BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy4001
(925 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 195 bits (496), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 126/360 (35%), Positives = 181/360 (50%), Gaps = 75/360 (20%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEV 575
GAFGEV LVR T +Y MK + K ++++ D+ + + I AF
Sbjct: 80 GAFGEVQLVRHKSTRKVYAMKLLSK-------FEMIKRSDSAFFWEERDIM----AFANS 128
Query: 576 TLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAV 635
V ++ Y + + LY VM+Y+PGGDL++L+ + E ARFY AE+ A+
Sbjct: 129 PWVVQL----FYAFQDDRY--LYMVMEYMPGGDLVNLMSNYDV-PEKWARFYTAEVVLAL 181
Query: 636 ESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEP 695
+++H MGFIHRD+KPDN+L+D+ GH+KL DF
Sbjct: 182 DAIHSMGFIHRDVKPDNMLLDKSGHLKLADF----------------------------- 212
Query: 696 SEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG----Y 751
GT C +N RC + VGTP+YI+PEVL G Y
Sbjct: 213 ------GT----CMKMNK----------EGMVRC--DTAVGTPDYISPEVLKSQGGDGYY 250
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ 811
+ CDWWSVGV LYEMLVG PF A++ T K++N ++ L P + +S E +LI
Sbjct: 251 GRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICA 310
Query: 812 LCTGADKRLGKNA-SEVKAHPFFSNVDFE-KGVRTLTPPHIPRIQNSMDTSNFDPVDPDK 869
T + RLG+N E+K H FF N + + +R P +P + + +DTSNFD ++ DK
Sbjct: 311 FLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDK 370
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 48/70 (68%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
+R T +YAMK L K +++KR+ A ERDI+A A++ WVV+L+Y+FQD LY V
Sbjct: 88 VRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV 147
Query: 139 MDYIPGEKLI 148
M+Y+PG L+
Sbjct: 148 MEYMPGGDLV 157
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 5/57 (8%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEY 57
MK L K +++KR+ A ERDI+A A++ WVV+L+Y+FQ D ++ + MEY
Sbjct: 99 MKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM-----VMEY 150
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 432 MLSQKESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
LS+ + +++ +M + +K IG GAFGEV LVR T +YAMK + K
Sbjct: 50 FLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSK 104
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 195 bits (496), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 126/360 (35%), Positives = 181/360 (50%), Gaps = 75/360 (20%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEV 575
GAFGEV LVR T +Y MK + K ++++ D+ + + I AF
Sbjct: 85 GAFGEVQLVRHKSTRKVYAMKLLSK-------FEMIKRSDSAFFWEERDIM----AFANS 133
Query: 576 TLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAV 635
V ++ Y + + LY VM+Y+PGGDL++L+ + E ARFY AE+ A+
Sbjct: 134 PWVVQL----FYAFQDDRY--LYMVMEYMPGGDLVNLMSNYDV-PEKWARFYTAEVVLAL 186
Query: 636 ESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEP 695
+++H MGFIHRD+KPDN+L+D+ GH+KL DF
Sbjct: 187 DAIHSMGFIHRDVKPDNMLLDKSGHLKLADF----------------------------- 217
Query: 696 SEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG----Y 751
GT C +N RC + VGTP+YI+PEVL G Y
Sbjct: 218 ------GT----CMKMNK----------EGMVRC--DTAVGTPDYISPEVLKSQGGDGYY 255
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ 811
+ CDWWSVGV LYEMLVG PF A++ T K++N ++ L P + +S E +LI
Sbjct: 256 GRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICA 315
Query: 812 LCTGADKRLGKNA-SEVKAHPFFSNVDFE-KGVRTLTPPHIPRIQNSMDTSNFDPVDPDK 869
T + RLG+N E+K H FF N + + +R P +P + + +DTSNFD ++ DK
Sbjct: 316 FLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDK 375
Score = 69.3 bits (168), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 48/70 (68%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
+R T +YAMK L K +++KR+ A ERDI+A A++ WVV+L+Y+FQD LY V
Sbjct: 93 VRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV 152
Query: 139 MDYIPGEKLI 148
M+Y+PG L+
Sbjct: 153 MEYMPGGDLV 162
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 5/57 (8%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEY 57
MK L K +++KR+ A ERDI+A A++ WVV+L+Y+FQ D ++ + MEY
Sbjct: 104 MKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM-----VMEY 155
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 432 MLSQKESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
LS+ + +++ +M + +K IG GAFGEV LVR T +YAMK + K
Sbjct: 55 FLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSK 109
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 195 bits (496), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 126/360 (35%), Positives = 181/360 (50%), Gaps = 75/360 (20%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEV 575
GAFGEV LVR T +Y MK + K ++++ D+ + + I AF
Sbjct: 85 GAFGEVQLVRHKSTRKVYAMKLLSK-------FEMIKRSDSAFFWEERDIM----AFANS 133
Query: 576 TLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAV 635
V ++ Y + + LY VM+Y+PGGDL++L+ + E ARFY AE+ A+
Sbjct: 134 PWVVQL----FYAFQDDRY--LYMVMEYMPGGDLVNLMSNYDV-PEKWARFYTAEVVLAL 186
Query: 636 ESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEP 695
+++H MGFIHRD+KPDN+L+D+ GH+KL DF
Sbjct: 187 DAIHSMGFIHRDVKPDNMLLDKSGHLKLADF----------------------------- 217
Query: 696 SEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG----Y 751
GT C +N RC + VGTP+YI+PEVL G Y
Sbjct: 218 ------GT----CMKMNK----------EGMVRC--DTAVGTPDYISPEVLKSQGGDGYY 255
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ 811
+ CDWWSVGV LYEMLVG PF A++ T K++N ++ L P + +S E +LI
Sbjct: 256 GRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNHKNSLTFPDDNDISKEAKNLICA 315
Query: 812 LCTGADKRLGKNA-SEVKAHPFFSNVDFE-KGVRTLTPPHIPRIQNSMDTSNFDPVDPDK 869
T + RLG+N E+K H FF N + + +R P +P + + +DTSNFD ++ DK
Sbjct: 316 FLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLRDTVAPVVPDLSSDIDTSNFDDLEEDK 375
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/70 (47%), Positives = 48/70 (68%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
+R T +YAMK L K +++KR+ A ERDI+A A++ WVV+L+Y+FQD LY V
Sbjct: 93 VRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYMV 152
Query: 139 MDYIPGEKLI 148
M+Y+PG L+
Sbjct: 153 MEYMPGGDLV 162
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%), Gaps = 5/57 (8%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEY 57
MK L K +++KR+ A ERDI+A A++ WVV+L+Y+FQ D ++ + MEY
Sbjct: 104 MKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAFQDDRYLYM-----VMEY 155
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%)
Query: 432 MLSQKESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
LS+ + +++ +M + +K IG GAFGEV LVR T +YAMK + K
Sbjct: 55 FLSRYKDTINKIRDLRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSK 109
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 192 bits (488), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 178/350 (50%), Gaps = 71/350 (20%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKC-------VGAF-GEVTLVRKIDTNHLYVMKGS-- 592
G FGEV +V+ +T +Y MK + K F E ++ D + + +
Sbjct: 101 GAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQ 160
Query: 593 PHNNLYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
N+LY VMDY GGDL++LL K + E +ARFYI E+ A++S+H++ ++HRDIKPD
Sbjct: 161 DENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPD 220
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCI 711
N+L+D +GHI+L DFG C + N D Q S+
Sbjct: 221 NVLLDVNGHIRLADFGSCL-----------KMNDDGTVQSSVA----------------- 252
Query: 712 NSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVL--LRTG---YTQLCDWWSVGVILYE 766
VGTP+YI+PE+L + G Y CDWWS+GV +YE
Sbjct: 253 -----------------------VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYE 289
Query: 767 MLVGSPPFLANTSAETQYKVINWESCLHIPAE-AQLSPEGADLILQLCTGADKRLGKNAS 825
ML G PF A + ET K++N E P+ +S E DLI +L ++RLG+N
Sbjct: 290 MLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRERRLGQNGI 349
Query: 826 E-VKAHPFFSNVDFEKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLRNSD 874
E K H FF +++E +R L P+IP + + DTSNFD VD D LRN++
Sbjct: 350 EDFKKHAFFEGLNWEN-IRNLEAPYIPDVSSPSDTSNFD-VDDDVLRNTE 397
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 48/70 (68%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
+++ +T +YAMK L K ++LKR + A + ERD+L D +W+ L+Y+FQD+++LY V
Sbjct: 109 VKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLV 168
Query: 139 MDYIPGEKLI 148
MDY G L+
Sbjct: 169 MDYYVGGDLL 178
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K ++LKR + A + ERD+L D +W+ L+Y+FQ
Sbjct: 120 MKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQ 160
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 443 LKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
+K ++ + F IK IG GAFGEV +V+ +T +YAMK + K
Sbjct: 82 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNK 125
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 192 bits (488), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 125/350 (35%), Positives = 178/350 (50%), Gaps = 71/350 (20%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKC-------VGAF-GEVTLVRKIDTNHLYVMKGS-- 592
G FGEV +V+ +T +Y MK + K F E ++ D + + +
Sbjct: 85 GAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQ 144
Query: 593 PHNNLYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
N+LY VMDY GGDL++LL K + E +ARFYI E+ A++S+H++ ++HRDIKPD
Sbjct: 145 DENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIHQLHYVHRDIKPD 204
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCI 711
N+L+D +GHI+L DFG C + N D Q S+
Sbjct: 205 NVLLDVNGHIRLADFGSCL-----------KMNDDGTVQSSVA----------------- 236
Query: 712 NSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVL--LRTG---YTQLCDWWSVGVILYE 766
VGTP+YI+PE+L + G Y CDWWS+GV +YE
Sbjct: 237 -----------------------VGTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYE 273
Query: 767 MLVGSPPFLANTSAETQYKVINWESCLHIPAE-AQLSPEGADLILQLCTGADKRLGKNAS 825
ML G PF A + ET K++N E P+ +S E DLI +L ++RLG+N
Sbjct: 274 MLYGETPFYAESLVETYGKIMNHEERFQFPSHVTDVSEEAKDLIQRLICSRERRLGQNGI 333
Query: 826 E-VKAHPFFSNVDFEKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLRNSD 874
E K H FF +++E +R L P+IP + + DTSNFD VD D LRN++
Sbjct: 334 EDFKKHAFFEGLNWEN-IRNLEAPYIPDVSSPSDTSNFD-VDDDVLRNTE 381
Score = 71.2 bits (173), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 48/70 (68%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
+++ +T +YAMK L K ++LKR + A + ERD+L D +W+ L+Y+FQD+++LY V
Sbjct: 93 VKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQDENHLYLV 152
Query: 139 MDYIPGEKLI 148
MDY G L+
Sbjct: 153 MDYYVGGDLL 162
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 27/41 (65%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K ++LKR + A + ERD+L D +W+ L+Y+FQ
Sbjct: 104 MKILNKWEMLKRAETACFREERDVLVNGDCQWITALHYAFQ 144
Score = 38.5 bits (88), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%)
Query: 443 LKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
+K ++ + F IK IG GAFGEV +V+ +T +YAMK + K
Sbjct: 66 VKEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNK 109
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 184 bits (467), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 125/359 (34%), Positives = 178/359 (49%), Gaps = 69/359 (19%)
Query: 534 VMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKC-------VGAFGEVTLV------RK 580
++K I + G FGEV +V+ + + ++ MK + K F E V +
Sbjct: 78 ILKVIGR--GAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKW 135
Query: 581 IDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVH 639
I T H Y + NNLY VMDY GGDL++LL K + E +ARFY+AE+ A++SVH
Sbjct: 136 ITTLH-YAFQDD--NNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVH 192
Query: 640 KMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEW 699
++ ++HRDIKPDNIL+D +GHI+L DFG C QS+ G D + P
Sbjct: 193 QLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLM---EDGTVQSSVAVGTPDYISPE--- 246
Query: 700 SQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWS 759
+ ++ G PE CDWWS
Sbjct: 247 ------------------------------ILQAMEGGKGRYGPE----------CDWWS 266
Query: 760 VGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAE-AQLSPEGADLILQLCTGADK 818
+GV +YEML G PF A + ET K++N + P + +S DLI +L +
Sbjct: 267 LGVCMYEMLYGETPFYAESLVETYGKIMNHKERFQFPTQVTDVSENAKDLIRRLICSREH 326
Query: 819 RLGKNASE-VKAHPFFSNVDFEKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLRNSDSM 876
RLG+N E K HPFFS +D++ +R P+IP + + DTSNFD VD D L+NS++M
Sbjct: 327 RLGQNGIEDFKKHPFFSGIDWDN-IRNCEAPYIPEVSSPTDTSNFD-VDDDCLKNSETM 383
Score = 71.6 bits (174), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 48/70 (68%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
++L + + ++AMK L K ++LKR + A + ERD+L D++W+ L+Y+FQD +NLY V
Sbjct: 93 VKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDDNNLYLV 152
Query: 139 MDYIPGEKLI 148
MDY G L+
Sbjct: 153 MDYYVGGDLL 162
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 29/43 (67%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGD 43
MK L K ++LKR + A + ERD+L D++W+ L+Y+FQ D
Sbjct: 104 MKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAFQDD 146
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 16/45 (35%), Positives = 30/45 (66%)
Query: 442 RLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
++K+ ++ + F +K IG GAFGEV +V+ + + ++AMK + K
Sbjct: 65 KVKQMRLHREDFEILKVIGRGAFGEVAVVKLKNADKVFAMKILNK 109
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 181 bits (459), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 120/363 (33%), Positives = 182/363 (50%), Gaps = 78/363 (21%)
Query: 526 KIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKC-VGAFGEVTLVRK---- 580
++ + ++K I + G F EV +V+ T +Y MK + K + GEV+ R+
Sbjct: 57 RLQRDDFEILKVIGR--GAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDV 114
Query: 581 -IDTNHLYVMK----GSPHNNLYFVMDYIPGGDLMSLLIKKG-IFEEPLARFYIAELTCA 634
++ + ++ + N LY VM+Y GGDL++LL K G +ARFY+AE+ A
Sbjct: 115 LVNGDRRWITQLHFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMA 174
Query: 635 VESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSME 694
++SVH++G++HRDIKPDNIL+DR GHI+L DFG C R
Sbjct: 175 IDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLR--------------------- 213
Query: 695 PSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLV--GTPNYIAPEVLLRTGYT 752
+ GT SLV GTP+Y++PE+L G
Sbjct: 214 -----ADGT---------------------------VRSLVAVGTPDYLSPEILQAVGGG 241
Query: 753 QL-------CDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEG 805
CDWW++GV YEM G PF A+++AET K+++++ L +P + PE
Sbjct: 242 PGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVHYKEHLSLPLVDEGVPEE 301
Query: 806 A-DLILQLCTGADKRLGK-NASEVKAHPFFSNVDFEKGVRTLTPPHIPRIQNSMDTSNFD 863
A D I +L + RLG+ A + + HPFF +D++ G+R PP P + + DT NFD
Sbjct: 302 ARDFIQRLLCPPETRLGRGGAGDFRTHPFFFGLDWD-GLRDSVPPFTPDFEGATDTCNFD 360
Query: 864 PVD 866
V+
Sbjct: 361 LVE 363
Score = 70.1 bits (170), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 63 VLKSILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWV 122
+LK I + +EV +++ T +YAMK + K D+LKR +V+ + ERD+L D W+
Sbjct: 65 ILKVIGRGAFSEV-AVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWI 123
Query: 123 VKLYYSFQDKDNLYFVMDYIPGEKLI 148
+L+++FQD++ LY VM+Y G L+
Sbjct: 124 TQLHFAFQDENYLYLVMEYYVGGDLL 149
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
MK + K D+LKR +V+ + ERD+L D W+ +L+++FQ + ++ + MEY +
Sbjct: 91 MKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAFQDENYLYL-----VMEYYVG 145
Query: 61 ARVL 64
+L
Sbjct: 146 GDLL 149
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 45/84 (53%), Gaps = 2/84 (2%)
Query: 418 KIGLSAEAQCQ-MRKMLSQKESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTN 476
++G S AQ + + L E +RLK ++ + F +K IG GAF EV +V+ T
Sbjct: 27 ELGASELAQDKYVADFLQWAEPIVVRLKEVRLQRDDFEILKVIGRGAFSEVAVVKMKQTG 86
Query: 477 HLYAMKTIYKC-VGAFGEVTLVRK 499
+YAMK + K + GEV+ R+
Sbjct: 87 QVYAMKIMNKWDMLKRGEVSCFRE 110
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 178 bits (451), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 114/365 (31%), Positives = 173/365 (47%), Gaps = 69/365 (18%)
Query: 507 VMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIY 566
V+K I + GAFGEV LVR + +Y MK + K ++++ D+ + + I
Sbjct: 79 VVKVIGR--GAFGEVQLVRHKASQKVYAMKLLSK-------FEMIKRSDSAFFWEERDIM 129
Query: 567 KCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARF 626
+ V L + LY VM+Y+PGGDL++L+ + E A+F
Sbjct: 130 AFANSPWVVQLFCAFQDDKY----------LYMVMEYMPGGDLVNLMSNYDV-PEKWAKF 178
Query: 627 YIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGD 686
Y AE+ A++++H MG IHRD+KPDN+L+D+ GH+KL DFG C + +
Sbjct: 179 YTAEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKM---DETGMVHCDTA 235
Query: 687 HGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVL 746
G D + P SQG G
Sbjct: 236 VGTPDYISPEVLKSQGGDGY---------------------------------------- 255
Query: 747 LRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGA 806
Y + CDWWSVGV L+EMLVG PF A++ T K+++ ++ L P +A++S
Sbjct: 256 ----YGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKNSLCFPEDAEISKHAK 311
Query: 807 DLILQLCTGADKRLGKNA-SEVKAHPFFSNVDFE-KGVRTLTPPHIPRIQNSMDTSNFDP 864
+LI T + RLG+N E+K HPFF N + +R P +P + + +D+SNFD
Sbjct: 312 NLICAFLTDREVRLGRNGVEEIKQHPFFKNDQWNWDNIRETAAPVVPELSSDIDSSNFDD 371
Query: 865 VDPDK 869
++ DK
Sbjct: 372 IEDDK 376
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/100 (36%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 49 GLWVNTMEYALAARVLKSILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVK 108
GL + +Y + + + GE +R + +YAMK L K +++KR+ A
Sbjct: 69 GLQMKAEDYDVVKVIGRGAFGEVQL-----VRHKASQKVYAMKLLSKFEMIKRSDSAFFW 123
Query: 109 AERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGEKLI 148
ERDI+A A++ WVV+L+ +FQD LY VM+Y+PG L+
Sbjct: 124 EERDIMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDLV 163
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 5/57 (8%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEY 57
MK L K +++KR+ A ERDI+A A++ WVV+L+ +FQ D ++ + MEY
Sbjct: 105 MKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAFQDDKYLYM-----VMEY 156
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 432 MLSQKESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
L++ E +++ +M + +K IG GAFGEV LVR + +YAMK + K
Sbjct: 56 FLNRYEKIVKKIRGLQMKAEDYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLLSK 110
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 168 bits (426), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 115/356 (32%), Positives = 170/356 (47%), Gaps = 75/356 (21%)
Query: 526 KIDTNHLYVMKTIYKCVGVFGEVTLVRKI---DTNHLYVMKTIYKCVGAFGEVTLVRK-- 580
K D + ++K + + G FG+V LV+KI D LY MK + K + +
Sbjct: 20 KADPSQFELLKVLGQ--GSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER 77
Query: 581 ---IDTNHLYVMK----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTC 633
++ NH +++K LY ++D++ GGDL + L K+ +F E +FY+AEL
Sbjct: 78 DILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL 137
Query: 634 AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSM 693
A++ +H +G I+RD+KP+NIL+D +GHIKLTDFGL + + DH ++
Sbjct: 138 ALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS------------KESIDHEKK--- 182
Query: 694 EPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 753
A+S GT Y+APEV+ R G+TQ
Sbjct: 183 -------------------------------------AYSFCGTVEYMAPEVVNRRGHTQ 205
Query: 754 LCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC 813
DWWS GV+++EML G+ PF ET ++ ++ L +P LSPE L+ L
Sbjct: 206 SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL--KAKLGMP--QFLSPEAQSLLRMLF 261
Query: 814 T-GADKRLGK---NASEVKAHPFFSNVDFEKGV-RTLTPPHIPRIQNSMDTSNFDP 864
RLG E+K H FFS +D+ K R + PP P DT FDP
Sbjct: 262 KRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKPATGRPEDTFYFDP 317
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI 142
D LYAMK L+KA + R++V K ERDIL E ++ ++VKL+Y+FQ + LY ++D++
Sbjct: 50 DARQLYAMKVLKKATLKVRDRV-RTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFL 108
Query: 143 PGEKLI 148
G L
Sbjct: 109 RGGDLF 114
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ--GDIFILV 48
MK L+KA + R++V K ERDIL E ++ ++VKL+Y+FQ G +++++
Sbjct: 57 MKVLKKATLKVRDRV-RTKMERDILVEVNHPFIVKLHYAFQTEGKLYLIL 105
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 438 SNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKI---DTNHLYAMKTIYKCVGAFGEV 494
+++++ K D S F +K +G G+FG+V LV+KI D LYAMK + K +
Sbjct: 11 THHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDR 70
Query: 495 TLVRK-----IDTNHLYVMKTIY 512
+ ++ NH +++K Y
Sbjct: 71 VRTKMERDILVEVNHPFIVKLHY 93
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 168 bits (425), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 181/370 (48%), Gaps = 90/370 (24%)
Query: 516 GAFGEVTLVRKI---DTNHLYVMKTIYKCVGVFGEVTLVRKI-DTNHLYVMKTIYKCVGA 571
G +G+V VRK+ +T ++ MK + K + +VR DT H + I + V
Sbjct: 28 GGYGKVFQVRKVTGANTGKIFAMKVLKKAM-------IVRNAKDTAHTKAERNILEEVKH 80
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
V L+ T LY +++Y+ GG+L L ++GIF E A FY+AE+
Sbjct: 81 PFIVDLIYAFQTG----------GKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEI 130
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
+ A+ +H+ G I+RD+KP+NI+++ GH+KLTDFGL
Sbjct: 131 SMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGL----------------------- 167
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
C S H + H+ GT Y+APE+L+R+G+
Sbjct: 168 ------------------CKES-----------IHDGTVTHTFCGTIEYMAPEILMRSGH 198
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ 811
+ DWWS+G ++Y+ML G+PPF +T K++ + L++P L+ E DL+ +
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK--LNLP--PYLTQEARDLLKK 254
Query: 812 LCT-GADKRLGK---NASEVKAHPFFSNVDFEKGV-RTLTPPHIPRIQNSMDTSNFD--- 863
L A RLG +A EV+AHPFF ++++E+ + R + PP P +Q+ D S FD
Sbjct: 255 LLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKF 314
Query: 864 ----PVD-PD 868
PVD PD
Sbjct: 315 TRQTPVDSPD 324
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 83 DTNHLYAMKTLRKADVLKRNQ-VAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 141
+T ++AMK L+KA +++ + AH KAER+IL E + ++V L Y+FQ LY +++Y
Sbjct: 43 NTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEY 102
Query: 142 IPGEKLI 148
+ G +L
Sbjct: 103 LSGGELF 109
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Query: 1 MKTLRKADVLKRNQ-VAHVKAERDILAEADNEWVVKLYYSFQ--GDIFILV 48
MK L+KA +++ + AH KAER+IL E + ++V L Y+FQ G +++++
Sbjct: 50 MKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLIL 100
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 116/370 (31%), Positives = 180/370 (48%), Gaps = 90/370 (24%)
Query: 516 GAFGEVTLVRKI---DTNHLYVMKTIYKCVGVFGEVTLVRKI-DTNHLYVMKTIYKCVGA 571
G +G+V VRK+ +T ++ MK + K + +VR DT H + I + V
Sbjct: 28 GGYGKVFQVRKVTGANTGKIFAMKVLKKAM-------IVRNAKDTAHTKAERNILEEVKH 80
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
V L+ T LY +++Y+ GG+L L ++GIF E A FY+AE+
Sbjct: 81 PFIVDLIYAFQTG----------GKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEI 130
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
+ A+ +H+ G I+RD+KP+NI+++ GH+KLTDFGL
Sbjct: 131 SMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGL----------------------- 167
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
C S H + H GT Y+APE+L+R+G+
Sbjct: 168 ------------------CKES-----------IHDGTVTHXFCGTIEYMAPEILMRSGH 198
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ 811
+ DWWS+G ++Y+ML G+PPF +T K++ + L++P L+ E DL+ +
Sbjct: 199 NRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKCK--LNLP--PYLTQEARDLLKK 254
Query: 812 LCT-GADKRLGK---NASEVKAHPFFSNVDFEKGV-RTLTPPHIPRIQNSMDTSNFD--- 863
L A RLG +A EV+AHPFF ++++E+ + R + PP P +Q+ D S FD
Sbjct: 255 LLKRNAASRLGAGPGDAGEVQAHPFFRHINWEELLARKVEPPFKPLLQSEEDVSQFDSKF 314
Query: 864 ----PVD-PD 868
PVD PD
Sbjct: 315 TRQTPVDSPD 324
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/67 (38%), Positives = 44/67 (65%), Gaps = 1/67 (1%)
Query: 83 DTNHLYAMKTLRKADVLKRNQ-VAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDY 141
+T ++AMK L+KA +++ + AH KAER+IL E + ++V L Y+FQ LY +++Y
Sbjct: 43 NTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLILEY 102
Query: 142 IPGEKLI 148
+ G +L
Sbjct: 103 LSGGELF 109
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 35/51 (68%), Gaps = 3/51 (5%)
Query: 1 MKTLRKADVLKRNQ-VAHVKAERDILAEADNEWVVKLYYSFQ--GDIFILV 48
MK L+KA +++ + AH KAER+IL E + ++V L Y+FQ G +++++
Sbjct: 50 MKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAFQTGGKLYLIL 100
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 167 bits (423), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 117/355 (32%), Positives = 171/355 (48%), Gaps = 75/355 (21%)
Query: 526 KIDTNHLYVMKTIYKCVGVFGEVTLVRKI---DTNHLYVMKTIYKCVGAFGE---VTLVR 579
K D +H ++K + + G FG+V LVRK+ D+ HLY MK + K + + R
Sbjct: 24 KADPSHFELLKVLGQ--GSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMER 81
Query: 580 KI--DTNHLYVMK----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTC 633
I D NH +V+K LY ++D++ GGDL + L K+ +F E +FY+AEL
Sbjct: 82 DILADVNHPFVVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL 141
Query: 634 AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSM 693
++ +H +G I+RD+KP+NIL+D +GHIKLTDFGL + DH ++
Sbjct: 142 GLDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS------------KEAIDHEKK--- 186
Query: 694 EPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 753
A+S GT Y+APEV+ R G++
Sbjct: 187 -------------------------------------AYSFCGTVEYMAPEVVNRQGHSH 209
Query: 754 LCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC 813
DWWS GV+++EML GS PF ET ++ ++ L +P LS E L+ L
Sbjct: 210 SADWWSYGVLMFEMLTGSLPFQGKDRKETMTLIL--KAKLGMP--QFLSTEAQSLLRALF 265
Query: 814 T-GADKRLGK---NASEVKAHPFFSNVDFEKGV-RTLTPPHIPRIQNSMDTSNFD 863
RLG A E+K H F+S +D+ K R + PP P + DT FD
Sbjct: 266 KRNPANRLGSGPDGAEEIKRHVFYSTIDWNKLYRREIKPPFKPAVAQPDDTFYFD 320
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%), Gaps = 1/66 (1%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI 142
D+ HLYAMK L+KA + R++V K ERDILA+ ++ +VVKL+Y+FQ + LY ++D++
Sbjct: 54 DSGHLYAMKVLKKATLKVRDRV-RTKMERDILADVNHPFVVKLHYAFQTEGKLYLILDFL 112
Query: 143 PGEKLI 148
G L
Sbjct: 113 RGGDLF 118
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 46/83 (55%), Gaps = 8/83 (9%)
Query: 438 SNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKI---DTNHLYAMKTIYKCVGAFGE- 493
+++++ K D S F +K +G G+FG+V LVRK+ D+ HLYAMK + K +
Sbjct: 15 THHVKAGSEKADPSHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDR 74
Query: 494 --VTLVRKI--DTNHLYVMKTIY 512
+ R I D NH +V+K Y
Sbjct: 75 VRTKMERDILADVNHPFVVKLHY 97
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 37/50 (74%), Gaps = 3/50 (6%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ--GDIFILV 48
MK L+KA + R++V K ERDILA+ ++ +VVKL+Y+FQ G +++++
Sbjct: 61 MKVLKKATLKVRDRV-RTKMERDILADVNHPFVVKLHYAFQTEGKLYLIL 109
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 165/343 (48%), Gaps = 75/343 (21%)
Query: 526 KIDTNHLYVMKTIYKCVGVFGEVTLVRKI---DTNHLYVMKTIYKCVGAFGEVTLVRK-- 580
K D + ++K + + G FG+V LV+KI D LY MK + K + +
Sbjct: 20 KADPSQFELLKVLGQ--GSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER 77
Query: 581 ---IDTNHLYVMK----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTC 633
++ NH +++K LY ++D++ GGDL + L K+ +F E +FY+AEL
Sbjct: 78 DILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL 137
Query: 634 AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSM 693
A++ +H +G I+RD+KP+NIL+D +GHIKLTDFGL + + DH ++
Sbjct: 138 ALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS------------KESIDHEKK--- 182
Query: 694 EPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 753
A+S GT Y+APEV+ R G+TQ
Sbjct: 183 -------------------------------------AYSFCGTVEYMAPEVVNRRGHTQ 205
Query: 754 LCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC 813
DWWS GV+++EML G+ PF ET ++ ++ L +P LSPE L+ L
Sbjct: 206 SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL--KAKLGMP--QFLSPEAQSLLRMLF 261
Query: 814 T-GADKRLGK---NASEVKAHPFFSNVDFEKGV-RTLTPPHIP 851
RLG E+K H FFS +D+ K R + PP P
Sbjct: 262 KRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP 304
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI 142
D LYAMK L+KA + R++V K ERDIL E ++ ++VKL+Y+FQ + LY ++D++
Sbjct: 50 DARQLYAMKVLKKATLKVRDRV-RTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFL 108
Query: 143 PGEKLI 148
G L
Sbjct: 109 RGGDLF 114
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ--GDIFILV 48
MK L+KA + R++V K ERDIL E ++ ++VKL+Y+FQ G +++++
Sbjct: 57 MKVLKKATLKVRDRV-RTKMERDILVEVNHPFIVKLHYAFQTEGKLYLIL 105
Score = 39.3 bits (90), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 438 SNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKI---DTNHLYAMKTIYKCVGAFGEV 494
+++++ K D S F +K +G G+FG+V LV+KI D LYAMK + K +
Sbjct: 11 THHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDR 70
Query: 495 TLVRK-----IDTNHLYVMKTIY 512
+ ++ NH +++K Y
Sbjct: 71 VRTKMERDILVEVNHPFIVKLHY 93
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 160 bits (405), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 110/343 (32%), Positives = 165/343 (48%), Gaps = 75/343 (21%)
Query: 526 KIDTNHLYVMKTIYKCVGVFGEVTLVRKI---DTNHLYVMKTIYKCVGAFGEVTLVRK-- 580
K D + ++K + + G FG+V LV+KI D LY MK + K + +
Sbjct: 21 KADPSQFELLKVLGQ--GSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMER 78
Query: 581 ---IDTNHLYVMK----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTC 633
++ NH +++K LY ++D++ GGDL + L K+ +F E +FY+AEL
Sbjct: 79 DILVEVNHPFIVKLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELAL 138
Query: 634 AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSM 693
A++ +H +G I+RD+KP+NIL+D +GHIKLTDFGL + + DH ++
Sbjct: 139 ALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLS------------KESIDHEKK--- 183
Query: 694 EPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 753
A+S GT Y+APEV+ R G+TQ
Sbjct: 184 -------------------------------------AYSFCGTVEYMAPEVVNRRGHTQ 206
Query: 754 LCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC 813
DWWS GV+++EML G+ PF ET ++ ++ L +P LSPE L+ L
Sbjct: 207 SADWWSFGVLMFEMLTGTLPFQGKDRKETMTMIL--KAKLGMP--QFLSPEAQSLLRMLF 262
Query: 814 T-GADKRLGK---NASEVKAHPFFSNVDFEKGV-RTLTPPHIP 851
RLG E+K H FFS +D+ K R + PP P
Sbjct: 263 KRNPANRLGAGPDGVEEIKRHSFFSTIDWNKLYRREIHPPFKP 305
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI 142
D LYAMK L+KA + R++V K ERDIL E ++ ++VKL+Y+FQ + LY ++D++
Sbjct: 51 DARQLYAMKVLKKATLKVRDRV-RTKMERDILVEVNHPFIVKLHYAFQTEGKLYLILDFL 109
Query: 143 PGEKLI 148
G L
Sbjct: 110 RGGDLF 115
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 36/50 (72%), Gaps = 3/50 (6%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ--GDIFILV 48
MK L+KA + R++V K ERDIL E ++ ++VKL+Y+FQ G +++++
Sbjct: 58 MKVLKKATLKVRDRV-RTKMERDILVEVNHPFIVKLHYAFQTEGKLYLIL 106
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 43/83 (51%), Gaps = 8/83 (9%)
Query: 438 SNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKI---DTNHLYAMKTIYKCVGAFGEV 494
+++++ K D S F +K +G G+FG+V LV+KI D LYAMK + K +
Sbjct: 12 THHVKEGHEKADPSQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDR 71
Query: 495 TLVRK-----IDTNHLYVMKTIY 512
+ ++ NH +++K Y
Sbjct: 72 VRTKMERDILVEVNHPFIVKLHY 94
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 152 bits (384), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 108/370 (29%), Positives = 167/370 (45%), Gaps = 90/370 (24%)
Query: 505 LYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKT 564
+ +K I K G+FG+V L R + + ++ V V + +++K + H+ +
Sbjct: 40 FHFLKVIGK--GSFGKVLLAR-------HKAEEVFYAVKVLQKKAILKKKEEKHIMSERN 90
Query: 565 IYKCVGAFGEVTLVRKIDTNHLYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEP 622
+ L++ + L + S + LYFV+DYI GG+L L ++ F EP
Sbjct: 91 V-----------LLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRERCFLEP 139
Query: 623 LARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQ 682
ARFY AE+ A+ +H + ++RD+KP+NIL+D GHI LTDFGLC +
Sbjct: 140 RARFYAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLC------------K 187
Query: 683 SNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIA 742
N +H S + GTP Y+A
Sbjct: 188 ENIEHNSTTS----------------------------------------TFCGTPEYLA 207
Query: 743 PEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLS 802
PEVL + Y + DWW +G +LYEML G PPF + +AE ++N QL
Sbjct: 208 PEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN--------KPLQLK 259
Query: 803 PEGADLILQLCTGA-----DKRLGK--NASEVKAHPFFSNVDFEKGV-RTLTPPHIPRIQ 854
P + L G KRLG + E+K+H FFS ++++ + + +TPP P +
Sbjct: 260 PNITNSARHLLEGLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPFNPNVS 319
Query: 855 NSMDTSNFDP 864
D +FDP
Sbjct: 320 GPNDLRHFDP 329
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 87 LYAMKTLRKADVLKRNQVAHVKAERDILAE-ADNEWVVKLYYSFQDKDNLYFVMDYIPGE 145
YA+K L+K +LK+ + H+ +ER++L + + ++V L++SFQ D LYFV+DYI G
Sbjct: 65 FYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGG 124
Query: 146 KLI 148
+L
Sbjct: 125 ELF 127
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 35/58 (60%), Gaps = 2/58 (3%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAE-ADNEWVVKLYYSFQ-GDIFILVGLWVNTME 56
+K L+K +LK+ + H+ +ER++L + + ++V L++SFQ D V ++N E
Sbjct: 68 VKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSFQTADKLYFVLDYINGGE 125
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 163/345 (47%), Gaps = 74/345 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++ + Y MK + K E +++ ++ L ++ S
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+ GG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCI 711
N+LID+ G+I++TDFG + GR + GTP
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK--------------GRTWXL-------XGTP------- 202
Query: 712 NSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGS 771
Y+APE++L GY + DWW++GV++YEM G
Sbjct: 203 ---------------------------EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 772 PPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SEV 827
PPF A+ + K+++ + P + S + DL+ L KR G KN +++
Sbjct: 236 PPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 828 KAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 85 NHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 144
NH YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y+ G
Sbjct: 67 NH-YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 145 EKLI 148
++
Sbjct: 126 GEMF 129
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 446 AKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
A++D+ F +IK +G G+FG V LV+ ++ + YAMK + K
Sbjct: 38 AQLDQ--FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 148 bits (373), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 163/345 (47%), Gaps = 74/345 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++ + Y MK + K E +++ ++ L ++ S
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+ GG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCI 711
N+LID+ G+I++TDFG + GR + GTP
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK--------------GRTWXL-------AGTP------- 202
Query: 712 NSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGS 771
Y+APE++L GY + DWW++GV++YEM G
Sbjct: 203 ---------------------------EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGY 235
Query: 772 PPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SEV 827
PPF A+ + K+++ + P + S + DL+ L KR G KN +++
Sbjct: 236 PPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 291
Query: 828 KAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 292 KNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 85 NHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 144
NH YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y+ G
Sbjct: 67 NH-YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 145 EKLI 148
++
Sbjct: 126 GEMF 129
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 446 AKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
A++D+ F +IK +G G+FG V LV+ ++ + YAMK + K
Sbjct: 38 AQLDQ--FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Score = 30.4 bits (67), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 144 bits (362), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 106/356 (29%), Positives = 155/356 (43%), Gaps = 78/356 (21%)
Query: 524 VRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDT 583
V+ D N L V+ G FG+V L + T LY +K + K V + ++
Sbjct: 16 VKLTDFNFLMVLGK-----GSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEK 70
Query: 584 NHLYVMKGSPH-----------NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELT 632
L ++ P + LYFVM+Y+ GGDLM + + G F+EP A FY AE++
Sbjct: 71 RVLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEIS 130
Query: 633 CAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDS 692
+ +HK G I+RD+K DN+++D +GHIK+ DFG+C
Sbjct: 131 IGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMC----------------------- 167
Query: 693 MEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYT 752
E G +E GTP+YIAPE++ Y
Sbjct: 168 ---KEHMMDGVTTRE--------------------------FCGTPDYIAPEIIAYQPYG 198
Query: 753 QLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQL 812
+ DWW+ GV+LYEML G PPF E ++ ++ LS E + L
Sbjct: 199 KSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIMEH----NVSYPKSLSKEAVSICKGL 254
Query: 813 CTG-ADKRLG---KNASEVKAHPFFSNVDFEK-GVRTLTPPHIPRIQNSMDTSNFD 863
T KRLG + +V+ H FF +D+EK R + PP P++ NFD
Sbjct: 255 MTKHPAKRLGCGPEGERDVREHAFFRRIDWEKLENREIQPPFKPKVCGK-GAENFD 309
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNE-WVVKLYYSFQDKDNLYFVMDYI 142
T LYA+K L+K V++ + V E+ +LA D ++ +L+ FQ D LYFVM+Y+
Sbjct: 43 TEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLHSCFQTVDRLYFVMEYV 102
Query: 143 PGEKLI 148
G L+
Sbjct: 103 NGGDLM 108
Score = 30.4 bits (67), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 443 LKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV 488
L R K+ F+ + +G G+FG+V L + T LYA+K + K V
Sbjct: 13 LDRVKLTDFNFLMV--LGKGSFGKVMLADRKGTEELYAIKILKKDV 56
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 141 bits (355), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 160/353 (45%), Gaps = 95/353 (26%)
Query: 543 GVFGEVTLVRKI---DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNH--------LYVMKG 591
G +G+V LVRKI DT LY MK + K T+V+K T L ++
Sbjct: 65 GAYGKVFLVRKISGHDTGKLYAMKVLKKA-------TIVQKAKTTEHTRTERQVLEHIRQ 117
Query: 592 SP-----------HNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHK 640
SP L+ ++DYI GG+L + L ++ F E + Y+ E+ A+E +HK
Sbjct: 118 SPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEVQIYVGEIVLALEHLHK 177
Query: 641 MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWS 700
+G I+RDIK +NIL+D +GH+ LTDFGL F + Y
Sbjct: 178 LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAY------------------- 218
Query: 701 QGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL--RTGYTQLCDWW 758
GT Y+AP+++ +G+ + DWW
Sbjct: 219 --------------------------------DFCGTIEYMAPDIVRGGDSGHDKAVDWW 246
Query: 759 SVGVILYEMLVGSPPFLA----NTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT 814
S+GV++YE+L G+ PF N+ AE +++ E P ++S DLI +L
Sbjct: 247 SLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEP----PYPQEMSALAKDLIQRLLM 302
Query: 815 -GADKRLG---KNASEVKAHPFFSNVDFEK-GVRTLTPPHIPRIQNSMDTSNF 862
KRLG ++A E+K H FF ++++ + + P P I++ +D SNF
Sbjct: 303 KDPKKRLGCGPRDADEIKEHLFFQKINWDDLAAKKVPAPFKPVIRDELDVSNF 355
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVA-HVKAERDILAEA-DNEWVVKLYYSFQDKDNLYFVMD 140
DT LYAMK L+KA ++++ + H + ER +L + ++V L+Y+FQ + L+ ++D
Sbjct: 80 DTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQTETKLHLILD 139
Query: 141 YIPGEKLI 148
YI G +L
Sbjct: 140 YINGGELF 147
Score = 37.4 bits (85), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 10/54 (18%)
Query: 453 FIKIKPIGVGAFGEVTLVRKI---DTNHLYAMKTIYKCVGAFGEVTLVRKIDTN 503
F +K +G GA+G+V LVRKI DT LYAMK + K T+V+K T
Sbjct: 56 FELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKA-------TIVQKAKTT 102
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 100/348 (28%), Positives = 163/348 (46%), Gaps = 76/348 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++T + Y MK + K E +++ ++ L ++ S
Sbjct: 52 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 111
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+PGG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 112 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W+ GTP
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WTLCGTP------ 203
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 204 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 235
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 236 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLRNS 873
+K H +F+ D+ R + P IP+ + DTSNFD + +++R S
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVS 339
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
++ ++T + YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY V
Sbjct: 61 VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 120
Query: 139 MDYIPGEKLI 148
M+Y+PG ++
Sbjct: 121 MEYVPGGEMF 130
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ ++T + YAMK + K
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK 77
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 164/353 (46%), Gaps = 78/353 (22%)
Query: 535 MKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHL 586
+KTI G FG V LV+ ++T + Y MK + K E +++ ++ L
Sbjct: 46 IKTI--GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 103
Query: 587 YVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFI 644
++ S ++NLY VM+Y+PGGD+ S L + G F EP ARFY A++ E +H + I
Sbjct: 104 VKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 645 HRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GT 703
+RD+KP+N+LID+ G+IK+ DFG + GR W GT
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVK--------------GRT--------WXLCGT 201
Query: 704 PGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 763
P LA ++ + Y + DWW++GV+
Sbjct: 202 P-----------------------EYLAPEIILSKGY-----------NKAVDWWALGVL 227
Query: 764 LYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG- 821
+YEM G PPF A+ + K+++ + P + S + DL+ L KR G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 822 -KNA-SEVKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
KN +++K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
++ ++T + YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY V
Sbjct: 60 VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 139 MDYIPG 144
M+Y+PG
Sbjct: 120 MEYMPG 125
Score = 37.4 bits (85), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK IG G+FG V LV+ ++T + YAMK + K
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDK 76
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 137 bits (344), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 103/353 (29%), Positives = 164/353 (46%), Gaps = 78/353 (22%)
Query: 535 MKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHL 586
+KTI G FG V LV+ ++T + Y MK + K E +++ ++ L
Sbjct: 46 IKTI--GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 103
Query: 587 YVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFI 644
++ S ++NLY VM+Y+PGGD+ S L + G F EP ARFY A++ E +H + I
Sbjct: 104 VKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 645 HRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GT 703
+RD+KP+N+LID+ G+IK+ DFG + GR W GT
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVK--------------GRT--------WXLCGT 201
Query: 704 PGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 763
P LA ++ + Y + DWW++GV+
Sbjct: 202 P-----------------------EYLAPEIILSKGY-----------NKAVDWWALGVL 227
Query: 764 LYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG- 821
+YEM G PPF A+ + K+++ + P + S + DL+ L KR G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 822 -KNA-SEVKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
KN +++K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
++ ++T + YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY V
Sbjct: 60 VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 139 MDYIPG 144
M+Y+PG
Sbjct: 120 MEYMPG 125
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK IG G+FG V LV+ ++T + YAMK + K
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDK 76
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 136 bits (343), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 161/346 (46%), Gaps = 80/346 (23%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK-CVGAFGEVTLVR------KIDTNHLYVMK----G 591
G + +V LVR T+ +Y M+ + K V ++ V+ + +NH +++
Sbjct: 63 GSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF 122
Query: 592 SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
+ L+FV++Y+ GGDLM + ++ E ARFY AE++ A+ +H+ G I+RD+K D
Sbjct: 123 QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLD 182
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCI 711
N+L+D +GHIKLTD+G+C ++ + P + S
Sbjct: 183 NVLLDSEGHIKLTDYGMC--------------------KEGLRPGDTTS----------- 211
Query: 712 NSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGS 771
+ GTPNYIAPE+L Y DWW++GV+++EM+ G
Sbjct: 212 ---------------------TFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 250
Query: 772 PPFLANTSAETQ--------YKVINWESCLHIPAEAQLSPEGADLILQLCTGADK-RLG- 821
PF S++ ++VI E + IP LS + A ++ K RLG
Sbjct: 251 SPFDIVGSSDNPDQNTEDYLFQVI-LEKQIRIP--RSLSVKAASVLKSFLNKDPKERLGC 307
Query: 822 ---KNASEVKAHPFFSNVDFE-KGVRTLTPPHIPRIQNSMDTSNFD 863
++++ HPFF NVD++ + + PP P I NFD
Sbjct: 308 HPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 353
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNE-WVVKLYYSFQDKDNLYF 137
+RL T+ +YAM+ ++K V + V+ E+ + +A N ++V L+ FQ + L+F
Sbjct: 71 VRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 130
Query: 138 VMDYIPGEKLI 148
V++Y+ G L+
Sbjct: 131 VIEYVNGGDLM 141
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 160/346 (46%), Gaps = 80/346 (23%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK-CVGAFGEVTLVR------KIDTNHLYVMK----G 591
G + +V LVR T+ +Y MK + K V ++ V+ + +NH +++
Sbjct: 31 GSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF 90
Query: 592 SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
+ L+FV++Y+ GGDLM + ++ E ARFY AE++ A+ +H+ G I+RD+K D
Sbjct: 91 QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLD 150
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCI 711
N+L+D +GHIKLTD+G+C ++ + P + S
Sbjct: 151 NVLLDSEGHIKLTDYGMC--------------------KEGLRPGDTTS----------- 179
Query: 712 NSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGS 771
GTPNYIAPE+L Y DWW++GV+++EM+ G
Sbjct: 180 ---------------------XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 218
Query: 772 PPFLANTSAETQ--------YKVINWESCLHIPAEAQLSPEGADLILQLCTGADK-RLG- 821
PF S++ ++VI E + IP +S + A ++ K RLG
Sbjct: 219 SPFDIVGSSDNPDQNTEDYLFQVI-LEKQIRIP--RSMSVKAASVLKSFLNKDPKERLGC 275
Query: 822 ---KNASEVKAHPFFSNVDFE-KGVRTLTPPHIPRIQNSMDTSNFD 863
++++ HPFF NVD++ + + PP P I NFD
Sbjct: 276 LPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 321
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNE-WVVKLYYSFQDKDNLYF 137
+RL T+ +YAMK ++K V + V+ E+ + +A N ++V L+ FQ + L+F
Sbjct: 39 VRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 98
Query: 138 VMDYIPGEKLI 148
V++Y+ G L+
Sbjct: 99 VIEYVNGGDLM 109
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F ++ IG G++ +V LVR T+ +YAMK + K
Sbjct: 22 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKK 55
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 163/363 (44%), Gaps = 83/363 (22%)
Query: 515 VGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGE 574
G+FG V LV+ ++T + Y MK + K +V+ + H K I + V
Sbjct: 51 TGSFGRVMLVKHMETGNHYAMKILDKQ-------KVVKLKEIEHTLNEKRILQAVNFPFL 103
Query: 575 VTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCA 634
V L N +NLY VM+Y PGG++ S L + G F EP ARFY A++
Sbjct: 104 VKLEFSFKDN----------SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 635 VESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSME 694
E +H + I+RD+KP+N++ID+ G+IK+TDFGL + GR
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK--------------GRT---- 195
Query: 695 PSEEWSQ-GTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 753
W GTP LA ++ + Y +
Sbjct: 196 ----WXLCGTP-----------------------EYLAPEIILSKGY-----------NK 217
Query: 754 LCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC 813
DWW++GV++YEM G PPF A+ + K+++ + P + S + DL+ L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLL 273
Query: 814 -TGADKRLG--KNA-SEVKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPD 868
KR G KN +++K H +F+ D+ R + P IP+ + DTSNFD + +
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333
Query: 869 KLR 871
++R
Sbjct: 334 EIR 336
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
++ ++T + YAMK L K V+K ++ H E+ IL + ++VKL +SF+D NLY V
Sbjct: 60 VKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 139 MDYIPGEKLI 148
M+Y PG ++
Sbjct: 120 MEYAPGGEMF 129
Score = 36.2 bits (82), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ ++T + YAMK + K
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK 76
Score = 29.6 bits (65), Expect = 7.3, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
MK L K V+K ++ H E+ IL + ++VKL +SF+ + + + MEYA
Sbjct: 71 MKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-----VMEYAPG 125
Query: 61 ARVLKSI 67
+ +
Sbjct: 126 GEMFSHL 132
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 160/346 (46%), Gaps = 80/346 (23%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK-CVGAFGEVTLVR------KIDTNHLYVMK----G 591
G + +V LVR T+ +Y MK + K V ++ V+ + +NH +++
Sbjct: 16 GSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF 75
Query: 592 SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
+ L+FV++Y+ GGDLM + ++ E ARFY AE++ A+ +H+ G I+RD+K D
Sbjct: 76 QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLD 135
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCI 711
N+L+D +GHIKLTD+G+C ++ + P + S
Sbjct: 136 NVLLDSEGHIKLTDYGMC--------------------KEGLRPGDTTS----------- 164
Query: 712 NSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGS 771
GTPNYIAPE+L Y DWW++GV+++EM+ G
Sbjct: 165 ---------------------XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 203
Query: 772 PPFLANTSAETQ--------YKVINWESCLHIPAEAQLSPEGADLILQLCTGADK-RLG- 821
PF S++ ++VI E + IP LS + A ++ K RLG
Sbjct: 204 SPFDIVGSSDNPDQNTEDYLFQVI-LEKQIRIP--RSLSVKAASVLKSFLNKDPKERLGC 260
Query: 822 ---KNASEVKAHPFFSNVDFE-KGVRTLTPPHIPRIQNSMDTSNFD 863
++++ HPFF NVD++ + + PP P I NFD
Sbjct: 261 HPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 306
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNE-WVVKLYYSFQDKDNLYF 137
+RL T+ +YAMK ++K V + V+ E+ + +A N ++V L+ FQ + L+F
Sbjct: 24 VRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 83
Query: 138 VMDYIPGEKLI 148
V++Y+ G L+
Sbjct: 84 VIEYVNGGDLM 94
Score = 30.0 bits (66), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F ++ IG G++ +V LVR T+ +YAMK + K
Sbjct: 7 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKK 40
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 136 bits (342), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 98/347 (28%), Positives = 161/347 (46%), Gaps = 76/347 (21%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS-- 592
G FG V LV+ ++T + Y MK + K E +++ ++ L ++ S
Sbjct: 38 GSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 97
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
++NLY VM+Y+PGG++ S L + G F EP ARFY A++ E +H + I+RD+KP+N
Sbjct: 98 DNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 157
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRCI 711
+LID+ G+I++TDFG + GR W+ GTP
Sbjct: 158 LLIDQQGYIQVTDFGFAKRVK--------------GRT--------WTLCGTP------- 188
Query: 712 NSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGS 771
LA ++ + Y + DWW++GV++YEM G
Sbjct: 189 ----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAGY 221
Query: 772 PPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLGK---NASEV 827
PPF A+ + K+++ + P + S + DL+ L KR G +++
Sbjct: 222 PPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKDGVNDI 277
Query: 828 KAHPFFSNVDFEKGV-RTLTPPHIPRIQNSMDTSNFDPVDPDKLRNS 873
K H +F+ D+ R + P IP+ + DTSNFD + +++R S
Sbjct: 278 KNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVS 324
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
++ ++T + YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY V
Sbjct: 46 VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 105
Query: 139 MDYIPGEKLI 148
M+Y+PG ++
Sbjct: 106 MEYVPGGEMF 115
Score = 36.2 bits (82), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ ++T + YAMK + K
Sbjct: 29 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK 62
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 57 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 97
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 161/346 (46%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++T + Y MK + K E +++ ++ L ++ S
Sbjct: 52 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 111
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+PGG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 112 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 203
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 204 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 235
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 236 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 337
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
++ ++T + YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY V
Sbjct: 61 VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 120
Query: 139 MDYIPGEKLI 148
M+Y+PG ++
Sbjct: 121 MEYVPGGEMF 130
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ ++T + YAMK + K
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK 77
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 102/353 (28%), Positives = 164/353 (46%), Gaps = 78/353 (22%)
Query: 535 MKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHL 586
+KTI G FG V LV+ ++T + Y MK + K E +++ ++ L
Sbjct: 46 IKTI--GTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFL 103
Query: 587 YVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFI 644
++ S ++NLY VM+Y+PGG++ S L + G F EP ARFY A++ E +H + I
Sbjct: 104 VKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLI 163
Query: 645 HRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GT 703
+RD+KP+N+LID+ G+IK+ DFG + GR W GT
Sbjct: 164 YRDLKPENLLIDQQGYIKVADFGFAKRVK--------------GRT--------WXLCGT 201
Query: 704 PGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 763
P LA ++ + Y + DWW++GV+
Sbjct: 202 P-----------------------EYLAPEIILSKGY-----------NKAVDWWALGVL 227
Query: 764 LYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG- 821
+YEM G PPF A+ + K+++ + P + S + DL+ L KR G
Sbjct: 228 IYEMAAGYPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGN 283
Query: 822 -KNA-SEVKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
KN +++K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 284 LKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
++ ++T + YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY V
Sbjct: 60 VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 139 MDYIPGEKLI 148
M+Y+PG ++
Sbjct: 120 MEYVPGGEMF 129
Score = 37.4 bits (85), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/34 (50%), Positives = 24/34 (70%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK IG G+FG V LV+ ++T + YAMK + K
Sbjct: 43 FERIKTIGTGSFGRVMLVKHMETGNHYAMKILDK 76
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 161/346 (46%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++T + Y MK + K E +++ ++ L ++ S
Sbjct: 51 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+PGG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 111 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 202
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 203 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 234
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 235 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
++ ++T + YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY V
Sbjct: 60 VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 139 MDYIPGEKLI 148
M+Y+PG ++
Sbjct: 120 MEYVPGGEMF 129
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ ++T + YAMK + K
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK 76
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 135 bits (341), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 100/346 (28%), Positives = 160/346 (46%), Gaps = 80/346 (23%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK-CVGAFGEVTLVR------KIDTNHLYVMK----G 591
G + +V LVR T+ +Y MK + K V ++ V+ + +NH +++
Sbjct: 20 GSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF 79
Query: 592 SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
+ L+FV++Y+ GGDLM + ++ E ARFY AE++ A+ +H+ G I+RD+K D
Sbjct: 80 QTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYLHERGIIYRDLKLD 139
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCI 711
N+L+D +GHIKLTD+G+C ++ + P + S
Sbjct: 140 NVLLDSEGHIKLTDYGMC--------------------KEGLRPGDTTS----------- 168
Query: 712 NSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGS 771
GTPNYIAPE+L Y DWW++GV+++EM+ G
Sbjct: 169 ---------------------XFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGR 207
Query: 772 PPFLANTSAETQ--------YKVINWESCLHIPAEAQLSPEGADLILQLCTGADK-RLG- 821
PF S++ ++VI E + IP LS + A ++ K RLG
Sbjct: 208 SPFDIVGSSDNPDQNTEDYLFQVI-LEKQIRIP--RSLSVKAASVLKSFLNKDPKERLGC 264
Query: 822 ---KNASEVKAHPFFSNVDFE-KGVRTLTPPHIPRIQNSMDTSNFD 863
++++ HPFF NVD++ + + PP P I NFD
Sbjct: 265 HPQTGFADIQGHPFFRNVDWDMMEQKQVVPPFKPNISGEFGLDNFD 310
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNE-WVVKLYYSFQDKDNLYF 137
+RL T+ +YAMK ++K V + V+ E+ + +A N ++V L+ FQ + L+F
Sbjct: 28 VRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCFQTESRLFF 87
Query: 138 VMDYIPGEKLI 148
V++Y+ G L+
Sbjct: 88 VIEYVNGGDLM 98
Score = 30.0 bits (66), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F ++ IG G++ +V LVR T+ +YAMK + K
Sbjct: 11 FDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKK 44
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 135 bits (340), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 161/346 (46%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++T + Y MK + K E +++ ++ L ++ S
Sbjct: 52 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 111
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+PGG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 112 KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 203
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 204 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 235
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 236 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 337
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
++ ++T + YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY V
Sbjct: 61 VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 120
Query: 139 MDYIPGEKLI 148
M+Y+PG ++
Sbjct: 121 MEYVPGGEMF 130
Score = 36.2 bits (82), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ ++T + YAMK + K
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK 77
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 161/346 (46%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++T + Y MK + K E +++ ++ L ++ S
Sbjct: 51 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+PGG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 111 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 202
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 203 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 234
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 235 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
++ ++T + YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY V
Sbjct: 60 VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 139 MDYIPGEKLI 148
M+Y+PG ++
Sbjct: 120 MEYVPGGEMF 129
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ ++T + YAMK + K
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK 76
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 160/346 (46%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++ + Y MK + K E +++ ++ L ++ S
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+ GG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 202
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ L GY + DWW++GV++YEM G
Sbjct: 203 -----------------EALAPEII-----------LSKGYNKAVDWWALGVLIYEMAAG 234
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 235 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 85 NHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 144
NH YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y+ G
Sbjct: 67 NH-YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 145 EKLI 148
++
Sbjct: 126 GEMF 129
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 446 AKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
A++D+ F +IK +G G+FG V LV+ ++ + YAMK + K
Sbjct: 38 AQLDQ--FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 161/346 (46%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++T + Y MK + K E +++ ++ L ++ S
Sbjct: 51 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+PGG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 111 KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 202
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 203 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 234
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 235 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
++ ++T + YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY V
Sbjct: 60 VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 139 MDYIPGEKLI 148
M+Y+PG ++
Sbjct: 120 MEYVPGGEMF 129
Score = 36.2 bits (82), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ ++T + YAMK + K
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK 76
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 161/346 (46%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++T + Y MK + K E +++ ++ L ++ S
Sbjct: 51 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+PGG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 111 KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 202
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 203 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 234
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 235 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
++ ++T + YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY V
Sbjct: 60 VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 139 MDYIPGEKLI 148
M+Y+PG ++
Sbjct: 120 MEYVPGGEMF 129
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ ++T + YAMK + K
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK 76
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 159/346 (45%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++T + Y MK + K E +++ ++ L ++ S
Sbjct: 51 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+PGG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 111 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 202
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 203 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 234
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLGK---NASE 826
PPF A+ + K+++ + P + S + DL+ L KR G ++
Sbjct: 235 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKDGVND 290
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 45/70 (64%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
++ ++T + YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY V
Sbjct: 60 VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 139 MDYIPGEKLI 148
M+Y+PG ++
Sbjct: 120 MEYVPGGEMF 129
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ ++T + YAMK + K
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK 76
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 104/363 (28%), Positives = 163/363 (44%), Gaps = 83/363 (22%)
Query: 515 VGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGE 574
G+FG V LV+ ++T + Y MK + K +V+ + H K I + V
Sbjct: 51 TGSFGRVMLVKHMETGNHYAMKILDKQ-------KVVKLKEIEHTLNEKRILQAVNFPFL 103
Query: 575 VTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCA 634
V L N +NLY VM+Y PGG++ S L + G F EP ARFY A++
Sbjct: 104 VKLEFSFKDN----------SNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 635 VESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSME 694
E +H + I+RD+KP+N++ID+ G+I++TDFGL + GR
Sbjct: 154 FEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK--------------GRT---- 195
Query: 695 PSEEWSQ-GTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 753
W GTP LA ++ + Y +
Sbjct: 196 ----WXLCGTP-----------------------EYLAPEIILSKGY-----------NK 217
Query: 754 LCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC 813
DWW++GV++YEM G PPF A+ + K+++ + P + S + DL+ L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLL 273
Query: 814 -TGADKRLG--KNA-SEVKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPD 868
KR G KN +++K H +F+ D+ R + P IP+ + DTSNFD + +
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333
Query: 869 KLR 871
++R
Sbjct: 334 EIR 336
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
++ ++T + YAMK L K V+K ++ H E+ IL + ++VKL +SF+D NLY V
Sbjct: 60 VKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 139 MDYIPGEKLI 148
M+Y PG ++
Sbjct: 120 MEYAPGGEMF 129
Score = 36.2 bits (82), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ ++T + YAMK + K
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK 76
Score = 29.6 bits (65), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
MK L K V+K ++ H E+ IL + ++VKL +SF+ + + + MEYA
Sbjct: 71 MKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-----VMEYAPG 125
Query: 61 ARVLKSI 67
+ +
Sbjct: 126 GEMFSHL 132
