDRQSGKKRGFAFATFDDHDTVDKI 183
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 49/90 (54%), Gaps = 12/90 (13%)
Query: 64 MEIPGPPHMDKLEIGK-----------PEANATVKKMFVGGLKDQEEDD-LREYFSQFGT 111
ME+ PP + + G+ P+ ++K+F+GGL + DD LRE+F ++GT
Sbjct: 1 MEVKPPPGRPQPDSGRCRRHRGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGT 60
Query: 112 IESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+ + ++ + +T RGF F+ ++ + VD
Sbjct: 61 LTNCAVMRDPQTKRSRGFGFVTYSCVEEVD 90
>gi|296485782|tpg|DAA27897.1| TPA: heterogeneous nuclear ribonucleoprotein A2/B1-like [Bos
taurus]
Length = 360
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 48/60 (80%), Gaps = 1/60 (1%)
Query: 85 TVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
VKK+FVGG+K D EE LREYF ++G I+++ ++T++++G KRGF F+ F+DYD VDKI
Sbjct: 118 NVKKLFVGGIKEDTEEHHLREYFEKYGKIDAIEIITDRQSGKKRGFGFVTFDDYDPVDKI 177
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N ++K+F+GGL + E+ L+ Y+ Q+G + ++ + RGF F+ F+ VD
Sbjct: 25 NEQIRKLFIGGLSSETTEESLKNYYQQWGELTDCVVIRGLASQKSRGFGFVTFSSVAEVD 84
>gi|291393060|ref|XP_002713026.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1 isoform 1
[Oryctolagus cuniculus]
Length = 320
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 62/97 (63%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD+ + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDVAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEERHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G K+GFA + F+D+D +DKI
Sbjct: 126 EQYGKIEVIQIMTDRGSGKKKGFASVTFDDHDSMDKI 162
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T R F F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLMDCVVMRDPNTKRSRDFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|351694939|gb|EHA97857.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Heterocephalus glaber]
Length = 129
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A+ TVKK+FVGG+K D EE L++YF Q+G IE + ++T++ + KRGFAF+ F+D+
Sbjct: 61 RPGAHLTVKKIFVGGIKEDTEEHHLQDYFKQYGKIEVIEIMTDRGSRKKRGFAFVTFDDH 120
Query: 138 DVVDKI 143
D VDKI
Sbjct: 121 DSVDKI 126
>gi|119621693|gb|EAX01288.1| hCG2020860, isoform CRA_a [Homo sapiens]
Length = 214
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 58/92 (63%), Gaps = 13/92 (14%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
Q+G IE + ++T++ +G KRGFAF+ F+D+D
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHD 157
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|395546377|ref|XP_003775064.1| PREDICTED: uncharacterized protein LOC100925827 [Sarcophilus
harrisii]
Length = 471
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 52/75 (69%), Gaps = 4/75 (5%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A+A VKK+FVGGLK D E DL E+FSQFG +E ++ +K++G KRGF F+ F D+
Sbjct: 101 RPGAHARVKKIFVGGLKSDMVESDLVEHFSQFGPVERAKIILHKQSGKKRGFGFVYFFDH 160
Query: 138 DVVDKIRGFAFIEFN 152
D DK A ++F+
Sbjct: 161 DTADKA---AVVKFH 172
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
NA + K+FVGGL Q +E LR++F FG++ ++ N +T R F FI F+ D
Sbjct: 14 NAQLCKLFVGGLNPQTDEFGLRKHFEAFGSLTDCVVMMNPQTNRSRCFGFISFSTMKEAD 73
>gi|391339574|ref|XP_003744123.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Metaseiulus occidentalis]
Length = 334
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 48/64 (75%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+ N +VKK+FVGGL + E +DLR YF ++G+IE V + T ++TG KRGF F+ F+DYD
Sbjct: 107 DTNMSVKKLFVGGLSTETEAEDLRNYFGKYGSIEEVIIATERDTGRKRGFGFVTFDDYDS 166
Query: 140 VDKI 143
VDK+
Sbjct: 167 VDKV 170
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 36/58 (62%), Gaps = 1/58 (1%)
Query: 86 VKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
++K+F+GGL E L+EY+S++G I ++T+ + RGF F+ + D +VD+
Sbjct: 22 MRKLFIGGLDYKTNEVTLKEYYSKWGEIMDCVVMTDPYSKRSRGFGFVTYADSQMVDQ 79
>gi|45360449|ref|NP_988923.1| heterogeneous nuclear ribonucleoprotein A0 [Xenopus (Silurana)
tropicalis]
gi|38181654|gb|AAH59760.1| heterogeneous nuclear ribonucleoprotein A0 [Xenopus (Silurana)
tropicalis]
Length = 309
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
KP A+A VKK+FVGGLK D E DL E+F+QFG +E V ++ +K +G KRGF F+ F ++
Sbjct: 95 KPGAHAKVKKLFVGGLKEDVGESDLLEHFAQFGAVEKVEIIADKVSGKKRGFGFVYFTNH 154
Query: 138 DVVDKIRGFAFIEFNDYDV-VDKIVCK 163
D DK F N + V V K V K
Sbjct: 155 DSADKAAVVKFHSINGHRVEVKKAVPK 181
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 88 KMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
K+F+GGL Q E+ LR++F +G + +V N +T R F F+ +
Sbjct: 13 KLFIGGLNVQTTEEGLRQHFETYGQLTDCVVVINPQTKRSRCFGFVTY 60
>gi|410036043|ref|XP_003949991.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Pan troglodytes]
Length = 320
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A+ TVKK FVGG+K D EE LR+YF Q+G E + ++T++ +G KRGFAF+ F+D+
Sbjct: 97 RPGAHLTVKKTFVGGIKEDTEEHHLRDYFEQYGKTEVIEIMTDRGSGKKRGFAFVTFDDH 156
Query: 138 DVVDKI 143
D VDK
Sbjct: 157 DSVDKT 162
>gi|432961306|ref|XP_004086601.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 300
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 65/122 (53%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE + + PH + K + + EA VKK+FVGGLK D +EDDL +YF
Sbjct: 58 EEANAAMAASPHTVEGNWVEVKRAVPKKQTDESEARDKVKKIFVGGLKNDIQEDDLTDYF 117
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFG +E+ +++ KETG KRGF F+ F D+ D F N + V V K V K
Sbjct: 118 SQFGEVENSEIMSEKETGKKRGFGFVHFTDHYAADMAVAVPFHTVNGHRVEVKKAVPKQE 177
Query: 166 IE 167
++
Sbjct: 178 MQ 179
Score = 42.7 bits (99), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
K+FVGGLK D +D LR++F QFGT+ +V +K R F F+ +
Sbjct: 7 KLFVGGLKVDTNDDGLRKHFEQFGTLIDCAVVPHKTAQRSRCFGFVTY 54
>gi|444706746|gb|ELW48069.1| Heterogeneous nuclear ribonucleoprotein A1 [Tupaia chinensis]
Length = 220
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A+ TVKK+FVG +K D EE LR+YF Q+G IE + ++T++ +G K+GFAFI F+D+
Sbjct: 26 RPGAHLTVKKIFVGDIKEDTEEHHLRDYFEQYGKIEVIEIMTDQGSGKKKGFAFITFDDH 85
Query: 138 DVVDKI 143
D VDKI
Sbjct: 86 DSVDKI 91
>gi|392333807|ref|XP_003753001.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0, partial
[Rattus norvegicus]
Length = 226
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 2/91 (2%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A+A VKK+FVGGLK D E DL E+FSQFG +E ++ +K++G KRGF F+ F +
Sbjct: 9 RPGAHAKVKKLFVGGLKGDVAEGDLIEHFSQFGAVEKAEIIADKQSGKKRGFGFVYFQSH 68
Query: 138 DVVDKIRGFAFIEFNDYDV-VDKIVCKYNIE 167
D DK F + V V K V K +I
Sbjct: 69 DAADKAAVVKFHPIQGHRVEVKKAVPKEDIH 99
>gi|148233322|ref|NP_001080493.1| heterogeneous nuclear ribonucleoprotein A0 [Xenopus laevis]
gi|27924337|gb|AAH45023.1| Hnrpa0-prov protein [Xenopus laevis]
Length = 308
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/87 (48%), Positives = 55/87 (63%), Gaps = 2/87 (2%)
Query: 79 KPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
KP A+A VKK+FVGGLK++ E DL E+FSQFG +E V ++ +K +G KRGF F+ F +
Sbjct: 95 KPGAHAKVKKLFVGGLKEEVGESDLLEHFSQFGAVERVEIIADKLSGKKRGFGFVYFASH 154
Query: 138 DVVDKIRGFAFIEFNDYDV-VDKIVCK 163
D DK F N + V V K V K
Sbjct: 155 DSADKAAVVKFHSVNGHRVEVKKAVPK 181
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 88 KMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
K+F+GGL Q E+ LR++F +G + +V N +T R F F+ ++
Sbjct: 13 KLFIGGLNVQTTEEGLRQHFETYGQLTDCVVVINPQTKRSRCFGFVTYS 61
>gi|351706365|gb|EHB09284.1| Putative heterogeneous nuclear ribonucleoprotein A1-like protein 3
[Heterocephalus glaber]
Length = 95
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A+ TVKK+FVGG+K D E+ L++YF Q+G E + ++T++ +G KRGFAF+ F+D+
Sbjct: 26 RPGAHLTVKKIFVGGIKEDTEKHHLQDYFEQYGKTEVIEIMTDRGSGKKRGFAFVTFDDH 85
Query: 138 DVVDKI 143
D VDKI
Sbjct: 86 DSVDKI 91
>gi|355558052|gb|EHH14832.1| hypothetical protein EGK_00819, partial [Macaca mulatta]
Length = 278
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P + TVKK+FVGG+K D EE L +YF QFG +E + ++T++ +G KRGFAF+ F+D+
Sbjct: 97 RPGGHLTVKKVFVGGIKEDTEEHHLIDYFQQFGKMEVIEIMTDRGSGKKRGFAFVTFDDH 156
Query: 138 DVVDKI 143
D VDKI
Sbjct: 157 DSVDKI 162
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ +K+F+GGL + D+ LR + Q+GT+ ++ + T RGF F+ +
Sbjct: 7 PKELEQRRKLFIGGLSFETTDESLRSHCEQWGTLMDCVVLRDPNTKRSRGFGFVTYATVQ 66
Query: 139 VVDKI 143
VD +
Sbjct: 67 EVDAV 71
>gi|198452963|ref|XP_002137572.1| GA26466 [Drosophila pseudoobscura pseudoobscura]
gi|198132154|gb|EDY68130.1| GA26466 [Drosophila pseudoobscura pseudoobscura]
Length = 354
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 16/113 (14%)
Query: 34 VEAGVLE-VVTTRPTINNKAMEEAQSEEEVDMEIPGPPHMDKLEIGKPEA--NATVKKMF 90
V+ G +E V +TRP I + E + P + +LE KP N K+F
Sbjct: 62 VDPGSVENVQSTRPHIIDCKTVETK------------PALPRLEFNKPPGMGNGQTNKIF 109
Query: 91 VGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
+GGLKD +E +R+YFS+FGT+ SV ++ +KETG KRGF F+EF D D ++
Sbjct: 110 LGGLKDCHDEPMIRDYFSKFGTVMSVKVLIDKETGRKRGFGFLEFEDIDSAER 162
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 86 VKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIR 144
++K+F+GGL Q + LRE+FS+FG + ++ + + RGF F+ F D V+ ++
Sbjct: 12 LRKIFIGGLPTQTTPETLREFFSKFGAVADAVVMRDPVSNHSRGFGFVTFVDPGSVENVQ 71
>gi|444519006|gb|ELV12498.1| Heterogeneous nuclear ribonucleoprotein A1 [Tupaia chinensis]
Length = 327
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A+ TVKK+FVGG+K D EE LR+YF Q+G IE + ++T++ + KRGFAF+ F+D+
Sbjct: 26 RPGAHLTVKKIFVGGIKEDNEEHRLRDYFEQYGKIEVIEIMTDQGSSKKRGFAFVTFDDH 85
Query: 138 DVVDKI 143
D DKI
Sbjct: 86 DSADKI 91
>gi|260304980|ref|NP_001159443.1| predicted gene 5803 [Mus musculus]
gi|148676975|gb|EDL08922.1| mCG112810 [Mus musculus]
Length = 320
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 59/97 (60%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ VKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGKVVEPKRAISRQDSQRPGAHLIVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++T++ +G KR FAF+ F+D+D VD I
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRDFAFVTFDDHDSVDTI 162
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL Q D LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFQTTDKSLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|410954614|ref|XP_003983958.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Felis catus]
Length = 301
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A+ TV K+FVGG+K D EE LR+YF Q+G IE + ++T++ +G KRGF F+ F+D+
Sbjct: 97 RPGAHLTVTKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDQGSGKKRGFPFVTFDDH 156
Query: 138 DVVDKI 143
D VDKI
Sbjct: 157 DSVDKI 162
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + + LR +F Q+GTI ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTNESLRSHFEQWGTITDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|195144344|ref|XP_002013156.1| GL23972 [Drosophila persimilis]
gi|194102099|gb|EDW24142.1| GL23972 [Drosophila persimilis]
Length = 351
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 65/113 (57%), Gaps = 16/113 (14%)
Query: 34 VEAGVLE-VVTTRPTINNKAMEEAQSEEEVDMEIPGPPHMDKLEIGKPEA--NATVKKMF 90
V+ G +E V +TRP I + E + P + +LE KP N K+F
Sbjct: 124 VDPGSVENVQSTRPHIIDCKTVETK------------PALPRLEFNKPPGMGNGQTNKIF 171
Query: 91 VGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
+GGLKD +E +R+YFS+FGT+ SV ++ +KETG KRGF F+EF D D ++
Sbjct: 172 LGGLKDCHDEPMIRDYFSKFGTVMSVKVLIDKETGRKRGFGFLEFGDIDSAER 224
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 86 VKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIR 144
++K+F+GGL Q + LRE+FS+FG + ++ + + RGF F+ F D V+ ++
Sbjct: 74 LRKIFIGGLPTQTTPETLREFFSKFGAVADAVVMRDPVSNHSRGFGFVTFVDPGSVENVQ 133
Query: 145 G 145
Sbjct: 134 S 134
>gi|355753305|gb|EHH57351.1| hypothetical protein EGM_06957 [Macaca fascicularis]
Length = 320
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 60/97 (61%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A++TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRGVEPKRAVSREDSQRPGAHSTVKKVFVGGIKEDAEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q G IE + ++T++ +G K+GFAF+ F+D D VDK
Sbjct: 126 EQRGKIEVIEIMTDRGSGKKKGFAFVTFDDNDSVDKT 162
>gi|449474732|ref|XP_004175903.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A0 [Taeniopygia guttata]
Length = 310
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 65/122 (53%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + KP A+A VKK+FVGGLK D E L ++F
Sbjct: 59 EEADAAMAASPHAVDGNAVELKRAVSREDSAKPGAHAKVKKLFVGGLKGDVGEGVLMQHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQFG E ++++K++G KRGF F+ F ++D DK F + V V K V K +
Sbjct: 119 SQFGPXEKAEIISDKQSGKKRGFGFVYFQNHDAADKAAVVKFHPIQGHRVEVKKAVPKED 178
Query: 166 IE 167
I+
Sbjct: 179 IQ 180
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + +F+GG+ Q + LRE F+ +GT+ +V N +T R F F+ ++ + D
Sbjct: 3 NSALCXIFIGGINVQSTKAGLREQFAAYGTLTDCVVVLNPQTKRSRCFGFVTYSAVEEAD 62
>gi|444729715|gb|ELW70122.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Tupaia chinensis]
Length = 323
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/69 (47%), Positives = 52/69 (75%), Gaps = 1/69 (1%)
Query: 76 EIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
E GKP A+ TVKK+F+GG++ D EE LR+YF ++ I++ ++T++++G KR F F+ F
Sbjct: 111 ESGKPGAHVTVKKLFIGGIEEDTEEHHLRDYFEEYRKIDTTKIITDRQSGKKRSFDFVTF 170
Query: 135 NDYDVVDKI 143
+D+D VDKI
Sbjct: 171 DDHDPVDKI 179
>gi|313240342|emb|CBY32684.1| unnamed protein product [Oikopleura dioica]
Length = 402
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 72 MDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFA 130
+ + E +P + +VK+MF+GG+K+ +D+ EYF ++G +ESV ++ +K +G KRGF
Sbjct: 88 VSREESHRPGIHKSVKRMFMGGIKENVTSEDVTEYFEKYGKVESVELLQDKASGKKRGFG 147
Query: 131 FIEFNDYDVVDKI 143
F+ F+DYDVVDKI
Sbjct: 148 FVNFDDYDVVDKI 160
Score = 42.0 bits (97), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 86 VKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
++K+F+GGL + ED L +FS++G + ++ + T RGF F+ F +VD
Sbjct: 11 IRKLFIGGLSYNTTEDSLSNFFSKWGKLTDCVVMQDPATKRSRGFGFVTFEKAQMVD 67
>gi|296473573|tpg|DAA15688.1| TPA: heterogeneous nuclear ribonucleoprotein A1-like [Bos taurus]
Length = 320
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + +P A+ TVKK+FVGG+K D EE R+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSGEDSQRPGAHLTVKKIFVGGIKEDTEEHHXRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+ IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 126 EQYRKIEVIEIMTDRGSGKKRGFAFVTFDDHDSVDKI 162
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + + LR +F Q+GT+ ++ + T RGF + + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTNESLRSHFEQWGTLTDCVLMRDPNTKHSRGFGLVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|198420439|ref|XP_002131647.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A3
[Ciona intestinalis]
Length = 442
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
KP A+ATVKK+FVGG+KD E L+++F +FG +E V ++ ++ET KRGFAF+ F D+
Sbjct: 104 KPGAHATVKKIFVGGIKDDTTEQHLKDHFRKFGIVELVEVMEDRETRKKRGFAFVTFADH 163
Query: 138 DVVDKI 143
D VDKI
Sbjct: 164 DPVDKI 169
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 4/69 (5%)
Query: 76 EIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
+I +PE +K+F+GGL D + L YF++FG + ++ + +T RGF F+ F
Sbjct: 13 DINEPEQQ---RKLFIGGLSFDTTNESLSAYFTKFGEVTDSVVMMDPKTKKSRGFGFVTF 69
Query: 135 NDYDVVDKI 143
+VD +
Sbjct: 70 KRIKMVDAV 78
>gi|350015551|dbj|GAA42894.1| heterogeneous nuclear ribonucleoproteins A2/B1 [Clonorchis
sinensis]
Length = 292
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 80 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
PE +A VKK+FVGGLK D DDL EYF Q+GT+ +V K+T RGFAF+ F+D D
Sbjct: 96 PEVHAAVKKIFVGGLKKDVTNDDLAEYFGQYGTVTDAQIVMAKDTNTSRGFAFVTFDDTD 155
Query: 139 VVDKI 143
VDK+
Sbjct: 156 SVDKV 160
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 87 KKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIR 144
KK+FVGGL + E+ LR Y+SQ+G I V ++ + + RGF F+ F + VDK +
Sbjct: 13 KKLFVGGLNPKTNEESLRSYYSQWGEITDVVVMKDPRSNKSRGFGFVTFKEAASVDKAQ 71
>gi|313226215|emb|CBY21358.1| unnamed protein product [Oikopleura dioica]
Length = 402
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 53/73 (72%), Gaps = 1/73 (1%)
Query: 72 MDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFA 130
+ + E +P + +VK+MF+GG+K+ +D+ EYF ++G +ESV ++ +K +G KRGF
Sbjct: 88 VSREESHRPGIHKSVKRMFMGGIKENVTSEDVTEYFEKYGKVESVELLQDKASGKKRGFG 147
Query: 131 FIEFNDYDVVDKI 143
F+ F+DYDVVDKI
Sbjct: 148 FVNFDDYDVVDKI 160
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 86 VKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
++K+F+GGL + ED L +FS++G + ++ + T RGF F+ F +VD
Sbjct: 11 IRKLFIGGLSYNTTEDSLSNFFSKWGKLTDCVVMQDPATKRSRGFGFVTFEKAQMVD 67
>gi|399758|gb|AAB27595.1| FBRNP [Homo sapiens]
Length = 269
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
KP A+ TVKK+FVG +K D EE +LR+YF ++G IE++ ++ ++++G KRGFA + F+D+
Sbjct: 118 KPGAHLTVKKIFVGSIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFASVTFDDH 177
Query: 138 DVVDKI 143
D VDKI
Sbjct: 178 DTVDKI 183
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 64 MEIPGPPHMDKLEIGK-----------PEANATVKKMFVGGLKDQEEDD-LREYFSQFGT 111
ME+ PP + + G P+ ++K+F+GGL + DD LRE+F ++GT
Sbjct: 1 MEVKPPPGCPQPDSGSRRRRWGEEGHDPKEPEQLRKLFIGGLSFETTDDSLREHFEKWGT 60
Query: 112 IESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+ ++ + +T RGF F+ ++ VD
Sbjct: 61 LTDCLVMRDPQTKRSRGFGFVTYSCVTEVD 90
>gi|432112509|gb|ELK35247.1| Heterogeneous nuclear ribonucleoprotein A1 [Myotis davidii]
Length = 168
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 62/99 (62%), Gaps = 14/99 (14%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 21 EEVDTAMNSRPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 80
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRG 145
Q+G IE + ++T++ +G KRGFAF+ F+D++ D+ RG
Sbjct: 81 EQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHN-PDRGRG 118
>gi|226472210|emb|CAX77141.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 293
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 80 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
PE +A VKK+FVG LK D +DL +YFSQFGT+ +V KET RGFAF+ F+D D
Sbjct: 97 PEVHAAVKKIFVGALKKDVTNEDLSDYFSQFGTVTDAQIVIAKETNTSRGFAFVTFDDTD 156
Query: 139 VVDKI 143
VDK+
Sbjct: 157 AVDKV 161
Score = 43.9 bits (102), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
KK+F+GGL + +E+ L++Y+ Q+G I V ++ + + RGF F+ + D VD
Sbjct: 14 KKLFIGGLSPKTDENSLKDYYGQWGEIIDVVVMKDPRSQKSRGFGFVTYRDASSVD 69
>gi|432877067|ref|XP_004073090.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 282
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/122 (38%), Positives = 64/122 (52%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + K + + EA A VKK+FVGGLK D +EDDL +YF
Sbjct: 58 EEADAAMAASPHTVEGNWVEVKRAVPKKQADESEARAKVKKIFVGGLKNDIQEDDLTDYF 117
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQ+G +E+ +++ K TG KRGF F+ F D D F N + V V K V K
Sbjct: 118 SQYGEVENSEIMSEKTTGKKRGFGFVHFTDDYAADMAVAVPFHTVNGHRVEVKKSVPKQE 177
Query: 166 IE 167
++
Sbjct: 178 MQ 179
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
K+FVGGLK D +D LR++F QFGT+ +V +K R F F+ +
Sbjct: 7 KLFVGGLKVDTNDDGLRKHFEQFGTLIDCAVVPHKTAQRSRCFGFVTY 54
>gi|410971274|ref|XP_003992095.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A1-like 2-like [Felis catus]
Length = 325
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 61/109 (55%), Gaps = 12/109 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLKDQEEDDLREYFS 107
EEVD + PH + + + +P A+ VKK+FVGG+ D +E LR+YF
Sbjct: 66 EEVDAAMSARPHKVDGRVVVPQRAVSRGDSQRPGAHLAVKKVFVGGIXDTKEHHLRDYFE 125
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV 156
+G +E + ++T+ +G KRGF F+ F+D+D V KI + ND++
Sbjct: 126 HYGKMEVIEIMTDXGSGRKRGFTFVTFDDHDSVHKIVIQKYHTVNDHNC 174
>gi|432876614|ref|XP_004073060.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 302
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 13/96 (13%)
Query: 60 EEVDMEIPGPPHM-------DKLEIGKPEAN-----ATVKKMFVGGLKDQ-EEDDLREYF 106
EE D + PH+ K I + +AN A VKK+FVGG+KD E ++L EYF
Sbjct: 58 EEADAAMAAKPHVVEGNNVELKRAIAREDANNPDIVANVKKIFVGGVKDHVEAENLTEYF 117
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
SQFG +E ++++K+TG KRGF F+ F D D K
Sbjct: 118 SQFGRVEKSEIISDKQTGRKRGFGFVYFEDTDSATK 153
Score = 42.4 bits (98), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 88 KMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
K+FVGGL + D+ LR+YF Q+G + +V N++ G R F FI ++
Sbjct: 7 KLFVGGLNVETTDEGLRKYFEQYGALTDCVVVMNQQLGRSRCFGFITYS 55
>gi|410047791|ref|XP_003954550.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A1-like 2 [Pan troglodytes]
Length = 320
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNTRPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+ IE + ++T+ +G KRGFAF+ F+D+D V KI
Sbjct: 126 EQYEKIEVIEIMTDXGSGKKRGFAFVTFDDHDSVXKI 162
Score = 36.6 bits (83), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GG+ + D+ LR +F Q+G + ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGVSFETIDESLRSHFEQWGMLTDCLVMRDPNTKCSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|351711028|gb|EHB13947.1| Heterogeneous nuclear ribonucleoprotein A3-like protein 1
[Heterocephalus glaber]
Length = 167
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
KP A+ TVKK+FVGG+K D EE +LR+YF ++G I+++ ++ ++++G KR FAF+ F+D+
Sbjct: 26 KPGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKIDTIEVMEDRQSGKKREFAFVTFDDH 85
Query: 138 DVVDKI 143
VDKI
Sbjct: 86 STVDKI 91
>gi|426230606|ref|XP_004009357.1| PREDICTED: uncharacterized protein LOC101121854 [Ovis aries]
Length = 477
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 13/110 (11%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGL-KDQEEDDLRE 104
S EVD + PH + + + GKP A TVKK+FV + +D E+ LR+
Sbjct: 71 SVAEVDAAMAARPHSIDGKRVTPKRAVPREDYGKPGALVTVKKLFVCRIGEDTEKHHLRD 130
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDY 154
YF ++G I ++ +++++E+G KRGF F+ F+D+D VDK+ + N Y
Sbjct: 131 YFEKYGNINAIEIISDRESGRKRGFGFVTFDDHDPVDKLVLQKYHTINGY 180
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 73 DKLEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAF 131
D LE K + N +K+FVGGL + E+ L Y+ Q+G + ++ + + R F F
Sbjct: 8 DPLERNKRD-NEEFRKLFVGGLSSETTEETLWNYYQQWGYLTDCVVIRDPASQTSRRFGF 66
Query: 132 IEFNDYDVVD 141
+ F+ VD
Sbjct: 67 VTFSSVAEVD 76
>gi|281348755|gb|EFB24339.1| hypothetical protein PANDA_020597 [Ailuropoda melanoleuca]
Length = 205
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A+ TVKK+F+G +K D EE LR+YF Q+G E + ++T++ +G KRGFAFI F+D+
Sbjct: 29 RPGAHLTVKKIFLGAIKEDAEEHHLRDYFEQYGKTEVIEIMTDQGSGKKRGFAFIAFDDH 88
Query: 138 DVVDKI 143
D VDK
Sbjct: 89 DSVDKT 94
>gi|353232562|emb|CCD79917.1| putative heterogeneous nuclear ribonucleoprotein [Schistosoma
mansoni]
Length = 315
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 72 MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFA 130
M + + PE++ TV K+FVGGLK D ++LREYFS++G I +V KE+G RGF
Sbjct: 93 MPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNITECEVVAWKESGESRGFG 152
Query: 131 FIEFNDYDVVDK 142
F+ F+DYD VDK
Sbjct: 153 FVTFDDYDPVDK 164
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL E L++++SQ+G I V ++ + T RGF FI + + ++VD
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVD 72
>gi|256080846|ref|XP_002576687.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
Length = 315
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 72 MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFA 130
M + + PE++ TV K+FVGGLK D ++LREYFS++G I +V KE+G RGF
Sbjct: 93 MPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNITECEVVAWKESGESRGFG 152
Query: 131 FIEFNDYDVVDK 142
F+ F+DYD VDK
Sbjct: 153 FVTFDDYDPVDK 164
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL E L++++SQ+G I V ++ + T RGF FI + + ++VD
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVD 72
>gi|226472204|emb|CAX77138.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 293
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 80 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
PE +A VKK+FVG LK D +DL +YFSQFGT+ +V K+T RGFAF+ F+D D
Sbjct: 97 PEVHAAVKKIFVGALKKDVTNEDLSDYFSQFGTVTDAQIVIAKDTNTSRGFAFVTFDDTD 156
Query: 139 VVDKI 143
VDK+
Sbjct: 157 AVDKV 161
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
KK+F+GGL + +E+ L++Y+ Q+G I V ++ + + RGF F+ + D VD
Sbjct: 14 KKLFIGGLSPKTDENSLKDYYGQWGEIIDVVVMKDPRSQKSRGFVFVTYRDASSVD 69
>gi|432958384|ref|XP_004086005.1| PREDICTED: uncharacterized protein LOC101170742, partial [Oryzias
latipes]
Length = 372
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 54/89 (60%), Gaps = 2/89 (2%)
Query: 81 EANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
EA A VKK+FVGGLK D +EDDL +YFSQ+G +E+ +++ K TG KRGF F+ F D
Sbjct: 176 EARAKVKKIFVGGLKNDIQEDDLTDYFSQYGEVENSEIISEKTTGKKRGFGFVHFTDDYA 235
Query: 140 VDKIRGFAFIEFNDYDV-VDKIVCKYNIE 167
D F N + V V K V K ++
Sbjct: 236 ADMAVAVPFHIVNGHRVEVKKAVPKQEMQ 264
>gi|226473316|emb|CAX71344.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
Length = 236
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 72 MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFA 130
M + + PE++ TV K+FVGGLK D ++LREYFS++G I +V KE+G RGF
Sbjct: 93 MPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNITECEVVAWKESGESRGFG 152
Query: 131 FIEFNDYDVVDK 142
F+ F+DYD VDK
Sbjct: 153 FVTFDDYDPVDK 164
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL E L++++SQ+G I V ++ + T RGF FI + + ++VD
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVD 72
>gi|296490076|tpg|DAA32189.1| TPA: heterogeneous nuclear ribonucleoprotein A2/B1-like [Bos
taurus]
Length = 361
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 60/99 (60%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH-------MDKLEI-----GKPEANATVKKMFVGGL-KDQEEDDLRE 104
S E+D + PH M K + GK A TVKK+FVGG+ +D +E LR+
Sbjct: 71 SMAELDAAMAARPHFIDGKMVMPKRAVPREDHGKLGALITVKKLFVGGITEDMKEHHLRD 130
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I ++ +VT+ ++G KRGF FI F+D+D VDKI
Sbjct: 131 YFEKYGKINAIEIVTDGQSGKKRGFGFITFDDHDPVDKI 169
>gi|198431578|ref|XP_002128542.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A3
[Ciona intestinalis]
Length = 334
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 59/100 (59%), Gaps = 13/100 (13%)
Query: 57 QSEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLR 103
++E E D + PH + + E KP A+ VKK+F+GGLKD +E +L+
Sbjct: 62 ETEAEADACMDDRPHTLNSRQIDVKRAVSREESVKPGAHFQVKKIFIGGLKDGCDETNLK 121
Query: 104 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
EYF QFGTIE+ + +++ RGFAFI F D+D VDK+
Sbjct: 122 EYFGQFGTIETFELPLERDSEKPRGFAFITFEDHDTVDKL 161
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 86 VKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
++K+F+GG+ + D+ + +YFS++G IE ++ + TG +GF F+ F
Sbjct: 12 LRKLFIGGISYETTDESMNDYFSKYGKIEDCVVIKDSSTGRSKGFGFVTF 61
>gi|257215987|emb|CAX83143.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215989|emb|CAX83144.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215991|emb|CAX83145.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215993|emb|CAX83146.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215995|emb|CAX83147.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215997|emb|CAX83148.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257215999|emb|CAX83149.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257216001|emb|CAX83150.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257216003|emb|CAX83151.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|257216005|emb|CAX83152.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
Length = 168
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 2/90 (2%)
Query: 55 EAQSEEEVDME-IPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTI 112
+A E+D + + M + + PE++ TV K+FVGGLK D ++LREYFS++G I
Sbjct: 75 QANRPHEIDGKTVEAKRAMPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNI 134
Query: 113 ESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
+V KE+G RGF F+ F+DYD VDK
Sbjct: 135 TECEVVAWKESGESRGFGFVTFDDYDPVDK 164
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL E L++++SQ+G I V ++ + T RGF FI + + ++VD
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVD 72
>gi|226472218|emb|CAX77145.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 307
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 80 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
PE +A VKK+FVG LK D +DL +YFSQFGT+ +V K+T RGFAF+ F+D D
Sbjct: 97 PEVHAAVKKIFVGALKKDVTNEDLSDYFSQFGTVTDAQIVIAKDTNTSRGFAFVTFDDTD 156
Query: 139 VVDKI 143
VDK+
Sbjct: 157 AVDKV 161
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
KK+F+GGL + +E+ L++Y+ Q+G I V ++ + + RGF F+ + D VD
Sbjct: 14 KKLFIGGLSPKTDENSLKDYYGQWGEIIDVVVMKDPRSQKSRGFGFVTYRDASSVD 69
>gi|344247047|gb|EGW03151.1| Heterogeneous nuclear ribonucleoprotein A3 [Cricetulus griseus]
Length = 105
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
KP A+ TVKK+FVGG+K D EE +L EY ++G IE++ ++ ++++ KRGFAF+ F+D+
Sbjct: 28 KPGAHLTVKKIFVGGIKEDTEEYNLTEYVEKYGKIETIEVMEDRQSEEKRGFAFVTFDDH 87
Query: 138 DVVDKI 143
D VDKI
Sbjct: 88 DTVDKI 93
>gi|29841163|gb|AAP06176.1| SJCHGC06206 protein [Schistosoma japonicum]
gi|226473310|emb|CAX71341.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473312|emb|CAX71342.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473314|emb|CAX71343.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
gi|226473318|emb|CAX71345.1| Heterogeneous nuclear ribonucleoprotein A2 homolog 1 [Schistosoma
japonicum]
Length = 313
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 49/72 (68%), Gaps = 1/72 (1%)
Query: 72 MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFA 130
M + + PE++ TV K+FVGGLK D ++LREYFS++G I +V KE+G RGF
Sbjct: 93 MPREDSNSPESHMTVTKLFVGGLKKDVTHEELREYFSKYGNITECEVVAWKESGESRGFG 152
Query: 131 FIEFNDYDVVDK 142
F+ F+DYD VDK
Sbjct: 153 FVTFDDYDPVDK 164
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL E L++++SQ+G I V ++ + T RGF FI + + ++VD
Sbjct: 17 RKLFIGGLTPLTTEAKLKDFYSQWGEIVDVVVMKDGRTNRSRGFGFITYKEPEMVD 72
>gi|56758132|gb|AAW27206.1| SJCHGC06052 protein [Schistosoma japonicum]
gi|226472196|emb|CAX77134.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472198|emb|CAX77135.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472200|emb|CAX77136.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472202|emb|CAX77137.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472206|emb|CAX77139.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472208|emb|CAX77140.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472212|emb|CAX77142.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472214|emb|CAX77143.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472216|emb|CAX77144.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472220|emb|CAX77146.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226472222|emb|CAX77147.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
gi|226473414|emb|CAX71392.1| Heterogeneous nuclear ribonucleoprotein A1, A2/B1 homolog
[Schistosoma japonicum]
Length = 293
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 80 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
PE +A VKK+FVG LK D +DL +YFSQFGT+ +V K+T RGFAF+ F+D D
Sbjct: 97 PEVHAAVKKIFVGALKKDVTNEDLSDYFSQFGTVTDAQIVIAKDTNTSRGFAFVTFDDTD 156
Query: 139 VVDKI 143
VDK+
Sbjct: 157 AVDKV 161
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
KK+F+GGL + +E+ L++Y+ Q+G I V ++ + + RGF F+ + D VD
Sbjct: 14 KKLFIGGLSPKTDENSLKDYYGQWGEIIDVVVMKDPRSQKSRGFGFVTYRDASSVD 69
>gi|195451838|ref|XP_002073097.1| GK13335 [Drosophila willistoni]
gi|194169182|gb|EDW84083.1| GK13335 [Drosophila willistoni]
Length = 415
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 60/107 (56%), Gaps = 12/107 (11%)
Query: 38 VLEVVTTRP-TINNKAMEEAQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLKD 96
V V RP TI+NK +E ++ P M+ ++N K+F+GGL+D
Sbjct: 96 VENVQRARPHTIDNKDVETKRAL----------PRMEFTRSSAGQSNIRSAKIFLGGLRD 145
Query: 97 -QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
E+ +REYFSQFG + SV ++ +KETG KRGF F+EF D D+
Sbjct: 146 CHSEESIREYFSQFGIVTSVKLLLDKETGRKRGFGFLEFKDLASADR 192
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 81 EANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
E++ ++K+F+GGL Q + LR+YF QFG + ++ + + RGFAF+ + +
Sbjct: 36 ESDEHLRKIFIGGLSTQTTVETLRQYFRQFGEMVDAVVMRDPVSNHSRGFAFVTYLSPES 95
Query: 140 VDKIR 144
V+ ++
Sbjct: 96 VENVQ 100
>gi|256080848|ref|XP_002576688.1| heterogeneous nuclear ribonucleoprotein [Schistosoma mansoni]
Length = 162
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/72 (50%), Positives = 48/72 (66%), Gaps = 1/72 (1%)
Query: 72 MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFA 130
M + + PE++ TV K+FVGGLK D +LREYFS++G I +V KE+G RGF
Sbjct: 1 MPREDSNSPESHMTVTKLFVGGLKKDVTHGELREYFSKYGNITECEVVAWKESGESRGFG 60
Query: 131 FIEFNDYDVVDK 142
F+ F+DYD VDK
Sbjct: 61 FVTFDDYDPVDK 72
>gi|301508557|gb|ADK78240.1| heterogeneous nuclear ribonucleoprotein A2 [Schmidtea mediterranea]
Length = 331
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/94 (44%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
Query: 53 MEEAQSE--EEVDMEI-PGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQ 108
++EAQ+ EVD +I M + + PE++ TV K+FVGGLK D + LR YF+
Sbjct: 71 VDEAQNNRPHEVDGKIVEAKRAMPREDSNTPESHMTVNKLFVGGLKKDVTTEHLRHYFTS 130
Query: 109 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
+GTI +VT K++G RGF F+ F+DYD VDK
Sbjct: 131 YGTITDCEIVTWKDSGESRGFGFVTFDDYDPVDK 164
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 87 KKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIR 144
+K+F+GGL Q +E LR+Y+ Q+G + ++ + +TG RGF F+ + D ++VD+ +
Sbjct: 17 RKLFIGGLTPQTDEIRLRKYYEQWGELVDFVVMKDNKTGRSRGFGFVTYRDPEMVDEAQ 75
>gi|426254057|ref|XP_004020702.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like
[Ovis aries]
Length = 325
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 59/96 (61%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGL-KDQEEDDLREYFS 107
EVD + PH + + + GKP A TVKK+FV + +D E+ LR+YF
Sbjct: 74 EVDAAMAARPHSIDGKRVTPKRAVPREDYGKPGALVTVKKLFVCRIGEDTEKHHLRDYFE 133
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++G I ++ +V+++E+G KRGF F+ F+D+D VDK+
Sbjct: 134 KYGNINAIEIVSDRESGRKRGFGFVTFDDHDPVDKL 169
Score = 35.0 bits (79), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 73 DKLEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAF 131
D LE K + N +K+FVGGL + E+ L Y+ Q+G + ++ + + R F F
Sbjct: 8 DPLERNKRD-NEEFRKLFVGGLSSETTEETLWNYYQQWGYLTDCVVIRDPASQTSRRFGF 66
Query: 132 IEFNDYDVVD 141
+ F+ VD
Sbjct: 67 VTFSSVAEVD 76
>gi|348511819|ref|XP_003443441.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Oreochromis niloticus]
Length = 317
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 56/96 (58%), Gaps = 13/96 (13%)
Query: 60 EEVDMEIPGPPHMD-------KLEIGKPEAN-----ATVKKMFVGGLKDQ-EEDDLREYF 106
EE D + PH+ K I + +AN A VKK+FVGG+KD E++L EYF
Sbjct: 85 EEADAAMAAKPHVVEGNNVEVKRAIAREDANNPDILANVKKIFVGGVKDHIVEENLTEYF 144
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
SQFG +E ++++K+TG KRGF F+ F D D K
Sbjct: 145 SQFGAVEKAEIISDKQTGRKRGFGFVFFEDTDSATK 180
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 88 KMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
K+FVGGL + D+ LR+YF Q+GT+ +V N++ G R F FI ++
Sbjct: 34 KLFVGGLNVETTDEGLRKYFEQYGTLSDCVVVMNQQLGRSRCFGFITYS 82
>gi|148678223|gb|EDL10170.1| mCG1044699 [Mus musculus]
Length = 217
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
K A+ TVKK+FVGG+K D EE +LR+YF ++G E + ++ ++++G KRGFAF+ F+D+
Sbjct: 36 KSGAHLTVKKIFVGGIKEDTEEYNLRDYFEKYGKTEIIEVMKDRQSGKKRGFAFVTFDDH 95
Query: 138 DVVDKI 143
D DKI
Sbjct: 96 DTADKI 101
>gi|440897852|gb|ELR49462.1| Heterogeneous nuclear ribonucleoproteins A2/B1, partial [Bos
grunniens mutus]
Length = 349
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 59/99 (59%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH-------MDKLEI-----GKPEANATVKKMFVGGL-KDQEEDDLRE 104
S E+D + PH M K + GK A TVKK+FVGG+ +D +E LR+
Sbjct: 70 SMAELDAAMAARPHFIDGKMVMPKRAVPREDHGKLGALITVKKLFVGGITEDMKEHHLRD 129
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I ++ +VT+ ++G KRGF FI F D+D VDKI
Sbjct: 130 YFEKYGKINAIEIVTDGQSGKKRGFGFITFEDHDPVDKI 168
>gi|441657453|ref|XP_004091180.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Nomascus leucogenys]
Length = 379
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 51/66 (77%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
KP A+ TVKK+FVG +K D EE +LR+YF ++G IE++ ++ ++++G KRGFA + F+D+
Sbjct: 118 KPGAHLTVKKIFVGSIKEDTEEYNLRDYFEKYGKIETIEVMEDRQSGKKRGFASVTFDDH 177
Query: 138 DVVDKI 143
D VDK
Sbjct: 178 DTVDKT 183
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 12/90 (13%)
Query: 64 MEIPGPPHMDKLEIGK-----------PEANATVKKMFVGGLKDQEEDD-LREYFSQFGT 111
ME+ PP + + G+ P+ ++K+F+G L + DD LREYF ++GT
Sbjct: 1 MEVKPPPGGPQPDSGRRRRRQGEEGHDPKEPEQLRKLFIGDLSFETTDDSLREYFEKWGT 60
Query: 112 IESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+ ++ + +T RGF F+ ++ VD
Sbjct: 61 LTDCVVMRDAQTKRSRGFGFVAYSCVTEVD 90
>gi|432877083|ref|XP_004073098.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Oryzias
latipes]
Length = 347
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 14/124 (11%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
+ EE + + PH + K + + EA A VKK+FVGGLK D +EDDL +
Sbjct: 56 TPEEANAAMAASPHTVEGNWVEVKRAVPKKQADESEARAKVKKIFVGGLKNDIQEDDLTD 115
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCK 163
YFSQ+G +E+ +++ K TG KRGF F+ F D D F N + V V K V K
Sbjct: 116 YFSQYGEVENSEIISEKTTGKKRGFGFVHFTDDYAADMAVAVPFHIVNGHRVEVKKAVPK 175
Query: 164 YNIE 167
++
Sbjct: 176 QEMQ 179
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
K+FVGGLK D +D LR++F QFGT+ +V +K R F F+ +
Sbjct: 7 KLFVGGLKVDTNDDGLRKHFEQFGTLIDCAVVPHKTAQRSRCFGFVTY 54
Score = 43.5 bits (101), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
K+FVGGLK D +D LR++F QFGT+ +V +K R F F+ +