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 160/346 (46%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++T + Y MK + K E +++ ++ L ++ S
Sbjct: 51 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y PGG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 111 KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N++ID+ G+IK+TDFG + GR W GTP
Sbjct: 171 NLMIDQQGYIKVTDFGFAKRVK--------------GRT--------WXLCGTP------ 202
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 203 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 234
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 235 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
++ ++T + YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY V
Sbjct: 60 VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 139 MDYIPGEKLI 148
M+Y PG ++
Sbjct: 120 MEYAPGGEMF 129
Score = 36.2 bits (82), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ ++T + YAMK + K
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK 76
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
MK L K V+K Q+ H E+ IL + ++VKL +SF+ + + + MEYA
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-----VMEYAPG 125
Query: 61 ARVLKSI 67
+ +
Sbjct: 126 GEMFSHL 132
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 160/346 (46%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++T + Y MK + K E +++ ++ L ++ S
Sbjct: 52 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSF 111
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y PGG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 112 KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N++ID+ G+IK+TDFG + GR W GTP
Sbjct: 172 NLMIDQQGYIKVTDFGFAKRVK--------------GRT--------WXLCGTP------ 203
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 204 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 235
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 236 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 337
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
++ ++T + YAMK L K V+K Q+ H E+ IL + ++ KL +SF+D NLY V
Sbjct: 61 VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMV 120
Query: 139 MDYIPGEKLI 148
M+Y PG ++
Sbjct: 121 MEYAPGGEMF 130
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ ++T + YAMK + K
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK 77
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 134 bits (338), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 160/346 (46%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++T + Y MK + K E +++ ++ L ++ S
Sbjct: 51 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y PGG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 111 KDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N++ID+ G+IK+TDFG + GR W GTP
Sbjct: 171 NLMIDQQGYIKVTDFGFAKRVK--------------GRT--------WXLCGTP------ 202
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 203 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 234
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 235 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
++ ++T + YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY V
Sbjct: 60 VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 139 MDYIPGEKLI 148
M+Y PG ++
Sbjct: 120 MEYAPGGEMF 129
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ ++T + YAMK + K
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK 76
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
MK L K V+K Q+ H E+ IL + ++VKL +SF+ + + + MEYA
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-----VMEYAPG 125
Query: 61 ARVLKSI 67
+ +
Sbjct: 126 GEMFSHL 132
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 160/346 (46%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++T + Y MK + K E +++ ++ L ++ S
Sbjct: 52 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSF 111
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y PGG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 112 KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N++ID+ G+IK+TDFG + GR W GTP
Sbjct: 172 NLMIDQQGYIKVTDFGFAKRVK--------------GRT--------WXLCGTP------ 203
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 204 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 235
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 236 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 337
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
++ ++T + YAMK L K V+K Q+ H E+ IL + ++ KL +SF+D NLY V
Sbjct: 61 VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMV 120
Query: 139 MDYIPGEKLI 148
M+Y PG ++
Sbjct: 121 MEYAPGGEMF 130
Score = 36.2 bits (82), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ ++T + YAMK + K
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK 77
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 160/346 (46%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++T + Y MK + K E +++ ++ L ++ S
Sbjct: 52 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSF 111
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y PGG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 112 KDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N++ID+ G+IK+TDFG + GR W GTP
Sbjct: 172 NLMIDQQGYIKVTDFGFAKRVK--------------GRT--------WXLCGTP------ 203
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 204 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 235
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 236 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 337
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 43/70 (61%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
++ ++T + YAMK L K V+K Q+ H E+ IL + ++ KL +SF+D NLY V
Sbjct: 61 VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEFSFKDNSNLYMV 120
Query: 139 MDYIPGEKLI 148
M+Y PG ++
Sbjct: 121 MEYAPGGEMF 130
Score = 36.2 bits (82), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ ++T + YAMK + K
Sbjct: 44 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK 77
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 160/346 (46%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ +T + Y MK + K E +++ ++ L ++ S
Sbjct: 52 TGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 111
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+PGG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 112 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 203
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 204 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 235
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 236 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 337
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI 142
+T + YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y+
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 124
Query: 143 PGEKLI 148
PG ++
Sbjct: 125 PGGEMF 130
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ +T + YAMK + K
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK 77
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 134 bits (337), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 160/346 (46%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ +T + Y MK + K E +++ ++ L ++ S
Sbjct: 52 TGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 111
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+PGG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 112 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 203
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 204 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 235
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 236 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 337
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI 142
+T + YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y+
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 124
Query: 143 PGEKLI 148
PG ++
Sbjct: 125 PGGEMF 130
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ +T + YAMK + K
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK 77
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 160/346 (46%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ +T + Y MK + K E +++ ++ L ++ S
Sbjct: 44 TGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 103
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+PGG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 104 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 163
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 164 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 195
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 196 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 227
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 228 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 283
Query: 827 VKAHPFFSNVDFEKGV-RTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 284 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 329
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI 142
+T + YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y+
Sbjct: 57 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 116
Query: 143 PGEKLI 148
PG ++
Sbjct: 117 PGGEMF 122
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ +T + YAMK + K
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK 69
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGD 43
MK L K V+K Q+ H E+ IL + ++VKL +SF+ +
Sbjct: 64 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 106
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 134 bits (336), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/363 (28%), Positives = 165/363 (45%), Gaps = 83/363 (22%)
Query: 515 VGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGE 574
G+FG V LV+ +T + Y MK + K +V +++I+ H K I + V
Sbjct: 72 TGSFGRVMLVKHKETGNHYAMKILDKQ-----KVVKLKQIE--HTLNEKRILQAVNFPFL 124
Query: 575 VTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCA 634
V L N +NLY VM+Y+PGG++ S L + G F EP ARFY A++
Sbjct: 125 VKLEFSFKDN----------SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 174
Query: 635 VESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSME 694
E +H + I+RD+KP+N+LID+ G+I++TDFG + GR
Sbjct: 175 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------GRT---- 216
Query: 695 PSEEWSQ-GTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 753
W GTP LA ++ + Y +
Sbjct: 217 ----WXLCGTP-----------------------EYLAPEIILSKGY-----------NK 238
Query: 754 LCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC 813
DWW++GV++YEM G PPF A+ + K+++ + P + S + DL+ L
Sbjct: 239 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLL 294
Query: 814 -TGADKRLG--KNA-SEVKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPD 868
KR G KN +++K H +F+ D+ R + P IP+ + DTSNFD + +
Sbjct: 295 QVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 354
Query: 869 KLR 871
++R
Sbjct: 355 EIR 357
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI 142
+T + YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y+
Sbjct: 85 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 144
Query: 143 PGEKLI 148
PG ++
Sbjct: 145 PGGEMF 150
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ +T + YAMK + K
Sbjct: 64 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK 97
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 92 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 132
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 160/346 (46%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ +T + Y MK + K E +++ ++ L ++ S
Sbjct: 44 TGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 103
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+PGG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 104 KDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 163
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 164 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 195
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 196 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 227
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 228 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 283
Query: 827 VKAHPFFSNVDFEKGV-RTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 284 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 329
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI 142
+T + YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y+
Sbjct: 57 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 116
Query: 143 PGEKLI 148
PG ++
Sbjct: 117 PGGEMF 122
Score = 34.7 bits (78), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ +T + YAMK + K
Sbjct: 36 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK 69
Score = 30.4 bits (67), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 16/43 (37%), Positives = 25/43 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGD 43
MK L K V+K Q+ H E+ IL + ++VKL +SF+ +
Sbjct: 64 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDN 106
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 166/365 (45%), Gaps = 83/365 (22%)
Query: 515 VGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGE 574
G+FG V LV+ +T + + MK + K +V +++I+ H K I + V
Sbjct: 51 TGSFGRVMLVKHKETGNHFAMKILDKQ-----KVVKLKQIE--HTLNEKRILQAVNFPFL 103
Query: 575 VTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCA 634
V L N +NLY VM+Y+PGG++ S L + G F EP ARFY A++
Sbjct: 104 VKLEYSFKDN----------SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 635 VESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSME 694
E +H + I+RD+KP+N+LID+ G+I++TDFG + GR
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------GRT---- 195
Query: 695 PSEEWSQ-GTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 753
W GTP LA ++ + Y +
Sbjct: 196 ----WXLCGTP-----------------------EYLAPEIILSKGY-----------NK 217
Query: 754 LCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC 813
DWW++GV++YEM G PPF A+ + K+++ + P + S + DL+ L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLL 273
Query: 814 -TGADKRLG--KNA-SEVKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPD 868
KR G KN +++K H +F+ D+ R + P IP+ + DTSNFD + +
Sbjct: 274 QVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333
Query: 869 KLRNS 873
++R S
Sbjct: 334 EIRVS 338
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI 142
+T + +AMK L K V+K Q+ H E+ IL + ++VKL YSF+D NLY VM+Y+
Sbjct: 64 ETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYV 123
Query: 143 PGEKLI 148
PG ++
Sbjct: 124 PGGEMF 129
Score = 33.5 bits (75), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ +T + +AMK + K
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDK 76
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL YSF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFK 111
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 160/346 (46%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++T + Y MK + K E +++ ++ L ++ S
Sbjct: 51 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y PGG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 111 KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N++ID+ G+I++TDFG + GR W GTP
Sbjct: 171 NLMIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 202
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 203 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 234
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 235 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 44/70 (62%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
++ ++T + YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY V
Sbjct: 60 VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 139 MDYIPGEKLI 148
M+Y PG ++
Sbjct: 120 MEYAPGGEMF 129
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ ++T + YAMK + K
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK 76
Score = 31.2 bits (69), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
MK L K V+K Q+ H E+ IL + ++VKL +SF+ + + + MEYA
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-----VMEYAPG 125
Query: 61 ARVLKSI 67
+ +
Sbjct: 126 GEMFSHL 132
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 99/346 (28%), Positives = 159/346 (45%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ +T + Y MK + K E +++ ++ L ++ S
Sbjct: 52 TGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 111
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y PGG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 112 KDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N++ID+ G+IK+TDFG + GR W GTP
Sbjct: 172 NLMIDQQGYIKVTDFGFAKRVK--------------GRT--------WXLCGTP------ 203
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 204 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 235
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 236 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 337
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 41/66 (62%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI 142
+T + YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYA 124
Query: 143 PGEKLI 148
PG ++
Sbjct: 125 PGGEMF 130
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ +T + YAMK + K
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK 77
Score = 31.2 bits (69), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 33/67 (49%), Gaps = 5/67 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
MK L K V+K Q+ H E+ IL + ++VKL +SF+ + + + MEYA
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYM-----VMEYAPG 126
Query: 61 ARVLKSI 67
+ +
Sbjct: 127 GEMFSHL 133
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 133 bits (334), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 103/365 (28%), Positives = 164/365 (44%), Gaps = 83/365 (22%)
Query: 515 VGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGE 574
G+FG V LV+ +T + + MK + K +V +++I+ H K I + V
Sbjct: 51 TGSFGRVMLVKHKETGNHFAMKILDKQ-----KVVKLKQIE--HTLNEKRILQAVNFPFL 103
Query: 575 VTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCA 634
V L N +NLY VM+Y+PGG++ S L + G F EP ARFY A++
Sbjct: 104 VKLEYSFKDN----------SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 635 VESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSME 694
E +H + I+RD+KP+N+LID+ G+I++TDFG + GR
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------GRT---- 195
Query: 695 PSEEWSQ-GTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 753
W GTP LA ++ + Y +
Sbjct: 196 ----WXLCGTP-----------------------EYLAPEIILSKGY-----------NK 217
Query: 754 LCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC 813
DWW++GV++YEM G PPF A+ + K+++ + P + S + DL+ L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLL 273
Query: 814 -TGADKRLGK---NASEVKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPD 868
KR G +++K H +F+ D+ R + P IP+ + DTSNFD + +
Sbjct: 274 QVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333
Query: 869 KLRNS 873
++R S
Sbjct: 334 EIRVS 338
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI 142
+T + +AMK L K V+K Q+ H E+ IL + ++VKL YSF+D NLY VM+Y+
Sbjct: 64 ETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYV 123
Query: 143 PGEKLI 148
PG ++
Sbjct: 124 PGGEMF 129
Score = 33.5 bits (75), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ +T + +AMK + K
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDK 76
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL YSF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFK 111
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 132 bits (333), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 102/363 (28%), Positives = 163/363 (44%), Gaps = 83/363 (22%)
Query: 515 VGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGE 574
G+FG V LV+ +T + + MK + K +V +++I+ H K I + V
Sbjct: 51 TGSFGRVMLVKHKETGNHFAMKILDKQ-----KVVKLKQIE--HTLNEKRILQAVNFPFL 103
Query: 575 VTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCA 634
V L N +NLY VM+Y+PGG++ S L + G F EP ARFY A++
Sbjct: 104 VKLEYSFKDN----------SNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLT 153
Query: 635 VESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSME 694
E +H + I+RD+KP+N+LID+ G+I++TDFG + GR
Sbjct: 154 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------GRT---- 195
Query: 695 PSEEWSQ-GTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 753
W GTP LA ++ + Y +
Sbjct: 196 ----WXLCGTP-----------------------EYLAPEIILSKGY-----------NK 217
Query: 754 LCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC 813
DWW++GV++YEM G PPF A+ + K+++ + P + S + DL+ L
Sbjct: 218 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLL 273
Query: 814 -TGADKRLGK---NASEVKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPD 868
KR G +++K H +F+ D+ R + P IP+ + DTSNFD + +
Sbjct: 274 QVDLTKRFGNLKDGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 333
Query: 869 KLR 871
++R
Sbjct: 334 EIR 336
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI 142
+T + +AMK L K V+K Q+ H E+ IL + ++VKL YSF+D NLY VM+Y+
Sbjct: 64 ETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFKDNSNLYMVMEYV 123
Query: 143 PGEKLI 148
PG ++
Sbjct: 124 PGGEMF 129
Score = 33.5 bits (75), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ +T + +AMK + K
Sbjct: 43 FERIKTLGTGSFGRVMLVKHKETGNHFAMKILDK 76
Score = 31.6 bits (70), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL YSF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEYSFK 111
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 158/346 (45%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++T + Y MK + K E +++ ++ L ++ S
Sbjct: 51 TGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+ GG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 202
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 203 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 234
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLGK---NASE 826
PPF A+ + K+++ + P + S + DL+ L KR G ++
Sbjct: 235 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKDGVND 290
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 44/70 (62%)
Query: 79 IRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFV 138
++ ++T + YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY V
Sbjct: 60 VKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 139 MDYIPGEKLI 148
M+Y+ G ++
Sbjct: 120 MEYVAGGEMF 129
Score = 36.2 bits (82), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 24/34 (70%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ ++T + YAMK + K
Sbjct: 43 FERIKTLGTGSFGRVMLVKHMETGNHYAMKILDK 76
Score = 30.4 bits (67), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 132 bits (332), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 98/346 (28%), Positives = 159/346 (45%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ +T + Y MK + K E +++ ++ L ++ S
Sbjct: 52 TGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 111
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+PGG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 112 KDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 203
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 204 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 235
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 236 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+ H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 292 IXNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 337
Score = 58.5 bits (140), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 42/66 (63%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI 142
+T + YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y+
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYV 124
Query: 143 PGEKLI 148
PG ++
Sbjct: 125 PGGEMF 130
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/34 (47%), Positives = 23/34 (67%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +IK +G G+FG V LV+ +T + YAMK + K
Sbjct: 44 FERIKTLGTGSFGRVMLVKHKETGNHYAMKILDK 77
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 130 bits (328), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 108/378 (28%), Positives = 169/378 (44%), Gaps = 84/378 (22%)
Query: 501 DTNHLYVMKTIYKC-VGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHL 559
+T HL + I G+FG V LV+ +T + Y MK + K +V +++I+ H
Sbjct: 37 NTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQ-----KVVKLKQIE--HT 89
Query: 560 YVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIF 619
K I + V V L N +NLY V++Y PGG++ S L + G F
Sbjct: 90 LNEKRIQQAVNFPFLVKLEFSFKDN----------SNLYMVLEYAPGGEMFSHLRRIGRF 139
Query: 620 EEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSK 679
EP ARFY A++ E +H + I+RD+KP+N+LID+ G+IK+ DFG +
Sbjct: 140 SEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK------ 193
Query: 680 YYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTP 738
GR W GTP LA ++ +
Sbjct: 194 --------GRT--------WXLCGTP-----------------------EYLAPEIILSK 214
Query: 739 NYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAE 798
Y + DWW++GV++YEM G PPF A+ + K+++ + P
Sbjct: 215 GY-----------NKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--GKVRFP-- 259
Query: 799 AQLSPEGADLILQLC-TGADKRLG--KNA-SEVKAHPFFSNVDF-EKGVRTLTPPHIPRI 853
+ S + DL+ L KR G KN +++K H +F+ D+ R + P IP+
Sbjct: 260 SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKF 319
Query: 854 QNSMDTSNFDPVDPDKLR 871
+ DTSNFD + +++R
Sbjct: 320 KGPGDTSNFDDYEEEEIR 337
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 40/66 (60%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI 142
+T + YAMK L K V+K Q+ H E+ I + ++VKL +SF+D NLY V++Y
Sbjct: 65 ETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEFSFKDNSNLYMVLEYA 124
Query: 143 PGEKLI 148
PG ++
Sbjct: 125 PGGEMF 130
Score = 33.9 bits (76), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 23/34 (67%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F +I+ +G G+FG V LV+ +T + YAMK + K
Sbjct: 44 FERIRTLGTGSFGRVMLVKHKETGNHYAMKILDK 77
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 130 bits (327), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 160/346 (46%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++ + Y MK + K E +++ ++ L ++ S
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+ GG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 202
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA +++ + Y + DWW++GV++YEM G
Sbjct: 203 -----------------EYLAPAIILSKGY-----------NKAVDWWALGVLIYEMAAG 234
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 235 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 85 NHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 144
NH YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y+ G
Sbjct: 67 NH-YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 145 EKLI 148
++
Sbjct: 126 GEMF 129
Score = 34.3 bits (77), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 446 AKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
A++D+ F +IK +G G+FG V LV+ ++ + YAMK + K
Sbjct: 38 AQLDQ--FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Score = 30.4 bits (67), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 130 bits (327), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 95/346 (27%), Positives = 157/346 (45%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++ + Y MK + K E +++ ++ L ++ S
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+ GG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 202
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 203 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 234
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQL----CTGADKRLGKNASE 826
PPF A+ + K+++ + P + S + DL+ L T A L ++
Sbjct: 235 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKAFGNLKNGVND 290
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 85 NHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 144
NH YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y+ G
Sbjct: 67 NH-YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 145 EKLI 148
++
Sbjct: 126 GEMF 129
Score = 34.3 bits (77), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 446 AKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
A++D+ F +IK +G G+FG V LV+ ++ + YAMK + K
Sbjct: 38 AQLDQ--FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 159/346 (45%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++ + Y MK + K E +++ ++ L ++ S
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+ GG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 202
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 203 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 234
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 235 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 85 NHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 144
NH YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y+ G
Sbjct: 67 NH-YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 145 EKLI 148
++
Sbjct: 126 GEMF 129
Score = 34.3 bits (77), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 446 AKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
A++D+ F +IK +G G+FG V LV+ ++ + YAMK + K
Sbjct: 38 AQLDQ--FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 130 bits (326), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 159/346 (45%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++ + Y MK + K E +++ ++ L ++ S
Sbjct: 52 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 111
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+ GG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 112 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 171
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 172 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 203
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 204 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 235
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 236 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 291
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 292 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 337
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 85 NHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 144
NH YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y+ G
Sbjct: 68 NH-YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 126
Query: 145 EKLI 148
++
Sbjct: 127 GEMF 130
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 446 AKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
A++D+ F +IK +G G+FG V LV+ ++ + YAMK + K
Sbjct: 39 AQLDQ--FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK 77
Score = 30.4 bits (67), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 72 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 112
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 130 bits (326), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 159/346 (45%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++ + Y MK + K E +++ ++ L ++ S
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+ GG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 202
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 203 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 234
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 235 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 85 NHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 144
NH YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y+ G
Sbjct: 67 NH-YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 145 EKLI 148
++
Sbjct: 126 GEMF 129
Score = 34.3 bits (77), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 446 AKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
A++D+ F +IK +G G+FG V LV+ ++ + YAMK + K
Sbjct: 38 AQLDQ--FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 159/346 (45%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++ + Y MK + K E +++ ++ L ++ S
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+ GG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 202
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 203 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 234
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 235 YPPFFADEPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 85 NHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 144
NH YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y+ G
Sbjct: 67 NH-YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 145 EKLI 148
++
Sbjct: 126 GEMF 129
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 446 AKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
A++D+ F +IK +G G+FG V LV+ ++ + YAMK + K
Sbjct: 38 AQLDQ--FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Score = 30.4 bits (67), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 159/346 (45%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++ + Y MK + K E +++ ++ L ++ S
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+ GG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 202
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 203 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 234
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 235 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 85 NHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 144
NH YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y+ G
Sbjct: 67 NH-YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 145 EKLI 148
++
Sbjct: 126 GEMF 129
Score = 34.3 bits (77), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 446 AKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
A++D+ F +IK +G G+FG V LV+ ++ + YAMK + K
Sbjct: 38 AQLDQ--FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 159/346 (45%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++ + Y MK + K E +++ ++ L ++ S
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+ GG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 202
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 203 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 234
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 235 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 85 NHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 144
NH YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y+ G
Sbjct: 67 NH-YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 145 EKLI 148
++
Sbjct: 126 GEMF 129
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 446 AKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
A++D+ F +IK +G G+FG V LV+ ++ + YAMK + K
Sbjct: 38 AQLDQ--FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 129 bits (325), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 159/346 (45%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++ + Y MK + K E +++ ++ L ++ S
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+ GG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 202
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 203 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 234
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 235 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 85 NHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 144
NH YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y+ G
Sbjct: 67 NH-YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 145 EKLI 148
++
Sbjct: 126 GEMF 129
Score = 33.9 bits (76), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 446 AKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
A++D+ F +IK +G G+FG V LV+ ++ + YAMK + K
Sbjct: 38 AQLDQ--FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Score = 30.4 bits (67), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 129 bits (325), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 159/346 (45%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++ + Y MK + K E +++ ++ L ++ S
Sbjct: 46 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 105
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+ GG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 106 KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 165
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 166 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 197
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 198 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 229
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 230 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 285
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 286 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 331
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 85 NHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 144
NH YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y+ G
Sbjct: 62 NH-YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 120
Query: 145 EKLI 148
++
Sbjct: 121 GEMF 124
Score = 33.9 bits (76), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 446 AKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
A++D+ F +IK +G G+FG V LV+ ++ + YAMK + K
Sbjct: 33 AQLDQ--FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK 71
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 66 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 106
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 129 bits (324), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 97/348 (27%), Positives = 160/348 (45%), Gaps = 76/348 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++ + Y MK + K E +++ ++ L ++ S
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+ GG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N++ID+ G+I++TDFG + GR W GTP
Sbjct: 171 NLIIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 202
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 203 -----------------EYLAPEIIISKGY-----------NKAVDWWALGVLIYEMAAG 234
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 235 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLRNS 873
+K H +F+ D+ R + P IP+ + DTSNFD + +++R S
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIRVS 338
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 85 NHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 144
NH YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y+ G
Sbjct: 67 NH-YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 145 EKLI 148
++
Sbjct: 126 GEMF 129
Score = 34.3 bits (77), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 446 AKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
A++D+ F +IK +G G+FG V LV+ ++ + YAMK + K
Sbjct: 38 AQLDQ--FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 129 bits (324), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 97/346 (28%), Positives = 159/346 (45%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++ + Y MK + K E +++ ++ L ++ S
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+ GG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 202
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 203 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 234
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 235 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 85 NHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 144
NH YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y+ G
Sbjct: 67 NH-YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 145 EKLI 148
++
Sbjct: 126 GEMF 129
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 446 AKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
A++D+ F +IK +G G+FG V LV+ ++ + YAMK + K
Sbjct: 38 AQLDQ--FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 97/345 (28%), Positives = 158/345 (45%), Gaps = 76/345 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS-- 592
G FG V LV+ ++ + Y MK + K E +++ ++ L ++ S
Sbjct: 39 GSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 98
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
++NLY VM+Y+ GG++ S L + G F EP ARFY A++ E +H + I+RD+KP+N
Sbjct: 99 DNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPEN 158
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRCI 711
+LID G+I++TDFG + GR W GTP
Sbjct: 159 LLIDEQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------- 189
Query: 712 NSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGS 771
LA ++ + Y + DWW++GV++YEM G
Sbjct: 190 ----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAGY 222
Query: 772 PPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SEV 827
PPF A+ + K+++ + P + S + DL+ L KR G KN +++
Sbjct: 223 PPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDI 278
Query: 828 KAHPFFSNVDFEKGV-RTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 279 KNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 323
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 85 NHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 144
NH YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y+ G
Sbjct: 54 NH-YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 112
Query: 145 EKLI 148
++
Sbjct: 113 GEMF 116
Score = 33.9 bits (76), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 446 AKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
A++D+ F +IK +G G+FG V LV+ ++ + YAMK + K
Sbjct: 25 AQLDQ--FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK 63
Score = 30.4 bits (67), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 58 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 98
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 129 bits (323), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 96/346 (27%), Positives = 159/346 (45%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++ + Y MK + K E +++ ++ L ++ S
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+ GG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 202
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++Y+M G
Sbjct: 203 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYQMAAG 234
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SE 826
PPF A+ + K+++ + P + S + DL+ L KR G KN ++
Sbjct: 235 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVND 290
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSNFD + +++R
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEEEIR 336
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 85 NHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 144
NH YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y+ G
Sbjct: 67 NH-YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 145 EKLI 148
++
Sbjct: 126 GEMF 129
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 446 AKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
A++D+ F +IK +G G+FG V LV+ ++ + YAMK + K
Sbjct: 38 AQLDQ--FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 126 bits (317), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 102/362 (28%), Positives = 163/362 (45%), Gaps = 83/362 (22%)
Query: 515 VGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGE 574
G+FG V LV+ ++ + Y MK + K +V +++I+ H K I + V
Sbjct: 72 TGSFGRVMLVKHKESGNHYAMKILDKQ-----KVVKLKQIE--HTLNEKRILQAVNFPFL 124
Query: 575 VTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCA 634
V L N +NLY VM+Y+ GG++ S L + G F EP ARFY A++
Sbjct: 125 VKLEFSFKDN----------SNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLT 174
Query: 635 VESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSME 694
E +H + I+RD+KP+N+LID+ G+I++TDFG + GR
Sbjct: 175 FEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK--------------GRT---- 216
Query: 695 PSEEWSQ-GTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 753
W GTP LA ++ + Y +
Sbjct: 217 ----WXLCGTP-----------------------EYLAPEIILSKGY-----------NK 238
Query: 754 LCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC 813
DWW++GV++YEM G PPF A+ + K+++ + P + S + DL+ L
Sbjct: 239 AVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLL 294
Query: 814 -TGADKRLG--KNA-SEVKAHPFFSNVDFEKGV-RTLTPPHIPRIQNSMDTSNFDPVDPD 868
KR G KN +++K H +F+ D+ R + P IP+ + DTSNFD + +
Sbjct: 295 QVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNFDDYEEE 354
Query: 869 KL 870
++
Sbjct: 355 EI 356
Score = 54.7 bits (130), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 85 NHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 144
NH YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y+ G
Sbjct: 88 NH-YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 146
Query: 145 EKLI 148
++
Sbjct: 147 GEMF 150
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 446 AKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
A++D+ F +IK +G G+FG V LV+ ++ + YAMK + K
Sbjct: 59 AQLDQ--FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK 97
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 92 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 132
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 125 bits (315), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 94/346 (27%), Positives = 156/346 (45%), Gaps = 76/346 (21%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++ + Y MK + K E +++ ++ L ++ S
Sbjct: 51 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 110
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+ GG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 111 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 170
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ-GTPGQECRC 710
N+LID+ G+I++TDFG + GR W GTP
Sbjct: 171 NLLIDQQGYIQVTDFGFAKRVK--------------GRT--------WXLCGTP------ 202
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
LA ++ + Y + DWW++GV++YEM G
Sbjct: 203 -----------------EYLAPEIILSKGY-----------NKAVDWWALGVLIYEMAAG 234
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC-TGADKRLG---KNASE 826
PPF A+ + K+++ + P + S + DL+ L KR G ++
Sbjct: 235 YPPFFADQPIQIYEKIVS--GKVRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLPNGVND 290
Query: 827 VKAHPFFSNVDF-EKGVRTLTPPHIPRIQNSMDTSNFDPVDPDKLR 871
+K H +F+ D+ R + P IP+ + DTSN D + +++R
Sbjct: 291 IKNHKWFATTDWIAIYQRKVEAPFIPKFKGPGDTSNADDYEEEEIR 336
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 85 NHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 144
NH YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y+ G
Sbjct: 67 NH-YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 125
Query: 145 EKLI 148
++
Sbjct: 126 GEMF 129
Score = 34.3 bits (77), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 446 AKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
A++D+ F +IK +G G+FG V LV+ ++ + YAMK + K
Sbjct: 38 AQLDQ--FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK 76
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 71 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 111
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 155/361 (42%), Gaps = 81/361 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKC--------VGAFGE---VTLVRKIDTNHLYVMKG 591
G FGEV RK DT +Y MK + K A E ++LV D + M
Sbjct: 200 GGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSY 259
Query: 592 SPH--NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIK 649
+ H + L F++D + GGDL L + G+F E RFY AE+ +E +H ++RD+K
Sbjct: 260 AFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLK 319
Query: 650 PDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECR 709
P NIL+D GH++++D GL F K + S G HG
Sbjct: 320 PANILLDEHGHVRISDLGLACDF---SKKKPHASVGTHG--------------------- 355
Query: 710 CINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEML 768
Y+APEVL + Y DW+S+G +L+++L
Sbjct: 356 ------------------------------YMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
Query: 769 VGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKR----LGKNA 824
G PF + + + ++++ + + SPE L+ L R LG+ A
Sbjct: 386 RGHSPFRQHKTKD-KHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGA 444
Query: 825 SEVKAHPFFSNVDFEK-GVRTLTPPHIP-----RIQNSMDTSNFDPVDPD--KLRNSDSM 876
EVK PFF ++D++ ++ PP IP ++ D +FD D KL +SD
Sbjct: 445 QEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQE 504
Query: 877 L 877
L
Sbjct: 505 L 505
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 18/28 (64%)
Query: 459 IGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
IG G FGEV RK DT +YAMK + K
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDK 224
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAER---DILAEADNEWVVKLYYSFQDKDNLY 136
R DT +YAMK L K + + ER +++ D ++V + Y+F D L
Sbjct: 209 RKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268
Query: 137 FVMDYIPGEKL 147
F++D + G L
Sbjct: 269 FILDLMNGGDL 279
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 155/361 (42%), Gaps = 81/361 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKC--------VGAFGE---VTLVRKIDTNHLYVMKG 591
G FGEV RK DT +Y MK + K A E ++LV D + M
Sbjct: 199 GGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSY 258
Query: 592 SPH--NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIK 649
+ H + L F++D + GGDL L + G+F E RFY AE+ +E +H ++RD+K
Sbjct: 259 AFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLK 318
Query: 650 PDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECR 709
P NIL+D GH++++D GL F K + S G HG
Sbjct: 319 PANILLDEHGHVRISDLGLACDF---SKKKPHASVGTHG--------------------- 354
Query: 710 CINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEML 768
Y+APEVL + Y DW+S+G +L+++L
Sbjct: 355 ------------------------------YMAPEVLQKGVAYDSSADWFSLGCMLFKLL 384
Query: 769 VGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKR----LGKNA 824
G PF + + + ++++ + + SPE L+ L R LG+ A
Sbjct: 385 RGHSPFRQHKTKD-KHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGA 443
Query: 825 SEVKAHPFFSNVDFEK-GVRTLTPPHIP-----RIQNSMDTSNFDPVDPD--KLRNSDSM 876
EVK PFF ++D++ ++ PP IP ++ D +FD D KL +SD
Sbjct: 444 QEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQE 503
Query: 877 L 877
L
Sbjct: 504 L 504
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 18/28 (64%)
Query: 459 IGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
IG G FGEV RK DT +YAMK + K
Sbjct: 196 IGRGGFGEVYGCRKADTGKMYAMKCLDK 223
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAER---DILAEADNEWVVKLYYSFQDKDNLY 136
R DT +YAMK L K + + ER +++ D ++V + Y+F D L
Sbjct: 208 RKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 267
Query: 137 FVMDYIPGEKL 147
F++D + G L
Sbjct: 268 FILDLMNGGDL 278
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 155/361 (42%), Gaps = 81/361 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKC--------VGAFGE---VTLVRKIDTNHLYVMKG 591
G FGEV RK DT +Y MK + K A E ++LV D + M
Sbjct: 200 GGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSY 259
Query: 592 SPH--NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIK 649
+ H + L F++D + GGDL L + G+F E RFY AE+ +E +H ++RD+K
Sbjct: 260 AFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLK 319
Query: 650 PDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECR 709
P NIL+D GH++++D GL F K + S G HG
Sbjct: 320 PANILLDEHGHVRISDLGLACDF---SKKKPHASVGTHG--------------------- 355
Query: 710 CINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEML 768
Y+APEVL + Y DW+S+G +L+++L
Sbjct: 356 ------------------------------YMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
Query: 769 VGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKR----LGKNA 824
G PF + + + ++++ + + SPE L+ L R LG+ A
Sbjct: 386 RGHSPFRQHKTKD-KHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGA 444
Query: 825 SEVKAHPFFSNVDFEK-GVRTLTPPHIP-----RIQNSMDTSNFDPVDPD--KLRNSDSM 876
EVK PFF ++D++ ++ PP IP ++ D +FD D KL +SD
Sbjct: 445 QEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQE 504
Query: 877 L 877
L
Sbjct: 505 L 505
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAER---DILAEADNEWVVKLYYSFQDKDNLY 136
R DT +YAMK L K + + ER +++ D ++V + Y+F D L
Sbjct: 209 RKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268
Query: 137 FVMDYIPGEKL 147
F++D + G L
Sbjct: 269 FILDLMNGGDL 279
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 18/28 (64%)
Query: 459 IGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
IG G FGEV RK DT +YAMK + K
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDK 224
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 102/361 (28%), Positives = 155/361 (42%), Gaps = 81/361 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKC--------VGAFGE---VTLVRKIDTNHLYVMKG 591
G FGEV RK DT +Y MK + K A E ++LV D + M
Sbjct: 200 GGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSY 259
Query: 592 SPH--NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIK 649
+ H + L F++D + GGDL L + G+F E RFY AE+ +E +H ++RD+K
Sbjct: 260 AFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVYRDLK 319
Query: 650 PDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECR 709
P NIL+D GH++++D GL F K + S G HG
Sbjct: 320 PANILLDEHGHVRISDLGLACDF---SKKKPHASVGTHG--------------------- 355
Query: 710 CINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEML 768
Y+APEVL + Y DW+S+G +L+++L
Sbjct: 356 ------------------------------YMAPEVLQKGVAYDSSADWFSLGCMLFKLL 385
Query: 769 VGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKR----LGKNA 824
G PF + + + ++++ + + SPE L+ L R LG+ A
Sbjct: 386 RGHSPFRQHKTKD-KHEIDRMTLTMAVELPDSFSPELRSLLEGLLQRDVNRRLGCLGRGA 444
Query: 825 SEVKAHPFFSNVDFEK-GVRTLTPPHIP-----RIQNSMDTSNFDPVDPD--KLRNSDSM 876
EVK PFF ++D++ ++ PP IP ++ D +FD D KL +SD
Sbjct: 445 QEVKESPFFRSLDWQMVFLQKYPPPLIPPRGEVNAADAFDIGSFDEEDTKGIKLLDSDQE 504
Query: 877 L 877
L
Sbjct: 505 L 505
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%), Gaps = 3/71 (4%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAER---DILAEADNEWVVKLYYSFQDKDNLY 136
R DT +YAMK L K + + ER +++ D ++V + Y+F D L
Sbjct: 209 RKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAFHTPDKLS 268
Query: 137 FVMDYIPGEKL 147
F++D + G L
Sbjct: 269 FILDLMNGGDL 279
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/28 (57%), Positives = 18/28 (64%)
Query: 459 IGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
IG G FGEV RK DT +YAMK + K
Sbjct: 197 IGRGGFGEVYGCRKADTGKMYAMKCLDK 224
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 122 bits (305), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 143/323 (44%), Gaps = 70/323 (21%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFGEVTLVRKIDT----NHLYVMK----GS 592
G F V L R++ T+ Y +K + K + + R+ D +H + +K
Sbjct: 40 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 99
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
LYF + Y G+L+ + K G F+E RFY AE+ A+E +H G IHRD+KP+N
Sbjct: 100 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 159
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
IL++ D HI++TDFG +
Sbjct: 160 ILLNEDMHIQITDFGTAK----------------------------------------VL 179
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
SP ++ A+S VGT Y++PE+L + D W++G I+Y+++ G P
Sbjct: 180 SP----------ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 229
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASE----V 827
PF A K+I E P + P+ DL+ +L A KRLG E +
Sbjct: 230 PFRAGNEYLIFQKIIKLE--YDFP--EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 285
Query: 828 KAHPFFSNVDFEKGVRTLTPPHI 850
KAHPFF +V +E + TPP +
Sbjct: 286 KAHPFFESVTWE-NLHQQTPPKL 307
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
ILGE + R + T+ YA+K L K ++K N+V +V ERD+++ D+ + VKLY
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 95
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
++FQD + LYF + Y +L+
Sbjct: 96 FTFQDDEKLYFGLSYAKNGELL 117
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
+K L K ++K N+V +V ERD+++ D+ + VKLY++FQ D + GL YA
Sbjct: 59 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-----SYAKN 113
Query: 61 ARVLKSI 67
+LK I
Sbjct: 114 GELLKYI 120
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 143/323 (44%), Gaps = 70/323 (21%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFGEVTLVRKIDT----NHLYVMK----GS 592
G F V L R++ T+ Y +K + K + + R+ D +H + +K
Sbjct: 44 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 103
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
LYF + Y G+L+ + K G F+E RFY AE+ A+E +H G IHRD+KP+N
Sbjct: 104 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 163
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
IL++ D HI++TDFG +
Sbjct: 164 ILLNEDMHIQITDFGTAK----------------------------------------VL 183
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
SP ++ A+S VGT Y++PE+L + D W++G I+Y+++ G P
Sbjct: 184 SP----------ESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 233
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASE----V 827
PF A K+I E P + P+ DL+ +L A KRLG E +
Sbjct: 234 PFRAGNEYLIFQKIIKLE--YDFP--EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 289
Query: 828 KAHPFFSNVDFEKGVRTLTPPHI 850
KAHPFF +V +E + TPP +
Sbjct: 290 KAHPFFESVTWEN-LHQQTPPKL 311
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
ILGE + R + T+ YA+K L K ++K N+V +V ERD+++ D+ + VKLY
Sbjct: 40 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 99
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
++FQD + LYF + Y +L+
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELL 121
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
+K L K ++K N+V +V ERD+++ D+ + VKLY++FQ D + GL YA
Sbjct: 63 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-----SYAKN 117
Query: 61 ARVLKSI 67
+LK I
Sbjct: 118 GELLKYI 124
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 143/323 (44%), Gaps = 70/323 (21%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFGEVTLVRKIDT----NHLYVMK----GS 592
G F V L R++ T+ Y +K + K + + R+ D +H + +K
Sbjct: 41 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 100
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
LYF + Y G+L+ + K G F+E RFY AE+ A+E +H G IHRD+KP+N
Sbjct: 101 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 160
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
IL++ D HI++TDFG +
Sbjct: 161 ILLNEDMHIQITDFGTAK----------------------------------------VL 180
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
SP ++ A++ VGT Y++PE+L + D W++G I+Y+++ G P
Sbjct: 181 SP----------ESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 230
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASE----V 827
PF A K+I E P + P+ DL+ +L A KRLG E +
Sbjct: 231 PFRAGNEYLIFQKIIKLE--YDFP--EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 286
Query: 828 KAHPFFSNVDFEKGVRTLTPPHI 850
KAHPFF +V +E + TPP +
Sbjct: 287 KAHPFFESVTWE-NLHQQTPPKL 308
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
ILGE + R + T+ YA+K L K ++K N+V +V ERD+++ D+ + VKLY
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
++FQD + LYF + Y +L+
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELL 118
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
+K L K ++K N+V +V ERD+++ D+ + VKLY++FQ D + GL YA
Sbjct: 60 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-----SYAKN 114
Query: 61 ARVLKSI 67
+LK I
Sbjct: 115 GELLKYI 121
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 141/323 (43%), Gaps = 70/323 (21%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFGEVTLVRKIDT----NHLYVMK----GS 592
G F V L R++ T+ Y +K + K + + R+ D +H + +K
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
LYF + Y G+L+ + K G F+E RFY AE+ A+E +H G IHRD+KP+N
Sbjct: 103 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 162
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
IL++ D HI++TDFG +
Sbjct: 163 ILLNEDMHIQITDFGTAK----------------------------------------VL 182
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
SP ++ A+ VGT Y++PE+L + D W++G I+Y+++ G P
Sbjct: 183 SP----------ESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLP 232
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASE----V 827
PF A K+I E + P+ DL+ +L A KRLG E +
Sbjct: 233 PFRAGNEGLIFAKIIKLEYDF----PEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 288
Query: 828 KAHPFFSNVDFEKGVRTLTPPHI 850
KAHPFF +V +E + TPP +
Sbjct: 289 KAHPFFESVTWEN-LHQQTPPKL 310
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
ILGE + R + T+ YA+K L K ++K N+V +V ERD+++ D+ + VKLY
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
++FQD + LYF + Y +L+
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELL 120
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
+K L K ++K N+V +V ERD+++ D+ + VKLY++FQ D + GL YA
Sbjct: 62 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-----SYAKN 116
Query: 61 ARVLKSI 67
+LK I
Sbjct: 117 GELLKYI 123
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 141/323 (43%), Gaps = 70/323 (21%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFGEVTLVRKIDT----NHLYVMK----GS 592
G F V L R++ T+ Y +K + K + + R+ D +H + +K
Sbjct: 18 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 77
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
LYF + Y G+L+ + K G F+E RFY AE+ A+E +H G IHRD+KP+N
Sbjct: 78 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 137
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
IL++ D HI++TDFG +
Sbjct: 138 ILLNEDMHIQITDFGTAK----------------------------------------VL 157
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
SP ++ A+ VGT Y++PE+L + D W++G I+Y+++ G P
Sbjct: 158 SP----------ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 207
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASE----V 827
PF A K+I E + P+ DL+ +L A KRLG E +
Sbjct: 208 PFRAGNEYLIFQKIIKLEYDF----PEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 263
Query: 828 KAHPFFSNVDFEKGVRTLTPPHI 850
KAHPFF +V +E + TPP +
Sbjct: 264 KAHPFFESVTWE-NLHQQTPPKL 285
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
ILGE + R + T+ YA+K L K ++K N+V +V ERD+++ D+ + VKLY
Sbjct: 14 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 73
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
++FQD + LYF + Y +L+
Sbjct: 74 FTFQDDEKLYFGLSYAKNGELL 95
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
+K L K ++K N+V +V ERD+++ D+ + VKLY++FQ D + GL YA
Sbjct: 37 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-----SYAKN 91
Query: 61 ARVLKSI 67
+LK I
Sbjct: 92 GELLKYI 98
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 139/323 (43%), Gaps = 70/323 (21%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFGEVTLVRKIDT----NHLYVMK----GS 592
G F V L R++ T+ Y +K + K + + R+ D +H + +K
Sbjct: 21 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 80
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
LYF + Y G+L+ + K G F+E RFY AE+ A+E +H G IHRD+KP+N
Sbjct: 81 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 140
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
IL++ D HI++TDFG +K R
Sbjct: 141 ILLNEDMHIQITDFG---------TAKVLSPESKQAR----------------------- 168
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
A+ VGT Y++PE+L + D W++G I+Y+++ G P
Sbjct: 169 ------------------ANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 210
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASE----V 827
PF A K+I E + P+ DL+ +L A KRLG E +
Sbjct: 211 PFRAGNEYLIFQKIIKLEYDF----PEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 266
Query: 828 KAHPFFSNVDFEKGVRTLTPPHI 850
KAHPFF +V +E + TPP +
Sbjct: 267 KAHPFFESVTWE-NLHQQTPPKL 288
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
ILGE + R + T+ YA+K L K ++K N+V +V ERD+++ D+ + VKLY
Sbjct: 17 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 76
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
++FQD + LYF + Y +L+
Sbjct: 77 FTFQDDEKLYFGLSYAKNGELL 98
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
+K L K ++K N+V +V ERD+++ D+ + VKLY++FQ D + GL YA
Sbjct: 40 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-----SYAKN 94
Query: 61 ARVLKSI 67
+LK I
Sbjct: 95 GELLKYI 101
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 141/323 (43%), Gaps = 70/323 (21%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFGEVTLVRKIDT----NHLYVMK----GS 592
G F V L R++ T+ Y +K + K + + R+ D +H + +K
Sbjct: 19 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 78
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
LYF + Y G+L+ + K G F+E RFY AE+ A+E +H G IHRD+KP+N
Sbjct: 79 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 138
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
IL++ D HI++TDFG +
Sbjct: 139 ILLNEDMHIQITDFGTAK----------------------------------------VL 158
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
SP ++ A+ VGT Y++PE+L + D W++G I+Y+++ G P
Sbjct: 159 SP----------ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 208
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASE----V 827
PF A K+I E + P+ DL+ +L A KRLG E +
Sbjct: 209 PFRAGNEYLIFQKIIKLEYDF----PEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 264
Query: 828 KAHPFFSNVDFEKGVRTLTPPHI 850
KAHPFF +V +E + TPP +
Sbjct: 265 KAHPFFESVTWE-NLHQQTPPKL 286
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
ILGE + R + T+ YA+K L K ++K N+V +V ERD+++ D+ + VKLY
Sbjct: 15 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 74
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
++FQD + LYF + Y +L+
Sbjct: 75 FTFQDDEKLYFGLSYAKNGELL 96
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
+K L K ++K N+V +V ERD+++ D+ + VKLY++FQ D + GL YA
Sbjct: 38 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-----SYAKN 92
Query: 61 ARVLKSI 67
+LK I
Sbjct: 93 GELLKYI 99
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 141/323 (43%), Gaps = 70/323 (21%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFGEVTLVRKIDT----NHLYVMK----GS 592
G F V L R++ T+ Y +K + K + + R+ D +H + +K
Sbjct: 46 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 105
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
LYF + Y G+L+ + K G F+E RFY AE+ A+E +H G IHRD+KP+N
Sbjct: 106 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 165
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
IL++ D HI++TDFG +
Sbjct: 166 ILLNEDMHIQITDFGTAK----------------------------------------VL 185
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
SP ++ A+ VGT Y++PE+L + D W++G I+Y+++ G P
Sbjct: 186 SP----------ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 235
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASE----V 827
PF A K+I E A P+ DL+ +L A KRLG E +
Sbjct: 236 PFRAGNEYLIFQKIIKLEYDF----PAAFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 291
Query: 828 KAHPFFSNVDFEKGVRTLTPPHI 850
KAHPFF +V +E + TPP +
Sbjct: 292 KAHPFFESVTWEN-LHQQTPPKL 313
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
ILGE + R + T+ YA+K L K ++K N+V +V ERD+++ D+ + VKLY
Sbjct: 42 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 101
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
++FQD + LYF + Y +L+
Sbjct: 102 FTFQDDEKLYFGLSYAKNGELL 123
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
+K L K ++K N+V +V ERD+++ D+ + VKLY++FQ D + GL YA
Sbjct: 65 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-----SYAKN 119
Query: 61 ARVLKSI 67
+LK I
Sbjct: 120 GELLKYI 126
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 92/321 (28%), Positives = 140/321 (43%), Gaps = 70/321 (21%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFGEVTLVRKIDT----NHLYVMK----GS 592
G F V L R++ T+ Y +K + K + + R+ D +H + +K
Sbjct: 20 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 79
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
LYF + Y G+L+ + K G F+E RFY AE+ A+E +H G IHRD+KP+N
Sbjct: 80 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 139
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
IL++ D HI++TDFG +
Sbjct: 140 ILLNEDMHIQITDFGTAK----------------------------------------VL 159
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
SP ++ A+ VGT Y++PE+L + D W++G I+Y+++ G P
Sbjct: 160 SP----------ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 209
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASE----V 827
PF A K+I E + P+ DL+ +L A KRLG E +
Sbjct: 210 PFRAGNEYLIFQKIIKLEYDF----PEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 265
Query: 828 KAHPFFSNVDFEKGVRTLTPP 848
KAHPFF +V +E + TPP
Sbjct: 266 KAHPFFESVTWE-NLHQQTPP 285
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
ILGE + R + T+ YA+K L K ++K N+V +V ERD+++ D+ + VKLY
Sbjct: 16 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 75
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
++FQD + LYF + Y +L+
Sbjct: 76 FTFQDDEKLYFGLSYAKNGELL 97
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
+K L K ++K N+V +V ERD+++ D+ + VKLY++FQ D + GL YA
Sbjct: 39 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-----SYAKN 93
Query: 61 ARVLKSI 67
+LK I
Sbjct: 94 GELLKYI 100
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 120 bits (302), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 142/323 (43%), Gaps = 70/323 (21%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFGEVTLVRKIDT----NHLYVMK----GS 592
G F V L R++ T+ Y +K + K + + R+ D +H + +K
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
LYF + Y G+L+ + K G F+E RFY AE+ A+E +H G IHRD+KP+N
Sbjct: 103 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 162
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
IL++ D HI++TDFG +
Sbjct: 163 ILLNEDMHIQITDFGTAK----------------------------------------VL 182
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
SP ++ A+ VGT Y++PE+L + D W++G I+Y+++ G P
Sbjct: 183 SP----------ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 232
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASE----V 827
PF A K+I E P + P+ DL+ +L A KRLG E +
Sbjct: 233 PFRAGNEGLIFAKIIKLE--YDFP--EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 288
Query: 828 KAHPFFSNVDFEKGVRTLTPPHI 850
KAHPFF +V +E + TPP +
Sbjct: 289 KAHPFFESVTWEN-LHQQTPPKL 310
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
ILGE + R + T+ YA+K L K ++K N+V +V ERD+++ D+ + VKLY
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
++FQD + LYF + Y +L+
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELL 120
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
+K L K ++K N+V +V ERD+++ D+ + VKLY++FQ D + GL YA
Sbjct: 62 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-----SYAKN 116
Query: 61 ARVLKSI 67
+LK I
Sbjct: 117 GELLKYI 123
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 94/323 (29%), Positives = 143/323 (44%), Gaps = 70/323 (21%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFGEVTLVRKIDT----NHLYVMK----GS 592
G F V L R++ T+ Y +K + K + + R+ D +H + +K
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
LYF + Y G L+ + K G F+E RFY AE+ A+E +H G IHRD+KP+N
Sbjct: 103 DDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 162
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
IL++ D HI++TDFG +
Sbjct: 163 ILLNEDMHIQITDFGTAK----------------------------------------VL 182
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
SP ++ A+S VGT Y++PE+L ++ D W++G I+Y+++ G P
Sbjct: 183 SP----------ESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLP 232
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASE----V 827
PF A K+I E P + P+ DL+ +L A KRLG E +
Sbjct: 233 PFRAGNEYLIFQKIIKLE--YDFP--EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 288
Query: 828 KAHPFFSNVDFEKGVRTLTPPHI 850
KAHPFF +V +E + TPP +
Sbjct: 289 KAHPFFESVTWEN-LHQQTPPKL 310
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 47/75 (62%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
ILGE + R + T+ YA+K L K ++K N+V +V ERD+++ D+ + VKLY
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 127 YSFQDKDNLYFVMDY 141
++FQD + LYF + Y
Sbjct: 99 FTFQDDEKLYFGLSY 113
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 33/50 (66%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGL 50
+K L K ++K N+V +V ERD+++ D+ + VKLY++FQ D + GL
Sbjct: 62 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL 111
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 142/323 (43%), Gaps = 70/323 (21%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFGEVTLVRKIDT----NHLYVMK----GS 592
G F V L R++ T+ Y +K + K + + R+ D +H + +K
Sbjct: 25 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 84
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
LYF + Y G+L+ + K G F+E RFY AE+ A+E +H G IHRD+KP+N
Sbjct: 85 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 144
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
IL++ D HI++TDFG +
Sbjct: 145 ILLNEDMHIQITDFGTAK----------------------------------------VL 164
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
SP ++ A+ VGT Y++PE+L + D W++G I+Y+++ G P
Sbjct: 165 SP----------ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 214
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASE----V 827
PF A K+I E P + P+ DL+ +L A KRLG E +
Sbjct: 215 PFRAGNEYLIFQKIIKLE--YDFP--EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 270
Query: 828 KAHPFFSNVDFEKGVRTLTPPHI 850
KAHPFF +V +E + TPP +
Sbjct: 271 KAHPFFESVTWE-NLHQQTPPKL 292
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
ILGE + R + T+ YA+K L K ++K N+V +V ERD+++ D+ + VKLY
Sbjct: 21 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 80
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
++FQD + LYF + Y +L+
Sbjct: 81 FTFQDDEKLYFGLSYAKNGELL 102
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
+K L K ++K N+V +V ERD+++ D+ + VKLY++FQ D + GL YA
Sbjct: 44 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-----SYAKN 98
Query: 61 ARVLKSI 67
+LK I
Sbjct: 99 GELLKYI 105
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 120 bits (300), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 142/323 (43%), Gaps = 70/323 (21%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFGEVTLVRKIDT----NHLYVMK----GS 592
G F V L R++ T+ Y +K + K + + R+ D +H + +K
Sbjct: 40 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 99
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
LYF + Y G+L+ + K G F+E RFY AE+ A+E +H G IHRD+KP+N
Sbjct: 100 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 159
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
IL++ D HI++TDFG +
Sbjct: 160 ILLNEDMHIQITDFGTAK----------------------------------------VL 179
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
SP ++ A+ VGT Y++PE+L + D W++G I+Y+++ G P
Sbjct: 180 SP----------ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 229
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASE----V 827
PF A K+I E P + P+ DL+ +L A KRLG E +
Sbjct: 230 PFRAGNEYLIFQKIIKLE--YDFP--EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 285
Query: 828 KAHPFFSNVDFEKGVRTLTPPHI 850
KAHPFF +V +E + TPP +
Sbjct: 286 KAHPFFESVTWE-NLHQQTPPKL 307
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
ILGE + R + T+ YA+K L K ++K N+V +V ERD+++ D+ + VKLY
Sbjct: 36 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 95
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
++FQD + LYF + Y +L+
Sbjct: 96 FTFQDDEKLYFGLSYAKNGELL 117
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
+K L K ++K N+V +V ERD+++ D+ + VKLY++FQ D + GL YA
Sbjct: 59 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-----SYAKN 113
Query: 61 ARVLKSI 67
+LK I
Sbjct: 114 GELLKYI 120
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 142/323 (43%), Gaps = 70/323 (21%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFGEVTLVRKIDT----NHLYVMK----GS 592
G F V L R++ T+ Y +K + K + + R+ D +H + +K
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
LYF + Y G+L+ + K G F+E RFY AE+ A+E +H G IHRD+KP+N
Sbjct: 103 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 162
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
IL++ D HI++TDFG +
Sbjct: 163 ILLNEDMHIQITDFGTAK----------------------------------------VL 182
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
SP ++ A+ VGT Y++PE+L + D W++G I+Y+++ G P
Sbjct: 183 SP----------ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 232
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASE----V 827
PF A K+I E P + P+ DL+ +L A KRLG E +
Sbjct: 233 PFRAGNEYLIFQKIIKLE--YDFP--EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 288
Query: 828 KAHPFFSNVDFEKGVRTLTPPHI 850
KAHPFF +V +E + TPP +
Sbjct: 289 KAHPFFESVTWEN-LHQQTPPKL 310
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
ILGE + R + T+ YA+K L K ++K N+V +V ERD+++ D+ + VKLY
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
++FQD + LYF + Y +L+
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELL 120
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
+K L K ++K N+V +V ERD+++ D+ + VKLY++FQ D + GL YA
Sbjct: 62 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-----SYAKN 116
Query: 61 ARVLKSI 67
+LK I
Sbjct: 117 GELLKYI 123
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 142/323 (43%), Gaps = 70/323 (21%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFGEVTLVRKIDT----NHLYVMK----GS 592
G F V L R++ T+ Y +K + K + + R+ D +H + +K
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
LYF + Y G+L+ + K G F+E RFY AE+ A+E +H G IHRD+KP+N
Sbjct: 103 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 162
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
IL++ D HI++TDFG +
Sbjct: 163 ILLNEDMHIQITDFGTAK----------------------------------------VL 182
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
SP ++ A+ VGT Y++PE+L + D W++G I+Y+++ G P
Sbjct: 183 SP----------ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 232
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASE----V 827
PF A K+I E P + P+ DL+ +L A KRLG E +
Sbjct: 233 PFRAGNEYLIFQKIIKLE--YDFP--EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 288
Query: 828 KAHPFFSNVDFEKGVRTLTPPHI 850
KAHPFF +V +E + TPP +
Sbjct: 289 KAHPFFESVTWEN-LHQQTPPKL 310
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
ILGE + R + T+ YA+K L K ++K N+V +V ERD+++ D+ + VKLY
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
++FQD + LYF + Y +L+
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELL 120
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
+K L K ++K N+V +V ERD+++ D+ + VKLY++FQ D + GL YA
Sbjct: 62 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-----SYAKN 116
Query: 61 ARVLKSI 67
+LK I
Sbjct: 117 GELLKYI 123
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 142/323 (43%), Gaps = 70/323 (21%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFGEVTLVRKIDT----NHLYVMK----GS 592
G F V L R++ T+ Y +K + K + + R+ D +H + +K
Sbjct: 41 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 100
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
LYF + Y G+L+ + K G F+E RFY AE+ A+E +H G IHRD+KP+N
Sbjct: 101 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 160
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
IL++ D HI++TDFG +
Sbjct: 161 ILLNEDMHIQITDFGTAK----------------------------------------VL 180
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
SP ++ A+ VGT Y++PE+L + D W++G I+Y+++ G P
Sbjct: 181 SP----------ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 230
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASE----V 827
PF A K+I E P + P+ DL+ +L A KRLG E +
Sbjct: 231 PFRAGNEYLIFQKIIKLE--YDFP--EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 286
Query: 828 KAHPFFSNVDFEKGVRTLTPPHI 850
KAHPFF +V +E + TPP +
Sbjct: 287 KAHPFFESVTWE-NLHQQTPPKL 308
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
ILGE + R + T+ YA+K L K ++K N+V +V ERD+++ D+ + VKLY
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
++FQD + LYF + Y +L+
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELL 118
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
+K L K ++K N+V +V ERD+++ D+ + VKLY++FQ D + GL YA
Sbjct: 60 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-----SYAKN 114
Query: 61 ARVLKSI 67
+LK I
Sbjct: 115 GELLKYI 121
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 120 bits (300), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 141/323 (43%), Gaps = 70/323 (21%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFGEVTLVRKIDT----NHLYVMK----GS 592
G F V L R++ T+ Y +K + K + + R+ D +H + +K
Sbjct: 44 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 103
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
LYF + Y G+L+ + K G F+E RFY AE+ A+E +H G IHRD+KP+N
Sbjct: 104 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 163
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
IL++ D HI++TDFG +
Sbjct: 164 ILLNEDMHIQITDFGTAK----------------------------------------VL 183
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
SP ++ A+ VGT Y++PE+L + D W++G I+Y+++ G P
Sbjct: 184 SP----------ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 233
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASE----V 827
PF A K+I E + P+ DL+ +L A KRLG E +
Sbjct: 234 PFRAGNEYLIFQKIIKLEYDF----PEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 289
Query: 828 KAHPFFSNVDFEKGVRTLTPPHI 850
KAHPFF +V +E + TPP +
Sbjct: 290 KAHPFFESVTWEN-LHQQTPPKL 311
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
ILGE + R + T+ YA+K L K ++K N+V +V ERD+++ D+ + VKLY
Sbjct: 40 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 99
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
++FQD + LYF + Y +L+
Sbjct: 100 FTFQDDEKLYFGLSYAKNGELL 121
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
+K L K ++K N+V +V ERD+++ D+ + VKLY++FQ D + GL YA
Sbjct: 63 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-----SYAKN 117
Query: 61 ARVLKSI 67
+LK I
Sbjct: 118 GELLKYI 124
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 119 bits (299), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 142/323 (43%), Gaps = 70/323 (21%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFGEVTLVRKIDT----NHLYVMK----GS 592
G F V L R++ T+ Y +K + K + + R+ D +H + +K
Sbjct: 41 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 100
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
LYF + Y G+L+ + K G F+E RFY AE+ A+E +H G IHRD+KP+N
Sbjct: 101 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 160
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
IL++ D HI++TDFG +
Sbjct: 161 ILLNEDMHIQITDFGTAK----------------------------------------VL 180
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
SP ++ A+ VGT Y++PE+L + D W++G I+Y+++ G P
Sbjct: 181 SP----------ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 230
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASE----V 827
PF A K+I E P + P+ DL+ +L A KRLG E +
Sbjct: 231 PFRAGNEYLIFQKIIKLE--YDFP--EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 286
Query: 828 KAHPFFSNVDFEKGVRTLTPPHI 850
KAHPFF +V +E + TPP +
Sbjct: 287 KAHPFFESVTWE-NLHQQTPPKL 308
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
ILGE + R + T+ YA+K L K ++K N+V +V ERD+++ D+ + VKLY
Sbjct: 37 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
++FQD + LYF + Y +L+
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELL 118
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
+K L K ++K N+V +V ERD+++ D+ + VKLY++FQ D + GL YA
Sbjct: 60 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-----SYAKN 114
Query: 61 ARVLKSI 67
+LK I
Sbjct: 115 GELLKYI 121
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 93/323 (28%), Positives = 142/323 (43%), Gaps = 70/323 (21%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFGEVTLVRKIDT----NHLYVMK----GS 592
G F V L R++ T+ Y +K + K + + R+ D +H + +K
Sbjct: 48 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFCFQ 107
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
LYF + Y G+L+ + K G F+E RFY AE+ A+E +H G IHRD+KP+N
Sbjct: 108 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 167
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
IL++ D HI++TDFG +
Sbjct: 168 ILLNEDMHIQITDFGTAK----------------------------------------VL 187
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
SP ++ A+ VGT Y++PE+L + D W++G I+Y+++ G P
Sbjct: 188 SP----------ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 237
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASE----V 827
PF A K+I E P + P+ DL+ +L A KRLG E +
Sbjct: 238 PFRAGNEYLIFQKIIKLE--YDFP--EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 293
Query: 828 KAHPFFSNVDFEKGVRTLTPPHI 850
KAHPFF +V +E + TPP +
Sbjct: 294 KAHPFFESVTWEN-LHQQTPPKL 315
Score = 63.5 bits (153), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
ILGE + R + T+ YA+K L K ++K N+V +V ERD+++ D+ + VKLY
Sbjct: 44 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 103
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
+ FQD + LYF + Y +L+
Sbjct: 104 FCFQDDEKLYFGLSYAKNGELL 125
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 5/67 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
+K L K ++K N+V +V ERD+++ D+ + VKLY+ FQ D + GL YA
Sbjct: 67 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFCFQDDEKLYFGL-----SYAKN 121
Query: 61 ARVLKSI 67
+LK I
Sbjct: 122 GELLKYI 128
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 119 bits (299), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 141/323 (43%), Gaps = 70/323 (21%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFGEVTLVRKIDT----NHLYVMK----GS 592
G F V L R++ T+ Y +K + K + + R+ D +H + +K
Sbjct: 43 GSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 102
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
LYF + Y G+L+ + K G F+E RFY AE+ A+E +H G IHRD+KP+N
Sbjct: 103 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 162
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
IL++ D HI++TDFG +
Sbjct: 163 ILLNEDMHIQITDFGTAK----------------------------------------VL 182
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
SP ++ A+ VGT Y++PE+L + D W++G I+Y+++ G P
Sbjct: 183 SP----------ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 232
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASE----V 827
PF A K+I E + P+ DL+ +L A KRLG E +
Sbjct: 233 PFRAGNEYLIFQKIIKLEYDF----PEKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 288
Query: 828 KAHPFFSNVDFEKGVRTLTPPHI 850
KAHPFF +V +E + TPP +
Sbjct: 289 KAHPFFESVTWEN-LHQQTPPKL 310
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
ILGE + R + T+ YA+K L K ++K N+V +V ERD+++ D+ + VKLY
Sbjct: 39 ILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 98
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
++FQD + LYF + Y +L+
Sbjct: 99 FTFQDDEKLYFGLSYAKNGELL 120
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
+K L K ++K N+V +V ERD+++ D+ + VKLY++FQ D + GL YA
Sbjct: 62 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-----SYAKN 116
Query: 61 ARVLKSI 67
+LK I
Sbjct: 117 GELLKYI 123
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 118 bits (296), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 92/323 (28%), Positives = 141/323 (43%), Gaps = 70/323 (21%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFGEVTLVRKIDT----NHLYVMK----GS 592
G F L R++ T+ Y +K + K + + R+ D +H + +K
Sbjct: 41 GSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQ 100
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
LYF + Y G+L+ + K G F+E RFY AE+ A+E +H G IHRD+KP+N
Sbjct: 101 DDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPEN 160
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
IL++ D HI++TDFG +
Sbjct: 161 ILLNEDMHIQITDFGTAK----------------------------------------VL 180
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
SP ++ A+ VGT Y++PE+L + D W++G I+Y+++ G P
Sbjct: 181 SP----------ESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLP 230
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASE----V 827
PF A K+I E P + P+ DL+ +L A KRLG E +
Sbjct: 231 PFRAGNEYLIFQKIIKLE--YDFP--EKFFPKARDLVEKLLVLDATKRLGCEEMEGYGPL 286
Query: 828 KAHPFFSNVDFEKGVRTLTPPHI 850
KAHPFF +V +E + TPP +
Sbjct: 287 KAHPFFESVTWE-NLHQQTPPKL 308
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 50/82 (60%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
ILGE + R + T+ YA+K L K ++K N+V +V ERD+++ D+ + VKLY
Sbjct: 37 ILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY 96
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
++FQD + LYF + Y +L+
Sbjct: 97 FTFQDDEKLYFGLSYAKNGELL 118
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 39/67 (58%), Gaps = 5/67 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQGDIFILVGLWVNTMEYALA 60
+K L K ++K N+V +V ERD+++ D+ + VKLY++FQ D + GL YA
Sbjct: 60 IKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTFQDDEKLYFGL-----SYAKN 114
Query: 61 ARVLKSI 67
+LK I
Sbjct: 115 GELLKYI 121
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 111 bits (277), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 93/345 (26%), Positives = 156/345 (45%), Gaps = 82/345 (23%)
Query: 527 IDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTI--YKCVGAFGEVTLVRKIDTN 584
++ +H +++ I K G FG+V +V+K DT +Y MK + KCV E VR +
Sbjct: 12 VNFDHFEILRAIGK--GSFGKVCIVQKNDTKKMYAMKYMNKQKCV----ERNEVRNV-FK 64
Query: 585 HLYVMKGSPH-------------NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
L +M+G H +++ V+D + GGDL L + F+E + +I EL
Sbjct: 65 ELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICEL 124
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A++ + IHRD+KPDNIL+D GH+ +TDF +
Sbjct: 125 VMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIA---------------------- 162
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLR--- 748
+M P E +Q T ++ GT Y+APE+
Sbjct: 163 AMLPRE--TQIT-----------------------------TMAGTKPYMAPEMFSSRKG 191
Query: 749 TGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADL 808
GY+ DWWS+GV YE+L G P+ +S ++ V +E+ + + + S E L
Sbjct: 192 AGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTV-VTYPSAWSQEMVSL 250
Query: 809 ILQLCT-GADKRLGKNASEVKAHPFFSNVDFEKGV-RTLTPPHIP 851
+ +L D+R + S+V+ P+ ++++++ + L P IP
Sbjct: 251 LKKLLEPNPDQRFSQ-LSDVQNFPYMNDINWDAVFQKRLIPGFIP 294
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 43/65 (66%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI 142
DT +YAMK + K ++RN+V +V E I+ ++ ++V L+YSFQD+++++ V+D +
Sbjct: 38 DTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLL 97
Query: 143 PGEKL 147
G L
Sbjct: 98 LGGDL 102
Score = 36.2 bits (82), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%), Gaps = 2/38 (5%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI--YKCV 488
F ++ IG G+FG+V +V+K DT +YAMK + KCV
Sbjct: 17 FEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCV 54
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 38/66 (57%), Gaps = 3/66 (4%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQG--DIFILVGLWV-NTMEY 57
MK + K ++RN+V +V E I+ ++ ++V L+YSFQ D+F++V L + + Y
Sbjct: 45 MKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRY 104
Query: 58 ALAARV 63
L V
Sbjct: 105 HLQQNV 110
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 107 bits (268), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 120/283 (42%), Gaps = 66/283 (23%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYKCV------GAFGEVTLVRKIDTNHLYVMKG---S 592
G F EV L + T L+ +K I K E+ ++RKI ++ ++ S
Sbjct: 32 TGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALEDIYES 91
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
P N+LY VM + GG+L +++KG + E A I ++ AV +H+MG +HRD+KP+N
Sbjct: 92 P-NHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPEN 150
Query: 653 ILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECR 709
+L D + I ++DFGL G+ D M +
Sbjct: 151 LLYYSQDEESKIMISDFGLSKM---------------EGKGDVMSTA------------- 182
Query: 710 CINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLV 769
GTP Y+APEVL + Y++ D WS+GVI Y +L
Sbjct: 183 -------------------------CGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLC 217
Query: 770 GSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQL 812
G PPF ++ +++ E P +S D I L
Sbjct: 218 GYPPFYDENDSKLFEQILKAEYEFDSPYWDDISDSAKDFIRNL 260
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 102/340 (30%), Positives = 152/340 (44%), Gaps = 75/340 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCV---GAFGEVTLVRK----IDTNH-----LYVMK 590
G FG+V L R +T LY +K + K V E T+ K + NH L+
Sbjct: 34 GSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCF 93
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKP 650
+P + L+FVM+++ GGDLM + K F+E ARFY AE+ A + F+H
Sbjct: 94 QTP-DRLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISA------LMFLH----- 141
Query: 651 DNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRC 710
D +I RD +KL + L DH + +G C
Sbjct: 142 DKGIIYRD--LKLDNVLL-----------------DHEGHCKLADFGMCKEGI----CNG 178
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
+ + + GTP+YIAPE+L Y DWW++GV+LYEML G
Sbjct: 179 VTTA------------------TFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCG 220
Query: 771 SPPFLANTSAETQYKVIN----WESCLHIPAEAQL-SPEGADLILQLCTGADKRLGKNAS 825
PF A + ++N + + LH A L S + ++L G+ + G++A
Sbjct: 221 HAPFEAENEDDLFEAILNDEVVYPTWLHEDATGILKSFMTKNPTMRL--GSLTQGGEHA- 277
Query: 826 EVKAHPFFSNVDFEK-GVRTLTPPHIPRIQNSMDTSNFDP 864
+ HPFF +D+ + R + PP PRI++ D SNFDP
Sbjct: 278 -ILRHPFFKEIDWAQLNHRQIEPPFRPRIKSREDVSNFDP 316
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNE-WVVKLYYSFQDKDNLYFV 138
R+ +T LYA+K L+K +L+ + V E+ IL+ A N ++ +L+ FQ D L+FV
Sbjct: 43 RVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFV 102
Query: 139 MDYIPGEKLI 148
M+++ G L+
Sbjct: 103 MEFVNGGDLM 112
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 5/58 (8%)
Query: 434 SQKESNYIRLK---RAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV 488
S KE N I + R +D FI++ +G G+FG+V L R +T LYA+K + K V
Sbjct: 5 SSKEGNGIGVNSSNRLGIDNFEFIRV--LGKGSFGKVMLARVKETGDLYAVKVLKKDV 60
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 101 bits (252), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 135/329 (41%), Gaps = 75/329 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGA-------FGEVTLVRKIDTNHLYVMKG---- 591
G FGEV + T Y +K I K EV L++K+D H +MK
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD--HPNIMKLFEIL 90
Query: 592 SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++ Y V + GG+L +IK+ F E A I ++ + +HK +HRD+KP+
Sbjct: 91 EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPE 150
Query: 652 NILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQEC 708
NIL+ ++D IK+ DFGL T F+ N+K G
Sbjct: 151 NILLESKEKDCDIKIIDFGLSTCFQ--QNTKMKDRIG----------------------- 185
Query: 709 RCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
T YIAPEV LR Y + CD WS GVILY +L
Sbjct: 186 ----------------------------TAYYIAPEV-LRGTYDEKCDVWSAGVILYILL 216
Query: 769 VGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVK 828
G+PPF + +V + +P +S + DLI ++ T L A++
Sbjct: 217 SGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLT-FHPSLRITATQCL 275
Query: 829 AHPFFSNVDFEKGVRTLTPPHIPRIQNSM 857
HP+ E T T +P ++++M
Sbjct: 276 EHPWIQKYSSE----TPTISDLPSLESAM 300
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 99.8 bits (247), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 86/304 (28%), Positives = 126/304 (41%), Gaps = 71/304 (23%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGA-------FGEVTLVRKIDTNHLYVMKG---- 591
G FGEV + T Y +K I K EV L++K+D H +MK
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD--HPNIMKLFEIL 90
Query: 592 SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++ Y V + GG+L +IK+ F E A I ++ + +HK +HRD+KP+
Sbjct: 91 EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPE 150
Query: 652 NILID---RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQEC 708
NIL++ +D IK+ DFGL T C
Sbjct: 151 NILLESKEKDCDIKIIDFGLST-------------------------------------C 173
Query: 709 RCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
N+ +K +GT YIAPEVL R Y + CD WS GVILY +L
Sbjct: 174 FQQNTKMK----------------DRIGTAYYIAPEVL-RGTYDEKCDVWSAGVILYILL 216
Query: 769 VGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVK 828
G+PPF + +V + +P +S + DLI ++ T L A++
Sbjct: 217 SGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLT-FHPSLRITATQCL 275
Query: 829 AHPF 832
HP+
Sbjct: 276 EHPW 279
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 90/327 (27%), Positives = 131/327 (40%), Gaps = 71/327 (21%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGA-------FGEVTLVRKIDTNHLYVMK----G 591
G +GEV L R T+ +K I K + EV +++ +D H +MK
Sbjct: 48 GAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLD--HPNIMKLYDFF 105
Query: 592 SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
N Y VM+ GG+L +I + F E A I ++ V +HK +HRD+KP+
Sbjct: 106 EDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIVHRDLKPE 165
Query: 652 NILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQEC 708
N+L+ ++D IK+ DFGL F
Sbjct: 166 NLLLESKEKDALIKIVDFGLSAVFE----------------------------------- 190
Query: 709 RCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
+Q+ + L GT YIAPEV LR Y + CD WS+GVIL+ +L
Sbjct: 191 -----------------NQKKMKERL-GTAYYIAPEV-LRKKYDEKCDVWSIGVILFILL 231
Query: 769 VGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVK 828
G PPF T E KV + P +S DLI Q+ D + +A +
Sbjct: 232 AGYPPFGGQTDQEILRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQ-FDSQRRISAQQAL 290
Query: 829 AHPFFSNVDFEKGVRTLTPPHIPRIQN 855
HP+ + +K P I+N
Sbjct: 291 EHPWIKEMCSKKESGIELPSLANAIEN 317
Score = 30.0 bits (66), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 27/98 (27%), Positives = 42/98 (42%), Gaps = 9/98 (9%)
Query: 452 MFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK-CVGAFGEVTLVRKIDTNHLYVMKT 510
M+ ++K +G GA+GEV L R T+ A+K I K V L+ ++ L
Sbjct: 38 MYQRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPN 97
Query: 511 IYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEV 548
I K F D + Y++ YK +F E+
Sbjct: 98 IMKLYDFFE--------DKRNYYLVMECYKGGELFDEI 127
Score = 29.6 bits (65), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 89 AMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGEKLI 148
A+K +RK V + + + E +L D+ ++KLY F+DK N Y VM+ G +L
Sbjct: 66 AIKIIRKTSVSTSSN-SKLLEEVAVLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELF 124
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 87/312 (27%), Positives = 127/312 (40%), Gaps = 71/312 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGA-------FGEVTLVRKIDTNHLYVMKG---- 591
G FGEV + T Y +K I K EV L++K+D H +MK
Sbjct: 33 GSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLD--HPNIMKLFEIL 90
Query: 592 SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++ Y V + GG+L +IK+ F E A I ++ + +HK +HRD+KP+
Sbjct: 91 EDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNIVHRDLKPE 150
Query: 652 NILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQEC 708
NIL+ ++D IK+ DFGL T F+ N+K G
Sbjct: 151 NILLESKEKDCDIKIIDFGLSTCFQ--QNTKMKDRIG----------------------- 185
Query: 709 RCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
T YIAPEV LR Y + CD WS GVILY +L
Sbjct: 186 ----------------------------TAYYIAPEV-LRGTYDEKCDVWSAGVILYILL 216
Query: 769 VGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVK 828
G+PPF + +V + +P +S + DLI ++ T L A++
Sbjct: 217 SGTPPFYGKNEYDILKRVETGKYAFDLPQWRTISDDAKDLIRKMLT-FHPSLRITATQCL 275
Query: 829 AHPFFSNVDFEK 840
HP+ E+
Sbjct: 276 EHPWIQKYSSEE 287
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 121/286 (42%), Gaps = 76/286 (26%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNL----- 597
G F EV LV++ T L+ +K I K AF + +L N + V+K H N+
Sbjct: 20 GAFSEVFLVKQRLTGKLFALKCIKKS-PAFRDSSL-----ENEIAVLKKIKHENIVTLED 73
Query: 598 --------YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIK 649
Y VM + GG+L ++++G++ E A I ++ AV+ +H+ G +HRD+K
Sbjct: 74 IYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRDLK 133
Query: 650 PDNILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQ 706
P+N+L + + I +TDFGL SK Q NG + GTPG
Sbjct: 134 PENLLYLTPEENSKIMITDFGL---------SKMEQ-NGIMST----------ACGTPG- 172
Query: 707 ECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 766
Y+APEVL + Y++ D WS+GVI Y
Sbjct: 173 ---------------------------------YVAPEVLAQKPYSKAVDCWSIGVITYI 199
Query: 767 MLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQL 812
+L G PPF T ++ K+ P +S D I L
Sbjct: 200 LLCGYPPFYEETESKLFEKIKEGYYEFESPFWDDISESAKDFICHL 245
Score = 36.2 bits (82), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 450 KSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAF------GEVTLVRKIDTN 503
+ FI ++ +G GAF EV LV++ T L+A+K I K AF E+ +++KI
Sbjct: 8 RKTFIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKS-PAFRDSSLENEIAVLKKIKHE 66
Query: 504 HLYVMKTIYK 513
++ ++ IY+
Sbjct: 67 NIVTLEDIYE 76
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 97.4 bits (241), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 88/154 (57%), Gaps = 12/154 (7%)
Query: 526 KIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGE-----VTLVRK 580
K+ N +K + K G FG+V LVR+ T Y MK + K V + VT R
Sbjct: 4 KVTMNDFDYLKLLGK--GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 61
Query: 581 I-DTNHLYVMK----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAV 635
+ +T H ++ H+ L FVM+Y GG+L L ++ +F E ARFY AE+ A+
Sbjct: 62 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 121
Query: 636 ESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
E +H ++RDIK +N+++D+DGHIK+TDFGLC
Sbjct: 122 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLC 155
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 9/136 (6%)
Query: 733 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESC 792
+ GTP Y+APEVL Y + DWW +GV++YEM+ G PF N E +++I E
Sbjct: 167 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY-NQDHERLFELILMEE- 224
Query: 793 LHIPAEAQLSPEGADLILQLCTGADK-RLG---KNASEVKAHPFFSNVDFEKGV-RTLTP 847
I LSPE L+ L K RLG +A EV H FF +++++ V + L P
Sbjct: 225 --IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLP 282
Query: 848 PHIPRIQNSMDTSNFD 863
P P++ + +DT FD
Sbjct: 283 PFKPQVTSEVDTRYFD 298
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
+LG+ T +R T YAMK LRK ++ +++VAH E +L + ++ L
Sbjct: 15 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 74
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
Y+FQ D L FVM+Y G +L
Sbjct: 75 YAFQTHDRLCFVMEYANGGELF 96
Score = 36.6 bits (83), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 445 RAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV 488
RAK+ + F +K +G G FG+V LVR+ T YAMK + K V
Sbjct: 2 RAKVTMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV 45
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQG-DIFILVGLWVNTMEYAL 59
MK LRK ++ +++VAH E +L + ++ L Y+FQ D V MEYA
Sbjct: 38 MKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV------MEYAN 91
Query: 60 AARVLKSILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRN 102
+ + E + R + A++ L DV+ R+
Sbjct: 92 GGELFFHLSRERVF-TEERARFYGAEIVSALEYLHSRDVVYRD 133
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 97.1 bits (240), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 88/154 (57%), Gaps = 12/154 (7%)
Query: 526 KIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGE-----VTLVRK 580
K+ N +K + K G FG+V LVR+ T Y MK + K V + VT R
Sbjct: 6 KVTMNDFDYLKLLGK--GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 63
Query: 581 I-DTNHLYVMK----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAV 635
+ +T H ++ H+ L FVM+Y GG+L L ++ +F E ARFY AE+ A+
Sbjct: 64 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 123
Query: 636 ESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
E +H ++RDIK +N+++D+DGHIK+TDFGLC
Sbjct: 124 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLC 157
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 72/135 (53%), Gaps = 9/135 (6%)
Query: 734 LVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCL 793
GTP Y+APEVL Y + DWW +GV++YEM+ G PF N E +++I E
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY-NQDHERLFELILMEE-- 226
Query: 794 HIPAEAQLSPEGADLILQLCTGADK-RLG---KNASEVKAHPFFSNVDFEKGV-RTLTPP 848
I LSPE L+ L K RLG +A EV H FF +++++ V + L PP
Sbjct: 227 -IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPP 285
Query: 849 HIPRIQNSMDTSNFD 863
P++ + +DT FD
Sbjct: 286 FKPQVTSEVDTRYFD 300
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
+LG+ T +R T YAMK LRK ++ +++VAH E +L + ++ L
Sbjct: 17 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 76
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
Y+FQ D L FVM+Y G +L
Sbjct: 77 YAFQTHDRLCFVMEYANGGELF 98
Score = 33.1 bits (74), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV 488
F +K +G G FG+V LVR+ T YAMK + K V
Sbjct: 12 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV 47
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQG-DIFILVGLWVNTMEYAL 59
MK LRK ++ +++VAH E +L + ++ L Y+FQ D V MEYA
Sbjct: 40 MKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV------MEYAN 93
Query: 60 AARVLKSILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRN 102
+ + E + R + A++ L DV+ R+
Sbjct: 94 GGELFFHLSRERVF-TEERARFYGAEIVSALEYLHSRDVVYRD 135
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 88/154 (57%), Gaps = 12/154 (7%)
Query: 526 KIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGE-----VTLVRK 580
K+ N +K + K G FG+V LVR+ T Y MK + K V + VT R
Sbjct: 1 KVTMNDFDYLKLLGK--GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 58
Query: 581 I-DTNHLYVMK----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAV 635
+ +T H ++ H+ L FVM+Y GG+L L ++ +F E ARFY AE+ A+
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 118
Query: 636 ESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
E +H ++RDIK +N+++D+DGHIK+TDFGLC
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLC 152
Score = 83.6 bits (205), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 72/135 (53%), Gaps = 9/135 (6%)
Query: 734 LVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCL 793
GTP Y+APEVL Y + DWW +GV++YEM+ G PF N E +++I E
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY-NQDHERLFELILMEE-- 221
Query: 794 HIPAEAQLSPEGADLILQLCTGADK-RLG---KNASEVKAHPFFSNVDFEKGV-RTLTPP 848
I LSPE L+ L K RLG +A EV H FF +++++ V + L PP
Sbjct: 222 -IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPP 280
Query: 849 HIPRIQNSMDTSNFD 863
P++ + +DT FD
Sbjct: 281 FKPQVTSEVDTRYFD 295
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
+LG+ T +R T YAMK LRK ++ +++VAH E +L + ++ L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
Y+FQ D L FVM+Y G +L
Sbjct: 72 YAFQTHDRLCFVMEYANGGELF 93
Score = 33.1 bits (74), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV 488
F +K +G G FG+V LVR+ T YAMK + K V
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV 42
Score = 32.7 bits (73), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQG-DIFILVGLWVNTMEYAL 59
MK LRK ++ +++VAH E +L + ++ L Y+FQ D V MEYA
Sbjct: 35 MKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV------MEYAN 88
Query: 60 AARVLKSILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRN 102
+ + E + R + A++ L DV+ R+
Sbjct: 89 GGELFFHLSRERVF-TEERARFYGAEIVSALEYLHSRDVVYRD 130
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 97.1 bits (240), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 88/154 (57%), Gaps = 12/154 (7%)
Query: 526 KIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGE-----VTLVRK 580
K+ N +K + K G FG+V LVR+ T Y MK + K V + VT R
Sbjct: 1 KVTMNDFDYLKLLGK--GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 58
Query: 581 I-DTNHLYVMK----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAV 635
+ +T H ++ H+ L FVM+Y GG+L L ++ +F E ARFY AE+ A+
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 118
Query: 636 ESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
E +H ++RDIK +N+++D+DGHIK+TDFGLC
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLC 152
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 9/136 (6%)
Query: 733 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESC 792
+ GTP Y+APEVL Y + DWW +GV++YEM+ G PF N E +++I E
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY-NQDHERLFELILMEE- 221
Query: 793 LHIPAEAQLSPEGADLILQLCTGADK-RLG---KNASEVKAHPFFSNVDFEKGV-RTLTP 847
I LSPE L+ L K RLG +A EV H FF +++++ V + L P
Sbjct: 222 --IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLP 279
Query: 848 PHIPRIQNSMDTSNFD 863
P P++ + +DT FD
Sbjct: 280 PFKPQVTSEVDTRYFD 295
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
+LG+ T +R T YAMK LRK ++ +++VAH E +L + ++ L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
Y+FQ D L FVM+Y G +L
Sbjct: 72 YAFQTHDRLCFVMEYANGGELF 93
Score = 33.1 bits (74), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQG-DIFILVGLWVNTMEYAL 59
MK LRK ++ +++VAH E +L + ++ L Y+FQ D V MEYA
Sbjct: 35 MKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV------MEYAN 88
Query: 60 AARVLKSILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRN 102
+ + E + R + A++ L DV+ R+
Sbjct: 89 GGELFFHLSRERVF-TEERARFYGAEIVSALEYLHSRDVVYRD 130
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV 488
F +K +G G FG+V LVR+ T YAMK + K V
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV 42
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 88/154 (57%), Gaps = 12/154 (7%)
Query: 526 KIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGE-----VTLVRK 580
K+ N +K + K G FG+V LVR+ T Y MK + K V + VT R
Sbjct: 1 KVTMNDFDYLKLLGK--GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 58
Query: 581 I-DTNHLYVMK----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAV 635
+ +T H ++ H+ L FVM+Y GG+L L ++ +F E ARFY AE+ A+
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 118
Query: 636 ESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
E +H ++RDIK +N+++D+DGHIK+TDFGLC
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLC 152
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 72/135 (53%), Gaps = 9/135 (6%)
Query: 734 LVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCL 793
GTP Y+APEVL Y + DWW +GV++YEM+ G PF N E +++I E
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY-NQDHERLFELILMEE-- 221
Query: 794 HIPAEAQLSPEGADLILQLCTGADK-RLG---KNASEVKAHPFFSNVDFEKGV-RTLTPP 848
I LSPE L+ L K RLG +A EV H FF +++++ V + L PP
Sbjct: 222 -IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPP 280
Query: 849 HIPRIQNSMDTSNFD 863
P++ + +DT FD
Sbjct: 281 FKPQVTSEVDTRYFD 295
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
+LG+ T +R T YAMK LRK ++ +++VAH E +L + ++ L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
Y+FQ D L FVM+Y G +L
Sbjct: 72 YAFQTHDRLCFVMEYANGGELF 93
Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV 488
F +K +G G FG+V LVR+ T YAMK + K V
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV 42
Score = 32.7 bits (73), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQG-DIFILVGLWVNTMEYAL 59
MK LRK ++ +++VAH E +L + ++ L Y+FQ D V MEYA
Sbjct: 35 MKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV------MEYAN 88
Query: 60 AARVLKSILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRN 102
+ + E + R + A++ L DV+ R+
Sbjct: 89 GGELFFHLSRERVF-TEERARFYGAEIVSALEYLHSRDVVYRD 130
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 88/154 (57%), Gaps = 12/154 (7%)
Query: 526 KIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGE-----VTLVRK 580
K+ N +K + K G FG+V LVR+ T Y MK + K V + VT R
Sbjct: 1 KVTMNDFDYLKLLGK--GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 58
Query: 581 I-DTNHLYVMK----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAV 635
+ +T H ++ H+ L FVM+Y GG+L L ++ +F E ARFY AE+ A+
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 118
Query: 636 ESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
E +H ++RDIK +N+++D+DGHIK+TDFGLC
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLC 152
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 72/135 (53%), Gaps = 9/135 (6%)
Query: 734 LVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCL 793
GTP Y+APEVL Y + DWW +GV++YEM+ G PF N E +++I E
Sbjct: 165 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY-NQDHERLFELILMEE-- 221
Query: 794 HIPAEAQLSPEGADLILQLCTGADK-RLG---KNASEVKAHPFFSNVDFEKGV-RTLTPP 848
I LSPE L+ L K RLG +A EV H FF +++++ V + L PP
Sbjct: 222 -IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLPP 280
Query: 849 HIPRIQNSMDTSNFD 863
P++ + +DT FD
Sbjct: 281 FKPQVTSEVDTRYFD 295
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
+LG+ T +R T YAMK LRK ++ +++VAH E +L + ++ L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
Y+FQ D L FVM+Y G +L
Sbjct: 72 YAFQTHDRLCFVMEYANGGELF 93
Score = 33.1 bits (74), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQG-DIFILVGLWVNTMEYAL 59
MK LRK ++ +++VAH E +L + ++ L Y+FQ D V MEYA
Sbjct: 35 MKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV------MEYAN 88
Query: 60 AARVLKSILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRN 102
+ + E + R + A++ L DV+ R+
Sbjct: 89 GGELFFHLSRERVF-TEERARFYGAEIVSALEYLHSRDVVYRD 130
Score = 32.7 bits (73), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV 488
F +K +G G FG+V LVR+ T YAMK + K V
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV 42
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 105/378 (27%), Positives = 152/378 (40%), Gaps = 97/378 (25%)
Query: 528 DTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG---EVTLVRKIDTN 584
D N L V+ G FG+V L + T+ LY +K + K V E T+V K
Sbjct: 21 DFNFLMVLGK-----GSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEK---- 71
Query: 585 HLYVMKGSP------------HNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELT 632
+ + G P + LYFVM+Y+ GGDLM + + G F+EP A FY AE+
Sbjct: 72 RVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIA 131
Query: 633 CAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDS 692
+ + G +I RD +KL + L +S+ + D G
Sbjct: 132 IGLFFLQSKG-----------IIYRD--LKLDNVML--------DSEGHIKIADFG---- 166
Query: 693 MEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYT 752
M W T C GTP+YIAPE++ Y
Sbjct: 167 MCKENIWDGVTTKXFC---------------------------GTPDYIAPEIIAYQPYG 199
Query: 753 QLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQL 812
+ DWW+ GV+LYEML G PF E ++ ++ +S E + L
Sbjct: 200 KSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH----NVAYPKSMSKEAVAICKGL 255
Query: 813 CTG-ADKRLG---KNASEVKAHPFFSNVDFEKGVRT-LTPPHIPRIQNSMDTSNFD---- 863
T KRLG + ++K H FF +D+EK R + PP+ P+ + NFD
Sbjct: 256 MTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPPYKPK-ACGRNAENFDRFFT 314
Query: 864 -------PVDPDKLRNSD 874
P D + +RN D
Sbjct: 315 RHPPVLXPPDQEVIRNID 332
Score = 43.9 bits (102), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILA-EADNEWVVKLYYSFQDKDNLYFVMDYI 142
T+ LYA+K L+K V++ + V E+ +LA ++ +L+ FQ D LYFVM+Y+
Sbjct: 44 TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYV 103
Query: 143 PGEKLI 148
G L+
Sbjct: 104 NGGDLM 109
Score = 29.6 bits (65), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 26/44 (59%)
Query: 445 RAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV 488
R +M + F + +G G+FG+V L + T+ LYA+K + K V
Sbjct: 14 RDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILKKDV 57
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 96.7 bits (239), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 60/154 (38%), Positives = 88/154 (57%), Gaps = 12/154 (7%)
Query: 526 KIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGE-----VTLVRK 580
K+ N +K + K G FG+V LVR+ T Y MK + K V + VT R
Sbjct: 1 KVTMNDFDYLKLLGK--GTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRV 58
Query: 581 I-DTNHLYVMK----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAV 635
+ +T H ++ H+ L FVM+Y GG+L L ++ +F E ARFY AE+ A+
Sbjct: 59 LQNTRHPFLTALKYAFQTHDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSAL 118
Query: 636 ESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
E +H ++RDIK +N+++D+DGHIK+TDFGLC
Sbjct: 119 EYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLC 152
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 51/136 (37%), Positives = 73/136 (53%), Gaps = 9/136 (6%)
Query: 733 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESC 792
+ GTP Y+APEVL Y + DWW +GV++YEM+ G PF N E +++I E
Sbjct: 164 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY-NQDHERLFELILMEE- 221
Query: 793 LHIPAEAQLSPEGADLILQLCTGADK-RLG---KNASEVKAHPFFSNVDFEKGV-RTLTP 847
I LSPE L+ L K RLG +A EV H FF +++++ V + L P
Sbjct: 222 --IRFPRTLSPEAKSLLAGLLKKDPKQRLGGGPSDAKEVMEHRFFLSINWQDVVQKKLLP 279
Query: 848 PHIPRIQNSMDTSNFD 863
P P++ + +DT FD
Sbjct: 280 PFKPQVTSEVDTRYFD 295
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
+LG+ T +R T YAMK LRK ++ +++VAH E +L + ++ L
Sbjct: 12 LLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALK 71
Query: 127 YSFQDKDNLYFVMDYIPGEKLI 148
Y+FQ D L FVM+Y G +L
Sbjct: 72 YAFQTHDRLCFVMEYANGGELF 93
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 8/103 (7%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQG-DIFILVGLWVNTMEYAL 59
MK LRK ++ +++VAH E +L + ++ L Y+FQ D V MEYA
Sbjct: 35 MKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAFQTHDRLCFV------MEYAN 88
Query: 60 AARVLKSILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRN 102
+ + E + R + A++ L DV+ R+
Sbjct: 89 GGELFFHLSRERVF-TEERARFYGAEIVSALEYLHSRDVVYRD 130
Score = 32.7 bits (73), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 22/36 (61%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV 488
F +K +G G FG+V LVR+ T YAMK + K V
Sbjct: 7 FDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEV 42
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 96.3 bits (238), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 109/277 (39%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 81
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G++ L K F+E YI EL
Sbjct: 82 FHDATRV-------------------YLILEYAPRGEVYKELQKLSKFDEQRTATYITEL 122
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 158
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P +L GT +Y+ PE++ +
Sbjct: 159 -------WSVHAPSSR-----------------------RTTLCGTLDYLPPEMIEGRMH 188
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 224
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 79 YGYFHDATRV 88
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ + A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 37 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 96
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 96.3 bits (238), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 108/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 81
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G++ L K F+E YI EL
Sbjct: 82 FHDATRV-------------------YLILEYAPRGEVYKELQKLSKFDEQRTATYITEL 122
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 158
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P L GT +Y+ PE++ +
Sbjct: 159 -------WSVHAPSSR-----------------------RXXLXGTLDYLPPEMIEGRMH 188
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 224
Score = 32.7 bits (73), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 79 YGYFHDATRV 88
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ + A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 37 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 96
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 95.9 bits (237), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 108/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 36 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 93
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 94 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 134
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 135 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 170
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P +L GT +Y+ PE++ +
Sbjct: 171 -------WSVHAPSSR-----------------------RTTLCGTLDYLPPEMIEGRMH 200
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 201 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 236
Score = 33.1 bits (74), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 31 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 90
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 91 YGYFHDATRV 100
Score = 30.4 bits (67), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 87 LYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 52 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 108
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 95.5 bits (236), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 108/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 45 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 102
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 103 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 143
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 144 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 179
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P +L GT +Y+ PE++ +
Sbjct: 180 -------WSVHAPSSR-----------------------RTTLCGTLDYLPPEMIEGRMH 209
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 245
Score = 33.1 bits (74), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 100 YGYFHDATRV 109
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 139
R + + A+K L KA + K ++ E +I + + +++LY F D +Y ++
Sbjct: 54 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 113
Query: 140 DYIP 143
+Y P
Sbjct: 114 EYAP 117
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 107/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 45 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 102
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 103 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 143
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 144 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 179
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P L GT +Y+ PE++ +
Sbjct: 180 -------WSVHAPSSR-----------------------RDDLCGTLDYLPPEMIEGRMH 209
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 210 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 245
Score = 33.5 bits (75), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 40 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 100 YGYFHDATRV 109
Score = 30.4 bits (67), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 32/64 (50%)
Query: 80 RLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVM 139
R + + A+K L KA + K ++ E +I + + +++LY F D +Y ++
Sbjct: 54 REKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLIL 113
Query: 140 DYIP 143
+Y P
Sbjct: 114 EYAP 117
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 95.1 bits (235), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 88/306 (28%), Positives = 126/306 (41%), Gaps = 74/306 (24%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCV-------GAF-GEVTLVRKIDTNHLYVMK---- 590
G +GEV L + T +K I K GA EV +++++D H +MK
Sbjct: 32 GAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD--HPNIMKLYEF 89
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKP 650
N Y VM+ GG+L +I + F E A + ++ +HK +HRD+KP
Sbjct: 90 FEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKP 149
Query: 651 DNILID---RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
+N+L++ RD IK+ DFGL S +++ G +
Sbjct: 150 ENLLLESKSRDALIKIVDFGL---------SAHFEVGGKMKER----------------- 183
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 767
+GT YIAPEVL R Y + CD WS GVILY +
Sbjct: 184 ---------------------------LGTAYYIAPEVL-RKKYDEKCDVWSCGVILYIL 215
Query: 768 LVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLI-LQLCTGADKRLGKNASE 826
L G PPF T E +V + P Q+S E L+ L L KR+ +A E
Sbjct: 216 LCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRI--SAEE 273
Query: 827 VKAHPF 832
HP+
Sbjct: 274 ALNHPW 279
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 89 AMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGEKLI 148
A+K ++K+ V + + E +L + D+ ++KLY F+DK N Y VM+ G +L
Sbjct: 50 AIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELF 109
Score = 30.0 bits (66), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 23/122 (18%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKC-------VGA-FGEVTLVRKIDTNH 504
+ ++K +G GA+GEV L + T A+K I K GA EV +++++D H
Sbjct: 23 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD--H 80
Query: 505 LYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKI-DTNHLYVMK 563
+MK +Y+ F E D + Y++ +Y+ +F E+ L +K + + +MK
Sbjct: 81 PNIMK-LYE----FFE-------DKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 128
Query: 564 TI 565
+
Sbjct: 129 QV 130
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 108/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 20 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 77
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 78 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 118
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 119 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 154
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P +L GT +Y+ PE++ +
Sbjct: 155 -------WSVHAPSSR-----------------------RDTLCGTLDYLPPEMIEGRMH 184
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 220
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 75 YGYFHDATRV 84
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ + A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 33 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 92
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 94.7 bits (234), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 55/146 (37%), Positives = 83/146 (56%), Gaps = 12/146 (8%)
Query: 534 VMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTI-------YKCVGAFGEVTLVRKIDTNHL 586
+++T+ G FG V L+R Y MK + K V + L+ I T+
Sbjct: 10 ILRTL--GTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPF 67
Query: 587 YV-MKGSPHN--NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGF 643
+ M G+ + ++ +MDYI GG+L SLL K F P+A+FY AE+ A+E +H
Sbjct: 68 IIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALEYLHSKDI 127
Query: 644 IHRDIKPDNILIDRDGHIKLTDFGLC 669
I+RD+KP+NIL+D++GHIK+TDFG
Sbjct: 128 IYRDLKPENILLDKNGHIKITDFGFA 153
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 81/140 (57%), Gaps = 10/140 (7%)
Query: 730 LAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINW 789
+ + L GTP+YIAPEV+ Y + DWWS G+++YEML G PF + + +T K++N
Sbjct: 159 VTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA 218
Query: 790 ESCLHIPAEAQLSPEGADLILQLCT-GADKRLG--KNASE-VKAHPFFSNVDFEKGV-RT 844
E L P + + DL+ +L T +RLG +N +E VK HP+F V +EK + R
Sbjct: 219 E--LRFP--PFFNEDVKDLLSRLITRDLSQRLGNLQNGTEDVKNHPWFKEVVWEKLLSRN 274
Query: 845 LTPPHIPRIQNSM-DTSNFD 863
+ P+ P IQ DTS FD
Sbjct: 275 IETPYEPPIQQGQGDTSQFD 294
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%)
Query: 56 EYALAARVLKSILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILA 115
+Y+L + LG + + IR YAMK L+K V++ QV H ER +L+
Sbjct: 2 KYSLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLS 61
Query: 116 EADNEWVVKLYYSFQDKDNLYFVMDYIPGEKLI 148
+ ++++++ +FQD ++ +MDYI G +L
Sbjct: 62 IVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELF 94
Score = 30.4 bits (67), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 13/41 (31%), Positives = 26/41 (63%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L+K V++ QV H ER +L+ + ++++++ +FQ
Sbjct: 36 MKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTFQ 76
Score = 30.0 bits (66), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 13/36 (36%), Positives = 20/36 (55%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV 488
F ++ +G G+FG V L+R YAMK + K +
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKKEI 43
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 108/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 79
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 80 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 156
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P +L GT +Y+ PE++ +
Sbjct: 157 -------WSVHAPSSR-----------------------RTTLCGTLDYLPPEMIEGRMH 186
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 222
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 77 YGYFHDATRV 86
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ + A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 35 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 94
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 108/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 81
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 82 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 122
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 158
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P +L GT +Y+ PE++ +
Sbjct: 159 -------WSVHAPSSR-----------------------RTTLCGTLDYLPPEMIEGRMH 188
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 224
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 79 YGYFHDATRV 88
Score = 30.8 bits (68), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ + A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 37 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 96
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 83/147 (56%), Gaps = 13/147 (8%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGS- 592
G FG V LV+ ++ + Y MK + K E +++ ++ L ++ S
Sbjct: 72 TGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF 131
Query: 593 -PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
++NLY VM+Y+ GG++ S L + G F EP ARFY A++ E +H + I+RD+KP+
Sbjct: 132 KDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPE 191
Query: 652 NILIDRDGHIKLTDFGLC---TGFRWT 675
N+LID+ G+I++TDFG G WT
Sbjct: 192 NLLIDQQGYIQVTDFGFAKRVKGATWT 218
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 81/144 (56%), Gaps = 9/144 (6%)
Query: 733 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESC 792
+L GTP Y+APE++L GY + DWW++GV++YEM G PPF A+ + K+++
Sbjct: 218 TLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVS--GK 275
Query: 793 LHIPAEAQLSPEGADLILQLC-TGADKRLG--KNA-SEVKAHPFFSNVDFEKGV-RTLTP 847
+ P + S + DL+ L KR G KN +++K H +F+ D+ R +
Sbjct: 276 VRFP--SHFSSDLKDLLRNLLQVDLTKRFGNLKNGVNDIKNHKWFATTDWIAIYQRKVEA 333
Query: 848 PHIPRIQNSMDTSNFDPVDPDKLR 871
P IP+ + DTSNFD + +++R
Sbjct: 334 PFIPKFKGPGDTSNFDDYEEEEIR 357
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 85 NHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPG 144
NH YAMK L K V+K Q+ H E+ IL + ++VKL +SF+D NLY VM+Y+ G
Sbjct: 88 NH-YAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAG 146
Query: 145 EKLI 148
++
Sbjct: 147 GEMF 150
Score = 33.9 bits (76), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 17/41 (41%), Positives = 28/41 (68%), Gaps = 2/41 (4%)
Query: 446 AKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
A++D+ F +IK +G G+FG V LV+ ++ + YAMK + K
Sbjct: 59 AQLDQ--FDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDK 97
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L K V+K Q+ H E+ IL + ++VKL +SF+
Sbjct: 92 MKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFK 132
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 107/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 81
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 82 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 122
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 158
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P +L GT +Y+ PE + +
Sbjct: 159 -------WSVHAPSSR-----------------------RTTLCGTLDYLPPEXIEGRXH 188
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 224
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 79 YGYFHDATRV 88
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 87 LYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 40 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 96
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 107/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 21 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 78
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 79 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 119
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 120 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 155