Sbjct: 197 KLFVGGLKVDTNDDGLRKHFEQFGTLIDCAVVPHKTAQRSRCFGFVTY 244
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%), Gaps = 13/64 (20%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
+ EE + + PH + K + + EA A VKK+FVGGLK D +EDDL +
Sbjct: 246 TPEEANAAMAASPHTVEGNWVEVKRAVPKKQADESEARAKVKKIFVGGLKNDIQEDDLTD 305
Query: 105 YFSQ 108
YFSQ
Sbjct: 306 YFSQ 309
>gi|148679912|gb|EDL11859.1| mCG122300 [Mus musculus]
Length = 317
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 52/66 (78%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
KP A+ TVKK+FVGG+K D EE +LR+Y ++G IE++ ++ ++++ KRGFAF+ F+D+
Sbjct: 62 KPGAHLTVKKIFVGGIKEDTEEYNLRDYSEKYGKIETIEVMEDRQSEKKRGFAFVTFDDH 121
Query: 138 DVVDKI 143
D +DKI
Sbjct: 122 DTLDKI 127
>gi|402911238|ref|XP_003918244.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Papio
anubis]
Length = 321
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 14/98 (14%)
Query: 60 EEVDMEIPGPPH-MDKLEIG-----------KPEANATVKKMFVGGLKD--QEEDDLREY 105
EEVD + PH +D +G +P A+ TVK +FVGG+K+ +E L +Y
Sbjct: 66 EEVDAAMNARPHKVDGRVVGPKRAVSREDSQRPGAHLTVKNIFVGGIKEDTEEHHHLIDY 125
Query: 106 FSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
F Q+G IE ++T++ +G KRGFAF+ F+D+D VDK+
Sbjct: 126 FEQYGKIEVTEIMTDRGSGKKRGFAFVTFDDHDSVDKL 163
>gi|402877500|ref|XP_003902463.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like 2-like
[Papio anubis]
Length = 344
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/66 (53%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A+ TVKK+FVGG+K D EE LR+ F Q+G IE + ++T++ +G KRGFAF F+D+
Sbjct: 161 RPGAHLTVKKIFVGGVKEDTEEHHLRDDFEQYGKIEVIEIMTDRGSGKKRGFAFDTFDDH 220
Query: 138 DVVDKI 143
D VDK
Sbjct: 221 DSVDKT 226
>gi|405977263|gb|EKC41722.1| Heterogeneous nuclear ribonucleoprotein A2-like protein 1
[Crassostrea gigas]
Length = 363
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 57/91 (62%), Gaps = 2/91 (2%)
Query: 55 EAQSEEEVD-MEIPGPPHMDKLEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTI 112
+A ++D E+ M + E G+ E+ + +KMFVGGL+D EDD+RE F ++G I
Sbjct: 100 QANRPHKIDGREVETKRAMPREESGRSESQKSNEKMFVGGLRDTTTEDDVREAFQEYGNI 159
Query: 113 ESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+++ ++ +K T RGF F+ F+DYD VDK
Sbjct: 160 KNIELIKDKATNKTRGFCFVTFDDYDPVDKC 190
Score = 42.4 bits (98), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 2/67 (2%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
PEA +K+F+GGL + D L+ YF ++GTI ++T+ +T RGF FI +
Sbjct: 36 PEAEQ-YRKLFIGGLSYETTDSTLKSYFEKWGTITDCVVMTDPQTKRSRGFGFITYEKVA 94
Query: 139 VVDKIRG 145
++D+ +
Sbjct: 95 MLDECQA 101
>gi|344251072|gb|EGW07176.1| Heterogeneous nuclear ribonucleoprotein A3 [Cricetulus griseus]
Length = 175
Score = 71.2 bits (173), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
KP A VKKMFVGG++ D EE +LR+YF ++G IE++ ++ ++++ KRGFA + F+D+
Sbjct: 96 KPGACLAVKKMFVGGIREDTEEYNLRDYFEKYGKIETIEVMEDRQSRKKRGFARVTFDDH 155
Query: 138 DVVDKI 143
D VDKI
Sbjct: 156 DTVDKI 161
Score = 35.8 bits (81), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Query: 75 LEIGKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIE 133
+E P+ ++K F+GGL + DD LRE+F ++GT+ ++ + +GF F+
Sbjct: 1 MEGHDPKEPEQLRKPFIGGLGFEATDDCLREHFVKWGTLTDCVVMRDSPNKMFQGFGFVT 60
Query: 134 FNDYDVVD 141
++ + VD
Sbjct: 61 YSCVEEVD 68
>gi|296192610|ref|XP_002744138.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Callithrix jacchus]
Length = 335
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD I PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 81 EEVDAAINARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 140
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G IE + ++ ++ +G KRGFAF ++D +DKI
Sbjct: 141 EQYGKIEVIEIMMDRGSGKKRGFAFAISANHDSMDKI 177
Score = 40.0 bits (92), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 86 VKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
++K+F GGL + D+ LR +F Q+GT++ ++ N T RGF F+ + + VD
Sbjct: 28 LRKLFTGGLSFETTDESLRSHFEQWGTLKDGVVMRNPNTKRSRGFGFVTYATVEEVD 84
>gi|402897281|ref|XP_003911697.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Papio anubis]
Length = 320
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A++TVKK+FVG +K D EE LR+YF Q G IE + ++T++ +G K+GFAF+ F+D+
Sbjct: 97 RPGAHSTVKKVFVGEIKEDAEEHHLRDYFEQCGKIEVIEIMTDRGSGKKKGFAFVTFDDH 156
Query: 138 DVVDKI 143
D VDK
Sbjct: 157 DSVDKT 162
>gi|441676558|ref|XP_004092684.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A3-like
[Nomascus leucogenys]
Length = 246
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
KP A+ TVK +FVGG++ D EE +LR+Y ++G IE+ ++ + ++G KRGFAF+ F+D+
Sbjct: 79 KPGAHLTVKTIFVGGIEEDTEECNLRDYVEKYGKIETTEVLEDGQSGQKRGFAFVTFDDH 138
Query: 138 DVVDKI 143
D VDKI
Sbjct: 139 DTVDKI 144
>gi|355750213|gb|EHH54551.1| hypothetical protein EGM_15416, partial [Macaca fascicularis]
Length = 182
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 13/96 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE D + PH + + + +P A+A VKK+FVGGLK D E DL E+F
Sbjct: 59 EEADAAMAASPHAVDGNTVELKRAVSREDSARPGAHAKVKKLFVGGLKGDVAEGDLIEHF 118
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
SQFGT+E ++ +K++G KRGF F+ D V K
Sbjct: 119 SQFGTVEKAEIIADKQSGKKRGFGFVYAADKAAVVK 154
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+ + K+F+GGL Q E LR +F FGT+ +V N +T R F F+ +++ + D
Sbjct: 3 NSQLCKLFIGGLNVQTSESGLRGHFEAFGTLTDCVVVVNPQTKRSRCFGFVTYSNVEEAD 62
>gi|297690158|ref|XP_002822492.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Pongo abelii]
Length = 320
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDTVMNARPHKVGGRVVEPKTAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHPLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G E + ++T++ +G K+ FAFI F+++D DKI
Sbjct: 126 EQYGKTEVIEIMTDQGSGKKKDFAFITFDNHDSTDKI 162
>gi|195113431|ref|XP_002001271.1| GI10693 [Drosophila mojavensis]
gi|193917865|gb|EDW16732.1| GI10693 [Drosophila mojavensis]
Length = 420
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/105 (44%), Positives = 59/105 (56%), Gaps = 11/105 (10%)
Query: 34 VEAGVLE-VVTTRPTINNKAMEEAQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVG 92
VE G +E V RP I + + VD + P H IG +N K+F+G
Sbjct: 97 VEPGSVENVQRARPHIID--------SKTVDTKRAFPRHEFNKAIGH-LSNIKTNKIFLG 147
Query: 93 GLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 136
GLKD +E LREYFSQFG I SV ++ +KETG KRGF F+EF D
Sbjct: 148 GLKDCHDESTLREYFSQFGAINSVKVLLDKETGRKRGFGFLEFED 192
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 44/97 (45%), Gaps = 17/97 (17%)
Query: 73 DKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAF 131
++ + E N ++K+FVGGL + D +R++FSQFG + ++ + + RGF F
Sbjct: 34 NQSSVNASENNEHLRKIFVGGLSINTTADTMRQFFSQFGVVSDAVVMRDPISNRSRGFGF 93
Query: 132 IEFN----------------DYDVVDKIRGFAFIEFN 152
+ + D VD R F EFN
Sbjct: 94 VTYVEPGSVENVQRARPHIIDSKTVDTKRAFPRHEFN 130
>gi|281348848|gb|EFB24432.1| hypothetical protein PANDA_004396 [Ailuropoda melanoleuca]
Length = 202
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 50/66 (75%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
KP A+ TVK +FVG +K D EE +LR+YF ++G I++ ++ ++ +G KRGFAF+ F+D+
Sbjct: 29 KPGAHLTVKNIFVGNIKKDTEEYNLRDYFEKYGKIKTAEVMEDRWSGKKRGFAFVTFDDH 88
Query: 138 DVVDKI 143
D VDKI
Sbjct: 89 DTVDKI 94
>gi|311248526|ref|XP_003123185.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like [Sus
scrofa]
Length = 354
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 57/96 (59%), Gaps = 15/96 (15%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + E GKP A T KK+FVGG+K D E LR+YF
Sbjct: 74 EVDAAMAARPHSIDGRVVASKRVVPREESGKPGACVTTKKLFVGGIKEDTTERHLRDYFE 133
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++GTI+++ ++ +++G K F F+ F+D+D VDKI
Sbjct: 134 RYGTIDAIEII--RQSGRKTAFGFVTFDDHDPVDKI 167
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + +E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 21 RKLFIGGLCSETKEESLRNYYQQWGKLTDCVVIRDPSSQRSRGFGFVIFSSVAEVD 76
>gi|311248536|ref|XP_003123190.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1-like [Sus
scrofa]
Length = 354
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 57/96 (59%), Gaps = 15/96 (15%)
Query: 61 EVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH + + E GKP A T KK+FVGG+K D E LR+YF
Sbjct: 74 EVDAAMAARPHSIDGRVVASKRVVPREESGKPGACVTTKKLFVGGIKEDTTERHLRDYFE 133
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++GTI+++ ++ +++G K F F+ F+D+D VDKI
Sbjct: 134 RYGTIDAIEII--RQSGRKTAFGFVTFDDHDPVDKI 167
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+K+F+GGL + +E+ LR Y+ Q+G + ++ + + RGF F+ F+ VD
Sbjct: 21 RKLFIGGLCSETKEESLRNYYQQWGKLTDCVVIRDPSSQRSRGFGFVIFSSVAEVD 76
>gi|332837971|ref|XP_001142796.2| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 4 [Pan troglodytes]
Length = 326
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A TVKK+FVGG+K D EE LR+Y+
Sbjct: 66 EEVDAAMNARPHKMGGRVVEPKTAVSREDSQRPGAYLTVKKIFVGGIKEDTEEHPLRDYY 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G E + ++T++ +G KR FAF+ F+++D DKI
Sbjct: 126 EQYGNTEVIEIMTDQGSGKKRDFAFVTFDNHDSTDKI 162
Score = 38.9 bits (89), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL+ + D+ LR + Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPKQLRKLFIGGLRFETSDESLRSHSEQWGTLTECVVMRDPNTNRSRGFGFVPYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|147903976|ref|NP_001087778.1| MGC84815 protein [Xenopus laevis]
gi|51703946|gb|AAH81212.1| MGC84815 protein [Xenopus laevis]
Length = 291
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 80 PEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
PE +A VKK+FVGGLK D +DL EYF +FG + ++V K+T RGFAF+ F+D D
Sbjct: 96 PEVHAAVKKIFVGGLKKDVTNEDLAEYFGKFGNVTDASIVVAKDTNTSRGFAFVTFDDTD 155
Query: 139 VVDKI 143
VDK+
Sbjct: 156 SVDKV 160
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 2/70 (2%)
Query: 76 EIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
++G P+A+ KK+FVGGL + ED LR Y+SQ+G I V ++ + + RGF F+ F
Sbjct: 3 QVGDPKADQD-KKLFVGGLNPKTNEDSLRAYYSQWGEITDVVVMKDPRSNKSRGFGFVTF 61
Query: 135 NDYDVVDKIR 144
+ VDK +
Sbjct: 62 KEASSVDKAQ 71
>gi|345792219|ref|XP_864182.2| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like isoform 3 [Canis lupus familiaris]
Length = 321
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 63/100 (63%), Gaps = 14/100 (14%)
Query: 58 SEEEVDMEIPGPPH-MD-----------KLEIGKPEANATVKKMFVGGLK-DQEEDDLRE 104
+ E+VD + PH MD + + +P A+ TVKK+FVGG+K D EE L++
Sbjct: 64 TREDVDAVMNARPHKMDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLKD 123
Query: 105 YF-SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF Q+ IE + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 124 YFFEQYEKIEVIEIMTDRGSGKKRGFAFVTFDDHDFVDKI 163
>gi|403277845|ref|XP_003930556.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Saimiri boliviensis boliviensis]
Length = 295
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
E+VD + PH + + + +P A TVKK+ VGG+K D EE LR+YF
Sbjct: 69 EKVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAYLTVKKILVGGIKEDAEEHHLRDYF 128
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G E + ++ ++ +G KRGFAF+ F+D+D V+K
Sbjct: 129 EQYGKTEVIEIMADRGSGKKRGFAFVTFDDHDSVNKT 165
>gi|397467692|ref|XP_003805542.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Pan paniscus]
Length = 326
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A TVKK+FVGG+K D EE LR+Y+
Sbjct: 66 EEVDAAMNARPHKMGGRVVEPKTAVSREDSQRPGAYLTVKKIFVGGIKEDTEEHPLRDYY 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G E + ++T++ +G KR FAF+ F+++D DKI
Sbjct: 126 EQYGKTEVIEIMTDQGSGKKRDFAFVTFDNHDSTDKI 162
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL+ + D+ LR + Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPKQLRKLFIGGLRFETSDESLRSHSEQWGTLTECVVMRDPNTNRSRGFGFVPYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|402860565|ref|XP_003894696.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Papio anubis]
Length = 321
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 82 ANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVV 140
A+ TVKK FVGG+K D EE LR+YF Q+G IE + ++T++ +G KR FAFI F+++D V
Sbjct: 100 AHLTVKKKFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKRDFAFITFDNHDSV 159
Query: 141 DK 142
DK
Sbjct: 160 DK 161
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q G + ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKIFIGGLSFETTDESLRSHFEQRGMLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|297278811|ref|XP_001114493.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A1-like [Macaca
mulatta]
Length = 491
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P + TVKK+FVGG+K D EE L +YF QFG +E + ++T++ +G K GFAF+ F+++
Sbjct: 218 RPGGHLTVKKVFVGGIKEDTEEHHLIDYFQQFGKMEVIEIMTDRGSGKKSGFAFVTFDNH 277
Query: 138 DVVDKI 143
D +DKI
Sbjct: 278 DSMDKI 283
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 18/119 (15%)
Query: 27 SHEVRLAVEAGVLEVVT-TRPTINNKAMEEAQSEEEVDMEIPGPPHMDKLEIGKPEANAT 85
SH+ +A++ VL V T T P+I ++ P + K E P+
Sbjct: 90 SHQQTVALKHWVLAVFTKTVPSIVKVSLL--------------PAIISKSE--SPKELEQ 133
Query: 86 VKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+F+GGL + D+ LR + Q+GT+ ++ + T RGF F+ + VD +
Sbjct: 134 RRKLFIGGLSFETTDESLRSHCEQWGTLMDCVVLRDPNTKRSRGFGFVTYATVQEVDAV 192
>gi|432952652|ref|XP_004085179.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like [Oryzias
latipes]
Length = 240
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 63/122 (51%), Gaps = 14/122 (11%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EE + + PH + K + + EA VKK+FVGGLK D +EDDL +YF
Sbjct: 58 EEANAAMAASPHTVEGNWVEVKRAVPKKQTDESEARDKVKKIFVGGLKNDIQEDDLTDYF 117
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYN 165
SQ+G +E+ +++ K TG KRGF F+ F D D F N + V V K V K
Sbjct: 118 SQYGEVENSEIMSEKTTGKKRGFGFVHFTDDYAADMAVAVPFHTVNGHRVEVKKAVPKQE 177
Query: 166 IE 167
++
Sbjct: 178 MQ 179
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
K+FVGGLK D +D LR++F QFGT+ +V +K R F F+ +
Sbjct: 7 KLFVGGLKVDTNDDGLRKHFEQFGTLIDFAVVPHKTAQRSRCFGFVTY 54
>gi|355745323|gb|EHH49948.1| hypothetical protein EGM_00696, partial [Macaca fascicularis]
Length = 313
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 49/66 (74%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P + TVKK+FVGG+K D EE L +YF QFG +E + ++T++ +G K GFAF+ F+++
Sbjct: 97 RPGGHLTVKKVFVGGIKEDTEEHHLIDYFQQFGKMEVIEIMTDRGSGKKSGFAFVTFDNH 156
Query: 138 DVVDKI 143
D +DKI
Sbjct: 157 DSMDKI 162
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ +K+F+GGL + D+ LR + Q+GT+ ++ + T RGF F+ +
Sbjct: 7 PKELEQRRKLFIGGLSFETTDESLRSHCEQWGTLMDCVVLRDPNTKRSRGFGFVTYATVQ 66
Query: 139 VVDKI 143
VD +
Sbjct: 67 EVDAV 71
>gi|355705101|gb|EHH31026.1| Heterogeneous nuclear ribonucleoprotein A1-like 2 [Macaca mulatta]
Length = 300
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 49/67 (73%), Gaps = 2/67 (2%)
Query: 79 KPEANATVKKMFVGGLKD--QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 136
+P A+ TVK +FVGG+K+ +E L +YF Q+G IE ++T++ +G KRGFAF+ F+D
Sbjct: 97 RPGAHLTVKNIFVGGIKEDTEEHHHLIDYFEQYGKIEVTEIMTDRGSGKKRGFAFVTFDD 156
Query: 137 YDVVDKI 143
+D VDK+
Sbjct: 157 HDSVDKL 163
>gi|393911996|gb|EJD76540.1| RNA recognition domain-containing protein [Loa loa]
Length = 309
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 56/98 (57%), Gaps = 13/98 (13%)
Query: 59 EEEVDMEIPGPPHM------------DKLEIGKPEANATVKKMFVGGLKDQEEDDLRE-Y 105
+ EVD + PH+ + + + EAN + K+++V G++++ + + E Y
Sbjct: 50 QSEVDAAMAARPHVIDGKTVDPKRAVPRDQSARSEANVSSKRLYVSGVREEHTEQMFEDY 109
Query: 106 FSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
FSQFG + V ++ +K TG RGFAFI F+DYD VDK
Sbjct: 110 FSQFGKVLKVEIIADKNTGKPRGFAFISFDDYDPVDKC 147
Score = 38.5 bits (88), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 89 MFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
MF+GGL D+ L+E++SQ+G + ++ + T RGF F+ F+ VD
Sbjct: 1 MFIGGLSATTTDEALKEFYSQWGELVDCIVMRDPATKRSRGFGFVSFSKQSEVD 54
>gi|119894797|ref|XP_580324.3| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Bos
taurus]
gi|297476672|ref|XP_002688896.1| PREDICTED: heterogeneous nuclear ribonucleoproteins A2/B1 [Bos
taurus]
gi|296485860|tpg|DAA27975.1| TPA: heterogeneous nuclear ribonucleoprotein A2/B1-like [Bos
taurus]
Length = 372
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 59/99 (59%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGL-KDQEEDDLRE 104
S EVD + PH + + + G P A TVKK+FV + +D E+ LR+
Sbjct: 79 SMAEVDAAMAARPHSIDGKRVAPKRAVPREDYGIPGALVTVKKLFVCKIGEDTEKHHLRD 138
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I ++ +++++E+G KRGF F+ F+D+D VDK+
Sbjct: 139 YFGKYGKINAIEIISDRESGRKRGFGFVTFDDHDPVDKL 177
Score = 37.4 bits (85), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 41/90 (45%), Gaps = 7/90 (7%)
Query: 53 MEEAQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGT 111
M +A E + P +K + N +K+FVGGL + E+ L Y+ Q+G
Sbjct: 1 MAQATKRAEKETSTSDPSERNKRD------NEKFRKLFVGGLSSETTEETLWNYYRQWGY 54
Query: 112 IESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+ ++ + + R FAF+ F+ VD
Sbjct: 55 LTDCVVIRDPASQTSRRFAFVTFSSMAEVD 84
>gi|444723475|gb|ELW64130.1| Metaxin-2 [Tupaia chinensis]
Length = 389
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 47/61 (77%), Gaps = 1/61 (1%)
Query: 84 ATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
ATV+++FVGG+K D EE LR+YF Q+G IE + ++ ++ +G KRGFAF+ F+D+ VDK
Sbjct: 18 ATVEEIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMMDRGSGKKRGFAFVTFDDHSSVDK 77
Query: 143 I 143
I
Sbjct: 78 I 78
>gi|440910144|gb|ELR59970.1| hypothetical protein M91_04889, partial [Bos grunniens mutus]
Length = 359
Score = 68.6 bits (166), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 59/99 (59%), Gaps = 13/99 (13%)
Query: 58 SEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGL-KDQEEDDLRE 104
S EVD + PH + + + G P A TVKK+FV + +D E+ LR+
Sbjct: 81 SMAEVDAAMAARPHSIDGKRVAPKRAVPREDYGIPGALVTVKKLFVCKIGEDTEKHHLRD 140
Query: 105 YFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
YF ++G I ++ +++++E+G KRGF F+ F+D+D VDK+
Sbjct: 141 YFGKYGKINAIEIISDRESGRKRGFGFVTFDDHDPVDKL 179
Score = 36.6 bits (83), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/92 (25%), Positives = 42/92 (45%), Gaps = 7/92 (7%)
Query: 51 KAMEEAQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQF 109
+ M +A + + P +K + N +K+FVGGL + E+ L Y+ Q+
Sbjct: 1 RKMAQATKRSKKETSTSDPSERNKRD------NEKFRKLFVGGLSSETTEETLWNYYRQW 54
Query: 110 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
G + ++ + + R FAF+ F+ VD
Sbjct: 55 GYLTDCVVIRDPASQTSRRFAFVTFSSMAEVD 86
>gi|328724063|ref|XP_001946404.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 87F-like
[Acyrthosiphon pisum]
Length = 290
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 60 EEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLKDQEEDDLREYFSQFGTIESVNMVT 119
EV+ + PP EI K + + ++FV G+K+Q E+DL EYF +FG I + +VT
Sbjct: 78 REVETKRAVPPD----EIKKSDTTVSANRIFVTGIKNQSENDLLEYFGKFGNITKITIVT 133
Query: 120 NKETGAKRGFAFIEFNDYDVVDK 142
+K G +RGF FIE++D D VDK
Sbjct: 134 DK-GGQRRGFGFIEYDDTDSVDK 155
Score = 36.2 bits (82), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 87 KKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
+K+F+GGL DD L+ +F Q+G I ++ + ++ R F FI ++ +VD+
Sbjct: 10 RKLFIGGLDFTTTDDSLKAFFEQWGKIVDYVVIKDPKSKRSRRFGFITYSQSSMVDQ 66
>gi|198428311|ref|XP_002127222.1| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein A3
[Ciona intestinalis]
Length = 359
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 62/103 (60%), Gaps = 16/103 (15%)
Query: 57 QSEEEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLR 103
++EEE D + PH + + E KP A+ VKK+F+GG+K+ +E+ LR
Sbjct: 60 ETEEEADACMDDRPHTLDSRTIDVKRAVSREESSKPGAHVQVKKIFIGGVKEGCDENALR 119
Query: 104 EYFSQF---GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
EYF+ F IESV + ++ET +GFAF+ F+D+DVVDK+
Sbjct: 120 EYFNTFTGNARIESVEIPLDRETTRPKGFAFVTFDDFDVVDKL 162
Score = 36.6 bits (83), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 78 GKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
GK E + +K+FVGG+ D +D + YFS++G + + V ++ G +GF F+ F
Sbjct: 6 GKEEEQS--RKLFVGGINHDTTDDGMSAYFSKYGNV--TDCVVIRDNGRSKGFGFVTF 59
>gi|444730345|gb|ELW70732.1| Chromodomain-helicase-DNA-binding protein 2 [Tupaia chinensis]
Length = 976
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 14/96 (14%)
Query: 61 EVDMEIPGPPHMDKLEIGKPE------------ANATVKKMFVGGLKDQ-EEDDLREYFS 107
EVD + PH + +P+ A+ TVKK+FVGG+K++ EE LR+ F
Sbjct: 511 EVDAAMNAKPHKVDGRVVEPKRAVSREDSQRLGAHLTVKKIFVGGIKEETEEHHLRDDFE 570
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G E + ++T++ +G KRGFAF+ F+D+D VDKI
Sbjct: 571 QYGKTEVIKIMTDRGSG-KRGFAFVNFDDHDSVDKI 605
>gi|148686992|gb|EDL18939.1| mCG4402 [Mus musculus]
Length = 135
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 67/113 (59%), Gaps = 4/113 (3%)
Query: 60 EEVDMEIPGPPH--MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVN 116
EEVD + P + + + KP A+ VKK+FVG +K D EE ++R+YF + IE+V
Sbjct: 21 EEVDAAMCVEPKRAVSREDAVKPGAHLIVKKIFVGSIKEDMEEYNMRDYFENYDKIETVE 80
Query: 117 MVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYNIEF 168
++ ++++G RGF F F+D+D VDKI + N ++ V K + K ++F
Sbjct: 81 VMEDRQSGKTRGFTFATFDDHDTVDKIAVQKYHTINGHNCEVKKALSKQEMQF 133
>gi|441642329|ref|XP_004090435.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A1-like 2-like [Nomascus leucogenys]
Length = 503
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A T++K+FV G+K D EE LR+YF Q+G IE + ++T+ +G K+GFAFI F D
Sbjct: 284 RPGACLTMEKVFVAGIKEDTEEHHLRDYFEQYGKIEVIKIMTDXGSGKKKGFAFISFGDD 343
Query: 138 DVVDKI 143
D +DKI
Sbjct: 344 DSMDKI 349
>gi|194741288|ref|XP_001953121.1| GF17369 [Drosophila ananassae]
gi|190626180|gb|EDV41704.1| GF17369 [Drosophila ananassae]
Length = 419
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/56 (55%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 88 KMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
K+F+GGLKD +E +REYFSQFG I SV ++ +K+TG KRGF F+EF D D+
Sbjct: 150 KIFLGGLKDCHDESSIREYFSQFGGITSVKLLLDKDTGRKRGFGFLEFEDSASADQ 205
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 81 EANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
E + ++K+F+GGL Q + +RE+F QFG + ++ + T RGF F+ + D +
Sbjct: 42 EGDEHLRKIFIGGLSTQTTVETVREFFRQFGAVADAVVMRDPMTNHSRGFGFVTYVDGNS 101
Query: 140 VDKIR 144
V+ ++
Sbjct: 102 VENVQ 106
>gi|426370462|ref|XP_004052183.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Gorilla gorilla gorilla]
Length = 326
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 13/97 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A TVKK+FV G+K D EE LR+Y+
Sbjct: 66 EEVDAAMNARPHKVGGRVVEPKVAVSREDSQRPGAYLTVKKIFVSGIKEDTEEHPLRDYY 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
Q+G E + ++T++ +G KR FAF+ F+++D DKI
Sbjct: 126 EQYGKTEVIEIMTDQGSGKKRDFAFVTFDNHDSTDKI 162
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL+ + D+ LR + Q+GT+ ++++ T RGF F+ +
Sbjct: 7 PKEPKQLRKLFIGGLRFETSDESLRSHSEQWGTLTECVVMSDPNTNRSRGFGFVTCATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|431838846|gb|ELK00775.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Pteropus alecto]
Length = 106
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 47/62 (75%), Gaps = 1/62 (1%)
Query: 83 NATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+ TVKK+FVGG+K D EE ++YF ++G I+++ ++ ++++G KRGF F+ F+D+D D
Sbjct: 33 DITVKKLFVGGIKEDTEEHHFKDYFEEYGKIDTIEIIIDRQSGKKRGFGFVTFDDHDPAD 92
Query: 142 KI 143
KI
Sbjct: 93 KI 94
>gi|157108578|ref|XP_001650293.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108879258|gb|EAT43483.1| AAEL005049-PA [Aedes aegypti]
Length = 287
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 50/76 (65%), Gaps = 6/76 (7%)
Query: 87 KKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRG 145
+K+FVGGL K+ E DLR +F Q+G IESVN+ T+ +TG RGFAFI FN + +DK+
Sbjct: 27 RKLFVGGLSKETTEQDLRNHFGQYGEIESVNVKTDPQTGRSRGFAFIIFNSPESIDKV-- 84
Query: 146 FAFIEFNDYDVVDKIV 161
+ F D+ V K V
Sbjct: 85 ---VAFEDHTVNGKKV 97
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL + D+ ++ +F QFG + + M +K ++GF FI ++ V
Sbjct: 101 KAKARQGKIFVGGLSPETSDEEVKTFFEQFGNVVEMEMPFDKMKNQRKGFCFITYDSEAV 160
Query: 140 VDKI 143
V ++
Sbjct: 161 VTEL 164
>gi|402587322|gb|EJW81257.1| heterogeneous nuclear ribonucleoprotein A1, partial [Wuchereria
bancrofti]
Length = 333
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 13/96 (13%)
Query: 61 EVDMEIPGPPHM------------DKLEIGKPEANATVKKMFVGGLKDQEEDDLRE-YFS 107
+VD + PH+ + + + EAN + K+++V G++++ + + E YFS
Sbjct: 76 QVDAAMAARPHVIDGKTVDPKRAVPRDQSARSEANVSSKRLYVSGVREEHTEQMFEDYFS 135
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
QFG + V ++ +K TG RGFAFI F+DYD VDK
Sbjct: 136 QFGKVLKVEIIADKNTGKPRGFAFISFDDYDPVDKC 171
Score = 39.3 bits (90), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 87 KKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
+KMF+GGL D+ L+E++SQ+G + ++ + T RGF F+ F+
Sbjct: 10 RKMFIGGLSATTTDEALKEFYSQWGELVDCIVMRDPATKRSRGFGFVSFS 59
>gi|225708562|gb|ACO10127.1| Heterogeneous nuclear ribonucleoprotein A0 [Osmerus mordax]
Length = 308
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
P NA VKK+FVGGLKD ED+ L EYF+QFG ++ +++ KETG KRGF F+ F
Sbjct: 92 PVINAKVKKIFVGGLKDDIEDEHLTEYFTQFGEVQKAEVISEKETGKKRGFGFVHF 147
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 84 ATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
A + K+FVGGL D + D LR++F QFG + +V N++ R F F+ +
Sbjct: 5 AKICKLFVGGLNVDTDNDGLRKHFEQFGELTDCAVVMNQQLQRSRCFGFVTY 56
>gi|410914421|ref|XP_003970686.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A0-like
[Takifugu rubripes]
Length = 300
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 60 EEVDMEIPGPPHM------------DKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYF 106
EE D + PH+ + + PE A VKK+FVGG++D E L +YF
Sbjct: 58 EEADTAMAASPHVVDGHNVELKRAVARQDADNPEVLANVKKIFVGGVQDHIEAQHLTDYF 117
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
SQFG +E ++++K TG KRGF F+ F D D K
Sbjct: 118 SQFGAVEKAEIISDKLTGKKRGFGFVFFVDTDSATK 153
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 83 NATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
+ + K+FVGGL Q D+ LR+YF ++G + +V N + G R F FI ++
Sbjct: 2 STALTKLFVGGLNVQTNDEGLRQYFEKYGQLSDCVVVMNNQLGRSRCFGFITYS 55
>gi|312083052|ref|XP_003143700.1| hypothetical protein LOAG_08120 [Loa loa]
Length = 294
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 47/68 (69%), Gaps = 1/68 (1%)
Query: 76 EIGKPEANATVKKMFVGGLKDQEEDDLRE-YFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
+ + EAN + K+++V G++++ + + E YFSQFG + V ++ +K TG RGFAFI F
Sbjct: 89 QSARSEANVSSKRLYVSGVREEHTEQMFEDYFSQFGKVLKVEIIADKNTGKPRGFAFISF 148
Query: 135 NDYDVVDK 142
+DYD VDK
Sbjct: 149 DDYDPVDK 156
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 87 KKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIE 133
+KMF+GGL D+ L+E++SQ+G + ++ + T RGF F++
Sbjct: 17 RKMFIGGLSATTTDEALKEFYSQWGELVDCIVMRDPATKRSRGFGFVD 64
>gi|170586938|ref|XP_001898236.1| heterogeneous ribonuclear particle protein [Brugia malayi]
gi|158594631|gb|EDP33215.1| heterogeneous ribonuclear particle protein, putative [Brugia
malayi]
Length = 319
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 47/69 (68%), Gaps = 1/69 (1%)
Query: 76 EIGKPEANATVKKMFVGGLKDQEEDDLRE-YFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
+ + EAN + K+++V G++++ + + E YFSQFG + V ++ +K TG RGFAFI F
Sbjct: 89 QSARSEANVSSKRLYVSGVREEHTEQMFEDYFSQFGKVLKVEIIADKNTGKPRGFAFISF 148
Query: 135 NDYDVVDKI 143
+DYD VDK
Sbjct: 149 DDYDPVDKC 157
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 30/48 (62%), Gaps = 1/48 (2%)
Query: 87 KKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIE 133
+KMF+GGL D+ L+E++SQ+G + ++ + T RGF F++
Sbjct: 17 RKMFIGGLSATTTDEALKEFYSQWGELVDCIVMRDPATKRSRGFGFVD 64
>gi|148664549|gb|EDK96965.1| mCG123153 [Mus musculus]
Length = 153
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 52/85 (61%), Gaps = 13/85 (15%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + +P A+ TVKK+FVGG+K D EE LR+YF
Sbjct: 66 EEVDAAMNARPHKVDGRVVEPKRAVSREDSQRPGAHLTVKKIFVGGIKEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAF 131
Q+G IE + ++T++ +G KRGFAF
Sbjct: 126 EQYGKIEVIEIMTDRGSGKKRGFAF 150
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
Query: 80 PEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ ++K+F+GGL + D+ LR +F Q+GT+ ++ + T RGF F+ + +
Sbjct: 7 PKEPEQLRKLFIGGLSFETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVE 66
Query: 139 VVD 141
VD
Sbjct: 67 EVD 69
>gi|312083050|ref|XP_003143699.1| heterogeneous ribonuclear particle protein [Loa loa]
Length = 349
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 56/97 (57%), Gaps = 13/97 (13%)
Query: 59 EEEVDMEIPGPPHM------------DKLEIGKPEANATVKKMFVGGLKDQEEDDL-REY 105
+ EVD + PH+ + + + EAN + K+++V G++++ +D+ +E+
Sbjct: 77 QSEVDAAMANRPHIIDGKTVDPKRAVPREQSQRSEANISSKRLYVSGVREEHTEDMFKEH 136
Query: 106 FSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
F ++G I ++ +K TG RGFAFI F+DYD VDK
Sbjct: 137 FGKYGNILKCEIIADKNTGKPRGFAFITFDDYDAVDK 173
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+KMF+GGL D+ L+E++S++GT+ ++ + T RGF F+ F+ VD
Sbjct: 26 RKMFIGGLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEVD 81
>gi|402585407|gb|EJW79347.1| heterogeneous nuclear ribonucleoprotein A1 [Wuchereria bancrofti]
Length = 322
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 56/97 (57%), Gaps = 13/97 (13%)
Query: 59 EEEVDMEIPGPPHM------------DKLEIGKPEANATVKKMFVGGLKDQEEDDL-REY 105
+ EVD + PH+ + + + EAN + K+++V G++++ +D+ +E+
Sbjct: 50 QSEVDAAMANRPHIIDGKTVDPKRAVPREQSQRSEANISSKRLYVSGVREEHTEDMFKEH 109
Query: 106 FSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
F ++G I ++ +K TG RGFAFI F+DYD VDK
Sbjct: 110 FGKYGNILKCEIIADKNTGKPRGFAFITFDDYDAVDK 146
Score = 39.3 bits (90), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 89 MFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
MF+GGL D+ L+E++S++GT+ ++ + T RGF F+ F+ VD
Sbjct: 1 MFIGGLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEVD 54
>gi|195500854|ref|XP_002097552.1| GE24427 [Drosophila yakuba]
gi|194183653|gb|EDW97264.1| GE24427 [Drosophila yakuba]
Length = 430
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/56 (51%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Query: 88 KMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
K+F+GGLKD +E +REYFSQFG + +V ++ +K+TG KRGF F+EF D +K
Sbjct: 137 KIFLGGLKDFHDEKTVREYFSQFGAVATVKLLMDKDTGRKRGFGFLEFEDPSSAEK 192
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 37/63 (58%), Gaps = 4/63 (6%)
Query: 86 VKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND---YDVVD 141
++K+F+GGL Q D LRE+FSQFG++ ++ + RGF F+ + D ++V
Sbjct: 31 LRKIFIGGLSTQTTMDTLREFFSQFGSVADAVVMRDPVNNHSRGFGFVTYVDPKSIEIVQ 90
Query: 142 KIR 144
K R
Sbjct: 91 KAR 93
>gi|149021005|gb|EDL78612.1| rCG55925 [Rattus norvegicus]
Length = 195
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 58/100 (58%), Gaps = 18/100 (18%)
Query: 60 EEVDMEIPGPPH---------------MDKLEIGKPEANATVKKMFVGGL-KDQEEDDLR 103
EEVD + PH M+K + +P A T+KK+ VGG+ +D EE LR
Sbjct: 30 EEVDATMNARPHKVGGRVVGPKRVSCGMEKSQ--RPGAPLTMKKVLVGGINEDTEEHHLR 87
Query: 104 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+YF +G E + ++T++ + KRGFAF+ F+D+D VDKI
Sbjct: 88 DYFEWYGKTEVIEIMTDRGSVKKRGFAFVTFDDHDSVDKI 127
>gi|393911994|gb|EFO20372.2| heterogeneous ribonuclear particle protein [Loa loa]
Length = 344
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 56/98 (57%), Gaps = 13/98 (13%)
Query: 59 EEEVDMEIPGPPHM------------DKLEIGKPEANATVKKMFVGGLKDQEEDDL-REY 105
+ EVD + PH+ + + + EAN + K+++V G++++ +D+ +E+
Sbjct: 72 QSEVDAAMANRPHIIDGKTVDPKRAVPREQSQRSEANISSKRLYVSGVREEHTEDMFKEH 131
Query: 106 FSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
F ++G I ++ +K TG RGFAFI F+DYD VDK
Sbjct: 132 FGKYGNILKCEIIADKNTGKPRGFAFITFDDYDAVDKC 169
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+KMF+GGL D+ L+E++S++GT+ ++ + T RGF F+ F+ VD
Sbjct: 21 RKMFIGGLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEVD 76
>gi|444511805|gb|ELV09942.1| Heterogeneous nuclear ribonucleoproteins A2/B1 [Tupaia chinensis]
Length = 235
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 7/90 (7%)
Query: 61 EVDMEIPGPPHMD-------KLEIGKPEANATVKKMFVGGLKDQEEDDLREYFSQFGTIE 113
EVD+ + PH K + + E + ++ G +D EE LR+YF ++GTI+
Sbjct: 22 EVDVAMAARPHSTDGRTDEPKYAVAREEGSCNCEEAICGIKEDTEEHHLRDYFEEYGTID 81
Query: 114 SVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
++ + T++++G K F F+ F+DYD VDKI
Sbjct: 82 TIEITTDRQSGKKERFGFVPFDDYDPVDKI 111
>gi|195036932|ref|XP_001989922.1| GH19059 [Drosophila grimshawi]
gi|193894118|gb|EDV92984.1| GH19059 [Drosophila grimshawi]
Length = 391
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 60/106 (56%), Gaps = 13/106 (12%)
Query: 34 VEAGVLE-VVTTRPTI-NNKAMEEAQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFV 91
VEA +E V TRP I + K +E ++ P H +G +N K+F+
Sbjct: 96 VEAASVENVQRTRPHIVDGKTVETKRAF---------PRHQFSKSMGH-LSNIRTNKIFI 145
Query: 92 GGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 136
GGL+D +E LREYF+QFG I SV ++ +KETG RGF F+EF D
Sbjct: 146 GGLRDCHDETTLREYFAQFGNINSVKVLLDKETGRIRGFGFLEFED 191
>gi|393911995|gb|EJD76539.1| heterogeneous ribonuclear particle protein, variant [Loa loa]
Length = 317
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 56/98 (57%), Gaps = 13/98 (13%)
Query: 59 EEEVDMEIPGPPHM------------DKLEIGKPEANATVKKMFVGGLKDQEEDDL-REY 105
+ EVD + PH+ + + + EAN + K+++V G++++ +D+ +E+
Sbjct: 72 QSEVDAAMANRPHIIDGKTVDPKRAVPREQSQRSEANISSKRLYVSGVREEHTEDMFKEH 131
Query: 106 FSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
F ++G I ++ +K TG RGFAFI F+DYD VDK
Sbjct: 132 FGKYGNILKCEIIADKNTGKPRGFAFITFDDYDAVDKC 169
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+KMF+GGL D+ L+E++S++GT+ ++ + T RGF F+ F+ VD
Sbjct: 21 RKMFIGGLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEVD 76
>gi|324510912|gb|ADY44557.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Ascaris suum]
Length = 323
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 79 KPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+ EAN + K+++V G++++ E L EYF +FGT+ ++ +K TG RGFAFI F+DY
Sbjct: 105 RTEANVSSKRLYVSGIREEHTEQMLEEYFGKFGTVIKAEIINDKNTGKPRGFAFITFDDY 164
Query: 138 DVVDK 142
D VDK
Sbjct: 165 DPVDK 169
Score = 38.9 bits (89), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+KMF+GGL D+ L+E++S++G + ++ + T RGF F+ + +VD
Sbjct: 22 RKMFIGGLSSATTDESLKEFYSKWGELIDCIVMKDPTTKRSRGFGFVSYTKQSMVD 77
>gi|109102812|ref|XP_001104065.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Macaca mulatta]
Length = 258
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 55/96 (57%), Gaps = 13/96 (13%)
Query: 60 EEVDMEIPGPPHMDKLEIGKPE------------ANATVKKMFVGGL-KDQEEDDLREYF 106
EEVD I PH + +P+ A+ TVKK+FVGG+ +D EE LR+YF
Sbjct: 66 EEVDAAINARPHKVDGRVMEPKRPVSREDYERSGAHLTVKKIFVGGINEDTEEHHLRDYF 125
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
QFG I+ ++T++ + KR F F+ F+D+D DK
Sbjct: 126 EQFGKIKMTEIMTDQGSDKKRDFDFVTFDDHDSRDK 161
>gi|324505861|gb|ADY42513.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 357
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 79 KPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+ EAN + K+++V G++++ E L EYF +FGT+ ++ +K TG RGFAFI F+DY
Sbjct: 105 RTEANVSSKRLYVSGIREEHTEQMLEEYFGKFGTVIKAEIINDKNTGKPRGFAFITFDDY 164
Query: 138 DVVDK 142
D VDK
Sbjct: 165 DPVDK 169
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+KMF+GGL D+ L+E++S++G + ++ + T RGF F+ + +VD
Sbjct: 22 RKMFIGGLSSATTDESLKEFYSKWGELIDCIVMKDPTTKRSRGFGFVSYTKQSMVD 77
>gi|324504581|gb|ADY41977.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 345
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 79 KPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+ EAN + K+++V G++++ E L EYF +FGT+ ++ +K TG RGFAFI F+DY
Sbjct: 105 RTEANVSSKRLYVSGIREEHTEQMLEEYFGKFGTVIKAEIINDKNTGKPRGFAFITFDDY 164
Query: 138 DVVDK 142
D VDK
Sbjct: 165 DPVDK 169
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+KMF+GGL D+ L+E++S++G + ++ + T RGF F+ + +VD
Sbjct: 22 RKMFIGGLSSATTDESLKEFYSKWGELIDCIVMKDPTTKRSRGFGFVSYTKQSMVD 77
>gi|355745396|gb|EHH50021.1| hypothetical protein EGM_00780, partial [Macaca fascicularis]
Length = 263
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 54/96 (56%), Gaps = 13/96 (13%)
Query: 60 EEVDMEIPGPPHMDKLEIGKPE------------ANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + +P+ A VKK+FVGG+K D EE LR+Y
Sbjct: 63 EEVDAAMNARPHKLDGRVVEPKRAVSREDSQRSGARLAVKKIFVGGIKEDTEEHHLRDYS 122
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
Q+G E ++T++ + KRGFAFI F+D+D VDK
Sbjct: 123 EQYGKTEVTEIMTDRGSVKKRGFAFIPFDDHDFVDK 158
>gi|170586940|ref|XP_001898237.1| heterogeneous ribonuclear particle protein [Brugia malayi]
gi|158594632|gb|EDP33216.1| heterogeneous ribonuclear particle protein, putative [Brugia
malayi]
Length = 314
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 56/97 (57%), Gaps = 13/97 (13%)
Query: 59 EEEVDMEIPGPPHM------------DKLEIGKPEANATVKKMFVGGLKDQEEDDL-REY 105
+ EVD + PH+ + + + EAN + K+++V G++++ +D+ +E+
Sbjct: 80 QSEVDAAMANRPHIIDGKTVDPKRAVPREQSQRSEANISSKRLYVSGVREEHTEDMFKEH 139
Query: 106 FSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
F ++G I ++ +K TG RGFAFI F+DYD VDK
Sbjct: 140 FGKYGNILKCEIIADKNTGKPRGFAFITFDDYDAVDK 176
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+KMF+GGL D+ L+E++S++GT+ ++ + T RGF F+ F+ VD
Sbjct: 29 RKMFIGGLTSSTTDETLKEFYSKWGTLVDCVVMRDPATKRSRGFGFVSFSKQSEVD 84
>gi|324520993|gb|ADY47759.1| Heterogeneous nuclear ribonucleoprotein A1, partial [Ascaris suum]
Length = 339
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 79 KPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+ EAN + K+++V G++++ E L EYF +FGT+ ++ +K TG RGFAFI F+DY
Sbjct: 99 RTEANVSSKRLYVSGIREEHTEQMLEEYFGKFGTVIKAEIINDKNTGKPRGFAFITFDDY 158
Query: 138 DVVDK 142
D VDK
Sbjct: 159 DPVDK 163
Score = 38.5 bits (88), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+KMF+GGL D+ L+E++S++G + ++ + T RGF F+ + +VD
Sbjct: 16 RKMFIGGLSSATTDESLKEFYSKWGELIDCIVMKDPTTKRSRGFGFVSYTKQSMVD 71
>gi|324514790|gb|ADY45988.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 319
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%), Gaps = 1/65 (1%)
Query: 79 KPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+ EAN + K+++V G++++ E L EYF +FGT+ ++ +K TG RGFAFI F+DY
Sbjct: 79 RTEANVSSKRLYVSGIREEHTEQMLEEYFGKFGTVIKAEIINDKNTGKPRGFAFITFDDY 138
Query: 138 DVVDK 142
D VDK
Sbjct: 139 DPVDK 143
>gi|328711026|ref|XP_001943905.2| PREDICTED: hypothetical protein LOC100169433 [Acyrthosiphon pisum]
Length = 530
Score = 65.1 bits (157), Expect = 1e-08, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+A + KK+FVGG+ +D D+++ YFSQFG +E M+ ++ T RGF F+ F +
Sbjct: 298 RPKAGSKTKKIFVGGVSQDTTADEVKAYFSQFGKVEETVMLMDQHTKRHRGFGFVTFEND 357
Query: 138 DVVDKI 143
D+VD I
Sbjct: 358 DIVDTI 363
Score = 50.4 bits (119), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 84 ATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
T K+FVGGL Q D L++YF FG + +V ++ + T RGF FI F+D + V+K
Sbjct: 215 GTSAKLFVGGLSWQTSADKLKQYFGMFGDVTNVLIMKDPITQRSRGFGFITFSDAETVEK 274
Query: 143 I 143
+
Sbjct: 275 V 275
>gi|195112196|ref|XP_002000660.1| GI22407 [Drosophila mojavensis]
gi|193917254|gb|EDW16121.1| GI22407 [Drosophila mojavensis]
Length = 679
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P KK+FVGG+ +D D+++ YFSQFG +E M+ +++T RGF F+ F +
Sbjct: 306 RPRQANKTKKIFVGGVSQDTSADEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENE 365
Query: 138 DVVDKI 143
DVVD++
Sbjct: 366 DVVDRV 371
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q + L+EYF+ FGT+ V ++ + T RGF FI F + VDK+
Sbjct: 227 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKV 283
>gi|255710315|gb|ACU30977.1| RNA-binding protein musashi [Ochlerotatus triseriatus]
Length = 270
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 6/76 (7%)
Query: 87 KKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRG 145
+K+FVGGL K+ E DLR +F Q+G IESVN+ T+ +TG RGFAFI F + +DK+
Sbjct: 5 RKLFVGGLSKETAEQDLRNHFGQYGEIESVNIKTDPQTGRSRGFAFIIFKSPESIDKV-- 62
Query: 146 FAFIEFNDYDVVDKIV 161
+ F D+ + K V
Sbjct: 63 ---VAFEDHTINGKKV 75
Score = 35.4 bits (80), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K FVGGL + D+ ++ +F Q+G + + +K ++GF FI ++ V
Sbjct: 79 KAKARQGKTFVGGLSPETSDEEIKTFFEQYGNVVEMETPFDKMKNQRKGFCFITYDSEAV 138
Query: 140 VDKI 143
V ++
Sbjct: 139 VTEL 142
>gi|351703296|gb|EHB06215.1| Heterogeneous nuclear ribonucleoprotein A1-like protein 2
[Heterocephalus glaber]
Length = 195
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 47/59 (79%), Gaps = 1/59 (1%)
Query: 86 VKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+KK+F+G +K D EE +LR++F + G IE++ ++ ++E+G KRGFAF+ F+D+D VDKI
Sbjct: 1 MKKIFIGSIKEDTEEYNLRDHFEKCGKIETIEVMEDRESGKKRGFAFVTFDDHDTVDKI 59
>gi|47182330|emb|CAG14268.1| unnamed protein product [Tetraodon nigroviridis]
Length = 197
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 43/64 (67%), Gaps = 1/64 (1%)
Query: 80 PEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
PE A VKK+FVGG++D E + L +YFSQFG +E ++++K TG KRGF F+ F D D
Sbjct: 14 PEVLANVKKIFVGGVQDHVEAEHLTDYFSQFGAVEKAEIISDKLTGKKRGFGFVFFVDTD 73
Query: 139 VVDK 142
K
Sbjct: 74 SATK 77
>gi|328708038|ref|XP_001949057.2| PREDICTED: hypothetical protein LOC100160789 [Acyrthosiphon pisum]
Length = 401
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 53/93 (56%), Gaps = 12/93 (12%)
Query: 62 VDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLKDQEEDDLREYFSQF 109
VD + PH + + +I KP + VKKMF+ G+K+Q E +L EYF +F
Sbjct: 73 VDRAMSNGPHNVNGRNVETKRAVSRDDIDKPNSKIAVKKMFIYGIKEQSEINLVEYFKKF 132
Query: 110 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
G I + +VT K +G ++G+ FIE+++ VD+
Sbjct: 133 GNIIHIKIVTAKNSGERKGYGFIEYDNTISVDQ 165
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Query: 76 EIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
E+G E T +K+F+GGL ED LR F +G I V ++ + T RGF F+ +
Sbjct: 9 EVGYLEPVQT-RKLFIGGLDYSATEDSLRNTFEVWGEIVDVVVIKDPITKRSRGFGFVIY 67
Query: 135 NDYDVVDK 142
+ +VD+
Sbjct: 68 SKSSMVDR 75
>gi|195453885|ref|XP_002073986.1| GK12850 [Drosophila willistoni]
gi|194170071|gb|EDW84972.1| GK12850 [Drosophila willistoni]
Length = 641
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P KK+FVGG+ +D D+++ YFSQFG +E M+ +++T RGF F+ F +
Sbjct: 279 RPRQANKTKKIFVGGVSQDTSADEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENE 338
Query: 138 DVVDKI 143
DVVD++
Sbjct: 339 DVVDRV 344
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q + L+EYF+ FGT+ V ++ + T RGF FI F + VDK+
Sbjct: 200 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKV 256
>gi|194901404|ref|XP_001980242.1| GG17034 [Drosophila erecta]
gi|190651945|gb|EDV49200.1| GG17034 [Drosophila erecta]
Length = 427
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/56 (50%), Positives = 40/56 (71%), Gaps = 1/56 (1%)
Query: 88 KMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
K+F+GGLKD +E +REYFSQFG + ++ + +K+TG KRGF F+EF D +K
Sbjct: 137 KIFIGGLKDFHDEKTVREYFSQFGAVATMELFMDKDTGRKRGFGFLEFQDPSSTEK 192
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 86 VKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIR 144
++K+FVGGL Q D LRE+FSQFG++ ++ + T RGF F+ + D ++ ++
Sbjct: 31 LRKIFVGGLSTQTTMDTLREFFSQFGSVADAVVMRDPITNHSRGFGFVTYVDPKSIEIVQ 90
>gi|344284992|ref|XP_003414248.1| PREDICTED: hypothetical protein LOC100654996 [Loxodonta africana]
Length = 595
Score = 63.5 bits (153), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 50 NKAMEEAQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQ 108
+K M+ Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF
Sbjct: 392 DKVMD--QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGG 444
Query: 109 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
FG +ES+ + + +T +RGF FI F + + V KI
Sbjct: 445 FGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKI 479
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 66 IPGPPHMDKLEIGKPEANATVK--KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKE 122
+P P H + A A + KMF+GGL D + DL++YFS+FG + + +
Sbjct: 314 MPLPSHSNSSPRHTEAATAQREEWKMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPI 373
Query: 123 TGAKRGFAFIEFNDYDVVDKI 143
TG RGF F+ F + + VDK+
Sbjct: 374 TGRSRGFGFVLFKESESVDKV 394
>gi|189241054|ref|XP_968171.2| PREDICTED: similar to CG32169 CG32169-PA [Tribolium castaneum]
Length = 525
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 41 VVTTRPTINNKAMEEAQSE---EEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLKDQ 97
+ T P +K + + E +++D ++ P P+ KK+FVGGL
Sbjct: 168 ITFTDPASVDKVLAQGTHELDGKKIDPKVAFPRR------AHPKMVTRTKKIFVGGLSAP 221
Query: 98 EE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
+D++ YF QFG IE ++ +K+T RGF F+ F DVVDK+ F E N+
Sbjct: 222 TTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCEIHFHEINN 278
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKP-EANATVKKMFVGGLKDQEE-DDLREYFSQFGTIE 113
+Q + D ++ P + + + G P E KMF+GGL Q + LREYFS++G I
Sbjct: 90 SQYRVDSDADVMEPQNQEIVASGSPAEVPNDPGKMFIGGLSWQTSPESLREYFSKYGDIT 149
Query: 114 SVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
V ++ + T RGF FI F D VDK+
Sbjct: 150 EVMVMKDPATRRSRGFGFITFTDPASVDKV 179
>gi|321475556|gb|EFX86518.1| hypothetical protein DAPPUDRAFT_44313 [Daphnia pulex]
Length = 195
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 69 PPHMDKLEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKR 127
P H GK ++ KK+FVGG+ +D D+++ YF+QFG +E M+ +++T R
Sbjct: 95 PKHATPKNKGKATPSSKTKKVFVGGVSQDTSADEVKAYFNQFGRVEEAVMLMDQQTKRHR 154
Query: 128 GFAFIEFNDYDVVDKI 143
GF F+ F DVVD+I
Sbjct: 155 GFGFVTFESEDVVDRI 170
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q D LREYF Q+GTI V ++ + T RGF FI F + VD++
Sbjct: 24 KLFVGGLSWQTSADKLREYFGQYGTIIDVQVLKDPLTQRSRGFGFITFAEASSVDRV 80
>gi|443691822|gb|ELT93572.1| hypothetical protein CAPTEDRAFT_180669 [Capitella teleta]
Length = 243
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL DD+++YF QFG IE ++ +K T RGFAF+ F +
Sbjct: 109 QPKLVTKTKKIFVGGLSASTTVDDVKQYFEQFGKIEDAMLMFDKATQRHRGFAFVTFENE 168
Query: 138 DVVDKIRGFAFIEFND 153
DVVDK+ F E N+
Sbjct: 169 DVVDKVCEIHFHEINN 184
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q + LREYF+++G I ++ + T RGF F+ F+D VDK+
Sbjct: 25 KMFIGGLSWQTTPEGLREYFAKYGEISECMVMRDPITKRSRGFGFVTFSDPASVDKV 81
>gi|358339324|dbj|GAA47410.1| RNA-binding protein Musashi [Clonorchis sinensis]
Length = 957
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 9/106 (8%)
Query: 60 EEVDMEIPGPPH-MDKLEIGKPEANATVK-------KMFVGGLK-DQEEDDLREYFSQFG 110
E V + + PH +D E+ + N +K K+FVGG+ DQ+ + ++ YF QFG
Sbjct: 62 ESVTLALEAKPHILDGKEVDAKQCNVNMKGRNRRSLKVFVGGIGLDQDAESIKNYFRQFG 121
Query: 111 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV 156
+ VN++ + RGFAF+ F D VV ++ ++ N+ V
Sbjct: 122 RVTDVNLMMDSNKQRHRGFAFVGFEDEAVVKRLISLHYVTMNNKQV 167
Score = 44.3 bits (103), Expect = 0.016, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 86 VKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVV 140
+ K+FVGGL + LR YFS+FG ++ ++ + +TG RGF ++++ + + V
Sbjct: 9 IGKLFVGGLSQATNNGSLRLYFSRFGEVDDAVVMMDNKTGRSRGFGYVKYREPESV 64
>gi|388329666|gb|AFK29221.1| musashi-PA [Drosophila buzzatii]
Length = 671
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P KK+FVGG+ +D ++++ YFSQFG +E M+ +++T RGF F+ F +
Sbjct: 301 RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENE 360
Query: 138 DVVDKI 143
DVVD++
Sbjct: 361 DVVDRV 366
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q + L+EYF+ FGT+ V ++ + T RGF FI F + VDK+
Sbjct: 222 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKV 278
>gi|388329663|gb|AFK29218.1| musashi-PB, partial [Drosophila buzzatii]
Length = 636
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P KK+FVGG+ +D ++++ YFSQFG +E M+ +++T RGF F+ F +
Sbjct: 266 RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENE 325
Query: 138 DVVDKI 143
DVVD++
Sbjct: 326 DVVDRV 331
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q + L+EYF+ FGT+ V ++ + T RGF FI F + VDK+
Sbjct: 187 KLFVGGLSWQTSSEKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKV 243
>gi|195036632|ref|XP_001989774.1| GH18982 [Drosophila grimshawi]
gi|193893970|gb|EDV92836.1| GH18982 [Drosophila grimshawi]
Length = 641
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P KK+FVGG+ +D ++++ YFSQFG +E M+ +++T RGF F+ F +
Sbjct: 279 RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGAVEETVMLMDQQTKRHRGFGFVTFENE 338
Query: 138 DVVDKI 143
DVVD++
Sbjct: 339 DVVDRV 344
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q D L+EYF+ FGT+ V ++ + T RGF FI F + VDK+
Sbjct: 200 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVDKV 256
>gi|347966951|ref|XP_321067.5| AGAP001993-PA [Anopheles gambiae str. PEST]
gi|333469826|gb|EAA01260.6| AGAP001993-PA [Anopheles gambiae str. PEST]
Length = 556
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 48/76 (63%), Gaps = 2/76 (2%)
Query: 69 PPHMDKLEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKR 127
P H K ++N T KK+FVGG+ +D ++++ YFSQFG +E M+ +++T R
Sbjct: 254 PKHATPKNRPKTQSNKT-KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHR 312
Query: 128 GFAFIEFNDYDVVDKI 143
GF F+ F + DVVD++
Sbjct: 313 GFGFVTFENEDVVDRV 328
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q + L EYF FGT+ V ++ + T RGF FI F + + VDK+
Sbjct: 183 KLFVGGLSWQTSSEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSVDKV 239
>gi|158296283|ref|XP_001237856.2| AGAP006668-PA [Anopheles gambiae str. PEST]
gi|157016437|gb|EAU76642.2| AGAP006668-PA [Anopheles gambiae str. PEST]
Length = 360
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + E DLRE+F Q+G IES+N+ T+ TG RGFAFI + D +DK+
Sbjct: 68 RKLFVGGLSWETTEKDLREHFGQYGEIESINVKTDPNTGRSRGFAFIVYKASDSIDKV 125
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 82 ANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVV 140
A A K+FVGGL D +++++ +F QFGTI V + +K+ ++GF FI + VV
Sbjct: 143 AKARPGKIFVGGLTSDISDEEIKTFFGQFGTIVEVELPFDKQKNQRKGFCFITYESVQVV 202
Query: 141 DKI 143
+++
Sbjct: 203 NEL 205
>gi|28571891|ref|NP_733108.2| musashi, isoform B [Drosophila melanogaster]
gi|386766502|ref|NP_001247303.1| musashi, isoform C [Drosophila melanogaster]
gi|442621134|ref|NP_001262960.1| musashi, isoform F [Drosophila melanogaster]
gi|28381465|gb|AAN14056.2| musashi, isoform B [Drosophila melanogaster]
gi|383292949|gb|AFH06620.1| musashi, isoform C [Drosophila melanogaster]
gi|383505544|gb|AFH36351.1| FI20028p1 [Drosophila melanogaster]
gi|440217893|gb|AGB96340.1| musashi, isoform F [Drosophila melanogaster]
Length = 634
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P KK+FVGG+ +D ++++ YFSQFG +E M+ +++T RGF F+ F +
Sbjct: 283 RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENE 342
Query: 138 DVVDKI 143
DVVD++
Sbjct: 343 DVVDRV 348
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q D L+EYF+ FGT+ V ++ + T RGF FI F + V+K+
Sbjct: 204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKV 260
>gi|195349467|ref|XP_002041266.1| GM10251 [Drosophila sechellia]
gi|194122961|gb|EDW45004.1| GM10251 [Drosophila sechellia]
Length = 634
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P KK+FVGG+ +D ++++ YFSQFG +E M+ +++T RGF F+ F +
Sbjct: 283 RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENE 342
Query: 138 DVVDKI 143
DVVD++
Sbjct: 343 DVVDRV 348
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q D L+EYF+ FGT+ V ++ + T RGF FI F + V+K+
Sbjct: 204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKV 260
>gi|21430706|gb|AAM51031.1| RH49436p [Drosophila melanogaster]
Length = 634
Score = 62.4 bits (150), Expect = 6e-08, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P KK+FVGG+ +D ++++ YFSQFG +E M+ +++T RGF F+ F +
Sbjct: 283 RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENE 342
Query: 138 DVVDKI 143
DVVD++
Sbjct: 343 DVVDRV 348
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q D L+EYF+ FGT+ V ++ + T RGF FI F + V+K+
Sbjct: 204 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKV 260
>gi|17864096|ref|NP_524577.1| musashi, isoform A [Drosophila melanogaster]
gi|541667|emb|CAA55897.1| musashi [Drosophila melanogaster]
gi|15291915|gb|AAK93226.1| LD31631p [Drosophila melanogaster]
gi|23172305|gb|AAF56478.2| musashi, isoform A [Drosophila melanogaster]
Length = 606
Score = 62.4 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P KK+FVGG+ +D ++++ YFSQFG +E M+ +++T RGF F+ F +
Sbjct: 255 RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENE 314
Query: 138 DVVDKI 143
DVVD++
Sbjct: 315 DVVDRV 320
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q D L+EYF+ FGT+ V ++ + T RGF FI F + V+K+
Sbjct: 176 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKV 232
>gi|220942596|gb|ACL83841.1| msi-PA [synthetic construct]
Length = 607
Score = 62.4 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P KK+FVGG+ +D ++++ YFSQFG +E M+ +++T RGF F+ F +
Sbjct: 255 RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENE 314
Query: 138 DVVDKI 143
DVVD++
Sbjct: 315 DVVDRV 320
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q D L+EYF+ FGT+ V ++ + T RGF FI F + V+K+
Sbjct: 176 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKV 232
>gi|442621132|ref|NP_001262959.1| musashi, isoform E [Drosophila melanogaster]
gi|440217892|gb|AGB96339.1| musashi, isoform E [Drosophila melanogaster]
Length = 618
Score = 62.4 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P KK+FVGG+ +D ++++ YFSQFG +E M+ +++T RGF F+ F +
Sbjct: 267 RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENE 326
Query: 138 DVVDKI 143
DVVD++
Sbjct: 327 DVVDRV 332
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q D L+EYF+ FGT+ V ++ + T RGF FI F + V+K+
Sbjct: 188 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKV 244
>gi|386766504|ref|NP_001247304.1| musashi, isoform D [Drosophila melanogaster]
gi|383292950|gb|AFH06621.1| musashi, isoform D [Drosophila melanogaster]
Length = 605
Score = 62.4 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P KK+FVGG+ +D ++++ YFSQFG +E M+ +++T RGF F+ F +
Sbjct: 254 RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENE 313
Query: 138 DVVDKI 143
DVVD++
Sbjct: 314 DVVDRV 319
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q D L+EYF+ FGT+ V ++ + T RGF FI F + V+K+
Sbjct: 175 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKV 231
>gi|194741664|ref|XP_001953309.1| GF17697 [Drosophila ananassae]
gi|190626368|gb|EDV41892.1| GF17697 [Drosophila ananassae]
Length = 634
Score = 62.4 bits (150), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P KK+FVGG+ +D ++++ YFSQFG +E M+ +++T RGF F+ F +
Sbjct: 285 RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENE 344
Query: 138 DVVDKI 143
DVVD++
Sbjct: 345 DVVDRV 350
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q D L+EYF+ FGT+ V ++ + T RGF FI F + V K+
Sbjct: 206 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVQKV 262
>gi|440586615|emb|CCK33029.1| RRM domain protein Musashi [Platynereis dumerilii]
Length = 205
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL +D+++YFSQFG IE ++ +K T RGFAF+ F
Sbjct: 108 QPKMVTRTKKIFVGGLSASTTLEDVKQYFSQFGKIEDAMLMFDKATQRHRGFAFVTFECE 167
Query: 138 DVVDKIRGFAFIEFND 153
DVVDK+ F E N+
Sbjct: 168 DVVDKVCEIHFHEINN 183
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 38/67 (56%), Gaps = 1/67 (1%)
Query: 78 GKPEANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 136
G E + KMFVGGL Q + LREYF+++G I+ ++ + T RGF F+ + D
Sbjct: 14 GNDEGHQDPGKMFVGGLSWQTTPEGLREYFTKYGEIKECMVMRDPITKRSRGFGFVTYAD 73
Query: 137 YDVVDKI 143
VDK+
Sbjct: 74 PGSVDKV 80
>gi|269914213|gb|ACZ52626.1| MIP15164p [Drosophila melanogaster]
Length = 578
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P KK+FVGG+ +D ++++ YFSQFG +E M+ +++T RGF F+ F +
Sbjct: 227 RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENE 286
Query: 138 DVVDKI 143
DVVD++
Sbjct: 287 DVVDRV 292
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q D L+EYF+ FGT+ V ++ + T RGF FI F + V+K+
Sbjct: 148 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKV 204
>gi|146197870|dbj|BAF57645.1| hnRNP A2/B1 protein [Dugesia japonica]
Length = 386
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 45/73 (61%), Gaps = 1/73 (1%)
Query: 72 MDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFA 130
M K E P+ + K++F+GG++ EDDL++YFS FG I + + +G RGFA
Sbjct: 94 MPKEESLNPDIHCNSKRIFIGGIRRFFTEDDLKDYFSTFGEIVDCTIKRDNVSGLSRGFA 153
Query: 131 FIEFNDYDVVDKI 143
FI F D D+VDK+
Sbjct: 154 FITFTDRDIVDKV 166
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 87 KKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRG 145
KK+FVGGL Q E D+R+YFS++G + V + +K RGF F+ F + + VD+ +
Sbjct: 18 KKIFVGGLPPQTTESDMRQYFSKYGDVCDVVAMRDKTGNKSRGFGFVVFKEAESVDRCQA 77
>gi|442621136|ref|NP_001262961.1| musashi, isoform H [Drosophila melanogaster]
gi|440217894|gb|AGB96341.1| musashi, isoform H [Drosophila melanogaster]
Length = 567
Score = 62.0 bits (149), Expect = 8e-08, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P KK+FVGG+ +D ++++ YFSQFG +E M+ +++T RGF F+ F +
Sbjct: 216 RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENE 275
Query: 138 DVVDKI 143
DVVD++
Sbjct: 276 DVVDRV 281
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q D L+EYF+ FGT+ V ++ + T RGF FI F + V+K+
Sbjct: 137 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKV 193
>gi|392350253|ref|XP_003750604.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein A1-like [Rattus norvegicus]
Length = 302
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 60 EEVDMEIPGPPHMDKLEIGKPEA-NATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNM 117
+VD P E+ + + + TVKK+FVGG+K D E LR+YF Q+G IE + +
Sbjct: 77 HKVDGRAVEPKRAVSREVSQRQGVHLTVKKIFVGGIKEDTAEYHLRDYFEQYGKIEVIEI 136
Query: 118 VTNKETGAKRGFAFIEFNDYDVVDKI 143
+T++ + KRGFAF+ + +D +DKI
Sbjct: 137 MTDRGSEKKRGFAFVTSDGHDXMDKI 162
>gi|259013338|ref|NP_001158364.1| musashi homolog 2 [Saccoglossus kowalevskii]
gi|32307763|gb|AAP79278.1| musashi nrp-1 [Saccoglossus kowalevskii]
Length = 394
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 50/80 (62%), Gaps = 7/80 (8%)
Query: 86 VKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIR 144
KK+FVGGL + DD++ +FSQ+G +E ++ +K+T RGF F+ F+ DVVDKI
Sbjct: 108 TKKIFVGGLSANTTADDIKNHFSQYGKVEEAQLMFDKQTNRHRGFGFVTFDSEDVVDKI- 166
Query: 145 GFAFIEFNDYDVVDKIV-CK 163
E + ++V K+V CK
Sbjct: 167 ----CEIHFHEVNSKMVECK 182
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 88 KMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
KMF+GGL Q D LREYFS+FG + ++ ++ T RGF FI F D V+K+
Sbjct: 22 KMFIGGLSWQTTPDGLREYFSKFGEVTECMVMRDQATKRSRGFGFITFRDPASVEKVLAQ 81
Query: 147 AFIEFNDYDVVDKIV 161
A E + + K+
Sbjct: 82 AAHELDQKKIDPKVA 96
>gi|195504299|ref|XP_002099019.1| GE23609 [Drosophila yakuba]
gi|194185120|gb|EDW98731.1| GE23609 [Drosophila yakuba]
Length = 637
Score = 62.0 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P KK+FVGG+ +D ++++ YFSQFG +E M+ +++T RGF F+ F +
Sbjct: 286 RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENE 345
Query: 138 DVVDKI 143
DVVD++
Sbjct: 346 DVVDRV 351
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q D L+EYF+ FGT+ V ++ + T RGF FI F + V+K+
Sbjct: 207 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKV 263
>gi|194908488|ref|XP_001981778.1| GG11413 [Drosophila erecta]
gi|190656416|gb|EDV53648.1| GG11413 [Drosophila erecta]
Length = 635
Score = 62.0 bits (149), Expect = 9e-08, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P KK+FVGG+ +D ++++ YFSQFG +E M+ +++T RGF F+ F +
Sbjct: 284 RPRQANKTKKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENE 343
Query: 138 DVVDKI 143
DVVD++
Sbjct: 344 DVVDRV 349
Score = 49.7 bits (117), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q D L+EYF+ FGT+ V ++ + T RGF FI F + V+K+
Sbjct: 205 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQEPCTVEKV 261
>gi|392342164|ref|XP_003754522.1| PREDICTED: LOW QUALITY PROTEIN: putative heterogeneous nuclear
ribonucleoprotein A1-like 3-like [Rattus norvegicus]
Length = 352
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 60 EEVDMEIPGPPHMDKLEIGKPEA-NATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNM 117
+VD P E+ + + + TVKK+FVGG+K D E LR+YF Q+G IE + +
Sbjct: 77 HKVDGRAVEPKRAVSREVSQRQGVHLTVKKIFVGGIKEDTAEYHLRDYFEQYGKIEVIEI 136
Query: 118 VTNKETGAKRGFAFIEFNDYDVVDKI 143
+T++ + KRGFAF+ + +D +DKI
Sbjct: 137 MTDRGSEKKRGFAFVTSDGHDXMDKI 162
>gi|157112076|ref|XP_001651782.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878175|gb|EAT42400.1| AAEL006057-PA [Aedes aegypti]
Length = 482
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 55/96 (57%), Gaps = 6/96 (6%)
Query: 69 PPHMDKLEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKR 127
P H K ++N T KK+FVGG+ +D +++R+YFSQFG ++ M+ +++T R
Sbjct: 174 PKHATPKNRPKTQSNKT-KKIFVGGVSQDTSAEEVRQYFSQFGKVDETVMLMDQQTKRHR 232
Query: 128 GFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDKIVCK 163
GF F+ F + DVVD++ F + K+ CK
Sbjct: 233 GFGFVTFENEDVVDRVCEIHFHTIKN----KKVECK 264
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q + L EYF FG + V ++ + T RGF FI F + + VDK+
Sbjct: 103 KLFVGGLSWQTSSEKLSEYFGMFGKVTDVLIMKDPITQRSRGFGFITFQEPNSVDKV 159
>gi|354497473|ref|XP_003510844.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cricetulus
griseus]
Length = 510
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 227 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 285
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 286 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 324
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 100 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ LREYF QFG ++ ++ + T RGF F+ F D VDK+
Sbjct: 182 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKV 225
>gi|297263669|ref|XP_001087753.2| PREDICTED: hypothetical protein LOC699286 [Macaca mulatta]
Length = 696
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 209 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 267
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 268 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 306
Score = 40.4 bits (93), Expect = 0.22, Method: Composition-based stats.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 102 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
LREYF QFG ++ ++ + T RGF F+ F D VDK+
Sbjct: 166 LREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKV 207
>gi|390178416|ref|XP_003736645.1| GA14206, isoform D [Drosophila pseudoobscura pseudoobscura]
gi|388859440|gb|EIM52718.1| GA14206, isoform D [Drosophila pseudoobscura pseudoobscura]
Length = 193
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + E +LR++F +FG IES+N+ T+ +TG RGFAFI F + + +DK+
Sbjct: 55 RKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 112
>gi|291407048|ref|XP_002719860.1| PREDICTED: musashi 1 [Oryctolagus cuniculus]
Length = 568
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 285 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 343
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 344 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 382
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 100 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ LREYF QFG ++ ++ + T RGF F+ F D VDK+
Sbjct: 240 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFADQAGVDKV 283
>gi|270001992|gb|EEZ98439.1| hypothetical protein TcasGA2_TC000928 [Tribolium castaneum]
Length = 344
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + D +LR++F Q+G IES+N+ T+ TG RGFAFI FN+ + +DK+
Sbjct: 59 RKLFVGGLSWETTDKELRDHFGQYGEIESINVKTDPNTGRSRGFAFIVFNNAEAIDKV 116
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL ++ +DD++ +FSQ+GTI V M +K ++GF FI F V
Sbjct: 133 KAKARHGKIFVGGLTNELSDDDIKNFFSQYGTIIEVEMPFDKTKNQRKGFCFITFESEQV 192
Query: 140 VDKI 143
V+++
Sbjct: 193 VNEL 196
>gi|91076876|ref|XP_976197.1| PREDICTED: similar to Bmsqd-2 isoform 3 [Tribolium castaneum]
Length = 323
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + D +LR++F Q+G IES+N+ T+ TG RGFAFI FN+ + +DK+
Sbjct: 59 RKLFVGGLSWETTDKELRDHFGQYGEIESINVKTDPNTGRSRGFAFIVFNNAEAIDKV 116
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL ++ +DD++ +FSQ+GTI V M +K ++GF FI F V
Sbjct: 133 KAKARHGKIFVGGLTNELSDDDIKNFFSQYGTIIEVEMPFDKTKNQRKGFCFITFESEQV 192
Query: 140 VDKI 143
V+++
Sbjct: 193 VNEL 196
>gi|321461997|gb|EFX73024.1| hypothetical protein DAPPUDRAFT_32116 [Daphnia pulex]
Length = 185
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 80 PEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ KK+FVGGL DD++ YF QFG +E ++ +K+T RGFAF+ F D
Sbjct: 84 PKMVTRTKKIFVGGLSAPSTVDDVKGYFEQFGRVEDAMLMFDKQTNRHRGFAFVTFESED 143
Query: 139 VVDKIRGFAFIEFND 153
VVDK+ F E N+
Sbjct: 144 VVDKVCEIHFHEINN 158
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 1/75 (1%)
Query: 87 KKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRG 145
+KMF+GGL Q + LREYFS+FG + V ++ + T RGF F+ F D VDK+
Sbjct: 2 RKMFIGGLSWQTSAEGLREYFSKFGDVTEVMVMKDPTTRRSRGFGFVTFADAASVDKVLA 61
Query: 146 FAFIEFNDYDVVDKI 160
A E + + K+
Sbjct: 62 SAPHELDGKKIDPKV 76
>gi|161084519|ref|NP_001097631.1| RNA-binding protein 6, isoform B [Drosophila melanogaster]
gi|158028569|gb|ABW08559.1| RNA-binding protein 6, isoform B [Drosophila melanogaster]
Length = 499
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 78 GKPEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 136
P+ KK+FVGGL +D++ YF QFG IE ++ +K+T RGF F+ F
Sbjct: 109 AHPKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQS 168
Query: 137 YDVVDKIRGFAFIEFND 153
DVVDK+ F E N+
Sbjct: 169 EDVVDKVCEIHFHEINN 185
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q + LR+YF ++G I ++ + T RGF F+ F+D + VDK+
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKV 86
>gi|242024531|ref|XP_002432681.1| RNA-binding protein squid, putative [Pediculus humanus corporis]
gi|212518151|gb|EEB19943.1| RNA-binding protein squid, putative [Pediculus humanus corporis]
Length = 295
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 61 EVDMEIPGPPHMDKLEIGKPEA-NATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMV 118
+ +M+ P P E G E+ N +K+FVG L + D +LRE+FSQFG IESV++
Sbjct: 6 DTEMKEPDPQQNGSTENGTTESTNNDDRKLFVGRLSWETTDKELREHFSQFGEIESVSVK 65
Query: 119 TNKETGAKRGFAFIEFNDYDVVDKI 143
T+ +G RGFAFI F D + ++K+
Sbjct: 66 TDPASGRSRGFAFIVFKDVESIEKV 90
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 76 EIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
+I +A A K+FVGGL + E+D+R +F QFGTI V + +K+ ++ F FI F
Sbjct: 102 KIDPKKAKARHGKIFVGGLDVETSEEDIRNFFGQFGTILEVELPFDKQKNQQKNFCFITF 161
Query: 135 NDYDVVDKI 143
V + +
Sbjct: 162 ESEQVTNDL 170
>gi|170042573|ref|XP_001848995.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167866108|gb|EDS29491.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 426
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 69 PPHMDKLEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKR 127
P H K ++N T KK+FVGG+ +D +++++YFSQFG +E M+ +++T R
Sbjct: 239 PKHATPKNRPKTQSNKT-KKIFVGGVSQDTSAEEVKQYFSQFGKVEETVMLMDQQTKRHR 297
Query: 128 GFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDKIVCK 163
GF F+ F DVVD++ F + K+ CK
Sbjct: 298 GFGFVTFEHEDVVDRVCEIHFHTIKN----KKVECK 329
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q + L EYF FG + V ++ + T RGF FI F + + VDK+
Sbjct: 168 KLFVGGLSWQTSSEKLSEYFGMFGKVTDVLIMKDPITQRSRGFGFITFQEPNSVDKV 224
>gi|432099908|gb|ELK28802.1| Heterogeneous nuclear ribonucleoprotein A1 [Myotis davidii]
Length = 93
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 48/66 (72%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P A+ T+KK+ VGG+K D EE LR+YF Q+G IE + ++T++ +G K+ FAFI +D+
Sbjct: 21 RPGAHLTLKKISVGGVKEDTEEYYLRDYFEQYGKIEVIEIMTDQGSGKKKNFAFIALDDH 80
Query: 138 DVVDKI 143
+ V K+
Sbjct: 81 NSVYKV 86
>gi|402887861|ref|XP_003907299.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Papio anubis]
Length = 637
Score = 61.2 bits (147), Expect = 1e-07, Method: Composition-based stats.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 354 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 412
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 413 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 451
>gi|390178414|ref|XP_001359012.3| GA14206, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859439|gb|EAL28155.3| GA14206, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 310
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + E +LR++F +FG IES+N+ T+ +TG RGFAFI F + + +DK+
Sbjct: 55 RKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 112
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL + +++++ YFSQFG I V M +K+ ++GF FI F+ V
Sbjct: 129 KAKARHGKIFVGGLTTEISDEEIKTYFSQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQV 188
Query: 140 V 140
V
Sbjct: 189 V 189
>gi|195144350|ref|XP_002013159.1| GL23974 [Drosophila persimilis]
gi|194102102|gb|EDW24145.1| GL23974 [Drosophila persimilis]
Length = 341
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + E +LR++F +FG IES+N+ T+ +TG RGFAFI F + + +DK+
Sbjct: 55 RKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 112
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL + +++++ YFSQFG I V M +K+ + F FI + V
Sbjct: 129 KAKARHGKIFVGGLTTEISDEEIQTYFSQFGNIVEVEMPFDKQKSQRTDFCFITLDSEQV 188
Query: 140 V 140
V
Sbjct: 189 V 189
>gi|344285367|ref|XP_003414433.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Loxodonta
africana]
Length = 520
Score = 61.2 bits (147), Expect = 2e-07, Method: Composition-based stats.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 78 GKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 136
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 146 AQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFEN 205
Query: 137 YDVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 206 EDVVEKVCEIHFHEINN 222
Score = 44.3 bits (103), Expect = 0.017, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 100 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRG 145
D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G
Sbjct: 80 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLG 125
>gi|317419098|emb|CBN81136.1| RNA-binding protein Musashi homolog 1 [Dicentrarchus labrax]
Length = 369
Score = 61.2 bits (147), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 59/110 (53%), Gaps = 7/110 (6%)
Query: 45 RPTINNKAMEEAQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLR 103
R I ++A+ + + E +D ++ P +P+ KK+FVGGL + +D++
Sbjct: 79 RFVIRSRALSQERDERIIDPKVAFP------RRAQPKLVTRTKKIFVGGLSVNTTIEDVK 132
Query: 104 EYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
YF QFG ++ ++ +K T RGF F+ F + DVV+K+ F E N+
Sbjct: 133 HYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINN 182
Score = 38.1 bits (87), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%), Gaps = 1/45 (2%)
Query: 88 KMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAF 131
KMF+GGL Q ++ L+EYF +FG ++ ++ + T RGF F
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGF 67
>gi|189234173|ref|XP_968418.2| PREDICTED: similar to heterogeneous nuclear ribonucleoprotein
[Tribolium castaneum]
Length = 373
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 5/86 (5%)
Query: 79 KPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGG+ +D D+++ YFSQFG +E M+ +++T RGF F+ F +
Sbjct: 136 RPKQPNKTKKIFVGGVSQDTSADEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENE 195
Query: 138 DVVDKIRGFAFIEFNDYDVVDKIVCK 163
DVVD++ F + K+ CK
Sbjct: 196 DVVDRVCEIHFHTIKN----KKVECK 217
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q + LREYF FG + V ++ + T RGF FI F++ VD +
Sbjct: 57 KLFVGGLSWQTSSEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFSEPSSVDNV 113
>gi|17136826|ref|NP_476935.1| RNA-binding protein 4 [Drosophila melanogaster]
gi|7299787|gb|AAF54966.1| RNA-binding protein 4 [Drosophila melanogaster]
Length = 428
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 87 KKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
K++F+GGLK+ +E+ +REYFSQFG + SV ++ ++ETG +R F F+EF D +K
Sbjct: 136 KRIFLGGLKEYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEK 192
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 79 KPEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
K E ++K+F+GGL Q + LR +FSQFG + ++ + + RGF F+ + D
Sbjct: 24 KEEGYEHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDP 83
Query: 138 DVVDKIR 144
V+ ++
Sbjct: 84 KSVEIVQ 90
>gi|604437|gb|AAC47508.1| testis-specific-RRM-protein [Drosophila melanogaster]
Length = 428
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 87 KKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
K++F+GGLK+ +E+ +REYFSQFG + SV ++ ++ETG +R F F+EF D +K
Sbjct: 136 KRIFLGGLKEYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEK 192
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 79 KPEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
K E ++K+F+GGL Q + LR +FSQFG + ++ + + RGF F+ + D
Sbjct: 24 KEEGYEHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDP 83
Query: 138 DVVDKIR 144
V+ ++
Sbjct: 84 KSVEIVQ 90
>gi|390608549|dbj|BAM21251.1| musashi homolog protein [Ephydatia fluviatilis]
Length = 362
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 63/125 (50%), Gaps = 12/125 (9%)
Query: 30 VRLAVEAGVLEVVTTRP-TINNKAMEEAQSEEEVDMEIPGPPHMDKLEIGKPEANATVKK 88
V +A V EV+ P T++NK ++ + M+ PP N VKK
Sbjct: 58 VTFTDQASVEEVMKNGPHTLDNKTIDP----KPATMKSATPPSQGG------SFNGRVKK 107
Query: 89 MFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFA 147
+FVGG+ EDD+R +F QFG + +++ +K T RGF F+ F+ DVVD++
Sbjct: 108 VFVGGIAAGTTEDDVRSFFGQFGPVTEIDLKFDKATQRMRGFGFVGFDSEDVVDRLCQIH 167
Query: 148 FIEFN 152
F + N
Sbjct: 168 FHQIN 172
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL + ED L++YFS++G + ++ + T RGF F+ F D V+++
Sbjct: 13 KIFVGGLSWETTEDGLKQYFSKYGEVSDCVIMQDPMTKRPRGFGFVTFTDQASVEEV 69
>gi|198453793|ref|XP_002137742.1| GA27393 [Drosophila pseudoobscura pseudoobscura]
gi|198132515|gb|EDY68300.1| GA27393 [Drosophila pseudoobscura pseudoobscura]
Length = 643
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 25/66 (37%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P KK+FVGG+ +D ++++ YF+QFG +E M+ +++T RGF F+ F +
Sbjct: 290 RPRQANKTKKIFVGGVSQDTSAEEVKAYFAQFGPVEETVMLMDQQTKRHRGFGFVTFENE 349
Query: 138 DVVDKI 143
DVVD++
Sbjct: 350 DVVDRV 355
Score = 51.2 bits (121), Expect = 1e-04, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q D L+EYF+ FGT+ V ++ + T RGF FI F D V+K+
Sbjct: 211 KLFVGGLSWQTSSDKLKEYFNMFGTVTDVLIMKDPVTQRSRGFGFITFQDPCTVEKV 267
>gi|19528161|gb|AAL90195.1| AT27014p [Drosophila melanogaster]
Length = 428
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 87 KKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
K++F+GGLK+ +E+ +REYFSQFG + SV ++ ++ETG +R F F+EF D +K
Sbjct: 136 KRIFLGGLKEYHDENIVREYFSQFGPVASVKLLMDRETGRQRAFGFLEFVDPSSAEK 192
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%), Gaps = 1/67 (1%)
Query: 79 KPEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
K E ++K+F+GGL Q + LR +FSQFG + ++ + + RGF F+ + D
Sbjct: 24 KEEGYEHLRKIFIGGLSTQTTVETLRGFFSQFGIVADAVVLRDPVSNHSRGFGFVTYVDP 83
Query: 138 DVVDKIR 144
V+ ++
Sbjct: 84 KSVEIVQ 90
>gi|301753349|ref|XP_002912535.1| PREDICTED: hypothetical protein LOC100472152 [Ailuropoda
melanoleuca]
Length = 642
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 50 NKAMEEAQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQ 108
+K M+ Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF
Sbjct: 439 DKVMD--QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGG 491
Query: 109 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
FG +ES+ + + +T +RGF FI F + + V KI
Sbjct: 492 FGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKI 526
Score = 52.4 bits (124), Expect = 7e-05, Method: Composition-based stats.