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P L GT +Y+ PE++ +
Sbjct: 156 -------WSVHAPSSR-----------------------RXXLCGTLDYLPPEMIEGRMH 185
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 221
Score = 32.7 bits (73), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 76 YGYFHDATRV 85
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ + A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 34 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 93
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 126/323 (39%), Gaps = 88/323 (27%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 23 GKFGNVYLARERQSKFILALKVLFKTQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 80
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 81 FHDATRV-------------------YLILEYAPLGTVYRELQKLSRFDEQRTATYITEL 121
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ +G +K+ DFG
Sbjct: 122 ANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFG------------------------ 157
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P +L GT +Y+ PE++ +
Sbjct: 158 -------WSVHAPSSR-----------------------RDTLCGTLDYLPPEMIEGRMH 187
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGA-DLIL 810
+ D WS+GV+ YE LVG PPF A+T ET ++ E EGA DLI
Sbjct: 188 DEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTF-----PDFVTEGARDLIS 242
Query: 811 QLCT-GADKRLGKNASEVKAHPF 832
+L A +RL +EV HP+
Sbjct: 243 RLLKHNASQRL--TLAEVLEHPW 263
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 94.0 bits (232), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 87/323 (26%), Positives = 126/323 (39%), Gaps = 88/323 (27%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 23 GKFGNVYLARERQSKFILALKVLFKTQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 80
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 81 FHDATRV-------------------YLILEYAPLGTVYRELQKLSRFDEQRTATYITEL 121
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ +G +K+ DFG
Sbjct: 122 ANALSYCHSKRVIHRDIKPENLLLGSNGELKIADFG------------------------ 157
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P +L GT +Y+ PE++ +
Sbjct: 158 -------WSVHAPSSR-----------------------RTTLCGTLDYLPPEMIEGRMH 187
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGA-DLIL 810
+ D WS+GV+ YE LVG PPF A+T ET ++ E EGA DLI
Sbjct: 188 DEKVDLWSLGVLCYEFLVGMPPFEAHTYQETYRRISRVEFTF-----PDFVTEGARDLIS 242
Query: 811 QLCT-GADKRLGKNASEVKAHPF 832
+L A +RL +EV HP+
Sbjct: 243 RLLKHNASQRL--TLAEVLEHPW 263
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 108/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 20 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 77
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 78 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 118
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 119 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 154
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P +L GT +Y+ PE++ +
Sbjct: 155 -------WSCHAPSSR-----------------------RTTLSGTLDYLPPEMIEGRMH 184
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 220
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 75 YGYFHDATRV 84
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 87 LYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 36 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 92
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 108/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 79
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 80 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 156
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P +L GT +Y+ PE++ +
Sbjct: 157 -------WSVHAPSSR-----------------------RAALCGTLDYLPPEMIEGRMH 186
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 222
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 77 YGYFHDATRV 86
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ + A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 35 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 94
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 108/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 76
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 77 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 153
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P +L GT +Y+ PE++ +
Sbjct: 154 -------WSVHAPSSR-----------------------RTTLCGTLDYLPPEMIEGRMH 183
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 219
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 74 YGYFHDATRV 83
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ + A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 32 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/270 (28%), Positives = 113/270 (41%), Gaps = 65/270 (24%)
Query: 574 EVTLVRKIDTN-HLYVMKGSPHNNLYF--VMDYIPGGDLMSLLIKKGIFEEPLARFYIAE 630
EV ++RK+ + ++ +K + N +F V D + G+L L +K E R +
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 631 LTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQ 690
L + ++HK+ +HRD+KP+NIL+D D +IKLTDFG
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS--------------------- 171
Query: 691 DSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL--- 747
Q PG++ R S+ GTP+Y+APE++
Sbjct: 172 ---------CQLDPGEKLR-----------------------SVCGTPSYLAPEIIECSM 199
Query: 748 ---RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPE 804
GY + D WS GVI+Y +L GSPPF +++ P S
Sbjct: 200 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDT 259
Query: 805 GADLILQ-LCTGADKRLGKNASEVKAHPFF 833
DL+ + L KR A E AHPFF
Sbjct: 260 VKDLVSRFLVVQPQKRY--TAEEALAHPFF 287
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 94.0 bits (232), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 107/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 20 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 77
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 78 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 118
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 119 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 154
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P L GT +Y+ PE++ +
Sbjct: 155 -------WSVHAPSSR-----------------------RTDLCGTLDYLPPEMIEGRMH 184
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 185 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 220
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 15 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 75 YGYFHDATRV 84
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ + A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 33 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 92
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 107/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 24 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 81
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 82 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 122
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 123 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 158
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P L GT +Y+ PE++ +
Sbjct: 159 -------WSVHAPSSR-----------------------RTDLCGTLDYLPPEMIEGRMH 188
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 189 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 224
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 19 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 79 YGYFHDATRV 88
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ + A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 37 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 96
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 125/297 (42%), Gaps = 62/297 (20%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHNN--LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
E+++ R + H+ G +N ++ V++ L+ L ++ EP AR+Y+ ++
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 126
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
+ +H+ IHRD+K N+ ++ D +K+ DFGL T + K
Sbjct: 127 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK------------ 174
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
+L GTPNYIAPEVL + G+
Sbjct: 175 ----------------------------------------KTLCGTPNYIAPEVLSKKGH 194
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ 811
+ D WS+G I+Y +LVG PPF + ET ++ E IP ++P A LI +
Sbjct: 195 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE--YSIP--KHINPVAASLIQK 250
Query: 812 LCTGADKRLGKNASEVKAHPFFSN--VDFEKGVRTLT-PPHIPRIQNSMDTSNFDPV 865
+ D +E+ FF++ + + LT PP +S+D SN P+
Sbjct: 251 MLQ-TDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAPSSLDPSNRKPL 306
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 93.6 bits (231), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 107/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 76
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 77 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 153
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P L GT +Y+ PE++ +
Sbjct: 154 -------WSVHAPSSR-----------------------RTELCGTLDYLPPEMIEGRMH 183
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 219
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 74 YGYFHDATRV 83
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ + A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 32 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 116/281 (41%), Gaps = 64/281 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFG----EVTLVRKIDTNHLYVMKG--SPH 594
G F EV L T L +K I K G G E+ ++ KI ++ +
Sbjct: 29 GAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESG 88
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
+LY +M + GG+L +++KG + E A I ++ AV+ +H +G +HRD+KP+N+L
Sbjct: 89 GHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLL 148
Query: 655 ---IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCI 711
+D D I ++DFGL D G S + GTPG
Sbjct: 149 YYSLDEDSKIMISDFGL-------------SKMEDPGSVLST------ACGTPG------ 183
Query: 712 NSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGS 771
Y+APEVL + Y++ D WS+GVI Y +L G
Sbjct: 184 ----------------------------YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 772 PPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQL 812
PPF A+ +++ E P +S D I L
Sbjct: 216 PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHL 256
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 108/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 76
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 77 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 153
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P +L GT +Y+ PE++ +
Sbjct: 154 -------WSVHAPSSR-----------------------RAALCGTLDYLPPEMIEGRMH 183
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 219
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 74 YGYFHDATRV 83
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ + A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 32 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 107/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 76
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 77 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 153
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P L GT +Y+ PE++ +
Sbjct: 154 -------WSVHAPSSR-----------------------RTDLCGTLDYLPPEMIEGRMH 183
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 219
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 74 YGYFHDATRV 83
Score = 30.4 bits (67), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ + A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 32 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 93.2 bits (230), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 107/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 76
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 77 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 153
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P L GT +Y+ PE++ +
Sbjct: 154 -------WSVHAPSSR-----------------------RTDLCGTLDYLPPEMIEGRMH 183
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 219
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 74 YGYFHDATRV 83
Score = 30.8 bits (68), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ + A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 32 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 116/281 (41%), Gaps = 64/281 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFG----EVTLVRKIDTNHLYVMKG--SPH 594
G F EV L T L +K I K G G E+ ++ KI ++ +
Sbjct: 29 GAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESG 88
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
+LY +M + GG+L +++KG + E A I ++ AV+ +H +G +HRD+KP+N+L
Sbjct: 89 GHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLL 148
Query: 655 ---IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCI 711
+D D I ++DFGL D G S + GTPG
Sbjct: 149 YYSLDEDSKIMISDFGL-------------SKMEDPGSVLST------ACGTPG------ 183
Query: 712 NSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGS 771
Y+APEVL + Y++ D WS+GVI Y +L G
Sbjct: 184 ----------------------------YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 772 PPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQL 812
PPF A+ +++ E P +S D I L
Sbjct: 216 PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHL 256
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 108/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 79
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 80 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 156
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P +L GT +Y+ PE++ +
Sbjct: 157 -------WSVHAPSSR-----------------------RTTLCGTLDYLPPEMIEGRMH 186
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 222
Score = 32.0 bits (71), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 77 YGYFHDATRV 86
Score = 30.8 bits (68), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ + A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 35 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 94
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 108/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 18 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 75
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 76 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 116
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 117 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 152
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P +L GT +Y+ PE++ +
Sbjct: 153 -------WSVHAPSSR-----------------------RTTLCGTLDYLPPEMIEGRMH 182
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 183 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 218
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 13 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 72
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 73 YGYFHDATRV 82
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ + A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 31 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 90
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 93.2 bits (230), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 125/297 (42%), Gaps = 62/297 (20%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHNN--LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
E+++ R + H+ G +N ++ V++ L+ L ++ EP AR+Y+ ++
Sbjct: 71 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 130
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
+ +H+ IHRD+K N+ ++ D +K+ DFGL T + K
Sbjct: 131 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK------------ 178
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
+L GTPNYIAPEVL + G+
Sbjct: 179 ----------------------------------------KTLCGTPNYIAPEVLSKKGH 198
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ 811
+ D WS+G I+Y +LVG PPF + ET ++ E IP ++P A LI +
Sbjct: 199 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE--YSIP--KHINPVAASLIQK 254
Query: 812 LCTGADKRLGKNASEVKAHPFFSN--VDFEKGVRTLT-PPHIPRIQNSMDTSNFDPV 865
+ D +E+ FF++ + + LT PP +S+D SN P+
Sbjct: 255 MLQ-TDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAPSSLDPSNRKPL 310
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/282 (27%), Positives = 116/282 (41%), Gaps = 64/282 (22%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYKCV--GAFG----EVTLVRKIDTNHLYVMKG--SP 593
G F EV L T L +K I K G G E+ ++ KI ++ +
Sbjct: 28 TGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIYES 87
Query: 594 HNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
+LY +M + GG+L +++KG + E A I ++ AV+ +H +G +HRD+KP+N+
Sbjct: 88 GGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENL 147
Query: 654 L---IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRC 710
L +D D I ++DFGL D G S + GTPG
Sbjct: 148 LYYSLDEDSKIMISDFGL-------------SKMEDPGSVLST------ACGTPG----- 183
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
Y+APEVL + Y++ D WS+GVI Y +L G
Sbjct: 184 -----------------------------YVAPEVLAQKPYSKAVDCWSIGVIAYILLCG 214
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQL 812
PPF A+ +++ E P +S D I L
Sbjct: 215 YPPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHL 256
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 92.8 bits (229), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 107/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 79
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 80 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 156
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P L GT +Y+ PE++ +
Sbjct: 157 -------WSVHAPSSR-----------------------RXXLCGTLDYLPPEMIEGRMH 186
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 222
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 77 YGYFHDATRV 86
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ + A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 35 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 94
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 92.8 bits (229), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 108/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 21 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 78
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 79 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 119
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ +FG
Sbjct: 120 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFG------------------------ 155
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P +L GT +Y+ PE++ +
Sbjct: 156 -------WSVHAPSSR-----------------------RTTLCGTLDYLPPEMIEGRMH 185
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 186 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 221
Score = 32.3 bits (72), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 16 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 76 YGYFHDATRV 85
Score = 30.8 bits (68), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 87 LYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 37 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 93
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 92.4 bits (228), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 108/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 23 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 80
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 81 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 121
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 122 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 157
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P +L GT +Y+ PE++ +
Sbjct: 158 -------WSVHAPSSR-----------------------RTTLCGTLDYLPPEMIEGRMH 187
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 188 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 223
Score = 32.0 bits (71), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 18 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 78 YGYFHDATRV 87
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ + A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 36 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 95
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 125/297 (42%), Gaps = 62/297 (20%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHNN--LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
E+++ R + H+ G +N ++ V++ L+ L ++ EP AR+Y+ ++
Sbjct: 67 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 126
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
+ +H+ IHRD+K N+ ++ D +K+ DFGL T + K
Sbjct: 127 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERK------------ 174
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
+L GTPNYIAPEVL + G+
Sbjct: 175 ----------------------------------------KTLCGTPNYIAPEVLSKKGH 194
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ 811
+ D WS+G I+Y +LVG PPF + ET ++ E IP ++P A LI +
Sbjct: 195 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE--YSIP--KHINPVAASLIQK 250
Query: 812 LCTGADKRLGKNASEVKAHPFFSN--VDFEKGVRTLT-PPHIPRIQNSMDTSNFDPV 865
+ D +E+ FF++ + + LT PP +S+D SN P+
Sbjct: 251 MLQ-TDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPXFSIAPSSLDPSNRKPL 306
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 107/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 76
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 77 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 153
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P L GT +Y+ PE++ +
Sbjct: 154 -------WSVHAPSSR-----------------------RXXLCGTLDYLPPEMIEGRMH 183
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 219
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 74 YGYFHDATRV 83
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ + A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 32 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 116/281 (41%), Gaps = 64/281 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--CVGAFG----EVTLVRKIDTNHLYVMKG--SPH 594
G F EV L T L +K I K G G E+ ++ KI ++ +
Sbjct: 29 GAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPNIVALDDIYESG 88
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
+LY +M + GG+L +++KG + E A I ++ AV+ +H +G +HRD+KP+N+L
Sbjct: 89 GHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLL 148
Query: 655 ---IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCI 711
+D D I ++DFGL D G S + GTPG
Sbjct: 149 YYSLDEDSKIMISDFGL-------------SKMEDPGSVLST------ACGTPG------ 183
Query: 712 NSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGS 771
Y+APEVL + Y++ D WS+GVI Y +L G
Sbjct: 184 ----------------------------YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGY 215
Query: 772 PPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQL 812
PPF A+ +++ E P +S D I L
Sbjct: 216 PPFYDENDAKLFEQILKAEYEFDSPYWDDISDSAKDFIRHL 256
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 107/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 19 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 76
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 77 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 118 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 153
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P L GT +Y+ PE++ +
Sbjct: 154 -------WSVHAPSSR-----------------------RTXLCGTLDYLPPEMIEGRMH 183
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 219
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 14 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 74 YGYFHDATRV 83
Score = 30.8 bits (68), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ + A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 32 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 91
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 113/270 (41%), Gaps = 65/270 (24%)
Query: 574 EVTLVRKIDTN-HLYVMKGSPHNNLYF--VMDYIPGGDLMSLLIKKGIFEEPLARFYIAE 630
EV ++RK+ + ++ +K + N +F V D + G+L L +K E R +
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 119
Query: 631 LTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQ 690
L + ++HK+ +HRD+KP+NIL+D D +IKLTDFG
Sbjct: 120 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS--------------------- 158
Query: 691 DSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT- 749
Q PG++ R + GTP+Y+APE++ +
Sbjct: 159 ---------CQLDPGEKLR-----------------------EVCGTPSYLAPEIIECSM 186
Query: 750 -----GYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPE 804
GY + D WS GVI+Y +L GSPPF +++ P S
Sbjct: 187 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDT 246
Query: 805 GADLILQ-LCTGADKRLGKNASEVKAHPFF 833
DL+ + L KR A E AHPFF
Sbjct: 247 VKDLVSRFLVVQPQKRY--TAEEALAHPFF 274
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/270 (27%), Positives = 112/270 (41%), Gaps = 65/270 (24%)
Query: 574 EVTLVRKIDTN-HLYVMKGSPHNNLYF--VMDYIPGGDLMSLLIKKGIFEEPLARFYIAE 630
EV ++RK+ + ++ +K + N +F V D + G+L L +K E R +
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRA 132
Query: 631 LTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQ 690
L + ++HK+ +HRD+KP+NIL+D D +IKLTDFG
Sbjct: 133 LLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFS--------------------- 171
Query: 691 DSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL--- 747
Q PG++ R + GTP+Y+APE++
Sbjct: 172 ---------CQLDPGEKLR-----------------------EVCGTPSYLAPEIIECSM 199
Query: 748 ---RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPE 804
GY + D WS GVI+Y +L GSPPF +++ P S
Sbjct: 200 NDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGSPEWDDYSDT 259
Query: 805 GADLILQ-LCTGADKRLGKNASEVKAHPFF 833
DL+ + L KR A E AHPFF
Sbjct: 260 VKDLVSRFLVVQPQKRY--TAEEALAHPFF 287
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 107/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 79
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 80 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 156
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P L GT +Y+ PE++ +
Sbjct: 157 -------WSVHAPSSR-----------------------RDDLCGTLDYLPPEMIEGRMH 186
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 222
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 77 YGYFHDATRV 86
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ + A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 35 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 94
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 87/171 (50%), Gaps = 24/171 (14%)
Query: 519 GEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG---EV 575
G ++ D N L V+ G FG+V L + T+ LY +K + K V E
Sbjct: 333 GNRDRMKLTDFNFLMVLGK-----GSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVEC 387
Query: 576 TLVRKIDTNHLYVMKGSP------------HNNLYFVMDYIPGGDLMSLLIKKGIFEEPL 623
T+V K + + G P + LYFVM+Y+ GGDLM + + G F+EP
Sbjct: 388 TMVEK----RVLALPGKPPFLTQLHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPH 443
Query: 624 ARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRW 674
A FY AE+ + + G I+RD+K DN+++D +GHIK+ DFG+C W
Sbjct: 444 AVFYAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIW 494
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 74/157 (47%), Gaps = 21/157 (13%)
Query: 734 LVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCL 793
GTP+YIAPE++ Y + DWW+ GV+LYEML G PF E ++
Sbjct: 502 FCGTPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME----H 557
Query: 794 HIPAEAQLSPEGADLILQLCTG-ADKRLG---KNASEVKAHPFFSNVDFEKGVRT-LTPP 848
++ +S E + L T KRLG + ++K H FF +D+EK R + PP
Sbjct: 558 NVAYPKSMSKEAVAICKGLMTKHPGKRLGCGPEGERDIKEHAFFRYIDWEKLERKEIQPP 617
Query: 849 HIPRIQNSMDTSNFD-----------PVDPDKLRNSD 874
+ P+ + + NFD P D + +RN D
Sbjct: 618 YKPKA-SGRNAENFDRFFTRHPPVLXPPDQEVIRNID 653
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILA-EADNEWVVKLYYSFQDKDNLYFVMDYI 142
T+ LYA+K L+K V++ + V E+ +LA ++ +L+ FQ D LYFVM+Y+
Sbjct: 365 TDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCFQTMDRLYFVMEYV 424
Query: 143 PGEKLI 148
G L+
Sbjct: 425 NGGDLM 430
Score = 34.3 bits (77), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 410 LQLETEMAKIGLSAEAQCQMRKMLSQKESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTL 469
L+ + E AKIG +A + K N R K+ F+ + +G G+FG+V L
Sbjct: 302 LRQKFERAKIGQGTKAPEEKTANTISKFDNNGNRDRMKLTDFNFLMV--LGKGSFGKVML 359
Query: 470 VRKIDTNHLYAMKTIYKCV 488
+ T+ LYA+K + K V
Sbjct: 360 SERKGTDELYAVKILKKDV 378
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 92.0 bits (227), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 109/277 (39%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ ++ + +K ++K GV E L R+++ I + G
Sbjct: 19 GKFGNVYLAREKNSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 76
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 77 FHDSTRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 117
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 118 ANALSYCHSKKVIHRDIKPENLLLGSAGELKIADFG------------------------ 153
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P +L GT +Y+ PE++ +
Sbjct: 154 -------WSVHAPSSR-----------------------RAALCGTLDYLPPEMIEGRMH 183
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT +T YK I+
Sbjct: 184 DEKVDLWSLGVLCYEFLVGKPPFEANTYQDT-YKRIS 219
Score = 31.2 bits (69), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 32/61 (52%)
Query: 83 DTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYI 142
++ + A+K L KA + K ++ E +I + + +++LY F D +Y +++Y
Sbjct: 31 NSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDSTRVYLILEYA 90
Query: 143 P 143
P
Sbjct: 91 P 91
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 108/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + + +K ++K GV E L R+++ I + G
Sbjct: 22 GKFGNVYLAREKQSKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 79
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 80 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 120
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ +FG
Sbjct: 121 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIANFG------------------------ 156
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P +L GT +Y+ PE++ +
Sbjct: 157 -------WSVHAPSSR-----------------------RTTLCGTLDYLPPEMIEGRMH 186
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 187 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 222
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 457 KPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV--GAFGEVTLVRKIDTNHLYVMKTIYKC 514
+P+G G FG V L R+ + + A+K ++K A E L R+++ I +
Sbjct: 17 RPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 515 VGAFGEVTLV 524
G F + T V
Sbjct: 77 YGYFHDATRV 86
Score = 30.8 bits (68), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 15/60 (25%), Positives = 31/60 (51%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ + A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 35 SKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 94
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 16/164 (9%)
Query: 520 EVTLVR---KIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCV------- 569
EV+L + ++ N +K + K G FG+V LV++ T Y MK + K V
Sbjct: 135 EVSLAKPKHRVTMNEFEYLKLLGK--GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEV 192
Query: 570 -GAFGEVTLVRKIDTNHLYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARF 626
E +++ L +K S H+ L FVM+Y GG+L L ++ +F E ARF
Sbjct: 193 AHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF 252
Query: 627 YIAELTCAVESVH-KMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
Y AE+ A++ +H + ++RD+K +N+++D+DGHIK+TDFGLC
Sbjct: 253 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC 296
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 9/136 (6%)
Query: 733 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESC 792
+ GTP Y+APEVL Y + DWW +GV++YEM+ G PF N E +++I E
Sbjct: 308 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY-NQDHEKLFELILMEE- 365
Query: 793 LHIPAEAQLSPEGADLILQLCTGADK-RLG---KNASEVKAHPFFSNVDFEKGV-RTLTP 847
+ P L PE L+ L K RLG ++A E+ H FF+ + ++ + L+P
Sbjct: 366 IRFP--RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSP 423
Query: 848 PHIPRIQNSMDTSNFD 863
P P++ + DT FD
Sbjct: 424 PFKPQVTSETDTRYFD 439
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
T YAMK L+K ++ +++VAH E +L + + ++ L YSFQ D L FVM+Y
Sbjct: 172 TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN 231
Query: 144 GEKLI 148
G +L
Sbjct: 232 GGELF 236
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 445 RAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV 488
R M++ ++K+ +G G FG+V LV++ T YAMK + K V
Sbjct: 144 RVTMNEFEYLKL--LGKGTFGKVILVKEKATGRYYAMKILKKEV 185
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L+K ++ +++VAH E +L + + ++ L YSFQ
Sbjct: 178 MKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 218
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/164 (35%), Positives = 92/164 (56%), Gaps = 16/164 (9%)
Query: 520 EVTLVR---KIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCV------- 569
EV+L + ++ N +K + K G FG+V LV++ T Y MK + K V
Sbjct: 138 EVSLAKPKHRVTMNEFEYLKLLGK--GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEV 195
Query: 570 -GAFGEVTLVRKIDTNHLYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARF 626
E +++ L +K S H+ L FVM+Y GG+L L ++ +F E ARF
Sbjct: 196 AHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARF 255
Query: 627 YIAELTCAVESVH-KMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
Y AE+ A++ +H + ++RD+K +N+++D+DGHIK+TDFGLC
Sbjct: 256 YGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC 299
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/136 (35%), Positives = 72/136 (52%), Gaps = 9/136 (6%)
Query: 733 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESC 792
+ GTP Y+APEVL Y + DWW +GV++YEM+ G PF N E +++I E
Sbjct: 311 TFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY-NQDHEKLFELILMEE- 368
Query: 793 LHIPAEAQLSPEGADLILQLCTGADK-RLG---KNASEVKAHPFFSNVDFEKGV-RTLTP 847
+ P L PE L+ L K RLG ++A E+ H FF+ + ++ + L+P
Sbjct: 369 IRFP--RTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSP 426
Query: 848 PHIPRIQNSMDTSNFD 863
P P++ + DT FD
Sbjct: 427 PFKPQVTSETDTRYFD 442
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
T YAMK L+K ++ +++VAH E +L + + ++ L YSFQ D L FVM+Y
Sbjct: 175 TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN 234
Query: 144 GEKLI 148
G +L
Sbjct: 235 GGELF 239
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 445 RAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV 488
R M++ ++K+ +G G FG+V LV++ T YAMK + K V
Sbjct: 147 RVTMNEFEYLKL--LGKGTFGKVILVKEKATGRYYAMKILKKEV 188
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L+K ++ +++VAH E +L + + ++ L YSFQ
Sbjct: 181 MKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 221
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 91.7 bits (226), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 107/277 (38%), Gaps = 80/277 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKC----VGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
G FG V L R+ + +K ++K GV E L R+++ I + G
Sbjct: 16 GKFGNVYLAREKQRKFILALKVLFKAQLEKAGV--EHQLRREVEIQSHLRHPNILRLYGY 73
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
F + T V Y +++Y P G + L K F+E YI EL
Sbjct: 74 FHDATRV-------------------YLILEYAPLGTVYRELQKLSKFDEQRTATYITEL 114
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A+ H IHRDIKP+N+L+ G +K+ DFG
Sbjct: 115 ANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFG------------------------ 150
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
WS P +L GT +Y+ PE++ +
Sbjct: 151 -------WSVHAPSSR-----------------------RTTLCGTLDYLPPEMIEGRMH 180
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
+ D WS+GV+ YE LVG PPF ANT ET YK I+
Sbjct: 181 DEKVDLWSLGVLCYEFLVGKPPFEANTYQET-YKRIS 216
Score = 30.8 bits (68), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 15/57 (26%), Positives = 30/57 (52%)
Query: 87 LYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
+ A+K L KA + K ++ E +I + + +++LY F D +Y +++Y P
Sbjct: 32 ILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYFHDATRVYLILEYAP 88
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 130/307 (42%), Gaps = 71/307 (23%)
Query: 526 KIDTNHLYVMK-TIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKC----VGAFG-EVTLVR 579
K D N Y ++ TI + G +GEV + + T K I K V F E+ +++
Sbjct: 4 KGDINQYYTLENTIGR--GSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMK 61
Query: 580 KIDTNHLYVMKGSPHNN--LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVES 637
+D ++ + + +N +Y VM+ GG+L ++ K +F E A + ++ AV
Sbjct: 62 SLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 121
Query: 638 VHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSME 694
HK+ HRD+KP+N L D +KL DFGL F+
Sbjct: 122 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK--------------------- 160
Query: 695 PSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQL 754
PG+ R + VGTP Y++P+V L Y
Sbjct: 161 ---------PGKMMR-----------------------TKVGTPYYVSPQV-LEGLYGPE 187
Query: 755 CDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQL--SPEGADLILQL 812
CD WS GV++Y +L G PPF A T E K+ E P + L SP+ LI +L
Sbjct: 188 CDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIR--EGTFTFPEKDWLNVSPQAESLIRRL 245
Query: 813 CTGADKR 819
T + K+
Sbjct: 246 LTKSPKQ 252
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 104 VAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGEKLI 148
V K E +I+ D+ +++LY +F+D ++Y VM+ G +L
Sbjct: 50 VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELF 94
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/307 (28%), Positives = 130/307 (42%), Gaps = 71/307 (23%)
Query: 526 KIDTNHLYVMK-TIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKC----VGAFG-EVTLVR 579
K D N Y ++ TI + G +GEV + + T K I K V F E+ +++
Sbjct: 21 KGDINQYYTLENTIGR--GSWGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMK 78
Query: 580 KIDTNHLYVMKGSPHNN--LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVES 637
+D ++ + + +N +Y VM+ GG+L ++ K +F E A + ++ AV
Sbjct: 79 SLDHPNIIRLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAY 138
Query: 638 VHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSME 694
HK+ HRD+KP+N L D +KL DFGL F+
Sbjct: 139 CHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFK--------------------- 177
Query: 695 PSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQL 754
PG+ R + VGTP Y++P+V L Y
Sbjct: 178 ---------PGKMMR-----------------------TKVGTPYYVSPQV-LEGLYGPE 204
Query: 755 CDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQL--SPEGADLILQL 812
CD WS GV++Y +L G PPF A T E K+ E P + L SP+ LI +L
Sbjct: 205 CDEWSAGVMMYVLLCGYPPFSAPTDXEVMLKIR--EGTFTFPEKDWLNVSPQAESLIRRL 262
Query: 813 CTGADKR 819
T + K+
Sbjct: 263 LTKSPKQ 269
Score = 32.3 bits (72), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 26/45 (57%)
Query: 104 VAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGEKLI 148
V K E +I+ D+ +++LY +F+D ++Y VM+ G +L
Sbjct: 67 VDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELF 111
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 104/253 (41%), Gaps = 58/253 (22%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
+ L+ VM+Y+ GG L ++ + + E +A E A+E +H IHRDIK DNIL
Sbjct: 90 DELWVVMEYLAGGSLTDVVTETCMDEGQIAAV-CRECLQALEFLHSNQVIHRDIKSDNIL 148
Query: 655 IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSP 714
+ DG +KLTDFG C +Q TP Q R
Sbjct: 149 LGMDGSVKLTDFGFC------------------------------AQITPEQSKR----- 173
Query: 715 LKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
++VGTP ++APEV+ R Y D WS+G++ EM+ G PP+
Sbjct: 174 -----------------STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
Query: 775 LANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPFFS 834
L Y +I + +LS D L C D +A E+ H F
Sbjct: 217 LNENPLRALY-LIATNGTPELQNPEKLSAIFRDF-LNRCLDMDVEKRGSAKELLQHQFLK 274
Query: 835 NVDFEKGVRTLTP 847
K + +LTP
Sbjct: 275 ---IAKPLSSLTP 284
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 90.9 bits (224), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 74/135 (54%), Gaps = 7/135 (5%)
Query: 731 AHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWE 790
+ GTP+YIAPE+LL Y DWWS GV+LYEML+G PF E + I +
Sbjct: 176 TNEFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL-FHSIRMD 234
Query: 791 SCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASEVKAHPFFSNVDFEKGVRT-LTPP 848
+ + L E DL+++L +KRLG +++ HP F +++E+ R + PP
Sbjct: 235 NPFY---PRWLEKEAKDLLVKLFVREPEKRLGVRG-DIRQHPLFREINWEELERKEIDPP 290
Query: 849 HIPRIQNSMDTSNFD 863
P++++ D SNFD
Sbjct: 291 FRPKVKSPFDCSNFD 305
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 75/138 (54%), Gaps = 11/138 (7%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG---EVTLVRK----IDTNHLYVMK----G 591
G FG+V L TN + +K + K V E T+V K + H ++
Sbjct: 29 GSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF 88
Query: 592 SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
NL+FVM+Y+ GGDLM + F+ A FY AE+ ++ +H G ++RD+K D
Sbjct: 89 QTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLD 148
Query: 652 NILIDRDGHIKLTDFGLC 669
NIL+D+DGHIK+ DFG+C
Sbjct: 149 NILLDKDGHIKIADFGMC 166
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 42/66 (63%), Gaps = 1/66 (1%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEA-DNEWVVKLYYSFQDKDNLYFVMDYI 142
TN +A+K L+K VL + V E+ +L+ A ++ ++ ++ +FQ K+NL+FVM+Y+
Sbjct: 42 TNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKENLFFVMEYL 101
Query: 143 PGEKLI 148
G L+
Sbjct: 102 NGGDLM 107
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 103/253 (40%), Gaps = 58/253 (22%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
+ L+ VM+Y+ GG L ++ + + E +A E A+E +H IHRDIK DNIL
Sbjct: 90 DELWVVMEYLAGGSLTDVVTETCMDEGQIAAV-CRECLQALEFLHSNQVIHRDIKSDNIL 148
Query: 655 IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSP 714
+ DG +KLTDFG C +Q TP Q R
Sbjct: 149 LGMDGSVKLTDFGFC------------------------------AQITPEQSKR----- 173
Query: 715 LKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
+VGTP ++APEV+ R Y D WS+G++ EM+ G PP+
Sbjct: 174 -----------------SEMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
Query: 775 LANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPFFS 834
L Y +I + +LS D L C D +A E+ H F
Sbjct: 217 LNENPLRALY-LIATNGTPELQNPEKLSAIFRDF-LNRCLDMDVEKRGSAKELLQHQFLK 274
Query: 835 NVDFEKGVRTLTP 847
K + +LTP
Sbjct: 275 ---IAKPLSSLTP 284
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 90.5 bits (223), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 49/135 (36%), Positives = 74/135 (54%), Gaps = 7/135 (5%)
Query: 731 AHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWE 790
+ GTP+YIAPE+LL Y DWWS GV+LYEML+G PF E + I +
Sbjct: 175 TNXFCGTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEEL-FHSIRMD 233
Query: 791 SCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASEVKAHPFFSNVDFEKGVRT-LTPP 848
+ + L E DL+++L +KRLG +++ HP F +++E+ R + PP
Sbjct: 234 NPFY---PRWLEKEAKDLLVKLFVREPEKRLGVRG-DIRQHPLFREINWEELERKEIDPP 289
Query: 849 HIPRIQNSMDTSNFD 863
P++++ D SNFD
Sbjct: 290 FRPKVKSPFDCSNFD 304
Score = 87.0 bits (214), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 75/138 (54%), Gaps = 11/138 (7%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG---EVTLVRK----IDTNHLYVMK----G 591
G FG+V L TN + +K + K V E T+V K + H ++
Sbjct: 28 GSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF 87
Query: 592 SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
NL+FVM+Y+ GGDLM + F+ A FY AE+ ++ +H G ++RD+K D
Sbjct: 88 QTKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLD 147
Query: 652 NILIDRDGHIKLTDFGLC 669
NIL+D+DGHIK+ DFG+C
Sbjct: 148 NILLDKDGHIKIADFGMC 165
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 63 VLKSILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEA-DNEW 121
+L +LG+ + TN +A+K L+K VL + V E+ +L+ A ++ +
Sbjct: 20 ILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPF 79
Query: 122 VVKLYYSFQDKDNLYFVMDYIPGEKLI 148
+ ++ +FQ K+NL+FVM+Y+ G L+
Sbjct: 80 LTHMFCTFQTKENLFFVMEYLNGGDLM 106
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 103/253 (40%), Gaps = 58/253 (22%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
+ L+ VM+Y+ GG L ++ + + E +A E A+E +H IHRDIK DNIL
Sbjct: 91 DELWVVMEYLAGGSLTDVVTETCMDEGQIAAV-CRECLQALEFLHSNQVIHRDIKSDNIL 149
Query: 655 IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSP 714
+ DG +KLTDFG C +Q TP Q R
Sbjct: 150 LGMDGSVKLTDFGFC------------------------------AQITPEQSKR----- 174
Query: 715 LKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
+VGTP ++APEV+ R Y D WS+G++ EM+ G PP+
Sbjct: 175 -----------------SXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
Query: 775 LANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPFFS 834
L Y +I + +LS D L C D +A E+ H F
Sbjct: 218 LNENPLRALY-LIATNGTPELQNPEKLSAIFRDF-LNRCLEMDVEKRGSAKELIQHQFLK 275
Query: 835 NVDFEKGVRTLTP 847
K + +LTP
Sbjct: 276 ---IAKPLSSLTP 285
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 90.1 bits (222), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 103/253 (40%), Gaps = 58/253 (22%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
+ L+ VM+Y+ GG L ++ + + E +A E A+E +H IHRDIK DNIL
Sbjct: 90 DELWVVMEYLAGGSLTDVVTETCMDEGQIAAV-CRECLQALEFLHSNQVIHRDIKSDNIL 148
Query: 655 IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSP 714
+ DG +KLTDFG C +Q TP Q R
Sbjct: 149 LGMDGSVKLTDFGFC------------------------------AQITPEQSKR----- 173
Query: 715 LKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
+VGTP ++APEV+ R Y D WS+G++ EM+ G PP+
Sbjct: 174 -----------------SXMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 216
Query: 775 LANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPFFS 834
L Y +I + +LS D L C D +A E+ H F
Sbjct: 217 LNENPLRALY-LIATNGTPELQNPEKLSAIFRDF-LNRCLEMDVEKRGSAKELLQHQFLK 274
Query: 835 NVDFEKGVRTLTP 847
K + +LTP
Sbjct: 275 ---IAKPLSSLTP 284
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 90/309 (29%), Positives = 122/309 (39%), Gaps = 79/309 (25%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNN------ 596
G FG L+R T L +K I + GA + + R+I NH + H N
Sbjct: 31 GNFGVARLMRDKLTKELVAVKYIER--GAAIDENVQREI-INH----RSLRHPNIVRFKE 83
Query: 597 -------LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIK 649
L +M+Y GG+L + G F E ARF+ +L V H M HRD+K
Sbjct: 84 VILTPTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLK 143
Query: 650 PDNILIDRD--GHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
+N L+D +K+ DFG Y +S+ H +
Sbjct: 144 LENTLLDGSPAPRLKICDFG------------YSKSSVLHSQ------------------ 173
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYT-QLCDWWSVGVILYE 766
S VGTP YIAPEVLLR Y ++ D WS GV LY
Sbjct: 174 -----------------------PKSTVGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYV 210
Query: 767 MLVGSPPFLANTSAETQYKVIN--WESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNA 824
MLVG+ PF K I IP + ++SPE LI ++ AD +
Sbjct: 211 MLVGAYPFEDPEEPRDYRKTIQRILSVKYSIPDDIRISPECCHLISRIFV-ADPATRISI 269
Query: 825 SEVKAHPFF 833
E+K H +F
Sbjct: 270 PEIKTHSWF 278
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 89.7 bits (221), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 59/165 (35%), Positives = 90/165 (54%), Gaps = 19/165 (11%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCV------ 569
GA VT+ N +K + K G FG+V LV++ T Y MK + K V
Sbjct: 1 GAMARVTM------NEFEYLKLLGK--GTFGKVILVKEKATGRYYAMKILKKEVIVAKDE 52
Query: 570 --GAFGEVTLVRKIDTNHLYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLAR 625
E +++ L +K S H+ L FVM+Y GG+L L ++ +F E AR
Sbjct: 53 VAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRAR 112
Query: 626 FYIAELTCAVESVH-KMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
FY AE+ A++ +H + ++RD+K +N+++D+DGHIK+TDFGLC
Sbjct: 113 FYGAEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC 157
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 9/135 (6%)
Query: 734 LVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCL 793
GTP Y+APEVL Y + DWW +GV++YEM+ G PF N E +++I E
Sbjct: 170 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY-NQDHEKLFELILMEE-- 226
Query: 794 HIPAEAQLSPEGADLILQLCTGADK-RLG---KNASEVKAHPFFSNVDFEKGV-RTLTPP 848
I L PE L+ L K RLG ++A E+ H FF+ + ++ + L+PP
Sbjct: 227 -IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPP 285
Query: 849 HIPRIQNSMDTSNFD 863
P++ + DT FD
Sbjct: 286 FKPQVTSETDTRYFD 300
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
T YAMK L+K ++ +++VAH E +L + + ++ L YSFQ D L FVM+Y
Sbjct: 33 TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN 92
Query: 144 GEKLI 148
G +L
Sbjct: 93 GGELF 97
Score = 32.0 bits (71), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 446 AKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV 488
A++ + F +K +G G FG+V LV++ T YAMK + K V
Sbjct: 4 ARVTMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEV 46
Score = 31.6 bits (70), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L+K ++ +++VAH E +L + + ++ L YSFQ
Sbjct: 39 MKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 79
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 89.7 bits (221), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 88/158 (55%), Gaps = 13/158 (8%)
Query: 523 LVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCV--------GAFGE 574
L ++ N +K + K G FG+V LV++ T Y MK + K V E
Sbjct: 1 LGSRVTMNEFEYLKLLGK--GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTE 58
Query: 575 VTLVRKIDTNHLYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELT 632
+++ L +K S H+ L FVM+Y GG+L L ++ +F E ARFY AE+
Sbjct: 59 NRVLQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIV 118
Query: 633 CAVESVH-KMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
A++ +H + ++RD+K +N+++D+DGHIK+TDFGLC
Sbjct: 119 SALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC 156
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 9/135 (6%)
Query: 734 LVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCL 793
GTP Y+APEVL Y + DWW +GV++YEM+ G PF N E +++I E
Sbjct: 169 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY-NQDHEKLFELILMEE-- 225
Query: 794 HIPAEAQLSPEGADLILQLCTGADK-RLG---KNASEVKAHPFFSNVDFEKGV-RTLTPP 848
I L PE L+ L K RLG ++A E+ H FF+ + ++ + L+PP
Sbjct: 226 -IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPP 284
Query: 849 HIPRIQNSMDTSNFD 863
P++ + DT FD
Sbjct: 285 FKPQVTSETDTRYFD 299
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
T YAMK L+K ++ +++VAH E +L + + ++ L YSFQ D L FVM+Y
Sbjct: 32 TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN 91
Query: 144 GEKLI 148
G +L
Sbjct: 92 GGELF 96
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 445 RAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV 488
R M++ ++K+ +G G FG+V LV++ T YAMK + K V
Sbjct: 4 RVTMNEFEYLKL--LGKGTFGKVILVKEKATGRYYAMKILKKEV 45
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L+K ++ +++VAH E +L + + ++ L YSFQ
Sbjct: 38 MKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 78
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 89.4 bits (220), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 125/303 (41%), Gaps = 67/303 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCV--------GAFGEVTLVRKIDTNHLYVMKGSPH 594
G F + + +DT ++ K + K + E+ + + +D H+ G
Sbjct: 53 GGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFE 112
Query: 595 NN--LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
++ +Y V++ L+ L ++ EP AR+++ + V+ +H IHRD+K N
Sbjct: 113 DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGN 172
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
+ ++ D +K+ DFGL T + K
Sbjct: 173 LFLNDDMDVKIGDFGLATKIEFDGERK--------------------------------- 199
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
+L GTPNYIAPEVL + G++ D WS+G ILY +LVG P
Sbjct: 200 -------------------KTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP 240
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPF 832
PF + ET ++ E + ++P + LI ++ AD L + +E+ F
Sbjct: 241 PFETSCLKETYIRIKKNEYSV----PRHINPVASALIRRMLH-ADPTLRPSVAELLTDEF 295
Query: 833 FSN 835
F++
Sbjct: 296 FTS 298
Score = 36.6 bits (83), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
LG+ EI +DT ++A K + K+ +LK +Q + E I DN VV +
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 127 YSFQDKDNLYFVMD 140
F+D D +Y V++
Sbjct: 109 GFFEDDDFVYVVLE 122
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 87/155 (56%), Gaps = 13/155 (8%)
Query: 526 KIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCV--------GAFGEVTL 577
++ N +K + K G FG+V LV++ T Y MK + K V E +
Sbjct: 6 RVTMNEFEYLKLLGK--GTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRV 63
Query: 578 VRKIDTNHLYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAV 635
++ L +K S H+ L FVM+Y GG+L L ++ +F E ARFY AE+ A+
Sbjct: 64 LQNSRHPFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSAL 123
Query: 636 ESVH-KMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
+ +H + ++RD+K +N+++D+DGHIK+TDFGLC
Sbjct: 124 DYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLC 158
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 70/135 (51%), Gaps = 9/135 (6%)
Query: 734 LVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCL 793
GTP Y+APEVL Y + DWW +GV++YEM+ G PF N E +++I E
Sbjct: 171 FCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPFY-NQDHEKLFELILMEE-- 227
Query: 794 HIPAEAQLSPEGADLILQLCTGADK-RLG---KNASEVKAHPFFSNVDFEKGV-RTLTPP 848
I L PE L+ L K RLG ++A E+ H FF+ + ++ + L+PP
Sbjct: 228 -IRFPRTLGPEAKSLLSGLLKKDPKQRLGGGSEDAKEIMQHRFFAGIVWQHVYEKKLSPP 286
Query: 849 HIPRIQNSMDTSNFD 863
P++ + DT FD
Sbjct: 287 FKPQVTSETDTRYFD 301
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
T YAMK L+K ++ +++VAH E +L + + ++ L YSFQ D L FVM+Y
Sbjct: 34 TGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQTHDRLCFVMEYAN 93
Query: 144 GEKLI 148
G +L
Sbjct: 94 GGELF 98
Score = 31.6 bits (70), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%), Gaps = 2/44 (4%)
Query: 445 RAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCV 488
R M++ ++K+ +G G FG+V LV++ T YAMK + K V
Sbjct: 6 RVTMNEFEYLKL--LGKGTFGKVILVKEKATGRYYAMKILKKEV 47
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 25/41 (60%)
Query: 1 MKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQ 41
MK L+K ++ +++VAH E +L + + ++ L YSFQ
Sbjct: 40 MKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSFQ 80
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 89.4 bits (220), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 104/253 (41%), Gaps = 58/253 (22%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
+ L+ VM+Y+ GG L ++ + + E +A E A+E +H IHR+IK DNIL
Sbjct: 91 DELWVVMEYLAGGSLTDVVTETCMDEGQIAAV-CRECLQALEFLHSNQVIHRNIKSDNIL 149
Query: 655 IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSP 714
+ DG +KLTDFG C +Q TP Q R
Sbjct: 150 LGMDGSVKLTDFGFC------------------------------AQITPEQSKR----- 174
Query: 715 LKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
++VGTP ++APEV+ R Y D WS+G++ EM+ G PP+
Sbjct: 175 -----------------STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY 217
Query: 775 LANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPFFS 834
L Y +I + +LS D L C D +A E+ H F
Sbjct: 218 LNENPLRALY-LIATNGTPELQNPEKLSAIFRDF-LNRCLEMDVEKRGSAKELIQHQFLK 275
Query: 835 NVDFEKGVRTLTP 847
K + +LTP
Sbjct: 276 ---IAKPLSSLTP 285
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 124/303 (40%), Gaps = 67/303 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCV--------GAFGEVTLVRKIDTNHLYVMKGSPH 594
G F + + +DT ++ K + K + E+ + + +D H+ G
Sbjct: 53 GGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFE 112
Query: 595 NN--LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
++ +Y V++ L+ L ++ EP AR+++ + V+ +H IHRD+K N
Sbjct: 113 DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGN 172
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
+ ++ D +K+ DFGL T + K
Sbjct: 173 LFLNDDMDVKIGDFGLATKIEFDGERK--------------------------------- 199
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
L GTPNYIAPEVL + G++ D WS+G ILY +LVG P
Sbjct: 200 -------------------KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP 240
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPF 832
PF + ET ++ E + ++P + LI ++ AD L + +E+ F
Sbjct: 241 PFETSCLKETYIRIKKNEYSV----PRHINPVASALIRRMLH-ADPTLRPSVAELLTDEF 295
Query: 833 FSN 835
F++
Sbjct: 296 FTS 298
Score = 36.2 bits (82), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
LG+ EI +DT ++A K + K+ +LK +Q + E I DN VV +
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 127 YSFQDKDNLYFVMD 140
F+D D +Y V++
Sbjct: 109 GFFEDDDFVYVVLE 122
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 88.6 bits (218), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 124/303 (40%), Gaps = 67/303 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCV--------GAFGEVTLVRKIDTNHLYVMKGSPH 594
G F + + +DT ++ K + K + E+ + + +D H+ G
Sbjct: 53 GGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFE 112
Query: 595 NN--LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
++ +Y V++ L+ L ++ EP AR+++ + V+ +H IHRD+K N
Sbjct: 113 DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGN 172
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
+ ++ D +K+ DFGL T + K
Sbjct: 173 LFLNDDMDVKIGDFGLATKIEFDGERK--------------------------------- 199
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
L GTPNYIAPEVL + G++ D WS+G ILY +LVG P
Sbjct: 200 -------------------KXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP 240
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPF 832
PF + ET ++ E + ++P + LI ++ AD L + +E+ F
Sbjct: 241 PFETSCLKETYIRIKKNEYSV----PRHINPVASALIRRMLH-ADPTLRPSVAELLTDEF 295
Query: 833 FSN 835
F++
Sbjct: 296 FTS 298
Score = 36.6 bits (83), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
LG+ EI +DT ++A K + K+ +LK +Q + E I DN VV +
Sbjct: 49 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 108
Query: 127 YSFQDKDNLYFVMD 140
F+D D +Y V++
Sbjct: 109 GFFEDDDFVYVVLE 122
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 88.6 bits (218), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/246 (28%), Positives = 107/246 (43%), Gaps = 68/246 (27%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
N +Y V++ G+ M+ +K + F E AR ++ ++ + +H G +HRD+ N
Sbjct: 84 NYVYLVLEMCHNGE-MNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSN 142
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
+L+ R+ +IK+ DFGL T + H Y
Sbjct: 143 LLLTRNMNIKIADFGLATQLKMPHEKHY-------------------------------- 170
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
+L GTPNYI+PE+ R+ + D WS+G + Y +L+G P
Sbjct: 171 --------------------TLCGTPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRP 210
Query: 773 PFLANTSAETQYKVI--NWESCLHIPAEAQLSPEGADLILQLC--TGADKRLGKNASEVK 828
PF +T T KV+ ++E +P + LS E DLI QL AD+ + S V
Sbjct: 211 PFDTDTVKNTLNKVVLADYE----MP--SFLSIEAKDLIHQLLRRNPADRL---SLSSVL 261
Query: 829 AHPFFS 834
HPF S
Sbjct: 262 DHPFMS 267
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 124/303 (40%), Gaps = 67/303 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCV--------GAFGEVTLVRKIDTNHLYVMKGSPH 594
G F + + +DT ++ K + K + E+ + + +D H+ G
Sbjct: 37 GGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHGFFE 96
Query: 595 NN--LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
++ +Y V++ L+ L ++ EP AR+++ + V+ +H IHRD+K N
Sbjct: 97 DDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGN 156
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
+ ++ D +K+ DFGL T + K
Sbjct: 157 LFLNDDMDVKIGDFGLATKIEFDGERK--------------------------------- 183
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
L GTPNYIAPEVL + G++ D WS+G ILY +LVG P
Sbjct: 184 -------------------KDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTLLVGKP 224
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPF 832
PF + ET ++ E + ++P + LI ++ AD L + +E+ F
Sbjct: 225 PFETSCLKETYIRIKKNEYSV----PRHINPVASALIRRMLH-ADPTLRPSVAELLTDEF 279
Query: 833 FSN 835
F++
Sbjct: 280 FTS 282
Score = 36.2 bits (82), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 37/74 (50%)
Query: 67 ILGESTTEVDNEIRLIDTNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLY 126
LG+ EI +DT ++A K + K+ +LK +Q + E I DN VV +
Sbjct: 33 FLGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 92
Query: 127 YSFQDKDNLYFVMD 140
F+D D +Y V++
Sbjct: 93 GFFEDDDFVYVVLE 106
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 87.8 bits (216), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/274 (25%), Positives = 115/274 (41%), Gaps = 66/274 (24%)
Query: 525 RKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKC-VGAFG-EVTLVRKID 582
RK + +++ + K G FG V L R+ + +K ++K + G E L R+I+
Sbjct: 9 RKFTIDDFDIVRPLGK--GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIE 66
Query: 583 TN------HLYVMKGSPHNN--LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCA 634
++ M H+ +Y ++++ P G+L L K G F+E + ++ EL A
Sbjct: 67 IQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADA 126
Query: 635 VESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSME 694
+ H+ IHRDIKP+N+L+ G +K+ DFG
Sbjct: 127 LHYCHERKVIHRDIKPENLLMGYKGELKIADFG--------------------------- 159
Query: 695 PSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQL 754
WS P R + GT +Y+ PE++ + +
Sbjct: 160 ----WSVHAPSLRRR-----------------------XMCGTLDYLPPEMIEGKTHDEK 192
Query: 755 CDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN 788
D W GV+ YE LVG PPF + + ET +++N
Sbjct: 193 VDLWCAGVLCYEFLVGMPPFDSPSHTETHRRIVN 226
Score = 30.4 bits (67), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYK 486
F ++P+G G FG V L R+ + A+K ++K
Sbjct: 16 FDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFK 49
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 107/256 (41%), Gaps = 64/256 (25%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKC-VGAFG-EVTLVRKIDTN------HLYVMKGSPH 594
G FG V L R+ + +K ++K + G E L R+I+ ++ M H
Sbjct: 25 GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH 84
Query: 595 NN--LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
+ +Y ++++ P G+L L K G F+E + ++ EL A+ H+ IHRDIKP+N
Sbjct: 85 DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPEN 144
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
+L+ G +K+ DFG WS P R
Sbjct: 145 LLMGYKGELKIADFG-------------------------------WSVHAPSLRRR--- 170
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
+ GT +Y+ PE++ + + D W GV+ YE LVG P
Sbjct: 171 --------------------XMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMP 210
Query: 773 PFLANTSAETQYKVIN 788
PF + + ET +++N
Sbjct: 211 PFDSPSHTETHRRIVN 226
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 149/363 (41%), Gaps = 88/363 (24%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCV--------GAFGEVTLVRKIDTNHLYVMKGS-- 592
G FGEV + T LY K + K GA E ++ K+ + + + +
Sbjct: 196 GGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFE 255
Query: 593 PHNNLYFVMDYIPGGDLMSLLIK----KGIFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
+L VM + GGD+ + F+EP A FY A++ +E +H+ I+RD+
Sbjct: 256 TKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDL 315
Query: 649 KPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQEC 708
KP+N+L+D DG+++++D GL ++ + ++G G
Sbjct: 316 KPENVLLDDDGNVRISDLGLAV---------------------ELKAGQTKTKGYAG--- 351
Query: 709 RCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
TP ++APE+LL Y D++++GV LYEM+
Sbjct: 352 ----------------------------TPGFMAPELLLGEEYDFSVDYFALGVTLYEMI 383
Query: 769 VGSPPFLANT----SAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLG-- 821
PF A + E + +V+ E + P + SP D L +KRLG
Sbjct: 384 AARGPFRARGEKVENKELKQRVL--EQAVTYP--DKFSPASKDFCEALLQKDPEKRLGFR 439
Query: 822 -KNASEVKAHPFFSNVDF---EKGVRTLTPPHIPR-----IQNSMDTSNFDPVDPDKLRN 872
+ ++ HP F ++ + E G+ LTPP +P +N D F V
Sbjct: 440 DGSCDGLRTHPLFRDISWRQLEAGM--LTPPFVPDSRTVYAKNIQDVGAFSTVKGVAFEK 497
Query: 873 SDS 875
+D+
Sbjct: 498 ADT 500
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 149/363 (41%), Gaps = 88/363 (24%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCV--------GAFGEVTLVRKIDTNHLYVMKGS-- 592
G FGEV + T LY K + K GA E ++ K+ + + + +
Sbjct: 196 GGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFE 255
Query: 593 PHNNLYFVMDYIPGGDLMSLLIK----KGIFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
+L VM + GGD+ + F+EP A FY A++ +E +H+ I+RD+
Sbjct: 256 TKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDL 315
Query: 649 KPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQEC 708
KP+N+L+D DG+++++D GL ++ + ++G G
Sbjct: 316 KPENVLLDDDGNVRISDLGLAV---------------------ELKAGQTKTKGYAG--- 351
Query: 709 RCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
TP ++APE+LL Y D++++GV LYEM+
Sbjct: 352 ----------------------------TPGFMAPELLLGEEYDFSVDYFALGVTLYEMI 383
Query: 769 VGSPPFLANT----SAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLG-- 821
PF A + E + +V+ E + P + SP D L +KRLG
Sbjct: 384 AARGPFRARGEKVENKELKQRVL--EQAVTYP--DKFSPASKDFCEALLQKDPEKRLGFR 439
Query: 822 -KNASEVKAHPFFSNVDF---EKGVRTLTPPHIPR-----IQNSMDTSNFDPVDPDKLRN 872
+ ++ HP F ++ + E G+ LTPP +P +N D F V
Sbjct: 440 DGSCDGLRTHPLFRDISWRQLEAGM--LTPPFVPDSRTVYAKNIQDVGAFSTVKGVAFEK 497
Query: 873 SDS 875
+D+
Sbjct: 498 ADT 500
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 66/256 (25%), Positives = 107/256 (41%), Gaps = 64/256 (25%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKC-VGAFG-EVTLVRKIDTN------HLYVMKGSPH 594
G FG V L R+ + +K ++K + G E L R+I+ ++ M H
Sbjct: 26 GKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRHPNILRMYNYFH 85
Query: 595 NN--LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
+ +Y ++++ P G+L L K G F+E + ++ EL A+ H+ IHRDIKP+N
Sbjct: 86 DRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPEN 145