Identities = 29/92 (31%), Positives = 49/92 (53%), Gaps = 6/92 (6%)
Query: 53 MEEAQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGT 111
++ +++EE+ P H + + E KMF+GGL D + DL++YFS+FG
Sbjct: 355 IDASKNEEDEGHSNSSPRHSEAATAQREEW-----KMFIGGLSWDTTKKDLKDYFSKFGE 409
Query: 112 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + + TG RGF F+ F + + VDK+
Sbjct: 410 VVDCTLKLDPITGRSRGFGFVLFKESESVDKV 441
>gi|390178412|ref|XP_003736644.1| GA14206, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859438|gb|EIM52717.1| GA14206, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 319
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + E +LR++F +FG IES+N+ T+ +TG RGFAFI F + + +DK+
Sbjct: 55 RKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 112
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL + +++++ YFSQFG I V M +K+ ++GF FI F+ V
Sbjct: 129 KAKARHGKIFVGGLTTEISDEEIKTYFSQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQV 188
Query: 140 V 140
V
Sbjct: 189 V 189
>gi|270002456|gb|EEZ98903.1| hypothetical protein TcasGA2_TC004519 [Tribolium castaneum]
Length = 358
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGG+ +D D+++ YFSQFG +E M+ +++T RGF F+ F +
Sbjct: 121 RPKQPNKTKKIFVGGVSQDTSADEVKAYFSQFGKVEETVMLMDQQTKRHRGFGFVTFENE 180
Query: 138 DVVDKI 143
DVVD++
Sbjct: 181 DVVDRV 186
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q + LREYF FG + V ++ + T RGF FI F++ VD +
Sbjct: 42 KLFVGGLSWQTSSEKLREYFGMFGNVTDVLIMKDPVTQRSRGFGFITFSEPSSVDNV 98
>gi|195591012|ref|XP_002085238.1| GD12423 [Drosophila simulans]
gi|194197247|gb|EDX10823.1| GD12423 [Drosophila simulans]
Length = 351
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 80 PEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ KK+FVGGL +D++ YF QFG IE ++ +K+T RGF F+ F D
Sbjct: 111 PKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSED 170
Query: 139 VVDKIRGFAFIEFND 153
VVDK+ F E N+
Sbjct: 171 VVDKVCEIHFHEINN 185
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q + LR+YF ++G I ++ + T RGF F+ F+D + VDK+
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKV 86
>gi|347963746|ref|XP_003436985.1| AGAP000399-PB [Anopheles gambiae str. PEST]
gi|333467054|gb|EGK96461.1| AGAP000399-PB [Anopheles gambiae str. PEST]
Length = 371
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + D +L+E+FSQ+G IES+N+ T+ TG RGFAFI + D +DK+
Sbjct: 103 RKLFVGGLSWETSDKELKEHFSQYGDIESINVKTDPNTGRSRGFAFIVYKSADSIDKV 160
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL + +++++ +F QFG I V M +K+ ++GF FI F+ V
Sbjct: 177 KAKARYGKIFVGGLTSEISDEEIKTFFGQFGNIVEVEMPFDKQKNQRKGFCFITFDSEQV 236
Query: 140 VDKI 143
V+++
Sbjct: 237 VNEL 240
>gi|328783731|ref|XP_623522.3| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like isoform 2
[Apis mellifera]
Length = 486
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 80 PEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ KK+FVGGL +D++ YF QFG IE ++ +K+T RGF F+ F D
Sbjct: 180 PKMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSED 239
Query: 139 VVDKIRGFAFIEFND 153
VVDK+ F E N+
Sbjct: 240 VVDKVCEIHFHEINN 254
>gi|102140031|gb|ABF70162.1| RNA-binding protein, putative [Musa acuminata]
Length = 465
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 3/114 (2%)
Query: 40 EVVTTRPTINNKAMEEAQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLKDQ-E 98
VVT + TI+ + +E ++ D + + G P T KK+FVGGL
Sbjct: 62 RVVTEKHTIDGRMVEAKKAVPRDDHQFLNKNSSSSIH-GSPVPGHT-KKIFVGGLSSTIT 119
Query: 99 EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFN 152
E D ++YF QFGTI V ++ + T RGF FI ++ D VDK+ AF E N
Sbjct: 120 EGDFKKYFDQFGTITDVVVMYDHNTQRPRGFGFITYDSEDAVDKVLLNAFHELN 173
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 86 VKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ K+F+GG+ D ED LR+YFS FG + ++ ++ TG RGF F+ F D V +++
Sbjct: 5 LGKLFIGGISWDTNEDSLRKYFSAFGEVVEAVIMKDRTTGRARGFGFVVFADPAVTERV 63
>gi|508270|gb|AAA64654.1| A+U-rich RNA-binding protein [Mus musculus]
Length = 269
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 126 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 180
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ +K+T +RGF FI F + + V KI
Sbjct: 181 ELPMDKKTNKRRGFCFITFKEEEPVKKI 208
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 67 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 123
>gi|347963748|ref|XP_310701.5| AGAP000399-PA [Anopheles gambiae str. PEST]
gi|333467053|gb|EAA06653.5| AGAP000399-PA [Anopheles gambiae str. PEST]
Length = 363
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + D +L+E+FSQ+G IES+N+ T+ TG RGFAFI + D +DK+
Sbjct: 103 RKLFVGGLSWETSDKELKEHFSQYGDIESINVKTDPNTGRSRGFAFIVYKSADSIDKV 160
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 57 QSEEEVDMEIPGPPH-MDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIES 114
+S + +D + H ++ ++ +A A K+FVGGL + +++++ +F QFG I
Sbjct: 152 KSADSIDKVVAVSEHVINNKKVDPKKAKARYGKIFVGGLTSEISDEEIKTFFGQFGNIVE 211
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
V M +K+ ++GF FI F+ VV+++
Sbjct: 212 VEMPFDKQKNQRKGFCFITFDSEQVVNEL 240
>gi|324508919|gb|ADY43760.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 378
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 53/98 (54%), Gaps = 13/98 (13%)
Query: 59 EEEVDMEIPGPPHM------------DKLEIGKPEANATVKKMFVGGLK-DQEEDDLREY 105
+ EVD + PH+ + + + EAN + K+++V G++ D E +++
Sbjct: 72 QSEVDEAMANRPHVIDGKTVDPKRAVPREQSQRSEANISSKRLYVSGVREDHTEQMFKDH 131
Query: 106 FSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
F ++G I ++ +K TG RGFAF+ F+DYD VDK
Sbjct: 132 FGKYGNIIKCEIIADKATGKPRGFAFVTFDDYDAVDKC 169
Score = 40.0 bits (92), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 87 KKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+KMF+GGL D+ LRE++S++G + ++ + T RGF F+ ++ VD
Sbjct: 21 RKMFIGGLTSTTTDETLREFYSKWGELVDCVVMRDPTTKRSRGFGFVSYSKQSEVD 76
>gi|387016396|gb|AFJ50317.1| Heterogeneous nuclear ribonucleoprotein D0 isoform b [Crotalus
adamanteus]
Length = 330
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 132 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 186
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F D + V KI
Sbjct: 187 ELPMDNKTNKRRGFCFITFKDEEAVKKI 214
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMFVGGL D + DL++YF++FG + + + TG RGF F+ F + + V+K+
Sbjct: 73 KMFVGGLSWDTTKKDLKDYFTKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVEKV 129
>gi|432908112|ref|XP_004077759.1| PREDICTED: DAZ-associated protein 1-like [Oryzias latipes]
Length = 449
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 52/95 (54%), Gaps = 13/95 (13%)
Query: 60 EEVDMEIPGPPHMD-------KLEIGKPEANATV-----KKMFVGGLKDQ-EEDDLREYF 106
EE + + PH K+ + K +AN + +K+FVGGLK+ EE L +YF
Sbjct: 262 EETNTAMAAAPHTVQRNSVKVKVAVPKRKANGSAAPAKGEKIFVGGLKNNIEEYHLTDYF 321
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
S++G +E ++ +KETG KRGF F+ F + D
Sbjct: 322 SRYGQVEKSEILLDKETGKKRGFGFVHFTHHKTAD 356
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 57/109 (52%), Gaps = 8/109 (7%)
Query: 61 EVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVT 119
EV IP K + K EA A +K+FVGGL+ D +E L +YFS +G +E ++
Sbjct: 124 EVKRAIP------KAKDNKSEAFAKGEKIFVGGLRNDIKESHLTDYFSWYGQVEKSEILL 177
Query: 120 NKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV-VDKIVCKYNIE 167
KETG KRGF F+ F ++ D + N + V V K V K ++
Sbjct: 178 EKETGKKRGFGFVHFTHHNSADLALVVKYHTVNGHLVEVKKAVAKQEMQ 226
Score = 40.8 bits (94), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 86 VKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
V K+F+GGL DD LR++F QFGT+ ++ NK R F F+ ++
Sbjct: 52 VCKLFIGGLCVNTNDDGLRKHFEQFGTLTDFVVLQNKNAQRSRCFGFVTYS 102
>gi|432092848|gb|ELK25214.1| RNA-binding protein Musashi like protein 1 [Myotis davidii]
Length = 419
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 5/91 (5%)
Query: 68 GPPHMDKLEIGKPEAN----ATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKE 122
G PH D G P+ + KK+FVGGL + +D+++YF QFG ++ ++ +K
Sbjct: 51 GTPHSDARPRGPPKLDMGMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKT 110
Query: 123 TGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
T RGF F+ F D+V+K+ F E N+
Sbjct: 111 TNRHRGFGFVTFESEDIVEKVCEIHFHEINN 141
>gi|195571109|ref|XP_002103546.1| GD20485 [Drosophila simulans]
gi|194199473|gb|EDX13049.1| GD20485 [Drosophila simulans]
Length = 395
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/57 (49%), Positives = 41/57 (71%), Gaps = 1/57 (1%)
Query: 87 KKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
K++F+GGLK+ +E +REYFSQFG + SV ++ ++ETG +R F F+EF D DK
Sbjct: 132 KRIFLGGLKEYHDEKVVREYFSQFGPVASVKLLIDRETGRQRAFGFLEFVDPLSADK 188
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 41/73 (56%), Gaps = 1/73 (1%)
Query: 73 DKLEIGKPEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAF 131
D+ K E + ++K+F+GGL Q D LRE+FSQFG + ++ + + RGF F
Sbjct: 18 DRKTAIKDEGHEHLRKIFIGGLSTQTSVDKLREFFSQFGVVSDAVVMRDPMSNHSRGFGF 77
Query: 132 IEFNDYDVVDKIR 144
+ F D V+ ++
Sbjct: 78 VTFVDPKSVEIVQ 90
>gi|289739923|gb|ADD18709.1| RNA-binding protein musashi [Glossina morsitans morsitans]
Length = 295
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + E +LRE+FS+FG IES+N+ T+ +TG RGFAFI F ++K+
Sbjct: 49 RKLFVGGLSWETSEKELREHFSKFGEIESINVKTDSQTGRSRGFAFIVFTGPTAIEKV 106
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL ++ +D+++ YF QFG I V M +K+ ++ F FI F+ V
Sbjct: 123 KAKARHGKIFVGGLTNEISDDEIKTYFGQFGNIVEVEMPFDKQKSQRKAFCFITFDSEQV 182
Query: 140 VDKI 143
V ++
Sbjct: 183 VSEL 186
>gi|194748703|ref|XP_001956784.1| GF24401 [Drosophila ananassae]
gi|190624066|gb|EDV39590.1| GF24401 [Drosophila ananassae]
Length = 370
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 80 PEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ KK+FVGGL +D++ YF QFG IE ++ +K+T RGF F+ F D
Sbjct: 112 PKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSED 171
Query: 139 VVDKIRGFAFIEFND 153
VVDK+ F E N+
Sbjct: 172 VVDKVCEIHFHEINN 186
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q + LR+YF ++G I ++ + T RGF F+ F+D + VDK+
Sbjct: 31 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKV 87
>gi|405960558|gb|EKC26474.1| RNA-binding protein Musashi-like protein Rbp6 [Crassostrea gigas]
Length = 281
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 1/76 (1%)
Query: 78 GKPEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 136
+P+ KK+FVGGL +D++ YFSQ+G IE ++ +K T RGF F+ F +
Sbjct: 105 AQPKMVTRTKKIFVGGLSAATTVEDVKNYFSQYGKIEDAMLMFDKTTNRHRGFGFVTFEN 164
Query: 137 YDVVDKIRGFAFIEFN 152
DVVDK+ F E N
Sbjct: 165 EDVVDKVCEIHFHEIN 180
Score = 40.8 bits (94), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 88 KMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
KMF+GGL Q + L+++F +FG I+ ++ + T RGF F+ + D VD
Sbjct: 26 KMFIGGLSWQTTVESLKDHFGRFGEIKEAMVMKDPTTKRSRGFGFVTYKDPASVD 80
>gi|442633006|ref|NP_001261979.1| RNA-binding protein 6, isoform G [Drosophila melanogaster]
gi|440215929|gb|AGB94672.1| RNA-binding protein 6, isoform G [Drosophila melanogaster]
Length = 371
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 80 PEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ KK+FVGGL +D++ YF QFG IE ++ +K+T RGF F+ F D
Sbjct: 111 PKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSED 170
Query: 139 VVDKIRGFAFIEFND 153
VVDK+ F E N+
Sbjct: 171 VVDKVCEIHFHEINN 185
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q + LR+YF ++G I ++ + T RGF F+ F+D + VDK+
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKV 86
>gi|71896513|ref|NP_001025523.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Xenopus (Silurana)
tropicalis]
gi|52355236|gb|AAU44811.1| AUF1 [Xenopus (Silurana) tropicalis]
Length = 295
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 8/95 (8%)
Query: 50 NKAMEEAQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQ 108
+K ME Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF
Sbjct: 93 DKVME--QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGT 145
Query: 109 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
FG IE++ + + +T +RGF FI F + D V KI
Sbjct: 146 FGEIEAIELPMDNKTNKRRGFCFITFKEEDPVKKI 180
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 39 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESEGVDKV 95
>gi|297840659|ref|XP_002888211.1| RNA-binding protein 1 [Arabidopsis lyrata subsp. lyrata]
gi|297334052|gb|EFH64470.1| RNA-binding protein 1 [Arabidopsis lyrata subsp. lyrata]
Length = 359
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 45/71 (63%), Gaps = 2/71 (2%)
Query: 88 KMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF-NDYDVVDKIRG 145
K+FVGG+ K+ E+DL++YFS++G + + +K TG RGF F+ F NDYDVV + G
Sbjct: 7 KLFVGGIGKETSEEDLKQYFSRYGLVLGAVVAKDKVTGISRGFGFVRFANDYDVVKALSG 66
Query: 146 FAFIEFNDYDV 156
FI DV
Sbjct: 67 THFILGKPVDV 77
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 86 VKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIR 144
KK+FVGGL + +++ + YF +FG V ++ + T RGF F+ ++ D V+ +
Sbjct: 119 TKKIFVGGLSSNTTQEEFKSYFERFGRTIDVVVMHDGVTNKPRGFGFVTYDSEDSVEFVM 178
Query: 145 GFAFIEFNDYDV-VDKIVCKYNIE 167
F E +D V V + + K I+
Sbjct: 179 QSNFHELSDKRVEVKRAIPKEGIQ 202
>gi|62484464|ref|NP_730245.2| RNA-binding protein 6, isoform A [Drosophila melanogaster]
gi|194872120|ref|XP_001972967.1| GG15829 [Drosophila erecta]
gi|195328324|ref|XP_002030866.1| GM24349 [Drosophila sechellia]
gi|195494905|ref|XP_002095039.1| GE22169 [Drosophila yakuba]
gi|75027590|sp|Q9VVE5.3|MSIR6_DROME RecName: Full=RNA-binding protein Musashi homolog Rbp6
gi|21483526|gb|AAM52738.1| RE25373p [Drosophila melanogaster]
gi|61678495|gb|AAF49366.3| RNA-binding protein 6, isoform A [Drosophila melanogaster]
gi|190654750|gb|EDV51993.1| GG15829 [Drosophila erecta]
gi|194119809|gb|EDW41852.1| GM24349 [Drosophila sechellia]
gi|194181140|gb|EDW94751.1| GE22169 [Drosophila yakuba]
Length = 369
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 80 PEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ KK+FVGGL +D++ YF QFG IE ++ +K+T RGF F+ F D
Sbjct: 111 PKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSED 170
Query: 139 VVDKIRGFAFIEFND 153
VVDK+ F E N+
Sbjct: 171 VVDKVCEIHFHEINN 185
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q + LR+YF ++G I ++ + T RGF F+ F+D + VDK+
Sbjct: 30 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKV 86
>gi|195442400|ref|XP_002068946.1| GK18043 [Drosophila willistoni]
gi|194165031|gb|EDW79932.1| GK18043 [Drosophila willistoni]
Length = 386
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 80 PEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ KK+FVGGL +D++ YF QFG IE ++ +K+T RGF F+ F D
Sbjct: 125 PKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSED 184
Query: 139 VVDKIRGFAFIEFND 153
VVDK+ F E N+
Sbjct: 185 VVDKVCEIHFHEINN 199
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q + LR+YF ++G I ++ + T RGF F+ F+D + VDK+
Sbjct: 44 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKV 100
>gi|380014686|ref|XP_003691353.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Apis
florea]
Length = 410
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 80 PEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ KK+FVGGL +D++ YF QFG IE ++ +K+T RGF F+ F D
Sbjct: 104 PKMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSED 163
Query: 139 VVDKIRGFAFIEFND 153
VVDK+ F E N+
Sbjct: 164 VVDKVCEIHFHEINN 178
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q + LREYF+++G I V ++ + T RGF FI F D VDK+
Sbjct: 23 KMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDKV 79
>gi|345494041|ref|XP_001606007.2| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Nasonia
vitripennis]
Length = 367
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 80 PEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ KK+FVGGL +D++ YF QFG IE ++ +K+T RGF F+ F D
Sbjct: 104 PKMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSED 163
Query: 139 VVDKIRGFAFIEFND 153
VVDK+ F E N+
Sbjct: 164 VVDKVCEIHFHEINN 178
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q + LREYF+++G I V ++ + T RGF FI F D VDK+
Sbjct: 23 KMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDKV 79
>gi|195125567|ref|XP_002007249.1| GI12835 [Drosophila mojavensis]
gi|193918858|gb|EDW17725.1| GI12835 [Drosophila mojavensis]
Length = 383
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 80 PEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ KK+FVGGL +D++ YF QFG IE ++ +K+T RGF F+ F D
Sbjct: 125 PKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSED 184
Query: 139 VVDKIRGFAFIEFND 153
VVDK+ F E N+
Sbjct: 185 VVDKVCEIHFHEINN 199
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q + LR+YF ++G I ++ + T RGF F+ F+D + VDK+
Sbjct: 44 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKV 100
>gi|195016128|ref|XP_001984346.1| GH15068 [Drosophila grimshawi]
gi|193897828|gb|EDV96694.1| GH15068 [Drosophila grimshawi]
Length = 379
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 80 PEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ KK+FVGGL +D++ YF QFG IE ++ +K+T RGF F+ F D
Sbjct: 121 PKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSED 180
Query: 139 VVDKIRGFAFIEFND 153
VVDK+ F E N+
Sbjct: 181 VVDKVCEIHFHEINN 195
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q + LR+YF ++G I ++ + T RGF F+ F+D + VDK+
Sbjct: 40 KMFIGGLSWQTSPESLRDYFGRYGDISEAMVMKDPTTRRSRGFGFVTFSDPNSVDKV 96
>gi|350398654|ref|XP_003485263.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Bombus
impatiens]
Length = 410
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 80 PEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ KK+FVGGL +D++ YF QFG IE ++ +K+T RGF F+ F D
Sbjct: 104 PKMVTRTKKIFVGGLSAPTTLEDVKNYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSED 163
Query: 139 VVDKIRGFAFIEFND 153
VVDK+ F E N+
Sbjct: 164 VVDKVCEIHFHEINN 178
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q + LREYF+++G I V ++ + T RGF FI F D VDK+
Sbjct: 23 KMFIGGLSWQTSPESLREYFTKYGDITEVMVMKDPTTRRSRGFGFITFADPASVDKV 79
>gi|195113435|ref|XP_002001273.1| GI10695 [Drosophila mojavensis]
gi|193917867|gb|EDW16734.1| GI10695 [Drosophila mojavensis]
Length = 342
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + E +LR++F +FG IES+N+ T+ +TG RGFAFI F + + +D++
Sbjct: 57 RKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDQV 114
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL + +++++ YFSQFG I V M +K+ ++GF FI F+ V
Sbjct: 131 KAKARHGKIFVGGLTTEISDEEIKTYFSQFGNIVEVEMPFDKQKSHRKGFCFITFDSEQV 190
Query: 140 V 140
V
Sbjct: 191 V 191
>gi|195573919|ref|XP_002104939.1| msi [Drosophila simulans]
gi|194200866|gb|EDX14442.1| msi [Drosophila simulans]
Length = 459
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Query: 81 EANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+AN T KK+FVGG+ +D ++++ YFSQFG +E M+ +++T RGF F+ F + DV
Sbjct: 111 QANKT-KKIFVGGVSQDTSAEEVKAYFSQFGPVEETVMLMDQQTKRHRGFGFVTFENEDV 169
Query: 140 VDKIRGFAFIEFNDYDVVDKIVCK 163
VD++ F + K+ CK
Sbjct: 170 VDRVCEIHFHTIKN----KKVECK 189
>gi|390608551|dbj|BAM21252.1| RRM-containing protein [Ephydatia fluviatilis]
Length = 431
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 56/98 (57%), Gaps = 6/98 (6%)
Query: 59 EEEVDMEIPGPPHMDKLEIGKPE--ANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
++ +D +I PP ++ P A + K++FVGGL D E DL+EYF +FGTI+ V
Sbjct: 120 DKNIDPKIAVPPKRPGNKVMSPPWTAPSQTKRIFVGGLSSDSTEMDLQEYFQEFGTIQDV 179
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ ++ T RGF F+ F+ +K+ I+++D
Sbjct: 180 QLMYDRNTSRHRGFGFVTFDSEKPAEKV---CSIQYHD 214
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q + L EYF++FG + N++ + T RGF FI F D V K+
Sbjct: 51 KIFVGGLSWQTSSEKLAEYFARFGEVLECNIMRDPSTRRSRGFGFITFKDPASVSKV 107
>gi|346467163|gb|AEO33426.1| hypothetical protein [Amblyomma maculatum]
Length = 287
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 44/75 (58%), Gaps = 1/75 (1%)
Query: 80 PEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ KK+FVGGL +D++ YF QFG IE ++ +K+T RGF F+ F + D
Sbjct: 133 PKMVTRTKKVFVGGLSAPTTLEDVKNYFQQFGRIEDAMLMFDKQTNRHRGFGFVTFENED 192
Query: 139 VVDKIRGFAFIEFND 153
VVDK+ F E N+
Sbjct: 193 VVDKVCEIHFHEINN 207
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
EA KMF+GGL Q + LREYFS+FG I V ++ + T RGF F+ F+D
Sbjct: 45 EAAHDPGKMFIGGLSWQTAPEGLREYFSKFGDITEVMVMKDPSTRRSRGFGFVTFSDPAS 104
Query: 140 VDKI 143
VDK+
Sbjct: 105 VDKV 108
>gi|194741284|ref|XP_001953119.1| GF17370 [Drosophila ananassae]
gi|190626178|gb|EDV41702.1| GF17370 [Drosophila ananassae]
Length = 343
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + E +LR++F +FG IES+N+ T+ +TG RGFAFI F + +DK+
Sbjct: 57 RKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTTTEAIDKV 114
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL + +++++ YF QFG I V M +K+ ++GF FI F+ V
Sbjct: 131 KAKARHGKIFVGGLTTEITDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDAEQV 190
Query: 140 V 140
V
Sbjct: 191 V 191
>gi|270014210|gb|EFA10658.1| hypothetical protein TcasGA2_TC016295 [Tribolium castaneum]
Length = 300
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 86 VKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIR 144
KK+FVGGL +D++ YF QFG IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 5 TKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVC 64
Query: 145 GFAFIEFND 153
F E N+
Sbjct: 65 EIHFHEINN 73
>gi|195451832|ref|XP_002073095.1| GK13337 [Drosophila willistoni]
gi|194169180|gb|EDW84081.1| GK13337 [Drosophila willistoni]
Length = 353
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + E +LR++F +FG I+S+N+ T+ +TG RGFAFI F + + +DK+
Sbjct: 66 RKLFVGGLSWETTEKELRDHFGKFGDIDSINVKTDPQTGRSRGFAFIVFTNTEAIDKV 123
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL + ++++R YFSQFGTI V M +K+ ++GF FI F+ V
Sbjct: 140 KAKARHGKIFVGGLTTEISDEEIRTYFSQFGTIVEVEMPFDKQKSQRKGFCFITFDSEQV 199
Query: 140 V 140
V
Sbjct: 200 V 200
>gi|386771324|ref|NP_001246813.1| RNA-binding protein 6, isoform F [Drosophila melanogaster]
gi|383291984|gb|AFH04484.1| RNA-binding protein 6, isoform F [Drosophila melanogaster]
Length = 225
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 86 VKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIR 144
KK+FVGGL +D++ YF QFG IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 5 TKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVC 64
Query: 145 GFAFIEFND 153
F E N+
Sbjct: 65 EIHFHEINN 73
>gi|363748813|ref|XP_003644624.1| hypothetical protein Ecym_2050 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888257|gb|AET37807.1| Hypothetical protein Ecym_2050 [Eremothecium cymbalariae
DBVPG#7215]
Length = 541
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 86 VKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ KMF+GGL + ED+LREYFS++GT+ V ++ + TG RGF F+ F D VD++
Sbjct: 170 INKMFIGGLNWETTEDNLREYFSKYGTVTEVKIMRDGTTGRSRGFGFLSFADASSVDEV 228
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 88 KMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
K+FVGG+ D + E+FS++G+I ++ +K+TG RGF FI ++ D VD++
Sbjct: 256 KIFVGGIGPDVRPKEFEEFFSEWGSIIDAQLMLDKDTGRSRGFGFITYDSPDAVDRVCQN 315
Query: 147 AFIEF 151
FIEF
Sbjct: 316 KFIEF 320
>gi|158296251|ref|XP_001688945.1| AGAP006656-PB [Anopheles gambiae str. PEST]
gi|157016421|gb|EDO63951.1| AGAP006656-PB [Anopheles gambiae str. PEST]
Length = 327
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 80 PEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ KK+FVGGL +D++ YF QFG IE ++ +K+T RGF F+ F D
Sbjct: 68 PKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSED 127
Query: 139 VVDKIRGFAFIEFND 153
VVDK+ F E N+
Sbjct: 128 VVDKVCEIHFHEINN 142
Score = 42.7 bits (99), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%)
Query: 102 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDKIV 161
LR+YFS+FG I V ++ + T RGF FI F D VDK+ E + + K+
Sbjct: 2 LRDYFSKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDKVLAHGTHELDGKKIDPKVA 61
>gi|386771322|ref|NP_001246812.1| RNA-binding protein 6, isoform E [Drosophila melanogaster]
gi|383291983|gb|AFH04483.1| RNA-binding protein 6, isoform E [Drosophila melanogaster]
Length = 259
Score = 60.1 bits (144), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 86 VKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIR 144
KK+FVGGL +D++ YF QFG IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 5 TKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVC 64
Query: 145 GFAFIEFND 153
F E N+
Sbjct: 65 EIHFHEINN 73
>gi|161084522|ref|NP_001097632.1| RNA-binding protein 6, isoform C [Drosophila melanogaster]
gi|158028570|gb|ABW08560.1| RNA-binding protein 6, isoform C [Drosophila melanogaster]
Length = 257
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 86 VKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIR 144
KK+FVGGL +D++ YF QFG IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 5 TKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVC 64
Query: 145 GFAFIEFND 153
F E N+
Sbjct: 65 EIHFHEINN 73
>gi|242014750|ref|XP_002428048.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212512567|gb|EEB15310.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 371
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 54/88 (61%), Gaps = 7/88 (7%)
Query: 78 GKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 136
G+ + N KK+FVGG+ +D D+++ YFSQFG +E M+ +++T RGF F+ F +
Sbjct: 138 GRGKTNGKTKKIFVGGVSQDTSSDEVKVYFSQFGKVEEAVMLMDQQTKRHRGFGFVTFEN 197
Query: 137 YDVVDKIRGFAFIEFNDYDVVDKIV-CK 163
+ VD++ E + +++ +K V CK
Sbjct: 198 EETVDRV-----CEIHFHNIKNKKVECK 220
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 51/113 (45%), Gaps = 3/113 (2%)
Query: 33 AVEAGVLEVVTTRPTINNKAMEEAQSEEEVDMEIPGPPHMDKLEIGKPEANATVK-KMFV 91
A L VT P N ++ + E + G ++ P A++T K+FV
Sbjct: 5 ATSMRTLNHVTHHPVSQNGGLQIKSTPETAAVNGNGTGSGNEGS-SSPGADSTAAGKLFV 63
Query: 92 GGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
GGL Q + LR+YF FG I V ++ + T RGF FI F + V+ +
Sbjct: 64 GGLSWQTSSEKLRQYFGMFGNITDVLIMKDPVTQRSRGFGFITFEEPSSVENV 116
>gi|385455|gb|AAB26989.1| SqdB [Drosophila melanogaster]
Length = 308
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + E +LR++F ++G IES+N+ T+ +TG RGFAFI F + + +DK+
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 113
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL + +++++ YF QFG I V M +K+ ++GF FI F+ V
Sbjct: 130 KAKARHGKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPLDKQKSQRKGFCFITFDSEQV 189
Query: 140 V 140
V
Sbjct: 190 V 190
>gi|442761931|gb|JAA73124.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Ixodes ricinus]
Length = 227
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 1/77 (1%)
Query: 78 GKPEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 136
P+ KK+FVGGL +D++ YF QFG IE ++ +K+T RGF F+ F +
Sbjct: 6 AHPKMVTRTKKVFVGGLSAPRTLEDVKNYFQQFGRIEDAMLMFDKQTNRHRGFGFVTFEN 65
Query: 137 YDVVDKIRGFAFIEFND 153
DV DK+ F E N+
Sbjct: 66 EDVADKVCEIHFHEINN 82
>gi|224284234|gb|ACN39853.1| unknown [Picea sitchensis]
Length = 473
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 59/116 (50%), Gaps = 8/116 (6%)
Query: 40 EVVTTRPTINNKAMEEAQSEEEVDMEIPGPPHMDKLE--IGKPEANATVKKMFVGGLKDQ 97
VV + TI+ + +E ++ D + HM++ P + KK+FVGGL
Sbjct: 62 RVVLDKHTIDGRTVEAKKAIPRDDQQ-----HMNRNSNIAHAPPSQVRTKKIFVGGLAPT 116
Query: 98 -EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFN 152
E+D R+YF QFGTI V ++ + T RGF FI ++ D VD++ F + N
Sbjct: 117 VTENDFRKYFEQFGTITDVVVMYDHSTQRPRGFGFITYDSEDAVDQVLQKTFHDLN 172
Score = 43.1 bits (100), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+F+GG+ + ED L++YF +FG + ++ ++ T RGF F+ F D + D++
Sbjct: 7 KLFIGGISWETTEDRLKDYFKRFGEVVEAVIMKDRTTRRARGFGFVVFADPAIADRV 63
>gi|196476793|gb|ACG76260.1| heterogeneous nuclear ribonucleoprotein [Amblyomma americanum]
Length = 195
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+ N +K+FVGG+ D + DLREYFS+FG + VN+ T+ TG RGF F+ FN D
Sbjct: 26 KTNEDERKLFVGGISWDTDNKDLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTFNAKDA 85
Query: 140 VDKI 143
++ +
Sbjct: 86 IEAV 89
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A +KK+FVGGL+ D E D++ YF +G +E+V + +K +R FAF+ F D
Sbjct: 108 KARPGIKKIFVGGLESDMPEADIKAYFEMYGPVENVELPFDKAKIQRRQFAFVTFEREDS 167
Query: 140 VDKI 143
VD +
Sbjct: 168 VDLV 171
>gi|66911597|gb|AAH97855.1| LOC496375 protein [Xenopus laevis]
Length = 286
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Query: 50 NKAMEEAQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQ 108
+K ME Q E +++ ++ P ++ +P VKK+FVGGL D ED +REYF
Sbjct: 84 DKVME--QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEDKIREYFGT 136
Query: 109 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
FG +E++ + + +T +RGF FI F + D V I
Sbjct: 137 FGEVEAIELPMDNKTNKRRGFCFITFKEEDPVKNI 171
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 30 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESEGVDKV 86
>gi|11040|emb|CAA44504.1| hrp40.2 [Drosophila melanogaster]
Length = 345
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + E +LR++F ++G IES+N+ T+ +TG RGFAFI F + + +DK+
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 113
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL + +++++ YF QFG I V M +K+ ++GF FI F+ V
Sbjct: 130 KAKARHGKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQV 189
Query: 140 V 140
V
Sbjct: 190 V 190
>gi|24646607|ref|NP_731825.1| squid, isoform B [Drosophila melanogaster]
gi|55584092|sp|Q08473.3|SQD_DROME RecName: Full=RNA-binding protein squid; AltName:
Full=Heterogeneous nuclear ribonucleoprotein 40;
Short=HNRNP 40
gi|23171184|gb|AAF54963.2| squid, isoform B [Drosophila melanogaster]
Length = 344
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + E +LR++F ++G IES+N+ T+ +TG RGFAFI F + + +DK+
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 113
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL + +++++ YF QFG I V M +K+ ++GF FI F+ V
Sbjct: 130 KAKARHGKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQV 189
Query: 140 V 140
V
Sbjct: 190 V 190
>gi|158296255|ref|XP_001688946.1| AGAP006656-PA [Anopheles gambiae str. PEST]
gi|157016423|gb|EDO63952.1| AGAP006656-PA [Anopheles gambiae str. PEST]
Length = 237
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 80 PEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ KK+FVGGL +D++ YF QFG IE ++ +K+T RGF F+ F D
Sbjct: 68 PKMVTRTKKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSED 127
Query: 139 VVDKIRGFAFIEFND 153
VVDK+ F E N+
Sbjct: 128 VVDKVCEIHFHEINN 142
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 31/60 (51%)
Query: 102 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDKIV 161
LR+YFS+FG I V ++ + T RGF FI F D VDK+ E + + K+
Sbjct: 2 LRDYFSKFGEITEVMVMKDPTTRRSRGFGFITFGDPASVDKVLAHGTHELDGKKIDPKVA 61
>gi|24646605|ref|NP_652209.1| squid, isoform C [Drosophila melanogaster]
gi|386765705|ref|NP_001247088.1| squid, isoform E [Drosophila melanogaster]
gi|23171183|gb|AAN13570.1| squid, isoform C [Drosophila melanogaster]
gi|73853364|gb|AAZ86753.1| LD29474p [Drosophila melanogaster]
gi|220951946|gb|ACL88516.1| sqd-PC [synthetic construct]
gi|383292688|gb|AFH06406.1| squid, isoform E [Drosophila melanogaster]
Length = 308
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + E +LR++F ++G IES+N+ T+ +TG RGFAFI F + + +DK+
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 113
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL + +++++ YF QFG I V M +K+ ++GF FI F+ V
Sbjct: 130 KAKARHGKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQV 189
Query: 140 V 140
V
Sbjct: 190 V 190
>gi|89257506|gb|ABD64996.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing
protein [Brassica oleracea]
Length = 587
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 3/113 (2%)
Query: 41 VVTTRPTINNKAMEEAQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLKDQ-EE 99
VV R I+ K +E ++ D + + L+ G P A KK+FVGGL E
Sbjct: 63 VVFLRHVIDGKLVEAKKAVPRDDHVVLNKSYNTSLQ-GSP-GPANSKKIFVGGLASSVTE 120
Query: 100 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFN 152
+ ++YF+QFG I V ++ + T RGF FI F D VDK+ F E N
Sbjct: 121 AEFKKYFAQFGVITDVVVMYDHRTQRPRGFGFISFESEDAVDKVLQRTFHELN 173
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+F+GG+ + ED LREYF FG + ++ ++ TG RGF F+ F+D V +++
Sbjct: 7 KLFIGGISWETTEDRLREYFQSFGEVLEAVIMKDRATGRARGFGFLVFSDPIVAERV 63
>gi|194901408|ref|XP_001980244.1| GG17035 [Drosophila erecta]
gi|190651947|gb|EDV49202.1| GG17035 [Drosophila erecta]
Length = 345
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + E +LR++F ++G IES+N+ T+ +TG RGFAFI F + + +DK+
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 113
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL + +++++ YF QFG I V M +K+ ++GF FI F+ V
Sbjct: 130 KAKARHGKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQV 189
Query: 140 V 140
V
Sbjct: 190 V 190
>gi|432955934|ref|XP_004085635.1| PREDICTED: deleted in azoospermia protein 1-like, partial [Oryzias
latipes]
Length = 502
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 55/107 (51%), Gaps = 12/107 (11%)
Query: 41 VVTTRPTINNKAMEEAQ-----SEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK 95
V + P N AM A + EV IP K + K EA A +K+FVGGLK
Sbjct: 60 VTYSTPEETNAAMAAAPHTVEGNSVEVKRAIP------KAKDNKSEAFAKGEKIFVGGLK 113
Query: 96 DQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
+ +E L +YFS++G +E ++ KETG KRGF F+ F + D
Sbjct: 114 NNIKEYHLTDYFSRYGPVEKSEILLEKETGKKRGFGFVHFTHHKTAD 160
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 13/95 (13%)
Query: 60 EEVDMEIPGPPHMD-------KLEIGKPEANATV-----KKMFVGGLKDQ-EEDDLREYF 106
EE + + PH K+ + K +AN + +K+FVGGLK+ EE L YF
Sbjct: 380 EETNAAMAASPHTVQRNSVKVKVAVPKGKANGSAAPAKGEKIFVGGLKNNIEEFHLTNYF 439
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
S++G +E ++ KETG KRGF F+ F + D
Sbjct: 440 SRYGQVEKSEILLEKETGKKRGFGFVHFTHHKTAD 474
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 13/95 (13%)
Query: 60 EEVDMEIPGPPHMD-------KLEIGKPEANATV-----KKMFVGGLKDQ-EEDDLREYF 106
EE + + PH K + K +AN + +K+FVGGLK+ EE L +YF
Sbjct: 223 EETNAAMAAAPHTVQRNSVKVKGAVPKAKANGSAAPAKGEKIFVGGLKNNIEEYHLTDYF 282
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
S++G +E ++ KETG KRGF F+ F + D
Sbjct: 283 SRYGPVEKSEILLEKETGKKRGFGFVHFTHHKTAD 317
Score = 39.7 bits (91), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 86 VKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
V K+F+GGL DD LR++F QFGT+ ++ NK R F F+ ++
Sbjct: 13 VCKLFIGGLCVNTNDDGLRKHFEQFGTLTDFVVLQNKNAQRSRCFGFVTYS 63
>gi|312378143|gb|EFR24795.1| hypothetical protein AND_10386 [Anopheles darlingi]
Length = 486
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 6/96 (6%)
Query: 69 PPHMDKLEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKR 127
P H K ++N T KK+FVGG+ +D ++++ YFSQFG +E M+ +++T R
Sbjct: 183 PKHATPKNRPKTQSNKT-KKIFVGGVSQDTSAEEVKAYFSQFGKVEETVMLMDQQTKRHR 241
Query: 128 GFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDKIVCK 163
GF F+ F + DVVD++ F + K+ CK
Sbjct: 242 GFGFVTFENEDVVDRVCEIHFHTIKN----KKVECK 273
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q + L EYF FGT+ V ++ + T RGF FI F + + VDK+
Sbjct: 112 KLFVGGLSWQTSSEKLSEYFGMFGTVTDVLIMKDPVTQRSRGFGFITFQEPNSVDKV 168
>gi|385454|gb|AAB26988.1| SqdA [Drosophila melanogaster]
Length = 321
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + E +LR++F ++G IES+N+ T+ +TG RGFAFI F + + +DK+
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 113
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL + +++++ YF QFG I V M +K+ ++GF FI F+ V
Sbjct: 130 KAKARHGKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPLDKQKSQRKGFCFITFDSEQV 189
Query: 140 V 140
V
Sbjct: 190 V 190
>gi|322798126|gb|EFZ19965.1| hypothetical protein SINV_80273 [Solenopsis invicta]
Length = 370
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 81 EANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+AN T KK+FVGG+ +D D+++ YF+QFG +E M+ +++T RGF F+ F + DV
Sbjct: 138 QANRT-KKIFVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDV 196
Query: 140 VDKI 143
VD++
Sbjct: 197 VDRV 200
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 11/79 (13%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGA----KRGFAFIEFNDYDVVDK 142
K+FVGGL Q + LREYFS FGT+ V ++ + T + G + + +
Sbjct: 41 KLFVGGLSWQTSSEKLREYFSMFGTVTDVLIMKDPMTQTVLVHRAGSRLVR------LQR 94
Query: 143 IRGFAFIEFNDYDVVDKIV 161
RGF FI F + VDK++
Sbjct: 95 SRGFGFITFAEPGSVDKVL 113
>gi|195500849|ref|XP_002097550.1| GE24428 [Drosophila yakuba]
gi|194183651|gb|EDW97262.1| GE24428 [Drosophila yakuba]
Length = 345
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + E +LR++F ++G IES+N+ T+ +TG RGFAFI F + + +DK+
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 113
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL + +++++ YF QFG I V M +K+ ++GF FI F+ V
Sbjct: 130 KAKARHGKIFVGGLTTEITDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQV 189
Query: 140 V 140
V
Sbjct: 190 V 190
>gi|24646609|ref|NP_731826.1| squid, isoform A [Drosophila melanogaster]
gi|11038|emb|CAA44503.1| hrp40.1 [Drosophila melanogaster]
gi|21428420|gb|AAM49870.1| LD09691p [Drosophila melanogaster]
gi|23171185|gb|AAF54964.2| squid, isoform A [Drosophila melanogaster]
gi|220943526|gb|ACL84306.1| sqd-PA [synthetic construct]
gi|220953540|gb|ACL89313.1| sqd-PA [synthetic construct]
Length = 321
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + E +LR++F ++G IES+N+ T+ +TG RGFAFI F + + +DK+
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDKV 113
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL + +++++ YF QFG I V M +K+ ++GF FI F+ V
Sbjct: 130 KAKARHGKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQV 189
Query: 140 V 140
V
Sbjct: 190 V 190
>gi|346466281|gb|AEO32985.1| hypothetical protein [Amblyomma maculatum]
Length = 321
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+ N +K+FVGG+ D + DLREYFS+FG + VN+ T+ TG RGF F+ FN D
Sbjct: 26 KTNEDERKLFVGGISWDTDNKDLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTFNAKDA 85
Query: 140 VDKI 143
++ +
Sbjct: 86 IEAV 89
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 81 EANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A +KK+FVGGL+ D E D++ YF +FG +E+V + +K +R FAF+ F D
Sbjct: 108 KARPGIKKIFVGGLESDMPEADIKAYFEKFGPVENVELPFDKAKNQRRQFAFVTFEREDS 167
Query: 140 VD 141
VD
Sbjct: 168 VD 169
>gi|242018680|ref|XP_002429802.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
gi|212514814|gb|EEB17064.1| Heterogeneous nuclear ribonucleoprotein 27C, putative [Pediculus
humanus corporis]
Length = 486
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 40/61 (65%), Gaps = 1/61 (1%)
Query: 84 ATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
A V+K+F+GG+ K +DDL EYF ++G + +V K+TG RGF F+E+ D D DK
Sbjct: 114 ANVRKLFIGGIGKAVTKDDLEEYFQKYGRLTDCAIVVTKDTGEPRGFGFVEYEDVDSADK 173
Query: 143 I 143
+
Sbjct: 174 V 174
Score = 38.5 bits (88), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 86 VKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
++KMF+GGL DD L+E++ ++G + V ++ + ++ RGF FI ++ +VD
Sbjct: 27 LRKMFIGGLDYSTTDDGLKEFYEKWGMVVDVVVMKDPKSRRSRGFGFITYSKASMVD 83
>gi|358342147|dbj|GAA49679.1| heterogeneous nuclear ribonucleoprotein A1 A2/B1 homolog
[Clonorchis sinensis]
Length = 919
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 28/65 (43%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 80 PEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P + V+K+F+GGL+ +D DL YFS+FG I ++ +KET RGF F+ F D D
Sbjct: 365 PIPDIPVRKIFIGGLRRSVKDSDLFSYFSEFGQIVEAVVMMDKETNQSRGFGFVTFVDTD 424
Query: 139 VVDKI 143
VD++
Sbjct: 425 SVDRV 429
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 22/63 (34%), Positives = 34/63 (53%), Gaps = 2/63 (3%)
Query: 75 LEIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIE 133
+ + P N +K+FVGGL +D LRE++S+FG + +V G RGF F+
Sbjct: 271 ITMSNPNCNMLERKLFVGGLNPVTDDYRLREFYSKFGVVTDA-VVMKDIAGRSRGFGFVT 329
Query: 134 FND 136
+ D
Sbjct: 330 YED 332
>gi|357602467|gb|EHJ63411.1| squid protein-like proteinue [Danaus plexippus]
Length = 288
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + D +LRE+FS +G IES+N+ T+ TG RGFAFI F D +DK+
Sbjct: 42 RKLFVGGLSWETTDKELREHFSAYGEIESINVKTDPNTGRSRGFAFIVFKAPDSIDKV 99
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL + +D+++ +FS FG I V M +K ++GF FI F V
Sbjct: 116 KAKARHGKIFVGGLSSEISDDEIKNFFSNFGNIIEVEMPFDKTKNQRKGFCFITFESEQV 175
Query: 140 VDKI 143
V+++
Sbjct: 176 VNEL 179
>gi|148227150|ref|NP_001088992.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Xenopus laevis]
gi|52082714|gb|AAU25946.1| p37 AUF1 [Xenopus laevis]
Length = 295
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Query: 50 NKAMEEAQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQ 108
+K ME Q E +++ ++ P ++ +P VKK+FVGGL D ED +REYF
Sbjct: 93 DKVME--QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEDKIREYFGT 145
Query: 109 FGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
FG +E++ + + +T +RGF FI F + D V I
Sbjct: 146 FGEVEAIELPMDNKTNKRRGFCFITFKEEDPVKNI 180
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 39 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESEGVDKV 95
>gi|115532850|ref|NP_001040945.1| Protein HRP-1, isoform d [Caenorhabditis elegans]
gi|351063093|emb|CCD71137.1| Protein HRP-1, isoform d [Caenorhabditis elegans]
Length = 347
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 70 PHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRG 128
P DK + E+N + K+++V G++ D ED L EYF+++GT+ ++ +K T RG
Sbjct: 100 PRDDK---NRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRG 156
Query: 129 FAFIEFNDYDVVDK 142
F F+ F+D+D VD+
Sbjct: 157 FGFVTFDDHDSVDQ 170
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 86 VKKMFVGGLKDQEEDDL-REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
++K+FVGGL DDL RE++SQFG I + ++ + T RGF F+ F+ VD
Sbjct: 22 LRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVD 78
>gi|25145229|ref|NP_500326.2| Protein HRP-1, isoform a [Caenorhabditis elegans]
gi|74965787|sp|Q22037.1|ROA1_CAEEL RecName: Full=Heterogeneous nuclear ribonucleoprotein A1;
Short=hnRNP A1
gi|217300|dbj|BAA01645.1| hnRNP like protein [Caenorhabditis elegans]
gi|351063090|emb|CCD71134.1| Protein HRP-1, isoform a [Caenorhabditis elegans]
Length = 346
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 47/74 (63%), Gaps = 4/74 (5%)
Query: 70 PHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRG 128
P DK + E+N + K+++V G++ D ED L EYF+++GT+ ++ +K T RG
Sbjct: 100 PRDDK---NRSESNVSTKRLYVSGVREDHTEDMLTEYFTKYGTVTKSEIILDKATQKPRG 156
Query: 129 FAFIEFNDYDVVDK 142
F F+ F+D+D VD+
Sbjct: 157 FGFVTFDDHDSVDQ 170
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 86 VKKMFVGGLKDQEEDDL-REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
++K+FVGGL DDL RE++SQFG I + ++ + T RGF F+ F+ VD
Sbjct: 22 LRKIFVGGLTSNTTDDLMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFSGKTEVD 78
>gi|380030870|ref|XP_003699062.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like, partial
[Apis florea]
Length = 185
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 81 EANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+AN T KK+FVGG+ +D D+++ YF+QFG +E M+ +++T RGF F+ F + DV
Sbjct: 58 QANRT-KKIFVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDV 116
Query: 140 VDKI 143
VD++
Sbjct: 117 VDRV 120
>gi|115532848|ref|NP_001040944.1| Protein HRP-1, isoform c [Caenorhabditis elegans]
gi|351063092|emb|CCD71136.1| Protein HRP-1, isoform c [Caenorhabditis elegans]
Length = 308
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 13/95 (13%)
Query: 61 EVDMEIPGPPHM------------DKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH+ + + + E+N + K+++V G++ D ED L EYF+
Sbjct: 38 EVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFT 97
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
++GT+ ++ +K T RGF F+ F+D+D VD+
Sbjct: 98 KYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQ 132
>gi|71988518|ref|NP_001023199.1| Protein HRP-1, isoform b [Caenorhabditis elegans]
gi|351063091|emb|CCD71135.1| Protein HRP-1, isoform b [Caenorhabditis elegans]
Length = 309
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 53/95 (55%), Gaps = 13/95 (13%)
Query: 61 EVDMEIPGPPHM------------DKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFS 107
EVD + PH+ + + + E+N + K+++V G++ D ED L EYF+
Sbjct: 38 EVDAAMKQRPHIIDGKTVDPKRAVPRDDKNRSESNVSTKRLYVSGVREDHTEDMLTEYFT 97
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
++GT+ ++ +K T RGF F+ F+D+D VD+
Sbjct: 98 KYGTVTKSEIILDKATQKPRGFGFVTFDDHDSVDQ 132
>gi|332018477|gb|EGI59067.1| RNA-binding protein Musashi-like protein Rbp6 [Acromyrmex
echinatior]
Length = 369
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 81 EANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+AN T KK+FVGG+ +D D+++ YF+QFG +E M+ +++T RGF F+ F + DV
Sbjct: 123 QANRT-KKIFVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDV 181
Query: 140 VDKI 143
VD++
Sbjct: 182 VDRV 185
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q + LREYF+ FGT+ V ++ + T RGF FI F + VDK+
Sbjct: 41 KLFVGGLSWQTSSEKLREYFNMFGTVTDVLIMKDPMTQRSRGFGFITFAEPGSVDKV 97
>gi|195329212|ref|XP_002031305.1| GM25919 [Drosophila sechellia]
gi|194120248|gb|EDW42291.1| GM25919 [Drosophila sechellia]
Length = 421
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 39/51 (76%), Gaps = 1/51 (1%)
Query: 87 KKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 136
K++F+GGLK+ +E +REYFSQFG + SV ++ ++ETG +R F F+EF D
Sbjct: 136 KRIFLGGLKEYHDEKVVREYFSQFGPVASVKLLIDRETGRQRAFGFLEFVD 186
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 74 KLEIGKPEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
K EI K E + ++K+F+GGL Q + LRE+FSQFG + ++ + + RGF F+
Sbjct: 20 KTEI-KDEGSEHLRKIFIGGLSTQTSMETLREFFSQFGVVSDAVVMRDPVSNHSRGFGFV 78
Query: 133 EFNDYDVVDKIR 144
F D V+ ++
Sbjct: 79 TFVDPKSVEIVQ 90
>gi|444723183|gb|ELW63844.1| RNA-binding protein Musashi like protein 1 [Tupaia chinensis]
Length = 324
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + DD+++YF QFG ++
Sbjct: 73 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVDDVKQYFEQFGKVDD 131
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 132 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 170
Score = 39.7 bits (91), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 102 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
LREYF QFG ++ ++ + T RGF F+ F D VDK+
Sbjct: 30 LREYFGQFGHVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKV 71
>gi|157110306|ref|XP_001651044.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878768|gb|EAT42993.1| AAEL005515-PB [Aedes aegypti]
Length = 292
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + D +L+E+F Q+G IES+N+ T+ TG RGFAFI + D +DK+
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKV 93
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 57 QSEEEVDMEIPGPPH-MDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIES 114
+S + +D + H ++ ++ +A A K+FVGGL + +++++ +F QFG I
Sbjct: 85 KSADSIDKVVAAGDHVINNKKVDPKKAKARHGKIFVGGLTTEISDEEIKTFFGQFGNIVE 144
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
V M +K+ ++GF FI F+ VV+++
Sbjct: 145 VEMPFDKQKNQRKGFCFITFDSEQVVNEL 173
>gi|427777737|gb|JAA54320.1| Putative glycine rich protein [Rhipicephalus pulchellus]
Length = 355
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+ N +K+FVGG+ D + DLREYFS+FG + VN+ T+ TG RGF F+ FN D
Sbjct: 55 KTNEDERKLFVGGISWDTDNKDLREYFSKFGVVVDVNIKTDPTTGKSRGFGFVTFNAKDA 114
Query: 140 VDKI 143
++ +
Sbjct: 115 IEAV 118
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 81 EANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A +KK+FVGGL+ D E D++ YF +FG +E+V + +K +R FAF+ F D
Sbjct: 137 KARPGIKKIFVGGLESDMPEADIKAYFEKFGPVENVELPFDKAKNQRRQFAFVTFEREDS 196
Query: 140 VD 141
V+
Sbjct: 197 VE 198
>gi|291401535|ref|XP_002717031.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D [Oryctolagus
cuniculus]
Length = 448
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 250 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 304
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 305 ELPMDNKTNKRRGFCFITFKEEEPVKKI 332
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 191 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 247
>gi|351709446|gb|EHB12365.1| Heterogeneous nuclear ribonucleoprotein D0 [Heterocephalus glaber]
Length = 271
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 52/88 (59%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+++REYF FG +ES+
Sbjct: 167 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEENIREYFGGFGEVESI 221
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 222 ELPMDNKTNKRRGFCFITFKEEEPVKKI 249
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++ FS+FG + + + TG RGF F+ + + VDK+
Sbjct: 108 KMFMGGLSWDTTKKDLKDCFSKFGEVVDCTLKLDPITGRSRGFGFVLLKESESVDKV 164
>gi|431901789|gb|ELK08666.1| Heterogeneous nuclear ribonucleoprotein A1 [Pteropus alecto]
Length = 102
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Query: 60 EEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMV 118
+VD + P + +P A+ TV K+FVGG+K D E+ LR+Y Q+G E + ++
Sbjct: 6 HKVDGRVVEPQRSVSRDFQRPGAHLTVTKIFVGGIKEDTEQHRLRDYLEQYGKTEVIEIM 65
Query: 119 TNK-ETGAKRGFAFIEFND 136
T++ +G KRGFAF+ F++
Sbjct: 66 TDQGSSGKKRGFAFVTFDN 84
>gi|307178992|gb|EFN67508.1| RNA-binding protein squid [Camponotus floridanus]
Length = 327
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 87 KKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRG 145
+K+FVGGL + D +LRE+FS +G IES+N+ T+ TG RGFAFI F + +DKI G
Sbjct: 46 RKLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKIMG 105
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL + +DD++ +FSQFGTI V M +K ++GF FI F V
Sbjct: 120 KAKARHGKIFVGGLSTELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQV 179
Query: 140 VDKI 143
V+++
Sbjct: 180 VNEL 183
>gi|431912318|gb|ELK14452.1| Heterogeneous nuclear ribonucleoprotein A1-like protein 2 [Pteropus
alecto]
Length = 238
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 86 VKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
V K+FVGG++ D E LR+YF Q+G E + +VT++ +G KR FAF+ F+D+ VDK
Sbjct: 6 VTKVFVGGIEEDTEVPPLRDYFEQYGETEGIEIVTDRGSGKKRAFAFVTFDDHHSVDK 63
>gi|426232266|ref|XP_004010154.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Ovis aries]
Length = 421
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 223 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 277
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 278 ELPMDNKTNKRRGFCFITFKEEEPVKKI 305
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 164 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 220
>gi|340730010|ref|XP_003403285.1| PREDICTED: DAZ-associated protein 1-like [Bombus terrestris]
Length = 390
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 81 EANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+AN T KK+FVGG+ +D D+++ YF+QFG +E M+ +++T RGF F+ F + DV
Sbjct: 144 QANRT-KKIFVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDV 202
Query: 140 VDKI 143
VD++
Sbjct: 203 VDRV 206
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q + LREYF FGT+ V ++ + T RGF FI F + VDK+
Sbjct: 62 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKV 118
>gi|195036936|ref|XP_001989924.1| GH19060 [Drosophila grimshawi]
gi|193894120|gb|EDV92986.1| GH19060 [Drosophila grimshawi]
Length = 349
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + E +LR++F ++G IES+N+ T+ +TG RGFAFI F + + +D++
Sbjct: 59 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIDQV 116
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL + +++++ YFSQFGTI V M +K+ ++GF FI F+ V
Sbjct: 133 KAKARHGKIFVGGLTTEISDEEIKTYFSQFGTIVEVEMPFDKQKSHRKGFCFITFDSEQV 192
Query: 140 V 140
V
Sbjct: 193 V 193
>gi|1209409|emb|CAA90716.1| hnRNP protein [Chironomus tentans]
Length = 297
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 47/72 (65%), Gaps = 5/72 (6%)
Query: 73 DKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAF 131
D EIG+ + +K+FVGGL + E +LR++F Q+G I+S+N+ T+ TG RGFAF
Sbjct: 30 DSSEIGRDDD----RKLFVGGLSWETTEKELRDHFGQYGEIDSINVKTDPTTGRSRGFAF 85
Query: 132 IEFNDYDVVDKI 143
I + D +DK+
Sbjct: 86 IVYKSADSIDKV 97
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 57 QSEEEVDMEIPGPPHM-DKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIES 114
+S + +D + H+ + ++ +A A K+FVGGL + +D++R YF+QFG I
Sbjct: 89 KSADSIDKVVAAGDHIINNKKVDPKKAKARTGKIFVGGLIPEISDDEIRAYFAQFGNIVE 148
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ M +K+ ++ F FI F+ VV+++
Sbjct: 149 MEMPFDKQKNQRKAFCFITFDSETVVNEL 177
>gi|332374124|gb|AEE62203.1| unknown [Dendroctonus ponderosae]
Length = 290
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + D +LREYF ++G IES+N+ T+ TG RGFAFI F D +D++
Sbjct: 50 RKLFVGGLSWETTDKELREYFGKYGEIESINVKTDSMTGRSRGFAFIVFQDAASIDRV 107
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGG+ + +DD+ EYF Q+GTI V M +K+ ++GF FI F V
Sbjct: 124 KAKARHGKIFVGGISPELSDDDINEYFGQYGTIMEVEMPFDKQKNQRKGFCFITFESEQV 183
Query: 140 V 140
V
Sbjct: 184 V 184
>gi|357618214|gb|EHJ71282.1| hypothetical protein KGM_11355 [Danaus plexippus]
Length = 297
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 69 PPHMDKLEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKR 127
P H KP A KK+FVGG+ +D D++R YF+QFG +E M+ +++T R
Sbjct: 102 PKHATPKSAPKP---AKTKKIFVGGVGQDTSADEVRAYFAQFGAVEDAVMLMDQQTKRHR 158
Query: 128 GFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDKIVCK 163
GF F+ F+ + V+++ F + K+ CK
Sbjct: 159 GFGFVTFHSEEAVERVCDIHFHTIKN----KKVECK 190
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q + LREYF+ FG + V ++ + T RGF FI F + VDK+
Sbjct: 31 KLFVGGLSWQTSSEKLREYFAMFGAVTDVLIMKDPVTQRSRGFGFITFQEAASVDKV 87
>gi|441664953|ref|XP_004091786.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Nomascus leucogenys]
Length = 260
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 52/96 (54%), Gaps = 13/96 (13%)
Query: 60 EEVDMEIPGPPH------------MDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYF 106
EEVD + PH + + + KP + + KK+FVGG+K D EE LR+YF
Sbjct: 21 EEVDAPMNAKPHKVDGRAVDPKRAVSREDSQKPGGHLSAKKIFVGGIKEDIEEHYLRDYF 80
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
Q G I + ++ ++ +G KR F F+ +D D VDK
Sbjct: 81 EQHGRIAVIEIMMDQGSGKKRSFDFVTIDDCDSVDK 116
>gi|357119407|ref|XP_003561433.1| PREDICTED: DAZ-associated protein 1-like [Brachypodium distachyon]
Length = 376
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 61/122 (50%), Gaps = 5/122 (4%)
Query: 48 INNKAMEEAQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYF 106
+++ E+ Q + D + G + + G A+ + KK+FVGGL+D ED+ R YF
Sbjct: 113 VHHHQPEQGQDQGHQDNQTAG----NGVVDGDDSASYSSKKVFVGGLRDNITEDEFRAYF 168
Query: 107 SQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDKIVCKYNI 166
FGT+ V ++ + T RGF F+ F+ + V K+ G +F + V KI +
Sbjct: 169 EAFGTVTDVVVIYDSLTNRSRGFGFVTFDSEEAVRKVMGKSFHDLKGTRVEAKIAIPKDA 228
Query: 167 EF 168
+
Sbjct: 229 HY 230
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 87 KKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRG 145
+K+FVGG+ +E +LR +F++FG + SV ++ ++ETG RGF F+EF D K G
Sbjct: 22 RKLFVGGIPSSAQEGELRGHFARFGAVRSVVVMRDRETGHGRGFGFVEFEGEDAAAKALG 81
>gi|350421557|ref|XP_003492883.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like, partial
[Bombus impatiens]
Length = 241
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 81 EANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+AN T KK+FVGG+ +D D+++ YF+QFG +E M+ +++T RGF F+ F + DV
Sbjct: 144 QANRT-KKIFVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDV 202
Query: 140 VDKI 143
VD++
Sbjct: 203 VDRV 206
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q + LREYF FGT+ V ++ + T RGF FI F + VDK+
Sbjct: 62 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKV 118
>gi|221331233|ref|NP_001137961.1| RNA-binding protein 6, isoform D [Drosophila melanogaster]
gi|220902621|gb|ACL83316.1| RNA-binding protein 6, isoform D [Drosophila melanogaster]
Length = 162
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 1/68 (1%)
Query: 87 KKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRG 145
KK+FVGGL +D++ YF QFG IE ++ +K+T RGF F+ F DVVDK+
Sbjct: 6 KKIFVGGLSAPTTLEDVKSYFEQFGPIEDAMLMFDKQTNRHRGFGFVTFQSEDVVDKVCE 65
Query: 146 FAFIEFND 153
F E N+
Sbjct: 66 IHFHEINN 73
>gi|193716167|ref|XP_001946745.1| PREDICTED: RNA-binding protein squid-like [Acyrthosiphon pisum]
Length = 290
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 42/58 (72%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KK+FVGGL + E +LREYF+Q+G IE++N+ T+ +G RGFAF++F + VD +
Sbjct: 20 KKLFVGGLGRTISEKELREYFTQYGEIENINIKTDPFSGQSRGFAFVQFVNAKTVDDL 77
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL + E D+R YF QFG I +K K+GF FI F D +VV+++
Sbjct: 105 KIFVGGLTTEMTEQDVRNYFVQFGQISEYQQPFDKMKNQKKGFCFITFEDSEVVNQV 161
>gi|157110294|ref|XP_001651038.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878762|gb|EAT42987.1| AAEL005515-PF [Aedes aegypti]
Length = 325
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + D +L+E+F Q+G IES+N+ T+ TG RGFAFI + D +DK+
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKV 93
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 57 QSEEEVDMEIPGPPH-MDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIES 114
+S + +D + H ++ ++ +A A K+FVGGL + +++++ +F QFG I
Sbjct: 85 KSADSIDKVVAAGDHVINNKKVDPKKAKARHGKIFVGGLTTEISDEEIKTFFGQFGNIVE 144
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
V M +K+ ++GF FI F+ VV+++
Sbjct: 145 VEMPFDKQKNQRKGFCFITFDSEQVVNEL 173
>gi|324507426|gb|ADY43149.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 331
Score = 58.5 bits (140), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+ EAN + K++++ G+++ E+ +YFS +G + ++ +K TG RGFAF+ F+DY
Sbjct: 104 RNEANVSSKRLYISGVREGHTEEMFTDYFSNYGNVIKCEVIVDKNTGKPRGFAFVTFDDY 163
Query: 138 DVVDKI 143
D VDK
Sbjct: 164 DAVDKC 169
>gi|157110296|ref|XP_001651039.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|157110300|ref|XP_001651041.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878763|gb|EAT42988.1| AAEL005515-PG [Aedes aegypti]
gi|108878765|gb|EAT42990.1| AAEL005515-PC [Aedes aegypti]
Length = 300
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + D +L+E+F Q+G IES+N+ T+ TG RGFAFI + D +DK+
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKV 93
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 57 QSEEEVDMEIPGPPH-MDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIES 114
+S + +D + H ++ ++ +A A K+FVGGL + +++++ +F QFG I
Sbjct: 85 KSADSIDKVVAAGDHVINNKKVDPKKAKARHGKIFVGGLTTEISDEEIKTFFGQFGNIVE 144
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
V M +K+ ++GF FI F+ VV+++
Sbjct: 145 VEMPFDKQKNQRKGFCFITFDSEQVVNEL 173
>gi|327273004|ref|XP_003221273.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like [Anolis
carolinensis]
Length = 334
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P +KK+FVGGL D E+ +REYF FG +ES+
Sbjct: 137 QKEHKLNGKVIDPKRAKAMKTKEP-----IKKIFVGGLSPDTPEEKIREYFGGFGEVESI 191
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F D + V KI
Sbjct: 192 ELPMDNKTNKRRGFCFITFKDEEPVKKI 219
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YF++FG + + + TG RGF FI F + + VDK+
Sbjct: 78 KMFIGGLSWDTTKKDLKDYFTKFGEVVDCTLKLDPITGRSRGFGFILFKEAESVDKV 134
>gi|340382092|ref|XP_003389555.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A2 homolog
1-like [Amphimedon queenslandica]
Length = 344
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 46/75 (61%), Gaps = 6/75 (8%)
Query: 88 KMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
K+FVGGL D E L+EYF ++GTI + + + TG RGFAF+ F + D VDKI
Sbjct: 58 KLFVGGLTSDTTEQTLQEYFEEYGTISEIILKVDPITGRSRGFAFLLFKENDAVDKI--- 114
Query: 147 AFIEFNDYDVVDKIV 161
+E + + + DK+V
Sbjct: 115 --LEASPHTIGDKVV 127
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 86 VKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGA---KRGFAFIEFNDYDVVD 141
KK+FVGG+ D E ++E+F +FG IE V +VT K G+ +RGF F+ F D +
Sbjct: 145 TKKVFVGGVPTDMPEHTIKEHFEKFGPIEEVALVTEKGAGSNKKRRGFCFVTFLSEDTAE 204
Query: 142 KIRGFAFIEFNDYDV 156
K +F + N+ DV
Sbjct: 205 KACCNSFHKINESDV 219
>gi|328779378|ref|XP_003249642.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like, partial
[Apis mellifera]
Length = 212
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 81 EANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+AN T KK+FVGG+ +D D+++ YF+QFG +E M+ +++T RGF F+ F + DV
Sbjct: 144 QANRT-KKIFVGGVSQDTSSDEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDV 202
Query: 140 VDKI 143
VD++
Sbjct: 203 VDRV 206
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q + LREYF FGT+ V ++ + T RGF FI F + VDK+
Sbjct: 62 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKV 118
>gi|405977312|gb|EKC41770.1| Heterogeneous nuclear ribonucleoprotein 27C [Crassostrea gigas]
Length = 569
Score = 58.5 bits (140), Expect = 9e-07, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 42/70 (60%)
Query: 87 KKMFVGGLKDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
KK+F+GGL + +ED LR +F ++G + VN++ +++ RGF F+ F D VD++
Sbjct: 147 KKIFMGGLPNVDEDFLRNFFGKYGKVLDVNIMIDQQNKKSRGFGFLTFESEDAVDQVCAE 206
Query: 147 AFIEFNDYDV 156
FI N V
Sbjct: 207 HFININGKQV 216
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KK+F+GGL D ++D L +FSQ+G + ++ N++TG RGF F+ FND VD +
Sbjct: 41 KKLFIGGLSWDTDQDSLLNFFSQYGEVIDCVVMKNQQTGKSRGFGFVTFNDAQCVDTV 98
>gi|324506130|gb|ADY42625.1| Heterogeneous nuclear ribonucleoprotein A1 [Ascaris suum]
Length = 346
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+ EAN + K++++ G+++ E+ +YFS +G + ++ +K TG RGFAF+ F+DY
Sbjct: 104 RNEANVSSKRLYISGVREGHTEEMFTDYFSNYGNVIKCEVIVDKNTGKPRGFAFVTFDDY 163
Query: 138 DVVDKI 143
D VDK
Sbjct: 164 DAVDKC 169
>gi|157110298|ref|XP_001651040.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|157110302|ref|XP_001651042.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878764|gb|EAT42989.1| AAEL005515-PD [Aedes aegypti]
gi|108878766|gb|EAT42991.1| AAEL005515-PA [Aedes aegypti]
Length = 280
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + D +L+E+F Q+G IES+N+ T+ TG RGFAFI + D +DK+
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKV 93
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 57 QSEEEVDMEIPGPPH-MDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIES 114
+S + +D + H ++ ++ +A A K+FVGGL + +++++ +F QFG I
Sbjct: 85 KSADSIDKVVAAGDHVINNKKVDPKKAKARHGKIFVGGLTTEISDEEIKTFFGQFGNIVE 144
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
V M +K+ ++GF FI F+ VV+++
Sbjct: 145 VEMPFDKQKNQRKGFCFITFDSEQVVNEL 173
>gi|340377267|ref|XP_003387151.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Amphimedon
queenslandica]
Length = 403
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 4/76 (5%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
KP + ++++FVGGL D +EDD++E+F FG +E V ++ +K T RGF F+ F
Sbjct: 138 KPTPASQIRRIFVGGLSSDTDEDDMKEFFEVFGPVEEVQLMYDKHTNRHRGFGFVTFEKV 197
Query: 138 DVVDKIRGFAFIEFND 153
K+ I+F+D
Sbjct: 198 GPAAKV---CSIQFHD 210
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+F+G L D E+ L YF +FG I ++ + TG RGF FI F D + + I
Sbjct: 55 KLFIGALSNDTSEETLEAYFKKFGVILECTIMKDG-TGKSRGFGFITFKDANSIQCI 110
>gi|119626277|gb|EAX05872.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_a [Homo sapiens]
Length = 377
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 157 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 211
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 212 ELPMDNKTNKRRGFCFITFKEEEPVKKI 239
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 154
>gi|444723247|gb|ELW63906.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Tupaia
chinensis]
Length = 296
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 110 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 164
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 165 ELPMDNKTNKRRGFCFITFKEEEPVKKI 192
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 51 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 107
>gi|157110304|ref|XP_001651043.1| heterogeneous nuclear ribonucleoprotein [Aedes aegypti]
gi|108878767|gb|EAT42992.1| AAEL005515-PE [Aedes aegypti]
Length = 285
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + D +L+E+F Q+G IES+N+ T+ TG RGFAFI + D +DK+
Sbjct: 36 RKLFVGGLSWETSDKELKEHFGQYGEIESINVKTDPNTGRSRGFAFIVYKSADSIDKV 93
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 57 QSEEEVDMEIPGPPH-MDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIES 114
+S + +D + H ++ ++ +A A K+FVGGL + +++++ +F QFG I
Sbjct: 85 KSADSIDKVVAAGDHVINNKKVDPKKAKARHGKIFVGGLTTEISDEEIKTFFGQFGNIVE 144
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
V M +K+ ++GF FI F+ VV+++
Sbjct: 145 VEMPFDKQKNQRKGFCFITFDSEQVVNEL 173
>gi|354497793|ref|XP_003511003.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Cricetulus griseus]
Length = 286
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 88 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 142
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 143 ELPMDNKTNKRRGFCFITFKEEEPVKKI 170
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 29 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 85
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 55/97 (56%), Gaps = 5/97 (5%)
Query: 59 EEEVDMEIPGPPHMDKLEIGKPEA--NATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
E VD+ P PP D G+ EA +A +F+G L + ED++RE FSQ+G + SV
Sbjct: 252 EIRVDVSTPKPPR-DGNRQGRKEAPQSAPTTTLFLGNLSFNVTEDEIRESFSQYGQLVSV 310
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDK-IRGFAFIEF 151
T+++TGA +GF ++E+ D + K + G +E
Sbjct: 311 RFPTDRDTGAFKGFGYVEYGDVETAQKAVEGLNGVEI 347
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 4/75 (5%)
Query: 83 NATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N+TV FVG L + +E+ L F+ GT+ES ++T+KETG +GF ++ F D +
Sbjct: 182 NSTV---FVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYVTFESADALT 238
Query: 142 KIRGFAFIEFNDYDV 156
E + ++
Sbjct: 239 AAMALTGTELDGREI 253
>gi|334310867|ref|XP_001381121.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Monodelphis domestica]
Length = 376
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 86 VKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
VKK+FVGGL + ED +REYF FG IES+ + + +T +RGF FI F + D V KI
Sbjct: 180 VKKIFVGGLNPEATEDKIREYFGDFGEIESIELPMDPKTNKRRGFVFITFKEEDPVKKI 238
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 73 DKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAF 131
D++ K E +A KMFVGGL D + DL++YF++FG + + + TG RGF F
Sbjct: 85 DQINASKNEEDAG--KMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGF 142
Query: 132 IEFNDYDVVDKI 143
I F + VDK+
Sbjct: 143 ILFKESASVDKV 154
>gi|426344801|ref|XP_004038942.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Gorilla gorilla gorilla]
Length = 291
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 93 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 147
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 148 ELPMDNKTNKRRGFCFITFKEEEPVKKI 175
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 34 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 90
>gi|345327974|ref|XP_001505245.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Ornithorhynchus anatinus]
Length = 306
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 108 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 162
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 163 ELPMDNKTNKRRGFCFITFKEEEPVKKI 190
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 49 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKEAESVDKV 105
>gi|395542043|ref|XP_003772944.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Sarcophilus
harrisii]
Length = 306
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 108 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 162
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 163 ELPMDNKTNKRRGFCFITFKEEEPVKKI 190
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 49 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 105
>gi|170051646|ref|XP_001861859.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
gi|167872815|gb|EDS36198.1| heterogeneous nuclear ribonucleoprotein [Culex quinquefasciatus]
Length = 308
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + D +L+E+F Q+G IES+N+ T+ TG RGFAFI + D +DK+
Sbjct: 40 RKLFVGGLSWETSDKELKEHFGQYGDIESINVKTDPNTGRSRGFAFIVYKSADSIDKV 97
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 2/89 (2%)
Query: 57 QSEEEVDMEIPGPPH-MDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIES 114
+S + +D + H ++ ++ +A A K+FVGGL + +D+++ +F QFG I
Sbjct: 89 KSADSIDKVVAAGDHVINNKKVDPKKAKARHGKIFVGGLTTEISDDEIKTFFGQFGNIVD 148
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
V M +K+ ++GF FI F+ VV+++
Sbjct: 149 VEMPFDKQKNQRKGFCFITFDSEQVVNEL 177
>gi|171451952|dbj|BAG15904.1| musashi [Dugesia japonica]
Length = 463
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 86 VKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIR 144
KK+F+GG+ + + +L EYFSQFG +E+ ++ +K T RGF F+ F + D +K+
Sbjct: 142 TKKVFIGGISTNTTKQELEEYFSQFGILETCELMMDKATSRHRGFGFVTFENEDTAEKVC 201
Query: 145 GFAFIEFNDYDV 156
F + N+ V
Sbjct: 202 DIHFHDLNNKTV 213
Score = 39.7 bits (91), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL + +R+YF ++G I+ ++ + T RGF F+ F + V K+
Sbjct: 29 KMFIGGLSPTTSPETMRDYFRKYGDIKEFMIMRDPVTKRSRGFGFVTFFESSSVKKV 85
>gi|443724647|gb|ELU12551.1| hypothetical protein CAPTEDRAFT_175465 [Capitella teleta]
Length = 314
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 49/80 (61%), Gaps = 7/80 (8%)
Query: 85 TVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
TVKK+FVGGL ++ ++ ++ +F QFG + V+ ++++G RGFA++ FND D VDK
Sbjct: 86 TVKKIFVGGLSRNTTKESIQAFFEQFGGVSDVDCPLDQKSGLGRGFAYVTFNDSDPVDK- 144
Query: 144 RGFAFIEFNDYDVVDKIVCK 163
+ Y ++D C+
Sbjct: 145 -----VSLIHYHMIDGRRCE 159
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Query: 86 VKKMFVGGLKDQEEDD-LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
++K+F+GGL D+ LREYFS FGTIE +V TG R F F+ ++ +VD
Sbjct: 1 MRKLFIGGLNISTTDESLREYFSAFGTIEDC-VVLKDSTGRSRCFGFVVYSSSAIVD 56
>gi|351695030|gb|EHA97948.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Heterocephalus
glaber]
Length = 277
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 79 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 133
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 134 ELPMDNKTNKRRGFCFITFKEEEPVKKI 161
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 20 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 76
>gi|156387445|ref|XP_001634214.1| predicted protein [Nematostella vectensis]
gi|156221294|gb|EDO42151.1| predicted protein [Nematostella vectensis]
Length = 177
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 43/62 (69%), Gaps = 2/62 (3%)
Query: 83 NATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
N +KK++VGGLK++ E+++RE+F Q+G I +N+V E G +GF F+ F+D D VD
Sbjct: 6 NPDIKKLYVGGLKEETTEENIREHFQQYGEITELNLVRTPE-GKSKGFCFVSFSDSDSVD 64
Query: 142 KI 143
I
Sbjct: 65 NI 66
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 43/67 (64%), Gaps = 3/67 (4%)
Query: 80 PEANATVKKMFVGGLKD-QEEDDLREYFSQFGTI--ESVNMVTNKETGAKRGFAFIEFND 136
P A+ KK+FVGGLK+ Q E+D++ ++ ES+ ++ +K T +G+AF+ FN+
Sbjct: 93 PLAHVRTKKLFVGGLKNEQTEEDIKTALAEMVPFPPESIKLMKDKMTNKFKGYAFVNFNN 152
Query: 137 YDVVDKI 143
+VDK+
Sbjct: 153 EHIVDKL 159
>gi|440898655|gb|ELR50103.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Bos grunniens
mutus]
Length = 277
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 79 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 133
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 134 ELPMDNKTNKRRGFCFITFKEEEPVKKI 161
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 20 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 76
>gi|307180208|gb|EFN68241.1| RNA-binding protein squid [Camponotus floridanus]
Length = 296
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + D +LRE+FS +G IES+N+ T+ TG RGFAFI F + +DKI
Sbjct: 49 RKLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDKI 106
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL + +DD++ +FSQFG I V M +K ++GF FI F V
Sbjct: 123 KAKARHGKIFVGGLSTELSDDDIKNFFSQFGNIVEVEMPFDKTKNQRKGFCFITFESEQV 182
Query: 140 VDKI 143
V+++
Sbjct: 183 VNEL 186
>gi|148233348|ref|NP_001084040.1| musashi RNA-binding protein 1 [Xenopus laevis]
gi|214630|gb|AAA49919.1| pot. RNA-binding protein (nrp-1B); putative [Xenopus laevis]
Length = 347
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 79 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 137
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+KI F E N+
Sbjct: 138 AMLMFDKTTNRHRGFGFVTFEGEDIVEKICDIHFHEINN 176
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 77 IGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
+ P++ KMF+GGL Q ++ LREYFS FG ++ ++ + T RGF F+ F
Sbjct: 10 LSPPDSAHDPCKMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFM 69
Query: 136 DYDVVDKIRGFAFIEFNDYDVVDKIV 161
D VDK+ + E + + K+
Sbjct: 70 DQAGVDKVLAQSRHELDSKTIDPKVA 95
>gi|71896731|ref|NP_001026314.1| heterogeneous nuclear ribonucleoprotein D0 [Gallus gallus]
gi|326918726|ref|XP_003205639.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Meleagris gallopavo]
gi|53135954|emb|CAG32472.1| hypothetical protein RCJMB04_26e18 [Gallus gallus]
Length = 257
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 59 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGAFGEVESI 113
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 114 ELPMDNKTNKRRGFCFITFKEEEPVKKI 141
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 89 MFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
MF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 56
>gi|432858970|ref|XP_004069029.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Oryzias
latipes]
Length = 299
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQ+ E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 58 AQNRHELDSKTIDP-KVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDD 116
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F + DVV+K+ F E N+
Sbjct: 117 AMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINN 155
Score = 42.4 bits (98), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 89 MFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
MF+GGL Q ++ LREYF +FG ++ ++ + T RGF F+ + D V+++
Sbjct: 1 MFIGGLSWQTTQEGLREYFGKFGEVKECMVMRDPVTKRSRGFGFVTYADQAGVEQV 56
>gi|332028567|gb|EGI68604.1| RNA-binding protein squid [Acromyrmex echinatior]
Length = 316
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + D +LRE+FS +G IES+N+ T+ TG RGFAFI F + +DKI
Sbjct: 44 RKLFVGGLSWETTDKELREHFSAYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKI 101
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 49/86 (56%), Gaps = 2/86 (2%)
Query: 60 EEVDMEIPGPPH-MDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNM 117
E +D + H ++ ++ +A A K+FVGGL + +DD++ +FSQFGTI V M
Sbjct: 96 ESLDKIMSAGDHVINNKKVDPKKAKARHGKIFVGGLSTELSDDDIKNFFSQFGTIVEVEM 155
Query: 118 VTNKETGAKRGFAFIEFNDYDVVDKI 143
+K ++GF FI F VV+++
Sbjct: 156 PFDKTKNQRKGFCFITFESEQVVNEL 181
>gi|221114449|ref|XP_002154409.1| PREDICTED: uncharacterized protein LOC100213955 [Hydra
magnipapillata]
Length = 397
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 61 EVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVT 119
EV +P P + G +K+FVGGL EDDLR +F +FG + V+++
Sbjct: 90 EVKRALPKVPGGN---AGTSRTGGLYRKVFVGGLPSSITEDDLRSHFEKFGAVHEVDLLR 146
Query: 120 NKETGAKRGFAFIEFNDYDVVDK 142
+++T RGFAF+ F D D DK
Sbjct: 147 DRDTNRLRGFAFVTFEDEDSADK 169
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 46/82 (56%), Gaps = 7/82 (8%)
Query: 81 EANATVKKMFVGGLK--DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
EA+ +K+F+GGL +ED LR++F ++G I V ++ + + + RGF F+ F +
Sbjct: 9 EADEQERKLFIGGLNKYHTDEDRLRKFFCEYGKIVDVTIMRDNDKQS-RGFGFVLFENAS 67
Query: 139 VVDKI----RGFAFIEFNDYDV 156
V+ I + A E +D+ +
Sbjct: 68 SVNDIIANKKAGASFELDDHQI 89
>gi|322786135|gb|EFZ12742.1| hypothetical protein SINV_01194 [Solenopsis invicta]
Length = 330
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + D +LRE+FS +G IES+N+ T+ TG RGFAFI F + +DKI
Sbjct: 44 RKLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDKI 101
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL + +DD++ +FSQFG I V M +K ++GF FI F V
Sbjct: 118 KAKARHGKIFVGGLSTELSDDDIKNFFSQFGNIVEVEMPFDKTKNQRKGFCFITFESEQV 177
Query: 140 VDKI 143
V+++
Sbjct: 178 VNEL 181
>gi|296196172|ref|XP_002745745.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Callithrix jacchus]
Length = 325
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 127 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 181
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 182 ELPMDNKTNKRRGFCFITFKEEEPVKKI 209
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 68 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 124
>gi|431916163|gb|ELK16415.1| Heterogeneous nuclear ribonucleoprotein D0 [Pteropus alecto]
Length = 334
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 138 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 192
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 193 ELPMDNKTNKRRGFCFITFKEEEPVKKI 220
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 135
>gi|195329216|ref|XP_002031307.1| GM25920 [Drosophila sechellia]
gi|194120250|gb|EDW42293.1| GM25920 [Drosophila sechellia]
Length = 345
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + E +LR++F ++G IES+N+ T+ +TG RGFAFI F + + ++K+
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIEKV 113
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL + +++++ YF QFG I V M +K+ ++GF FI F+ V
Sbjct: 130 KAKARHGKIFVGGLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQV 189
Query: 140 V 140
V
Sbjct: 190 V 190
>gi|54647597|gb|AAH84959.1| Msi1h protein [Xenopus laevis]
Length = 321
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 79 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 137
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+KI F E N+
Sbjct: 138 AMLMFDKTTNRHRGFGFVTFEGEDIVEKICDIHFHEINN 176
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 77 IGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
+ P++ KMF+GGL Q ++ LREYFS FG ++ ++ + T RGF F+ F
Sbjct: 10 LSPPDSAHDPCKMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFM 69
Query: 136 DYDVVDKI 143
D VDK+
Sbjct: 70 DQAGVDKV 77
>gi|449499935|ref|XP_004175398.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Taeniopygia
guttata]
Length = 340
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 120 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 174
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 175 ELPMDNKTNKRRGFCFITFKEEEPVKKI 202
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 61 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 117
>gi|410957357|ref|XP_003985295.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0, partial
[Felis catus]
Length = 290
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 92 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 146
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 147 ELPMDNKTNKRRGFCFITFKEEEPVKKI 174
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 33 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 89
>gi|410922319|ref|XP_003974630.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 3
[Takifugu rubripes]
Length = 363
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQ+ E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 79 AQTRHELDSKTIDP-KVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDD 137
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F + DVV+K+ F E N+
Sbjct: 138 AMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINN 176
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q ++ L+EYF ++G ++ ++ + T RGF F+ F D VDK+
Sbjct: 21 KMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKV 77
>gi|119626284|gb|EAX05879.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_f [Homo sapiens]
Length = 277
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 128 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 182
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 183 ELPMDNKTNKRRGFCFITFKEEEPVKKI 210
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 69 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 125
>gi|211826253|gb|AAH11172.2| Hnrnpd protein [Mus musculus]
Length = 351
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 153 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 207
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 208 ELPMDNKTNKRRGFCFITFKEEEPVKKI 235
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 94 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 150
>gi|350588024|ref|XP_003482537.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like [Sus
scrofa]
Length = 201
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 3 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 57
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 58 ELPMDNKTNKRRGFCFITFKEEEPVKKI 85
>gi|302307303|ref|NP_983936.2| ADL160Wp [Ashbya gossypii ATCC 10895]
gi|299788936|gb|AAS51760.2| ADL160Wp [Ashbya gossypii ATCC 10895]
gi|374107149|gb|AEY96057.1| FADL160Wp [Ashbya gossypii FDAG1]
Length = 526
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
K + + + KMF+GGL + ED+LREYFS++G + V ++ + TG RGF F+ F D
Sbjct: 155 KADLSRDINKMFIGGLNWETTEDNLREYFSKYGNVTEVKIMRDGTTGRSRGFGFLSFADA 214
Query: 138 DVVDKI 143
VD++
Sbjct: 215 SSVDEV 220
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
Query: 88 KMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
K+FVGG+ D + E+FSQ+G+I ++ +K+TG RGF FI ++ D VD++
Sbjct: 248 KIFVGGIGPDVRPKEFEEFFSQWGSIIDAQLMLDKDTGRSRGFGFITYDSPDAVDRVCQN 307
Query: 147 AFIEF 151
FIEF
Sbjct: 308 KFIEF 312
>gi|47217577|emb|CAG02504.1| unnamed protein product [Tetraodon nigroviridis]
Length = 333
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQ+ E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 41 AQTRHELDSKTIDP-KVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDD 99
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F + DVV+K+ F E N+
Sbjct: 100 AMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINN 138
>gi|301790887|ref|XP_002930448.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Ailuropoda
melanoleuca]
Length = 360
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 77 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 135
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 136 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 174
Score = 40.8 bits (94), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 100 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDK 159
+ LREYF QFG ++ ++ + T RGF F+ F D VDK+ + E + + K
Sbjct: 32 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 91
Query: 160 IV 161
+
Sbjct: 92 VA 93
>gi|148878011|gb|AAI46039.1| HNRNPD protein [Bos taurus]
Length = 355
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 157 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 211
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 212 ELPMDNKTNKRRGFCFITFKEEEPVKKI 239
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 154
>gi|116256512|ref|NP_001070733.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Mus musculus]
gi|33516945|sp|Q60668.2|HNRPD_MOUSE RecName: Full=Heterogeneous nuclear ribonucleoprotein D0;
Short=hnRNP D0; AltName: Full=AU-rich element
RNA-binding protein 1
gi|148688367|gb|EDL20314.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_d [Mus
musculus]
Length = 355
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 157 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 211
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 212 ELPMDNKTNKRRGFCFITFKEEEPVKKI 239
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 154
>gi|410976792|ref|XP_003994797.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Felis catus]
Length = 380
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 97 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 155
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 156 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 194
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 91 VGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFI 149
+GGL Q ++ LREYF QFG ++ ++ + T RGF F+ F D VDK+ +
Sbjct: 42 IGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRH 101
Query: 150 EFNDYDVVDKIV 161
E + + K+
Sbjct: 102 ELDSKTIDPKVA 113
>gi|380806927|gb|AFE75339.1| RNA-binding protein Musashi homolog 1, partial [Macaca mulatta]
Length = 216
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 35 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 93
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 94 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 132
>gi|332027282|gb|EGI67366.1| RNA-binding protein squid [Acromyrmex echinatior]
Length = 306
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + D +LRE+FS +G IES+N+ T+ TG RGFAFI F + +DKI
Sbjct: 47 RKLFVGGLSWETTDKELREHFSTYGDIESINVKTDPNTGRSRGFAFIVFAKAEALDKI 104
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL + +DD++ +FSQFG I V M +K ++GF FI F V
Sbjct: 121 KAKARHGKIFVGGLSTELSDDDIKNFFSQFGNIVEVEMPFDKTKNQRKGFCFITFESEQV 180
Query: 140 VDKI 143
V+++
Sbjct: 181 VNEL 184
>gi|291243919|ref|XP_002741849.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D-like
[Saccoglossus kowalevskii]
Length = 415
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 46/75 (61%), Gaps = 5/75 (6%)
Query: 70 PHMDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRG 128
P K G+P + K+FVGGL + E++LR+YF++FG I+ V + ++ T +RG
Sbjct: 155 PKRAKARGGQPP----ITKIFVGGLNPEYPENELRDYFTKFGAIKEVELPIDRATNKRRG 210
Query: 129 FAFIEFNDYDVVDKI 143
F FIEF D V++I
Sbjct: 211 FCFIEFEKEDSVEEI 225
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL + + DL+EYF +FG + + + TG RGF F+ F D V+K+
Sbjct: 84 KLFVGGLSWETTQKDLKEYFKKFGPVVDCTIKIDPVTGRSRGFGFVLFADGASVEKV 140
>gi|195571113|ref|XP_002103548.1| GD20486 [Drosophila simulans]
gi|194199475|gb|EDX13051.1| GD20486 [Drosophila simulans]
Length = 345
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + E +LR++F ++G IES+N+ T+ +TG RGFAFI F + + ++K+
Sbjct: 56 RKLFVGGLSWETTEKELRDHFGKYGEIESINVKTDPQTGRSRGFAFIVFTNTEAIEKV 113
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 80 PEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+A A K+FVG L + +++++ YF QFG I V M +K+ ++GF FI F+
Sbjct: 129 PKAKARHGKIFVGFLTTEISDEEIKTYFGQFGNIVEVEMPFDKQKSQRKGFCFITFDSEQ 188
Query: 139 VV 140
VV
Sbjct: 189 VV 190
>gi|195390397|ref|XP_002053855.1| GJ23113 [Drosophila virilis]
gi|194151941|gb|EDW67375.1| GJ23113 [Drosophila virilis]
Length = 343
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 43/58 (74%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + E +LR++F +FG IES+N+ T+ +TG RGFAFI F + + ++++
Sbjct: 57 RKLFVGGLSWETTEKELRDHFGKFGEIESINVKTDPQTGRSRGFAFIVFTNTEAIEQV 114
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL + +++++ YFSQFG I V M +K+ ++GF FI F+ V
Sbjct: 131 KAKARHGKIFVGGLTTEISDEEIKTYFSQFGNIVEVEMPFDKQKSHRKGFCFITFDSEQV 190
Query: 140 V 140
V
Sbjct: 191 V 191
>gi|395834193|ref|XP_003790096.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Otolemur garnettii]
Length = 355
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 157 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 211
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 212 ELPMDNKTNKRRGFCFITFKEEEPVKKI 239
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 154
>gi|355765936|gb|EHH62474.1| Heterogeneous nuclear ribonucleoprotein D0, partial [Macaca
fascicularis]
Length = 302
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 104 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 158
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 159 ELPMDNKTNKRRGFCFITFKEEEPVKKI 186
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 45 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 101
>gi|344249843|gb|EGW05947.1| Heterogeneous nuclear ribonucleoprotein D0 [Cricetulus griseus]
Length = 257
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 59 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 113
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 114 ELPMDNKTNKRRGFCFITFKEEEPVKKI 141
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 89 MFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
MF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 56
>gi|14110420|ref|NP_112738.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Homo sapiens]
gi|386782249|ref|NP_001247736.1| heterogeneous nuclear ribonucleoprotein D0 [Macaca mulatta]
gi|114594005|ref|XP_001143807.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Pan troglodytes]
gi|297673867|ref|XP_002814969.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Pongo abelii]
gi|402869391|ref|XP_003898746.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Papio anubis]
gi|13124489|sp|Q14103.1|HNRPD_HUMAN RecName: Full=Heterogeneous nuclear ribonucleoprotein D0;
Short=hnRNP D0; AltName: Full=AU-rich element
RNA-binding protein 1
gi|870749|dbj|BAA09525.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
gi|2815612|gb|AAC23474.1| heterogeneous nuclear ribonucleoprotein D [Homo sapiens]
gi|12803191|gb|AAH02401.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|63990762|gb|AAY40913.1| unknown [Homo sapiens]
gi|119626280|gb|EAX05875.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_d [Homo sapiens]
gi|119626281|gb|EAX05876.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_d [Homo sapiens]
gi|123982850|gb|ABM83166.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [synthetic construct]
gi|123997529|gb|ABM86366.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [synthetic construct]
gi|355687289|gb|EHH25873.1| Heterogeneous nuclear ribonucleoprotein D0 [Macaca mulatta]
gi|380783619|gb|AFE63685.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
gi|383417965|gb|AFH32196.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
gi|384940052|gb|AFI33631.1| heterogeneous nuclear ribonucleoprotein D0 isoform a [Macaca
mulatta]
Length = 355
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 157 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 211
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 212 ELPMDNKTNKRRGFCFITFKEEEPVKKI 239
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 154
>gi|410922315|ref|XP_003974628.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Takifugu rubripes]
Length = 348
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQ+ E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 79 AQTRHELDSKTIDP-KVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDD 137
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F + DVV+K+ F E N+
Sbjct: 138 AMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINN 176
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q ++ L+EYF ++G ++ ++ + T RGF F+ F D VDK+
Sbjct: 21 KMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKV 77
>gi|410351149|gb|JAA42178.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 356
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 158 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 212
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 213 ELPMDNKTNKRRGFCFITFKEEEPVKKI 240
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 99 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 155
>gi|397524667|ref|XP_003832310.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein D0 [Pan paniscus]
Length = 355
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 157 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 211
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 212 ELPMDNKTNKRRGFCFITFKEEEPVKKI 239
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 154
>gi|395744950|ref|XP_002823898.2| PREDICTED: RNA-binding protein Musashi homolog 1, partial [Pongo
abelii]
Length = 302
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 30 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 88
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 89 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 127
>gi|403263352|ref|XP_003924001.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Saimiri boliviensis boliviensis]
Length = 355
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 157 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 211
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 212 ELPMDNKTNKRRGFCFITFKEEEPVKKI 239
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 154
>gi|74001715|ref|XP_857957.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 11
[Canis lupus familiaris]
Length = 355
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 157 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 211
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 212 ELPMDNKTNKRRGFCFITFKEEEPVKKI 239
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 154
>gi|403281821|ref|XP_003932373.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Saimiri
boliviensis boliviensis]
Length = 352
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 80 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 138
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 139 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 177
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q ++ LREYF QFG ++ ++ + T RGF F+ F D VDK+
Sbjct: 22 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKV 78
>gi|355786585|gb|EHH66768.1| hypothetical protein EGM_03821 [Macaca fascicularis]
Length = 324
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 60 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 118
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 119 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 157
>gi|332233349|ref|XP_003265864.1| PREDICTED: LOW QUALITY PROTEIN: heterogeneous nuclear
ribonucleoprotein D0 [Nomascus leucogenys]
Length = 355
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 157 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 211
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 212 ELPMDNKTNKRRGFCFITFKEEEPVKKI 239
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 154
>gi|16266931|dbj|BAB70469.1| Musashi1 [Homo sapiens]
Length = 179
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 13 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 71
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 72 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 110
>gi|348516192|ref|XP_003445623.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Oreochromis
niloticus]
Length = 329
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQ+ E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 79 AQTRHELDSKTIDP-KVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDD 137
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F + DVV+K+ F E N+
Sbjct: 138 AMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINN 176
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q ++ L+EYF ++G ++ ++ + T RGF F+ F D VDK+
Sbjct: 21 KMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKV 77
>gi|116256514|ref|NP_031542.2| heterogeneous nuclear ribonucleoprotein D0 isoform c [Mus musculus]
gi|29145079|gb|AAH49098.1| Heterogeneous nuclear ribonucleoprotein D [Mus musculus]
gi|148688366|gb|EDL20313.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_c [Mus
musculus]
Length = 306
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 157 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 211
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 212 ELPMDNKTNKRRGFCFITFKEEEPVKKI 239
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 154
>gi|410922321|ref|XP_003974631.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 4
[Takifugu rubripes]
Length = 341
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQ+ E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 79 AQTRHELDSKTIDP-KVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDD 137
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F + DVV+K+ F E N+
Sbjct: 138 AMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINN 176
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q ++ L+EYF ++G ++ ++ + T RGF F+ F D VDK+
Sbjct: 21 KMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKV 77
>gi|410922317|ref|XP_003974629.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Takifugu rubripes]
Length = 329
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQ+ E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 79 AQTRHELDSKTIDP-KVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDD 137
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F + DVV+K+ F E N+
Sbjct: 138 AMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINN 176
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q ++ L+EYF ++G ++ ++ + T RGF F+ F D VDK+
Sbjct: 21 KMFIGGLSWQTTQEGLKEYFCKYGEVKECMVMRDPVTKRSRGFGFVTFVDQAGVDKV 77
>gi|391332405|ref|XP_003740625.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like
[Metaseiulus occidentalis]
Length = 259
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 80 PEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ KK+FVGGL +D++ YF QFG IE ++ +K+T RGF F+ F D
Sbjct: 104 PKMVTRTKKVFVGGLSAPTTLEDVKNYFQQFGRIEDAMLMFDKQTNRHRGFGFVTFELED 163
Query: 139 VVDKIRGFAFIEFND 153
VVDK+ F E N+
Sbjct: 164 VVDKVCEVHFHEINN 178
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
EA KMF+GGL Q + LREYFS+FG I V ++ + T RGF F+ F D
Sbjct: 16 EAAHDPGKMFIGGLSWQTAPEGLREYFSKFGEISEVMVMKDPTTRRSRGFGFVTFADPAS 75
Query: 140 VDKI 143
V+K+
Sbjct: 76 VEKV 79
>gi|323331635|gb|EGA73049.1| Hrp1p [Saccharomyces cerevisiae AWRI796]
Length = 521
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 74 KLEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
K I + E + T K+FVGG+ D + E+FSQ+GTI ++ +K+TG RGF F+
Sbjct: 218 KRAIPRDEQDKT-GKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFV 276
Query: 133 EFNDYDVVDKIRGFAFIEFNDYDV 156
++ D VD++ FI+F D +
Sbjct: 277 TYDSADAVDRVCQNKFIDFKDRKI 300
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
K E K + + KMF+GGL D ED+LREYF ++GT+ + ++ + TG RGF F+
Sbjct: 133 KEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFL 192
Query: 133 EFNDYDVVDKI 143
F VD++
Sbjct: 193 SFEKPSSVDEV 203
>gi|148230364|ref|NP_001091533.1| heterogeneous nuclear ribonucleoprotein D0 [Bos taurus]
gi|146231918|gb|ABQ13034.1| heterogeneous nuclear ribonucleoprotein D [Bos taurus]
gi|296486390|tpg|DAA28503.1| TPA: heterogeneous nuclear ribonucleoprotein D [Bos taurus]
Length = 306
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 157 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 211
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 212 ELPMDNKTNKRRGFCFITFKEEEPVKKI 239
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 154
>gi|194382812|dbj|BAG64576.1| unnamed protein product [Homo sapiens]
Length = 201
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 3 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 57
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 58 ELPMDNKTNKRRGFCFITFKEEEPVKKI 85
>gi|14110414|ref|NP_002129.2| heterogeneous nuclear ribonucleoprotein D0 isoform c [Homo sapiens]
gi|114594009|ref|XP_001143722.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Pan troglodytes]
gi|395735083|ref|XP_003776519.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Pongo abelii]
gi|402869389|ref|XP_003898745.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Papio anubis]
gi|870745|dbj|BAA09523.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
gi|2815613|gb|AAC23475.1| heterogeneous nuclear ribonucleoprotein D [Homo sapiens]
gi|18645125|gb|AAH23977.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|19683928|gb|AAH26015.1| Heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Homo sapiens]
gi|119626282|gb|EAX05877.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|119626286|gb|EAX05881.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|119626287|gb|EAX05882.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_e [Homo sapiens]
gi|208966456|dbj|BAG73242.1| heterogeneous nuclear ribonucleoprotein D [synthetic construct]
gi|380783617|gb|AFE63684.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|383417963|gb|AFH32195.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|384940050|gb|AFI33630.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Macaca
mulatta]
gi|410265342|gb|JAA20637.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
gi|410292488|gb|JAA24844.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 306
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 157 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 211
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 212 ELPMDNKTNKRRGFCFITFKEEEPVKKI 239
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 154
>gi|410351151|gb|JAA42179.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 307