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
+L+ G +K+ DFG WS P R
Sbjct: 146 LLMGYKGELKIADFG-------------------------------WSVHAPSLRRR--- 171
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
+ GT +Y+ PE++ + + D W GV+ YE LVG P
Sbjct: 172 --------------------XMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMP 211
Query: 773 PFLANTSAETQYKVIN 788
PF + + ET +++N
Sbjct: 212 PFDSPSHTETHRRIVN 227
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 87.4 bits (215), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 89/363 (24%), Positives = 149/363 (41%), Gaps = 88/363 (24%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCV--------GAFGEVTLVRKIDTNHLYVMKGS-- 592
G FGEV + T LY K + K GA E ++ K+ + + + +
Sbjct: 196 GGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFE 255
Query: 593 PHNNLYFVMDYIPGGDLMSLLIK----KGIFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
+L VM + GGD+ + F+EP A FY A++ +E +H+ I+RD+
Sbjct: 256 TKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDL 315
Query: 649 KPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQEC 708
KP+N+L+D DG+++++D GL ++ + ++G G
Sbjct: 316 KPENVLLDDDGNVRISDLGLAV---------------------ELKAGQTKTKGYAG--- 351
Query: 709 RCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
TP ++APE+LL Y D++++GV LYEM+
Sbjct: 352 ----------------------------TPGFMAPELLLGEEYDFSVDYFALGVTLYEMI 383
Query: 769 VGSPPFLANT----SAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLG-- 821
PF A + E + +V+ E + P + SP D L +KRLG
Sbjct: 384 AARGPFRARGEKVENKELKQRVL--EQAVTYP--DKFSPASKDFCEALLQKDPEKRLGFR 439
Query: 822 -KNASEVKAHPFFSNVDF---EKGVRTLTPPHIPR-----IQNSMDTSNFDPVDPDKLRN 872
+ ++ HP F ++ + E G+ LTPP +P +N D F V
Sbjct: 440 DGSCDGLRTHPLFRDISWRQLEAGM--LTPPFVPDSRTVYAKNIQDVGAFSTVKGVAFEK 497
Query: 873 SDS 875
+D+
Sbjct: 498 ADT 500
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 84/334 (25%), Positives = 141/334 (42%), Gaps = 83/334 (24%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCV--------GAFGEVTLVRKIDTNHLYVMKGS-- 592
G FGEV + T LY K + K GA E ++ K+ + + + +
Sbjct: 196 GGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAFE 255
Query: 593 PHNNLYFVMDYIPGGDLMSLLIK----KGIFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
+L VM + GGD+ + F+EP A FY A++ +E +H+ I+RD+
Sbjct: 256 TKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNIIYRDL 315
Query: 649 KPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQEC 708
KP+N+L+D DG+++++D GL ++ + ++G G
Sbjct: 316 KPENVLLDDDGNVRISDLGLAV---------------------ELKAGQTKTKGYAG--- 351
Query: 709 RCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
TP ++APE+LL Y D++++GV LYEM+
Sbjct: 352 ----------------------------TPGFMAPELLLGEEYDFSVDYFALGVTLYEMI 383
Query: 769 VGSPPFLANT----SAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLG-- 821
PF A + E + +V+ E + P + SP D L +KRLG
Sbjct: 384 AARGPFRARGEKVENKELKQRVL--EQAVTYP--DKFSPASKDFCEALLQKDPEKRLGFR 439
Query: 822 -KNASEVKAHPFFSNVDF---EKGVRTLTPPHIP 851
+ ++ HP F ++ + E G+ LTPP +P
Sbjct: 440 DGSCDGLRTHPLFRDISWRQLEAGM--LTPPFVP 471
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 86.7 bits (213), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 119/308 (38%), Gaps = 77/308 (25%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTI-YKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNL---- 597
G F V K+ T H Y K I K + A L R+ L H+N+
Sbjct: 15 GAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLL-----KHSNIVRLH 69
Query: 598 ---------YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
Y V D + GG+L ++ + + E A I ++ AV H+MG +HRD+
Sbjct: 70 DSISEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDL 129
Query: 649 KPDNILID---RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPG 705
KP+N+L+ + +KL DFGL + GD + W
Sbjct: 130 KPENLLLASKCKGAAVKLADFGLAI-----------EVQGD---------QQAW------ 163
Query: 706 QECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 765
GTP Y++PEVL + Y + D W+ GVILY
Sbjct: 164 --------------------------FGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILY 197
Query: 766 EMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNA 824
+LVG PPF + ++ P ++PE +LI Q+ T KR+ A
Sbjct: 198 ILLVGYPPFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRI--TA 255
Query: 825 SEVKAHPF 832
E HP+
Sbjct: 256 HEALKHPW 263
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 86.3 bits (212), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 84/305 (27%), Positives = 127/305 (41%), Gaps = 71/305 (23%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKC--VGAFGEVTLVRKIDTNHLYVMKG-----SPHN 595
G FG L+R +N L +K I + + A + ++ H +++ +P
Sbjct: 30 GNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILTP-T 88
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
+L VM+Y GG+L + G F E ARF+ +L V H M HRD+K +N L+
Sbjct: 89 HLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHRDLKLENTLL 148
Query: 656 DRD--GHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
D +K+ DFG Y +S+ H + S
Sbjct: 149 DGSPAPRLKICDFG------------YSKSSVLHSQPKST-------------------- 176
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYT-QLCDWWSVGVILYEMLVGSP 772
VGTP YIAPEVLL+ Y ++ D WS GV LY MLVG+
Sbjct: 177 ---------------------VGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAY 215
Query: 773 PF----LANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVK 828
PF +T ++++N + IP +SPE LI ++ AD + E++
Sbjct: 216 PFEDPEEPKNFRKTIHRILNVQYA--IPDYVHISPECRHLISRIFV-ADPAKRISIPEIR 272
Query: 829 AHPFF 833
H +F
Sbjct: 273 NHEWF 277
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 85.9 bits (211), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 100/234 (42%), Gaps = 63/234 (26%)
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDR 657
+ VM+ + GG+L + KK F E A + + +L AV +H +G +HRD+KP+N+L
Sbjct: 82 FLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTD 141
Query: 658 DG---HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSP 714
+ IK+ DFG ++P + N P
Sbjct: 142 ENDNLEIKIIDFGFA----------------------RLKPPD--------------NQP 165
Query: 715 LKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
LK C T +Y APE+L + GY + CD WS+GVILY ML G PF
Sbjct: 166 LK----------TPCF------TLHYAAPELLNQNGYDESCDLWSLGVILYTMLSGQVPF 209
Query: 775 ------LANTSA-ETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRL 820
L TSA E K+ + A +S E DLI L T +KRL
Sbjct: 210 QSHDRSLTCTSAVEIMKKIKKGDFSFEGEAWKNVSQEAKDLIQGLLTVDPNKRL 263
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 125/314 (39%), Gaps = 89/314 (28%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTN---HLYVMKGSPHNN--- 596
G FG L+R +N L +K I + GE KID N + + H N
Sbjct: 29 GNFGVARLMRDKQSNELVAVKYIER-----GE-----KIDENVKREIINHRSLRHPNIVR 78
Query: 597 ----------LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHR 646
L VM+Y GG+L + G F E ARF+ +L V H M HR
Sbjct: 79 FKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHR 138
Query: 647 DIKPDNILIDRD--GHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTP 704
D+K +N L+D +K+ DFG Y +S+ H + S
Sbjct: 139 DLKLENTLLDGSPAPRLKICDFG------------YSKSSVLHSQPKST----------- 175
Query: 705 GQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYT-QLCDWWSVGVI 763
VGTP YIAPEVLL+ Y ++ D WS GV
Sbjct: 176 ------------------------------VGTPAYIAPEVLLKKEYDGKVADVWSCGVT 205
Query: 764 LYEMLVGSPPF----LANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKR 819
LY MLVG+ PF +T ++++N + IP +SPE LI ++ AD
Sbjct: 206 LYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYA--IPDYVHISPECRHLISRIFV-ADPA 262
Query: 820 LGKNASEVKAHPFF 833
+ E++ H +F
Sbjct: 263 KRISIPEIRNHEWF 276
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 117/266 (43%), Gaps = 61/266 (22%)
Query: 572 FGEVTLVRKIDTNHLYVMKGSPH----NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFY 627
F EV ++R D H V++ L+ +M+++ GG L ++ + + EE +A
Sbjct: 90 FNEVVIMR--DYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVC 147
Query: 628 IAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
A L A+ +H G IHRDIK D+IL+ DG +KL+DFG C
Sbjct: 148 EAVLQ-ALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCA----------------- 189
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
+ S+ P ++ LVGTP ++APEV+
Sbjct: 190 ----------QISKDVPKRK-------------------------XLVGTPYWMAPEVIS 214
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGAD 807
R+ Y D WS+G+++ EM+ G PP+ +++ + ++ + + ++SP D
Sbjct: 215 RSLYATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRD-SPPPKLKNSHKVSPVLRD 273
Query: 808 LILQLCTGADKRLGKNASEVKAHPFF 833
+ ++ D + A E+ HPF
Sbjct: 274 FLERMLV-RDPQERATAQELLDHPFL 298
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 85.5 bits (210), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/277 (25%), Positives = 103/277 (37%), Gaps = 71/277 (25%)
Query: 574 EVTLVRKIDTNHLYVMKGSPH-----------NNLYFVMDYIPGGDLMSLLIKKGIFEEP 622
EV + +T+ L + G PH + ++ V D + G+L L +K E
Sbjct: 141 EVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEK 200
Query: 623 LARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQ 682
R + L AV +H +HRD+KP+NIL+D + I+L+DFG
Sbjct: 201 ETRSIMRSLLEAVSFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLE--------- 251
Query: 683 SNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIA 742
PG++ R L GTP Y+A
Sbjct: 252 ---------------------PGEKLR-----------------------ELCGTPGYLA 267
Query: 743 PEVL------LRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIP 796
PE+L GY + D W+ GVIL+ +L GSPPF ++ + P
Sbjct: 268 PEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPFWHRRQILMLRMIMEGQYQFSSP 327
Query: 797 AEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPFF 833
S DLI +L D A + HPFF
Sbjct: 328 EWDDRSSTVKDLISRLLQ-VDPEARLTAEQALQHPFF 363
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 91/329 (27%), Positives = 131/329 (39%), Gaps = 91/329 (27%)
Query: 528 DTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTN--- 584
D++ ++K I G FG L+R N L +K I + GE KID N
Sbjct: 17 DSDRYELVKDI--GAGNFGVARLMRDKQANELVAVKYIER-----GE-----KIDENVKR 64
Query: 585 HLYVMKGSPHNN-------------LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
+ + H N L VM+Y GG+L + G F E ARF+ +L
Sbjct: 65 EIINHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQL 124
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRD--GHIKLTDFGLCTGFRWTHNSKYYQSNGDHGR 689
V H M HRD+K +N L+D +K+ DFG Y +++ H +
Sbjct: 125 ISGVSYAHAMQVAHRDLKLENTLLDGSPAPRLKIADFG------------YSKASVLHSQ 172
Query: 690 QDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT 749
S VGTP YIAPEVLL+
Sbjct: 173 PKSA-----------------------------------------VGTPAYIAPEVLLKK 191
Query: 750 GYT-QLCDWWSVGVILYEMLVGSPPF----LANTSAETQYKVINWESCLHIPAEAQLSPE 804
Y ++ D WS GV LY MLVG+ PF +T ++++N + IP +SPE
Sbjct: 192 EYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYA--IPDYVHISPE 249
Query: 805 GADLILQLCTGADKRLGKNASEVKAHPFF 833
LI ++ AD + E++ H +F
Sbjct: 250 CRHLISRIFV-ADPAKRISIPEIRNHEWF 277
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 84.7 bits (208), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 96/240 (40%), Gaps = 58/240 (24%)
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI-- 655
Y V D + GG+L ++ + + E A I ++ +V H G +HRD+KP+N+L+
Sbjct: 79 YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLAS 138
Query: 656 -DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSP 714
+ +KL DFGL + GD + W
Sbjct: 139 KSKGAAVKLADFGLAI-----------EVQGDQ---------QAW--------------- 163
Query: 715 LKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
GTP Y++PEVL + Y + D W+ GVILY +LVG PPF
Sbjct: 164 -----------------FGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
Query: 775 LANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASEVKAHPFF 833
++ P ++PE DLI ++ T KR+ ASE HP+
Sbjct: 207 WDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRI--TASEALKHPWI 264
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 91/384 (23%), Positives = 148/384 (38%), Gaps = 120/384 (31%)
Query: 440 YIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFGEVTLVRK 499
Y+R K K+ +S F K++ +G GA+GEV L ++ + + A+K I K G R
Sbjct: 26 YVRKKEGKIGESYF-KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKG-----RY 79
Query: 500 IDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHL 559
D N K + F E ++ E++L++ +D ++
Sbjct: 80 SDDN---------KNIEKFHEE----------------------IYNEISLLKSLDHPNI 108
Query: 560 YVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIF 619
+ +++ F Y V ++ GG+L +I + F
Sbjct: 109 IKLFDVFEDKKYF-------------------------YLVTEFYEGGELFEQIINRHKF 143
Query: 620 EEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG---HIKLTDFGLCTGFRWTH 676
+E A + ++ + +HK +HRDIKP+NIL++ +IK+ DFGL + F
Sbjct: 144 DECDAANIMKQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF---- 199
Query: 677 NSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVG 736
+ D+ +D + G
Sbjct: 200 -------SKDYKLRDRL------------------------------------------G 210
Query: 737 TPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIP 796
T YIAPEV L+ Y + CD WS GVI+Y +L G PPF + KV +
Sbjct: 211 TAYYIAPEV-LKKKYNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKGKYYFDFN 269
Query: 797 AEAQLSPEGADLI-LQLCTGADKR 819
+S E +LI L L +KR
Sbjct: 270 DWKNISDEAKELIKLMLTYDYNKR 293
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 124/297 (41%), Gaps = 62/297 (20%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHNN--LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
E+++ R + H+ G +N ++ V++ L+ L ++ EP AR+Y+ ++
Sbjct: 89 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 148
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
+ +H+ IHRD+K N+ ++ D +K+ GD G
Sbjct: 149 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKI---------------------GDFGLAT 187
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
+E E + L GTPNYIAPEVL + G+
Sbjct: 188 KVEYDGERKK-------------------------------VLCGTPNYIAPEVLSKKGH 216
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ 811
+ D WS+G I+Y +LVG PPF + ET ++ E IP ++P A LI +
Sbjct: 217 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE--YSIP--KHINPVAASLIQK 272
Query: 812 LCTGADKRLGKNASEVKAHPFFSN--VDFEKGVRTLT-PPHIPRIQNSMDTSNFDPV 865
+ D +E+ FF++ + + LT PP +S+D SN P+
Sbjct: 273 MLQ-TDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAPSSLDPSNRKPL 328
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 84.3 bits (207), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 96/240 (40%), Gaps = 58/240 (24%)
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI-- 655
Y V D + GG+L ++ + + E A I ++ +V H G +HRD+KP+N+L+
Sbjct: 79 YLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLKPENLLLAS 138
Query: 656 -DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSP 714
+ +KL DFGL + GD + W
Sbjct: 139 KSKGAAVKLADFGLAI-----------EVQGDQ---------QAW--------------- 163
Query: 715 LKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
GTP Y++PEVL + Y + D W+ GVILY +LVG PPF
Sbjct: 164 -----------------FGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPF 206
Query: 775 LANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASEVKAHPFF 833
++ P ++PE DLI ++ T KR+ ASE HP+
Sbjct: 207 WDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPAKRI--TASEALKHPWI 264
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 84.0 bits (206), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 124/297 (41%), Gaps = 62/297 (20%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHNN--LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
E+++ R + H+ G +N ++ V++ L+ L ++ EP AR+Y+ ++
Sbjct: 91 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 150
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
+ +H+ IHRD+K N+ ++ D +K+ GD G
Sbjct: 151 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKI---------------------GDFGLAT 189
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
+E E + L GTPNYIAPEVL + G+
Sbjct: 190 KVEYDGERKK-------------------------------VLCGTPNYIAPEVLSKKGH 218
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ 811
+ D WS+G I+Y +LVG PPF + ET ++ E IP ++P A LI +
Sbjct: 219 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE--YSIP--KHINPVAASLIQK 274
Query: 812 LCTGADKRLGKNASEVKAHPFFSN--VDFEKGVRTLT-PPHIPRIQNSMDTSNFDPV 865
+ D +E+ FF++ + + LT PP +S+D SN P+
Sbjct: 275 MLQ-TDPTARPTINELLNDEFFTSGYIPARLPITCLTIPPRFSIAPSSLDPSNRKPL 330
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 83.6 bits (205), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 83/308 (26%), Positives = 127/308 (41%), Gaps = 75/308 (24%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAF------GEVTLVRKIDTNHLYVMK----GS 592
G FG+V LV + + V+KTI K E+ +++ +D H ++K
Sbjct: 33 GAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLD--HPNIIKIFEVFE 90
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL----TCAVESVHKMGFIHRDI 648
++N+Y VM+ GG+L+ ++ + L+ Y+AEL A+ H +H+D+
Sbjct: 91 DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHKDL 150
Query: 649 KPDNILI-DRDGH--IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPG 705
KP+NIL D H IK+ DFGL F+ S+E S G
Sbjct: 151 KPENILFQDTSPHSPIKIIDFGLAELFK----------------------SDEHSTNAAG 188
Query: 706 QECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 765
T Y+APEV R T CD WS GV++Y
Sbjct: 189 -------------------------------TALYMAPEVFKRD-VTFKCDIWSAGVVMY 216
Query: 766 EMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNAS 825
+L G PF + E Q K E + L+P+ DL+ Q+ T D +A+
Sbjct: 217 FLLTGCLPFTGTSLEEVQQKATYKEPNYAVECRP-LTPQAVDLLKQMLT-KDPERRPSAA 274
Query: 826 EVKAHPFF 833
+V H +F
Sbjct: 275 QVLHHEWF 282
Score = 33.5 bits (75), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 6/61 (9%)
Query: 90 MKTLRKADVLKRNQV--AHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGEKL 147
+KT+ K R+QV ++AE ++L D+ ++K++ F+D N+Y VM+ G +L
Sbjct: 52 IKTINK----DRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGEL 107
Query: 148 I 148
+
Sbjct: 108 L 108
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 82.8 bits (203), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 102/250 (40%), Gaps = 62/250 (24%)
Query: 592 SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
S + Y + D + GG+L ++ + + E A I ++ AV H+MG +HRD+KP+
Sbjct: 91 SEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPE 150
Query: 652 NILID---RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEW--SQGTPGQ 706
N+L+ + +KL DFGL G Q + W GTPG
Sbjct: 151 NLLLASKLKGAAVKLADFGLAIEVE--------------GEQQA------WFGFAGTPG- 189
Query: 707 ECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 766
Y++PEVL + Y + D W+ GVILY
Sbjct: 190 ---------------------------------YLSPEVLRKDPYGKPVDLWACGVILYI 216
Query: 767 MLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNAS 825
+LVG PPF ++ P ++PE DLI ++ T KR+ A+
Sbjct: 217 LLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRI--TAA 274
Query: 826 EVKAHPFFSN 835
E HP+ S+
Sbjct: 275 EALKHPWISH 284
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 82.4 bits (202), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 124/314 (39%), Gaps = 89/314 (28%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTN---HLYVMKGSPHNN--- 596
G FG L+R +N L +K I + GE KID N + + H N
Sbjct: 30 GNFGVARLMRDKQSNELVAVKYIER-----GE-----KIDENVKREIINHRSLRHPNIVR 79
Query: 597 ----------LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHR 646
L VM+Y GG+L + G F E ARF+ +L V H M HR
Sbjct: 80 FKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHR 139
Query: 647 DIKPDNILIDRD--GHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTP 704
D+K +N L+D +K+ FG Y +S+ H + S
Sbjct: 140 DLKLENTLLDGSPAPRLKICAFG------------YSKSSVLHSQPKST----------- 176
Query: 705 GQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYT-QLCDWWSVGVI 763
VGTP YIAPEVLL+ Y ++ D WS GV
Sbjct: 177 ------------------------------VGTPAYIAPEVLLKKEYDGKVADVWSCGVT 206
Query: 764 LYEMLVGSPPF----LANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKR 819
LY MLVG+ PF +T ++++N + IP +SPE LI ++ AD
Sbjct: 207 LYVMLVGAYPFEDPEEPKNFRKTIHRILNVQYA--IPDYVHISPECRHLISRIFV-ADPA 263
Query: 820 LGKNASEVKAHPFF 833
+ E++ H +F
Sbjct: 264 KRISIPEIRNHEWF 277
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 83/202 (41%), Gaps = 61/202 (30%)
Query: 594 HNNLYFVMDYIPGGDLMSLLIK----KGIFEEPLARFYIAELTCAVESVHKMG-----FI 644
+ LY VM+Y GGDL S++ K + +E + +LT A++ H+ +
Sbjct: 79 NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVL 138
Query: 645 HRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTP 704
HRD+KP N+ +D ++KL DFGL
Sbjct: 139 HRDLKPANVFLDGKQNVKLGDFGLA----------------------------------- 163
Query: 705 GQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 764
R +N H A + VGTP Y++PE + R Y + D WS+G +L
Sbjct: 164 ----RILN-------------HDTSFAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLL 206
Query: 765 YEMLVGSPPFLANTSAETQYKV 786
YE+ PPF A + E K+
Sbjct: 207 YELCALMPPFTAFSQKELAGKI 228
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 83/202 (41%), Gaps = 61/202 (30%)
Query: 594 HNNLYFVMDYIPGGDLMSLLIK----KGIFEEPLARFYIAELTCAVESVHKMG-----FI 644
+ LY VM+Y GGDL S++ K + +E + +LT A++ H+ +
Sbjct: 79 NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVL 138
Query: 645 HRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTP 704
HRD+KP N+ +D ++KL DFGL
Sbjct: 139 HRDLKPANVFLDGKQNVKLGDFGLA----------------------------------- 163
Query: 705 GQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 764
R +N H A + VGTP Y++PE + R Y + D WS+G +L
Sbjct: 164 ----RILN-------------HDTSFAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLL 206
Query: 765 YEMLVGSPPFLANTSAETQYKV 786
YE+ PPF A + E K+
Sbjct: 207 YELCALMPPFTAFSQKELAGKI 228
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 56/180 (31%)
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILID- 656
Y V D + GG+L ++ + + E A I ++ ++ H G +HR++KP+N+L+
Sbjct: 104 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLAS 163
Query: 657 --RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSP 714
+ +KL DFGL + SE W
Sbjct: 164 KAKGAAVKLADFGLAI---------------------EVNDSEAW--------------- 187
Query: 715 LKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
H GTP Y++PEVL + Y++ D W+ GVILY +LVG PPF
Sbjct: 188 -----------------HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 230
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 81.6 bits (200), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/312 (27%), Positives = 123/312 (39%), Gaps = 85/312 (27%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTN---HLYVMKGSPHNN--- 596
G FG L+R +N L +K I + GE KID N + + H N
Sbjct: 30 GNFGVARLMRDKQSNELVAVKYIER-----GE-----KIDENVKREIINHRSLRHPNIVR 79
Query: 597 ----------LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHR 646
L VM+Y GG+L + G F E ARF+ +L V H M HR
Sbjct: 80 FKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQVCHR 139
Query: 647 DIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQ 706
D+K +N L+D +L +C F ++ +S + D
Sbjct: 140 DLKLENTLLDGSPAPRLK---IC-AFGYSKSSVLHSQPKD-------------------- 175
Query: 707 ECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYT-QLCDWWSVGVILY 765
VGTP YIAPEVLL+ Y ++ D WS GV LY
Sbjct: 176 ---------------------------TVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLY 208
Query: 766 EMLVGSPPF----LANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLG 821
MLVG+ PF +T ++++N + IP +SPE LI ++ AD
Sbjct: 209 VMLVGAYPFEDPEEPKNFRKTIHRILNVQYA--IPDYVHISPECRHLISRIFV-ADPAKR 265
Query: 822 KNASEVKAHPFF 833
+ E++ H +F
Sbjct: 266 ISIPEIRNHEWF 277
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 89/219 (40%), Gaps = 55/219 (25%)
Query: 621 EPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI--DRDGHIKLTDFGLCTGFRWTHNS 678
E L + ++ A+ +H G HRDIKP+N L ++ IKL DFGL F +N
Sbjct: 167 EKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNG 226
Query: 679 KYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTP 738
+YY + GTP
Sbjct: 227 EYYGMT------------------------------------------------TKAGTP 238
Query: 739 NYIAPEVLLRTG--YTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIP 796
++APEVL T Y CD WS GV+L+ +L+G+ PF A+T +V+N + C P
Sbjct: 239 YFVAPEVLNTTNESYGPKCDAWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCFENP 298
Query: 797 AEAQLSPEGADLILQLCT-GADKRLGKNASEVKAHPFFS 834
LSP DL+ L D+R +A HP+ S
Sbjct: 299 NYNVLSPLARDLLSNLLNRNVDERF--DAMRALQHPWIS 335
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 88/355 (24%), Positives = 142/355 (40%), Gaps = 100/355 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVG-----VFGEVTLVRKIDTNHLYVMKTIYKCVG 570
GA+ +V + Y +K I K G VF EV +T+Y+C G
Sbjct: 24 GAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREV--------------ETLYQCQG 69
Query: 571 AFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAE 630
+ L+ + + Y V + + GG +++ + K+ F E A + +
Sbjct: 70 NKNILELIEFFEDD----------TRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRD 119
Query: 631 LTCAVESVHKMGFIHRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
+ A++ +H G HRD+KP+NIL ++ +K+ DF L +G + ++
Sbjct: 120 VAAALDFLHTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNS---------- 169
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVL- 746
C I +P + G+ Y+APEV+
Sbjct: 170 --------------------CTPITTP---------------ELTTPCGSAEYMAPEVVE 194
Query: 747 ----LRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAE-----------TQYKVIN--W 789
T Y + CD WS+GV+LY ML G PPF+ + A+ Q K+
Sbjct: 195 VFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQ 254
Query: 790 ESCLHIPAE--AQLSPEGADLILQLCT-GADKRLGKNASEVKAHPFFSNVDFEKG 841
E P + A +S E DLI +L A +RL +A++V HP+ EKG
Sbjct: 255 EGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRL--SAAQVLQHPWVQGQAPEKG 307
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 57/197 (28%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL- 654
++Y V + + GG+L+ ++++ F E A F + + VE +H G +HRD+KP NIL
Sbjct: 95 HVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILY 154
Query: 655 IDRDGH---IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCI 711
+D G+ +++ DFG R +E TP C
Sbjct: 155 VDESGNPECLRICDFGFAKQLR----------------------AENGLLMTP---CYTA 189
Query: 712 NSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGS 771
N ++APEVL R GY + CD WS+G++LY ML G
Sbjct: 190 N---------------------------FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGY 222
Query: 772 PPFLANTSAETQYKVIN 788
PF AN ++T +++
Sbjct: 223 TPF-ANGPSDTPEEILT 238
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 81.3 bits (199), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 87/197 (44%), Gaps = 57/197 (28%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL- 654
++Y V + + GG+L+ ++++ F E A F + + VE +H G +HRD+KP NIL
Sbjct: 95 HVYLVTELMRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILY 154
Query: 655 IDRDGH---IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCI 711
+D G+ +++ DFG R +E TP C
Sbjct: 155 VDESGNPECLRICDFGFAKQLR----------------------AENGLLMTP---CYTA 189
Query: 712 NSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGS 771
N ++APEVL R GY + CD WS+G++LY ML G
Sbjct: 190 N---------------------------FVAPEVLKRQGYDEGCDIWSLGILLYTMLAGY 222
Query: 772 PPFLANTSAETQYKVIN 788
PF AN ++T +++
Sbjct: 223 TPF-ANGPSDTPEEILT 238
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 102/250 (40%), Gaps = 62/250 (24%)
Query: 592 SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
S + Y + D + GG+L ++ + + E A I ++ AV H+MG +HR++KP+
Sbjct: 80 SEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLKPE 139
Query: 652 NILID---RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEW--SQGTPGQ 706
N+L+ + +KL DFGL G Q + W GTPG
Sbjct: 140 NLLLASKLKGAAVKLADFGLAIEVE--------------GEQQA------WFGFAGTPG- 178
Query: 707 ECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 766
Y++PEVL + Y + D W+ GVILY
Sbjct: 179 ---------------------------------YLSPEVLRKDPYGKPVDLWACGVILYI 205
Query: 767 MLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNAS 825
+LVG PPF ++ P ++PE DLI ++ T KR+ A+
Sbjct: 206 LLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEWDTVTPEAKDLINKMLTINPSKRI--TAA 263
Query: 826 EVKAHPFFSN 835
E HP+ S+
Sbjct: 264 EALKHPWISH 273
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 82/345 (23%), Positives = 131/345 (37%), Gaps = 97/345 (28%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGA---- 571
G++G V L + N Y MK V + L+R+ + G
Sbjct: 24 GSYGVVKLAYNENDNTYYAMK-------VLSKKKLIRQAGFPRRPPPRGTRPAPGGCIQP 76
Query: 572 -------FGEVTLVRKIDTNHLY----VMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFE 620
+ E+ +++K+D ++ V+ ++LY V + + G +M + K + E
Sbjct: 77 RGPIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSE 136
Query: 621 EPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKY 680
+ ARFY +L +E +H IHRDIKP N+L+ DGHIK+ DFG+ F+ +
Sbjct: 137 DQ-ARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSD---- 191
Query: 681 YQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNY 740
L + VGTP +
Sbjct: 192 ------------------------------------------------ALLSNTVGTPAF 203
Query: 741 IAPEVLLRTGYT---QLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLH--I 795
+APE L T + D W++GV LY + G PF+ CLH I
Sbjct: 204 MAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIM-----------CLHSKI 252
Query: 796 PAEAQLSPEGADLILQLCTGADKRLGKN------ASEVKAHPFFS 834
++A P+ D+ L + L KN E+K HP+ +
Sbjct: 253 KSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 104/261 (39%), Gaps = 71/261 (27%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNN------ 596
G FG+ LV+ + YV+K I + E R+ + V+ H N
Sbjct: 35 GSFGKAILVKSTEDGRQYVIKEINISRMSSKE----REESRREVAVLANMKHPNIVQYRE 90
Query: 597 -------LYFVMDYIPGGDLMSLL-IKKGI-FEEPLARFYIAELTCAVESVHKMGFIHRD 647
LY VMDY GGDL + +KG+ F+E + ++ A++ VH +HRD
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRD 150
Query: 648 IKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
IK NI + +DG ++L DFG+
Sbjct: 151 IKSQNIFLTKDGTVQLGDFGI--------------------------------------- 171
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 767
R +NS ++ LA + +GTP Y++PE+ Y D W++G +LYE+
Sbjct: 172 ARVLNSTVE-------------LARACIGTPYYLSPEICENKPYNNKSDIWALGCVLYEL 218
Query: 768 LVGSPPFLANTSAETQYKVIN 788
F A + K+I+
Sbjct: 219 CTLKHAFEAGSMKNLVLKIIS 239
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 56/180 (31%)
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILID- 656
Y V D + GG+L ++ + + E A I ++ ++ H G +HR++KP+N+L+
Sbjct: 80 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLAS 139
Query: 657 --RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSP 714
+ +KL DFGL + SE W
Sbjct: 140 KAKGAAVKLADFGLAI---------------------EVNDSEAW--------------- 163
Query: 715 LKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
H GTP Y++PEVL + Y++ D W+ GVILY +LVG PPF
Sbjct: 164 -----------------HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 206
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 80.9 bits (198), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 82/202 (40%), Gaps = 61/202 (30%)
Query: 594 HNNLYFVMDYIPGGDLMSLLIK----KGIFEEPLARFYIAELTCAVESVHKMG-----FI 644
+ LY VM+Y GGDL S++ K + +E + +LT A++ H+ +
Sbjct: 79 NTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRSDGGHTVL 138
Query: 645 HRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTP 704
HRD+KP N+ +D ++KL DFGL
Sbjct: 139 HRDLKPANVFLDGKQNVKLGDFGLA----------------------------------- 163
Query: 705 GQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 764
R +N H A VGTP Y++PE + R Y + D WS+G +L
Sbjct: 164 ----RILN-------------HDEDFAKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLL 206
Query: 765 YEMLVGSPPFLANTSAETQYKV 786
YE+ PPF A + E K+
Sbjct: 207 YELCALMPPFTAFSQKELAGKI 228
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 56/180 (31%)
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILID- 656
Y V D + GG+L ++ + + E A I ++ ++ H G +HR++KP+N+L+
Sbjct: 81 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLAS 140
Query: 657 --RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSP 714
+ +KL DFGL + SE W
Sbjct: 141 KAKGAAVKLADFGLAI---------------------EVNDSEAW--------------- 164
Query: 715 LKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
H GTP Y++PEVL + Y++ D W+ GVILY +LVG PPF
Sbjct: 165 -----------------HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 61/252 (24%)
Query: 543 GVFGEVTL-VRKIDTNHLYV----MKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--- 594
G +GEV L V ++ + V MK C + + K+ NH V+K H
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-LNHENVVKFYGHRRE 75
Query: 595 -NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
N Y ++Y GG+L + EP A+ + +L V +H +G HRDIKP+N+
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L+D ++K++DFGL T FR+ + +
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRER---------------------------------- 161
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY-TQLCDWWSVGVILYEMLVGSP 772
L + + GT Y+APE+L R + + D WS G++L ML G
Sbjct: 162 ----------------LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 773 PFLANTSAETQY 784
P+ + + +Y
Sbjct: 206 PWDQPSDSXQEY 217
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 75/180 (41%), Gaps = 56/180 (31%)
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILID- 656
Y V D + GG+L ++ + + E A I ++ ++ H G +HR++KP+N+L+
Sbjct: 81 YLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLKPENLLLAS 140
Query: 657 --RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSP 714
+ +KL DFGL + SE W
Sbjct: 141 KAKGAAVKLADFGLAI---------------------EVNDSEAW--------------- 164
Query: 715 LKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
H GTP Y++PEVL + Y++ D W+ GVILY +LVG PPF
Sbjct: 165 -----------------HGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 102/241 (42%), Gaps = 58/241 (24%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHNN--LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
E+++ R + H+ G +N ++ V++ L+ L ++ EP AR+Y+ ++
Sbjct: 65 EISIHRSLAHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQI 124
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
+ +H+ IHRD+K N+ ++ D +K+ GD G
Sbjct: 125 VLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKI---------------------GDFGLAT 163
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
+E E + L GTPNYIAPEVL + G+
Sbjct: 164 KVEYDGERKK-------------------------------VLCGTPNYIAPEVLSKKGH 192
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQ 811
+ D WS+G I+Y +LVG PPF + ET ++ E IP ++P A LI +
Sbjct: 193 SFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIKKNE--YSIP--KHINPVAASLIQK 248
Query: 812 L 812
+
Sbjct: 249 M 249
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 61/252 (24%)
Query: 543 GVFGEVTL-VRKIDTNHLYV----MKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--- 594
G +GEV L V ++ + V MK C + + K+ NH V+K H
Sbjct: 16 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-LNHENVVKFYGHRRE 74
Query: 595 -NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
N Y ++Y GG+L + EP A+ + +L V +H +G HRDIKP+N+
Sbjct: 75 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 134
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L+D ++K++DFGL T FR+ + +
Sbjct: 135 LLDERDNLKISDFGLATVFRYNNRER---------------------------------- 160
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY-TQLCDWWSVGVILYEMLVGSP 772
L + + GT Y+APE+L R + + D WS G++L ML G
Sbjct: 161 ----------------LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 204
Query: 773 PFLANTSAETQY 784
P+ + + +Y
Sbjct: 205 PWDQPSDSCQEY 216
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 61/252 (24%)
Query: 543 GVFGEVTL-VRKIDTNHLYV----MKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--- 594
G +GEV L V ++ + V MK C + + K+ NH V+K H
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-LNHENVVKFYGHRRE 75
Query: 595 -NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
N Y ++Y GG+L + EP A+ + +L V +H +G HRDIKP+N+
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L+D ++K++DFGL T FR+ + +
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRER---------------------------------- 161
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY-TQLCDWWSVGVILYEMLVGSP 772
L + + GT Y+APE+L R + + D WS G++L ML G
Sbjct: 162 ----------------LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 773 PFLANTSAETQY 784
P+ + + +Y
Sbjct: 206 PWDQPSDSCQEY 217
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 112/287 (39%), Gaps = 71/287 (24%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMK---- 590
G FGEV L + T +K I K EV L++++D H +MK
Sbjct: 37 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD--HPNIMKLYEF 94
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKP 650
Y V + GG+L +I + F E A I ++ + +HK +HRD+KP
Sbjct: 95 FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKP 154
Query: 651 DNILID---RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
+N+L++ +D +I++ D G E S++
Sbjct: 155 ENLLLESKSKDANIRII---------------------DFGLSTHFEASKKMKDK----- 188
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 767
+GT YIAPEVL T Y + CD WS GVILY +
Sbjct: 189 ---------------------------IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYIL 220
Query: 768 LVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT 814
L G PPF + KV + +P ++S DLI ++ T
Sbjct: 221 LSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLT 267
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 61/252 (24%)
Query: 543 GVFGEVTL-VRKIDTNHLYV----MKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--- 594
G +GEV L V ++ + V MK C + + K+ NH V+K H
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-LNHENVVKFYGHRRE 75
Query: 595 -NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
N Y ++Y GG+L + EP A+ + +L V +H +G HRDIKP+N+
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L+D ++K++DFGL T FR+ + +
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRER---------------------------------- 161
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY-TQLCDWWSVGVILYEMLVGSP 772
L + + GT Y+APE+L R + + D WS G++L ML G
Sbjct: 162 ----------------LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 773 PFLANTSAETQY 784
P+ + + +Y
Sbjct: 206 PWDQPSDSCQEY 217
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 61/252 (24%)
Query: 543 GVFGEVTL-VRKIDTNHLYV----MKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--- 594
G +GEV L V ++ + V MK C + + K+ NH V+K H
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKM-LNHENVVKFYGHRRE 75
Query: 595 -NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
N Y ++Y GG+L + EP A+ + +L V +H +G HRDIKP+N+
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L+D ++K++DFGL T FR+ + +
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRER---------------------------------- 161
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY-TQLCDWWSVGVILYEMLVGSP 772
L + + GT Y+APE+L R + + D WS G++L ML G
Sbjct: 162 ----------------LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 773 PFLANTSAETQY 784
P+ + + +Y
Sbjct: 206 PWDQPSDSCQEY 217
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 61/252 (24%)
Query: 543 GVFGEVTL-VRKIDTNHLYV----MKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--- 594
G +GEV L V ++ + V MK C + + K+ NH V+K H
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-LNHENVVKFYGHRRE 76
Query: 595 -NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
N Y ++Y GG+L + EP A+ + +L V +H +G HRDIKP+N+
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 136
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L+D ++K++DFGL T FR+ + +
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRER---------------------------------- 162
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY-TQLCDWWSVGVILYEMLVGSP 772
L + + GT Y+APE+L R + + D WS G++L ML G
Sbjct: 163 ----------------LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 773 PFLANTSAETQY 784
P+ + + +Y
Sbjct: 207 PWDQPSDSCQEY 218
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 79.7 bits (195), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 61/252 (24%)
Query: 543 GVFGEVTL-VRKIDTNHLYV----MKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--- 594
G +GEV L V ++ + V MK C + + K+ NH V+K H
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-LNHENVVKFYGHRRE 76
Query: 595 -NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
N Y ++Y GG+L + EP A+ + +L V +H +G HRDIKP+N+
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 136
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L+D ++K++DFGL T FR+ + +
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRER---------------------------------- 162
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY-TQLCDWWSVGVILYEMLVGSP 772
L + + GT Y+APE+L R + + D WS G++L ML G
Sbjct: 163 ----------------LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 773 PFLANTSAETQY 784
P+ + + +Y
Sbjct: 207 PWDQPSDSCQEY 218
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 79.7 bits (195), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 108/252 (42%), Gaps = 51/252 (20%)
Query: 546 GEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKID-----TNHLYVMKGSPHNNLYFV 600
GEV V+KI + F E+ ++ ++ N L V++ ++Y V
Sbjct: 34 GEVVAVKKI----FDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRADNDRDVYLV 89
Query: 601 MDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH 660
DY+ + +I+ I E ++ + +L ++ +H G +HRD+KP NIL++ + H
Sbjct: 90 FDYMETD--LHAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHRDMKPSNILLNAECH 147
Query: 661 IKLTDFGLCTGF----RWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLK 716
+K+ DFGL F R T+N + E +E + P
Sbjct: 148 VKVADFGLSRSFVNIRRVTNNIPLSIN----------ENTENFDDDQP------------ 185
Query: 717 PLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYEMLVGSPPFL 775
+ V T Y APE+LL T YT+ D WS+G IL E+L G P F
Sbjct: 186 -------------ILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFP 232
Query: 776 ANTSAETQYKVI 787
+++ ++I
Sbjct: 233 GSSTMNQLERII 244
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 84/331 (25%), Positives = 141/331 (42%), Gaps = 78/331 (23%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEV 575
G+FG+V L T +K I + L++K D H+ V + I +
Sbjct: 20 GSFGKVKLATHYKTQQKVALKFISR--------QLLKKSDM-HMRVEREI-------SYL 63
Query: 576 TLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAV 635
L+R LY + +P ++ V++Y GG+L +++K E R + ++ CA+
Sbjct: 64 KLLRHPHIIKLYDVITTP-TDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQQIICAI 121
Query: 636 ESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEP 695
E H+ +HRD+KP+N+L+D + ++K+ DFGL ++G+ +
Sbjct: 122 EYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSN----------IMTDGNFLKT----- 166
Query: 696 SEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ-L 754
S G+P NY APEV+ Y
Sbjct: 167 ----SCGSP----------------------------------NYAAPEVINGKLYAGPE 188
Query: 755 CDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT 814
D WS G++LY MLVG PF + +K +N SC+++ + LSP LI ++
Sbjct: 189 VDVWSCGIVLYVMLVGRLPF-DDEFIPNLFKKVN--SCVYVMPDF-LSPGAQSLIRRMIV 244
Query: 815 GADKRLGKNASEVKAHPFFSNVDFEKGVRTL 845
AD E++ P+F NV+ +R +
Sbjct: 245 -ADPMQRITIQEIRRDPWF-NVNLPDYLRPM 273
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 61/252 (24%)
Query: 543 GVFGEVTL-VRKIDTNHLYV----MKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--- 594
G +GEV L V ++ + V MK C + + K+ NH V+K H
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-LNHENVVKFYGHRRE 76
Query: 595 -NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
N Y ++Y GG+L + EP A+ + +L V +H +G HRDIKP+N+
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 136
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L+D ++K++DFGL T FR+ + +
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRER---------------------------------- 162
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY-TQLCDWWSVGVILYEMLVGSP 772
L + + GT Y+APE+L R + + D WS G++L ML G
Sbjct: 163 ----------------LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 773 PFLANTSAETQY 784
P+ + + +Y
Sbjct: 207 PWDQPSDSCQEY 218
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 61/252 (24%)
Query: 543 GVFGEVTL-VRKIDTNHLYV----MKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--- 594
G +GEV L V ++ + V MK C + + K+ NH V+K H
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-LNHENVVKFYGHRRE 76
Query: 595 -NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
N Y ++Y GG+L + EP A+ + +L V +H +G HRDIKP+N+
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 136
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L+D ++K++DFGL T FR+ + +
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRER---------------------------------- 162
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY-TQLCDWWSVGVILYEMLVGSP 772
L + + GT Y+APE+L R + + D WS G++L ML G
Sbjct: 163 ----------------LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 773 PFLANTSAETQY 784
P+ + + +Y
Sbjct: 207 PWDQPSDSCQEY 218
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 61/252 (24%)
Query: 543 GVFGEVTL-VRKIDTNHLYV----MKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--- 594
G +GEV L V ++ + V MK C + + K+ NH V+K H
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKM-LNHENVVKFYGHRRE 75
Query: 595 -NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
N Y ++Y GG+L + EP A+ + +L V +H +G HRDIKP+N+
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L+D ++K++DFGL T FR+ + +
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRER---------------------------------- 161
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY-TQLCDWWSVGVILYEMLVGSP 772
L + + GT Y+APE+L R + + D WS G++L ML G
Sbjct: 162 ----------------LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 773 PFLANTSAETQY 784
P+ + + +Y
Sbjct: 206 PWDQPSDSCQEY 217
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 61/252 (24%)
Query: 543 GVFGEVTL-VRKIDTNHLYV----MKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--- 594
G +GEV L V ++ + V MK C + + K+ NH V+K H
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-LNHENVVKFYGHRRE 75
Query: 595 -NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
N Y ++Y GG+L + EP A+ + +L V +H +G HRDIKP+N+
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L+D ++K++DFGL T FR+ + +
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRER---------------------------------- 161
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY-TQLCDWWSVGVILYEMLVGSP 772
L + + GT Y+APE+L R + + D WS G++L ML G
Sbjct: 162 ----------------LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 773 PFLANTSAETQY 784
P+ + + +Y
Sbjct: 206 PWDQPSDSCQEY 217
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 61/252 (24%)
Query: 543 GVFGEVTL-VRKIDTNHLYV----MKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--- 594
G +GEV L V ++ + V MK C + + K+ NH V+K H
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-LNHENVVKFYGHRRE 76
Query: 595 -NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
N Y ++Y GG+L + EP A+ + +L V +H +G HRDIKP+N+
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 136
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L+D ++K++DFGL T FR+ + +
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRER---------------------------------- 162
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY-TQLCDWWSVGVILYEMLVGSP 772
L + + GT Y+APE+L R + + D WS G++L ML G
Sbjct: 163 ----------------LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 773 PFLANTSAETQY 784
P+ + + +Y
Sbjct: 207 PWDQPSDSCQEY 218
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 112/287 (39%), Gaps = 71/287 (24%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCV--------GAFGEVTLVRKIDTNHLYVMK---- 590
G FGEV L + T +K I K EV L++++D H +MK
Sbjct: 43 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD--HPNIMKLYEF 100
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKP 650
Y V + GG+L +I + F E A I ++ + +HK +HRD+KP
Sbjct: 101 FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKP 160
Query: 651 DNILID---RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
+N+L++ +D +I++ D G E S++
Sbjct: 161 ENLLLESKSKDANIRII---------------------DFGLSTHFEASKKMKDK----- 194
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 767
+GT YIAPEVL T Y + CD WS GVILY +
Sbjct: 195 ---------------------------IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYIL 226
Query: 768 LVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT 814
L G PPF + KV + +P ++S DLI ++ T
Sbjct: 227 LSGCPPFNGANEYDILKKVEKGKYTFELPQWKKVSESAKDLIRKMLT 273
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 61/252 (24%)
Query: 543 GVFGEVTL-VRKIDTNHLYV----MKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--- 594
G +GEV L V ++ + V MK C + + K+ NH V+K H
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-LNHENVVKFYGHRRE 75
Query: 595 -NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
N Y ++Y GG+L + EP A+ + +L V +H +G HRDIKP+N+
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L+D ++K++DFGL T FR+ + +
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRER---------------------------------- 161
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY-TQLCDWWSVGVILYEMLVGSP 772
L + + GT Y+APE+L R + + D WS G++L ML G
Sbjct: 162 ----------------LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 773 PFLANTSAETQY 784
P+ + + +Y
Sbjct: 206 PWDQPSDSCQEY 217
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 61/252 (24%)
Query: 543 GVFGEVTL-VRKIDTNHLYV----MKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--- 594
G +GEV L V ++ + V MK C + + K+ NH V+K H
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-LNHENVVKFYGHRRE 75
Query: 595 -NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
N Y ++Y GG+L + EP A+ + +L V +H +G HRDIKP+N+
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L+D ++K++DFGL T FR+ + +
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRER---------------------------------- 161
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY-TQLCDWWSVGVILYEMLVGSP 772
L + + GT Y+APE+L R + + D WS G++L ML G
Sbjct: 162 ----------------LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 773 PFLANTSAETQY 784
P+ + + +Y
Sbjct: 206 PWDQPSDSCQEY 217
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 79.3 bits (194), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 61/252 (24%)
Query: 543 GVFGEVTL-VRKIDTNHLYV----MKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--- 594
G +GEV L V ++ + V MK C + + K+ NH V+K H
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKM-LNHENVVKFYGHRRE 76
Query: 595 -NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
N Y ++Y GG+L + EP A+ + +L V +H +G HRDIKP+N+
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 136
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L+D ++K++DFGL T FR+ + +
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRER---------------------------------- 162
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY-TQLCDWWSVGVILYEMLVGSP 772
L + + GT Y+APE+L R + + D WS G++L ML G
Sbjct: 163 ----------------LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 773 PFLANTSAETQY 784
P+ + + +Y
Sbjct: 207 PWDQPSDSCQEY 218
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 61/252 (24%)
Query: 543 GVFGEVTL-VRKIDTNHLYV----MKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--- 594
G +GEV L V ++ + V MK C + + K+ NH V+K H
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-LNHENVVKFYGHRRE 75
Query: 595 -NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
N Y ++Y GG+L + EP A+ + +L V +H +G HRDIKP+N+
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L+D ++K++DFGL T FR+ + +
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRER---------------------------------- 161
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY-TQLCDWWSVGVILYEMLVGSP 772
L + + GT Y+APE+L R + + D WS G++L ML G
Sbjct: 162 ----------------LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 773 PFLANTSAETQY 784
P+ + + +Y
Sbjct: 206 PWDQPSDSCQEY 217
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 61/252 (24%)
Query: 543 GVFGEVTL-VRKIDTNHLYV----MKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--- 594
G +GEV L V ++ + V MK C + + K+ NH V+K H
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-LNHENVVKFYGHRRE 75
Query: 595 -NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
N Y ++Y GG+L + EP A+ + +L V +H +G HRDIKP+N+
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L+D ++K++DFGL T FR+ + +
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRER---------------------------------- 161
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY-TQLCDWWSVGVILYEMLVGSP 772
L + + GT Y+APE+L R + + D WS G++L ML G
Sbjct: 162 ----------------LLNKMXGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 773 PFLANTSAETQY 784
P+ + + +Y
Sbjct: 206 PWDQPSDSCQEY 217
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 79.3 bits (194), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 61/252 (24%)
Query: 543 GVFGEVTL-VRKIDTNHLYV----MKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--- 594
G +GEV L V ++ + V MK C + + K+ NH V+K H
Sbjct: 17 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-LNHENVVKFYGHRRE 75
Query: 595 -NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
N Y ++Y GG+L + EP A+ + +L V +H +G HRDIKP+N+
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L+D ++K++DFGL T FR+ + +
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRER---------------------------------- 161
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY-TQLCDWWSVGVILYEMLVGSP 772
L + + GT Y+APE+L R + + D WS G++L ML G
Sbjct: 162 ----------------LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 773 PFLANTSAETQY 784
P+ + + +Y
Sbjct: 206 PWDQPSDSCQEY 217
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 63/245 (25%), Positives = 101/245 (41%), Gaps = 66/245 (26%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTI----YKCVGAFGEV-------TLVRKIDTNHLYVMK 590
VG FG+V + + T H +K + + + G++ L R LY +
Sbjct: 26 VGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVI 85
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKP 650
+P ++++ VM+Y+ GG+L + K G +E +R ++ V+ H+ +HRD+KP
Sbjct: 86 STP-SDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRDLKP 144
Query: 651 DNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRC 710
+N+L+D + K+ DFGL S+G+ R
Sbjct: 145 ENVLLDAHMNAKIADFGLSN----------MMSDGEFLRXS------------------- 175
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYT-QLCDWWSVGVILYEMLV 769
G+PNY APEV+ Y D WS GVILY +L
Sbjct: 176 ------------------------CGSPNYAAPEVISGRLYAGPEVDIWSSGVILYALLC 211
Query: 770 GSPPF 774
G+ PF
Sbjct: 212 GTLPF 216
Score = 30.0 bits (66), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 16/65 (24%), Positives = 31/65 (47%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
T H A+K L + + + V ++ E L + ++KLY +++ VM+Y+
Sbjct: 40 TGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVISTPSDIFMVMEYVS 99
Query: 144 GEKLI 148
G +L
Sbjct: 100 GGELF 104
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 57/195 (29%), Positives = 84/195 (43%), Gaps = 57/195 (29%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL-I 655
+Y V + + GG+L+ ++++ F E A + +T VE +H G +HRD+KP NIL +
Sbjct: 91 VYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYV 150
Query: 656 DRDGH---IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
D G+ I++ DFG R +E TP C N
Sbjct: 151 DESGNPESIRICDFGFAKQLR----------------------AENGLLMTP---CYTAN 185
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
++APEVL R GY CD WS+GV+LY ML G
Sbjct: 186 ---------------------------FVAPEVLERQGYDAACDIWSLGVLLYTMLTGYT 218
Query: 773 PFLANTSAETQYKVI 787
PF AN +T +++
Sbjct: 219 PF-ANGPDDTPEEIL 232
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 79.3 bits (194), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 104/252 (41%), Gaps = 61/252 (24%)
Query: 543 GVFGEVTL-VRKIDTNHLYV----MKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--- 594
G +GEV L V ++ + V MK C + + K+ NH V+K H
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-LNHENVVKFYGHRRE 76
Query: 595 -NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
N Y ++Y GG+L + EP A+ + +L V +H +G HRDIKP+N+
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 136
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L+D ++K++DFGL T FR+ + +
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRER---------------------------------- 162
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY-TQLCDWWSVGVILYEMLVGSP 772
L + + GT Y+APE+L R + + D WS G++L ML G
Sbjct: 163 ----------------LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 773 PFLANTSAETQY 784
P+ + + +Y
Sbjct: 207 PWDQPSDSCQEY 218
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 99/245 (40%), Gaps = 66/245 (26%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTI----YKCVGAFGEVT-------LVRKIDTNHLYVMK 590
VG FG+V + T H +K + + + G++ L R LY +
Sbjct: 21 VGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVI 80
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKP 650
+P + + VM+Y+ GG+L + K G EE AR ++ AV+ H+ +HRD+KP
Sbjct: 81 STP-TDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKP 139
Query: 651 DNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRC 710
+N+L+D + K+ DFGL S+G+ R
Sbjct: 140 ENVLLDAHMNAKIADFGLSN----------MMSDGEFLRDSC------------------ 171
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ-LCDWWSVGVILYEMLV 769
G+PNY APEV+ Y D WS GVILY +L
Sbjct: 172 -------------------------GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLC 206
Query: 770 GSPPF 774
G+ PF
Sbjct: 207 GTLPF 211
Score = 30.8 bits (68), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 30/65 (46%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
T H A+K L + + + V +K E L + ++KLY + + VM+Y+
Sbjct: 35 TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94
Query: 144 GEKLI 148
G +L
Sbjct: 95 GGELF 99
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 66/245 (26%), Positives = 99/245 (40%), Gaps = 66/245 (26%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTI----YKCVGAFGEVT-------LVRKIDTNHLYVMK 590
VG FG+V + T H +K + + + G++ L R LY +
Sbjct: 21 VGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVI 80
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKP 650
+P + + VM+Y+ GG+L + K G EE AR ++ AV+ H+ +HRD+KP
Sbjct: 81 STP-TDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDLKP 139
Query: 651 DNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRC 710
+N+L+D + K+ DFGL S+G+ R
Sbjct: 140 ENVLLDAHMNAKIADFGLSN----------MMSDGEFLRTSC------------------ 171
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ-LCDWWSVGVILYEMLV 769
G+PNY APEV+ Y D WS GVILY +L
Sbjct: 172 -------------------------GSPNYAAPEVISGRLYAGPEVDIWSCGVILYALLC 206
Query: 770 GSPPF 774
G+ PF
Sbjct: 207 GTLPF 211
Score = 30.8 bits (68), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 30/65 (46%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
T H A+K L + + + V +K E L + ++KLY + + VM+Y+
Sbjct: 35 TGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVISTPTDFFMVMEYVS 94
Query: 144 GEKLI 148
G +L
Sbjct: 95 GGELF 99
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 110/266 (41%), Gaps = 59/266 (22%)
Query: 572 FGEVTLVRKIDTNHLYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIA 629
F EV ++R ++ M S + L+ VM+++ GG L ++ + EE +A +A
Sbjct: 76 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA 135
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGR 689
L A+ +H G IHRDIK D+IL+ DG +KL+DFG C
Sbjct: 136 VLQ-ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA------------------- 175
Query: 690 QDSME-PSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLR 748
Q S E P + GTP ++APE++ R
Sbjct: 176 QVSKEVPRRKXLVGTP----------------------------------YWMAPELISR 201
Query: 749 TGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADL 808
Y D WS+G+++ EM+ G PP+ N K+I + ++SP
Sbjct: 202 LPYGPEVDIWSLGIMVIEMVDGEPPYF-NEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGF 260
Query: 809 ILQLCTGADKRLGKNASEVKAHPFFS 834
+ +L D A+E+ HPF +
Sbjct: 261 LDRLLV-RDPAQRATAAELLKHPFLA 285
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 110/266 (41%), Gaps = 59/266 (22%)
Query: 572 FGEVTLVRKIDTNHLYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIA 629
F EV ++R ++ M S + L+ VM+++ GG L ++ + EE +A +A
Sbjct: 74 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA 133
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGR 689
L A+ +H G IHRDIK D+IL+ DG +KL+DFG C
Sbjct: 134 VLQ-ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA------------------- 173
Query: 690 QDSME-PSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLR 748
Q S E P + GTP ++APE++ R
Sbjct: 174 QVSKEVPRRKXLVGTP----------------------------------YWMAPELISR 199
Query: 749 TGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADL 808
Y D WS+G+++ EM+ G PP+ N K+I + ++SP
Sbjct: 200 LPYGPEVDIWSLGIMVIEMVDGEPPYF-NEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGF 258
Query: 809 ILQLCTGADKRLGKNASEVKAHPFFS 834
+ +L D A+E+ HPF +
Sbjct: 259 LDRLLV-RDPAQRATAAELLKHPFLA 283
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 110/266 (41%), Gaps = 59/266 (22%)
Query: 572 FGEVTLVRKIDTNHLYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIA 629
F EV ++R ++ M S + L+ VM+++ GG L ++ + EE +A +A
Sbjct: 69 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA 128
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGR 689
L A+ +H G IHRDIK D+IL+ DG +KL+DFG C
Sbjct: 129 VLQ-ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA------------------- 168
Query: 690 QDSME-PSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLR 748
Q S E P + GTP ++APE++ R
Sbjct: 169 QVSKEVPRRKXLVGTP----------------------------------YWMAPELISR 194
Query: 749 TGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADL 808
Y D WS+G+++ EM+ G PP+ N K+I + ++SP
Sbjct: 195 LPYGPEVDIWSLGIMVIEMVDGEPPYF-NEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGF 253
Query: 809 ILQLCTGADKRLGKNASEVKAHPFFS 834
+ +L D A+E+ HPF +
Sbjct: 254 LDRLLV-RDPAQRATAAELLKHPFLA 278
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 110/266 (41%), Gaps = 59/266 (22%)
Query: 572 FGEVTLVRKIDTNHLYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIA 629
F EV ++R ++ M S + L+ VM+++ GG L ++ + EE +A +A
Sbjct: 65 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA 124
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGR 689
L A+ +H G IHRDIK D+IL+ DG +KL+DFG C
Sbjct: 125 VLQ-ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA------------------- 164
Query: 690 QDSME-PSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLR 748
Q S E P + GTP ++APE++ R
Sbjct: 165 QVSKEVPRRKXLVGTP----------------------------------YWMAPELISR 190
Query: 749 TGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADL 808
Y D WS+G+++ EM+ G PP+ N K+I + ++SP
Sbjct: 191 LPYGPEVDIWSLGIMVIEMVDGEPPYF-NEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGF 249
Query: 809 ILQLCTGADKRLGKNASEVKAHPFFS 834
+ +L D A+E+ HPF +
Sbjct: 250 LDRLLV-RDPAQRATAAELLKHPFLA 274
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 103/252 (40%), Gaps = 61/252 (24%)
Query: 543 GVFGEVTL-VRKIDTNHLYV----MKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--- 594
G GEV L V ++ + V MK C + + K+ NH V+K H
Sbjct: 17 GAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKM-LNHENVVKFYGHRRE 75
Query: 595 -NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
N Y ++Y GG+L + EP A+ + +L V +H +G HRDIKP+N+
Sbjct: 76 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 135
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L+D ++K++DFGL T FR+ + +
Sbjct: 136 LLDERDNLKISDFGLATVFRYNNRER---------------------------------- 161
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY-TQLCDWWSVGVILYEMLVGSP 772
L + + GT Y+APE+L R + + D WS G++L ML G
Sbjct: 162 ----------------LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 205
Query: 773 PFLANTSAETQY 784
P+ + + +Y
Sbjct: 206 PWDQPSDSCQEY 217
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 110/266 (41%), Gaps = 59/266 (22%)
Query: 572 FGEVTLVRKIDTNHLYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIA 629
F EV ++R ++ M S + L+ VM+++ GG L ++ + EE +A +A
Sbjct: 119 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA 178
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGR 689
L A+ +H G IHRDIK D+IL+ DG +KL+DFG C
Sbjct: 179 VLQ-ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA------------------- 218
Query: 690 QDSME-PSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLR 748
Q S E P + GTP ++APE++ R
Sbjct: 219 QVSKEVPRRKXLVGTP----------------------------------YWMAPELISR 244
Query: 749 TGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADL 808
Y D WS+G+++ EM+ G PP+ N K+I + ++SP
Sbjct: 245 LPYGPEVDIWSLGIMVIEMVDGEPPYF-NEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGF 303
Query: 809 ILQLCTGADKRLGKNASEVKAHPFFS 834
+ +L D A+E+ HPF +
Sbjct: 304 LDRLLV-RDPAQRATAAELLKHPFLA 328
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 77.8 bits (190), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 110/266 (41%), Gaps = 59/266 (22%)
Query: 572 FGEVTLVRKIDTNHLYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIA 629
F EV ++R ++ M S + L+ VM+++ GG L ++ + EE +A +A
Sbjct: 196 FNEVVIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAAVCLA 255
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGR 689
L A+ +H G IHRDIK D+IL+ DG +KL+DFG C
Sbjct: 256 VLQ-ALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCA------------------- 295
Query: 690 QDSME-PSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLR 748
Q S E P + GTP ++APE++ R
Sbjct: 296 QVSKEVPRRKXLVGTP----------------------------------YWMAPELISR 321
Query: 749 TGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADL 808
Y D WS+G+++ EM+ G PP+ N K+I + ++SP