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 158 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 212
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 213 ELPMDNKTNKRRGFCFITFKEEEPVKKI 240
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 99 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 155
>gi|433344|gb|AAC50056.1| p37 AUF1 [Homo sapiens]
Length = 286
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 136 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 190
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 191 ELPMDNKTNKRRGFCFITFKEEEPVKKI 218
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 77 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 133
>gi|355564741|gb|EHH21241.1| hypothetical protein EGK_04258 [Macaca mulatta]
Length = 324
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 60 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 118
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 119 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 157
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 100 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ LREYF QFG ++ ++ + T RGF F+ F D VDK+
Sbjct: 15 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKV 58
>gi|303245896|ref|ZP_07332178.1| RNP-1 like RNA-binding protein [Desulfovibrio fructosovorans JJ]
gi|302492679|gb|EFL52547.1| RNP-1 like RNA-binding protein [Desulfovibrio fructosovorans JJ]
Length = 94
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 1/66 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRG 145
KK++VG L + EDD+R FS FG + SVN++T++ETG RGF F+E +D I G
Sbjct: 3 KKLYVGNLSFNSSEDDIRTQFSNFGEVISVNLITDRETGRLRGFGFVEMDDEGARAAIAG 62
Query: 146 FAFIEF 151
EF
Sbjct: 63 MDGQEF 68
>gi|383856328|ref|XP_003703661.1| PREDICTED: RNA-binding protein Musashi homolog Rbp6-like [Megachile
rotundata]
Length = 316
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 81 EANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+AN T KK+FVGG+ +D ++++ YF+QFG +E M+ +++T RGF F+ F + DV
Sbjct: 123 QANRT-KKIFVGGVSQDTSSEEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDV 181
Query: 140 VDKI 143
VD++
Sbjct: 182 VDRV 185
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q + LREYF FGT+ V ++ + T RGF FI F + VDK+
Sbjct: 41 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKV 97
>gi|242025582|ref|XP_002433203.1| RNA-binding protein squid, putative [Pediculus humanus corporis]
gi|212518744|gb|EEB20465.1| RNA-binding protein squid, putative [Pediculus humanus corporis]
Length = 272
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 47/78 (60%), Gaps = 1/78 (1%)
Query: 87 KKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRG 145
KK+FVGGL K E +L E FS+FGTIES+N+ + T RGF FI F+D +VVD+I
Sbjct: 21 KKLFVGGLPKLCGEKELNETFSKFGTIESINIKKDPITKVPRGFCFIVFSDPNVVDQILS 80
Query: 146 FAFIEFNDYDVVDKIVCK 163
I N V + V K
Sbjct: 81 SGDICVNGKKVDPRRVTK 98
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+F+GGL D E+ ++E+FSQ+G I V +++ KR + F+ F + D V ++
Sbjct: 104 KIFIGGLTTDFTEEKIKEHFSQYGKITDVQWPFDRQKNQKRAYCFLTFENRDTVTEL 160
>gi|2773158|gb|AAB96683.1| heterogeneous nuclear ribonucleoprotein D0B [Homo sapiens]
Length = 298
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 149 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 203
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 204 ELPMDNKTNKRRGFCFITFKEEEPVKKI 231
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 90 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 146
>gi|410292486|gb|JAA24843.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 355
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 157 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 211
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 212 ELPMDNKTNKRRGFCFITFKEEEPVKKI 239
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 154
>gi|403281337|ref|XP_003932146.1| PREDICTED: sulfotransferase family cytosolic 1B member 1 [Saimiri
boliviensis boliviensis]
Length = 266
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 43/63 (68%)
Query: 98 EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVV 157
E+ LR+YF Q+ IE + ++T++ +G KRGFAF+ F+D+D DKI + ND+D V
Sbjct: 2 EKHHLRDYFEQYEKIEMIEIMTDRGSGKKRGFAFVTFDDHDSQDKIVIQKYHTVNDHDCV 61
Query: 158 DKI 160
+++
Sbjct: 62 EEL 64
>gi|870747|dbj|BAA09524.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
Length = 215
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 66 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 120
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 121 ELPMDNKTNKRRGFCFITFKEEEPVKKI 148
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 7 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 63
>gi|395834191|ref|XP_003790095.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Otolemur garnettii]
Length = 306
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 157 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 211
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 212 ELPMDNKTNKRRGFCFITFKEEEPVKKI 239
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 154
>gi|119626278|gb|EAX05873.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_b [Homo sapiens]
Length = 152
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 3 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 57
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 58 ELPMDNKTNKRRGFCFITFKEEEPVKKI 85
>gi|119593351|gb|EAW72945.1| hCG1793591 [Homo sapiens]
Length = 158
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 48/84 (57%), Gaps = 5/84 (5%)
Query: 74 KLEIGKPEANATVKKMFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
K + + A+ TVKK+FV G+K+ EE LR+YF Q+G E + ++T++ G K+GFAF+
Sbjct: 59 KRRLSETSAHLTVKKIFVAGIKEYTEEHHLRDYFKQYGKTEVIEIMTDQGNGKKKGFAFV 118
Query: 133 EFNDYDVVDKIRGFAFIEFNDYDV 156
VDK + N ++
Sbjct: 119 SM----TVDKTVILKYHTVNGHNC 138
>gi|414591910|tpg|DAA42481.1| TPA: hypothetical protein ZEAMMB73_522608 [Zea mays]
Length = 449
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 59/121 (48%), Gaps = 5/121 (4%)
Query: 34 VEAGVLEVVTT-RPTINNKAMEEAQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVG 92
+A V E VTT + I+ + +E ++ D I + IG P T +K+FVG
Sbjct: 56 ADAAVAERVTTEKHMIDGRMVEAKKAVPRDDHSIV--TKSNASSIGSPGPGRT-RKIFVG 112
Query: 93 GLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEF 151
GL E D R YF QFG I V ++ + T RGF FI ++ D VDK +F E
Sbjct: 113 GLPSNVTEADFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHEL 172
Query: 152 N 152
N
Sbjct: 173 N 173
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGG+ + ED LREYF +FG + ++ ++ TG RGF F+ F D V +++
Sbjct: 8 KLFVGGISWETSEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADAAVAERV 64
>gi|334330945|ref|XP_001364005.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Monodelphis domestica]
Length = 376
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 178 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 232
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 233 ELPMDNKTNKRRGFCFITFKEEEPVKKI 260
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 119 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 175
>gi|156538565|ref|XP_001607438.1| PREDICTED: hypothetical protein LOC100123736 [Nasonia vitripennis]
Length = 395
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 45/64 (70%), Gaps = 2/64 (3%)
Query: 81 EANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+AN T KK+FVGG+ +D ++++ YF+QFG +E M+ +++T RGF F+ F + DV
Sbjct: 138 QANRT-KKIFVGGVSQDTSSEEVKAYFNQFGKVEETVMLMDQQTKRHRGFGFVTFENEDV 196
Query: 140 VDKI 143
VD++
Sbjct: 197 VDRV 200
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL Q + LREYF FGT+ V ++ + T RGF FI F + VDK+
Sbjct: 56 KLFVGGLSWQTSSEKLREYFGMFGTVTDVLIMKDPVTQRSRGFGFITFAEPGSVDKV 112
>gi|870743|dbj|BAA09522.1| heterogeneous nuclear ribonucleoprotein D (hnRNP D) [Homo sapiens]
Length = 267
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 69 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 123
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 124 ELPMDNKTNKRRGFCFITFKEEEPVKKI 151
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 10 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 66
>gi|332840634|ref|XP_003314028.1| PREDICTED: RNA-binding protein Musashi homolog 1, partial [Pan
troglodytes]
Length = 324
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 41 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 99
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 100 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 138
>gi|16041063|dbj|BAB69769.1| Musashi1 [Homo sapiens]
Length = 181
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 16 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 74
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 75 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 113
>gi|13124487|sp|Q9JJ54.1|HNRPD_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein D0;
Short=hnRNP D0; AltName: Full=AU-rich element
RNA-binding protein 1
gi|9588096|dbj|BAB03465.1| RNA binding protein p45AUF1 [Rattus norvegicus]
Length = 353
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 155 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 209
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 210 ELPMDNKTNKRRGFCFITFKEEEPVKKI 237
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 96 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 152
>gi|351702220|gb|EHB05139.1| RNA-binding protein Musashi-like protein 1, partial [Heterocephalus
glaber]
Length = 329
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 46 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 104
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 105 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 143
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 100 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDK 159
+ LREYF QFG ++ ++ + T RGF F+ F D VDK+ + E + + K
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 60
Query: 160 IV 161
+
Sbjct: 61 VA 62
>gi|127138710|ref|NP_077380.2| heterogeneous nuclear ribonucleoprotein D0 isoform a [Rattus
norvegicus]
gi|149046816|gb|EDL99590.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_a [Rattus
norvegicus]
Length = 353
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 155 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 209
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 210 ELPMDNKTNKRRGFCFITFKEEEPVKKI 237
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 96 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 152
>gi|9588100|dbj|BAB03467.1| RNA binding protein p40 AUF1 [Rattus norvegicus]
Length = 304
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 155 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 209
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 210 ELPMDNKTNKRRGFCFITFKEEEPVKKI 237
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 96 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 152
>gi|426374423|ref|XP_004054073.1| PREDICTED: RNA-binding protein Musashi homolog 1, partial [Gorilla
gorilla gorilla]
Length = 303
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 31 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 89
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 90 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 128
>gi|74001695|ref|XP_848950.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 2
[Canis lupus familiaris]
Length = 306
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 157 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 211
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 212 ELPMDNKTNKRRGFCFITFKEEEPVKKI 239
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 154
>gi|395505200|ref|XP_003756932.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B [Sarcophilus
harrisii]
Length = 278
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 86 VKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
VKK+FVGGL + ED +REYF FG IES+ + + +T +RGF FI F + D V KI
Sbjct: 82 VKKIFVGGLNPEATEDKIREYFGDFGEIESIELPMDPKTNKRRGFVFITFKEEDPVKKI 140
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 1/56 (1%)
Query: 89 MFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
MFVGGL D + DL++YF++FG + + + TG RGF FI F + VDK+
Sbjct: 1 MFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKESASVDKV 56
>gi|281340836|gb|EFB16420.1| hypothetical protein PANDA_020894 [Ailuropoda melanoleuca]
Length = 329
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 46 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 104
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 105 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 143
Score = 40.4 bits (93), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 100 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDK 159
+ LREYF QFG ++ ++ + T RGF F+ F D VDK+ + E + + K
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 60
Query: 160 IV 161
+
Sbjct: 61 VA 62
>gi|443897375|dbj|GAC74716.1| nuclear porin [Pseudozyma antarctica T-34]
Length = 694
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 40/76 (52%), Gaps = 11/76 (14%)
Query: 69 PPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKR 127
PPH PE KMFVGGL D ED LR YFSQFG + ++ + TG R
Sbjct: 258 PPHE------MPEEG----KMFVGGLNWDTTEDSLRRYFSQFGEVGHCTVMRDANTGRSR 307
Query: 128 GFAFIEFNDYDVVDKI 143
GFAF+ F D V+ +
Sbjct: 308 GFAFLNFVDPKAVNTV 323
Score = 48.9 bits (115), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 79 KPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P AN +K+FVGGL + R +F QFGT+ + ++ETG RGF F+ + D
Sbjct: 359 QPAAN---QKLFVGGLPASVTPESFRTFFEQFGTLSECTCMMDRETGRPRGFGFLTYADD 415
Query: 138 DVVDKIRGFAFIEFNDYDV 156
+++I I F+ +V
Sbjct: 416 ASLERILSANPIMFDGKEV 434
>gi|403263350|ref|XP_003924000.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Saimiri boliviensis boliviensis]
Length = 306
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 157 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 211
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 212 ELPMDNKTNKRRGFCFITFKEEEPVKKI 239
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 154
>gi|395834195|ref|XP_003790097.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Otolemur garnettii]
Length = 336
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 138 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 192
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 193 ELPMDNKTNKRRGFCFITFKEEEPVKKI 220
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 135
>gi|348584450|ref|XP_003477985.1| PREDICTED: RNA-binding protein Musashi homolog 1-like [Cavia
porcellus]
Length = 366
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 83 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 141
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 142 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 180
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 41/75 (54%), Gaps = 1/75 (1%)
Query: 88 KMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
KMF+GGL Q ++ LREYF QFG ++ ++ + T RGF F+ F D VDK+
Sbjct: 25 KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 84
Query: 147 AFIEFNDYDVVDKIV 161
+ E + + K+
Sbjct: 85 SRHELDSKTIDPKVA 99
>gi|149046822|gb|EDL99596.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_f [Rattus
norvegicus]
gi|149046823|gb|EDL99597.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_f [Rattus
norvegicus]
Length = 257
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 59 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 113
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 114 ELPMDNKTNKRRGFCFITFKEEEPVKKI 141
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 89 MFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
MF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 56
>gi|379056197|dbj|BAL68140.1| RNA-binding protein Musashi homolog 1 Long [Danio rerio]
Length = 349
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQ+ E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 79 AQTRHELDSKTIDP-KVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDD 137
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F + DVV+K+ F E N+
Sbjct: 138 AMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINN 176
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q ++ L++YF +FG ++ ++ + T RGF F+ F D VDK+
Sbjct: 21 KMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDKV 77
>gi|348508132|ref|XP_003441609.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Oreochromis niloticus]
Length = 363
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQ+ E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 81 AQNRHELDSKTIDP-KVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDD 139
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F + DVV+K+ F E N+
Sbjct: 140 AMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINN 178
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q ++ L+EYF +FG ++ ++ + T RGF F+ + + V+K+
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKV 79
>gi|410292490|gb|JAA24845.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 336
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 138 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 192
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 193 ELPMDNKTNKRRGFCFITFKEEEPVKKI 220
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 135
>gi|127139464|ref|NP_001076009.1| heterogeneous nuclear ribonucleoprotein D0 isoform c [Rattus
norvegicus]
gi|149046817|gb|EDL99591.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_b [Rattus
norvegicus]
Length = 304
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 155 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 209
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 210 ELPMDNKTNKRRGFCFITFKEEEPVKKI 237
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 96 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 152
>gi|269063712|emb|CAS85141.1| squid, variant B [Blattella germanica]
Length = 317
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + D +LR++F +G IES+N+ T+ TG RGFAFI F+ D +DK+
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKV 116
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL D +DD++ +F+Q+GTI V M +K ++GF FI F V
Sbjct: 133 KAKARHGKIFVGGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQV 192
Query: 140 VDKI 143
V ++
Sbjct: 193 VQEL 196
>gi|269063710|emb|CAS85140.1| squid, variant A [Blattella germanica]
Length = 341
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + D +LR++F +G IES+N+ T+ TG RGFAFI F+ D +DK+
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKV 116
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL D +DD++ +F+Q+GTI V M +K ++GF FI F V
Sbjct: 133 KAKARHGKIFVGGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQV 192
Query: 140 VDKI 143
V ++
Sbjct: 193 VQEL 196
>gi|133262|sp|P17132.1|HNRPC_RAT RecName: Full=Heterogeneous nuclear ribonucleoprotein C;
Short=hnRNP C; AltName: Full=hnRNP core protein C
gi|57810|emb|CAA34808.1| hnRNP C protein C-terminal fragment (158 AA) [Rattus sp.]
gi|226831|prf||1608114A hnRNP C protein
Length = 158
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 9 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 63
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 64 ELPMDNKTNKRRGFCFITFKEEEPVKKI 91
>gi|297823133|ref|XP_002879449.1| hypothetical protein ARALYDRAFT_482284 [Arabidopsis lyrata subsp.
lyrata]
gi|297325288|gb|EFH55708.1| hypothetical protein ARALYDRAFT_482284 [Arabidopsis lyrata subsp.
lyrata]
Length = 403
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+F+GG+ D +E+ LREYFS FG + V ++ K TG RGF F+ F+D V+D++
Sbjct: 7 KLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDRV 63
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 82 ANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVV 140
AN KK+FVGGL D+ R YF +G + ++ ++ T RGF F+ F+ D V
Sbjct: 105 ANVRTKKIFVGGLPPALTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSV 164
Query: 141 DKIRGFAFIEFNDYDV 156
D + F + N V
Sbjct: 165 DLVLHKTFHDLNGKQV 180
>gi|16041059|dbj|BAB69767.1| Musashi1 [Homo sapiens]
Length = 180
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 16 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 74
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 75 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 113
>gi|296478518|tpg|DAA20633.1| TPA: musashi 1 [Bos taurus]
Length = 342
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 79 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 137
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 138 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 176
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 61 EVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVT 119
E D PG + P++ KMF+GGL Q ++ LREYF QFG ++ ++
Sbjct: 2 ETDAPQPG--------LASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMR 53
Query: 120 NKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDKIV 161
+ T RGF F+ F D VDK+ + E + + K+
Sbjct: 54 DPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVA 95
>gi|194390332|dbj|BAG61935.1| unnamed protein product [Homo sapiens]
Length = 303
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 105 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 159
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 160 ELPMDNKTNKRRGFCFITFKEEEPVKKI 187
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 46 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 102
>gi|149046824|gb|EDL99598.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_g [Rattus
norvegicus]
Length = 208
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 59 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 113
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 114 ELPMDNKTNKRRGFCFITFKEEEPVKKI 141
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 89 MFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
MF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 1 MFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 56
>gi|16041061|dbj|BAB69768.1| Musashi1 [Homo sapiens]
Length = 181
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 16 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 74
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 75 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 113
>gi|392465146|dbj|BAM24697.1| musashi homolog 1 [Sus scrofa]
Length = 362
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 79 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 137
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 138 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 176
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 61 EVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVT 119
E D PG + P++ KMF+GGL Q ++ LREYF QFG ++ ++
Sbjct: 2 ETDAPQPG--------LASPDSPYDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMR 53
Query: 120 NKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDKIV 161
+ T RGF F+ F D VDK+ + E + + K+
Sbjct: 54 DPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVA 95
>gi|3747052|gb|AAC77437.1| estrogen response element binding protein [Saguinus oedipus]
Length = 358
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 157 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 211
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + V KI
Sbjct: 212 ELPMDNKTNKRRGFCFITFKGEEPVKKI 239
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 98 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 154
>gi|307193268|gb|EFN76159.1| RNA-binding protein squid [Harpegnathos saltator]
Length = 334
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + D +LRE+FS +G IES+N+ T+ TG RGFAFI F + +DKI
Sbjct: 74 RKLFVGGLSWETTDKELREHFSSYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKI 131
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL + +DD++ +FSQFGTI V M +K ++GF FI F V
Sbjct: 148 KAKARHGKIFVGGLSTELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQV 207
Query: 140 VDKI 143
V+++
Sbjct: 208 VNEL 211
>gi|449477049|ref|XP_002196403.2| PREDICTED: RNA-binding protein Musashi homolog 1 [Taeniopygia
guttata]
Length = 330
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 58 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 116
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 117 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 155
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 89 MFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
MF+GGL Q ++ LREYFSQFG ++ ++ + T RGF F+ F D VDK+
Sbjct: 1 MFIGGLSWQTTQEGLREYFSQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKV 56
>gi|14110417|ref|NP_112737.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Homo sapiens]
gi|332819428|ref|XP_003310368.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Pan
troglodytes]
gi|395735088|ref|XP_003776521.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 4
[Pongo abelii]
gi|402869393|ref|XP_003898747.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Papio anubis]
gi|2815614|gb|AAC23476.1| heterogeneous nuclear ribonucleoprotein D [Homo sapiens]
gi|119626279|gb|EAX05874.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_c [Homo sapiens]
gi|119626283|gb|EAX05878.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_c [Homo sapiens]
gi|119626288|gb|EAX05883.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_c [Homo sapiens]
gi|158258851|dbj|BAF85396.1| unnamed protein product [Homo sapiens]
gi|380783615|gb|AFE63683.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Macaca
mulatta]
gi|383417961|gb|AFH32194.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Macaca
mulatta]
gi|384940048|gb|AFI33629.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Macaca
mulatta]
Length = 336
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 138 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 192
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 193 ELPMDNKTNKRRGFCFITFKEEEPVKKI 220
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 135
>gi|410351153|gb|JAA42180.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa) [Pan troglodytes]
Length = 337
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 139 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 193
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 194 ELPMDNKTNKRRGFCFITFKEEEPVKKI 221
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 80 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 136
>gi|269063716|emb|CAS85143.1| squid, variant D [Blattella germanica]
Length = 294
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + D +LR++F +G IES+N+ T+ TG RGFAFI F+ D +DK+
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKV 116
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL D +DD++ +F+Q+GTI V M +K ++GF FI F V
Sbjct: 133 KAKARHGKIFVGGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQV 192
Query: 140 VDKI 143
V ++
Sbjct: 193 VQEL 196
>gi|269063714|emb|CAS85142.1| squid, variant C [Blattella germanica]
Length = 318
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + D +LR++F +G IES+N+ T+ TG RGFAFI F+ D +DK+
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKV 116
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL D +DD++ +F+Q+GTI V M +K ++GF FI F V
Sbjct: 133 KAKARHGKIFVGGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQV 192
Query: 140 VDKI 143
V ++
Sbjct: 193 VQEL 196
>gi|58332792|ref|NP_001011470.1| musashi RNA-binding protein 1 [Xenopus (Silurana) tropicalis]
gi|147899394|ref|NP_001081302.1| nrp-1B [Xenopus laevis]
gi|214632|gb|AAA49920.1| pot. RNA-binding protein (nrp-1B); putative [Xenopus laevis]
gi|52221204|gb|AAH82667.1| LOC397764 protein [Xenopus laevis]
gi|56970642|gb|AAH88603.1| musashi homolog 1 [Xenopus (Silurana) tropicalis]
Length = 340
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 79 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 137
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 138 AMLMFDKTTNRHRGFGFVTFEGEDIVEKVCDIHFHEINN 176
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/68 (38%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 77 IGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
+ P++ KMF+GGL Q ++ LREYFS FG ++ ++ + T RGF F+ F
Sbjct: 10 LSPPDSAHDPCKMFIGGLSWQTTQEGLREYFSHFGDVKECLVMRDPLTKRSRGFGFVTFM 69
Query: 136 DYDVVDKI 143
D VDK+
Sbjct: 70 DQAGVDKV 77
>gi|116256516|ref|NP_001070735.1| heterogeneous nuclear ribonucleoprotein D0 isoform d [Mus musculus]
gi|148688365|gb|EDL20312.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_b [Mus
musculus]
Length = 287
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 138 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 192
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 193 ELPMDNKTNKRRGFCFITFKEEEPVKKI 220
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 135
>gi|61806598|ref|NP_001013534.1| RNA-binding protein Musashi homolog 1 [Danio rerio]
gi|60688517|gb|AAH90916.1| Musashi homolog 1 (Drosophila) [Danio rerio]
gi|182888902|gb|AAI64361.1| Msi1 protein [Danio rerio]
gi|379056199|dbj|BAL68141.1| RNA-binding protein Musashi homolog 1 Short [Danio rerio]
Length = 330
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQ+ E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 79 AQTRHELDSKTIDP-KVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDD 137
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F + DVV+K+ F E N+
Sbjct: 138 AMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINN 176
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q ++ L++YF +FG ++ ++ + T RGF F+ F D VDK+
Sbjct: 21 KMFIGGLSWQTTQEGLKDYFCKFGEVKESMVMRDPVTKRSRGFGFVTFVDQAGVDKV 77
>gi|395833926|ref|XP_003789968.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Otolemur
garnettii]
Length = 341
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 58 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 116
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 117 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 155
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 89 MFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFA 147
MF+GGL Q ++ LREYF QFG ++ ++ + T RGF F+ F D VDK+ +
Sbjct: 1 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 60
Query: 148 FIEFNDYDVVDKIV 161
E + + K+
Sbjct: 61 RHELDSKTIDPKVA 74
>gi|116256518|ref|NP_001070734.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Mus musculus]
gi|148688364|gb|EDL20311.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_a [Mus
musculus]
Length = 336
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 138 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 192
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 193 ELPMDNKTNKRRGFCFITFKEEEPVKKI 220
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 135
>gi|149063558|gb|EDM13881.1| rCG21724, isoform CRA_b [Rattus norvegicus]
Length = 262
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D++ YF QFG ++
Sbjct: 28 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDD 86
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 87 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 125
>gi|51477708|ref|NP_001003810.1| heterogeneous nuclear ribonucleoprotein D0 isoform d [Homo sapiens]
gi|332819424|ref|XP_003310366.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Pan
troglodytes]
gi|395735086|ref|XP_003776520.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Pongo abelii]
gi|119626285|gb|EAX05880.1| heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA
binding protein 1, 37kDa), isoform CRA_g [Homo sapiens]
Length = 287
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 138 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 192
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 193 ELPMDNKTNKRRGFCFITFKEEEPVKKI 220
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 135
>gi|269063720|emb|CAS85145.1| squid, variant F [Blattella germanica]
Length = 297
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + D +LR++F +G IES+N+ T+ TG RGFAFI F+ D +DK+
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKV 116
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL D +DD++ +F+Q+GTI V M +K ++GF FI F V
Sbjct: 133 KAKARHGKIFVGGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQV 192
Query: 140 VDKI 143
V ++
Sbjct: 193 VQEL 196
>gi|269063718|emb|CAS85144.1| squid, variant E [Blattella germanica]
Length = 321
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + D +LR++F +G IES+N+ T+ TG RGFAFI F+ D +DK+
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKV 116
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL D +DD++ +F+Q+GTI V M +K ++GF FI F V
Sbjct: 133 KAKARHGKIFVGGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQV 192
Query: 140 VDKI 143
V ++
Sbjct: 193 VQEL 196
>gi|15226106|ref|NP_180899.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|2459445|gb|AAB80680.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|22530920|gb|AAM96964.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|23198416|gb|AAN15735.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|330253737|gb|AEC08831.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 404
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+F+GG+ D +E+ LREYFS FG + V ++ K TG RGF F+ F+D V+D++
Sbjct: 7 KLFIGGISWDTDENLLREYFSNFGEVLQVTVMREKATGRPRGFGFVAFSDPAVIDRV 63
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
Query: 82 ANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVV 140
AN KK+FVGGL D+ R YF +G + ++ ++ T RGF F+ F+ D V
Sbjct: 105 ANVRTKKIFVGGLPPALTSDEFRAYFETYGPVSDAVIMIDQTTQRPRGFGFVSFDSEDSV 164
Query: 141 DKIRGFAFIEFNDYDV 156
D + F + N V
Sbjct: 165 DLVLHKTFHDLNGKQV 180
>gi|344249205|gb|EGW05309.1| RNA-binding protein Musashi-like 1 [Cricetulus griseus]
Length = 338
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 46 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 104
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 105 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 143
Score = 40.4 bits (93), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 100 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDK 159
+ LREYF QFG ++ ++ + T RGF F+ F D VDK+ + E + + K
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 60
Query: 160 IV 161
+
Sbjct: 61 VA 62
>gi|323346676|gb|EGA80960.1| Hrp1p [Saccharomyces cerevisiae Lalvin QA23]
Length = 576
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 88 KMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
K+FVGG+ D + E+FSQ+GTI ++ +K+TG RGF F+ ++ D VD++
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303
Query: 147 AFIEFNDYDV 156
FI+F D +
Sbjct: 304 KFIDFKDRKI 313
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
K E K + + KMF+GGL D ED+LREYF ++GT+ + ++ + TG RGF F+
Sbjct: 146 KEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFL 205
Query: 133 EFNDYDVVDKI 143
F VD++
Sbjct: 206 SFEKPSSVDEV 216
>gi|148687912|gb|EDL19859.1| Musashi homolog 1(Drosophila) [Mus musculus]
Length = 280
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D++ YF QFG ++
Sbjct: 46 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDD 104
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 105 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 143
Score = 40.0 bits (92), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 100 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDK 159
+ LREYF QFG ++ ++ + T RGF F+ F D VDK+ + E + + K
Sbjct: 1 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPK 60
Query: 160 IV 161
+
Sbjct: 61 VA 62
>gi|403263354|ref|XP_003924002.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 3
[Saimiri boliviensis boliviensis]
Length = 336
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 138 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 192
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 193 ELPMDNKTNKRRGFCFITFKEEEPVKKI 220
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 135
>gi|269063722|emb|CAS85146.1| squid, variant G [Blattella germanica]
Length = 274
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + D +LR++F +G IES+N+ T+ TG RGFAFI F+ D +DK+
Sbjct: 59 RKLFVGGLSWETTDKELRDHFHTYGEIESINVKTDPNTGRSRGFAFIVFSQADSIDKV 116
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL D +DD++ +F+Q+GTI V M +K ++GF FI F V
Sbjct: 133 KAKARHGKIFVGGLVPDLSDDDIKSFFAQYGTIVEVEMPFDKTKNQRKGFCFITFESEQV 192
Query: 140 VDKI 143
V ++
Sbjct: 193 VQEL 196
>gi|74001707|ref|XP_535627.2| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Canis lupus familiaris]
Length = 336
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 138 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 192
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 193 ELPMDNKTNKRRGFCFITFKEEEPVKKI 220
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 135
>gi|395513903|ref|XP_003761161.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Sarcophilus
harrisii]
Length = 368
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 25 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 83
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 84 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 122
>gi|327282604|ref|XP_003226032.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Anolis carolinensis]
Length = 325
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 80 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 138
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 139 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 177
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 80 PEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P++ KMF+GGL Q ++ LREYF QFG ++ ++ + T RGF F+ F D
Sbjct: 14 PDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFVDQA 73
Query: 139 VVDKI 143
VDK+
Sbjct: 74 GVDKV 78
>gi|322792842|gb|EFZ16675.1| hypothetical protein SINV_08972 [Solenopsis invicta]
Length = 335
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL + D +LRE+FS +G IES+N+ T+ TG RGFAFI F + +DKI
Sbjct: 56 RKLFVGGLSWETTDKELREHFSAYGDIESINVKTDPNTGRSRGFAFIVFAKAESLDKI 113
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
+A A K+FVGGL + +DD++ +FSQFGTI V M +K ++GF FI F V
Sbjct: 130 KAKARHGKIFVGGLSTELSDDDIKNFFSQFGTIVEVEMPFDKTKNQRKGFCFITFESEQV 189
Query: 140 VDKI 143
V+++
Sbjct: 190 VNEL 193
>gi|4505255|ref|NP_002433.1| RNA-binding protein Musashi homolog 1 [Homo sapiens]
gi|125630689|ref|NP_001074996.1| RNA-binding protein Musashi homolog 1 [Bos taurus]
gi|296213096|ref|XP_002753122.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Callithrix
jacchus]
gi|51316193|sp|O43347.1|MSI1H_HUMAN RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|2769698|gb|AAB95636.1| similar to murine RNA-binding protein; 99% similar to D49654
(PID:g1434857) [Homo sapiens]
gi|3786320|dbj|BAA33962.1| Musashi [Homo sapiens]
gi|119618592|gb|EAW98186.1| musashi homolog 1 (Drosophila), isoform CRA_b [Homo sapiens]
gi|124358513|dbj|BAF45938.1| RNA-binding protein Musashi-1 [Bos taurus]
gi|147897997|gb|AAI40381.1| Musashi homolog 1 (Drosophila) [synthetic construct]
gi|148921740|gb|AAI46464.1| Musashi homolog 1 (Drosophila) [synthetic construct]
gi|208966796|dbj|BAG73412.1| musashi homolog 1 [synthetic construct]
Length = 362
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 79 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 137
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 138 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 176
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 61 EVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVT 119
E D PG + P++ KMF+GGL Q ++ LREYF QFG ++ ++
Sbjct: 2 ETDAPQPG--------LASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMR 53
Query: 120 NKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDKIV 161
+ T RGF F+ F D VDK+ + E + + K+
Sbjct: 54 DPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVA 95
>gi|345322713|ref|XP_001506312.2| PREDICTED: RNA-binding protein Musashi homolog 2-like
[Ornithorhynchus anatinus]
Length = 251
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQ E+D + P + +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 76 AQPHHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVED 134
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F + DVV+K+ F E N+
Sbjct: 135 AMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINN 173
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 84 ATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
++ KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK
Sbjct: 14 SSSSKMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDK 73
Query: 143 I 143
+
Sbjct: 74 V 74
>gi|308465164|ref|XP_003094843.1| CRE-HRP-1 protein [Caenorhabditis remanei]
gi|308246407|gb|EFO90359.1| CRE-HRP-1 protein [Caenorhabditis remanei]
Length = 344
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 70 PHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRG 128
P DK + E+N + K+++V G++ D ED L +YFS++G + ++ +K T RG
Sbjct: 100 PRDDK---NRSESNVSTKRLYVSGVREDHNEDMLTDYFSKYGNVTKSEIILDKATQKPRG 156
Query: 129 FAFIEFNDYDVVDK 142
F F+ F+D+D VD+
Sbjct: 157 FGFVTFDDHDSVDQ 170
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 40/72 (55%), Gaps = 4/72 (5%)
Query: 74 KLEIGKPEANA---TVKKMFVGGLKDQEEDDL-REYFSQFGTIESVNMVTNKETGAKRGF 129
K E G +AN ++K+FVGGL D+L RE++SQFG I + ++ + T RGF
Sbjct: 7 KTENGGGDANLEPENLRKIFVGGLTSNTTDELMREFYSQFGEITDIIVMRDPTTKRSRGF 66
Query: 130 AFIEFNDYDVVD 141
F+ F VD
Sbjct: 67 GFVTFTAKTEVD 78
>gi|9588098|dbj|BAB03466.1| RNA binding protein p42 AUF1 [Rattus norvegicus]
Length = 334
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 136 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 190
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 191 ELPMDNKTNKRRGFCFITFKEEEPVKKI 218
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 77 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 133
>gi|431914268|gb|ELK15526.1| RNA-binding protein Musashi like protein 1 [Pteropus alecto]
Length = 281
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 28 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 86
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 87 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 125
>gi|9588102|dbj|BAB03468.1| RNA binding protein p37 AUF1 [Rattus norvegicus]
Length = 285
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 136 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 190
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 191 ELPMDNKTNKRRGFCFITFKEEEPVKKI 218
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 77 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 133
>gi|119618593|gb|EAW98187.1| musashi homolog 1 (Drosophila), isoform CRA_c [Homo sapiens]
Length = 343
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 79 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 137
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 138 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 176
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 61 EVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVT 119
E D PG + P++ KMF+GGL Q ++ LREYF QFG ++ ++
Sbjct: 2 ETDAPQPG--------LASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMR 53
Query: 120 NKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDKIV 161
+ T RGF F+ F D VDK+ + E + + K+
Sbjct: 54 DPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVA 95
>gi|127139089|ref|NP_001076008.1| heterogeneous nuclear ribonucleoprotein D0 isoform b [Rattus
norvegicus]
gi|149046818|gb|EDL99592.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_c [Rattus
norvegicus]
gi|149046819|gb|EDL99593.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_c [Rattus
norvegicus]
Length = 334
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 136 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 190
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 191 ELPMDNKTNKRRGFCFITFKEEEPVKKI 218
Score = 49.7 bits (117), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 77 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 133
>gi|224049399|ref|XP_002190694.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 1
[Taeniopygia guttata]
gi|449499942|ref|XP_004175399.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 [Taeniopygia
guttata]
Length = 318
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 120 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 174
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 175 ELPMDNKTNKRRGFCFITFKEEEPVKKI 202
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 61 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 117
>gi|74001711|ref|XP_857875.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0 isoform 9
[Canis lupus familiaris]
Length = 287
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 138 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 192
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 193 ELPMDNKTNKRRGFCFITFKEEEPVKKI 220
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 79 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 135
>gi|449479911|ref|XP_004177058.1| PREDICTED: RNA-binding protein Musashi homolog 2 isoform 2
[Taeniopygia guttata]
Length = 251
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQ E+D + P + +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 76 AQPHHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVED 134
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F + DVV+K+ F E N+
Sbjct: 135 AMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINN 173
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 74
>gi|327282602|ref|XP_003226031.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Anolis carolinensis]
Length = 352
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 80 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 138
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 139 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 177
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 1/83 (1%)
Query: 80 PEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P++ KMF+GGL Q ++ LREYF QFG ++ ++ + T RGF F+ F D
Sbjct: 14 PDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFVDQA 73
Query: 139 VVDKIRGFAFIEFNDYDVVDKIV 161
VDK+ + E + + K+
Sbjct: 74 GVDKVLAQSRHELDSKTIDPKVA 96
>gi|341894622|gb|EGT50557.1| CBN-HRP-1 protein [Caenorhabditis brenneri]
Length = 343
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 46/74 (62%), Gaps = 4/74 (5%)
Query: 70 PHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRG 128
P DK + E+N + K+++V G++ D ED L EYFS++G + ++ +K T RG
Sbjct: 100 PRDDK---NRSESNVSTKRLYVSGVREDHTEDMLTEYFSKYGNVVKSEIILDKATQKPRG 156
Query: 129 FAFIEFNDYDVVDK 142
F F+ F+D+D VD+
Sbjct: 157 FGFVTFDDHDSVDQ 170
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 86 VKKMFVGGLKDQEEDDL-REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
++K+FVGGL D+L RE++SQFG I + ++ + T RGF F+ F VD
Sbjct: 22 LRKIFVGGLTSNTTDELMREFYSQFGEITDIIVMRDPTTKRSRGFGFVTFTGKTEVD 78
>gi|119618591|gb|EAW98185.1| musashi homolog 1 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 351
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 79 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 137
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 138 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 176
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 61 EVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVT 119
E D PG + P++ KMF+GGL Q ++ LREYF QFG ++ ++
Sbjct: 2 ETDAPQPG--------LASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMR 53
Query: 120 NKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDKIV 161
+ T RGF F+ F D VDK+ + E + + K+
Sbjct: 54 DPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVA 95
>gi|323307358|gb|EGA60637.1| Hrp1p [Saccharomyces cerevisiae FostersO]
Length = 534
Score = 57.4 bits (137), Expect = 2e-06, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 74 KLEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
K I + E + T K+FVGG+ D + E+FSQ+GTI ++ +K+TG RGF F+
Sbjct: 231 KRAIPRDEQDKT-GKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFV 289
Query: 133 EFNDYDVVDKIRGFAFIEFNDYDV 156
++ D VD++ FI+F D +
Sbjct: 290 TYDSADAVDRVCQNKFIDFKDRKI 313
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
K E K + + KMF+GGL D ED+LREYF ++GT+ + ++ + TG RGF F+
Sbjct: 146 KEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFL 205
Query: 133 EFNDYDVVDKI 143
F VD++
Sbjct: 206 SFEKPSSVDEV 216
>gi|444721795|gb|ELW62507.1| ATP-binding cassette sub-family A member 3 [Tupaia chinensis]
Length = 4340
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 36/48 (75%)
Query: 96 DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
D +E LR YF Q+G E + ++T++++G K+GFAF+ F+D+D VDKI
Sbjct: 3269 DTKEHHLRNYFEQYGKTEVIEIMTDRDSGKKKGFAFVTFDDHDSVDKI 3316
>gi|348508134|ref|XP_003441610.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 3
[Oreochromis niloticus]
Length = 351
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQ+ E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 81 AQNRHELDSKTIDP-KVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDD 139
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F + DVV+K+ F E N+
Sbjct: 140 AMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINN 178
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q ++ L+EYF +FG ++ ++ + T RGF F+ + + V+K+
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKV 79
>gi|259149364|emb|CAY86168.1| Hrp1p [Saccharomyces cerevisiae EC1118]
Length = 534
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 88 KMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
K+FVGG+ D + E+FSQ+GTI ++ +K+TG RGF F+ ++ D VD++
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303
Query: 147 AFIEFNDYDV 156
FI+F D +
Sbjct: 304 KFIDFKDRKI 313
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
K E K + + KMF+GGL D ED+LREYF ++GT+ + ++ + TG RGF F+
Sbjct: 146 KEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFL 205
Query: 133 EFNDYDVVDKI 143