Sbjct: 322 LPYGPEVDIWSLGIMVIEMVDGEPPYF-NEPPLKAMKMIRDNLPPRLKNLHKVSPSLKGF 380
Query: 809 ILQLCTGADKRLGKNASEVKAHPFFS 834
+ +L D A+E+ HPF +
Sbjct: 381 LDRLLV-RDPAQRATAAELLKHPFLA 405
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 79/302 (26%), Positives = 131/302 (43%), Gaps = 73/302 (24%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKC-VGAFG-EVTLVRKIDT----NHLYVMKGSPH-- 594
G FG V L R+ ++ + +K ++K + G E L R+I+ +H +++ +
Sbjct: 34 GKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFY 93
Query: 595 --NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
+Y +++Y P G+L L K F+E + EL A+ H IHRDIKP+N
Sbjct: 94 DRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYCHGKKVIHRDIKPEN 153
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
+L+ G +K+ DFG WS P +
Sbjct: 154 LLLGLKGELKIADFG-------------------------------WSVHAPSLRRK--- 179
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
++ GT +Y+ PE++ + + D W +GV+ YE+LVG+P
Sbjct: 180 --------------------TMCGTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNP 219
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGA-DLILQLCT-GADKRLGKNASEVKAH 830
PF + + ET +++ + L PA P GA DLI +L +RL ++V AH
Sbjct: 220 PFESASHNETYRRIVKVD--LKFPASV---PTGAQDLISKLLRHNPSERLP--LAQVSAH 272
Query: 831 PF 832
P+
Sbjct: 273 PW 274
Score = 33.5 bits (75), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 16/64 (25%), Positives = 35/64 (54%)
Query: 84 TNHLYAMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIP 143
++ + A+K L K+ + K ++ E +I A + +++LY F D+ +Y +++Y P
Sbjct: 47 SHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHLHHPNILRLYNYFYDRRRIYLILEYAP 106
Query: 144 GEKL 147
+L
Sbjct: 107 RGEL 110
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 77.4 bits (189), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 108/265 (40%), Gaps = 67/265 (25%)
Query: 534 VMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCV-------GAFGEVTLVRKIDTNHL 586
++KTI K G F +V L R I T +K I K F EV +++ + NH
Sbjct: 16 LLKTIGK--GNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL--NHP 71
Query: 587 YVMKG----SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMG 642
++K LY +M+Y GG++ L+ G +E AR ++ AV+ H+
Sbjct: 72 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 131
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+K +N+L+D D +IK+ DFG F G+ D+
Sbjct: 132 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG------------GKLDTF--------- 170
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
C + P A L Y PEV D WS+GV
Sbjct: 171 -------CGSPPYA--------------APELFQGKKYDGPEV----------DVWSLGV 199
Query: 763 ILYEMLVGSPPFLANTSAETQYKVI 787
ILY ++ GS PF E + +V+
Sbjct: 200 ILYTLVSGSLPFDGQNLKELRERVL 224
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 77.4 bits (189), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 103/252 (40%), Gaps = 61/252 (24%)
Query: 543 GVFGEVTL-VRKIDTNHLYV----MKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--- 594
G +GEV L V ++ + V MK C + + + NH V+K H
Sbjct: 18 GAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAM-LNHENVVKFYGHRRE 76
Query: 595 -NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
N Y ++Y GG+L + EP A+ + +L V +H +G HRDIKP+N+
Sbjct: 77 GNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL 136
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L+D ++K++DFGL T FR+ + +
Sbjct: 137 LLDERDNLKISDFGLATVFRYNNRER---------------------------------- 162
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY-TQLCDWWSVGVILYEMLVGSP 772
L + + GT Y+APE+L R + + D WS G++L ML G
Sbjct: 163 ----------------LLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGEL 206
Query: 773 PFLANTSAETQY 784
P+ + + +Y
Sbjct: 207 PWDQPSDSCQEY 218
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 87/200 (43%), Gaps = 57/200 (28%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
+ Y V + + GG ++S + K+ F E A + ++ A++ +H G HRD+KP+NIL
Sbjct: 84 DRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENIL 143
Query: 655 IDRDGH---IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCI 711
+ +K+ DFGL +G + NGD C I
Sbjct: 144 CEHPNQVSPVKICDFGLGSGIKL---------NGD---------------------CSPI 173
Query: 712 NSP--LKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-----YTQLCDWWSVGVIL 764
++P L P G+ Y+APEV+ Y + CD WS+GVIL
Sbjct: 174 STPELLTP-----------------CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216
Query: 765 YEMLVGSPPFLANTSAETQY 784
Y +L G PPF+ ++ +
Sbjct: 217 YILLSGYPPFVGRCGSDCGW 236
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 102/252 (40%), Gaps = 73/252 (28%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTL----------VRKIDT-NHLYVMK 590
+G+ G+V + T + +K + C A EV L VR +D +LY +
Sbjct: 26 LGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGR 85
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKG--IFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
L VM+ + GG+L S + +G F E A + + A++ +H + HRD+
Sbjct: 86 KC----LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 141
Query: 649 KPDNILIDR---DGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPG 705
KP+N+L + +KLTDFG
Sbjct: 142 KPENLLYTSKRPNAILKLTDFGF------------------------------------A 165
Query: 706 QECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 765
+E NS +P TP Y+APEVL Y + CD WS+GVI+Y
Sbjct: 166 KETTSHNSLTEPCY-----------------TPYYVAPEVLGPEKYDKSCDMWSLGVIMY 208
Query: 766 EMLVGSPPFLAN 777
+L G PPF +N
Sbjct: 209 ILLCGYPPFYSN 220
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 93/218 (42%), Gaps = 57/218 (26%)
Query: 572 FGEVTLVRKIDTNHLYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIA 629
F EV ++R +++ M S + L+ VM+++ GG L ++ + EE +A ++
Sbjct: 90 FNEVVIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVCLS 149
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGR 689
L A+ +H G IHRDIK D+IL+ DG IKL+DFG C
Sbjct: 150 VLR-ALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCA------------------- 189
Query: 690 QDSME-PSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLR 748
Q S E P + GTP ++APEV+ R
Sbjct: 190 QVSKEVPKRKXLVGTP----------------------------------YWMAPEVISR 215
Query: 749 TGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKV 786
Y D WS+G+++ EM+ G PP+ + ++
Sbjct: 216 LPYGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI 253
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 77.0 bits (188), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 139/349 (39%), Gaps = 94/349 (26%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH------- 594
+GV G+V T +K +Y A EV +H + G PH
Sbjct: 20 LGVNGKVLECFHRRTGQKCALKLLYDSPKARQEV--------DHHWQASGGPHIVCILDV 71
Query: 595 --------NNLYFVMDYIPGGDLMSLLIKKG--IFEEPLARFYIAELTCAVESVHKMGFI 644
L +M+ + GG+L S + ++G F E A + ++ A++ +H
Sbjct: 72 YENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIA 131
Query: 645 HRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ 701
HRD+KP+N+L ++D +KLTDF GF ++E +Q
Sbjct: 132 HRDVKPENLLYTSKEKDAVLKLTDF----GF-----------------------AKETTQ 164
Query: 702 GTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 761
C TP Y+APEVL Y + CD WS+G
Sbjct: 165 NALQTPCY---------------------------TPYYVAPEVLGPEKYDKSCDMWSLG 197
Query: 762 VILYEMLVGSPPFLANT----SAETQYKVINWESCLHIPAEAQLSPEGADLI-LQLCTGA 816
VI+Y +L G PPF +NT S + ++ + P +++S + LI L L T
Sbjct: 198 VIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDP 257
Query: 817 DKRLGKNASEVKAHPFFSNVDFEKGVRTLTPPHIPRIQNSMDTSNFDPV 865
+RL ++ HP+ + + V TP H R+ D ++D V
Sbjct: 258 TERL--TITQFMNHPWIN----QSMVVPQTPLHTARVLQE-DKDHWDEV 299
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 107/265 (40%), Gaps = 67/265 (25%)
Query: 534 VMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCV-------GAFGEVTLVRKIDTNHL 586
++KTI K G F +V L R I T +K I K F EV +++ + NH
Sbjct: 18 LLKTIGK--GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL--NHP 73
Query: 587 YVMKG----SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMG 642
++K LY VM+Y GG++ L+ G +E AR ++ AV+ H+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+K +N+L+D D +IK+ DFG F + + +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF--------------------- 172
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
C + P A L Y PEV D WS+GV
Sbjct: 173 -------CGSPPYA--------------APELFQGKKYDGPEV----------DVWSLGV 201
Query: 763 ILYEMLVGSPPFLANTSAETQYKVI 787
ILY ++ GS PF E + +V+
Sbjct: 202 ILYTLVSGSLPFDGQNLKELRERVL 226
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 77.0 bits (188), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 107/265 (40%), Gaps = 67/265 (25%)
Query: 534 VMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCV-------GAFGEVTLVRKIDTNHL 586
++KTI K G F +V L R I T +K I K F EV +++ + NH
Sbjct: 18 LLKTIGK--GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL--NHP 73
Query: 587 YVMKG----SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMG 642
++K LY VM+Y GG++ L+ G +E AR ++ AV+ H+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+K +N+L+D D +IK+ DFG F + + +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF--------------------- 172
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
C + P A L Y PEV D WS+GV
Sbjct: 173 -------CGSPPYA--------------APELFQGKKYDGPEV----------DVWSLGV 201
Query: 763 ILYEMLVGSPPFLANTSAETQYKVI 787
ILY ++ GS PF E + +V+
Sbjct: 202 ILYTLVSGSLPFDGQNLKELRERVL 226
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 107/265 (40%), Gaps = 67/265 (25%)
Query: 534 VMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCV-------GAFGEVTLVRKIDTNHL 586
++KTI K G F +V L R I T +K I K F EV +++ + NH
Sbjct: 19 LLKTIGK--GNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL--NHP 74
Query: 587 YVMKG----SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMG 642
++K LY +M+Y GG++ L+ G +E AR ++ AV+ H+
Sbjct: 75 NIVKLFEVIETEKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCHQKR 134
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+K +N+L+D D +IK+ DFG F G+ D+
Sbjct: 135 IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG------------GKLDAF--------- 173
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
C P A L Y PEV D WS+GV
Sbjct: 174 -------CGAPPYA--------------APELFQGKKYDGPEV----------DVWSLGV 202
Query: 763 ILYEMLVGSPPFLANTSAETQYKVI 787
ILY ++ GS PF E + +V+
Sbjct: 203 ILYTLVSGSLPFDGQNLKELRERVL 227
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 76.6 bits (187), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 88/349 (25%), Positives = 139/349 (39%), Gaps = 94/349 (26%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH------- 594
+GV G+V T +K +Y A EV +H + G PH
Sbjct: 39 LGVNGKVLECFHRRTGQKCALKLLYDSPKARQEV--------DHHWQASGGPHIVCILDV 90
Query: 595 --------NNLYFVMDYIPGGDLMSLLIKKG--IFEEPLARFYIAELTCAVESVHKMGFI 644
L +M+ + GG+L S + ++G F E A + ++ A++ +H
Sbjct: 91 YENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIA 150
Query: 645 HRDIKPDNILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQ 701
HRD+KP+N+L ++D +KLTDF GF ++E +Q
Sbjct: 151 HRDVKPENLLYTSKEKDAVLKLTDF----GF-----------------------AKETTQ 183
Query: 702 GTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVG 761
C TP Y+APEVL Y + CD WS+G
Sbjct: 184 NALQTPCY---------------------------TPYYVAPEVLGPEKYDKSCDMWSLG 216
Query: 762 VILYEMLVGSPPFLANT----SAETQYKVINWESCLHIPAEAQLSPEGADLI-LQLCTGA 816
VI+Y +L G PPF +NT S + ++ + P +++S + LI L L T
Sbjct: 217 VIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSEVSEDAKQLIRLLLKTDP 276
Query: 817 DKRLGKNASEVKAHPFFSNVDFEKGVRTLTPPHIPRIQNSMDTSNFDPV 865
+RL ++ HP+ + + V TP H R+ D ++D V
Sbjct: 277 TERL--TITQFMNHPWIN----QSMVVPQTPLHTARVLQE-DKDHWDEV 318
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 76.6 bits (187), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/265 (27%), Positives = 109/265 (41%), Gaps = 67/265 (25%)
Query: 534 VMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCV-------GAFGEVTLVRKIDTNHL 586
++KTI K G F +V L R I T ++ I K F EV +++ + NH
Sbjct: 18 LLKTIGK--GNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVL--NHP 73
Query: 587 YVMKG----SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMG 642
++K LY VM+Y GG++ L+ G +E AR ++ AV+ H+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+K +N+L+D D +IK+ DFG S E++ G
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGF---------------------------SNEFTFG 166
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
E C + P A L Y PEV D WS+GV
Sbjct: 167 NKLDEF-CGSPPYA--------------APELFQGKKYDGPEV----------DVWSLGV 201
Query: 763 ILYEMLVGSPPFLANTSAETQYKVI 787
ILY ++ GS PF E + +V+
Sbjct: 202 ILYTLVSGSLPFDGQNLKELRERVL 226
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 82/195 (42%), Gaps = 57/195 (29%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL-I 655
+Y V + GG+L+ ++++ F E A + +T VE +H G +HRD+KP NIL +
Sbjct: 91 VYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYV 150
Query: 656 DRDGH---IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
D G+ I++ DFG R +E TP C N
Sbjct: 151 DESGNPESIRICDFGFAKQLR----------------------AENGLLXTP---CYTAN 185
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
++APEVL R GY CD WS+GV+LY L G
Sbjct: 186 ---------------------------FVAPEVLERQGYDAACDIWSLGVLLYTXLTGYT 218
Query: 773 PFLANTSAETQYKVI 787
PF AN +T +++
Sbjct: 219 PF-ANGPDDTPEEIL 232
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 76.3 bits (186), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 107/265 (40%), Gaps = 67/265 (25%)
Query: 534 VMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCV-------GAFGEVTLVRKIDTNHL 586
++KTI K G F +V L R I T +K I K F EV +++ + NH
Sbjct: 11 LLKTIGK--GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL--NHP 66
Query: 587 YVMKG----SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMG 642
++K LY VM+Y GG++ L+ G +E AR ++ AV+ H+
Sbjct: 67 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQYCHQKF 126
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+K +N+L+D D +IK+ DFG F + + +
Sbjct: 127 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF--------------------- 165
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
C + P A L Y PEV D WS+GV
Sbjct: 166 -------CGSPPYA--------------APELFQGKKYDGPEV----------DVWSLGV 194
Query: 763 ILYEMLVGSPPFLANTSAETQYKVI 787
ILY ++ GS PF E + +V+
Sbjct: 195 ILYTLVSGSLPFDGQNLKELRERVL 219
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 71/265 (26%), Positives = 106/265 (40%), Gaps = 67/265 (25%)
Query: 534 VMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCV-------GAFGEVTLVRKIDTNHL 586
++KTI K G F +V L R I T +K I K F EV +++ + NH
Sbjct: 18 LLKTIGK--GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVL--NHP 73
Query: 587 YVMKG----SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMG 642
++K LY VM+Y GG++ L+ G +E AR ++ AV+ H+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+K +N+L+D D +IK+ DFG F + + +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDAF--------------------- 172
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
C P A L Y PEV D WS+GV
Sbjct: 173 -------CGAPPYA--------------APELFQGKKYDGPEV----------DVWSLGV 201
Query: 763 ILYEMLVGSPPFLANTSAETQYKVI 787
ILY ++ GS PF E + +V+
Sbjct: 202 ILYTLVSGSLPFDGQNLKELRERVL 226
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 76.3 bits (186), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 107/265 (40%), Gaps = 67/265 (25%)
Query: 534 VMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCV-------GAFGEVTLVRKIDTNHL 586
++KTI K G F +V L R I T ++ I K F EV +++ + NH
Sbjct: 18 LLKTIGK--GNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVL--NHP 73
Query: 587 YVMKG----SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMG 642
++K LY VM+Y GG++ L+ G +E AR ++ AV+ H+
Sbjct: 74 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKF 133
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+K +N+L+D D +IK+ DFG F + + +
Sbjct: 134 IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTF--------------------- 172
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
C + P A L Y PEV D WS+GV
Sbjct: 173 -------CGSPPYA--------------APELFQGKKYDGPEV----------DVWSLGV 201
Query: 763 ILYEMLVGSPPFLANTSAETQYKVI 787
ILY ++ GS PF E + +V+
Sbjct: 202 ILYTLVSGSLPFDGQNLKELRERVL 226
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 110/271 (40%), Gaps = 62/271 (22%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN--NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
EV+++R++ +++ + N ++ +++ + GG+L L +K E A +I ++
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 632 TCAVESVHKMGFIHRDIKPDNI-LIDRD---GHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
V +H H D+KP+NI L+D++ HIKL DFGL H
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----------------H 167
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
+D +E ++ GTP ++APE++
Sbjct: 168 EIEDGVE------------------------------------FKNIFGTPEFVAPEIVN 191
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGAD 807
D WS+GVI Y +L G+ PFL +T ET + +Q S D
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKD 251
Query: 808 LILQLCTG-ADKRLGKNASEVKAHPFFSNVD 837
I +L KRL E HP+ + VD
Sbjct: 252 FIRKLLVKETRKRL--TIQEALRHPWITPVD 280
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/271 (24%), Positives = 110/271 (40%), Gaps = 62/271 (22%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN--NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
EV+++R++ +++ + N ++ +++ + GG+L L +K E A +I ++
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 632 TCAVESVHKMGFIHRDIKPDNI-LIDRD---GHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
V +H H D+KP+NI L+D++ HIKL DFGL H
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----------------H 167
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
+D +E ++ GTP ++APE++
Sbjct: 168 EIEDGVE------------------------------------FKNIFGTPEFVAPEIVN 191
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGAD 807
D WS+GVI Y +L G+ PFL +T ET + +Q S D
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKD 251
Query: 808 LILQLCTG-ADKRLGKNASEVKAHPFFSNVD 837
I +L KRL E HP+ + VD
Sbjct: 252 FIRKLLVKETRKRL--TIQEALRHPWITPVD 280
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 102/252 (40%), Gaps = 73/252 (28%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTL----------VRKIDT-NHLYVMK 590
+G+ G+V + T + +K + C A EV L VR +D +LY +
Sbjct: 78 LGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGR 137
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKG--IFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
L VM+ + GG+L S + +G F E A + + A++ +H + HRD+
Sbjct: 138 KC----LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 193
Query: 649 KPDNILIDR---DGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPG 705
KP+N+L + +KLTDF GF
Sbjct: 194 KPENLLYTSKRPNAILKLTDF----GF--------------------------------A 217
Query: 706 QECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 765
+E NS P TP Y+APEVL Y + CD WS+GVI+Y
Sbjct: 218 KETTSHNSLTTPCY-----------------TPYYVAPEVLGPEKYDKSCDMWSLGVIMY 260
Query: 766 EMLVGSPPFLAN 777
+L G PPF +N
Sbjct: 261 ILLCGYPPFYSN 272
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 102/252 (40%), Gaps = 73/252 (28%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTL----------VRKIDT-NHLYVMK 590
+G+ G+V + T + +K + C A EV L VR +D +LY +
Sbjct: 72 LGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGR 131
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKG--IFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
L VM+ + GG+L S + +G F E A + + A++ +H + HRD+
Sbjct: 132 KC----LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 187
Query: 649 KPDNILIDR---DGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPG 705
KP+N+L + +KLTDF GF
Sbjct: 188 KPENLLYTSKRPNAILKLTDF----GF--------------------------------A 211
Query: 706 QECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 765
+E NS P TP Y+APEVL Y + CD WS+GVI+Y
Sbjct: 212 KETTSHNSLTTPCY-----------------TPYYVAPEVLGPEKYDKSCDMWSLGVIMY 254
Query: 766 EMLVGSPPFLAN 777
+L G PPF +N
Sbjct: 255 ILLCGYPPFYSN 266
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 112/276 (40%), Gaps = 62/276 (22%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN--NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
EV+++R++ ++ + N ++ +++ + GG+L L +K E A +I ++
Sbjct: 65 EVSILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 632 TCAVESVHKMGFIHRDIKPDNI-LIDRD---GHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
V +H H D+KP+NI L+D++ HIKL DFGL H
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----------------H 167
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
+D +E ++ GTP ++APE++
Sbjct: 168 EIEDGVE------------------------------------FKNIFGTPEFVAPEIVN 191
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGAD 807
D WS+GVI Y +L G+ PFL +T ET + +Q S D
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKD 251
Query: 808 LILQLCTG-ADKRLGKNASEVKAHPFFSNVDFEKGV 842
I +L KRL E HP+ + VD ++ +
Sbjct: 252 FIRKLLVKETRKRL--TIQEALRHPWITPVDTQQAM 285
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 102/252 (40%), Gaps = 73/252 (28%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTL----------VRKIDT-NHLYVMK 590
+G+ G+V + T + +K + C A EV L VR +D +LY +
Sbjct: 28 LGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGR 87
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKG--IFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
L VM+ + GG+L S + +G F E A + + A++ +H + HRD+
Sbjct: 88 KC----LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 143
Query: 649 KPDNILIDR---DGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPG 705
KP+N+L + +KLTDF GF
Sbjct: 144 KPENLLYTSKRPNAILKLTDF----GF--------------------------------A 167
Query: 706 QECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 765
+E NS P TP Y+APEVL Y + CD WS+GVI+Y
Sbjct: 168 KETTSHNSLTTPCY-----------------TPYYVAPEVLGPEKYDKSCDMWSLGVIMY 210
Query: 766 EMLVGSPPFLAN 777
+L G PPF +N
Sbjct: 211 ILLCGYPPFYSN 222
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 102/252 (40%), Gaps = 73/252 (28%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTL----------VRKIDT-NHLYVMK 590
+G+ G+V + T + +K + C A EV L VR +D +LY +
Sbjct: 33 LGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGR 92
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKG--IFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
L VM+ + GG+L S + +G F E A + + A++ +H + HRD+
Sbjct: 93 KC----LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 148
Query: 649 KPDNILIDR---DGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPG 705
KP+N+L + +KLTDF GF
Sbjct: 149 KPENLLYTSKRPNAILKLTDF----GF--------------------------------A 172
Query: 706 QECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 765
+E NS P TP Y+APEVL Y + CD WS+GVI+Y
Sbjct: 173 KETTSHNSLTTPCY-----------------TPYYVAPEVLGPEKYDKSCDMWSLGVIMY 215
Query: 766 EMLVGSPPFLAN 777
+L G PPF +N
Sbjct: 216 ILLCGYPPFYSN 227
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 102/252 (40%), Gaps = 73/252 (28%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTL----------VRKIDT-NHLYVMK 590
+G+ G+V + T + +K + C A EV L VR +D +LY +
Sbjct: 34 LGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGR 93
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKG--IFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
L VM+ + GG+L S + +G F E A + + A++ +H + HRD+
Sbjct: 94 KC----LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 149
Query: 649 KPDNILIDR---DGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPG 705
KP+N+L + +KLTDF GF
Sbjct: 150 KPENLLYTSKRPNAILKLTDF----GF--------------------------------A 173
Query: 706 QECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 765
+E NS P TP Y+APEVL Y + CD WS+GVI+Y
Sbjct: 174 KETTSHNSLTTPCY-----------------TPYYVAPEVLGPEKYDKSCDMWSLGVIMY 216
Query: 766 EMLVGSPPFLAN 777
+L G PPF +N
Sbjct: 217 ILLCGYPPFYSN 228
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 102/252 (40%), Gaps = 73/252 (28%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTL----------VRKIDT-NHLYVMK 590
+G+ G+V + T + +K + C A EV L VR +D +LY +
Sbjct: 26 LGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGR 85
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKG--IFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
L VM+ + GG+L S + +G F E A + + A++ +H + HRD+
Sbjct: 86 KC----LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 141
Query: 649 KPDNILIDR---DGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPG 705
KP+N+L + +KLTDF GF
Sbjct: 142 KPENLLYTSKRPNAILKLTDF----GF--------------------------------A 165
Query: 706 QECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 765
+E NS P TP Y+APEVL Y + CD WS+GVI+Y
Sbjct: 166 KETTSHNSLTTPCY-----------------TPYYVAPEVLGPEKYDKSCDMWSLGVIMY 208
Query: 766 EMLVGSPPFLAN 777
+L G PPF +N
Sbjct: 209 ILLCGYPPFYSN 220
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 102/252 (40%), Gaps = 73/252 (28%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTL----------VRKIDT-NHLYVMK 590
+G+ G+V + T + +K + C A EV L VR +D +LY +
Sbjct: 32 LGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGR 91
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKG--IFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
L VM+ + GG+L S + +G F E A + + A++ +H + HRD+
Sbjct: 92 KC----LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 147
Query: 649 KPDNILIDR---DGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPG 705
KP+N+L + +KLTDF GF
Sbjct: 148 KPENLLYTSKRPNAILKLTDF----GF--------------------------------A 171
Query: 706 QECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 765
+E NS P TP Y+APEVL Y + CD WS+GVI+Y
Sbjct: 172 KETTSHNSLTTPCY-----------------TPYYVAPEVLGPEKYDKSCDMWSLGVIMY 214
Query: 766 EMLVGSPPFLAN 777
+L G PPF +N
Sbjct: 215 ILLCGYPPFYSN 226
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 102/252 (40%), Gaps = 73/252 (28%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTL----------VRKIDT-NHLYVMK 590
+G+ G+V + T + +K + C A EV L VR +D +LY +
Sbjct: 28 LGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGR 87
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKG--IFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
L VM+ + GG+L S + +G F E A + + A++ +H + HRD+
Sbjct: 88 KC----LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 143
Query: 649 KPDNILIDR---DGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPG 705
KP+N+L + +KLTDF GF
Sbjct: 144 KPENLLYTSKRPNAILKLTDF----GF--------------------------------A 167
Query: 706 QECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 765
+E NS P TP Y+APEVL Y + CD WS+GVI+Y
Sbjct: 168 KETTSHNSLTTPCY-----------------TPYYVAPEVLGPEKYDKSCDMWSLGVIMY 210
Query: 766 EMLVGSPPFLAN 777
+L G PPF +N
Sbjct: 211 ILLCGYPPFYSN 222
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 102/252 (40%), Gaps = 73/252 (28%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTL----------VRKIDT-NHLYVMK 590
+G+ G+V + T + +K + C A EV L VR +D +LY +
Sbjct: 27 LGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGR 86
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKG--IFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
L VM+ + GG+L S + +G F E A + + A++ +H + HRD+
Sbjct: 87 KC----LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 142
Query: 649 KPDNILIDR---DGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPG 705
KP+N+L + +KLTDF GF
Sbjct: 143 KPENLLYTSKRPNAILKLTDF----GF--------------------------------A 166
Query: 706 QECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 765
+E NS P TP Y+APEVL Y + CD WS+GVI+Y
Sbjct: 167 KETTSHNSLTTPCY-----------------TPYYVAPEVLGPEKYDKSCDMWSLGVIMY 209
Query: 766 EMLVGSPPFLAN 777
+L G PPF +N
Sbjct: 210 ILLCGYPPFYSN 221
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 110/271 (40%), Gaps = 62/271 (22%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN--NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
EV+++R++ +++ + N ++ +++ + GG+L L +K E A +I ++
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 632 TCAVESVHKMGFIHRDIKPDNI-LIDRD---GHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
V +H H D+KP+NI L+D++ HIKL DFGL H
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----------------H 167
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
+D +E ++ GTP ++APE++
Sbjct: 168 EIEDGVE------------------------------------FKNIFGTPEFVAPEIVN 191
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGAD 807
D WS+GVI Y +L G+ PFL +T ET + + + S D
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKD 251
Query: 808 LILQLCTG-ADKRLGKNASEVKAHPFFSNVD 837
I +L KRL E HP+ + VD
Sbjct: 252 FIRKLLVKETRKRL--TIQEALRHPWITPVD 280
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 102/252 (40%), Gaps = 73/252 (28%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTL----------VRKIDT-NHLYVMK 590
+G+ G+V + T + +K + C A EV L VR +D +LY +
Sbjct: 42 LGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGR 101
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKG--IFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
L VM+ + GG+L S + +G F E A + + A++ +H + HRD+
Sbjct: 102 KC----LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 157
Query: 649 KPDNILIDR---DGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPG 705
KP+N+L + +KLTDF GF
Sbjct: 158 KPENLLYTSKRPNAILKLTDF----GF--------------------------------A 181
Query: 706 QECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 765
+E NS P TP Y+APEVL Y + CD WS+GVI+Y
Sbjct: 182 KETTSHNSLTTPCY-----------------TPYYVAPEVLGPEKYDKSCDMWSLGVIMY 224
Query: 766 EMLVGSPPFLAN 777
+L G PPF +N
Sbjct: 225 ILLCGYPPFYSN 236
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 98/241 (40%), Gaps = 62/241 (25%)
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILID- 656
Y V D + GG+L ++ + + E A I ++ +V +H+ +HRD+KP+N+L+
Sbjct: 106 YLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLAS 165
Query: 657 --RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEW--SQGTPGQECRCIN 712
+ +KL DFGL + G Q + W GTPG
Sbjct: 166 KCKGAAVKLADFGLAIEVQ--------------GEQQA------WFGFAGTPG------- 198
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
Y++PEVL + Y + D W+ GVILY +LVG P
Sbjct: 199 ---------------------------YLSPEVLRKDPYGKPVDIWACGVILYILLVGYP 231
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCT-GADKRLGKNASEVKAHP 831
PF + ++ P ++PE +LI Q+ T KR+ A + HP
Sbjct: 232 PFWDEDQHKLYQQIKAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRI--TADQALKHP 289
Query: 832 F 832
+
Sbjct: 290 W 290
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 108/265 (40%), Gaps = 67/265 (25%)
Query: 534 VMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCV-------GAFGEVTLVRKIDTNHL 586
+ KTI K G F +V L R + T +K I K F EV +++ + NH
Sbjct: 19 LQKTIGK--GNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKIL--NHP 74
Query: 587 YVMKG----SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMG 642
++K LY VM+Y GG++ L+ G +E AR ++ AV+ H+
Sbjct: 75 NIVKLFEVIETEKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQKY 134
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+K +N+L+D D +IK+ DFG S E++ G
Sbjct: 135 IVHRDLKAENLLLDGDMNIKIADFGF---------------------------SNEFTVG 167
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
+ C + P A L Y PEV D WS+GV
Sbjct: 168 NK-LDTFCGSPPYA--------------APELFQGKKYDGPEV----------DVWSLGV 202
Query: 763 ILYEMLVGSPPFLANTSAETQYKVI 787
ILY ++ GS PF E + +V+
Sbjct: 203 ILYTLVSGSLPFDGQNLKELRERVL 227
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 110/271 (40%), Gaps = 62/271 (22%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN--NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
EV+++R++ +++ + N ++ +++ + GG+L L +K E A +I ++
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 632 TCAVESVHKMGFIHRDIKPDNI-LIDRD---GHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
V +H H D+KP+NI L+D++ HIKL DFGL H
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----------------H 167
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
+D +E ++ GTP ++APE++
Sbjct: 168 EIEDGVE------------------------------------FKNIFGTPEFVAPEIVN 191
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGAD 807
D WS+GVI Y +L G+ PFL +T ET + + + S D
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKD 251
Query: 808 LILQLCTG-ADKRLGKNASEVKAHPFFSNVD 837
I +L KRL E HP+ + VD
Sbjct: 252 FIRKLLVKETRKRL--TIQEALRHPWITPVD 280
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 86/200 (43%), Gaps = 57/200 (28%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
+ Y V + + GG ++S + K+ F E A + ++ A++ +H G HRD+KP+NIL
Sbjct: 84 DRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENIL 143
Query: 655 IDRDGH---IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCI 711
+ +K+ DF L +G + NGD C I
Sbjct: 144 CEHPNQVSPVKICDFDLGSGIKL---------NGD---------------------CSPI 173
Query: 712 NSP--LKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-----YTQLCDWWSVGVIL 764
++P L P G+ Y+APEV+ Y + CD WS+GVIL
Sbjct: 174 STPELLTP-----------------CGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVIL 216
Query: 765 YEMLVGSPPFLANTSAETQY 784
Y +L G PPF+ ++ +
Sbjct: 217 YILLSGYPPFVGRCGSDCGW 236
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/271 (24%), Positives = 110/271 (40%), Gaps = 62/271 (22%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN--NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
EV+++R++ +++ + N ++ +++ + GG+L L +K E A +I ++
Sbjct: 65 EVSILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQI 124
Query: 632 TCAVESVHKMGFIHRDIKPDNI-LIDRD---GHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
V +H H D+KP+NI L+D++ HIKL DFGL H
Sbjct: 125 LDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLA-----------------H 167
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
+D +E ++ GTP ++APE++
Sbjct: 168 EIEDGVE------------------------------------FKNIFGTPEFVAPEIVN 191
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGAD 807
D WS+GVI Y +L G+ PFL +T ET + + + S D
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKD 251
Query: 808 LILQLCTG-ADKRLGKNASEVKAHPFFSNVD 837
I +L KRL E HP+ + VD
Sbjct: 252 FIRKLLVKETRKRL--TIQEALRHPWITPVD 280
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 73/152 (48%), Gaps = 14/152 (9%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLH 794
VGT Y+APEV+ YT DWW++G +LYEM+ G PF + +V
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK--E 403
Query: 795 IPAE--AQLSPEGADLILQ-LCTGADKRL---GKNASEVKAHPFFSNVDFEK-GVRTLTP 847
+P E + SP+ L Q LC +RL G +A EVK HP F ++F++ G L P
Sbjct: 404 VPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEP 463
Query: 848 PHIPRIQ-----NSMDTSNFDPVDPDKLRNSD 874
P P Q + +D F V +L +D
Sbjct: 464 PFKPDPQAIYCKDVLDIEQFSTVKGVELEPTD 495
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 12/138 (8%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVG--------AFGEVTLVRKIDTNHLYVMKGS-- 592
G FGEV + T +Y K + K A E ++ K+++ + + +
Sbjct: 195 GGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE 254
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKP 650
+ L V+ + GGDL + G F E A FY AE+ C +E +H+ ++RD+KP
Sbjct: 255 TKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKP 314
Query: 651 DNILIDRDGHIKLTDFGL 668
+NIL+D GHI+++D GL
Sbjct: 315 ENILLDDHGHIRISDLGL 332
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 73/152 (48%), Gaps = 14/152 (9%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLH 794
VGT Y+APEV+ YT DWW++G +LYEM+ G PF + +V
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEVERLVK--E 403
Query: 795 IPAE--AQLSPEGADLILQ-LCTGADKRL---GKNASEVKAHPFFSNVDFEK-GVRTLTP 847
+P E + SP+ L Q LC +RL G +A EVK HP F ++F++ G L P
Sbjct: 404 VPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKKLNFKRLGAGMLEP 463
Query: 848 PHIPRIQ-----NSMDTSNFDPVDPDKLRNSD 874
P P Q + +D F V +L +D
Sbjct: 464 PFKPDPQAIYCKDVLDIEQFSTVKGVELEPTD 495
Score = 66.6 bits (161), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 70/138 (50%), Gaps = 12/138 (8%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVG--------AFGEVTLVRKIDTNHLYVMKGS-- 592
G FGEV + T +Y K + K A E ++ K+++ + + +
Sbjct: 195 GGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAYE 254
Query: 593 PHNNLYFVMDYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKP 650
+ L V+ + GGDL + G F E A FY AE+ C +E +H+ ++RD+KP
Sbjct: 255 TKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHRERIVYRDLKP 314
Query: 651 DNILIDRDGHIKLTDFGL 668
+NIL+D GHI+++D GL
Sbjct: 315 ENILLDDHGHIRISDLGL 332
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 72/190 (37%), Gaps = 51/190 (26%)
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDR 657
Y VM+YI G L + G A + ++ ++ H M +HRDIKP NILID
Sbjct: 87 YLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQNILIDS 146
Query: 658 DGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKP 717
+ +K+ DFG+ T Q+N
Sbjct: 147 NKTLKIFDFGIAKALSET---SLTQTN--------------------------------- 170
Query: 718 LXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLAN 777
++GT Y +PE + D +S+G++LYEMLVG PPF
Sbjct: 171 ---------------HVLGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPPFNGE 215
Query: 778 TSAETQYKVI 787
T+ K I
Sbjct: 216 TAVSIAIKHI 225
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 73.6 bits (179), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 73/181 (40%), Gaps = 52/181 (28%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N ++ V++Y PGG+L +I + E R ++ AV VH G+ HRD+KP+N+L
Sbjct: 81 NKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENLL 140
Query: 655 IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSP 714
D +KL DFGLC + N D+ Q
Sbjct: 141 FDEYHKLKLIDFGLCAKPK---------GNKDYHLQ------------------------ 167
Query: 715 LKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYT-QLCDWWSVGVILYEMLVGSPP 773
+ G+ Y APE++ Y D WS+G++LY ++ G P
Sbjct: 168 ------------------TCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLP 209
Query: 774 F 774
F
Sbjct: 210 F 210
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 73.2 bits (178), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/265 (26%), Positives = 104/265 (39%), Gaps = 67/265 (25%)
Query: 534 VMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCV-------GAFGEVTLVRKIDTNHL 586
++KTI K G F +V L R I T +K I K F EV + + + NH
Sbjct: 18 LLKTIGK--GNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVL--NHP 73
Query: 587 YVMKG----SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMG 642
++K LY V +Y GG++ L+ G +E AR ++ AV+ H+
Sbjct: 74 NIVKLFEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAKFRQIVSAVQYCHQKF 133
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+K +N+L+D D +IK+ DFG F + + +
Sbjct: 134 IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNKLDAF--------------------- 172
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
C P A L Y PEV D WS+GV
Sbjct: 173 -------CGAPPYA--------------APELFQGKKYDGPEV----------DVWSLGV 201
Query: 763 ILYEMLVGSPPFLANTSAETQYKVI 787
ILY ++ GS PF E + +V+
Sbjct: 202 ILYTLVSGSLPFDGQNLKELRERVL 226
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 72.8 bits (177), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 80/320 (25%), Positives = 131/320 (40%), Gaps = 71/320 (22%)
Query: 530 NHLY-VMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVG------AFGEVTLVRKID 582
N Y V KT G FG+V + T L + I K G E++++ ++D
Sbjct: 86 NSFYTVSKTEILGGGRFGQVHKCEETATG-LKLAAKIIKTRGMKDKEEVKNEISVMNQLD 144
Query: 583 TNHLYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGI-FEEPLARFYIAELTCAVESVH 639
+L + + N++ VM+Y+ GG+L +I + E ++ ++ + +H
Sbjct: 145 HANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMH 204
Query: 640 KMGFIHRDIKPDNIL-IDRDG-HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSE 697
+M +H D+KP+NIL ++RD IK+ DFGL ++ P E
Sbjct: 205 QMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYK---------------------PRE 243
Query: 698 EW--SQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLC 755
+ + GTP ++APEV+ +
Sbjct: 244 KLKVNFGTP----------------------------------EFLAPEVVNYDFVSFPT 269
Query: 756 DWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTG 815
D WSVGVI Y +L G PFL + AET ++ L +S E + I +L
Sbjct: 270 DMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDISEEAKEFISKLLI- 328
Query: 816 ADKRLGKNASEVKAHPFFSN 835
+K +ASE HP+ S+
Sbjct: 329 KEKSWRISASEALKHPWLSD 348
Score = 32.3 bits (72), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 28/42 (66%)
Query: 107 VKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGEKLI 148
VK E ++ + D+ +++LY +F+ K+++ VM+Y+ G +L
Sbjct: 133 VKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELF 174
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 99/252 (39%), Gaps = 73/252 (28%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTL----------VRKIDT-NHLYVMK 590
+G+ G+V + T + +K + C A EV L VR +D +LY +
Sbjct: 72 LGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGR 131
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKG--IFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
L V + + GG+L S + +G F E A + A++ +H + HRD+
Sbjct: 132 KC----LLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDV 187
Query: 649 KPDNILIDR---DGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPG 705
KP+N+L + +KLTDF GF
Sbjct: 188 KPENLLYTSKRPNAILKLTDF----GF--------------------------------A 211
Query: 706 QECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 765
+E NS P TP Y+APEVL Y + CD WS+GVI Y
Sbjct: 212 KETTSHNSLTTPCY-----------------TPYYVAPEVLGPEKYDKSCDXWSLGVIXY 254
Query: 766 EMLVGSPPFLAN 777
+L G PPF +N
Sbjct: 255 ILLCGYPPFYSN 266
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 81/211 (38%), Gaps = 52/211 (24%)
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDR 657
Y VM+Y+ G L ++ +G A IA+ A+ H+ G IHRD+KP NILI
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANILISA 151
Query: 658 DGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKP 717
+K+ DFG+ + NS +
Sbjct: 152 TNAVKVVDFGIARAIADSGNSVXQTA---------------------------------- 177
Query: 718 LXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLAN 777
+++GT Y++PE D +S+G +LYE+L G PPF +
Sbjct: 178 ---------------AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
Query: 778 TSAETQYKVINWESCLHIPAEAQLSPEGADL 808
+ Y+ + + IP A+ ADL
Sbjct: 223 SPVSVAYQHVREDP---IPPSARHEGLSADL 250
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 88/226 (38%), Gaps = 66/226 (29%)
Query: 565 IYKCVGAFGEVTLVRKIDT----NHLYVMKGSPH----NNLYFVMDYIPGGDLMSLLIK- 615
I+ + A +++ID NH V+K N L V++ GDL S +IK
Sbjct: 67 IFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASFIEDNELNIVLELADAGDL-SRMIKH 125
Query: 616 ----KGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTG 671
K + E Y +L A+E +H +HRDIKP N+ I G +KL D GL
Sbjct: 126 FKKQKRLIPERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGL--- 182
Query: 672 FRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLA 731
+++ S + A
Sbjct: 183 ------GRFFSS-------------------------------------------KTTAA 193
Query: 732 HSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLAN 777
HSLVGTP Y++PE + GY D WS+G +LYEM PF +
Sbjct: 194 HSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPFYGD 239
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 70.5 bits (171), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/202 (25%), Positives = 88/202 (43%), Gaps = 55/202 (27%)
Query: 574 EVTLVRKIDTNHLYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
E+T++ + D++++ GS + L+ +M+Y+ GG + LL + G F+E + E+
Sbjct: 71 EITVLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLL-RAGPFDEFQIATMLKEI 129
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
++ +H IHRDIK N+L+ G +KL DF
Sbjct: 130 LKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADF------------------------- 164
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
G GQ ++ +K ++ VGTP ++APEV+ ++ Y
Sbjct: 165 ----------GVAGQ---LTDTQIK--------------RNTFVGTPFWMAPEVIQQSAY 197
Query: 752 TQLCDWWSVGVILYEMLVGSPP 773
D WS+G+ E+ G PP
Sbjct: 198 DSKADIWSLGITAIELAKGEPP 219
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 69.7 bits (169), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 56/189 (29%)
Query: 595 NNLYFVMDYIPGGDLMSLLI--------KKGIFEEPLARFYIAELTCAVESVHKMGFIHR 646
+ L+ VM + GG ++ ++ K G+ +E + E+ +E +HK G IHR
Sbjct: 86 DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHR 145
Query: 647 DIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQ 706
D+K NIL+ DG +++ DFG+ S + + GD R
Sbjct: 146 DVKAGNILLGEDGSVQIADFGV---------SAFLATGGDITRNK--------------- 181
Query: 707 ECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILY 765
+ + VGTP ++APEV+ + GY D WS G+
Sbjct: 182 -----------------------VRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAI 218
Query: 766 EMLVGSPPF 774
E+ G+ P+
Sbjct: 219 ELATGAAPY 227
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 69.7 bits (169), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 81/211 (38%), Gaps = 52/211 (24%)
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDR 657
Y VM+Y+ G L ++ +G A IA+ A+ H+ G IHRD+KP NI+I
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 658 DGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKP 717
+K+ DFG+ + NS +
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTA---------------------------------- 177
Query: 718 LXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLAN 777
+++GT Y++PE D +S+G +LYE+L G PPF +
Sbjct: 178 ---------------AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
Query: 778 TSAETQYKVINWESCLHIPAEAQLSPEGADL 808
+ Y+ + + IP A+ ADL
Sbjct: 223 SPVSVAYQHVREDP---IPPSARHEGLSADL 250
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 56/189 (29%)
Query: 595 NNLYFVMDYIPGGDLMSLLI--------KKGIFEEPLARFYIAELTCAVESVHKMGFIHR 646
+ L+ VM + GG ++ ++ K G+ +E + E+ +E +HK G IHR
Sbjct: 81 DELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHR 140
Query: 647 DIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQ 706
D+K NIL+ DG +++ DFG+ S + + GD R
Sbjct: 141 DVKAGNILLGEDGSVQIADFGV---------SAFLATGGDITRNK--------------- 176
Query: 707 ECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILY 765
+ + VGTP ++APEV+ + GY D WS G+
Sbjct: 177 -----------------------VRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAI 213
Query: 766 EMLVGSPPF 774
E+ G+ P+
Sbjct: 214 ELATGAAPY 222
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 69.7 bits (169), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/259 (23%), Positives = 100/259 (38%), Gaps = 63/259 (24%)
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDR 657
Y VM+Y+ G L ++ +G A IA+ A+ H+ G IHRD+KP NI+I
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 658 DGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKP 717
+K+ DFG+ + NS +
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTA---------------------------------- 177
Query: 718 LXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLAN 777
+++GT Y++PE D +S+G +LYE+L G PPF +
Sbjct: 178 ---------------AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
Query: 778 TSAETQYKVINWESCLHIPAEAQLSPEGADL---ILQLCTGADKRLGKNASEVKAHPFFS 834
+ Y+ + + IP A+ ADL +L+ + + A+E++A
Sbjct: 223 SPVSVAYQHVREDP---IPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA----- 274
Query: 835 NVDFEKGVRTLTPPHIPRI 853
D + V PP P++
Sbjct: 275 --DLVR-VHNGEPPEAPKV 290
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 81/211 (38%), Gaps = 52/211 (24%)
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDR 657
Y VM+Y+ G L ++ +G A IA+ A+ H+ G IHRD+KP NI+I
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 658 DGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKP 717
+K+ DFG+ + NS +
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTA---------------------------------- 177
Query: 718 LXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLAN 777
+++GT Y++PE D +S+G +LYE+L G PPF +
Sbjct: 178 ---------------AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
Query: 778 TSAETQYKVINWESCLHIPAEAQLSPEGADL 808
+ Y+ + + IP A+ ADL
Sbjct: 223 SPVSVAYQHVREDP---IPPSARHEGLSADL 250
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/211 (24%), Positives = 81/211 (38%), Gaps = 52/211 (24%)
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDR 657
Y VM+Y+ G L ++ +G A IA+ A+ H+ G IHRD+KP NI+I
Sbjct: 92 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 151
Query: 658 DGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKP 717
+K+ DFG+ + NS +
Sbjct: 152 TNAVKVMDFGIARAIADSGNSVTQTA---------------------------------- 177
Query: 718 LXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLAN 777
+++GT Y++PE D +S+G +LYE+L G PPF +
Sbjct: 178 ---------------AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 222
Query: 778 TSAETQYKVINWESCLHIPAEAQLSPEGADL 808
+ Y+ + + IP A+ ADL
Sbjct: 223 SPDSVAYQHVREDP---IPPSARHEGLSADL 250
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 107/260 (41%), Gaps = 58/260 (22%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIY----KCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
GAFG+V R + Y +K I K + EV L+ + NH YV++
Sbjct: 17 GAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL--NHQYVVR-------- 66
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEE--PLARFYIA 629
+ L R+ + +K + L+ M+Y G L L+ + + ++ R +
Sbjct: 67 YYAAWLERRNFVKPMTAVK--KKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLF-R 123
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGR 689
++ A+ +H G IHRD+KP NI ID ++K+ DFGL H
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV--------------HRS 169
Query: 690 QDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT 749
D ++ SQ PG S +GT Y+A EVL T
Sbjct: 170 LDILKLD---SQNLPGSSDNLT---------------------SAIGTAMYVATEVLDGT 205
Query: 750 G-YTQLCDWWSVGVILYEML 768
G Y + D +S+G+I +EM+
Sbjct: 206 GHYNEKIDMYSLGIIFFEMI 225
Score = 30.0 bits (66), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 451 SMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIY----KCVGAFGEVTLVRKIDTNHLY 506
S F +I +G GAFG+V R + YA+K I K EV L+ + NH Y
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL--NHQY 63
Query: 507 VMK 509
V++
Sbjct: 64 VVR 66
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 95/225 (42%), Gaps = 61/225 (27%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN--NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
EV+++++I ++ + N ++ +++ + GG+L L +K E A ++ ++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 632 TCAVESVHKMGFIHRDIKPDNI-LIDRD---GHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
V +H + H D+KP+NI L+DR+ IK+ DFGL H +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDF------- 170
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
G E + I GTP ++APE++
Sbjct: 171 -----------------GNEFKNI-----------------------FGTPEFVAPEIVN 190
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKV--INWE 790
D WS+GVI Y +L G+ PFL +T ET V +N+E
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/267 (24%), Positives = 102/267 (38%), Gaps = 72/267 (26%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLY---- 598
GVF V R+ T Y K I K + R+ + ++K H N+
Sbjct: 22 GVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHE 81
Query: 599 ---------FVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIK 649
+++ + GG+L L +K E A ++ ++ V +H + H D+K
Sbjct: 82 VYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAHFDLK 141
Query: 650 PDNI-LIDRD---GHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPG 705
P+NI L+DR+ IK+ DFGL H + G
Sbjct: 142 PENIMLLDRNVPKPRIKIIDFGLA------HKIDF------------------------G 171
Query: 706 QECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILY 765
E + I GTP ++APE++ D WS+GVI Y
Sbjct: 172 NEFKNI-----------------------FGTPEFVAPEIVNYEPLGLEADMWSIGVITY 208
Query: 766 EMLVGSPPFLANTSAETQYKV--INWE 790
+L G+ PFL +T ET V +N+E
Sbjct: 209 ILLSGASPFLGDTKQETLANVSAVNYE 235
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 95/225 (42%), Gaps = 61/225 (27%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN--NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
EV+++++I ++ + N ++ +++ + GG+L L +K E A ++ ++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 632 TCAVESVHKMGFIHRDIKPDNI-LIDRD---GHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
V +H + H D+KP+NI L+DR+ IK+ DFGL H +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDF------- 170
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
G E + I GTP ++APE++
Sbjct: 171 -----------------GNEFKNI-----------------------FGTPEFVAPEIVN 190
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKV--INWE 790
D WS+GVI Y +L G+ PFL +T ET V +N+E
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 95/225 (42%), Gaps = 61/225 (27%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN--NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
EV+++++I ++ + N ++ +++ + GG+L L +K E A ++ ++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 632 TCAVESVHKMGFIHRDIKPDNI-LIDRD---GHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
V +H + H D+KP+NI L+DR+ IK+ DFGL H +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDF------- 170
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
G E + I GTP ++APE++
Sbjct: 171 -----------------GNEFKNI-----------------------FGTPEFVAPEIVN 190
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKV--INWE 790
D WS+GVI Y +L G+ PFL +T ET V +N+E
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 95/225 (42%), Gaps = 61/225 (27%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN--NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
EV+++++I ++ + N ++ +++ + GG+L L +K E A ++ ++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 632 TCAVESVHKMGFIHRDIKPDNI-LIDRD---GHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
V +H + H D+KP+NI L+DR+ IK+ DFGL H +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDF------- 170
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
G E + I GTP ++APE++
Sbjct: 171 -----------------GNEFKNI-----------------------FGTPEFVAPEIVN 190
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKV--INWE 790
D WS+GVI Y +L G+ PFL +T ET V +N+E
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 78/190 (41%), Gaps = 59/190 (31%)
Query: 592 SPHNNLYFVMDYIPGGDLMSLLIKKG----IFEEPLARFYIAELTCAVESVHKMGFIHRD 647
S LY V +++ G DL ++K+ ++ E +A Y+ ++ A+ H IHRD
Sbjct: 96 SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRD 155
Query: 648 IKPDNILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTP 704
+KP+N+L+ + +KL DFG+ G+ G
Sbjct: 156 VKPENVLLASKENSAPVKLGDFGVAIQL------------GESG---------------- 187
Query: 705 GQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 764
+A VGTP+++APEV+ R Y + D W GVIL
Sbjct: 188 ------------------------LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVIL 223
Query: 765 YEMLVGSPPF 774
+ +L G PF
Sbjct: 224 FILLSGCLPF 233
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 95/225 (42%), Gaps = 61/225 (27%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN--NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
EV+++++I ++ + N ++ +++ + GG+L L +K E A ++ ++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 632 TCAVESVHKMGFIHRDIKPDNI-LIDRD---GHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
V +H + H D+KP+NI L+DR+ IK+ DFGL H +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDF------- 170
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
G E + I GTP ++APE++
Sbjct: 171 -----------------GNEFKNI-----------------------FGTPEFVAPEIVN 190
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKV--INWE 790
D WS+GVI Y +L G+ PFL +T ET V +N+E
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 131/323 (40%), Gaps = 73/323 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG-------------EVTLVRKIDTNHLYVM 589
G GEV L + T +K I K A G E+ +++K+ NH ++
Sbjct: 21 GACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL--NHPCII 78
Query: 590 KGS---PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHR 646
K + Y V++ + GG+L ++ +E + Y ++ AV+ +H+ G IHR
Sbjct: 79 KIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHR 138
Query: 647 DIKPDNILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGT 703
D+KP+N+L+ + D IK+TDFG +SK G+ ++ GT
Sbjct: 139 DLKPENVLLSSQEEDCLIKITDFG---------HSKIL---GETSLMRTL-------CGT 179
Query: 704 PGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 763
P + L P VGT Y + D WS+GVI
Sbjct: 180 P--------TYLAPEVLVS------------VGTAGY-----------NRAVDCWSLGVI 208
Query: 764 LYEMLVGSPPFLANTSAETQYKVINWESCLHIP-AEAQLSPEGADLILQLCTGADKRLGK 822
L+ L G PPF + + + I IP A++S + DL+ +L D +
Sbjct: 209 LFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLV-VDPKARF 267
Query: 823 NASEVKAHPFFSNVDFEKGVRTL 845
E HP+ + D ++ + L
Sbjct: 268 TTEEALRHPWLQDEDMKRKFQDL 290
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 105/268 (39%), Gaps = 69/268 (25%)
Query: 574 EVTLVRKIDTNHLYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
E+T++ + D+ ++ GS L+ +M+Y+ GG + LL K G EE + E+
Sbjct: 67 EITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLL-KPGPLEETYIATILREI 125
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
++ +H IHRDIK N+L+ G +KL DF
Sbjct: 126 LKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADF------------------------- 160
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
G GQ ++ +K + VGTP ++APEV+ ++ Y
Sbjct: 161 ----------GVAGQ---LTDTQIK--------------RNXFVGTPFWMAPEVIKQSAY 193
Query: 752 TQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADL--- 808
D WS+G+ E+ G PP S +V+ IP + + EG
Sbjct: 194 DFKADIWSLGITAIELAKGEPP----NSDLHPMRVL-----FLIPKNSPPTLEGQHSKPF 244
Query: 809 --ILQLCTGADKRLGKNASEVKAHPFFS 834
++ C D R A E+ H F +
Sbjct: 245 KEFVEACLNKDPRFRPTAKELLKHKFIT 272
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 67.8 bits (164), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 95/225 (42%), Gaps = 61/225 (27%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN--NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
EV+++++I ++ + N ++ +++ + GG+L L +K E A ++ ++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 632 TCAVESVHKMGFIHRDIKPDNI-LIDRD---GHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
V +H + H D+KP+NI L+DR+ IK+ DFGL H +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLA------HKIDF------- 170
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
G E + I GTP ++APE++
Sbjct: 171 -----------------GNEFKNI-----------------------FGTPEFVAPEIVN 190
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKV--INWE 790
D WS+GVI Y +L G+ PFL +T ET V +N+E
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 131/323 (40%), Gaps = 73/323 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG-------------EVTLVRKIDTNHLYVM 589
G GEV L + T +K I K A G E+ +++K+ NH ++
Sbjct: 21 GACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL--NHPCII 78
Query: 590 KGS---PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHR 646
K + Y V++ + GG+L ++ +E + Y ++ AV+ +H+ G IHR
Sbjct: 79 KIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHR 138
Query: 647 DIKPDNILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGT 703
D+KP+N+L+ + D IK+TDFG +SK G+ ++ GT
Sbjct: 139 DLKPENVLLSSQEEDCLIKITDFG---------HSKIL---GETSLMRTL-------CGT 179
Query: 704 PGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 763
P + L P VGT Y + D WS+GVI
Sbjct: 180 P--------TYLAPEVLVS------------VGTAGY-----------NRAVDCWSLGVI 208
Query: 764 LYEMLVGSPPFLANTSAETQYKVINWESCLHIP-AEAQLSPEGADLILQLCTGADKRLGK 822
L+ L G PPF + + + I IP A++S + DL+ +L D +
Sbjct: 209 LFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLV-VDPKARF 267
Query: 823 NASEVKAHPFFSNVDFEKGVRTL 845
E HP+ + D ++ + L
Sbjct: 268 TTEEALRHPWLQDEDMKRKFQDL 290
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 95/225 (42%), Gaps = 61/225 (27%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN--NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
EV+++++I ++ + N ++ +++ + GG+L L +K E A ++ ++
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 632 TCAVESVHKMGFIHRDIKPDNI-LIDRD---GHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
V +H + H D+KP+NI L+DR+ IK+ DFGL H +
Sbjct: 123 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL------AHKIDF------- 169
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
G E + I GTP ++APE++
Sbjct: 170 -----------------GNEFKNI-----------------------FGTPEFVAPEIVN 189
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKV--INWE 790
D WS+GVI Y +L G+ PFL +T ET V +N+E
Sbjct: 190 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 234
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 131/323 (40%), Gaps = 73/323 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG-------------EVTLVRKIDTNHLYVM 589
G GEV L + T +K I K A G E+ +++K+ NH ++
Sbjct: 20 GACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL--NHPCII 77
Query: 590 KGS---PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHR 646
K + Y V++ + GG+L ++ +E + Y ++ AV+ +H+ G IHR
Sbjct: 78 KIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHR 137
Query: 647 DIKPDNILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGT 703
D+KP+N+L+ + D IK+TDFG +SK G+ ++ GT
Sbjct: 138 DLKPENVLLSSQEEDCLIKITDFG---------HSKIL---GETSLMRTL-------CGT 178
Query: 704 PGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 763
P + L P VGT Y + D WS+GVI
Sbjct: 179 P--------TYLAPEVLVS------------VGTAGY-----------NRAVDCWSLGVI 207
Query: 764 LYEMLVGSPPFLANTSAETQYKVINWESCLHIP-AEAQLSPEGADLILQLCTGADKRLGK 822
L+ L G PPF + + + I IP A++S + DL+ +L D +
Sbjct: 208 LFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLV-VDPKARF 266
Query: 823 NASEVKAHPFFSNVDFEKGVRTL 845
E HP+ + D ++ + L
Sbjct: 267 TTEEALRHPWLQDEDMKRKFQDL 289
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/225 (24%), Positives = 95/225 (42%), Gaps = 61/225 (27%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN--NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
EV+++++I ++ + N ++ +++ + GG+L L +K E A ++ ++
Sbjct: 63 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 122
Query: 632 TCAVESVHKMGFIHRDIKPDNI-LIDRD---GHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
V +H + H D+KP+NI L+DR+ IK+ DFGL H +
Sbjct: 123 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGL------AHKIDF------- 169
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
G E + I GTP ++APE++
Sbjct: 170 -----------------GNEFKNI-----------------------FGTPEFVAPEIVN 189
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKV--INWE 790
D WS+GVI Y +L G+ PFL +T ET V +N+E
Sbjct: 190 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 234
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 131/323 (40%), Gaps = 73/323 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG-------------EVTLVRKIDTNHLYVM 589
G GEV L + T +K I K A G E+ +++K+ NH ++
Sbjct: 21 GACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL--NHPCII 78
Query: 590 KGS---PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHR 646
K + Y V++ + GG+L ++ +E + Y ++ AV+ +H+ G IHR
Sbjct: 79 KIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHR 138
Query: 647 DIKPDNILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGT 703
D+KP+N+L+ + D IK+TDFG +SK G+ ++ GT
Sbjct: 139 DLKPENVLLSSQEEDCLIKITDFG---------HSKIL---GETSLMRTL-------CGT 179
Query: 704 PGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 763
P + L P VGT Y + D WS+GVI
Sbjct: 180 P--------TYLAPEVLVS------------VGTAGY-----------NRAVDCWSLGVI 208
Query: 764 LYEMLVGSPPFLANTSAETQYKVINWESCLHIP-AEAQLSPEGADLILQLCTGADKRLGK 822
L+ L G PPF + + + I IP A++S + DL+ +L D +
Sbjct: 209 LFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLV-VDPKARF 267
Query: 823 NASEVKAHPFFSNVDFEKGVRTL 845
E HP+ + D ++ + L
Sbjct: 268 TTEEALRHPWLQDEDMKRKFQDL 290
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 67.0 bits (162), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 80/323 (24%), Positives = 131/323 (40%), Gaps = 73/323 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG-------------EVTLVRKIDTNHLYVM 589
G GEV L + T +K I K A G E+ +++K+ NH ++
Sbjct: 27 GACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKL--NHPCII 84
Query: 590 KGS---PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHR 646
K + Y V++ + GG+L ++ +E + Y ++ AV+ +H+ G IHR
Sbjct: 85 KIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHR 144
Query: 647 DIKPDNILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGT 703
D+KP+N+L+ + D IK+TDFG +SK G+ ++ GT
Sbjct: 145 DLKPENVLLSSQEEDCLIKITDFG---------HSKIL---GETSLMRTL-------CGT 185
Query: 704 PGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 763
P + L P VGT Y + D WS+GVI
Sbjct: 186 P--------TYLAPEVLVS------------VGTAGY-----------NRAVDCWSLGVI 214
Query: 764 LYEMLVGSPPFLANTSAETQYKVINWESCLHIP-AEAQLSPEGADLILQLCTGADKRLGK 822
L+ L G PPF + + + I IP A++S + DL+ +L D +
Sbjct: 215 LFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLV-VDPKARF 273
Query: 823 NASEVKAHPFFSNVDFEKGVRTL 845
E HP+ + D ++ + L
Sbjct: 274 TTEEALRHPWLQDEDMKRKFQDL 296
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 65.9 bits (159), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 55/202 (27%)
Query: 574 EVTLVRKIDTNHLYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
E+T++ + D+ ++ GS L+ +M+Y+ GG + LL + G +E + E+
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREI 113
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
++ +H IHRDIK N+L+ G +KL DF
Sbjct: 114 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADF------------------------- 148
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
G GQ ++ +K ++ VGTP ++APEV+ ++ Y
Sbjct: 149 ----------GVAGQ---LTDTQIK--------------RNTFVGTPFWMAPEVIKQSAY 181
Query: 752 TQLCDWWSVGVILYEMLVGSPP 773
D WS+G+ E+ G PP
Sbjct: 182 DSKADIWSLGITAIELARGEPP 203
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 65.9 bits (159), Expect = 1e-10, Method: Composition-based stats.
Identities = 55/235 (23%), Positives = 95/235 (40%), Gaps = 55/235 (23%)
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDR 657
Y VM+Y+ G L ++ +G A IA+ A+ H+ G IHRD+KP NI+I
Sbjct: 109 YIVMEYVDGVTLRDIVHTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISA 168
Query: 658 DGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKP 717
+K+ DFG+ ++ +G+ Q +
Sbjct: 169 TNAVKVMDFGI---------ARAIADSGNSVTQTA------------------------- 194
Query: 718 LXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLAN 777
+++GT Y++PE D +S+G +LYE+L G PPF +
Sbjct: 195 ---------------AVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPPFTGD 239
Query: 778 TSAETQYKVINWESCLHIPAEAQLSPEGADL---ILQLCTGADKRLGKNASEVKA 829
+ Y+ + + IP A+ ADL +L+ + + A+E++A
Sbjct: 240 SPVSVAYQHVREDP---IPPSARHEGLSADLDAVVLKALAKNPENRYQTAAEMRA 291
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 65.9 bits (159), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 106/260 (40%), Gaps = 58/260 (22%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIY----KCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
GAFG+V R + Y +K I K + EV L+ + NH YV++
Sbjct: 17 GAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL--NHQYVVR-------- 66
Query: 572 FGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEE--PLARFYIA 629
+ L R+ + +K + L+ M+Y L L+ + + ++ R +
Sbjct: 67 YYAAWLERRNFVKPMTAVKKK--STLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLF-R 123
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGR 689
++ A+ +H G IHRD+KP NI ID ++K+ DFGL H
Sbjct: 124 QILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNV--------------HRS 169
Query: 690 QDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT 749
D ++ SQ PG S +GT Y+A EVL T
Sbjct: 170 LDILKLD---SQNLPGSSDNLT---------------------SAIGTAMYVATEVLDGT 205
Query: 750 G-YTQLCDWWSVGVILYEML 768
G Y + D +S+G+I +EM+
Sbjct: 206 GHYNEKIDMYSLGIIFFEMI 225
Score = 30.4 bits (67), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 451 SMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIY----KCVGAFGEVTLVRKIDTNHLY 506
S F +I +G GAFG+V R + YA+K I K EV L+ + NH Y
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASL--NHQY 63
Query: 507 VMK 509
V++
Sbjct: 64 VVR 66
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 79/323 (24%), Positives = 131/323 (40%), Gaps = 73/323 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG-------------EVTLVRKIDTNHLYVM 589
G GEV L + T ++ I K A G E+ +++K+ NH ++
Sbjct: 160 GACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL--NHPCII 217
Query: 590 KGSPH---NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHR 646
K + Y V++ + GG+L ++ +E + Y ++ AV+ +H+ G IHR
Sbjct: 218 KIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHR 277
Query: 647 DIKPDNILI---DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGT 703
D+KP+N+L+ + D IK+TDFG +SK G+ ++ GT
Sbjct: 278 DLKPENVLLSSQEEDCLIKITDFG---------HSKIL---GETSLMRTL-------CGT 318
Query: 704 PGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 763
P + L P VGT Y + D WS+GVI
Sbjct: 319 P--------TYLAPEVLVS------------VGTAGY-----------NRAVDCWSLGVI 347
Query: 764 LYEMLVGSPPFLANTSAETQYKVINWESCLHIP-AEAQLSPEGADLILQLCTGADKRLGK 822
L+ L G PPF + + + I IP A++S + DL+ +L D +
Sbjct: 348 LFICLSGYPPFSEHRTQVSLKDQITSGKYNFIPEVWAEVSEKALDLVKKLLV-VDPKARF 406
Query: 823 NASEVKAHPFFSNVDFEKGVRTL 845
E HP+ + D ++ + L
Sbjct: 407 TTEEALRHPWLQDEDMKRKFQDL 429
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 55/202 (27%)
Query: 574 EVTLVRKIDTNHLYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
E+T++ + D+ ++ GS L+ +M+Y+ GG + LL + G +E + E+
Sbjct: 75 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREI 133
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
++ +H IHRDIK N+L+ G +KL DF
Sbjct: 134 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADF------------------------- 168
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
G GQ ++ +K ++ VGTP ++APEV+ ++ Y
Sbjct: 169 ----------GVAGQ---LTDTQIK--------------RNTFVGTPFWMAPEVIKQSAY 201
Query: 752 TQLCDWWSVGVILYEMLVGSPP 773
D WS+G+ E+ G PP
Sbjct: 202 DSKADIWSLGITAIELARGEPP 223
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 90/218 (41%), Gaps = 57/218 (26%)
Query: 599 FVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDR- 657
V++ + GG+L +++KG + E A + ++ AV +H+ G +HRD+KP+N+L
Sbjct: 125 LVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENLLYATP 184
Query: 658 --DGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL 715
D +K+ DFGL SK + Q M+ GTPG
Sbjct: 185 APDAPLKIADFGL---------SKIVE------HQVLMKT----VCGTPG---------- 215
Query: 716 KPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFL 775
Y APE+L Y D WSVG+I Y +L G PF
Sbjct: 216 ------------------------YCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPFY 251
Query: 776 ANTSAETQY-KVINWESCLHIPAEAQLSPEGADLILQL 812
+ + +++N E P ++S DL+ +L
Sbjct: 252 DERGDQFMFRRILNCEYYFISPWWDEVSLNAKDLVRKL 289
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 127/319 (39%), Gaps = 71/319 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIY-----KCVGAFGEVTLVRKIDTNHLYVMKGSPHNN- 596
G FG+V + +T L K I + E+ ++ D ++ + G+ +++
Sbjct: 30 GAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG 89
Query: 597 -LYFVMDYIPGG--DLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
L+ ++++ PGG D + L + +G+ EP + ++ A+ +H IHRD+K N+
Sbjct: 90 KLWIMIEFCPGGAVDAIMLELDRGL-TEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNV 148
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L+ +G I+L DFG+ N K Q
Sbjct: 149 LMTLEGDIRLADFGVS-----AKNLKTLQKR----------------------------- 174
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-----RTGYTQLCDWWSVGVILYEML 768
S +GTP ++APEV++ T Y D WS+G+ L EM
Sbjct: 175 ------------------DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA 216
Query: 769 VGSPPFLANTSAETQYKVINWE-SCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEV 827
PP K+ + L P ++ S E D L++ + +A+++
Sbjct: 217 QIEPPHHELNPMRVLLKIAKSDPPTLLTP--SKWSVEFRDF-LKIALDKNPETRPSAAQL 273
Query: 828 KAHPFFSNVDFEKGVRTLT 846
HPF S++ K +R L
Sbjct: 274 LEHPFVSSITSNKALRELV 292
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 65.5 bits (158), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 82/190 (43%), Gaps = 55/190 (28%)
Query: 601 MDYIPGGDLMSLLIKKG-IFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
M+++ GG L +L K G I E+ L + IA + K +HRD+KP NIL++ G
Sbjct: 102 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG 161
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DF G GQ I+S
Sbjct: 162 EIKLCDF-----------------------------------GVSGQ---LIDS------ 177
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTS 779
+A+S VGT +Y++PE L T Y+ D WS+G+ L EM VG P + +
Sbjct: 178 ----------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSG 227
Query: 780 AETQYKVINW 789
+ ++++++
Sbjct: 228 SMAIFELLDY 237
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 55/202 (27%)
Query: 574 EVTLVRKIDTNHLYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
E+T++ + D+ ++ GS L+ +M+Y+ GG + LL + G +E + E+
Sbjct: 70 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREI 128
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
++ +H IHRDIK N+L+ G +KL DF
Sbjct: 129 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADF------------------------- 163
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
G GQ ++ +K + VGTP ++APEV+ ++ Y
Sbjct: 164 ----------GVAGQ---LTDTQIK--------------RNXFVGTPFWMAPEVIKQSAY 196
Query: 752 TQLCDWWSVGVILYEMLVGSPP 773
D WS+G+ E+ G PP
Sbjct: 197 DSKADIWSLGITAIELARGEPP 218
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 84/202 (41%), Gaps = 55/202 (27%)
Query: 574 EVTLVRKIDTNHLYVMKGS--PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
E+T++ + D+ ++ GS L+ +M+Y+ GG + LL + G +E + E+
Sbjct: 55 EITVLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLL-EPGPLDETQIATILREI 113
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
++ +H IHRDIK N+L+ G +KL DF
Sbjct: 114 LKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADF------------------------- 148
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
G GQ ++ +K + VGTP ++APEV+ ++ Y
Sbjct: 149 ----------GVAGQ---LTDTQIK--------------RNXFVGTPFWMAPEVIKQSAY 181
Query: 752 TQLCDWWSVGVILYEMLVGSPP 773
D WS+G+ E+ G PP
Sbjct: 182 DSKADIWSLGITAIELARGEPP 203
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 65.1 bits (157), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/319 (22%), Positives = 127/319 (39%), Gaps = 71/319 (22%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIY-----KCVGAFGEVTLVRKIDTNHLYVMKGSPHNN- 596
G FG+V + +T L K I + E+ ++ D ++ + G+ +++
Sbjct: 22 GAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAYYHDG 81
Query: 597 -LYFVMDYIPGG--DLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
L+ ++++ PGG D + L + +G+ EP + ++ A+ +H IHRD+K N+
Sbjct: 82 KLWIMIEFCPGGAVDAIMLELDRGL-TEPQIQVVCRQMLEALNFLHSKRIIHRDLKAGNV 140
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L+ +G I+L DFG+ N K Q
Sbjct: 141 LMTLEGDIRLADFGVS-----AKNLKTLQKR----------------------------- 166
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-----RTGYTQLCDWWSVGVILYEML 768
S +GTP ++APEV++ T Y D WS+G+ L EM
Sbjct: 167 ------------------DSFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMA 208
Query: 769 VGSPPFLANTSAETQYKVINWE-SCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEV 827
PP K+ + L P ++ S E D L++ + +A+++
Sbjct: 209 QIEPPHHELNPMRVLLKIAKSDPPTLLTP--SKWSVEFRDF-LKIALDKNPETRPSAAQL 265
Query: 828 KAHPFFSNVDFEKGVRTLT 846
HPF S++ K +R L
Sbjct: 266 LEHPFVSSITSNKALRELV 284
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 51/99 (51%), Gaps = 4/99 (4%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLH 794
+GT YIAPEVL R Y + CD WS GVILY +L G PPF T E +V +
Sbjct: 167 LGTAYYIAPEVL-RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFD 225
Query: 795 IPAEAQLSPEGADLI-LQLCTGADKRLGKNASEVKAHPF 832
P Q+S E L+ L L KR+ +A E HP+
Sbjct: 226 PPDWTQVSDEAKQLVKLMLTYEPSKRI--SAEEALNHPW 262
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 17/145 (11%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCV-------GAF-GEVTLVRKIDTNHLYVMK---- 590
G +GEV L + T +K I K GA EV +++++D H +MK
Sbjct: 15 GAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD--HPNIMKLYEF 72
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKP 650
N Y VM+ GG+L +I + F E A + ++ +HK +HRD+KP
Sbjct: 73 FEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIVHRDLKP 132
Query: 651 DNILID---RDGHIKLTDFGLCTGF 672
+N+L++ RD IK+ DFGL F
Sbjct: 133 ENLLLESKSRDALIKIVDFGLSAHF 157
Score = 35.0 bits (79), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 33/60 (55%)
Query: 89 AMKTLRKADVLKRNQVAHVKAERDILAEADNEWVVKLYYSFQDKDNLYFVMDYIPGEKLI 148
A+K ++K+ V + + E +L + D+ ++KLY F+DK N Y VM+ G +L
Sbjct: 33 AIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELF 92
Score = 30.8 bits (68), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 23/122 (18%)
Query: 453 FIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKC-------VGA-FGEVTLVRKIDTNH 504
+ ++K +G GA+GEV L + T A+K I K GA EV +++++D H
Sbjct: 6 YQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLD--H 63
Query: 505 LYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKI-DTNHLYVMK 563
+MK +Y+ F E D + Y++ +Y+ +F E+ L +K + + +MK
Sbjct: 64 PNIMK-LYE----FFE-------DKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK 111
Query: 564 TI 565
+
Sbjct: 112 QV 113
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 99/234 (42%), Gaps = 48/234 (20%)
Query: 548 VTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKG---------SPHNNLY 598
V ++KI L V + + C E+ ++ ++ NH +V+K + LY
Sbjct: 80 VVAIKKI----LRVFEDLIDCKRILREIAILNRL--NHDHVVKVLDIVIPKDVEKFDELY 133
Query: 599 FVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD 658
V++ I D L E + + L V+ VH G +HRD+KP N L+++D
Sbjct: 134 VVLE-IADSDFKKLFRTPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQD 192
Query: 659 GHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPL 718
+K+ DFGL + Y NG+ Q + P E+ + + P
Sbjct: 193 CSVKVCDFGLA-------RTVDYPENGN--SQLPISPRED--------DMNLVTFP---- 231
Query: 719 XXXXXXXHQRCLAHSLVG---TPNYIAPE-VLLRTGYTQLCDWWSVGVILYEML 768
H + L L G T Y APE +LL+ YT+ D WS+G I E+L
Sbjct: 232 -------HTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELL 278
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 76/331 (22%), Positives = 124/331 (37%), Gaps = 101/331 (30%)
Query: 515 VGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFG-------EVTLVRKIDT-NHLYVMKTIY 566
VGA+G V R + H +K++ G G EV L+R+++ H V++ +
Sbjct: 14 VGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMD 73
Query: 567 KCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARF 626
C + + + + H+ +L +D P L + IK L R
Sbjct: 74 VCATSRTDREIKVTLVFEHV-------DQDLRTYLDKAPPPGLPAETIKD------LMRQ 120
Query: 627 YIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGD 686
++ L + +H +HRD+KP+NIL+ G +KL DFGL + +
Sbjct: 121 FLRGL----DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSY------------ 164
Query: 687 HGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVL 746
Q +++P +V T Y APEVL
Sbjct: 165 ---QMALDP--------------------------------------VVVTLWYRAPEVL 183
Query: 747 LRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI---------NWESCLHIPA 797
L++ Y D WSVG I EM P F N+ A+ K+ +W + +P
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPR 243
Query: 798 EA--------------QLSPEGADLILQLCT 814
A ++ GA L+L++ T
Sbjct: 244 GAFPPRGPRPVQSVVPEMEESGAQLLLEMLT 274
Score = 33.1 bits (74), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 448 MDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFG-------EVTLVRKI 500
M S + + IGVGA+G V R + H A+K++ G G EV L+R++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 501 DT-NHLYVMKTIYKC 514
+ H V++ + C
Sbjct: 61 EAFEHPNVVRLMDVC 75
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 78/331 (23%), Positives = 124/331 (37%), Gaps = 101/331 (30%)
Query: 515 VGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFG-------EVTLVRKIDT-NHLYVMKTIY 566
VGA+G V R + H +K++ G G EV L+R+++ H V++ +
Sbjct: 14 VGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMD 73
Query: 567 KCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARF 626
C + + + + H+ +L +D P L + IK L R
Sbjct: 74 VCATSRTDREIKVTLVFEHV-------DQDLRTYLDKAPPPGLPAETIKD------LMRQ 120
Query: 627 YIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGD 686
++ L + +H +HRD+KP+NIL+ G +KL DFGL ++ Y
Sbjct: 121 FLRGL----DFLHANCIVHRDLKPENILVTSGGTVKLADFGL---------ARIYS---- 163
Query: 687 HGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVL 746
+Q LA +V T Y APEVL
Sbjct: 164 ---------------------------------------YQMALAPVVV-TLWYRAPEVL 183
Query: 747 LRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI---------NWESCLHIPA 797
L++ Y D WSVG I EM P F N+ A+ K+ +W + +P
Sbjct: 184 LQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVSLPR 243
Query: 798 EA--------------QLSPEGADLILQLCT 814
A ++ GA L+L++ T
Sbjct: 244 GAFPPRGPRPVQSVVPEMEESGAQLLLEMLT 274
Score = 33.1 bits (74), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 448 MDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFG-------EVTLVRKI 500
M S + + IGVGA+G V R + H A+K++ G G EV L+R++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 501 DT-NHLYVMKTIYKC 514
+ H V++ + C
Sbjct: 61 EAFEHPNVVRLMDVC 75
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 62.8 bits (151), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 94/240 (39%), Gaps = 45/240 (18%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVM 601
VG ++ L I T+H + +C+ G V + Y + + H + M
Sbjct: 46 VGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVK----YCFRKNDH--VVIAM 99
Query: 602 DYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD-GH 660
Y+ + +L F+E R Y+ L A++ +H+ G +HRD+KP N L +R
Sbjct: 100 PYLEHESFLDILNSLS-FQE--VREYMLNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKK 156
Query: 661 IKLTDFGLCTGFRWTHNS-----KYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL 715
L DFGL G TH++ K+ QS Q+ RC +
Sbjct: 157 YALVDFGLAQG---THDTKIELLKFVQSE--------------------AQQERCSQNKC 193
Query: 716 KPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPF 774
R GTP + APEVL + T D WS GVI +L G PF
Sbjct: 194 SICLSRRQQVAPR------AGTPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF 247
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 62.8 bits (151), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 80/324 (24%), Positives = 124/324 (38%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 28 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81
Query: 602 DYIPGG--DLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ D M GI PL + Y+ +L + H +HRD+KP+N+LI+ +G
Sbjct: 82 EFLHQDLKDFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEG 140
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 141 AIKLADFGLARAF-----------------------------GVP--------------- 156
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 157 -------VRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQ-L 812
+ +++ + W +P L +G L+ Q L
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 268
Query: 813 CTGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 269 HYDPNKRISAKAA--LAHPFFQDV 290
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 99/244 (40%), Gaps = 67/244 (27%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH-------- 594
G FG+V L T +K I K V A ++ + + ++L +++ PH
Sbjct: 25 GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIKLYDVI 83
Query: 595 ---NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
+ + V++Y G +L ++++ E AR + ++ AVE H+ +HRD+KP+
Sbjct: 84 KSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPE 142
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCI 711
N+L+D ++K+ DFGL ++G+ + S G+P
Sbjct: 143 NLLLDEHLNVKIADFGLSN----------IMTDGNFLKT---------SCGSP------- 176
Query: 712 NSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ-LCDWWSVGVILYEMLVG 770
NY APEV+ Y D WS GVILY ML
Sbjct: 177 ---------------------------NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCR 209
Query: 771 SPPF 774
PF
Sbjct: 210 RLPF 213
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 100/267 (37%), Gaps = 87/267 (32%)
Query: 565 IYKCVGAFGEVTLVRKI------------DTNHLYVMKGSPHNNLYFVMDYIP------- 605
+YK +GE ++KI + ++K H+N+ + D I
Sbjct: 18 VYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVL 77
Query: 606 -----GGDLMSLL-IKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
DL LL + +G E A+ ++ +L + H +HRD+KP N+LI+R+G
Sbjct: 78 VFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG 137
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
+K+ DFGL F G P
Sbjct: 138 ELKIADFGLARAF-----------------------------GIP--------------- 153
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y AP+VL+ + Y+ D WSVG I EM+ G+P F +
Sbjct: 154 -------VRKYTHEIV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS 205
Query: 779 SAETQYKVI---------NWESCLHIP 796
A+ ++ NW + +P
Sbjct: 206 EADQLMRIFRILGTPNSKNWPNVTELP 232
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 100/268 (37%), Gaps = 87/268 (32%)
Query: 564 TIYKCVGAFGEVTLVRKI------------DTNHLYVMKGSPHNNLYFVMDYIP------ 605
+YK +GE ++KI + ++K H+N+ + D I
Sbjct: 17 VVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLV 76
Query: 606 ------GGDLMSLL-IKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD 658
DL LL + +G E A+ ++ +L + H +HRD+KP N+LI+R+
Sbjct: 77 LVFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINRE 136
Query: 659 GHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPL 718
G +K+ DFGL F G P
Sbjct: 137 GELKIADFGLARAF-----------------------------GIP-------------- 153
Query: 719 XXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLAN 777
R H +V T Y AP+VL+ + Y+ D WSVG I EM+ G+P F
Sbjct: 154 --------VRKYTHEVV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGV 204
Query: 778 TSAETQYKVI---------NWESCLHIP 796
+ A+ ++ NW + +P
Sbjct: 205 SEADQLMRIFRILGTPNSKNWPNVTELP 232
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 99/244 (40%), Gaps = 67/244 (27%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH-------- 594
G FG+V L T +K I K V A ++ + + ++L +++ PH
Sbjct: 24 GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIKLYDVI 82
Query: 595 ---NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
+ + V++Y G +L ++++ E AR + ++ AVE H+ +HRD+KP+
Sbjct: 83 KSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPE 141
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCI 711
N+L+D ++K+ DFGL ++G+ + S G+P
Sbjct: 142 NLLLDEHLNVKIADFGLSN----------IMTDGNFLKT---------SCGSP------- 175
Query: 712 NSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ-LCDWWSVGVILYEMLVG 770
NY APEV+ Y D WS GVILY ML
Sbjct: 176 ---------------------------NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCR 208
Query: 771 SPPF 774
PF
Sbjct: 209 RLPF 212
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 61/225 (27%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN--NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
EV+++++I ++ + N ++ +++ + GG+L L +K E A ++ ++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 632 TCAVESVHKMGFIHRDIKPDNI-LIDRD---GHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
V +H + H D+KP+NI L+DR+ IK+ D F H +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID------FGLAHKIDF------- 170
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
G E + I GTP ++APE++
Sbjct: 171 -----------------GNEFKNI-----------------------FGTPEFVAPEIVN 190
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKV--INWE 790
D WS+GVI Y +L G+ PFL +T ET V +N+E
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 100/267 (37%), Gaps = 87/267 (32%)
Query: 565 IYKCVGAFGEVTLVRKI------------DTNHLYVMKGSPHNNLYFVMDYIP------- 605
+YK +GE ++KI + ++K H+N+ + D I
Sbjct: 18 VYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVIHTKKRLVL 77
Query: 606 -----GGDLMSLL-IKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
DL LL + +G E A+ ++ +L + H +HRD+KP N+LI+R+G
Sbjct: 78 VFEHLDQDLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREG 137
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
+K+ DFGL F G P
Sbjct: 138 ELKIADFGLARAF-----------------------------GIP--------------- 153
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y AP+VL+ + Y+ D WSVG I EM+ G+P F +
Sbjct: 154 -------VRKYTHEVV-TLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVS 205
Query: 779 SAETQYKVI---------NWESCLHIP 796
A+ ++ NW + +P
Sbjct: 206 EADQLMRIFRILGTPNSKNWPNVTELP 232
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 123/324 (37%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 30 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 83
Query: 602 DYIPGG--DLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ D M GI PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 84 EFLSMDLKDFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 142
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 143 AIKLADFGLARAF-----------------------------GVP--------------- 158
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 159 -------VRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 210
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQLC 813
+ +++ + W +P L +G L+ Q+
Sbjct: 211 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 270
Query: 814 -TGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 271 HYDPNKRISAKAA--LAHPFFQDV 292
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 99/244 (40%), Gaps = 67/244 (27%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH-------- 594
G FG+V L T +K I K V A ++ + + ++L +++ PH
Sbjct: 15 GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIKLYDVI 73
Query: 595 ---NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
+ + V++Y G +L ++++ E AR + ++ AVE H+ +HRD+KP+
Sbjct: 74 KSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPE 132
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCI 711
N+L+D ++K+ DFGL ++G+ + S G+P
Sbjct: 133 NLLLDEHLNVKIADFGLSN----------IMTDGNFLKT---------SCGSP------- 166
Query: 712 NSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ-LCDWWSVGVILYEMLVG 770
NY APEV+ Y D WS GVILY ML
Sbjct: 167 ---------------------------NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCR 199
Query: 771 SPPF 774
PF
Sbjct: 200 RLPF 203
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 61/225 (27%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN--NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
EV+++++I ++ + N ++ +++ + GG+L L +K E A ++ ++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 632 TCAVESVHKMGFIHRDIKPDNI-LIDRD---GHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
V +H + H D+KP+NI L+DR+ IK+ D F H +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID------FGLAHKIDF------- 170
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
G E + I GTP ++APE++
Sbjct: 171 -----------------GNEFKNI-----------------------FGTPEFVAPEIVN 190
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKV--INWE 790
D WS+GVI Y +L G+ PFL +T ET V +N+E
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/324 (24%), Positives = 123/324 (37%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 31 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 84
Query: 602 DYIPGG--DLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ D M GI PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 85 EFLSMDLKDFMDASALTGI-PLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 143
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 144 AIKLADFGLARAF-----------------------------GVP--------------- 159
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 160 -------VRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 211
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQLC 813
+ +++ + W +P L +G L+ Q+
Sbjct: 212 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 271
Query: 814 -TGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 272 HYDPNKRISAKAA--LAHPFFQDV 293
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 80/198 (40%), Gaps = 63/198 (31%)
Query: 588 VMKGSPHNNLYFVMDYIPGGDLMSLLIK----KGIFEEPLARFYIAELTCAVESVHKMGF 643
+ K +P++ M+Y GGDL L + G+ E P+ R +++++ A+ +H+
Sbjct: 85 LQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI-RTLLSDISSALRYLHENRI 143
Query: 644 IHRDIKPDNILID----RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEW 699
IHRD+KP+NI++ R H K+ D G Y D G
Sbjct: 144 IHRDLKPENIVLQPGPQRLIH-KIIDLG-------------YAKELDQGE---------- 179
Query: 700 SQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWS 759
L VGT Y+APE+L + YT D+WS
Sbjct: 180 ------------------------------LCTEFVGTLQYLAPELLEQKKYTVTVDYWS 209
Query: 760 VGVILYEMLVGSPPFLAN 777
G + +E + G PFL N
Sbjct: 210 FGTLAFECITGFRPFLPN 227
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 103/264 (39%), Gaps = 73/264 (27%)
Query: 594 HNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTC-----AVESVHKMGFIHRDI 648
NNL+ ++++ GG + +++++ E PL I ++ C A+ +H IHRD+
Sbjct: 106 ENNLWILIEFCAGGAVDAVMLE---LERPLTESQI-QVVCKQTLDALNYLHDNKIIHRDL 161
Query: 649 KPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQEC 708
K NIL DG IKL DFG+ N++ Q R+D
Sbjct: 162 KAGNILFTLDGDIKLADFGVS-----AKNTRXIQ------RRD----------------- 193
Query: 709 RCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-----RTGYTQLCDWWSVGVI 763
S +GTP ++APEV++ Y D WS+G+
Sbjct: 194 ------------------------SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 229
Query: 764 LYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADL--ILQLCTGADKRLG 821
L EM PP K+ E P AQ S ++ L+ C +
Sbjct: 230 LIEMAEIEPPHHELNPMRVLLKIAKSEP----PTLAQPSRWSSNFKDFLKKCLEKNVDAR 285
Query: 822 KNASEVKAHPFFSNVDFEKGVRTL 845
S++ HPF + VD K +R L
Sbjct: 286 WTTSQLLQHPFVT-VDSNKPIREL 308
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 61/225 (27%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN--NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
EV+++++I ++ + N ++ +++ + GG+L L +K E A ++ ++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 632 TCAVESVHKMGFIHRDIKPDNI-LIDRD---GHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
V +H + H D+KP+NI L+DR+ IK+ D F H +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID------FGLAHKIDF------- 170
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
G E + I GTP ++APE++
Sbjct: 171 -----------------GNEFKNI-----------------------FGTPAFVAPEIVN 190
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKV--INWE 790
D WS+GVI Y +L G+ PFL +T ET V +N+E
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/198 (26%), Positives = 80/198 (40%), Gaps = 63/198 (31%)
Query: 588 VMKGSPHNNLYFVMDYIPGGDLMSLLIK----KGIFEEPLARFYIAELTCAVESVHKMGF 643
+ K +P++ M+Y GGDL L + G+ E P+ R +++++ A+ +H+
Sbjct: 84 LQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI-RTLLSDISSALRYLHENRI 142
Query: 644 IHRDIKPDNILID----RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEW 699
IHRD+KP+NI++ R H K+ D G Y D G
Sbjct: 143 IHRDLKPENIVLQPGPQRLIH-KIIDLG-------------YAKELDQGE---------- 178
Query: 700 SQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWS 759
L VGT Y+APE+L + YT D+WS
Sbjct: 179 ------------------------------LCTEFVGTLQYLAPELLEQKKYTVTVDYWS 208
Query: 760 VGVILYEMLVGSPPFLAN 777
G + +E + G PFL N
Sbjct: 209 FGTLAFECITGFRPFLPN 226
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 93/225 (41%), Gaps = 61/225 (27%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN--NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
EV+++++I ++ + N ++ +++ + GG+L L +K E A ++ ++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 632 TCAVESVHKMGFIHRDIKPDNI-LIDRD---GHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
V +H + H D+KP+NI L+DR+ IK+ D F H +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID------FGLAHKIDF------- 170
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
G E + I GTP ++APE++
Sbjct: 171 -----------------GNEFKNI-----------------------FGTPEFVAPEIVN 190
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKV--INWE 790
D WS+GVI Y +L G+ PFL +T ET V +N+E
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 99/244 (40%), Gaps = 67/244 (27%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH-------- 594
G FG+V L T +K I K V A ++ + + ++L +++ PH
Sbjct: 19 GSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLR-HPHIIKLYDVI 77
Query: 595 ---NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
+ + V++Y G +L ++++ E AR + ++ AVE H+ +HRD+KP+
Sbjct: 78 KSKDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYCHRHKIVHRDLKPE 136
Query: 652 NILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCI 711
N+L+D ++K+ DFGL ++G+ + S G+P
Sbjct: 137 NLLLDEHLNVKIADFGLSN----------IMTDGNFLKT---------SCGSP------- 170
Query: 712 NSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ-LCDWWSVGVILYEMLVG 770
NY APEV+ Y D WS GVILY ML
Sbjct: 171 ---------------------------NYAAPEVISGKLYAGPEVDVWSCGVILYVMLCR 203
Query: 771 SPPF 774
PF
Sbjct: 204 RLPF 207
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 74/181 (40%), Gaps = 55/181 (30%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKG-IFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
+ M+++ GG L +L K G I E+ L + IA + K +HRD+KP NI
Sbjct: 104 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 163
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L++ G IKL DF G GQ I+S
Sbjct: 164 LVNSRGEIKLCDF-----------------------------------GVSGQ---LIDS 185
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPP 773
+A+S VGT +Y++PE L T Y+ D WS+G+ L EM VG P
Sbjct: 186 ----------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
Query: 774 F 774
Sbjct: 230 I 230
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLH 794
+GT YIAPEVL T Y + CD WS GVILY +L G PPF + KV +
Sbjct: 212 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 270
Query: 795 IPAEAQLSPEGADLILQLCT 814
+P ++S DLI ++ T
Sbjct: 271 LPQWKKVSESAKDLIRKMLT 290
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 80/182 (43%), Gaps = 26/182 (14%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMK---- 590
G FGEV L + T +K I K EV L++++D H +MK
Sbjct: 60 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD--HPNIMKLYEF 117
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKP 650
Y V + GG+L +I + F E A I ++ + +HK +HRD+KP
Sbjct: 118 FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKP 177
Query: 651 DNILID---RDGHIKLTDFGLCTGFRWTHNSK-------YYQSNGDHGRQDSMEPSEEWS 700
+N+L++ +D +I++ DFGL T F + K Y HG D E + WS
Sbjct: 178 ENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYD--EKCDVWS 235
Query: 701 QG 702
G
Sbjct: 236 TG 237
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 124/324 (38%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 29 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 82
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP+N+LI+ +G
Sbjct: 83 EFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEG 141
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 142 AIKLADFGLARAF-----------------------------GVP--------------- 157
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 158 -------VRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 209
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQLC 813
+ +++ + W +P L +G L+ Q+
Sbjct: 210 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 269
Query: 814 -TGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 270 HYDPNKRISAKAA--LAHPFFQDV 291
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 124/324 (38%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 31 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 84
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP+N+LI+ +G
Sbjct: 85 EFL-SMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEG 143
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 144 AIKLADFGLARAF-----------------------------GVP--------------- 159
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 160 -------VRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 211
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQLC 813
+ +++ + W +P L +G L+ Q+
Sbjct: 212 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 271
Query: 814 -TGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 272 HYDPNKRISAKAA--LAHPFFQDV 293
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 43/80 (53%), Gaps = 1/80 (1%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLH 794
+GT YIAPEVL T Y + CD WS GVILY +L G PPF + KV +
Sbjct: 213 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 271
Query: 795 IPAEAQLSPEGADLILQLCT 814
+P ++S DLI ++ T
Sbjct: 272 LPQWKKVSESAKDLIRKMLT 291
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 80/182 (43%), Gaps = 26/182 (14%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMK---- 590
G FGEV L + T +K I K EV L++++D H +MK
Sbjct: 61 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD--HPNIMKLYEF 118
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKP 650
Y V + GG+L +I + F E A I ++ + +HK +HRD+KP
Sbjct: 119 FEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKP 178
Query: 651 DNILID---RDGHIKLTDFGLCTGFRWTHNSK-------YYQSNGDHGRQDSMEPSEEWS 700
+N+L++ +D +I++ DFGL T F + K Y HG D E + WS
Sbjct: 179 ENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHGTYD--EKCDVWS 236
Query: 701 QG 702
G
Sbjct: 237 TG 238
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 103/264 (39%), Gaps = 73/264 (27%)
Query: 594 HNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTC-----AVESVHKMGFIHRDI 648
NNL+ ++++ GG + +++++ E PL I ++ C A+ +H IHRD+
Sbjct: 106 ENNLWILIEFCAGGAVDAVMLE---LERPLTESQI-QVVCKQTLDALNYLHDNKIIHRDL 161
Query: 649 KPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQEC 708
K NIL DG IKL DFG+ N++ Q R+D
Sbjct: 162 KAGNILFTLDGDIKLADFGVS-----AKNTRTIQ------RRD----------------- 193
Query: 709 RCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-----RTGYTQLCDWWSVGVI 763
S +GTP ++APEV++ Y D WS+G+
Sbjct: 194 ------------------------SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 229
Query: 764 LYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADL--ILQLCTGADKRLG 821
L EM PP K+ E P AQ S ++ L+ C +
Sbjct: 230 LIEMAEIEPPHHELNPMRVLLKIAKSEP----PTLAQPSRWSSNFKDFLKKCLEKNVDAR 285
Query: 822 KNASEVKAHPFFSNVDFEKGVRTL 845
S++ HPF + VD K +R L
Sbjct: 286 WTTSQLLQHPFVT-VDSNKPIREL 308
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 61.6 bits (148), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 74/181 (40%), Gaps = 55/181 (30%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKG-IFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
+ M+++ GG L +L K G I E+ L + IA + K +HRD+KP NI
Sbjct: 139 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 198
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L++ G IKL DF G GQ I+S
Sbjct: 199 LVNSRGEIKLCDF-----------------------------------GVSGQ---LIDS 220
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPP 773
+A+S VGT +Y++PE L T Y+ D WS+G+ L EM VG P
Sbjct: 221 ----------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
Query: 774 F 774
Sbjct: 265 I 265
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 124/324 (38%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 30 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 83
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP+N+LI+ +G
Sbjct: 84 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEG 142
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 143 AIKLADFGLARAF-----------------------------GVP--------------- 158
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 159 -------VRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 210
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQ-L 812
+ +++ + W +P L +G L+ Q L
Sbjct: 211 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 270
Query: 813 CTGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 271 HYDPNKRISAKAA--LAHPFFQDV 292
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 124/324 (38%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 29 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 82
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP+N+LI+ +G
Sbjct: 83 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLINTEG 141
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 142 AIKLADFGLARAF-----------------------------GVP--------------- 157
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 158 -------VRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 209
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQLC 813
+ +++ + W +P L +G L+ Q+
Sbjct: 210 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 269
Query: 814 -TGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 270 HYDPNKRISAKAA--LAHPFFQDV 291
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 61.2 bits (147), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 123/324 (37%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 28 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 82 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 140
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 141 AIKLADFGLARAF-----------------------------GVP--------------- 156
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 157 -------VRTYTHEVV-TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQ-L 812
+ +++ + W +P L +G L+ Q L
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 268
Query: 813 CTGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 269 HYDPNKRISAKAA--LAHPFFQDV 290
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 123/324 (37%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 28 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 82 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLINTEG 140
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 141 AIKLADFGLARAF-----------------------------GVP--------------- 156
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 157 -------VRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQ-L 812
+ +++ + W +P L +G L+ Q L
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 268
Query: 813 CTGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 269 HYDPNKRISAKAA--LAHPFFQDV 290
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 97/246 (39%), Gaps = 71/246 (28%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMD 602
G +G V+ R+ T +K K AF VT ++ L ++K H+N+ + D
Sbjct: 65 GAYGVVSSARRRLTGQQVAIK---KIPNAFDVVTNAKRT-LRELKILKHFKHDNIIAIKD 120
Query: 603 Y----IPGGDLMSLLIKKGIFE----------EPLA----RFYIAELTCAVESVHKMGFI 644
+P G+ S+ + + E +PL R+++ +L ++ +H I
Sbjct: 121 ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVI 180
Query: 645 HRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTP 704
HRD+KP N+L++ + +K+ DFG+ G P+E
Sbjct: 181 HRDLKPSNLLVNENCELKIGDFGMARGL-------------------CTSPAE------- 214
Query: 705 GQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVI 763
HQ + V T Y APE++L YTQ D WSVG I
Sbjct: 215 ---------------------HQYFMT-EYVATRWYRAPELMLSLHEYTQAIDLWSVGCI 252
Query: 764 LYEMLV 769
EML
Sbjct: 253 FGEMLA 258
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 124/324 (38%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 31 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 84
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 85 EFL-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 143
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 144 AIKLADFGLARAF-----------------------------GVP--------------- 159
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 160 -------VRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 211
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQ-L 812
+ +++ + W +P L +G L+ Q L
Sbjct: 212 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 271
Query: 813 CTGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 272 HYDPNKRISAKAA--LAHPFFQDV 293
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 124/324 (38%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 27 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 80
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 81 EHV-HQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 139
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 140 AIKLADFGLARAF-----------------------------GVP--------------- 155
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 156 -------VRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQ-L 812
+ +++ + W +P L +G L+ Q L
Sbjct: 208 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 267
Query: 813 CTGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 268 HYDPNKRISAKAA--LAHPFFQDV 289
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 123/324 (37%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 28 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 82 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 140
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 141 AIKLADFGLARAF-----------------------------GVP--------------- 156
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 157 -------VRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQLC 813
+ +++ + W +P L +G L+ Q+
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 268
Query: 814 -TGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 269 HYDPNKRISAKAA--LAHPFFQDV 290
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 123/324 (37%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 27 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 80
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 81 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 139
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 140 AIKLADFGLARAF-----------------------------GVP--------------- 155
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 156 -------VRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQLC 813
+ +++ + W +P L +G L+ Q+
Sbjct: 208 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 267
Query: 814 -TGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 268 HYDPNKRISAKAA--LAHPFFQDV 289
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 123/324 (37%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 27 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 80
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 81 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 139
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 140 AIKLADFGLARAF-----------------------------GVP--------------- 155
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 156 -------VRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQ-L 812
+ +++ + W +P L +G L+ Q L
Sbjct: 208 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 267
Query: 813 CTGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 268 HYDPNKRISAKAA--LAHPFFQDV 289
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 123/324 (37%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 28 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 82 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 140
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 141 AIKLADFGLARAF-----------------------------GVP--------------- 156
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 157 -------VRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQ-L 812
+ +++ + W +P L +G L+ Q L
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 268
Query: 813 CTGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 269 HYDPNKRISAKAA--LAHPFFQDV 290
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 73/175 (41%), Gaps = 55/175 (31%)
Query: 601 MDYIPGGDLMSLLIKKG-IFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
M+++ GG L +L K G I E+ L + IA + K +HRD+KP NIL++ G
Sbjct: 83 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG 142
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DF G GQ I+S
Sbjct: 143 EIKLCDF-----------------------------------GVSGQ---LIDS------ 158
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
+A+S VGT +Y++PE L T Y+ D WS+G+ L EM VG P
Sbjct: 159 ----------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 86/215 (40%), Gaps = 59/215 (27%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN--NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
EV ++R+I ++ + N ++ +++ + GG+L L +K E A ++ ++
Sbjct: 58 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 117
Query: 632 TCAVESVHKMGFIHRDIKPDNI-LIDRD---GHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
V +H H D+KP+NI L+D++ IKL DF
Sbjct: 118 LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDF--------------------- 156
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
G +E E+ ++ GTP ++APE++
Sbjct: 157 GIAHKIEAGNEFK--------------------------------NIFGTPEFVAPEIVN 184
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAET 782
D WS+GVI Y +L G+ PFL T ET
Sbjct: 185 YEPLGLEADMWSIGVITYILLSGASPFLGETKQET 219
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 60.8 bits (146), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 86/215 (40%), Gaps = 59/215 (27%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN--NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
EV ++R+I ++ + N ++ +++ + GG+L L +K E A ++ ++
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 124
Query: 632 TCAVESVHKMGFIHRDIKPDNI-LIDRD---GHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
V +H H D+KP+NI L+D++ IKL DF
Sbjct: 125 LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDF--------------------- 163
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
G +E E+ ++ GTP ++APE++
Sbjct: 164 GIAHKIEAGNEFK--------------------------------NIFGTPEFVAPEIVN 191
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAET 782
D WS+GVI Y +L G+ PFL T ET
Sbjct: 192 YEPLGLEADMWSIGVITYILLSGASPFLGETKQET 226
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 97/246 (39%), Gaps = 71/246 (28%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMD 602
G +G V+ R+ T +K K AF VT ++ L ++K H+N+ + D
Sbjct: 66 GAYGVVSSARRRLTGQQVAIK---KIPNAFDVVTNAKRT-LRELKILKHFKHDNIIAIKD 121
Query: 603 Y----IPGGDLMSLLIKKGIFE----------EPLA----RFYIAELTCAVESVHKMGFI 644
+P G+ S+ + + E +PL R+++ +L ++ +H I
Sbjct: 122 ILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQVI 181
Query: 645 HRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTP 704
HRD+KP N+L++ + +K+ DFG+ G P+E
Sbjct: 182 HRDLKPSNLLVNENCELKIGDFGMARGL-------------------CTSPAE------- 215
Query: 705 GQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVI 763
HQ + V T Y APE++L YTQ D WSVG I
Sbjct: 216 ---------------------HQYFMT-EYVATRWYRAPELMLSLHEYTQAIDLWSVGCI 253
Query: 764 LYEMLV 769
EML
Sbjct: 254 FGEMLA 259
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 123/324 (37%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 27 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 80
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 81 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 139
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 140 AIKLADFGLARAF-----------------------------GVP--------------- 155
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 156 -------VRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQLC 813
+ +++ + W +P L +G L+ Q+
Sbjct: 208 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 267
Query: 814 -TGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 268 HYDPNKRISAKAA--LAHPFFQDV 289
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 74/181 (40%), Gaps = 55/181 (30%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKG-IFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
+ M+++ GG L +L K G I E+ L + IA + K +HRD+KP NI
Sbjct: 77 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 136
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L++ G IKL DF G GQ I+S
Sbjct: 137 LVNSRGEIKLCDF-----------------------------------GVSGQ---LIDS 158
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPP 773
+A+S VGT +Y++PE L T Y+ D WS+G+ L EM VG P
Sbjct: 159 ----------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
Query: 774 F 774
Sbjct: 203 I 203
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 123/324 (37%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 32 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 85
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 86 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 144
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 145 AIKLADFGLARAF-----------------------------GVP--------------- 160
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 161 -------VRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 212
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQ-L 812
+ +++ + W +P L +G L+ Q L
Sbjct: 213 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 272
Query: 813 CTGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 273 HYDPNKRISAKAA--LAHPFFQDV 294
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 123/324 (37%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 28 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 82 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 140
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 141 AIKLADFGLARAF-----------------------------GVP--------------- 156
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 157 -------VRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQ-L 812
+ +++ + W +P L +G L+ Q L
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 268
Query: 813 CTGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 269 HYDPNKRISAKAA--LAHPFFQDV 290
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 123/324 (37%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 29 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 82
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 83 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 141
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 142 AIKLADFGLARAF-----------------------------GVP--------------- 157
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 158 -------VRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 209
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQ-L 812
+ +++ + W +P L +G L+ Q L
Sbjct: 210 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 269
Query: 813 CTGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 270 HYDPNKRISAKAA--LAHPFFQDV 291
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 123/324 (37%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 27 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 80
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 81 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 139
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 140 AIKLADFGLARAF-----------------------------GVP--------------- 155
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 156 -------VRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQ-L 812
+ +++ + W +P L +G L+ Q L
Sbjct: 208 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 267
Query: 813 CTGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 268 HYDPNKRISAKAA--LAHPFFQDV 289
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 73/175 (41%), Gaps = 55/175 (31%)
Query: 601 MDYIPGGDLMSLLIKKG-IFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
M+++ GG L +L K G I E+ L + IA + K +HRD+KP NIL++ G
Sbjct: 83 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG 142
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DF G GQ I+S
Sbjct: 143 EIKLCDF-----------------------------------GVSGQ---LIDS------ 158
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
+A+S VGT +Y++PE L T Y+ D WS+G+ L EM VG P
Sbjct: 159 ----------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 73/175 (41%), Gaps = 55/175 (31%)
Query: 601 MDYIPGGDLMSLLIKKG-IFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
M+++ GG L +L K G I E+ L + IA + K +HRD+KP NIL++ G
Sbjct: 83 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG 142
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DF G GQ I+S
Sbjct: 143 EIKLCDF-----------------------------------GVSGQ---LIDS------ 158
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
+A+S VGT +Y++PE L T Y+ D WS+G+ L EM VG P
Sbjct: 159 ----------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 74/181 (40%), Gaps = 55/181 (30%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKG-IFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
+ M+++ GG L +L K G I E+ L + IA + K +HRD+KP NI
Sbjct: 77 GEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 136
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L++ G IKL DF G GQ I+S
Sbjct: 137 LVNSRGEIKLCDF-----------------------------------GVSGQ---LIDS 158
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPP 773
+A+S VGT +Y++PE L T Y+ D WS+G+ L EM VG P
Sbjct: 159 ----------------MANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 202
Query: 774 F 774
Sbjct: 203 I 203
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 123/324 (37%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 28 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 82 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 140
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 141 AIKLADFGLARAF-----------------------------GVP--------------- 156
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 157 -------VRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQ-L 812
+ +++ + W +P L +G L+ Q L
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 268
Query: 813 CTGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 269 HYDPNKRISAKAA--LAHPFFQDV 290
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 123/324 (37%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 31 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 84
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 85 EHV-DQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 143
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 144 AIKLADFGLARAF-----------------------------GVP--------------- 159
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 160 -------VRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 211
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQ-L 812
+ +++ + W +P L +G L+ Q L
Sbjct: 212 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 271
Query: 813 CTGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 272 HYDPNKRISAKAA--LAHPFFQDV 293
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 123/324 (37%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 31 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 84
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 85 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 143
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 144 AIKLADFGLARAF-----------------------------GVP--------------- 159
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 160 -------VRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 211
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQ-L 812
+ +++ + W +P L +G L+ Q L
Sbjct: 212 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 271
Query: 813 CTGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 272 HYDPNKRISAKAA--LAHPFFQDV 293
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 123/324 (37%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 30 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 83
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 84 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 142
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 143 AIKLADFGLARAF-----------------------------GVP--------------- 158
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 159 -------VRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 210
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQ-L 812
+ +++ + W +P L +G L+ Q L
Sbjct: 211 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 270
Query: 813 CTGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 271 HYDPNKRISAKAA--LAHPFFQDV 292
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 123/324 (37%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 28 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 82 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 140
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 141 AIKLADFGLARAF-----------------------------GVP--------------- 156
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 157 -------VRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQLC 813
+ +++ + W +P L +G L+ Q+
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 268
Query: 814 -TGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 269 HYDPNKRISAKAA--LAHPFFQDV 290
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/364 (22%), Positives = 136/364 (37%), Gaps = 107/364 (29%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG--EVTLVRKID------TNHLYVMKGSPH 594
G FG V + D+ L +K + + AF E+ ++RK+D + + G
Sbjct: 31 GSFGVVYQAKLCDSGELVAIKKVLQG-KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKK 89
Query: 595 NNLYF--VMDYIPGGDL-MSLLIKKGIFEEPL--ARFYIAELTCAVESVHKMGFIHRDIK 649
+ +Y V+DY+P ++ + P+ + Y+ +L ++ +H G HRDIK
Sbjct: 90 DEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDIK 149
Query: 650 PDNILIDRDGHI-KLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQEC 708
P N+L+D D + KL DFG +++ +G P
Sbjct: 150 PQNLLLDPDTAVLKLCDFG---------------------------SAKQLVRGEPNVSX 182
Query: 709 RCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYEM 767
C + Y APE++ T YT D WS G +L E+
Sbjct: 183 IC--------------------------SRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 216
Query: 768 LVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASE- 826
L+G P F ++ + ++I L P Q+ + + N +E
Sbjct: 217 LLGQPIFPGDSGVDQLVEIIK---VLGTPTREQI----------------REMNPNYTEF 257
Query: 827 ----VKAHPFFSNVDFEKGVRTLTPPH----IPRIQNSMDTSNFDPVDPDKLRNSDSMLD 878
+KAHP + K R TPP R+ T+ P++ + S D
Sbjct: 258 AFPQIKAHP------WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE----ACAHSFFD 307
Query: 879 ELSD 882
EL D
Sbjct: 308 ELRD 311
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/215 (23%), Positives = 86/215 (40%), Gaps = 59/215 (27%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN--NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
EV ++R+I ++ + N ++ +++ + GG+L L +K E A ++ ++
Sbjct: 79 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQI 138
Query: 632 TCAVESVHKMGFIHRDIKPDNI-LIDRD---GHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
V +H H D+KP+NI L+D++ IKL DF
Sbjct: 139 LDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDF--------------------- 177
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
G +E E+ ++ GTP ++APE++
Sbjct: 178 GIAHKIEAGNEFK--------------------------------NIFGTPEFVAPEIVN 205
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAET 782
D WS+GVI Y +L G+ PFL T ET
Sbjct: 206 YEPLGLEADMWSIGVITYILLSGASPFLGETKQET 240
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 123/324 (37%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 35 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 88
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 89 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 147
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 148 AIKLADFGLARAF-----------------------------GVP--------------- 163
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 164 -------VRTYTHEVV-TLWYRAPEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 215
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQ-L 812
+ +++ + W +P L +G L+ Q L
Sbjct: 216 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 275
Query: 813 CTGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 276 HYDPNKRISAKAA--LAHPFFQDV 297
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 123/324 (37%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 30 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 83
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 84 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 142
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 143 AIKLADFGLARAF-----------------------------GVP--------------- 158
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 159 -------VRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 210
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQ-L 812
+ +++ + W +P L +G L+ Q L
Sbjct: 211 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 270
Query: 813 CTGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 271 HYDPNKRISAKAA--LAHPFFQDV 292
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 96/238 (40%), Gaps = 48/238 (20%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK-------CVGAFGEVTLVRKIDTNHLYVM------ 589
G FGEV R T +K + + A E+ +++ + ++ +
Sbjct: 29 GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT 88
Query: 590 KGSPHN----NLYFVMDYIP---GGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMG 642
K SP+N ++Y V D+ G L ++L+K + E + + L + +H+
Sbjct: 89 KASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE---IKRVMQMLLNGLYYIHRNK 145
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSK------------YYQSNGDHGRQ 690
+HRD+K N+LI RDG +KL DFGL F NS+ Y G +
Sbjct: 146 ILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGER 205
Query: 691 DSMEPSEEWSQGTPGQECRCINSPL---KPLXXXXXXXHQRCLAHSLVGTPNYIAPEV 745
D P + W G CI + + P+ HQ L L G+ I PEV
Sbjct: 206 DYGPPIDLWGAG-------CIMAEMWTRSPIMQGNTEQHQLALISQLCGS---ITPEV 253
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 42/80 (52%), Gaps = 1/80 (1%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLH 794
+GT YIAPEVL T Y + CD WS GVILY +L G PPF + KV +
Sbjct: 189 IGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYTFE 247
Query: 795 IPAEAQLSPEGADLILQLCT 814
+P ++S DLI + T
Sbjct: 248 LPQWKKVSESAKDLIRKXLT 267
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 80/180 (44%), Gaps = 22/180 (12%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK--------CVGAFGEVTLVRKIDTNHLYVMKGSPH 594
G FGEV L + T +K I K EV L++++D ++ +
Sbjct: 37 GSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLYEFFE 96
Query: 595 NNLYF--VMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
+ YF V + GG+L +I + F E A I ++ + HK +HRD+KP+N
Sbjct: 97 DKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNKIVHRDLKPEN 156
Query: 653 ILID---RDGHIKLTDFGLCTGFRWTHNSK-------YYQSNGDHGRQDSMEPSEEWSQG 702
+L++ +D +I++ DFGL T F + K Y HG D E + WS G
Sbjct: 157 LLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHGTYD--EKCDVWSTG 214
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 123/324 (37%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 29 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 82
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 83 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 141
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 142 AIKLADFGLARAF-----------------------------GVP--------------- 157
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 158 -------VRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 209
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQ-L 812
+ +++ + W +P L +G L+ Q L
Sbjct: 210 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 269
Query: 813 CTGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 270 HYDPNKRISAKAA--LAHPFFQDV 291
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 82/355 (23%), Positives = 134/355 (37%), Gaps = 95/355 (26%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVG-VFGEVTLVRKI--DTNHLYVMKTIYKCVGAF 572
G G + +K++ +YK + GEV ++KI DT V T A
Sbjct: 1 GPLGSMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPST------AI 54
Query: 573 GEVTLVRKIDTNHLYVMKGSPH--NNLYFVMDYIPGGDLMSLLIKKGI--FEEPLARFYI 628
E++L+++++ ++ + H N LY V +++ DL + + PL + Y+
Sbjct: 55 REISLLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYL 113
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHG 688
+L + H +HRD+KP N+LI+ +G IKL DFGL F
Sbjct: 114 FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAF---------------- 157
Query: 689 RQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLR 748
G P R H +V T Y APE+LL
Sbjct: 158 -------------GVP----------------------VRTYXHEVV-TLWYRAPEILLG 181
Query: 749 TG-YTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKV---------INWESCLHIP-- 796
Y+ D WS+G I EM+ F ++ + +++ + W +P
Sbjct: 182 CKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY 241
Query: 797 --------------AEAQLSPEGADLILQLC-TGADKRLGKNASEVKAHPFFSNV 836
L +G L+ Q+ +KR+ A+ AHPFF +V
Sbjct: 242 KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA--LAHPFFQDV 294
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/241 (23%), Positives = 90/241 (37%), Gaps = 59/241 (24%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFE--EPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
L + ++I G D+ I FE E Y+ ++ A++ +H H DI+P+NI+
Sbjct: 76 LVMIFEFISGLDIFER-INTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFDIRPENII 134
Query: 655 ID--RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
R IK+ +FG + Q PG R
Sbjct: 135 YQTRRSSTIKIIEFG------------------------------QARQLKPGDNFRL-- 162
Query: 713 SPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
L P Y APEV + D WS+G ++Y +L G
Sbjct: 163 ---------------------LFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGIN 201
Query: 773 PFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPF 832
PFLA T+ + ++N E A ++S E D + +L +++ ASE HP+
Sbjct: 202 PFLAETNQQIIENIMNAEYTFDEEAFKEISIEAMDFVDRLLV-KERKSRMTASEALQHPW 260
Query: 833 F 833
Sbjct: 261 L 261
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/262 (24%), Positives = 103/262 (39%), Gaps = 62/262 (23%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIY----KCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGA 571
GAFG+V R + Y +K I K + EV L+ + NH YV++ +
Sbjct: 17 GAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASL--NHQYVVRYYAAWLER 74
Query: 572 FGEV---TLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
V T V+K T L+ +Y L L+ + + ++ + +
Sbjct: 75 RNFVKPXTAVKKKST-------------LFIQXEYCENRTLYDLIHSENLNQQRDEYWRL 121
Query: 629 -AELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
++ A+ +H G IHR++KP NI ID ++K+ DFGL H
Sbjct: 122 FRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNV--------------H 167
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
D ++ SQ PG S +GT Y+A EVL
Sbjct: 168 RSLDILKLD---SQNLPGSSDNLT---------------------SAIGTAXYVATEVLD 203
Query: 748 RTG-YTQLCDWWSVGVILYEML 768
TG Y + D +S+G+I +E +
Sbjct: 204 GTGHYNEKIDXYSLGIIFFEXI 225
Score = 30.8 bits (68), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 31/63 (49%), Gaps = 6/63 (9%)
Query: 451 SMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIY----KCVGAFGEVTLVRKIDTNHLY 506
S F +I +G GAFG+V R + YA+K I K EV L+ + NH Y
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASL--NHQY 63
Query: 507 VMK 509
V++
Sbjct: 64 VVR 66
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 74/181 (40%), Gaps = 55/181 (30%)
Query: 595 NNLYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
+ M+++ GG L +L + K I EE L + IA L K +HRD+KP NI
Sbjct: 87 GEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNI 146
Query: 654 LIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
L++ G IKL DF G GQ I+S
Sbjct: 147 LVNSRGEIKLCDF-----------------------------------GVSGQ---LIDS 168
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPP 773
+A+S VGT +Y+APE L T Y+ D WS+G+ L E+ VG P
Sbjct: 169 ----------------MANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYP 212
Query: 774 F 774
Sbjct: 213 I 213
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 60.5 bits (145), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 77/324 (23%), Positives = 123/324 (37%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 35 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 88
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 89 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 147
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 148 AIKLADFGLARAF-----------------------------GVP--------------- 163
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 164 -------VRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 215
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQLC 813
+ +++ + W +P L +G L+ Q+
Sbjct: 216 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 275
Query: 814 -TGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 276 HYDPNKRISAKAA--LAHPFFQDV 297
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 123/324 (37%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 31 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 84
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 85 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 143
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 144 AIKLADFGLARAF-----------------------------GVP--------------- 159
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 160 -------VRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 211
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQ-L 812
+ +++ + W +P L +G L+ Q L
Sbjct: 212 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 271
Query: 813 CTGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 272 HYDPNKRISAKAA--LAHPFFQDV 293
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 123/324 (37%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 29 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 82
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 83 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 141
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 142 AIKLADFGLARAF-----------------------------GVP--------------- 157
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 158 -------VRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 209
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQ-L 812
+ +++ + W +P L +G L+ Q L
Sbjct: 210 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 269
Query: 813 CTGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 270 HYDPNKRISAKAA--LAHPFFQDV 291
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 96/242 (39%), Gaps = 56/242 (23%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK-------CVGAFGEVTLVRKIDTNHLYVM------ 589
G FGEV R T +K + + A E+ +++ + ++ +
Sbjct: 29 GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT 88
Query: 590 KGSPHN----NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVES-------V 638
K SP+N ++Y V D+ DL G+ L +F ++E+ ++ +
Sbjct: 89 KASPYNRCKASIYLVFDFCEH-DL------AGLLSNVLVKFTLSEIKRVMQMLLNGLYYI 141
Query: 639 HKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSK------------YYQSNGD 686
H+ +HRD+K N+LI RDG +KL DFGL F NS+ Y
Sbjct: 142 HRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL 201
Query: 687 HGRQDSMEPSEEWSQGTPGQECRCINSPL---KPLXXXXXXXHQRCLAHSLVGTPNYIAP 743
G +D P + W G CI + + P+ HQ L L G+ I P
Sbjct: 202 LGERDYGPPIDLWGAG-------CIMAEMWTRSPIMQGNTEQHQLALISQLCGS---ITP 251
Query: 744 EV 745
EV
Sbjct: 252 EV 253
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 99/241 (41%), Gaps = 46/241 (19%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK-------CVGAFGEVTLVRKIDTNHLYVMKGS--- 592
G +G V L +T +K + + C E+T++ ++ ++++ +
Sbjct: 37 GSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIP 96
Query: 593 ----PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
+ LY V++ I DL L E + + L +H+ G IHRD+
Sbjct: 97 DDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGIIHRDL 155
Query: 649 KPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQEC 708
KP N L+++D +K+ DFGL ++ S D + +E +EE PG
Sbjct: 156 KPANCLLNQDCSVKVCDFGL---------ARTINSEKDTNIVNDLEENEE-----PGPHN 201
Query: 709 RCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPE-VLLRTGYTQLCDWWSVGVILYEM 767
+ + L S V T Y APE +LL+ YT+ D WS G I E+
Sbjct: 202 KNLKKQLT----------------SHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAEL 245
Query: 768 L 768
L
Sbjct: 246 L 246
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 96/242 (39%), Gaps = 56/242 (23%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK-------CVGAFGEVTLVRKIDTNHLYVM------ 589
G FGEV R T +K + + A E+ +++ + ++ +
Sbjct: 28 GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT 87
Query: 590 KGSPHN----NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVES-------V 638
K SP+N ++Y V D+ DL G+ L +F ++E+ ++ +
Sbjct: 88 KASPYNRCKGSIYLVFDFCEH-DL------AGLLSNVLVKFTLSEIKRVMQMLLNGLYYI 140
Query: 639 HKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSK------------YYQSNGD 686
H+ +HRD+K N+LI RDG +KL DFGL F NS+ Y
Sbjct: 141 HRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL 200
Query: 687 HGRQDSMEPSEEWSQGTPGQECRCINSPL---KPLXXXXXXXHQRCLAHSLVGTPNYIAP 743
G +D P + W G CI + + P+ HQ L L G+ I P
Sbjct: 201 LGERDYGPPIDLWGAG-------CIMAEMWTRSPIMQGNTEQHQLALISQLCGS---ITP 250
Query: 744 EV 745
EV
Sbjct: 251 EV 252
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/225 (24%), Positives = 92/225 (40%), Gaps = 61/225 (27%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN--NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
EV+++++I ++ + N ++ + + + GG+L L +K E A ++ ++
Sbjct: 64 EVSILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQI 123
Query: 632 TCAVESVHKMGFIHRDIKPDNI-LIDRD---GHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
V +H + H D+KP+NI L+DR+ IK+ D F H +
Sbjct: 124 LNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIID------FGLAHKIDF------- 170
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
G E + I GTP ++APE++
Sbjct: 171 -----------------GNEFKNI-----------------------FGTPEFVAPEIVN 190
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKV--INWE 790
D WS+GVI Y +L G+ PFL +T ET V +N+E
Sbjct: 191 YEPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYE 235
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/264 (25%), Positives = 102/264 (38%), Gaps = 73/264 (27%)
Query: 594 HNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTC-----AVESVHKMGFIHRDI 648
NNL+ ++++ GG + +++++ E PL I ++ C A+ +H IHRD+
Sbjct: 106 ENNLWILIEFCAGGAVDAVMLE---LERPLTESQI-QVVCKQTLDALNYLHDNKIIHRDL 161
Query: 649 KPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQEC 708
K NIL DG IKL DFG+ N++ Q R+D
Sbjct: 162 KAGNILFTLDGDIKLADFGVS-----AKNTRXIQ------RRD----------------- 193
Query: 709 RCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-----RTGYTQLCDWWSVGVI 763
+GTP ++APEV++ Y D WS+G+
Sbjct: 194 ------------------------XFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 229
Query: 764 LYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADL--ILQLCTGADKRLG 821
L EM PP K+ E P AQ S ++ L+ C +
Sbjct: 230 LIEMAEIEPPHHELNPMRVLLKIAKSEP----PTLAQPSRWSSNFKDFLKKCLEKNVDAR 285
Query: 822 KNASEVKAHPFFSNVDFEKGVRTL 845
S++ HPF + VD K +R L
Sbjct: 286 WTTSQLLQHPFVT-VDSNKPIREL 308
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 50/194 (25%), Positives = 77/194 (39%), Gaps = 58/194 (29%)
Query: 587 YVMKGSPHNNLYFVMDYIPGGDLMSLLIKK-GIFE--EPLARFYIAELTCAVESVHKMGF 643
Y+ S + + M+ +PGG L +LL K G + E FY ++ ++ +H
Sbjct: 84 YLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQI 143
Query: 644 IHRDIKPDNILIDR-DGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRDIK DN+LI+ G +K++DFG R + P E
Sbjct: 144 VHRDIKGDNVLINTYSGVLKISDFGTSK------------------RLAGINPCTE---- 181
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT--GYTQLCDWWSV 760
+ GT Y+APE++ + GY + D WS+
Sbjct: 182 ------------------------------TFTGTLQYMAPEIIDKGPRGYGKAADIWSL 211
Query: 761 GVILYEMLVGSPPF 774
G + EM G PPF
Sbjct: 212 GCTIIEMATGKPPF 225
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.1 bits (144), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/242 (25%), Positives = 96/242 (39%), Gaps = 56/242 (23%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK-------CVGAFGEVTLVRKIDTNHLYVM------ 589