F VD++
Sbjct: 206 SFEKPSSVDEV 216
>gi|89257474|gb|ABD64965.1| hypothetical protein 25.t00002 [Brassica oleracea]
Length = 445
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 9/115 (7%)
Query: 40 EVVTTRPTINNKAMEEAQSEEEVDMEIPGPPHMDKLEI-GKPEANATVKKMFVGGLKDQ- 97
VV R I+ K +E ++ +P H + G A KK+FVGGL
Sbjct: 62 RVVLLRHVIDGKLVEAKKA-------VPRDDHKSNSSLQGSSPGPANSKKIFVGGLASSV 114
Query: 98 EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFN 152
E + ++YF+QFGTI V ++ ++ T RGF FI + D VD++ F E N
Sbjct: 115 TEAEFKKYFAQFGTITDVVVMYDQRTQRPRGFGFISYESEDAVDRVLRRTFHELN 169
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+F+GG+ + ED LR+YF FG + ++ ++ TG RGF F+ F D +V +++
Sbjct: 7 KLFIGGISWETTEDRLRDYFQSFGEVLEAVIMKDRSTGRARGFGFLVFADPNVAERV 63
>gi|6324449|ref|NP_014518.1| Hrp1p [Saccharomyces cerevisiae S288c]
gi|2500574|sp|Q99383.1|HRP1_YEAST RecName: Full=Nuclear polyadenylated RNA-binding protein 4;
AltName: Full=Cleavage factor IB; Short=CFIB
gi|1016290|gb|AAA79097.1| nuclear polyadenylated RNA-binding protein [Saccharomyces
cerevisiae]
gi|1420003|emb|CAA99142.1| HRP1 [Saccharomyces cerevisiae]
gi|1550721|emb|CAA64546.1| RNA binding protein [Saccharomyces cerevisiae]
gi|1657691|gb|AAB18142.1| Hrp1p [Saccharomyces cerevisiae]
gi|285814768|tpg|DAA10661.1| TPA: Hrp1p [Saccharomyces cerevisiae S288c]
gi|349581049|dbj|GAA26207.1| K7_Hrp1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296592|gb|EIW07694.1| Hrp1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 534
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 88 KMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
K+FVGG+ D + E+FSQ+GTI ++ +K+TG RGF F+ ++ D VD++
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303
Query: 147 AFIEFNDYDV 156
FI+F D +
Sbjct: 304 KFIDFKDRKI 313
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
K E K + + KMF+GGL D ED+LREYF ++GT+ + ++ + TG RGF F+
Sbjct: 146 KEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFL 205
Query: 133 EFNDYDVVDKI 143
F VD++
Sbjct: 206 SFEKPSSVDEV 216
>gi|365763141|gb|EHN04671.1| Hrp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 534
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 88 KMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
K+FVGG+ D + E+FSQ+GTI ++ +K+TG RGF F+ ++ D VD++
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303
Query: 147 AFIEFNDYDV 156
FI+F D +
Sbjct: 304 KFIDFKDRKI 313
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
K E K + + KMF+GGL D ED+LREYF ++GT+ + ++ + TG RGF F+
Sbjct: 146 KEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFL 205
Query: 133 EFNDYDVVDKI 143
F VD++
Sbjct: 206 SFEKPSSVDEV 216
>gi|365758528|gb|EHN00365.1| Hrp1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 539
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 88 KMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
K+FVGG+ D + E+FSQ+GTI ++ +K+TG RGF F+ ++ D VD++
Sbjct: 247 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 306
Query: 147 AFIEFNDYDV 156
FI+F D +
Sbjct: 307 KFIDFKDRKI 316
Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
K E K + + KMF+GGL D ED+LREYF ++GT+ + ++ + TG RGF F+
Sbjct: 149 KEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFL 208
Query: 133 EFNDYDVVDKI 143
F VD++
Sbjct: 209 SFEKPSSVDEV 219
>gi|323303112|gb|EGA56914.1| Hrp1p [Saccharomyces cerevisiae FostersB]
Length = 550
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 88 KMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
K+FVGG+ D + E+FSQ+GTI ++ +K+TG RGF F+ ++ D VD++
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303
Query: 147 AFIEFNDYDV 156
FI+F D +
Sbjct: 304 KFIDFKDRKI 313
Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
K E K + + KMF+GGL D ED+LREYF ++GT+ + ++ + TG RGF F+
Sbjct: 146 KEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFL 205
Query: 133 EFNDYDVVDKI 143
F VD++
Sbjct: 206 SFEKPSSVDEV 216
>gi|151945512|gb|EDN63753.1| cleavage and polyadenylation factor CF I component involved in
pre-mRNA 3'-end processing [Saccharomyces cerevisiae
YJM789]
gi|190407229|gb|EDV10496.1| nuclear polyadenylated RNA-binding protein 4 [Saccharomyces
cerevisiae RM11-1a]
gi|207341455|gb|EDZ69508.1| YOL123Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256270127|gb|EEU05357.1| Hrp1p [Saccharomyces cerevisiae JAY291]
Length = 534
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 88 KMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
K+FVGG+ D + E+FSQ+GTI ++ +K+TG RGF F+ ++ D VD++
Sbjct: 244 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 303
Query: 147 AFIEFNDYDV 156
FI+F D +
Sbjct: 304 KFIDFKDRKI 313
Score = 55.8 bits (133), Expect = 7e-06, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 74 KLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
K E K + + KMF+GGL D ED+LREYF ++GT+ + ++ + TG RGF F+
Sbjct: 146 KEERSKADLSKESCKMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFL 205
Query: 133 EFNDYDVVDKI 143
F VD++
Sbjct: 206 SFEKPSSVDEV 216
>gi|127138754|ref|NP_001076010.1| heterogeneous nuclear ribonucleoprotein D0 isoform d [Rattus
norvegicus]
gi|149046820|gb|EDL99594.1| heterogeneous nuclear ribonucleoprotein D, isoform CRA_d [Rattus
norvegicus]
Length = 285
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 136 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 190
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V KI
Sbjct: 191 ELPMDNKTNKRRGFCFITFKEEEPVKKI 218
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 77 KMFIGGLSWDTTKKDLKDYFSKFGDVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 133
>gi|348508130|ref|XP_003441608.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Oreochromis niloticus]
Length = 332
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 55/99 (55%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQ+ E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 81 AQNRHELDSKTIDP-KVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDD 139
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F + DVV+K+ F E N+
Sbjct: 140 AMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINN 178
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q ++ L+EYF +FG ++ ++ + T RGF F+ + + V+K+
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKV 79
>gi|189441636|gb|AAI67421.1| LOC734098 protein [Xenopus (Silurana) tropicalis]
Length = 254
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 54 EEAQSEEEVDMEIPGPPHM---DKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQF 109
EA E + ++PG + D++ K E +A KMFVGGL D + DL++YFS+F
Sbjct: 18 HEACDAEAAESKVPGGQNGAEGDQINASKGEEDAG--KMFVGGLSWDTSKKDLKDYFSKF 75
Query: 110 GTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
G + + + TG RGF FI F D VDK+
Sbjct: 76 GEVSDCTIKMDPNTGRSRGFGFILFKDAASVDKV 109
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 86 VKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+KK+FVGGL + ED +REYF FG IE++ + + +T +RGF FI F + + V KI
Sbjct: 135 IKKIFVGGLNPEAGEDKIREYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKI 193
>gi|26350925|dbj|BAC39099.1| unnamed protein product [Mus musculus]
Length = 301
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D++ YF QFG ++
Sbjct: 58 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDD 116
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 117 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 155
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/74 (35%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Query: 89 MFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFA 147
MF+GGL Q ++ LREYF QFG ++ ++ + T RGF F+ F D VDK+ +
Sbjct: 1 MFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQS 60
Query: 148 FIEFNDYDVVDKIV 161
E + + K+
Sbjct: 61 RHELDSKTIDPKVA 74
>gi|392351488|ref|XP_340877.5| PREDICTED: RNA-binding protein Musashi homolog 2-like [Rattus
norvegicus]
Length = 463
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 219 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 278
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 279 DVVEKVCEIHFHEINN 294
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 33/66 (50%)
Query: 96 DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYD 155
D D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G E +
Sbjct: 148 DVPADSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKT 207
Query: 156 VVDKIV 161
+ K+
Sbjct: 208 IDPKVA 213
>gi|318086976|gb|ADV40080.1| putative RNA-binding protein musashi [Latrodectus hesperus]
Length = 298
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KK+F+GG+ ++ + DL+EYFS+FG + VN+ T+ +G RGFAF+ F D VD +
Sbjct: 54 KKLFIGGISRETNQKDLKEYFSKFGEVTEVNIKTDPTSGRSRGFAFVAFASRDSVDSV 111
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 58 SEEEVDMEIPGPPHMDK---LEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIE 113
S + VD + PH K +E + + +KK+FVGG++ D E D+R YF +G +E
Sbjct: 104 SRDSVDSVLHNGPHNIKGKQIEAKRAKVRPGIKKIFVGGIESDMTEADIRNYFEHYGKVE 163
Query: 114 SVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+V + +K +R F F+ F D VD++
Sbjct: 164 AVELPFDKVKNQRRQFCFVTFEDEMTVDQV 193
>gi|432952700|ref|XP_004085203.1| PREDICTED: RNA-binding protein Musashi homolog 1-like, partial
[Oryzias latipes]
Length = 260
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG ++ ++ +K T RGF F+ F +
Sbjct: 12 QPKLVTRTKKIFVGGLSVNTTIEDVKQYFDQFGKVDDAMLMFDKTTNRHRGFGFVTFENE 71
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 72 DVVEKVCEIHFHEINN 87
>gi|313227905|emb|CBY23054.1| unnamed protein product [Oikopleura dioica]
Length = 161
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 76 EIGKPEANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
+I K ++ +KMFVGGL + +L EYF QFG +E V++ + TGA RGF FI F
Sbjct: 74 QILKKHMGSSSRKMFVGGLAHETTTANLWEYFEQFGEMEDVDIKCDVYTGASRGFGFILF 133
Query: 135 NDYDVVDKIR 144
D VDK++
Sbjct: 134 KDAASVDKVK 143
>gi|25121993|ref|NP_733839.1| RNA-binding protein Musashi homolog 2 isoform b [Homo sapiens]
gi|332848594|ref|XP_003315679.1| PREDICTED: uncharacterized protein LOC748578 [Pan troglodytes]
gi|426347417|ref|XP_004041349.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Gorilla gorilla
gorilla]
gi|21752839|dbj|BAC04244.1| unnamed protein product [Homo sapiens]
gi|119614916|gb|EAW94510.1| musashi homolog 2 (Drosophila), isoform CRA_e [Homo sapiens]
Length = 251
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 78 GKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 136
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 97 AQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFEN 156
Query: 137 YDVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 157 EDVVEKVCEIHFHEINN 173
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRG 145
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLG 76
>gi|350592544|ref|XP_003359176.2| PREDICTED: RNA-binding protein Musashi homolog 1-like, partial [Sus
scrofa]
Length = 411
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 128 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 186
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 187 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 225
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 102 LREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDKIV 161
LREYF QFG + ++ + T RGF F+ F D VDK+ + E + + K+
Sbjct: 85 LREYFGQFGEEKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVA 144
>gi|426338236|ref|XP_004033092.1| PREDICTED: putative heterogeneous nuclear ribonucleoprotein A1-like
3-like [Gorilla gorilla gorilla]
Length = 256
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 39/52 (75%)
Query: 92 GGLKDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
GG +++ LR+YF Q+G IE + ++T++ +G KRGFAF+ F+D+D +DKI
Sbjct: 47 GGTGIRQKHHLRDYFEQYGKIEVIEIMTDRGSGKKRGFAFVTFDDHDSMDKI 98
>gi|317419099|emb|CBN81137.1| RNA-binding protein Musashi homolog 1 [Dicentrarchus labrax]
Length = 362
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQ+ E+D + P + +P+ KK+FVGGL + +D++ YF QFG ++
Sbjct: 81 AQNRHELDSKTIDP-KVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKHYFDQFGKVDD 139
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F + DVV+K+ F E N+
Sbjct: 140 AMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINN 178
Score = 42.4 bits (98), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q ++ L+EYF +FG ++ ++ + T RGF F+ + + V+K+
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYAEQAGVEKV 79
>gi|302850790|ref|XP_002956921.1| hypothetical protein VOLCADRAFT_107445 [Volvox carteri f.
nagariensis]
gi|300257802|gb|EFJ42046.1| hypothetical protein VOLCADRAFT_107445 [Volvox carteri f.
nagariensis]
Length = 444
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 59/107 (55%), Gaps = 14/107 (13%)
Query: 40 EVVTTRPTINNKAME--EAQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLKDQ 97
+VV T+ TI+ + +E +A +EE E K + P+ KK+FVGGL
Sbjct: 63 KVVATKHTIDRREVEAKKAVPKEETPEE--------KQQGSAPQ---RTKKIFVGGLAPS 111
Query: 98 -EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+E LR++FSQFGT+E ++ + E RGF F+ F + D VD++
Sbjct: 112 VDEAQLRQHFSQFGTVEDAVVMYDHENKRPRGFGFVTFAEEDAVDRV 158
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+F+GGL + + LR YF FG++ + N+ G RGF F+ F +V DK+
Sbjct: 8 KVFIGGLSWETTGEKLRAYFENFGSVREAFVSYNRNNGRPRGFGFVVFESPEVADKV 64
>gi|550458|gb|AAA68014.1| ribonucleoprotein [Gallus gallus]
gi|1095499|prf||2109229A RNA-binding protein
Length = 285
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 86 VKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
VKK+FVGGL + E+ +REYF +FG IE++ + + +T +RGF FI F + D V K+
Sbjct: 156 VKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFISFKEEDPVKKV 214
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMFVGGL D + DL++YF++FG + + + TG RGF F F + V+K+
Sbjct: 74 KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGFRLFKEPGSVEKV 130
>gi|345489601|ref|XP_001600266.2| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
1 [Nasonia vitripennis]
Length = 376
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 60 EEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMV 118
++D P + + KP+ + K+F+GGL E DLR +F +FG + V ++
Sbjct: 76 HQLDGRTIDPKPCNPRTLQKPKRSGGFPKVFLGGLPSNVTETDLRSFFQRFGKVMEVVIM 135
Query: 119 TNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV 156
++E RGF F+ F D D VD+ G F+ N V
Sbjct: 136 YDQEKKKSRGFGFLSFEDEDAVDRCVGEHFVNLNGKQV 173
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 136
K+FVGGL + +++L+ YFS++G + ++ N E+G RGF F+ F+D
Sbjct: 14 KLFVGGLSWETTQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSD 63
>gi|149063557|gb|EDM13880.1| rCG21724, isoform CRA_a [Rattus norvegicus]
Length = 311
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D++ YF QFG ++
Sbjct: 28 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDD 86
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 87 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 125
>gi|426247780|ref|XP_004017654.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Ovis aries]
Length = 325
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 69 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 127
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 128 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 166
Score = 40.0 bits (92), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 26/44 (59%)
Query: 100 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ LREYF QFG ++ ++ + T RGF F+ F D VDK+
Sbjct: 24 EGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKV 67
>gi|22507308|ref|NP_683688.1| RNA-binding protein Musashi homolog 1 [Rattus norvegicus]
gi|51316134|sp|Q8K3P4.1|MSI1H_RAT RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|22073952|gb|AAK94485.1| RNA-binding protein Musashi-1 [Rattus norvegicus]
Length = 362
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D++ YF QFG ++
Sbjct: 79 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDD 137
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 138 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 176
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 61 EVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVT 119
E D PG + P++ KMF+GGL Q ++ LREYF QFG ++ ++
Sbjct: 2 ETDAPQPG--------LASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMR 53
Query: 120 NKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDKIV 161
+ T RGF F+ F D VDK+ + E + + K+
Sbjct: 54 DPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVA 95
>gi|327284916|ref|XP_003227181.1| PREDICTED: RNA-binding protein Musashi homolog 2-like, partial
[Anolis carolinensis]
Length = 438
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 65/133 (48%), Gaps = 4/133 (3%)
Query: 22 ESKCPSHEVRLAVEAGVLEVVTTRPTINNKAMEEAQSEEEVDMEIPGPPHMDKLEIGKPE 81
+ K P L+ G V P +K + AQ E+D + P + +P+
Sbjct: 81 KPKHPLCSCSLSPSRGFGFVTFADPASVDKVL--AQPHHELDSKTIDP-KVAFPRRAQPK 137
Query: 82 ANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVV 140
KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F + DVV
Sbjct: 138 MVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENEDVV 197
Query: 141 DKIRGFAFIEFND 153
+K+ F E N+
Sbjct: 198 EKVCEIHFHEINN 210
>gi|6678940|ref|NP_032655.1| RNA-binding protein Musashi homolog 1 [Mus musculus]
gi|51316207|sp|Q61474.1|MSI1H_MOUSE RecName: Full=RNA-binding protein Musashi homolog 1;
Short=Musashi-1
gi|1434857|dbj|BAA08530.1| RNA-binding protein [Mus musculus]
gi|147897761|gb|AAI40423.1| Musashi homolog 1(Drosophila) [synthetic construct]
gi|148921876|gb|AAI46539.1| Musashi homolog 1(Drosophila) [synthetic construct]
Length = 362
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 53/99 (53%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D++ YF QFG ++
Sbjct: 79 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDD 137
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 138 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 176
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 9/102 (8%)
Query: 61 EVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVT 119
E D PG + P++ KMF+GGL Q ++ LREYF QFG ++ ++
Sbjct: 2 ETDAPQPG--------LASPDSPHDPCKMFIGGLSWQTTQEGLREYFGQFGEVKECLVMR 53
Query: 120 NKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDKIV 161
+ T RGF F+ F D VDK+ + E + + K+
Sbjct: 54 DPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTIDPKVA 95
>gi|410730475|ref|XP_003671417.2| hypothetical protein NDAI_0G03970 [Naumovozyma dairenensis CBS 421]
gi|401780235|emb|CCD26174.2| hypothetical protein NDAI_0G03970 [Naumovozyma dairenensis CBS 421]
Length = 607
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 42/67 (62%), Gaps = 1/67 (1%)
Query: 86 VKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIR 144
+ K+FVGG+ D + E+F+QFGTI ++ +K+TG RGF FI ++ D VDK+
Sbjct: 280 IGKIFVGGIGTDVRPKEFEEFFAQFGTIIDAQLMLDKDTGRSRGFGFITYDSADAVDKVC 339
Query: 145 GFAFIEF 151
+I+F
Sbjct: 340 QNKYIDF 346
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL + ED LR YF+++G + + ++ + TG RGF F+ F VD++
Sbjct: 198 KMFIGGLNWETTEDGLRNYFNKYGNVIELKIMKDGATGRSRGFGFLTFEHPSSVDEV 254
>gi|218192062|gb|EEC74489.1| hypothetical protein OsI_09957 [Oryza sativa Indica Group]
Length = 191
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 82 ANATVKKMFVGGLKDQEED-DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
A T+ KMFVGG+ D DLR +F QFG + SV+M ++ TG GFAFI+F
Sbjct: 2 ALPTLCKMFVGGIGPYTGDEDLRRHFQQFGYVASVHMPIDRHTGRHHGFAFIQFT 56
>gi|444727070|gb|ELW67577.1| Phosphate-regulating neutral endopeptidase [Tupaia chinensis]
Length = 915
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 59 EEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNM 117
E ++D ++ P L+ +P KK+FVGGL D E+ ++EYF FG IE++ +
Sbjct: 524 EHKLDGKLIDPKRAKALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENIEL 578
Query: 118 VTNKETGAKRGFAFIEFNDYDVVDKI 143
N +T +RGF FI + D + V+K+
Sbjct: 579 PMNTKTNERRGFCFITYTDEEPVNKL 604
>gi|395748932|ref|XP_002827381.2| PREDICTED: RNA-binding protein Musashi homolog 2 [Pongo abelii]
Length = 452
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 228 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 287
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 288 DVVEKVCEIHFHEINN 303
>gi|34419189|dbj|BAC84953.1| RNA-binding protein Musashi-1 [Cynops pyrrhogaster]
Length = 169
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 8 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 66
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 67 AMLMFDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINN 105
>gi|395531900|ref|XP_003768011.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Sarcophilus
harrisii]
Length = 345
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 101 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 160
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 161 DVVEKVCEIHFHEINN 176
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+
Sbjct: 21 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 77
>gi|302760911|ref|XP_002963878.1| hypothetical protein SELMODRAFT_4662 [Selaginella moellendorffii]
gi|302813190|ref|XP_002988281.1| hypothetical protein SELMODRAFT_4658 [Selaginella moellendorffii]
gi|300144013|gb|EFJ10700.1| hypothetical protein SELMODRAFT_4658 [Selaginella moellendorffii]
gi|300169146|gb|EFJ35749.1| hypothetical protein SELMODRAFT_4662 [Selaginella moellendorffii]
Length = 188
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 1/74 (1%)
Query: 81 EANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
A++ KK+FVGGL + EDD R+YF QFGTI V ++ + T RGF FI F+ +
Sbjct: 98 HASSKTKKIFVGGLGSNVTEDDFRKYFEQFGTITDVVVMYDHATQRPRGFGFITFDTEEA 157
Query: 140 VDKIRGFAFIEFND 153
VD + F E +
Sbjct: 158 VDNVLHKTFHELKE 171
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+F+GG+ + E+ L++YF +G + ++ ++ TG RGF F+ F+D + D++
Sbjct: 7 KLFIGGISWETTEEKLKDYFQAYGEVVETVIMRDRTTGRARGFGFVVFSDPNCADRV 63
>gi|148224084|ref|NP_001080489.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus laevis]
gi|27694771|gb|AAH43814.1| Hnrpab-prov protein [Xenopus laevis]
Length = 324
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 86 VKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+KK+FVGGL + ED +REYF FG IE++ + + +T +RGF FI F + D V KI
Sbjct: 147 IKKIFVGGLNPEAGEDQIREYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKI 205
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMFVGGL D + DL++YF++FG + + + TG RGF FI F D + VDK+
Sbjct: 65 KMFVGGLSWDTSKKDLKDYFAKFGEVSDCTIKMDPNTGRSRGFGFILFKDAESVDKV 121
>gi|326931600|ref|XP_003211915.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Meleagris
gallopavo]
Length = 261
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 35 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 94
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 95 DVVEKVCEIHFHEINN 110
>gi|426238559|ref|XP_004013218.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Ovis aries]
Length = 343
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 117 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 176
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 177 DVVEKVCEIHFHEINN 192
Score = 40.4 bits (93), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 30/59 (50%)
Query: 103 REYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDKIV 161
R+YFS+FG I ++ + T RGF F+ F D VDK+ G E + + K+
Sbjct: 53 RDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVA 111
>gi|113931574|ref|NP_001039236.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus (Silurana)
tropicalis]
gi|89272441|emb|CAJ82657.1| heterogeneous nuclear ribonucleoprotein A/B [Xenopus (Silurana)
tropicalis]
Length = 313
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 51/93 (54%), Gaps = 6/93 (6%)
Query: 55 EAQSEEEVDMEIPGPPHM---DKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFG 110
EA E + ++PG + D++ K E +A KMFVGGL D + DL++YFS+FG
Sbjct: 19 EACDAEAAESKVPGGQNGAEGDQINASKGEEDAG--KMFVGGLSWDTSKKDLKDYFSKFG 76
Query: 111 TIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + + TG RGF FI F D VDK+
Sbjct: 77 EVSDCTIKMDPNTGRSRGFGFILFKDAASVDKV 109
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 86 VKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+KK+FVGGL + ED +REYF FG IE++ + + +T +RGF FI F + + V KI
Sbjct: 135 IKKIFVGGLNPEAGEDKIREYFETFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKI 193
>gi|414873072|tpg|DAA51629.1| TPA: hypothetical protein ZEAMMB73_407391 [Zea mays]
Length = 177
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 57/110 (51%), Gaps = 5/110 (4%)
Query: 35 EAGVLEVVTTRPTINNKAMEEAQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGL 94
EA VL + +R ++N+ + VD++ +I + K+FVGGL
Sbjct: 60 EAAVLRALDSRESVNHDTFFRCR----VDVKRAEKKETISAQISATSNSNAGSKIFVGGL 115
Query: 95 KDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+D +D L YF +FGTI ++++++TG RGF F+ F+ + D++
Sbjct: 116 RDNITKDHLINYFGRFGTITDAVVMSDRQTGKARGFGFVTFDSKEATDEV 165
>gi|345489599|ref|XP_003426177.1| PREDICTED: heterogeneous nuclear ribonucleoprotein 27C-like isoform
2 [Nasonia vitripennis]
Length = 445
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 60 EEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMV 118
++D P + + KP+ + K+F+GGL E DLR +F +FG + V ++
Sbjct: 76 HQLDGRTIDPKPCNPRTLQKPKRSGGFPKVFLGGLPSNVTETDLRSFFQRFGKVMEVVIM 135
Query: 119 TNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV 156
++E RGF F+ F D D VD+ G F+ N V
Sbjct: 136 YDQEKKKSRGFGFLSFEDEDAVDRCVGEHFVNLNGKQV 173
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 34/50 (68%), Gaps = 1/50 (2%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 136
K+FVGGL + +++L+ YFS++G + ++ N E+G RGF F+ F+D
Sbjct: 14 KLFVGGLSWETTQENLQRYFSRYGEVIDCVVMKNSESGRSRGFGFVTFSD 63
>gi|403179564|ref|XP_003888551.1| hypothetical protein PGTG_22696 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165112|gb|EHS62844.1| hypothetical protein PGTG_22696 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 482
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMFVGGL + ED L++YF+QFG + ++ + G RGFAF+ F D VV+K+
Sbjct: 128 KMFVGGLNWETTEDALKQYFAQFGNVVHCTIMRDPTNGRSRGFAFLTFADPTVVNKV 184
>gi|119614918|gb|EAW94512.1| musashi homolog 2 (Drosophila), isoform CRA_g [Homo sapiens]
Length = 255
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 102 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 161
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 162 DVVEKVCEIHFHEINN 177
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 147 AFIEFNDYDVVDKIV 161
E + + K+
Sbjct: 82 PHHELDSKTIDPKVA 96
>gi|339243191|ref|XP_003377521.1| putative RNA recognition motif protein [Trichinella spiralis]
gi|316973670|gb|EFV57234.1| putative RNA recognition motif protein [Trichinella spiralis]
Length = 231
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%), Gaps = 1/68 (1%)
Query: 86 VKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIR 144
KK+FVGGL +D++ YF+Q+G IE ++ +K T RGF FI F++ DVV+K+
Sbjct: 5 TKKIFVGGLSASTTLEDMKNYFTQYGRIEDSMLMFDKSTNRHRGFGFITFDNEDVVEKVV 64
Query: 145 GFAFIEFN 152
F E N
Sbjct: 65 EIHFHEIN 72
>gi|414873071|tpg|DAA51628.1| TPA: hypothetical protein ZEAMMB73_681924 [Zea mays]
Length = 278
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 56/110 (50%), Gaps = 5/110 (4%)
Query: 35 EAGVLEVVTTRPTINNKAMEEAQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGL 94
EA VL + R ++N+ + VD++ +I + K+FVGGL
Sbjct: 60 EAAVLRALDARESVNHDTFFRCR----VDVKRAEKKETISAQISATSNSNAGSKIFVGGL 115
Query: 95 KDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+D +D L YF +FGTI ++++++TG RGF F+ F+ + D++
Sbjct: 116 RDNITKDHLINYFGRFGTITDAVVMSDRQTGKARGFGFVTFDSKEATDEV 165
>gi|397525478|ref|XP_003832693.1| PREDICTED: RNA-binding protein Musashi homolog 1 [Pan paniscus]
Length = 424
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 152 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 210
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 211 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINN 249
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 33/64 (51%)
Query: 98 EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVV 157
E + LREYF QFG ++ ++ + T RGF F+ F D VDK+ + E + +
Sbjct: 105 EGEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSRHELDSKTID 164
Query: 158 DKIV 161
K+
Sbjct: 165 PKVA 168
>gi|62738307|pdb|1WTB|A Chain A, Complex Structure Of The C-Terminal Rna-Binding Domain Of
Hnrnp D (Auf1) With Telomere Dna
gi|62738382|pdb|1X0F|A Chain A, Complex Structure Of The C-Terminal Rna-Binding Domain Of
Hnrnp D(Auf1) With Telomeric Dna
Length = 79
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 86 VKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
VKK+FVGGL D E+ +REYF FG +ES+ + + +T +RGF FI F + + V KI
Sbjct: 1 VKKIFVGGLSPDTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKI 59
>gi|388858447|emb|CCF48041.1| related to HRP1-subunit of cleavage factor I [Ustilago hordei]
Length = 578
Score = 56.6 bits (135), Expect = 4e-06, Method: Composition-based stats.
Identities = 29/57 (50%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMFVGGL D ED LR YFSQFG I ++ + TG RGFAF+ F D V+ +
Sbjct: 167 KMFVGGLNWDTTEDSLRRYFSQFGEIGHCTIMRDNLTGRSRGFAFLNFVDPKAVNTV 223
Score = 41.2 bits (95), Expect = 0.15, Method: Composition-based stats.
Identities = 19/51 (37%), Positives = 29/51 (56%), Gaps = 1/51 (1%)
Query: 87 KKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 136
+K+FVGGL R++F QFG + + ++ETG RGF F+ + D
Sbjct: 279 QKLFVGGLPASITPVTFRQFFEQFGPLSECTCMMDRETGKPRGFGFLTYVD 329
>gi|41056104|ref|NP_957403.1| musashi homolog 2 [Danio rerio]
gi|32822918|gb|AAH55251.1| Musashi homolog 2b (Drosophila) [Danio rerio]
Length = 408
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 102 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 161
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 162 DVVEKVCEIHFHEINN 177
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQ 81
Query: 147 AFIEFNDYDVVDKIV 161
E + + K+
Sbjct: 82 PHHELDSKTIDPKVA 96
>gi|181914|gb|AAA35781.1| DNA-binding protein [Homo sapiens]
Length = 328
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 136 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 190
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RG FI F + + V KI
Sbjct: 191 ELPMDNKTNKRRGLCFITFKEEEPVKKI 218
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 77 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 133
>gi|254566735|ref|XP_002490478.1| Subunit of cleavage factor I [Komagataella pastoris GS115]
gi|238030274|emb|CAY68197.1| Subunit of cleavage factor I [Komagataella pastoris GS115]
gi|328350869|emb|CCA37269.1| Nuclear polyadenylated RNA-binding protein 4 [Komagataella pastoris
CBS 7435]
Length = 462
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGG+ + E+D +YFSQFGTI ++ +K+TG RGF F+ ++ D VD++
Sbjct: 238 KIFVGGIAAEVTEEDFTDYFSQFGTIIDAQLMIDKDTGRSRGFGFVTYDSPDAVDRV 294
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL + E+ LR YF QFG I + ++ + TG RGF F+ F VD++
Sbjct: 154 KMFIGGLNWETTEETLRNYFGQFGDITDLTIMRDNATGRSRGFGFLTFTKTASVDEV 210
>gi|296477081|tpg|DAA19196.1| TPA: musashi 2-like [Bos taurus]
Length = 324
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 98 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 157
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 158 DVVEKVCEIHFHEINN 173
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 147 AFIEFNDYDVVDKIV 161
E + + K+
Sbjct: 78 PHHELDSKTIDPKVA 92
>gi|194217163|ref|XP_001500456.2| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog
2-like, partial [Equus caballus]
Length = 323
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 97 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 156
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 157 DVVEKVCEIHFHEINN 172
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 32/64 (50%)
Query: 98 EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVV 157
D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G E + +
Sbjct: 28 SPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTID 87
Query: 158 DKIV 161
K+
Sbjct: 88 PKVA 91
>gi|148683902|gb|EDL15849.1| Musashi homolog 2 (Drosophila), isoform CRA_d [Mus musculus]
Length = 250
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 70 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 129
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 130 DVVEKVCEIHFHEINN 145
Score = 43.5 bits (101), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 100 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDK 159
D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G E + + K
Sbjct: 3 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPK 62
Query: 160 IV 161
+
Sbjct: 63 VA 64
>gi|417410217|gb|JAA51585.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 379
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 231 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 285
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ +K T +RGF FI F + + V KI
Sbjct: 286 ELPMDK-TNKRRGFCFITFKEEEPVKKI 312
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 172 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 228
>gi|363741379|ref|XP_415912.3| PREDICTED: RNA-binding protein Musashi homolog 2 [Gallus gallus]
Length = 315
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQ E+D + P + +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 67 AQPHHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVED 125
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F + DVV+K+ F E N+
Sbjct: 126 AMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINN 164
Score = 36.6 bits (83), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 27/53 (50%)
Query: 91 VGGLKDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
VGG D E+FS+FG I ++ + T RGF F+ F D VDK+
Sbjct: 13 VGGRDLGYRDVEYEHFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPGSVDKV 65
>gi|255717440|ref|XP_002555001.1| KLTH0F18766p [Lachancea thermotolerans]
gi|238936384|emb|CAR24564.1| KLTH0F18766p [Lachancea thermotolerans CBS 6340]
Length = 588
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 74 KLEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
K I + E + T K+FVGG+ D + E+FSQ+GTI ++ +K+TG RGF FI
Sbjct: 280 KRAIPREEQDKT-GKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGRSRGFGFI 338
Query: 133 EFNDYDVVDKIRGFAFIEF 151
++ D VD++ FIEF
Sbjct: 339 TYDTPDAVDRVCENKFIEF 357
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Query: 68 GPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAK 126
GP + K + + + KMF+GGL + ED+L++YFS++G + + ++ + TG
Sbjct: 189 GPGSAAEQRTNKADLSRDICKMFIGGLNWETTEDNLKDYFSKYGQVTDLKIMRDNATGRS 248
Query: 127 RGFAFIEFNDYDVVDKI 143
RGF F+ F + VD++
Sbjct: 249 RGFGFLTFAEASSVDEV 265
>gi|354472023|ref|XP_003498240.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cricetulus
griseus]
Length = 343
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 98 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 157
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 158 DVVEKVCEIHFHEINN 173
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 147 AFIEFNDYDVVDKIV 161
E + + K+
Sbjct: 78 PHHELDSKTIDPKVA 92
>gi|301759651|ref|XP_002915684.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Ailuropoda
melanoleuca]
Length = 324
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 98 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 157
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 158 DVVEKVCEIHFHEINN 173
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 147 AFIEFNDYDVVDKIV 161
E + + K+
Sbjct: 78 PHHELDSKTIDPKVA 92
>gi|108744009|gb|ABG02277.1| heterogeneous nuclear ribonucleoprotein A/B [Haplochromis burtoni]
Length = 316
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 53 MEEAQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGT 111
+E+ +EE D G K++ K E +A KMFVGGL D + DL++YFS+FG
Sbjct: 28 LEQMAGDEEQDNNTDG----GKIDASKGEEDAG--KMFVGGLSWDTSKKDLKDYFSKFGE 81
Query: 112 IESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + + TG RGF F+ F D VDK+
Sbjct: 82 VSDCTIKMDSNTGRSRGFGFVLFKDSASVDKV 113
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 86 VKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
VKK+FVGGL + E+ +REYF FG IE++ + + ++ +RGF FI + + V K
Sbjct: 139 VKKIFVGGLNPEATEETIREYFGAFGEIETIELPIDPKSKKRRGFIFITYKEETSVKK 196
>gi|401623736|gb|EJS41824.1| hrp1p [Saccharomyces arboricola H-6]
Length = 540
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 88 KMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
K+FVGG+ D + E+FSQ+GTI ++ +K+TG RGF F+ ++ D VD++
Sbjct: 246 KIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQN 305
Query: 147 AFIEFNDYDV 156
FI+F D +
Sbjct: 306 KFIDFKDRKI 315
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D ED+LREYF ++GT+ + ++ + TG RGF F+ F VD++
Sbjct: 162 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEV 218
>gi|47086453|ref|NP_997961.1| musashi homolog 2a [Danio rerio]
gi|28374420|gb|AAH45335.1| Musashi homolog 2a (Drosophila) [Danio rerio]
gi|182889228|gb|AAI64813.1| Msi2 protein [Danio rerio]
Length = 388
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 102 QPKMVTRTKKIFVGGLSASTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 161
Query: 138 DVVDKIRGFAFIEFND 153
D+V+K+ F E N+
Sbjct: 162 DIVEKVCEIHFHEINN 177
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 38/75 (50%), Gaps = 1/75 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
KMF+GGL Q D LR+YF +FG I ++ + T RGF FI F D VDK+
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFCKFGEIRECMVMRDPTTKRSRGFGFITFADVSSVDKVLAQ 81
Query: 147 AFIEFNDYDVVDKIV 161
E + + K+
Sbjct: 82 PHHELDSKTIDPKVA 96
>gi|294460252|gb|ADE75708.1| unknown [Picea sitchensis]
Length = 396
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 37/63 (58%), Gaps = 1/63 (1%)
Query: 82 ANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVV 140
A KK+FVGGL EDD R+YF QFG I V ++ + T RGF FI ++ D V
Sbjct: 96 AGPRTKKIFVGGLAPTVTEDDFRKYFEQFGNITDVVVMYDHTTQRHRGFGFITYDSEDAV 155
Query: 141 DKI 143
DK+
Sbjct: 156 DKV 158
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+F+GG+ D ED L++YF +G + V ++ ++ TG RGF F+ F D V D++
Sbjct: 7 KIFIGGISWDTSEDRLKDYFGNYGQVVDVVIMKDRTTGRARGFGFVVFGDPSVADRV 63
>gi|449479907|ref|XP_002196910.2| PREDICTED: RNA-binding protein Musashi homolog 2 isoform 1
[Taeniopygia guttata]
Length = 306
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQ E+D + P + +P+ KK+FVGGL + +D+++YF QFG +E
Sbjct: 58 AQPHHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVED 116
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F + DVV+K+ F E N+
Sbjct: 117 AMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINN 155
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 89 MFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
MF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKV 56
>gi|156376666|ref|XP_001630480.1| predicted protein [Nematostella vectensis]
gi|156217502|gb|EDO38417.1| predicted protein [Nematostella vectensis]
Length = 305
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 44/69 (63%), Gaps = 3/69 (4%)
Query: 77 IGKPEANATVKKMFVGGLKDQEEDD-LREYFSQ-FGTIESVNMVTNKETGAKRGFAFIEF 134
IGKP + VKK+FVGGLK + D+ +REYF + + ++ + +T + +RGF F+ F
Sbjct: 108 IGKPP-HLRVKKIFVGGLKPETSDEKIREYFGKAYAPVKEIEYITEHSSNRRRGFCFVSF 166
Query: 135 NDYDVVDKI 143
+ D VDKI
Sbjct: 167 DSEDTVDKI 175
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 86 VKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ K+FVGGL + ++ L+EYFS++G + V++ + TG RGFAF++F D +
Sbjct: 28 IGKLFVGGLSYETTKESLKEYFSKYGELVGVDIKMDALTGRPRGFAFVQFKHQSEADAV 86
>gi|26341844|dbj|BAC34584.1| unnamed protein product [Mus musculus]
Length = 278
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 98 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 157
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 158 DVVEKVCEIHFHEINN 173
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G
Sbjct: 18 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 77
Query: 147 AFIEFNDYDVVDKIV 161
E + + K+
Sbjct: 78 PHHELDSKTIDPKVA 92
>gi|410920299|ref|XP_003973621.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 2
[Takifugu rubripes]
Length = 350
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQ+ E+D + P + +P+ KK+FVGGL + +D++ YF QFG ++
Sbjct: 81 AQNRHELDSKTIDP-KVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKHYFDQFGKVDD 139
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F + DVV+K+ F E N+
Sbjct: 140 AMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINN 178
Score = 44.7 bits (104), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q ++ L+EYF +FG ++ ++ + T RGF F+ + D V+K+
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYTDQAGVEKV 79
>gi|327265526|ref|XP_003217559.1| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like [Anolis
carolinensis]
Length = 367
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 86 VKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
VKK+FVGGL + E+ +REYF +FG IE++ + + +T +RGF FI F + D V KI
Sbjct: 195 VKKIFVGGLNPEAAEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKI 253
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 73 DKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAF 131
D++ K E +A KMFVGGL D + DL++YF++FG + + + TG RGF F
Sbjct: 100 DQINASKNEEDAG--KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGF 157
Query: 132 IEFNDYDVVDKI 143
I F + VDK+
Sbjct: 158 ILFKEAASVDKV 169
>gi|324511674|gb|ADY44854.1| RNA-binding protein Musashi Rbp6 [Ascaris suum]
Length = 345
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 79 KPEANATVKKMFVGGLKDQEE-DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+F+GGL +D+R YF Q+G +E ++ +K T RGF FI F++
Sbjct: 125 QPKMIIKTKKVFIGGLSATSTLEDMRNYFEQYGKVEDAMLMFDKTTQRHRGFGFITFDND 184
Query: 138 DVVDKIRGFAFIEFN 152
DV DK+ F E N
Sbjct: 185 DVSDKVCEIHFHEIN 199
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 33/57 (57%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q + LR+YF +FG + ++ + T RGF FI F D V+K+
Sbjct: 45 KMFIGGLSWQTTAEGLRDYFGKFGEVNECMVMRDPATKRARGFGFITFADPASVEKV 101
>gi|225713050|gb|ACO12371.1| RNA-binding protein squid [Lepeophtheirus salmonis]
Length = 283
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 42/57 (73%), Gaps = 1/57 (1%)
Query: 87 KKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
+K+FVGGL +D ++ D++E+F FG IES+N+ T+ +TG RGFAF+ F + ++K
Sbjct: 24 RKLFVGGLPQDAKDCDIKEHFEGFGEIESINIKTDPQTGRSRGFAFVVFKSLEGLEK 80
Score = 35.8 bits (81), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 83 NATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVD 141
A K++VG LK + ++D++ +FSQ+G + +V +K ++ F FI F +
Sbjct: 99 QAKQGKVYVGKLKPEISDEDIKTHFSQYGPVANVEQPFDKTKNERKNFCFITFEKEEPAK 158
Query: 142 KI 143
K+
Sbjct: 159 KL 160
>gi|213513574|ref|NP_001133787.1| RNA-binding protein Musashi homolog 2 [Salmo salar]
gi|209155330|gb|ACI33897.1| RNA-binding protein Musashi homolog 2 [Salmo salar]
Length = 366
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF FI F
Sbjct: 102 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFITFEGE 161
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 162 DVVEKVCEIHFHEINN 177
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADAASVDKVLAQ 81
Query: 147 AFIEFNDYDVVDKIV 161
E + + K+
Sbjct: 82 PHHELDSKTIDPKVA 96
>gi|348535413|ref|XP_003455195.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like
[Oreochromis niloticus]
Length = 316
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
+Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES
Sbjct: 115 SQKEHKLNGKVIDPKKAKAMKSKEP-----VKKIFVGGLSPDTPEEKVREYFGAFGEVES 169
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
V + +T +RGF FI F + + V KI
Sbjct: 170 VELPMENKTNKRRGFCFITFKEEEPVKKI 198
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMFVGGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 57 KMFVGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPMTGRSRGFGFVLFKEPESVDKV 113
>gi|154799956|dbj|BAF75023.1| Musashi-1b [Cynops pyrrhogaster]
Length = 346
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 79 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 137
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 138 AMLMFDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINN 176
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 77 IGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
+ P++ KMF+GGL Q ++ LREYF Q+G ++ ++ + T RGF F+ F
Sbjct: 10 LSPPDSAHDPCKMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFM 69
Query: 136 DYDVVDKIRGFAFIEFNDYDVVDKIV 161
D VDK+ + E + + K+
Sbjct: 70 DQAGVDKVLAQSRHELDSKTIDPKVA 95
>gi|410980705|ref|XP_003996716.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Felis catus]
Length = 333
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 89 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 148
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 149 DVVEKVCEIHFHEINN 164
Score = 41.6 bits (96), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 101 DLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDKI 160
LR+YFS+FG I ++ + T RGF F+ F D VDK+ G E + + K+
Sbjct: 23 SLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKV 82
Query: 161 V 161
Sbjct: 83 A 83
>gi|89257430|gb|ABD64922.1| RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) containing
protein [Brassica oleracea]
Length = 426
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/80 (40%), Positives = 44/80 (55%), Gaps = 1/80 (1%)
Query: 84 ATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
AT KK+FVGGL E + ++YF+QFGTI V ++ + T RGF FI F + VD+
Sbjct: 102 ATSKKIFVGGLASSVTEAEFKKYFAQFGTITDVVVMYDHRTQRPRGFGFISFESEEAVDR 161
Query: 143 IRGFAFIEFNDYDVVDKIVC 162
+ F E N V K+
Sbjct: 162 VLQRTFHELNGKMVEVKLAV 181
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+F+GG+ + ED LREYF FG + ++ ++ TG RGF F+ F D V +++
Sbjct: 6 KLFIGGISWETTEDRLREYFQSFGEVLEAVIMKDRATGRARGFGFLVFADPTVAERV 62
>gi|154799954|dbj|BAF75022.1| Musashi-1a [Cynops pyrrhogaster]
Length = 361
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 79 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 137
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 138 AMLMFDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINN 176
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 77 IGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
+ P++ KMF+GGL Q ++ LREYF Q+G ++ ++ + T RGF F+ F
Sbjct: 10 LSPPDSAHDPCKMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFM 69
Query: 136 DYDVVDKIRGFAFIEFNDYDVVDKIV 161
D VDK+ + E + + K+
Sbjct: 70 DQAGVDKVLAQSRHELDSKTIDPKVA 95
>gi|417410064|gb|JAA51513.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1, partial
[Desmodus rotundus]
Length = 360
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 7/88 (7%)
Query: 57 QSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESV 115
Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES+
Sbjct: 212 QKEHKLNGKVIDPKRAKAMKTKEP-----VKKIFVGGLSPDTPEEKIREYFGGFGEVESI 266
Query: 116 NMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ +K T +RGF FI F + + V KI
Sbjct: 267 ELPMDK-TNKRRGFCFITFKEEEPVKKI 293
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D + DL++YFS+FG + + + TG RGF F+ F + + VDK+
Sbjct: 153 KMFIGGLSWDTTKKDLKDYFSKFGEVVDCTLKLDPITGRSRGFGFVLFKESESVDKV 209
>gi|410920297|ref|XP_003973620.1| PREDICTED: RNA-binding protein Musashi homolog 1-like isoform 1
[Takifugu rubripes]
Length = 331
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQ+ E+D + P + +P+ KK+FVGGL + +D++ YF QFG ++
Sbjct: 81 AQNRHELDSKTIDP-KVAFPRRAQPKLVTRTKKIFVGGLSVNTTIEDVKHYFDQFGKVDD 139
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F + DVV+K+ F E N+
Sbjct: 140 AMLMFDKTTNRHRGFGFVTFENEDVVEKVCEIHFHEINN 178
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q ++ L+EYF +FG ++ ++ + T RGF F+ + D V+K+
Sbjct: 23 KMFIGGLSWQTTQEGLKEYFCKFGEVKECMVMRDPVTKRSRGFGFVTYTDQAGVEKV 79
>gi|334322422|ref|XP_001367956.2| PREDICTED: RNA-binding protein Musashi homolog 2-like [Monodelphis
domestica]
Length = 302
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 58 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 117
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 118 DVVEKVCEIHFHEINN 133
>gi|344243477|gb|EGV99580.1| RNA-binding protein Musashi-like 2 [Cricetulus griseus]
Length = 325
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 80 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 139
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 140 DVVEKVCEIHFHEINN 155
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 89 MFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFA 147
MF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 148 FIEFNDYDVVDKIV 161
E + + K+
Sbjct: 61 HHELDSKTIDPKVA 74
>gi|154799960|dbj|BAF75025.1| Musashi-1d [Cynops pyrrhogaster]
Length = 327
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 79 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 137
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 138 AMLMFDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINN 176
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 1/68 (1%)
Query: 77 IGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
+ P++ KMF+GGL Q ++ LREYF Q+G ++ ++ + T RGF F+ F
Sbjct: 10 LSPPDSAHDPCKMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFM 69
Query: 136 DYDVVDKI 143
D VDK+
Sbjct: 70 DQAGVDKV 77
>gi|397493092|ref|XP_003817447.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Pan paniscus]
gi|403279708|ref|XP_003931388.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Saimiri
boliviensis boliviensis]
gi|194379116|dbj|BAG58109.1| unnamed protein product [Homo sapiens]
Length = 324
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 80 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 139
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 140 DVVEKVCEIHFHEINN 155
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 89 MFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFA 147
MF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 148 FIEFNDYDVVDKIV 161
E + + K+
Sbjct: 61 HHELDSKTIDPKVA 74
>gi|4938503|emb|CAB43861.1| hnRNP-like protein [Arabidopsis thaliana]
gi|7269517|emb|CAB79520.1| hnRNP-like protein [Arabidopsis thaliana]
Length = 524
Score = 56.2 bits (134), Expect = 5e-06, Method: Composition-based stats.
Identities = 36/117 (30%), Positives = 55/117 (47%), Gaps = 5/117 (4%)
Query: 41 VVTTRPTINNKAMEEAQSEEEVDMEI----PGPPHMDKLEIGKPEANATVKKMFVGGLKD 96
V+ + I+ + +E ++ D ++ P H+ G A KK+FVGGL
Sbjct: 65 VIMDKHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPS 124
Query: 97 Q-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFN 152
E + + YF QFGTI V ++ + T RGF FI F+ + VD + F E N
Sbjct: 125 SITEAEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELN 181
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/64 (34%), Positives = 41/64 (64%), Gaps = 1/64 (1%)
Query: 81 EANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
E+ + + K+F+GG+ D +E+ L+EYF ++G + ++ ++ TG RGF FI F D V
Sbjct: 2 ESASDLGKLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSV 61
Query: 140 VDKI 143
+++
Sbjct: 62 AERV 65
>gi|17157989|ref|NP_473384.1| RNA-binding protein Musashi homolog 2 isoform 1 [Mus musculus]
gi|51316506|sp|Q920Q6.1|MSI2H_MOUSE RecName: Full=RNA-binding protein Musashi homolog 2;
Short=Musashi-2
gi|15982562|dbj|BAB69485.1| RNA-binding protein Musashi2-L [Mus musculus]
gi|37619701|tpg|DAA01567.1| TPA_exp: RNA-binding protein [Mus musculus]
gi|74146912|dbj|BAE41407.1| unnamed protein product [Mus musculus]
gi|74150444|dbj|BAE32260.1| unnamed protein product [Mus musculus]
Length = 346
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 102 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 161
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 162 DVVEKVCEIHFHEINN 177
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 147 AFIEFNDYDVVDKIV 161
E + + K+
Sbjct: 82 PHHELDSKTIDPKVA 96
>gi|359320431|ref|XP_532379.3| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein Musashi homolog
2 isoform 1 [Canis lupus familiaris]
Length = 328
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 102 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 161
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 162 DVVEKVCEIHFHEINN 177
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
KMF+GGL Q + LR+YFS+FG I ++ N T RGF F+ F D VDK+ G
Sbjct: 22 KMFIGGLSWQTSPESLRDYFSKFGEIXKCLVLRNPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 147 AFIEFNDYDVVDKIV 161
E + + K+
Sbjct: 82 PHHELDSKTIDPKVA 96
>gi|154799958|dbj|BAF75024.1| Musashi-1c [Cynops pyrrhogaster]
Length = 342
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQS E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 79 AQSRHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 137
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF F+ F D+V+K+ F E N+
Sbjct: 138 AMLMFDKTTNRHRGFGFVTFEVEDIVEKVCEIHFHEINN 176
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 45/86 (52%), Gaps = 1/86 (1%)
Query: 77 IGKPEANATVKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
+ P++ KMF+GGL Q ++ LREYF Q+G ++ ++ + T RGF F+ F
Sbjct: 10 LSPPDSAHDPCKMFIGGLSWQTTQEGLREYFGQYGEVKECLVMRDPLTKRSRGFGFVTFM 69
Query: 136 DYDVVDKIRGFAFIEFNDYDVVDKIV 161
D VDK+ + E + + K+
Sbjct: 70 DQAGVDKVLAQSRHELDSKTIDPKVA 95
>gi|148683899|gb|EDL15846.1| Musashi homolog 2 (Drosophila), isoform CRA_a [Mus musculus]
Length = 296
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 52 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 111
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 112 DVVEKVCEIHFHEINN 127
>gi|119614912|gb|EAW94506.1| musashi homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 346
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 102 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 161
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 162 DVVEKVCEIHFHEINN 177
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 147 AFIEFNDYDVVDKIV 161
E + + K+
Sbjct: 82 PHHELDSKTIDPKVA 96
>gi|355568556|gb|EHH24837.1| hypothetical protein EGK_08563, partial [Macaca mulatta]
gi|355754027|gb|EHH57992.1| hypothetical protein EGM_07749, partial [Macaca fascicularis]
Length = 308
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 82 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 141
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 142 DVVEKVCEIHFHEINN 157
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G
Sbjct: 2 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 61
Query: 147 AFIEFNDYDVVDKIV 161
E + + K+
Sbjct: 62 PHHELDSKTIDPKVA 76
>gi|291405742|ref|XP_002719144.1| PREDICTED: musashi 2-like [Oryctolagus cuniculus]
Length = 306
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 80 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 139
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 140 DVVEKVCEIHFHEINN 155
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 89 MFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFA 147
MF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 148 FIEFNDYDVVDKIV 161
E + + K+
Sbjct: 61 HHELDSKTIDPKVA 74
>gi|149053819|gb|EDM05636.1| similar to RNA-binding protein Musashi2-S (predicted), isoform
CRA_a [Rattus norvegicus]
Length = 296
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 52 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 111
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 112 DVVEKVCEIHFHEINN 127
>gi|119614917|gb|EAW94511.1| musashi homolog 2 (Drosophila), isoform CRA_f [Homo sapiens]
Length = 328
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 102 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 161
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 162 DVVEKVCEIHFHEINN 177
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 147 AFIEFNDYDVVDKIV 161
E + + K+
Sbjct: 82 PHHELDSKTIDPKVA 96
>gi|392332125|ref|XP_001081205.3| PREDICTED: RNA-binding protein Musashi homolog 2-like [Rattus
norvegicus]
Length = 295
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 69 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 128
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 129 DVVEKVCEIHFHEINN 144
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 100 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDK 159
D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G E + + K
Sbjct: 2 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPK 61
Query: 160 IV 161
+
Sbjct: 62 VA 63
>gi|159163803|pdb|2CJK|A Chain A, Structure Of The Rna Binding Domain Of Hrp1 In Complex
With Rna
gi|301598362|pdb|2KM8|C Chain C, Interdomain Rrm Packing Contributes To Rna Recognition In
The Rna15, Hrp1, Anchor Rna 3' Processing Ternary
Complex
Length = 167
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 74 KLEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
K I + E + T K+FVGG+ D + E+FSQ+GTI ++ +K+TG RGF F+
Sbjct: 76 KRAIPRDEQDKT-GKIFVGGIGPDVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFV 134
Query: 133 EFNDYDVVDKIRGFAFIEFNDYDV 156
++ D VD++ FI+F D +
Sbjct: 135 TYDSADAVDRVCQNKFIDFKDRKI 158
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D ED+LREYF ++GT+ + ++ + TG RGF F+ F VD++
Sbjct: 5 KMFIGGLNWDTTEDNLREYFGKYGTVTDLKIMKDPATGRSRGFGFLSFEKPSSVDEV 61
>gi|15982560|dbj|BAB69484.1| RNA-binding protein Musashi2-S [Mus musculus]
gi|26340376|dbj|BAC33851.1| unnamed protein product [Mus musculus]
gi|26340420|dbj|BAC33873.1| unnamed protein product [Mus musculus]
gi|85057100|gb|AAI11810.1| Msi2h protein [Mus musculus]
Length = 328
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 102 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 161
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 162 DVVEKVCEIHFHEINN 177
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 147 AFIEFNDYDVVDKIV 161
E + + K+
Sbjct: 82 PHHELDSKTIDPKVA 96
>gi|390463506|ref|XP_002748435.2| PREDICTED: RNA-binding protein Musashi homolog 2, partial
[Callithrix jacchus]
Length = 295
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 69 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 128
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 129 DVVEKVCEIHFHEINN 144
Score = 43.9 bits (102), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 100 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDK 159
D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G E + + K
Sbjct: 2 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPK 61
Query: 160 IV 161
+
Sbjct: 62 VA 63
>gi|148683901|gb|EDL15848.1| Musashi homolog 2 (Drosophila), isoform CRA_c [Mus musculus]
Length = 296
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 70 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 129
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 130 DVVEKVCEIHFHEINN 145
Score = 44.3 bits (103), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 100 DDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDK 159
D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G E + + K
Sbjct: 3 DSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPK 62
Query: 160 IV 161
+
Sbjct: 63 VA 64
>gi|20373175|ref|NP_620412.1| RNA-binding protein Musashi homolog 2 isoform a [Homo sapiens]
gi|51316513|sp|Q96DH6.1|MSI2H_HUMAN RecName: Full=RNA-binding protein Musashi homolog 2;
Short=Musashi-2
gi|16306702|gb|AAH01526.1| Musashi homolog 2 (Drosophila) [Homo sapiens]
gi|123983004|gb|ABM83243.1| musashi homolog 2 (Drosophila) [synthetic construct]
gi|123997687|gb|ABM86445.1| musashi homolog 2 (Drosophila) [synthetic construct]
gi|261861224|dbj|BAI47134.1| musashi homolog 2 [synthetic construct]
gi|380784487|gb|AFE64119.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|383415747|gb|AFH31087.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|384941194|gb|AFI34202.1| RNA-binding protein Musashi homolog 2 isoform a [Macaca mulatta]
gi|392583801|dbj|BAM24698.2| musashi homolog 2 [Sus scrofa]
gi|410219648|gb|JAA07043.1| musashi homolog 2 [Pan troglodytes]
gi|410258766|gb|JAA17350.1| musashi homolog 2 [Pan troglodytes]
gi|410287210|gb|JAA22205.1| musashi homolog 2 [Pan troglodytes]
gi|410335871|gb|JAA36882.1| musashi homolog 2 [Pan troglodytes]
gi|417399031|gb|JAA46548.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 328
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 102 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 161
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 162 DVVEKVCEIHFHEINN 177
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 147 AFIEFNDYDVVDKIV 161
E + + K+
Sbjct: 82 PHHELDSKTIDPKVA 96
>gi|399218335|emb|CCF75222.1| unnamed protein product [Babesia microti strain RI]
Length = 436
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 88 KMFVGGLKDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL D ++ REYF +FGT+ ++ +K T RGF FI F VV+++
Sbjct: 136 KIFVGGLPDLTNEEFREYFEKFGTVLEATLMVDKNTNKPRGFGFITFESPSVVNEV 191
Score = 38.9 bits (89), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 89 MFVGGLKD-QEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+FVGGL ++ LR++F +G + ++ +G RGF F+ F +D ++ +
Sbjct: 38 IFVGGLSQVTTQESLRQHFETYGEMTDCVVMVEANSGRSRGFGFVTFVSHDALEAV 93
>gi|440909516|gb|ELR59416.1| RNA-binding protein Musashi-like protein 1, partial [Bos grunniens
mutus]
Length = 274
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG ++ ++ +K T RGF F+ F
Sbjct: 12 QPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESE 71
Query: 138 DVVDKIRGFAFIEFND 153
D+V+K+ F E N+
Sbjct: 72 DIVEKVCEIHFHEINN 87
>gi|355704546|gb|AES02263.1| musashi-like protein 2 [Mustela putorius furo]
Length = 306
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 81 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 140
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 141 DVVEKVCEIHFHEINN 156
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G
Sbjct: 1 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 60
Query: 147 AFIEFNDYDVVDKIV 161
E + + K+
Sbjct: 61 PHHELDSKTIDPKVA 75
>gi|432884676|ref|XP_004074535.1| PREDICTED: heterogeneous nuclear ribonucleoprotein D0-like [Oryzias
latipes]
Length = 314
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 51/89 (57%), Gaps = 6/89 (6%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
+Q E +++ ++ P ++ +P VKK+FVGGL D E+ +REYF FG +ES
Sbjct: 115 SQKEHKLNGKVIDPKKAKAMKSKEP-----VKKVFVGGLSPDTPEEKVREYFGAFGEVES 169
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ + +T +RGF FI F + + V K+
Sbjct: 170 IELPMENKTNKRRGFCFITFKEEEAVKKV 198
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMFVGGL D + DL++YF++FG + + + TG RGF F+ F D + V+K+
Sbjct: 57 KMFVGGLSWDTTKKDLKDYFAKFGEVVDCTLKLDPMTGRSRGFGFVLFKDAESVEKV 113
>gi|307206491|gb|EFN84517.1| RNA-binding protein squid [Harpegnathos saltator]
Length = 311
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+K+FVGGL ++ + +LRE+FS+FG IES+ + + TG RGFAF+ F + +DK+
Sbjct: 77 RKLFVGGLSRNTTDKELREHFSKFGEIESITVKIDPHTGISRGFAFMVFANAKAIDKL 134
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+FVGGL + +DD++ YF Q+GTI + +K ++GF FI F+ +VV K+
Sbjct: 160 KIFVGGLTPEITDDDIKTYFGQYGTIVELQAPFDKVKNQRKGFCFITFDSKEVVYKL 216
>gi|449677067|ref|XP_002163749.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like,
partial [Hydra magnipapillata]
Length = 165
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 54/108 (50%), Gaps = 13/108 (12%)
Query: 63 DMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNK 121
+M P PP D E K+FVGGL D E+ LR YF +FG +ESVN+ NK
Sbjct: 20 NMSYPVPPSSDNNE----------GKLFVGGLAWDTTEESLRNYFEKFGEVESVNLKRNK 69
Query: 122 ETGAK-RGFAFIEFNDYDVVDKIRGFAFIEFNDYDVVD-KIVCKYNIE 167
E K RGFAF++F + D++ A D +D K C ++
Sbjct: 70 EDLNKHRGFAFVKFVTQESADEVLNQAEPHILDGSKIDPKSACPMGVK 117
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/37 (56%), Positives = 27/37 (72%), Gaps = 3/37 (8%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
KPE KK+FVGGL+ + E+ LREYFSQFG I++
Sbjct: 117 KPEQR--TKKIFVGGLQTETTEEKLREYFSQFGEIKN 151
>gi|406880229|gb|EKD28634.1| RNA-binding protein [uncultured bacterium]
Length = 95
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 44/70 (62%), Gaps = 5/70 (7%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
K++VG L D E+D+R+ F G + SVNM+T+++TG +GFAF+E + + DK
Sbjct: 2 KLYVGNLSYDATEEDVRQIFEGVGPVSSVNMITDRDTGRPKGFAFVEMENKNDGDK---- 57
Query: 147 AFIEFNDYDV 156
A E ND DV
Sbjct: 58 AISELNDVDV 67
>gi|417398472|gb|JAA46269.1| Putative rna-binding protein musashi/mrna cleavage and
polyadenylation factor i complex subunit hrp1 [Desmodus
rotundus]
Length = 293
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 102 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 161
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 162 DVVEKVCEIHFHEINN 177
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 147 AFIEFNDYDVVDKIV 161
E + + K+
Sbjct: 82 PHHELDSKTIDPKVA 96
>gi|318843692|ref|NP_001188270.1| RNA-binding protein Musashi homolog 2 isoform 2 [Mus musculus]
Length = 158
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 147 AFIEFNDYDVVDKIV 161
E + + K+
Sbjct: 82 PHHELDSKTIDPKVA 96
>gi|348562530|ref|XP_003467063.1| PREDICTED: RNA-binding protein Musashi homolog 2-like [Cavia
porcellus]
Length = 285
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F +
Sbjct: 59 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFENE 118
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 119 DVVEKVCEIHFHEINN 134
>gi|198437172|ref|XP_002122781.1| PREDICTED: similar to musashi 2 [Ciona intestinalis]
Length = 386
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 78 GKPEANAT-VKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
GKP T KK+FVGGL + DDL+ YF +G +E ++ +K+T RGF F+ F+
Sbjct: 72 GKPAQMVTRTKKIFVGGLSANTVVDDLKNYFGTYGKVEDAMLMFDKQTNRHRGFGFVTFD 131
Query: 136 DYDVVDKIRGFAFIEFND 153
+ + V+K+ F E N+
Sbjct: 132 NEEPVEKVCEIHFHEINN 149
>gi|410915348|ref|XP_003971149.1| PREDICTED: RNA-binding protein Musashi homolog 2-like isoform 4
[Takifugu rubripes]
Length = 350
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 2/99 (2%)
Query: 56 AQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIES 114
AQ E+D + P + +P+ KK+FVGGL + +D+++YF QFG ++
Sbjct: 80 AQQHHELDSKTIDP-KVAFPRRAQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVDD 138
Query: 115 VNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFND 153
++ +K T RGF FI F + D+V+K+ F E N+
Sbjct: 139 AMLMFDKTTNRHRGFGFITFENEDIVEKVCEIHFHEINN 177
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDAASVDKV 78
>gi|345311474|ref|XP_001513207.2| PREDICTED: heterogeneous nuclear ribonucleoprotein A/B-like
[Ornithorhynchus anatinus]
Length = 480
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 86 VKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
VKK+FVGGL + ED +R+YF +FG IE++ + + +T +RGF FI F + + V KI
Sbjct: 295 VKKIFVGGLNPEATEDKIRDYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEEPVKKI 353
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P ++KMFVGGL D + DL++YF++FG + + + TG RGF FI F +
Sbjct: 204 RPRKQPELRKMFVGGLSWDTSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKEA 263
Query: 138 DVVDKI 143
VDK+
Sbjct: 264 ASVDKV 269
>gi|71013252|ref|XP_758567.1| hypothetical protein UM02420.1 [Ustilago maydis 521]
gi|46098225|gb|EAK83458.1| hypothetical protein UM02420.1 [Ustilago maydis 521]
Length = 588
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KMF+GGL D ED LR YFSQFG + + ++ + TG RGFAF+ F D V+ +
Sbjct: 170 KMFIGGLNWDTTEDSLRRYFSQFGEVGNCAIMRDNMTGRSRGFAFLNFVDPKAVNTV 226
Score = 45.1 bits (105), Expect = 0.009, Method: Composition-based stats.
Identities = 24/74 (32%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 84 ATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
A+ +K+FVGGL R +F QFGT+ + ++ETG RGF F+ + D ++
Sbjct: 275 ASSQKLFVGGLPPSVTPATFRTFFEQFGTLSDCTCMMDRETGKPRGFGFLTYADDSSLNH 334
Query: 143 IRGFAFIEFNDYDV 156
+ I F+ +V
Sbjct: 335 VLNTRPIVFDGKEV 348
>gi|50305631|ref|XP_452776.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641909|emb|CAH01627.1| KLLA0C12925p [Kluyveromyces lactis]
Length = 570
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 35/119 (29%), Positives = 57/119 (47%), Gaps = 24/119 (20%)
Query: 49 NNKAMEEAQSEEEVDM----EIPGPPHMDKLE-------------------IGKPEANAT 85
NNK A E + M ++PG P M +L+ K + +
Sbjct: 125 NNKENYSASVPEMLQMPQMPQMPGMPDMSQLQQLQQTMSQLQQTASQHEPKAIKADLSRD 184
Query: 86 VKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
+ KMF+GGL + E+ LR+YFS++G + V ++ + TG RGF F+ F + VD++
Sbjct: 185 INKMFIGGLNWETTEEGLRDYFSKYGAVAEVKIMKDTATGRSRGFGFLTFENASSVDEV 243
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 74 KLEIGKPEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
K I + E + T K+FVGG+ D + E+FSQ+G+I ++ +K+TG RGF FI
Sbjct: 258 KRAIPREEQDKT-GKIFVGGIGPDVRPKEFEEFFSQWGSIIDAQLMLDKDTGRSRGFGFI 316
Query: 133 EFNDYDVVDKIRGFAFIEF 151
++ D VD++ FIEF
Sbjct: 317 TYDTPDAVDRVCQNKFIEF 335
>gi|239905714|ref|YP_002952453.1| RNA-binding protein [Desulfovibrio magneticus RS-1]
gi|410464196|ref|ZP_11317654.1| RRM domain-containing RNA-binding protein [Desulfovibrio magneticus
str. Maddingley MBC34]
gi|239795578|dbj|BAH74567.1| RNA-binding protein [Desulfovibrio magneticus RS-1]
gi|409982676|gb|EKO39107.1| RRM domain-containing RNA-binding protein [Desulfovibrio magneticus
str. Maddingley MBC34]
Length = 99
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 39/61 (63%), Gaps = 1/61 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRG 145
KK++VG L EDD+R +F+ +G + SVN++T++ETG RGF F+E +D I+
Sbjct: 3 KKLYVGNLSFSSTEDDVRNHFASYGEVLSVNLITDRETGRLRGFGFVEMDDAGAAAAIQN 62
Query: 146 F 146
Sbjct: 63 L 63
>gi|26327253|dbj|BAC27370.1| unnamed protein product [Mus musculus]
Length = 192
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFTDPASVDKVLGQ 81
Query: 147 AFIEFNDYDVVDKIV 161
E + + K+
Sbjct: 82 PHHELDSKTIDPKVA 96
Score = 38.5 bits (88), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 78 GKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRG 128
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RG
Sbjct: 101 AQPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRG 152
>gi|303247333|ref|ZP_07333606.1| RNP-1 like RNA-binding protein [Desulfovibrio fructosovorans JJ]
gi|302491247|gb|EFL51136.1| RNP-1 like RNA-binding protein [Desulfovibrio fructosovorans JJ]
Length = 103
Score = 55.8 bits (133), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 136
KK++VG L EDD+R++F+ +G + SVN++T++ETG RGF F+E +D
Sbjct: 3 KKLYVGNLSFSSTEDDVRDHFAPYGEVISVNLITDRETGRLRGFGFVEMDD 53
>gi|164661105|ref|XP_001731675.1| hypothetical protein MGL_0943 [Malassezia globosa CBS 7966]
gi|159105576|gb|EDP44461.1| hypothetical protein MGL_0943 [Malassezia globosa CBS 7966]
Length = 367
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 89 MFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
MFVGGL D +E+ LR YF QFG + S ++ + +G RGFAF+ F+D V+ +
Sbjct: 1 MFVGGLNWDTDEESLRRYFGQFGPVTSCTVMRDGASGRSRGFAFVTFSDPKSVNAV 56
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 74 KLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFI 132
K I +PE + T +K FVGGL +D ++ F QFG + ++ +K+TG RGF F+
Sbjct: 71 KRAIPRPEQSKT-QKCFVGGLPQTVTQDSFKQLFQQFGHVLDSTVMMDKDTGRPRGFGFV 129
Query: 133 EFNDYDVVDKI 143
F + D V+
Sbjct: 130 TFENDDGVENT 140
>gi|81097712|gb|AAI09369.1| Msi2h protein [Mus musculus]
Length = 193
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 147 AFIEFNDYDVVDKIV 161
E + + K+
Sbjct: 82 PHHELDSKTIDPKVA 96
>gi|351713878|gb|EHB16797.1| RNA-binding protein Musashi-like protein 2 [Heterocephalus glaber]
Length = 145
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 51/105 (48%), Gaps = 11/105 (10%)
Query: 62 VDMEIPGPPHMDKLEIGKPEANATV----KKMFVGGLKDQ-EEDDLREYFSQFGTIESVN 116
+D P PH+ K EA+ T KMF+GGL Q D LR+YFS+FG I
Sbjct: 2 LDPAGPQFPHL------KGEADYTCCEVASKMFIGGLSWQTSPDSLRDYFSKFGEIRECM 55
Query: 117 MVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDVVDKIV 161
++ + T RGF F+ F D VDK+ G E + + K+
Sbjct: 56 VMRDPTTKRSRGFGFVTFADPASVDKVLGQPHHELDSKTIDPKVA 100
>gi|395845801|ref|XP_003795610.1| PREDICTED: RNA-binding protein Musashi homolog 2 [Otolemur
garnettii]
Length = 324
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 1/76 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P+ KK+FVGGL + +D+++YF QFG +E ++ +K T RGF F+ F
Sbjct: 80 QPKMVTRTKKIFVGGLSANTVVEDVKQYFEQFGKVEDAMLMFDKTTNRHRGFGFVTFESE 139
Query: 138 DVVDKIRGFAFIEFND 153
DVV+K+ F E N+
Sbjct: 140 DVVEKVCEIHFHEINN 155
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 1/74 (1%)
Query: 89 MFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFA 147
MF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G
Sbjct: 1 MFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQP 60
Query: 148 FIEFNDYDVVDKIV 161
E + + K+
Sbjct: 61 HHELDSKTIDPKVA 74
>gi|414883901|tpg|DAA59915.1| TPA: hypothetical protein ZEAMMB73_814821 [Zea mays]
Length = 448
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 58/121 (47%), Gaps = 5/121 (4%)
Query: 34 VEAGVLEVVTT-RPTINNKAMEEAQSEEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVG 92
+A V E VT + TI+ + +E ++ D I + G P T +K+FVG
Sbjct: 56 ADAAVAERVTMDKHTIDGRMVEAKKAVPRDDHSIV--SKSNGSSTGSPGPGRT-RKIFVG 112
Query: 93 GLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEF 151
GL E D R YF QFG I V ++ + T RGF FI ++ D VDK +F E
Sbjct: 113 GLPSSVTEADFRRYFEQFGIITDVVVMYDHNTQRPRGFGFITYDSEDAVDKALHKSFHEL 172
Query: 152 N 152
N
Sbjct: 173 N 173
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 84 ATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
A K+FVGG+ + ED LREYF +FG + ++ ++ TG RGF F+ F D V ++
Sbjct: 4 ADYGKLFVGGISWETSEDRLREYFGRFGEVTEAVIMRDRSTGRARGFGFVVFADAAVAER 63
Query: 143 I 143
+
Sbjct: 64 V 64
>gi|374812572|ref|ZP_09716309.1| RNA-binding protein [Treponema primitia ZAS-1]
Length = 90
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 86 VKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFN 135
KK++VG L + ED+LR FS FGT+ESV ++T+++TG +GF F+E +
Sbjct: 2 AKKLYVGNLSYNTHEDNLRSLFSAFGTVESVKIITDRDTGNSKGFGFVEMS 52
>gi|344248218|gb|EGW04322.1| Heterogeneous nuclear ribonucleoprotein A1 [Cricetulus griseus]
Length = 98
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 38/54 (70%), Gaps = 1/54 (1%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAF 131
+P A+ TVKK+FVGG+K D EE LR+YF Q+G IE + ++T++ +G K+
Sbjct: 26 RPGAHLTVKKIFVGGIKEDTEEHHLRDYFEQYGKIEVIEIMTDRGSGKKKSLPL 79
>gi|297790889|ref|XP_002863329.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297309164|gb|EFH39588.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 431
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 84 ATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDK 142
+T KK+FVGGL E + ++YF+QFG I V ++ + T RGF FI ++ D VDK
Sbjct: 103 STTKKIFVGGLASSVTEAEFKKYFAQFGMITDVVVMYDHRTQRPRGFGFISYDSEDAVDK 162
Query: 143 IRGFAFIEFN 152
+ F E N
Sbjct: 163 VLQKTFHELN 172
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
K+F+GG+ + ED LREYF FG + ++ ++ TG RGF F+ F D V +++
Sbjct: 7 KLFIGGISWETSEDRLREYFHSFGEVLEAVIMKDRATGRARGFGFVVFADPIVAERV 63
>gi|260946239|ref|XP_002617417.1| hypothetical protein CLUG_02861 [Clavispora lusitaniae ATCC 42720]
gi|238849271|gb|EEQ38735.1| hypothetical protein CLUG_02861 [Clavispora lusitaniae ATCC 42720]
Length = 233
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 55/98 (56%), Gaps = 11/98 (11%)
Query: 77 IGKPEANATVKK------MFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGF 129
+ K EA+A K +++G L K +E +L++YFSQFG I V + NK+TGA R +
Sbjct: 74 LTKAEADAPSKSSKKRGVIYIGRLPKSFQEYELKKYFSQFGDILKVRVSRNKKTGASRHY 133
Query: 130 AFIEFNDYDVVDKIRGFAFIEFNDYDVVDKIVCKYNIE 167
FIEF DY+V A N+Y +V ++ + IE
Sbjct: 134 GFIEFKDYEVAK----VAADTMNNYLLVGHLLKVHVIE 167
>gi|426219507|ref|XP_004003963.1| PREDICTED: uncharacterized protein LOC101101951 [Ovis aries]
Length = 503
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 79 KPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDY 137
+P KMF+GGL D + DL EY S+FG + + T+ TG RGF F+ F D
Sbjct: 283 RPPPTFISSKMFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDPVTGRSRGFGFVLFKDA 342
Query: 138 DVVDKIRGFAFIEFNDYDVVDKIV 161
VDK+ +E ++ + K++
Sbjct: 343 ASVDKV-----LELKEHKLDGKLI 361
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
KK+FVG L D E+ ++EYF FG IE++ + + +T +RGF FI + D + V K+
Sbjct: 376 KKVFVGVLSPDTSEEQIKEYFGAFGEIENIELPMDTKTNERRGFCFITYTDEEPVKKL 433
>gi|402899734|ref|XP_003912843.1| PREDICTED: uncharacterized protein LOC101004762 [Papio anubis]
Length = 362
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 88 KMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
KMF+GGL Q D LR+YFS+FG I ++ + T RGF F+ F D VDK+ G
Sbjct: 22 KMFIGGLSWQTSPDSLRDYFSKFGEIRECMVMRDPTTKRSRGFGFVTFADPASVDKVLGQ 81
Query: 147 AFIEFNDYDVVDKIV 161
E + + K+
Sbjct: 82 PHHELDSKTIDPKVA 96
>gi|444721584|gb|ELW62314.1| Heterogeneous nuclear ribonucleoprotein D-like protein [Tupaia
chinensis]
Length = 301
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 6/86 (6%)
Query: 59 EEEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNM 117
E ++D ++ GP L+ +P KK+FVGGL D E+ ++EYF FG IE++ +
Sbjct: 91 EHKLDGKLIGPQRAKALKGKEPP-----KKVFVGGLSPDTSEEQIKEYFGAFGEIENIEL 145
Query: 118 VTNKETGAKRGFAFIEFNDYDVVDKI 143
+ +T +RGF FI + D + V K+
Sbjct: 146 PMDTKTNERRGFCFITYTDEEPVKKL 171
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%), Gaps = 6/75 (8%)
Query: 88 KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGF 146
K+F+GGL D + DL EY S+FG + + T+ TG RGF F+ F D VDK+
Sbjct: 30 KLFIGGLSWDTSKKDLTEYLSRFGEVVDCTIKTDTVTGRSRGFGFVLFKDAASVDKV--- 86
Query: 147 AFIEFNDYDVVDKIV 161
+E ++ + K++
Sbjct: 87 --LELKEHKLDGKLI 99
>gi|386394474|ref|ZP_10079255.1| RRM domain-containing RNA-binding protein [Desulfovibrio sp. U5L]
gi|385735352|gb|EIG55550.1| RRM domain-containing RNA-binding protein [Desulfovibrio sp. U5L]
Length = 108
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 136
KK++VG L EDD+R++F+ +G + SVN++T++ETG RGF F+E +D
Sbjct: 3 KKLYVGNLSFSSSEDDVRDHFAPYGEVISVNLITDRETGRLRGFGFVEMDD 53
>gi|357634909|ref|ZP_09132787.1| RNP-1 like RNA-binding protein [Desulfovibrio sp. FW1012B]
gi|357583463|gb|EHJ48796.1| RNP-1 like RNA-binding protein [Desulfovibrio sp. FW1012B]
Length = 107
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 38/51 (74%), Gaps = 1/51 (1%)
Query: 87 KKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 136
KK++VG L EDD+R++F+ +G + SVN++T++ETG RGF F+E +D
Sbjct: 3 KKLYVGNLSFSSSEDDVRDHFAPYGEVISVNLITDRETGRLRGFGFVEMDD 53
>gi|242047760|ref|XP_002461626.1| hypothetical protein SORBIDRAFT_02g005670 [Sorghum bicolor]
gi|241925003|gb|EER98147.1| hypothetical protein SORBIDRAFT_02g005670 [Sorghum bicolor]
Length = 453
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 76 EIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEF 134
IG P T +K+FVGGL E D R YF QFG I V ++ + T RGF FI +
Sbjct: 101 SIGSPGPGRT-RKIFVGGLPSNVTEADFRRYFEQFGVITDVVVMYDHNTQRPRGFGFITY 159
Query: 135 NDYDVVDKIRGFAFIEFN 152
+ D VDK +F E N
Sbjct: 160 DSEDAVDKALHKSFHELN 177
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 4/67 (5%)
Query: 81 EANATVK---KMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFND 136
EA A V K+FVGG+ + ED LR+YF +FG + ++ ++ TG RGF F+ F D
Sbjct: 2 EAAAAVADYGKLFVGGISWETSEDRLRDYFGRFGEVTEAVIMRDRSTGRARGFGFVVFAD 61
Query: 137 YDVVDKI 143
V +++
Sbjct: 62 PAVAERV 68
>gi|396473500|ref|XP_003839355.1| hypothetical protein LEMA_P030280.1 [Leptosphaeria maculans JN3]
gi|312215924|emb|CBX95876.1| hypothetical protein LEMA_P030280.1 [Leptosphaeria maculans JN3]
Length = 547
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 25/61 (40%), Positives = 37/61 (60%), Gaps = 1/61 (1%)
Query: 82 ANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVV 140
AN+ +KMF+GGL + ED L+ YF+QFG + ++ + TG RGF F+ F D V
Sbjct: 82 ANSQCRKMFIGGLNWETTEDSLKGYFTQFGEVSECTVMRDSATGRSRGFGFLTFRDPKCV 141
Query: 141 D 141
+
Sbjct: 142 N 142
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 81 EANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDV 139
E K+FVGG+ ++ E+D +F QFG + ++ +KETG RGF F+ F+
Sbjct: 165 EEQERTSKIFVGGVSQEATEEDFTAFFKQFGRVVDATLMMDKETGRPRGFGFVTFDGDAA 224
Query: 140 VD 141
VD
Sbjct: 225 VD 226
>gi|307170451|gb|EFN62721.1| Heterogeneous nuclear ribonucleoprotein 27C [Camponotus floridanus]
Length = 275
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 1/98 (1%)
Query: 60 EEVDMEIPGPPHMDKLEIGKPEANATVKKMFVGGLKDQ-EEDDLREYFSQFGTIESVNMV 118
++D P + + KP+ + K+F+GGL E DLR YF++FG + V ++
Sbjct: 32 HQLDGRTIDPKPCNPRTLQKPKRSGGFPKVFLGGLPSNVTETDLRSYFTRFGKVMEVVIM 91
Query: 119 TNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV 156
++E RGF F+ F D + VD+ F+ N V
Sbjct: 92 YDQEKKKSRGFGFLSFEDEEAVDRCVAEHFVNLNGKQV 129
>gi|45384514|ref|NP_990659.1| heterogeneous nuclear ribonucleoprotein A/B [Gallus gallus]
gi|515838|emb|CAA56586.1| single stranded D box binding factor [Gallus gallus]
Length = 302
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 86 VKKMFVGGLKDQE-EDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKI 143
VKK+FVGGL + E+ +REYF +FG IE++ + + +T +RGF FI F + D V K+
Sbjct: 173 VKKIFVGGLNPEATEEKIREYFGEFGEIEAIELPMDPKTNKRRGFVFITFKEEDPVKKV 231
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 73 DKLEIGKPEANATVKKMFVGGLK-DQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAF 131
D++ K E +A KMFVGGL D + DL++YF++FG + + + TG RGF F
Sbjct: 78 DQINASKNEEDAG--KMFVGGLSWDTSKKDLKDYFTKFGEVTDCTIKMDPNTGRSRGFGF 135
Query: 132 IEFNDYDVVDKI 143
I F + V+K+
Sbjct: 136 ILFKEPGSVEKV 147
>gi|360044778|emb|CCD82326.1| rna-binding protein musashi-related [Schistosoma mansoni]
Length = 505
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 57 QSEEEVDMEIPGPPHM-DKLEIGKPEANATVK-------KMFVGGLK-DQEEDDLREYFS 107
+++E VD + H+ D E+ N +K K+FVGG+ D +E+ +R +FS
Sbjct: 18 KNDESVDWVLRQKTHLIDLKEVDPKRCNVNMKGKNRRSLKVFVGGIAFDHDENIIRNFFS 77
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV 156
+G + VN++ + RGFAF+ F+D +VV + ++ N V
Sbjct: 78 SYGRVTDVNLLAGQTKPRHRGFAFVGFDDEEVVRNLIKLHYLNLNGKQV 126
>gi|226483447|emb|CAX74024.1| Heterogeneous nuclear ribonucleoprotein 27C [Schistosoma japonicum]
Length = 543
Score = 55.5 bits (132), Expect = 8e-06, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 56/109 (51%), Gaps = 9/109 (8%)
Query: 57 QSEEEVDMEIPGPPHM-DKLEIGKPEANATVK-------KMFVGGLK-DQEEDDLREYFS 107
+++E VD + H+ D E+ N +K K+FVGG+ D +E+ +R +FS
Sbjct: 60 KNDESVDWVLRQKTHLIDLKEVDPKRCNVNMKGKNRRSLKVFVGGIAFDHDENIIRNFFS 119
Query: 108 QFGTIESVNMVTNKETGAKRGFAFIEFNDYDVVDKIRGFAFIEFNDYDV 156
+G + VN++ + RGFAF+ F+D +VV + ++ N V
Sbjct: 120 SYGRVTDVNLLAGQTKPRHRGFAFVGFDDEEVVRNLIKLHYLNLNGKQV 168
Score = 53.5 bits (127), Expect = 3e-05, Method: Composition-based stats.
Identities = 26/63 (41%), Positives = 39/63 (61%), Gaps = 2/63 (3%)
Query: 80 PEANATVKKMFVGGL-KDQEEDDLREYFSQFGTIESVNMVTNKETGAKRGFAFIEFNDYD 138
P+ N V K+FVGGL + D L+ YFS+FG IE ++ + TG RGF +++F + +
Sbjct: 5 PQGNE-VGKLFVGGLHQSTTNDSLKLYFSKFGDIEESTVMMDNRTGRSRGFGYVKFKNDE 63
Query: 139 VVD 141
VD
Sbjct: 64 SVD 66
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.316 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,650,278,787
Number of Sequences: 23463169
Number of extensions: 106262299
Number of successful extensions: 326481
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8761
Number of HSP's successfully gapped in prelim test: 5831
Number of HSP's that attempted gapping in prelim test: 304045
Number of HSP's gapped (non-prelim): 26486
length of query: 168
length of database: 8,064,228,071
effective HSP length: 128
effective length of query: 40
effective length of database: 9,355,909,735
effective search space: 374236389400
effective search space used: 374236389400
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)