G FGEV R T +K + + A E+ +++ + ++ +
Sbjct: 29 GTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRT 88
Query: 590 KGSPHN----NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVES-------V 638
K SP+N ++Y V D+ DL G+ L +F ++E+ ++ +
Sbjct: 89 KASPYNRCKGSIYLVFDFCEH-DL------AGLLSNVLVKFTLSEIKRVMQMLLNGLYYI 141
Query: 639 HKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSK------------YYQSNGD 686
H+ +HRD+K N+LI RDG +KL DFGL F NS+ Y
Sbjct: 142 HRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELL 201
Query: 687 HGRQDSMEPSEEWSQGTPGQECRCINSPL---KPLXXXXXXXHQRCLAHSLVGTPNYIAP 743
G +D P + W G CI + + P+ HQ L L G+ I P
Sbjct: 202 LGERDYGPPIDLWGAG-------CIMAEMWTRSPIMQGNTEQHQLALISQLCGS---ITP 251
Query: 744 EV 745
EV
Sbjct: 252 EV 253
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 109/291 (37%), Gaps = 96/291 (32%)
Query: 583 TNHLYVMKGSPHNNLYF--VMDYIPGGDLMSLLIKKGI-----FEEPLARFYIAELTCAV 635
NH + +P N Y +M+Y+P D + ++K I L YI +L AV
Sbjct: 97 NNHHKSVIVNPSQNKYLNVIMEYVP--DTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAV 154
Query: 636 ESVHKMGFIHRDIKPDNILID-RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSME 694
+H +G HRDIKP N+L++ +D +KL DF G +
Sbjct: 155 GFIHSLGICHRDIKPQNLLVNSKDNTLKLCDF---------------------GSAKKLI 193
Query: 695 PSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-RTGYTQ 753
PSE P C + Y APE++L T YT
Sbjct: 194 PSE------PSVAXIC--------------------------SRFYRAPELMLGATEYTP 221
Query: 754 LCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLS----------- 802
D WS+G + E+++G P F TS + ++I + P + Q+
Sbjct: 222 SIDLWSIGCVFGELILGKPLFSGETSIDQLVRII---QIMGTPTKEQMIRMNPHYTEVRF 278
Query: 803 ------------PEGA-----DLILQLCTGADKRLGKNASEVKAHPFFSNV 836
PEG DL+ Q+ + L N E AHPFF ++
Sbjct: 279 PTLKAKDWRKILPEGTPSLAIDLLEQILR-YEPDLRINPYEAMAHPFFDHL 328
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 69/342 (20%), Positives = 118/342 (34%), Gaps = 95/342 (27%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKT----------IYKCVGAFGEVTLVRKIDTNHLYVMKGS 592
G +G+V R + T L +K I + + + + R I T + +K +
Sbjct: 35 GTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKN 94
Query: 593 P---HNNLYFVMDYIPGGDLMSLL--IKKGIFEEPLARFYIAELTCAVESVHKMGFIHRD 647
P + L+ VM++ G + L+ K +E + E+ + +H+ IHRD
Sbjct: 95 PPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLHQHKVIHRD 154
Query: 648 IKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
IK N+L+ + +KL DFG+ Q + GR++
Sbjct: 155 IKGQNVLLTENAEVKLVDFGVSA-----------QLDRTVGRRN---------------- 187
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-----RTGYTQLCDWWSVGV 762
+ +GTP ++APEV+ Y D WS+G+
Sbjct: 188 -------------------------TFIGTPYWMAPEVIACDENPDATYDFKSDLWSLGI 222
Query: 763 ILYEMLVGSPP----------FLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQL 812
EM G+PP FL + + K W ++
Sbjct: 223 TAIEMAEGAPPLCDMHPMRALFLIPRNPAPRLKSKKWSKKFQS-------------FIES 269
Query: 813 CTGADKRLGKNASEVKAHPFFSNVDFEKGVRTLTPPHIPRIQ 854
C + ++ HPF + E+ VR HI R +
Sbjct: 270 CLVKNHSQRPATEQLMKHPFIRDQPNERQVRIQLKDHIDRTK 311
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 122/324 (37%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV + KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 28 GEVVALXKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 82 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 140
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 141 AIKLADFGLARAF-----------------------------GVP--------------- 156
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 157 -------VRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQ-L 812
+ +++ + W +P L +G L+ Q L
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 268
Query: 813 CTGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 269 HYDPNKRISAKAA--LAHPFFQDV 290
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 59.7 bits (143), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 78/324 (24%), Positives = 122/324 (37%), Gaps = 94/324 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV + KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 27 GEVVALXKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 80
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 81 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 139
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 140 AIKLADFGLARAF-----------------------------GVP--------------- 155
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 156 -------VRTYTHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 207
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQ-L 812
+ +++ + W +P L +G L+ Q L
Sbjct: 208 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 267
Query: 813 CTGADKRLGKNASEVKAHPFFSNV 836
+KR+ A+ AHPFF +V
Sbjct: 268 HYDPNKRISAKAA--LAHPFFQDV 289
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 59.3 bits (142), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 65/264 (24%), Positives = 100/264 (37%), Gaps = 72/264 (27%)
Query: 594 HNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTC-----AVESVHKMGFIHRDI 648
NNL+ ++++ GG + +++++ E PL I ++ C A+ +H IHRD+
Sbjct: 79 ENNLWILIEFCAGGAVDAVMLE---LERPLTESQI-QVVCKQTLDALNYLHDNKIIHRDL 134
Query: 649 KPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQEC 708
K NIL DG IKL DFG+ + R+DS
Sbjct: 135 KAGNILFTLDGDIKLADFGVSAK----------NTRTXIQRRDS---------------- 168
Query: 709 RCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-----RTGYTQLCDWWSVGVI 763
+GTP ++APEV++ Y D WS+G+
Sbjct: 169 -------------------------FIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGIT 203
Query: 764 LYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADL--ILQLCTGADKRLG 821
L EM PP K+ E P AQ S ++ L+ C +
Sbjct: 204 LIEMAEIEPPHHELNPMRVLLKIAKSEP----PTLAQPSRWSSNFKDFLKKCLEKNVDAR 259
Query: 822 KNASEVKAHPFFSNVDFEKGVRTL 845
S++ HPF + VD K +R L
Sbjct: 260 WTTSQLLQHPFVT-VDSNKPIREL 282
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 71/144 (49%), Gaps = 21/144 (14%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG-------------EVTLVRKIDTNHLYVM 589
G GEV L + T ++ I K A G E+ +++K+ NH ++
Sbjct: 146 GACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKL--NHPCII 203
Query: 590 KGSPH---NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHR 646
K + Y V++ + GG+L ++ +E + Y ++ AV+ +H+ G IHR
Sbjct: 204 KIKNFFDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENGIIHR 263
Query: 647 DIKPDNILI---DRDGHIKLTDFG 667
D+KP+N+L+ + D IK+TDFG
Sbjct: 264 DLKPENVLLSSQEEDCLIKITDFG 287
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 59/120 (49%), Gaps = 5/120 (4%)
Query: 730 LAHSLVGTPNYIAPEVLLR---TGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKV 786
L +L GTP Y+APEVL+ GY + D WS+GVIL+ L G PPF + + +
Sbjct: 297 LMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQ 356
Query: 787 INWESCLHIP-AEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPFFSNVDFEKGVRTL 845
I IP A++S + DL+ +L D + E HP+ + D ++ + L
Sbjct: 357 ITSGKYNFIPEVWAEVSEKALDLVKKLLV-VDPKARFTTEEALRHPWLQDEDMKRKFQDL 415
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 83/209 (39%), Gaps = 60/209 (28%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHNNLYF--VMDYIPGGDLMSLLIKK-GIFE--EPLARFYI 628
E+ L + + ++ GS N + M+ +PGG L +LL K G + E FY
Sbjct: 55 EIALHKHLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYT 114
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDR-DGHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
++ ++ +H +HRDIK DN+LI+ G +K++DFG
Sbjct: 115 KQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSK----------------- 157
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
R + P E + GT Y+APE++
Sbjct: 158 -RLAGINPCTE----------------------------------TFTGTLQYMAPEIID 182
Query: 748 RT--GYTQLCDWWSVGVILYEMLVGSPPF 774
+ GY + D WS+G + EM G PPF
Sbjct: 183 KGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/259 (21%), Positives = 96/259 (37%), Gaps = 70/259 (27%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNL----- 597
G +G V R DT + +K + + +V+KI + ++K H NL
Sbjct: 36 GSYGMVMKCRNKDTGRIVAIKKFLES----DDDKMVKKIAMREIKLLKQLRHENLVNLLE 91
Query: 598 --------YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIK 649
Y V +++ L L + + + + Y+ ++ + H IHRDIK
Sbjct: 92 VCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFCHSHNIIHRDIK 151
Query: 650 PDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECR 709
P+NIL+ + G +KL DFG + PG+
Sbjct: 152 PENILVSQSGVVKLCDFGFAR-----------------------------TLAAPGE--- 179
Query: 710 CINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYEML 768
+ V T Y APE+L+ Y + D W++G ++ EM
Sbjct: 180 --------------------VYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMF 219
Query: 769 VGSPPFLANTSAETQYKVI 787
+G P F ++ + Y ++
Sbjct: 220 MGEPLFPGDSDIDQLYHIM 238
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/323 (23%), Positives = 122/323 (37%), Gaps = 94/323 (29%)
Query: 546 GEVTLVRKI--DTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVM 601
GEV ++KI DT V T A E++L+++++ ++ + H N LY V
Sbjct: 28 GEVVALKKIRLDTETEGVPST------AIREISLLKELNHPNIVKLLDVIHTENKLYLVF 81
Query: 602 DYIPGGDLMSLLIKKGI--FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
+++ DL + + PL + Y+ +L + H +HRD+KP N+LI+ +G
Sbjct: 82 EFL-HQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEG 140
Query: 660 HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLX 719
IKL DFGL F G P
Sbjct: 141 AIKLADFGLARAF-----------------------------GVP--------------- 156
Query: 720 XXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANT 778
R H +V T Y APE+LL Y+ D WS+G I EM+ F ++
Sbjct: 157 -------VRTYXHEVV-TLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDS 208
Query: 779 SAETQYKV---------INWESCLHIP----------------AEAQLSPEGADLILQLC 813
+ +++ + W +P L +G L+ Q+
Sbjct: 209 EIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQML 268
Query: 814 -TGADKRLGKNASEVKAHPFFSN 835
+KR+ A+ AHPFF +
Sbjct: 269 HYDPNKRISAKAA--LAHPFFQD 289
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/162 (25%), Positives = 60/162 (37%), Gaps = 53/162 (32%)
Query: 626 FYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
+ + ++ C ++ +H G IHRD+KP NI++ D +K+ DFGL
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA---------------- 173
Query: 686 DHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEV 745
C N + P V T Y APEV
Sbjct: 174 ---------------------RTACTNFMMTPY----------------VVTRYYRAPEV 196
Query: 746 LLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI 787
+L GY D WSVG I+ E++ G F + KVI
Sbjct: 197 ILGMGYAANVDIWSVGCIMGELVKGCVIFQGTDHIDQWNKVI 238
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 93/254 (36%), Gaps = 79/254 (31%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILID 656
+Y VM+ DL S L KK + + Y + AV ++H+ G +H D+KP N LI
Sbjct: 84 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 141
Query: 657 RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLK 716
DG +KL DFG+ + M+P
Sbjct: 142 VDGMLKLIDFGIA---------------------NQMQPDTT------------------ 162
Query: 717 PLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ-----------LCDWWSVGVILY 765
+ S VGT NY+ PE + ++ D WS+G ILY
Sbjct: 163 -----------SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 211
Query: 766 EMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADL-------ILQLCTGADK 818
M G PF ++IN S LH + E D+ +L+ C D
Sbjct: 212 YMTYGKTPF---------QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDP 262
Query: 819 RLGKNASEVKAHPF 832
+ + E+ AHP+
Sbjct: 263 KQRISIPELLAHPY 276
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 48/224 (21%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGF-----RWTHN-- 677
+ Y+ +L V H+ +HRD+KP N+LI+ DG +KL DFGL F +TH
Sbjct: 122 KIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV 181
Query: 678 SKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL---KPLXXXXXXXHQRCLAHSL 734
+ +Y++ D + S+++S CI + + KPL Q S+
Sbjct: 182 TLWYRA------PDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSI 235
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLH 794
+GTPN P +W V + P + + ++ W S
Sbjct: 236 LGTPN---PR-----------EWPQVQEL---------PLWKQRTFQV-FEKKPWSSI-- 269
Query: 795 IPAEAQLSPEGADLILQ-LCTGADKRLGKNASEVKAHPFFSNVD 837
IP Q EG DL+ LC +KR+ +A + HP+F ++D
Sbjct: 270 IPGFCQ---EGIDLLSNMLCFDPNKRI--SARDAMNHPYFKDLD 308
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 135/366 (36%), Gaps = 111/366 (30%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG--EVTLVRKID------TNHLYVMKGSPH 594
G FG V + D+ L +K + + F E+ ++RK+D + + G
Sbjct: 31 GSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKK 89
Query: 595 NNLYF--VMDYIPGGDLMSLLIK-----KGIFEEPLARFYIAELTCAVESVHKMGFIHRD 647
+ +Y V+DY+P + + + + K + Y+ +L ++ +H G HRD
Sbjct: 90 DEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 147
Query: 648 IKPDNILIDRDGHI-KLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQ 706
IKP N+L+D D + KL DFG +++ +G P
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFG---------------------------SAKQLVRGEPNV 180
Query: 707 ECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILY 765
C + Y APE++ T YT D WS G +L
Sbjct: 181 SXIC--------------------------SRYYRAPELIFGATDYTSSIDVWSAGCVLA 214
Query: 766 EMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNAS 825
E+L+G P F ++ + ++I L P Q+ + + N +
Sbjct: 215 ELLLGQPIFPGDSGVDQLVEIIK---VLGTPTREQI----------------REMNPNYT 255
Query: 826 E-----VKAHPFFSNVDFEKGVRTLTPPH----IPRIQNSMDTSNFDPVDPDKLRNSDSM 876
E +KAHP + K R TPP R+ T+ P++ + S
Sbjct: 256 EFKFPQIKAHP------WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE----ACAHSF 305
Query: 877 LDELSD 882
DEL D
Sbjct: 306 FDELRD 311
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 93/254 (36%), Gaps = 79/254 (31%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILID 656
+Y VM+ DL S L KK + + Y + AV ++H+ G +H D+KP N LI
Sbjct: 103 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 160
Query: 657 RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLK 716
DG +KL DFG+ + M+P
Sbjct: 161 VDGMLKLIDFGIA---------------------NQMQPDTT------------------ 181
Query: 717 PLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ-----------LCDWWSVGVILY 765
+ S VGT NY+ PE + ++ D WS+G ILY
Sbjct: 182 -----------SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 230
Query: 766 EMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADL-------ILQLCTGADK 818
M G PF ++IN S LH + E D+ +L+ C D
Sbjct: 231 YMTYGKTPF---------QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDP 281
Query: 819 RLGKNASEVKAHPF 832
+ + E+ AHP+
Sbjct: 282 KQRISIPELLAHPY 295
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 93/254 (36%), Gaps = 79/254 (31%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILID 656
+Y VM+ DL S L KK + + Y + AV ++H+ G +H D+KP N LI
Sbjct: 103 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 160
Query: 657 RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLK 716
DG +KL DFG+ + M+P
Sbjct: 161 VDGMLKLIDFGIA---------------------NQMQPDX------------------- 180
Query: 717 PLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ-----------LCDWWSVGVILY 765
+ S VGT NY+ PE + ++ D WS+G ILY
Sbjct: 181 ----------XXVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 230
Query: 766 EMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADL-------ILQLCTGADK 818
M G PF ++IN S LH + E D+ +L+ C D
Sbjct: 231 YMTYGKTPF---------QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDP 281
Query: 819 RLGKNASEVKAHPF 832
+ + E+ AHP+
Sbjct: 282 KQRISIPELLAHPY 295
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 60/162 (37%), Gaps = 53/162 (32%)
Query: 626 FYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
+ + ++ C ++ +H G IHRD+KP NI++ D +K+ DFGL
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-------------- 175
Query: 686 DHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEV 745
G MEP V T Y APEV
Sbjct: 176 -AGTSFMMEPE--------------------------------------VVTRYYRAPEV 196
Query: 746 LLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI 787
+L GY + D WSVG I+ EM+ F + KVI
Sbjct: 197 ILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVI 238
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 135/366 (36%), Gaps = 111/366 (30%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG--EVTLVRKID------TNHLYVMKGSPH 594
G FG V + D+ L +K + + F E+ ++RK+D + + G
Sbjct: 31 GSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKK 89
Query: 595 NNLYF--VMDYIPGGDLMSLLIK-----KGIFEEPLARFYIAELTCAVESVHKMGFIHRD 647
+ +Y V+DY+P + + + + K + Y+ +L ++ +H G HRD
Sbjct: 90 DEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 147
Query: 648 IKPDNILIDRDGHI-KLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQ 706
IKP N+L+D D + KL DFG +++ +G P
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFG---------------------------SAKQLVRGEPNV 180
Query: 707 ECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILY 765
C + Y APE++ T YT D WS G +L
Sbjct: 181 SXIC--------------------------SRYYRAPELIFGATDYTSSIDVWSAGCVLA 214
Query: 766 EMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNAS 825
E+L+G P F ++ + ++I L P Q+ + + N +
Sbjct: 215 ELLLGQPIFPGDSGVDQLVEIIK---VLGTPTREQI----------------REMNPNYT 255
Query: 826 E-----VKAHPFFSNVDFEKGVRTLTPPH----IPRIQNSMDTSNFDPVDPDKLRNSDSM 876
E +KAHP + K R TPP R+ T+ P++ + S
Sbjct: 256 EFKFPQIKAHP------WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE----ACAHSF 305
Query: 877 LDELSD 882
DEL D
Sbjct: 306 FDELRD 311
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 96/224 (42%), Gaps = 48/224 (21%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGF-----RWTHN-- 677
+ Y+ +L V H+ +HRD+KP N+LI+ DG +KL DFGL F +TH
Sbjct: 122 KIYLYQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV 181
Query: 678 SKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL---KPLXXXXXXXHQRCLAHSL 734
+ +Y++ D + S+++S CI + + KPL Q S+
Sbjct: 182 TLWYRA------PDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSI 235
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLH 794
+GTPN P +W V + P + + ++ W S
Sbjct: 236 LGTPN---PR-----------EWPQVQEL---------PLWKQRTFQV-FEKKPWSSI-- 269
Query: 795 IPAEAQLSPEGADLILQ-LCTGADKRLGKNASEVKAHPFFSNVD 837
IP Q EG DL+ LC +KR+ +A + HP+F ++D
Sbjct: 270 IPGFCQ---EGIDLLSNMLCFDPNKRI--SARDAMNHPYFKDLD 308
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 135/366 (36%), Gaps = 111/366 (30%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG--EVTLVRKID------TNHLYVMKGSPH 594
G FG V + D+ L +K + + F E+ ++RK+D + + G
Sbjct: 35 GSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKK 93
Query: 595 NNLYF--VMDYIPGGDLMSLLIK-----KGIFEEPLARFYIAELTCAVESVHKMGFIHRD 647
+ +Y V+DY+P + + + + K + Y+ +L ++ +H G HRD
Sbjct: 94 DEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 151
Query: 648 IKPDNILIDRDGHI-KLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQ 706
IKP N+L+D D + KL DFG +++ +G P
Sbjct: 152 IKPQNLLLDPDTAVLKLCDFG---------------------------SAKQLVRGEPNV 184
Query: 707 ECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILY 765
C + Y APE++ T YT D WS G +L
Sbjct: 185 SXIC--------------------------SRYYRAPELIFGATDYTSSIDVWSAGCVLA 218
Query: 766 EMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNAS 825
E+L+G P F ++ + ++I L P Q+ + + N +
Sbjct: 219 ELLLGQPIFPGDSGVDQLVEIIK---VLGTPTREQI----------------REMNPNYT 259
Query: 826 E-----VKAHPFFSNVDFEKGVRTLTPPH----IPRIQNSMDTSNFDPVDPDKLRNSDSM 876
E +KAHP + K R TPP R+ T+ P++ + S
Sbjct: 260 EFKFPQIKAHP------WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE----ACAHSF 309
Query: 877 LDELSD 882
DEL D
Sbjct: 310 FDELRD 315
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 135/366 (36%), Gaps = 111/366 (30%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG--EVTLVRKID------TNHLYVMKGSPH 594
G FG V + D+ L +K + + F E+ ++RK+D + + G
Sbjct: 32 GSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKK 90
Query: 595 NNLYF--VMDYIPGGDLMSLLIK-----KGIFEEPLARFYIAELTCAVESVHKMGFIHRD 647
+ +Y V+DY+P + + + + K + Y+ +L ++ +H G HRD
Sbjct: 91 DEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 148
Query: 648 IKPDNILIDRDGHI-KLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQ 706
IKP N+L+D D + KL DFG +++ +G P
Sbjct: 149 IKPQNLLLDPDTAVLKLCDFG---------------------------SAKQLVRGEPNV 181
Query: 707 ECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILY 765
C + Y APE++ T YT D WS G +L
Sbjct: 182 SXIC--------------------------SRYYRAPELIFGATDYTSSIDVWSAGCVLA 215
Query: 766 EMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNAS 825
E+L+G P F ++ + ++I L P Q+ + + N +
Sbjct: 216 ELLLGQPIFPGDSGVDQLVEIIK---VLGTPTREQI----------------REMNPNYT 256
Query: 826 E-----VKAHPFFSNVDFEKGVRTLTPPH----IPRIQNSMDTSNFDPVDPDKLRNSDSM 876
E +KAHP + K R TPP R+ T+ P++ + S
Sbjct: 257 EFKFPQIKAHP------WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE----ACAHSF 306
Query: 877 LDELSD 882
DEL D
Sbjct: 307 FDELRD 312
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHNN--LYFVMDYIPGGDLMSL--LIKKGIFEEPLARFYIA 629
E++++++ D+ H+ GS N L+ VM+Y G + + L K + E+ +A +
Sbjct: 74 EISIMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQS 133
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
L +E +H M IHRDIK NIL++ +GH KL DFG+
Sbjct: 134 TLK-GLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVA 172
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 732 HSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
+ ++GTP ++APEV+ GY + D WS+G+ EM G PP+
Sbjct: 183 NXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPY 225
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 93/254 (36%), Gaps = 79/254 (31%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILID 656
+Y VM+ DL S L KK + + Y + AV ++H+ G +H D+KP N LI
Sbjct: 131 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 188
Query: 657 RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLK 716
DG +KL DFG+ + M+P
Sbjct: 189 VDGMLKLIDFGIA---------------------NQMQPDT------------------- 208
Query: 717 PLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ-----------LCDWWSVGVILY 765
+ S VGT NY+ PE + ++ D WS+G ILY
Sbjct: 209 ----------TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 258
Query: 766 EMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADL-------ILQLCTGADK 818
M G PF ++IN S LH + E D+ +L+ C D
Sbjct: 259 YMTYGKTPF---------QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDP 309
Query: 819 RLGKNASEVKAHPF 832
+ + E+ AHP+
Sbjct: 310 KQRISIPELLAHPY 323
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 93/254 (36%), Gaps = 79/254 (31%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILID 656
+Y VM+ DL S L KK + + Y + AV ++H+ G +H D+KP N LI
Sbjct: 131 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 188
Query: 657 RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLK 716
DG +KL DFG+ + M+P
Sbjct: 189 VDGMLKLIDFGIA---------------------NQMQPDT------------------- 208
Query: 717 PLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ-----------LCDWWSVGVILY 765
+ S VGT NY+ PE + ++ D WS+G ILY
Sbjct: 209 ----------TSVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 258
Query: 766 EMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADL-------ILQLCTGADK 818
M G PF ++IN S LH + E D+ +L+ C D
Sbjct: 259 YMTYGKTPF---------QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDP 309
Query: 819 RLGKNASEVKAHPF 832
+ + E+ AHP+
Sbjct: 310 KQRISIPELLAHPY 323
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 93/254 (36%), Gaps = 79/254 (31%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILID 656
+Y VM+ DL S L KK + + Y + AV ++H+ G +H D+KP N LI
Sbjct: 87 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 144
Query: 657 RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLK 716
DG +KL DFG+ + M+P
Sbjct: 145 VDGMLKLIDFGIA---------------------NQMQPDTT------------------ 165
Query: 717 PLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ-----------LCDWWSVGVILY 765
+ S VGT NY+ PE + ++ D WS+G ILY
Sbjct: 166 -----------SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 214
Query: 766 EMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADL-------ILQLCTGADK 818
M G PF ++IN S LH + E D+ +L+ C D
Sbjct: 215 YMTYGKTPF---------QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDP 265
Query: 819 RLGKNASEVKAHPF 832
+ + E+ AHP+
Sbjct: 266 KQRISIPELLAHPY 279
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 60/162 (37%), Gaps = 53/162 (32%)
Query: 626 FYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
+ + ++ C ++ +H G IHRD+KP NI++ D +K+ DFGL
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLART-------------- 175
Query: 686 DHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEV 745
G MEP V T Y APEV
Sbjct: 176 -AGTSFMMEPE--------------------------------------VVTRYYRAPEV 196
Query: 746 LLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI 787
+L GY + D WSVG I+ EM+ F + KVI
Sbjct: 197 ILGMGYKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVI 238
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDFITERGALQEELARSFF 120
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 160
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/306 (22%), Positives = 125/306 (40%), Gaps = 66/306 (21%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLV-------RKIDTNHLYVMKGS--P 593
G +G V +R + + + +K I V + + L+ R +D G+
Sbjct: 62 GAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGALFR 121
Query: 594 HNNLYFVMDYIPGG--DLMSLLIKKG--IFEEPLARFYIAELTCAVESVH-KMGFIHRDI 648
+++ M+ + +I KG I E+ L + ++ + A+E +H K+ IHRD+
Sbjct: 122 EGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVS-IVKALEHLHSKLSVIHRDV 180
Query: 649 KPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQEC 708
KP N+LI+ G +K+ DFG+ +G+ DS+
Sbjct: 181 KPSNVLINALGQVKMCDFGI-SGYLV----------------DSV--------------A 209
Query: 709 RCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
+ I++ KP P I PE L + GY+ D WS+G+ + E+
Sbjct: 210 KTIDAGCKPYM-----------------APERINPE-LNQKGYSVKSDIWSLGITMIELA 251
Query: 769 VGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVK 828
+ P+ + + Q K + E +PA+ + S E D Q C + + E+
Sbjct: 252 ILRFPYDSWGTPFQQLKQVVEEPSPQLPAD-KFSAEFVDFTSQ-CLKKNSKERPTYPELM 309
Query: 829 AHPFFS 834
HPFF+
Sbjct: 310 QHPFFT 315
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 58/135 (42%), Gaps = 40/135 (29%)
Query: 634 AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSM 693
AVE +H G +HRD+KP NI D +K+ DFGL T + D Q +
Sbjct: 130 AVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM-----------DQDEEEQTVL 178
Query: 694 EPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 753
P +++ T GQ VGT Y++PE + Y+
Sbjct: 179 TPMPAYARHT-GQ----------------------------VGTKLYMSPEQIHGNSYSH 209
Query: 754 LCDWWSVGVILYEML 768
D +S+G+IL+E+L
Sbjct: 210 KVDIFSLGLILFELL 224
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 57.0 bits (136), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 93/254 (36%), Gaps = 79/254 (31%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILID 656
+Y VM+ DL S L KK + + Y + AV ++H+ G +H D+KP N LI
Sbjct: 83 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 140
Query: 657 RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLK 716
DG +KL DFG+ + M+P
Sbjct: 141 VDGMLKLIDFGIA---------------------NQMQPDTT------------------ 161
Query: 717 PLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ-----------LCDWWSVGVILY 765
+ S VGT NY+ PE + ++ D WS+G ILY
Sbjct: 162 -----------SVVKDSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 210
Query: 766 EMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADL-------ILQLCTGADK 818
M G PF ++IN S LH + E D+ +L+ C D
Sbjct: 211 YMTYGKTPF---------QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDP 261
Query: 819 RLGKNASEVKAHPF 832
+ + E+ AHP+
Sbjct: 262 KQRISIPELLAHPY 275
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 117 WQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFG 156
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 163
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 203
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 56.6 bits (135), Expect = 6e-08, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 117 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 156
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 56.6 bits (135), Expect = 7e-08, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 117 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 156
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 161
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 163
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 203
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 135
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 136 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 175
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 188
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 81/366 (22%), Positives = 135/366 (36%), Gaps = 111/366 (30%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG--EVTLVRKID------TNHLYVMKGSPH 594
G FG V + D+ L +K + + F E+ ++RK+D + + G
Sbjct: 31 GSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKK 89
Query: 595 NNLYF--VMDYIPGGDLMSLLIK-----KGIFEEPLARFYIAELTCAVESVHKMGFIHRD 647
+ +Y V+DY+P + + + + K + Y+ +L ++ +H G HRD
Sbjct: 90 DVVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 147
Query: 648 IKPDNILIDRDGHI-KLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQ 706
IKP N+L+D D + KL DFG +++ +G P
Sbjct: 148 IKPQNLLLDPDTAVLKLCDFG---------------------------SAKQLVRGEPNV 180
Query: 707 ECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILY 765
C + Y APE++ T YT D WS G +L
Sbjct: 181 SXIC--------------------------SRYYRAPELIFGATDYTSSIDVWSAGCVLA 214
Query: 766 EMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNAS 825
E+L+G P F ++ + ++I L P Q+ + + N +
Sbjct: 215 ELLLGQPIFPGDSGVDQLVEIIK---VLGTPTREQI----------------REMNPNYT 255
Query: 826 E-----VKAHPFFSNVDFEKGVRTLTPPH----IPRIQNSMDTSNFDPVDPDKLRNSDSM 876
E +KAHP + K R TPP R+ T+ P++ + S
Sbjct: 256 EFKFPQIKAHP------WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE----ACAHSF 305
Query: 877 LDELSD 882
DEL D
Sbjct: 306 FDELRD 311
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 136
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 176
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 56.6 bits (135), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 163
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 203
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 161
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 188
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 189
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 189
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 188
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 136
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 176
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 120
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 160
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 189
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 135
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 136 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 175
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 188
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 56.2 bits (134), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 189
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/241 (24%), Positives = 94/241 (39%), Gaps = 43/241 (17%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK-------CVGAFGEVTLVRKIDTNHLYVMKGS--- 592
G +G V L + N +K + + C E+T++ ++ ++++ +
Sbjct: 39 GSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHDLIIP 98
Query: 593 ----PHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
+ LY V++ I DL L E + + L + +H+ G IHRD+
Sbjct: 99 EDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESGIIHRDL 157
Query: 649 KPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQEC 708
KP N L+++D +K+ DFGL N D + E+ PG
Sbjct: 158 KPANCLLNQDCSVKICDFGLARTI-----------NSDKDIHIVNDLEEKEENEEPGPHN 206
Query: 709 RCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPE-VLLRTGYTQLCDWWSVGVILYEM 767
+ + L S V T Y APE +LL+ YT D WS G I E+
Sbjct: 207 KNLKKQLT----------------SHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAEL 250
Query: 768 L 768
L
Sbjct: 251 L 251
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 161
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 60 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 119
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 120 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 159
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 136
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 176
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 96 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 155
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 156 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 195
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 56.2 bits (134), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 109 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 168
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 169 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 208
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/100 (34%), Positives = 54/100 (54%), Gaps = 6/100 (6%)
Query: 574 EVTLVRKIDTNHLYVMK-----GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYI 628
EV L++K+ + V++ P + + + P DL + ++G +E LAR +
Sbjct: 84 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 143
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFG 667
++ AV H G +HRDIK +NILID + G +KL DFG
Sbjct: 144 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFG 183
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 136/365 (37%), Gaps = 109/365 (29%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG--EVTLVRKID------TNHLYVMKGSPH 594
G FG V + D+ L +K + + AF E+ ++RK+D + + G
Sbjct: 31 GSFGVVYQAKLCDSGELVAIKKVLQG-KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKK 89
Query: 595 NNLYF--VMDYIPGGDLMSLLIK-----KGIFEEPLARFYIAELTCAVESVHKMGFIHRD 647
+ +Y V+DY+P + + + + K + Y+ +L ++ +H G HRD
Sbjct: 90 DEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 147
Query: 648 IKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
IKP N+L+D D + LC D G +++ +G P
Sbjct: 148 IKPQNLLLDPDTAV----LKLC----------------DFGS------AKQLVRGEPNV- 180
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYE 766
S + + Y APE++ T YT D WS G +L E
Sbjct: 181 -------------------------SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 215
Query: 767 MLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASE 826
+L+G P F ++ + ++I L P Q+ + + N +E
Sbjct: 216 LLLGQPIFPGDSGVDQLVEIIK---VLGTPTREQI----------------REMNPNYTE 256
Query: 827 -----VKAHPFFSNVDFEKGVRTLTPPH----IPRIQNSMDTSNFDPVDPDKLRNSDSML 877
+KAHP + K R TPP R+ T+ P++ + S
Sbjct: 257 FAFPQIKAHP------WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE----ACAHSFF 306
Query: 878 DELSD 882
DEL D
Sbjct: 307 DELRD 311
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 56.2 bits (134), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 81/365 (22%), Positives = 136/365 (37%), Gaps = 109/365 (29%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG--EVTLVRKID------TNHLYVMKGSPH 594
G FG V + D+ L +K + + AF E+ ++RK+D + + G
Sbjct: 31 GSFGVVYQAKLCDSGELVAIKKVLQG-KAFKNRELQIMRKLDHCNIVRLRYFFYSSGEKK 89
Query: 595 NNLYF--VMDYIPGGDLMSLLIK-----KGIFEEPLARFYIAELTCAVESVHKMGFIHRD 647
+ +Y V+DY+P + + + + K + Y+ +L ++ +H G HRD
Sbjct: 90 DEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 147
Query: 648 IKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
IKP N+L+D D + LC D G +++ +G P
Sbjct: 148 IKPQNLLLDPDTAV----LKLC----------------DFGS------AKQLVRGEPNV- 180
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYE 766
S + + Y APE++ T YT D WS G +L E
Sbjct: 181 -------------------------SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 215
Query: 767 MLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASE 826
+L+G P F ++ + ++I L P Q+ + + N +E
Sbjct: 216 LLLGQPIFPGDSGVDQLVEIIK---VLGTPTREQI----------------REMNPNYTE 256
Query: 827 -----VKAHPFFSNVDFEKGVRTLTPPH----IPRIQNSMDTSNFDPVDPDKLRNSDSML 877
+KAHP + K R TPP R+ T+ P++ + S
Sbjct: 257 FKFPQIKAHP------WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE----ACAHSFF 306
Query: 878 DELSD 882
DEL D
Sbjct: 307 DELRD 311
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 55.8 bits (133), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 83/248 (33%), Gaps = 90/248 (36%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH-IKLTDFGLCTGFRWTHNSKYYQS 683
RFY+ E+ A++ H MG +HRD+KP N+LID + ++L D+GL +
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVLIDHEHRKLRLIDWGLAEFYH---------- 183
Query: 684 NGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAP 743
PGQE V + + P
Sbjct: 184 --------------------PGQEYNV-----------------------RVASRYFKGP 200
Query: 744 EVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLAN-------------TSAETQYKVIN- 788
E+L+ Y D WS+G +L M+ PF E Y I+
Sbjct: 201 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 260
Query: 789 --------------------WESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVK 828
WE +H + +SPE D + +L D + A E
Sbjct: 261 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR-YDHQSRLTAREAM 319
Query: 829 AHPFFSNV 836
HP+F V
Sbjct: 320 EHPYFYTV 327
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 82/208 (39%), Gaps = 66/208 (31%)
Query: 604 IPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILID-RDGHIK 662
+P DL + +KG E +R + ++ A++ H G +HRDIK +NILID R G K
Sbjct: 121 LPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAK 180
Query: 663 LTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXX 722
L DFG H+ Y +G + SP
Sbjct: 181 LIDFGSGALL---HDEPYTDFDGTR-----------------------VYSP-------- 206
Query: 723 XXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQL-CDWWSVGVILYEMLVGSPPFLANTSAE 781
PE + R Y L WS+G++LY+M+ G PF E
Sbjct: 207 --------------------PEWISRHQYHALPATVWSLGILLYDMVCGDIPF------E 240
Query: 782 TQYKVINWESCLHIPAEAQLSPEGADLI 809
+++ E+ LH P A +SP+ LI
Sbjct: 241 RDQEIL--EAELHFP--AHVSPDCCALI 264
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/225 (25%), Positives = 95/225 (42%), Gaps = 55/225 (24%)
Query: 613 LIKKG--IFEEPLARFYIAELTCAVESVH-KMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
+I KG I E+ L + ++ + A+E +H K+ IHRD+KP N+LI+ G +K+ DFG+
Sbjct: 99 VIDKGQTIPEDILGKIAVS-IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGI- 156
Query: 670 TGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRC 729
+G+ +K I++ KP
Sbjct: 157 SGYLVDDVAKD------------------------------IDAGCKPYM---------- 176
Query: 730 LAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINW 789
P I PE L + GY+ D WS+G+ + E+ + P+ + + Q K +
Sbjct: 177 -------APERINPE-LNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTPFQQLKQVVE 228
Query: 790 ESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPFFS 834
E +PA+ + S E D Q C + + E+ HPFF+
Sbjct: 229 EPSPQLPAD-KFSAEFVDFTSQ-CLKKNSKERPTYPELMQHPFFT 271
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 64/151 (42%), Gaps = 43/151 (28%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSN 684
+++I + AV+ +H IHRD+KP N+LI+ + +K+ DFGL
Sbjct: 115 QYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII------------ 162
Query: 685 GDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPE 744
D D+ EP+ GQ+ + V T Y APE
Sbjct: 163 -DESAADNSEPT--------GQQSGMV---------------------EFVATRWYRAPE 192
Query: 745 VLLRTG-YTQLCDWWSVGVILYEMLVGSPPF 774
V+L + Y++ D WS G IL E+ + P F
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/254 (24%), Positives = 92/254 (36%), Gaps = 79/254 (31%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILID 656
+Y VM+ DL S L KK + + Y + AV ++H+ G +H D+KP N LI
Sbjct: 131 IYMVME-CGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQHGIVHSDLKPANFLI- 188
Query: 657 RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLK 716
DG +KL DFG+ + M+P
Sbjct: 189 VDGMLKLIDFGIA---------------------NQMQPDT------------------- 208
Query: 717 PLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ-----------LCDWWSVGVILY 765
+ S VG NY+ PE + ++ D WS+G ILY
Sbjct: 209 ----------TSVVKDSQVGAVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILY 258
Query: 766 EMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADL-------ILQLCTGADK 818
M G PF ++IN S LH + E D+ +L+ C D
Sbjct: 259 YMTYGKTPF---------QQIINQISKLHAIIDPNHEIEFPDIPEKDLQDVLKCCLKRDP 309
Query: 819 RLGKNASEVKAHPF 832
+ + E+ AHP+
Sbjct: 310 KQRISIPELLAHPY 323
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 102/269 (37%), Gaps = 88/269 (32%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 100 NDVYLVT-HLMGADLNNI-VKSQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 655 IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSP 714
++ D +K+ DFGL CR +
Sbjct: 158 VNEDSELKILDFGL---------------------------------------CRHTDDE 178
Query: 715 LKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPP 773
+ V T Y APE++L Y Q D WSVG I+ E+L G
Sbjct: 179 MT----------------GYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTL 222
Query: 774 F--------------LANTSAETQYKVINWESCL-HIPAEAQL------------SPEGA 806
F L T K I+ ES +I + Q+ +P
Sbjct: 223 FPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAV 282
Query: 807 DLILQ-LCTGADKRLGKNASEVKAHPFFS 834
DL+ + L +DKR+ A++ AH +F+
Sbjct: 283 DLLEKMLVLDSDKRI--TAAQALAHAYFA 309
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 63/151 (41%), Gaps = 43/151 (28%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSN 684
+++I + AV+ +H IHRD+KP N+LI+ + +K+ DFGL
Sbjct: 115 QYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII------------ 162
Query: 685 GDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPE 744
D D+ EP+ + S T V T Y APE
Sbjct: 163 -DESAADNSEPTGQQSGMT-----------------------------EYVATRWYRAPE 192
Query: 745 VLLRTG-YTQLCDWWSVGVILYEMLVGSPPF 774
V+L + Y++ D WS G IL E+ + P F
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 63/151 (41%), Gaps = 43/151 (28%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSN 684
+++I + AV+ +H IHRD+KP N+LI+ + +K+ DFGL
Sbjct: 115 QYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARII------------ 162
Query: 685 GDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPE 744
D D+ EP+ + S T V T Y APE
Sbjct: 163 -DESAADNSEPTGQQSGMT-----------------------------EXVATRWYRAPE 192
Query: 745 VLLRTG-YTQLCDWWSVGVILYEMLVGSPPF 774
V+L + Y++ D WS G IL E+ + P F
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELFLRRPIF 223
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 83/248 (33%), Gaps = 90/248 (36%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH-IKLTDFGLCTGFRWTHNSKYYQS 683
RFY+ E+ A++ H MG +HRD+KP N++ID + ++L D+GL +
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---------- 183
Query: 684 NGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAP 743
PGQE V + + P
Sbjct: 184 --------------------PGQEYNV-----------------------RVASRYFKGP 200
Query: 744 EVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLAN-------------TSAETQYKVIN- 788
E+L+ Y D WS+G +L M+ PF E Y I+
Sbjct: 201 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 260
Query: 789 --------------------WESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVK 828
WE +H + +SPE D + +L D + A E
Sbjct: 261 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR-YDHQSRLTAREAM 319
Query: 829 AHPFFSNV 836
HP+F V
Sbjct: 320 EHPYFYTV 327
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 83/248 (33%), Gaps = 90/248 (36%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH-IKLTDFGLCTGFRWTHNSKYYQS 683
RFY+ E+ A++ H MG +HRD+KP N++ID + ++L D+GL +
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---------- 183
Query: 684 NGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAP 743
PGQE V + + P
Sbjct: 184 --------------------PGQEYNV-----------------------RVASRYFKGP 200
Query: 744 EVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLAN-------------TSAETQYKVIN- 788
E+L+ Y D WS+G +L M+ PF E Y I+
Sbjct: 201 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 260
Query: 789 --------------------WESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVK 828
WE +H + +SPE D + +L D + A E
Sbjct: 261 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR-YDHQSRLTAREAM 319
Query: 829 AHPFFSNV 836
HP+F V
Sbjct: 320 EHPYFYTV 327
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 83/248 (33%), Gaps = 90/248 (36%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH-IKLTDFGLCTGFRWTHNSKYYQS 683
RFY+ E+ A++ H MG +HRD+KP N++ID + ++L D+GL +
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---------- 183
Query: 684 NGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAP 743
PGQE V + + P
Sbjct: 184 --------------------PGQEYNV-----------------------RVASRYFKGP 200
Query: 744 EVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLAN-------------TSAETQYKVIN- 788
E+L+ Y D WS+G +L M+ PF E Y I+
Sbjct: 201 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 260
Query: 789 --------------------WESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVK 828
WE +H + +SPE D + +L D + A E
Sbjct: 261 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR-YDHQSRLTAREAM 319
Query: 829 AHPFFSNV 836
HP+F V
Sbjct: 320 EHPYFYTV 327
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 83/248 (33%), Gaps = 90/248 (36%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH-IKLTDFGLCTGFRWTHNSKYYQS 683
RFY+ E+ A++ H MG +HRD+KP N++ID + ++L D+GL +
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---------- 183
Query: 684 NGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAP 743
PGQE V + + P
Sbjct: 184 --------------------PGQEYNV-----------------------RVASRYFKGP 200
Query: 744 EVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLAN-------------TSAETQYKVIN- 788
E+L+ Y D WS+G +L M+ PF E Y I+
Sbjct: 201 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 260
Query: 789 --------------------WESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVK 828
WE +H + +SPE D + +L D + A E
Sbjct: 261 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR-YDHQSRLTAREAM 319
Query: 829 AHPFFSNV 836
HP+F V
Sbjct: 320 EHPYFYTV 327
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 90/226 (39%), Gaps = 63/226 (27%)
Query: 571 AFGEVTLVRKIDTNHLYVMKGSPH--NNLYFVMDYIPGGDLMSLLIKKGIFEEP------ 622
A E++L++++ ++ + H N L V +++ DL + + + P
Sbjct: 50 AIREISLMKELKHENIVRLYDVIHTENKLTLVFEFM-DNDLKKYMDSRTVGNTPRGLELN 108
Query: 623 LARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQ 682
L +++ +L + H+ +HRD+KP N+LI++ G +KL DFGL
Sbjct: 109 LVKYFQWQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLA------------- 155
Query: 683 SNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIA 742
R P+ S V T Y A
Sbjct: 156 --------------------------RAFGIPVNTFS-------------SEVVTLWYRA 176
Query: 743 PEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI 787
P+VL+ + Y+ D WS G IL EM+ G P F T+ E Q K+I
Sbjct: 177 PDVLMGSRTYSTSIDIWSCGCILAEMITGKPLF-PGTNDEEQLKLI 221
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 83/248 (33%), Gaps = 90/248 (36%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH-IKLTDFGLCTGFRWTHNSKYYQS 683
RFY+ E+ A++ H MG +HRD+KP N++ID + ++L D+GL +
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---------- 183
Query: 684 NGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAP 743
PGQE V + + P
Sbjct: 184 --------------------PGQEYNV-----------------------RVASRYFKGP 200
Query: 744 EVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLAN-------------TSAETQYKVIN- 788
E+L+ Y D WS+G +L M+ PF E Y I+
Sbjct: 201 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 260
Query: 789 --------------------WESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVK 828
WE +H + +SPE D + +L D + A E
Sbjct: 261 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR-YDHQSRLTAREAM 319
Query: 829 AHPFFSNV 836
HP+F V
Sbjct: 320 EHPYFYTV 327
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 83/248 (33%), Gaps = 90/248 (36%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH-IKLTDFGLCTGFRWTHNSKYYQS 683
RFY+ E+ A++ H MG +HRD+KP N++ID + ++L D+GL +
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---------- 183
Query: 684 NGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAP 743
PGQE V + + P
Sbjct: 184 --------------------PGQEYNV-----------------------RVASRYFKGP 200
Query: 744 EVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLAN-------------TSAETQYKVIN- 788
E+L+ Y D WS+G +L M+ PF E Y I+
Sbjct: 201 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 260
Query: 789 --------------------WESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVK 828
WE +H + +SPE D + +L D + A E
Sbjct: 261 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR-YDHQSRLTAREAM 319
Query: 829 AHPFFSNV 836
HP+F V
Sbjct: 320 EHPYFYTV 327
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 83/248 (33%), Gaps = 90/248 (36%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH-IKLTDFGLCTGFRWTHNSKYYQS 683
RFY+ E+ A++ H MG +HRD+KP N++ID + ++L D+GL +
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---------- 183
Query: 684 NGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAP 743
PGQE V + + P
Sbjct: 184 --------------------PGQEYNV-----------------------RVASRYFKGP 200
Query: 744 EVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLAN-------------TSAETQYKVIN- 788
E+L+ Y D WS+G +L M+ PF E Y I+
Sbjct: 201 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 260
Query: 789 --------------------WESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVK 828
WE +H + +SPE D + +L D + A E
Sbjct: 261 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR-YDHQSRLTAREAM 319
Query: 829 AHPFFSNV 836
HP+F V
Sbjct: 320 EHPYFYTV 327
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 83/248 (33%), Gaps = 90/248 (36%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH-IKLTDFGLCTGFRWTHNSKYYQS 683
RFY+ E+ A++ H MG +HRD+KP N++ID + ++L D+GL +
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---------- 183
Query: 684 NGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAP 743
PGQE V + + P
Sbjct: 184 --------------------PGQEYNV-----------------------RVASRYFKGP 200
Query: 744 EVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLAN-------------TSAETQYKVIN- 788
E+L+ Y D WS+G +L M+ PF E Y I+
Sbjct: 201 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 260
Query: 789 --------------------WESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVK 828
WE +H + +SPE D + +L D + A E
Sbjct: 261 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR-YDHQSRLTAREAM 319
Query: 829 AHPFFSNV 836
HP+F V
Sbjct: 320 EHPYFYTV 327
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 83/248 (33%), Gaps = 90/248 (36%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH-IKLTDFGLCTGFRWTHNSKYYQS 683
RFY+ E+ A++ H MG +HRD+KP N++ID + ++L D+GL +
Sbjct: 133 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---------- 182
Query: 684 NGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAP 743
PGQE V + + P
Sbjct: 183 --------------------PGQEYNV-----------------------RVASRYFKGP 199
Query: 744 EVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLAN-------------TSAETQYKVIN- 788
E+L+ Y D WS+G +L M+ PF E Y I+
Sbjct: 200 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 259
Query: 789 --------------------WESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVK 828
WE +H + +SPE D + +L D + A E
Sbjct: 260 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR-YDHQSRLTAREAM 318
Query: 829 AHPFFSNV 836
HP+F V
Sbjct: 319 EHPYFYTV 326
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 83/248 (33%), Gaps = 90/248 (36%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH-IKLTDFGLCTGFRWTHNSKYYQS 683
RFY+ E+ A++ H MG +HRD+KP N++ID + ++L D+GL +
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---------- 183
Query: 684 NGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAP 743
PGQE V + + P
Sbjct: 184 --------------------PGQEYNV-----------------------RVASRYFKGP 200
Query: 744 EVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLAN-------------TSAETQYKVIN- 788
E+L+ Y D WS+G +L M+ PF E Y I+
Sbjct: 201 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 260
Query: 789 --------------------WESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVK 828
WE +H + +SPE D + +L D + A E
Sbjct: 261 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR-YDHQSRLTAREAM 319
Query: 829 AHPFFSNV 836
HP+F V
Sbjct: 320 EHPYFYTV 327
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 55.1 bits (131), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 83/248 (33%), Gaps = 90/248 (36%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH-IKLTDFGLCTGFRWTHNSKYYQS 683
RFY+ E+ A++ H MG +HRD+KP N++ID + ++L D+GL +
Sbjct: 132 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---------- 181
Query: 684 NGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAP 743
PGQE V + + P
Sbjct: 182 --------------------PGQEYNV-----------------------RVASRYFKGP 198
Query: 744 EVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLAN-------------TSAETQYKVIN- 788
E+L+ Y D WS+G +L M+ PF E Y I+
Sbjct: 199 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 258
Query: 789 --------------------WESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVK 828
WE +H + +SPE D + +L D + A E
Sbjct: 259 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR-YDHQSRLTAREAM 317
Query: 829 AHPFFSNV 836
HP+F V
Sbjct: 318 EHPYFYTV 325
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 83/248 (33%), Gaps = 90/248 (36%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH-IKLTDFGLCTGFRWTHNSKYYQS 683
RFY+ E+ A++ H MG +HRD+KP N++ID + ++L D+GL +
Sbjct: 133 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---------- 182
Query: 684 NGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAP 743
PGQE V + + P
Sbjct: 183 --------------------PGQEYNV-----------------------RVASRYFKGP 199
Query: 744 EVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLAN-------------TSAETQYKVIN- 788
E+L+ Y D WS+G +L M+ PF E Y I+
Sbjct: 200 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 259
Query: 789 --------------------WESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVK 828
WE +H + +SPE D + +L D + A E
Sbjct: 260 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR-YDHQSRLTAREAM 318
Query: 829 AHPFFSNV 836
HP+F V
Sbjct: 319 EHPYFYTV 326
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 83/248 (33%), Gaps = 90/248 (36%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH-IKLTDFGLCTGFRWTHNSKYYQS 683
RFY+ E+ A++ H MG +HRD+KP N++ID + ++L D+GL +
Sbjct: 139 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYH---------- 188
Query: 684 NGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAP 743
PGQE V + + P
Sbjct: 189 --------------------PGQEYNV-----------------------RVASRYFKGP 205
Query: 744 EVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLAN-------------TSAETQYKVIN- 788
E+L+ Y D WS+G +L M+ PF E Y I+
Sbjct: 206 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 265
Query: 789 --------------------WESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVK 828
WE +H + +SPE D + +L D + A E
Sbjct: 266 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR-YDHQSRLTAREAM 324
Query: 829 AHPFFSNV 836
HP+F V
Sbjct: 325 EHPYFYTV 332
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 63/170 (37%), Gaps = 54/170 (31%)
Query: 606 GGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTD 665
G DL + + + +EPLA + +L AV + IHRDIK +NI+I D IKL D
Sbjct: 114 GLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLRLKDIIHRDIKDENIVIAEDFTIKLID 173
Query: 666 FGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXX 725
FG S Y G
Sbjct: 174 FG----------SAAYLERGK--------------------------------------- 184
Query: 726 HQRCLAHSLVGTPNYIAPEVLLRTGY-TQLCDWWSVGVILYEMLVGSPPF 774
L ++ GT Y APEVL+ Y + WS+GV LY ++ PF
Sbjct: 185 ----LFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPF 230
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 54.3 bits (129), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 78/210 (37%), Gaps = 61/210 (29%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN----NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIA 629
E+ ++R + H+ KG + +L VM+Y+P G L L + I L F A
Sbjct: 83 EIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQLLLF--A 140
Query: 630 ELTC-AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHG 688
+ C + +H +IHRD+ N+L+D D +K+ DFGL H + +GD
Sbjct: 141 QQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGD-- 198
Query: 689 RQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLR 748
SP+ + APE L
Sbjct: 199 ------------------------SPV-----------------------FWYAPECLKE 211
Query: 749 TGYTQLCDWWSVGVILYEMLV-----GSPP 773
+ D WS GV LYE+L SPP
Sbjct: 212 YKFYYASDVWSFGVTLYELLTHCDSSQSPP 241
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGS----PHNNLY 598
G FGEV + T +K + V E+ + + + + G+ P N++
Sbjct: 85 GSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIF 144
Query: 599 FVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD 658
M+ + GG L L+ ++G E A +Y+ + +E +H +H D+K DN+L+ D
Sbjct: 145 --MELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSD 202
Query: 659 G-HIKLTDFG 667
G H L DFG
Sbjct: 203 GSHAALCDFG 212
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 74/177 (41%), Gaps = 51/177 (28%)
Query: 599 FVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD 658
+++ ++ G DL LL + + + + +++ ++ ++ +H +HRD+KP N+L++
Sbjct: 122 YLVTHLMGADLYKLLKTQHLSNDHIC-YFLYQILRGLKYIHSANVLHRDLKPSNLLLNTT 180
Query: 659 GHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPL 718
+K+ DFGL ++ + DH + + W
Sbjct: 181 XDLKICDFGL---------ARVADPDHDHTGFLTEYVATRW------------------- 212
Query: 719 XXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPF 774
Y APE++L + GYT+ D WSVG IL EML P F
Sbjct: 213 ---------------------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 53.9 bits (128), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 61/130 (46%), Gaps = 7/130 (5%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGS----PHNNLY 598
G FGEV + T +K + V E+ + + + + G+ P N++
Sbjct: 104 GSFGEVHRMEDKQTGFQCAVKKVRLEVFRAEELMACAGLTSPRIVPLYGAVREGPWVNIF 163
Query: 599 FVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD 658
M+ + GG L L+ ++G E A +Y+ + +E +H +H D+K DN+L+ D
Sbjct: 164 --MELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNVLLSSD 221
Query: 659 G-HIKLTDFG 667
G H L DFG
Sbjct: 222 GSHAALCDFG 231
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 133/364 (36%), Gaps = 107/364 (29%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG-EVTLVRKID------TNHLYVMKGSPHN 595
G FG V + D+ L +K + + E+ ++RK+D + + G +
Sbjct: 43 GSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKD 102
Query: 596 NLYF--VMDYIPGGDLMSLLIK-----KGIFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
+Y V+DY+P + + + + K + Y+ +L ++ +H G HRDI
Sbjct: 103 EVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDI 160
Query: 649 KPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQEC 708
KP N+L+D D + LC D G +++ +G P
Sbjct: 161 KPQNLLLDPDTAV----LKLC----------------DFGS------AKQLVRGEPNVSX 194
Query: 709 RCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYEM 767
C + Y APE++ T YT D WS G +L E+
Sbjct: 195 IC--------------------------SRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 228
Query: 768 LVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASE- 826
L+G P F ++ + ++I L P Q+ + + N +E
Sbjct: 229 LLGQPIFPGDSGVDQLVEIIK---VLGTPTREQI----------------REMNPNYTEF 269
Query: 827 ----VKAHPFFSNVDFEKGVRTLTPPH----IPRIQNSMDTSNFDPVDPDKLRNSDSMLD 878
+KAHP + K R TPP R+ T+ P++ + S D
Sbjct: 270 KFPQIKAHP------WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE----ACAHSFFD 319
Query: 879 ELSD 882
EL D
Sbjct: 320 ELRD 323
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 134/365 (36%), Gaps = 109/365 (29%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG--EVTLVRKID------TNHLYVMKGSPH 594
G FG V + D+ L +K + + F E+ ++RK+D + + G
Sbjct: 50 GSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKK 108
Query: 595 NNLYF--VMDYIPGGDLMSLLIK-----KGIFEEPLARFYIAELTCAVESVHKMGFIHRD 647
+ +Y V+DY+P + + + + K + Y+ +L ++ +H G HRD
Sbjct: 109 DEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 166
Query: 648 IKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
IKP N+L+D D + LC D G +++ +G P
Sbjct: 167 IKPQNLLLDPDTAV----LKLC----------------DFGS------AKQLVRGEPNVS 200
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYE 766
C + Y APE++ T YT D WS G +L E
Sbjct: 201 XIC--------------------------SRYYRAPELIFGATDYTSSIDVWSAGCVLAE 234
Query: 767 MLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASE 826
+L+G P F ++ + ++I L P Q+ + + N +E
Sbjct: 235 LLLGQPIFPGDSGVDQLVEIIK---VLGTPTREQI----------------REMNPNYTE 275
Query: 827 -----VKAHPFFSNVDFEKGVRTLTPPH----IPRIQNSMDTSNFDPVDPDKLRNSDSML 877
+KAHP + K R TPP R+ T+ P++ + S
Sbjct: 276 FKFPQIKAHP------WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE----ACAHSFF 325
Query: 878 DELSD 882
DEL D
Sbjct: 326 DELRD 330
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 134/365 (36%), Gaps = 109/365 (29%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG--EVTLVRKID------TNHLYVMKGSPH 594
G FG V + D+ L +K + + F E+ ++RK+D + + G
Sbjct: 39 GSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKK 97
Query: 595 NNLYF--VMDYIPGGDLMSLLIK-----KGIFEEPLARFYIAELTCAVESVHKMGFIHRD 647
+ +Y V+DY+P + + + + K + Y+ +L ++ +H G HRD
Sbjct: 98 DEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 155
Query: 648 IKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
IKP N+L+D D + LC D G +++ +G P
Sbjct: 156 IKPQNLLLDPDTAV----LKLC----------------DFGS------AKQLVRGEPNVS 189
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYE 766
C + Y APE++ T YT D WS G +L E
Sbjct: 190 XIC--------------------------SRYYRAPELIFGATDYTSSIDVWSAGCVLAE 223
Query: 767 MLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASE 826
+L+G P F ++ + ++I L P Q+ + + N +E
Sbjct: 224 LLLGQPIFPGDSGVDQLVEIIK---VLGTPTREQI----------------REMNPNYTE 264
Query: 827 -----VKAHPFFSNVDFEKGVRTLTPPH----IPRIQNSMDTSNFDPVDPDKLRNSDSML 877
+KAHP + K R TPP R+ T+ P++ + S
Sbjct: 265 FKFPQIKAHP------WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE----ACAHSFF 314
Query: 878 DELSD 882
DEL D
Sbjct: 315 DELRD 319
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 134/365 (36%), Gaps = 109/365 (29%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG--EVTLVRKID------TNHLYVMKGSPH 594
G FG V + D+ L +K + + F E+ ++RK+D + + G
Sbjct: 65 GSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKK 123
Query: 595 NNLYF--VMDYIPGGDLMSLLIK-----KGIFEEPLARFYIAELTCAVESVHKMGFIHRD 647
+ +Y V+DY+P + + + + K + Y+ +L ++ +H G HRD
Sbjct: 124 DEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 181
Query: 648 IKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
IKP N+L+D D + LC D G +++ +G P
Sbjct: 182 IKPQNLLLDPDTAV----LKLC----------------DFGS------AKQLVRGEPNVS 215
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYE 766
C + Y APE++ T YT D WS G +L E
Sbjct: 216 XIC--------------------------SRYYRAPELIFGATDYTSSIDVWSAGCVLAE 249
Query: 767 MLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASE 826
+L+G P F ++ + ++I L P Q+ + + N +E
Sbjct: 250 LLLGQPIFPGDSGVDQLVEIIK---VLGTPTREQI----------------REMNPNYTE 290
Query: 827 -----VKAHPFFSNVDFEKGVRTLTPPH----IPRIQNSMDTSNFDPVDPDKLRNSDSML 877
+KAHP + K R TPP R+ T+ P++ + S
Sbjct: 291 FKFPQIKAHP------WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE----ACAHSFF 340
Query: 878 DELSD 882
DEL D
Sbjct: 341 DELRD 345
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 134/365 (36%), Gaps = 109/365 (29%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG--EVTLVRKID------TNHLYVMKGSPH 594
G FG V + D+ L +K + + F E+ ++RK+D + + G
Sbjct: 43 GSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKK 101
Query: 595 NNLYF--VMDYIPGGDLMSLLIK-----KGIFEEPLARFYIAELTCAVESVHKMGFIHRD 647
+ +Y V+DY+P + + + + K + Y+ +L ++ +H G HRD
Sbjct: 102 DEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 159
Query: 648 IKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
IKP N+L+D D + LC D G +++ +G P
Sbjct: 160 IKPQNLLLDPDTAV----LKLC----------------DFGS------AKQLVRGEPNVS 193
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYE 766
C + Y APE++ T YT D WS G +L E
Sbjct: 194 XIC--------------------------SRYYRAPELIFGATDYTSSIDVWSAGCVLAE 227
Query: 767 MLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASE 826
+L+G P F ++ + ++I L P Q+ + + N +E
Sbjct: 228 LLLGQPIFPGDSGVDQLVEIIK---VLGTPTREQI----------------REMNPNYTE 268
Query: 827 -----VKAHPFFSNVDFEKGVRTLTPPH----IPRIQNSMDTSNFDPVDPDKLRNSDSML 877
+KAHP + K R TPP R+ T+ P++ + S
Sbjct: 269 FKFPQIKAHP------WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE----ACAHSFF 318
Query: 878 DELSD 882
DEL D
Sbjct: 319 DELRD 323
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 53.5 bits (127), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 79/364 (21%), Positives = 134/364 (36%), Gaps = 107/364 (29%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG-EVTLVRKID------TNHLYVMKGSPHN 595
G FG V + D+ L +K + + E+ ++RK+D + + G +
Sbjct: 44 GSFGVVYQAKLCDSGELVAIKKVLQDKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKKD 103
Query: 596 NLYF--VMDYIPGGDLMSLLIK-----KGIFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
+Y V+DY+P + + + + K + Y+ +L ++ +H G HRDI
Sbjct: 104 EVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRDI 161
Query: 649 KPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQEC 708
KP N+L+D D + LC D G +++ +G P
Sbjct: 162 KPQNLLLDPDTAV----LKLC----------------DFGS------AKQLVRGEPNV-- 193
Query: 709 RCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYEM 767
S + + Y APE++ T YT D WS G +L E+
Sbjct: 194 ------------------------SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAEL 229
Query: 768 LVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASE- 826
L+G P F ++ + ++I L P Q+ + + N +E
Sbjct: 230 LLGQPIFPGDSGVDQLVEIIK---VLGTPTREQI----------------REMNPNYTEF 270
Query: 827 ----VKAHPFFSNVDFEKGVRTLTPPH----IPRIQNSMDTSNFDPVDPDKLRNSDSMLD 878
+KAHP + K R TPP R+ T+ P++ + S D
Sbjct: 271 KFPQIKAHP------WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE----ACAHSFFD 320
Query: 879 ELSD 882
EL D
Sbjct: 321 ELRD 324
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 135/365 (36%), Gaps = 109/365 (29%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG--EVTLVRKID------TNHLYVMKGSPH 594
G FG V + D+ L +K + + F E+ ++RK+D + + G
Sbjct: 31 GSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKK 89
Query: 595 NNLYF--VMDYIPGGDLMSLLIK-----KGIFEEPLARFYIAELTCAVESVHKMGFIHRD 647
+ +Y V+DY+P + + + + K + Y+ +L ++ +H G HRD
Sbjct: 90 DEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 147
Query: 648 IKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
IKP N+L+D D + LC D G +++ +G P
Sbjct: 148 IKPQNLLLDPDTAV----LKLC----------------DFGS------AKQLVRGEPNV- 180
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYE 766
S + + Y APE++ T YT D WS G +L E
Sbjct: 181 -------------------------SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 215
Query: 767 MLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASE 826
+L+G P F ++ + ++I L P Q+ + + N +E
Sbjct: 216 LLLGQPIFPGDSGVDQLVEIIK---VLGTPTREQI----------------REMNPNYTE 256
Query: 827 -----VKAHPFFSNVDFEKGVRTLTPPH----IPRIQNSMDTSNFDPVDPDKLRNSDSML 877
+KAHP + K R TPP R+ T+ P++ + S
Sbjct: 257 FKFPQIKAHP------WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE----ACAHSFF 306
Query: 878 DELSD 882
DEL D
Sbjct: 307 DELRD 311
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 135/365 (36%), Gaps = 109/365 (29%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG--EVTLVRKID------TNHLYVMKGSPH 594
G FG V + D+ L +K + + F E+ ++RK+D + + G
Sbjct: 65 GSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKK 123
Query: 595 NNLYF--VMDYIPGGDLMSLLIK-----KGIFEEPLARFYIAELTCAVESVHKMGFIHRD 647
+ +Y V+DY+P + + + + K + Y+ +L ++ +H G HRD
Sbjct: 124 DEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 181
Query: 648 IKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
IKP N+L+D D + LC D G +++ +G P
Sbjct: 182 IKPQNLLLDPDTAV----LKLC----------------DFGS------AKQLVRGEPNV- 214
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYE 766
S + + Y APE++ T YT D WS G +L E
Sbjct: 215 -------------------------SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 249
Query: 767 MLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASE 826
+L+G P F ++ + ++I L P Q+ + + N +E
Sbjct: 250 LLLGQPIFPGDSGVDQLVEIIK---VLGTPTREQI----------------REMNPNYTE 290
Query: 827 -----VKAHPFFSNVDFEKGVRTLTPPH----IPRIQNSMDTSNFDPVDPDKLRNSDSML 877
+KAHP + K R TPP R+ T+ P++ + S
Sbjct: 291 FKFPQIKAHP------WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE----ACAHSFF 340
Query: 878 DELSD 882
DEL D
Sbjct: 341 DELRD 345
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 135/365 (36%), Gaps = 109/365 (29%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG--EVTLVRKID------TNHLYVMKGSPH 594
G FG V + D+ L +K + + F E+ ++RK+D + + G
Sbjct: 59 GSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKK 117
Query: 595 NNLYF--VMDYIPGGDLMSLLIK-----KGIFEEPLARFYIAELTCAVESVHKMGFIHRD 647
+ +Y V+DY+P + + + + K + Y+ +L ++ +H G HRD
Sbjct: 118 DEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 175
Query: 648 IKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
IKP N+L+D D + LC D G +++ +G P
Sbjct: 176 IKPQNLLLDPDTAV----LKLC----------------DFGS------AKQLVRGEPNV- 208
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYE 766
S + + Y APE++ T YT D WS G +L E
Sbjct: 209 -------------------------SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 243
Query: 767 MLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASE 826
+L+G P F ++ + ++I L P Q+ + + N +E
Sbjct: 244 LLLGQPIFPGDSGVDQLVEIIK---VLGTPTREQI----------------REMNPNYTE 284
Query: 827 -----VKAHPFFSNVDFEKGVRTLTPPH----IPRIQNSMDTSNFDPVDPDKLRNSDSML 877
+KAHP + K R TPP R+ T+ P++ + S
Sbjct: 285 FKFPQIKAHP------WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE----ACAHSFF 334
Query: 878 DELSD 882
DEL D
Sbjct: 335 DELRD 339
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 86/248 (34%), Gaps = 90/248 (36%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH-IKLTDFGLCTGFRWTHNSKYYQS 683
RFY+ E+ A++ H MG +HRD+KP N++ID + ++L D+GL +++Y
Sbjct: 134 RFYMYEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGL---------AEFYH- 183
Query: 684 NGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAP 743
PGQE V + + P
Sbjct: 184 --------------------PGQEYNV-----------------------RVASRYFKGP 200
Query: 744 EVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLAN-------------TSAETQYKVIN- 788
E+L+ Y D WS+G +L M+ PF E Y I+
Sbjct: 201 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYIDK 260
Query: 789 --------------------WESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVK 828
WE +H + +SPE D + +L D + A E
Sbjct: 261 YNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLR-YDHQSRLTAREAM 319
Query: 829 AHPFFSNV 836
HP+F V
Sbjct: 320 EHPYFYPV 327
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 56/135 (41%), Gaps = 40/135 (29%)
Query: 634 AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSM 693
AVE +H G +HRD+KP NI D +K+ DFGL T + D Q +
Sbjct: 176 AVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAM-----------DQDEEEQTVL 224
Query: 694 EPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 753
P ++ GQ VGT Y++PE + Y+
Sbjct: 225 TPMPAYATHX-GQ----------------------------VGTKLYMSPEQIHGNNYSH 255
Query: 754 LCDWWSVGVILYEML 768
D +S+G+IL+E+L
Sbjct: 256 KVDIFSLGLILFELL 270
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 135/365 (36%), Gaps = 109/365 (29%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG--EVTLVRKID------TNHLYVMKGSPH 594
G FG V + D+ L +K + + F E+ ++RK+D + + G
Sbjct: 36 GSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKK 94
Query: 595 NNLYF--VMDYIPGGDLMSLLIK-----KGIFEEPLARFYIAELTCAVESVHKMGFIHRD 647
+ +Y V+DY+P + + + + K + Y+ +L ++ +H G HRD
Sbjct: 95 DEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 152
Query: 648 IKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
IKP N+L+D D + LC D G +++ +G P
Sbjct: 153 IKPQNLLLDPDTAV----LKLC----------------DFGS------AKQLVRGEPNV- 185
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYE 766
S + + Y APE++ T YT D WS G +L E
Sbjct: 186 -------------------------SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 220
Query: 767 MLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASE 826
+L+G P F ++ + ++I L P Q+ + + N +E
Sbjct: 221 LLLGQPIFPGDSGVDQLVEIIK---VLGTPTREQI----------------REMNPNYTE 261
Query: 827 -----VKAHPFFSNVDFEKGVRTLTPPH----IPRIQNSMDTSNFDPVDPDKLRNSDSML 877
+KAHP + K R TPP R+ T+ P++ + S
Sbjct: 262 FKFPQIKAHP------WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE----ACAHSFF 311
Query: 878 DELSD 882
DEL D
Sbjct: 312 DELRD 316
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 77/340 (22%), Positives = 125/340 (36%), Gaps = 99/340 (29%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTI---YKCVGAFG----EVTLVRKIDTNHLYVMKGSPHN 595
G +GEV TN +K I ++ G G EV+L++++ ++ +K H+
Sbjct: 45 GTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVIHH 104
Query: 596 N--LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
N L+ + +Y DL + K + + ++ +L V H +HRD+KP N+
Sbjct: 105 NHRLHLIFEYAEN-DLKKYMDKNPDVSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNL 163
Query: 654 LIDRDGH-----IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQEC 708
L+ +K+ DFGL F G P
Sbjct: 164 LLSVSDASETPVLKIGDFGLARAF-----------------------------GIP---- 190
Query: 709 RCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEM 767
R H ++ T Y PE+LL + Y+ D WS+ I EM
Sbjct: 191 ------------------IRQFTHEII-TLWYRPPEILLGSRHYSTSVDIWSIACIWAEM 231
Query: 768 LVGSPPFLANTSAETQYKVI---------NWESCLHIPAEAQLSPEGADLILQLCTGAD- 817
L+ +P F ++ + +K+ W +P Q P+ L+ GA
Sbjct: 232 LMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWPGVTALPDWKQSFPKFRGKTLKRVLGALL 291
Query: 818 -----------------KRL-GKNASEVKAHPFFSNVDFE 839
KR+ KNA E HP+FS+ DF+
Sbjct: 292 DDEGLDLLTAMLEMDPVKRISAKNALE---HPYFSHNDFD 328
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 135/365 (36%), Gaps = 109/365 (29%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG--EVTLVRKID------TNHLYVMKGSPH 594
G FG V + D+ L +K + + F E+ ++RK+D + + G
Sbjct: 67 GSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKK 125
Query: 595 NNLYF--VMDYIPGGDLMSLLIK-----KGIFEEPLARFYIAELTCAVESVHKMGFIHRD 647
+ +Y V+DY+P + + + + K + Y+ +L ++ +H G HRD
Sbjct: 126 DEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 183
Query: 648 IKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
IKP N+L+D D + LC D G +++ +G P
Sbjct: 184 IKPQNLLLDPDTAV----LKLC----------------DFGS------AKQLVRGEPNV- 216
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYE 766
S + + Y APE++ T YT D WS G +L E
Sbjct: 217 -------------------------SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 251
Query: 767 MLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASE 826
+L+G P F ++ + ++I L P Q+ + + N +E
Sbjct: 252 LLLGQPIFPGDSGVDQLVEIIK---VLGTPTREQI----------------REMNPNYTE 292
Query: 827 -----VKAHPFFSNVDFEKGVRTLTPPH----IPRIQNSMDTSNFDPVDPDKLRNSDSML 877
+KAHP + K R TPP R+ T+ P++ + S
Sbjct: 293 FKFPQIKAHP------WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE----ACAHSFF 342
Query: 878 DELSD 882
DEL D
Sbjct: 343 DELRD 347
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 135/365 (36%), Gaps = 109/365 (29%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG--EVTLVRKID------TNHLYVMKGSPH 594
G FG V + D+ L +K + + F E+ ++RK+D + + G
Sbjct: 69 GSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKK 127
Query: 595 NNLYF--VMDYIPGGDLMSLLIK-----KGIFEEPLARFYIAELTCAVESVHKMGFIHRD 647
+ +Y V+DY+P + + + + K + Y+ +L ++ +H G HRD
Sbjct: 128 DEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 185
Query: 648 IKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
IKP N+L+D D + LC D G +++ +G P
Sbjct: 186 IKPQNLLLDPDTAV----LKLC----------------DFGS------AKQLVRGEPNV- 218
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYE 766
S + + Y APE++ T YT D WS G +L E
Sbjct: 219 -------------------------SYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAE 253
Query: 767 MLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASE 826
+L+G P F ++ + ++I L P Q+ + + N +E
Sbjct: 254 LLLGQPIFPGDSGVDQLVEIIK---VLGTPTREQI----------------REMNPNYTE 294
Query: 827 -----VKAHPFFSNVDFEKGVRTLTPPH----IPRIQNSMDTSNFDPVDPDKLRNSDSML 877
+KAHP + K R TPP R+ T+ P++ + S
Sbjct: 295 FKFPQIKAHP------WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE----ACAHSFF 344
Query: 878 DELSD 882
DEL D
Sbjct: 345 DELRD 349
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 103/260 (39%), Gaps = 58/260 (22%)
Query: 574 EVTLVRKIDTNHLYVMKGS-PHNNLYFVMDYIPGGDLMSLL-IKKGIFEEPLARFYIAEL 631
E +R+ D H+ + G N ++ +M+ G+L S L ++K + Y +L
Sbjct: 441 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQL 500
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
+ A+ + F+HRDI N+L+ + +KL DFGL R+ +S YY++
Sbjct: 501 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS---RYMEDSTYYKA-------- 549
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
S+G P+K ++APE + +
Sbjct: 550 --------SKG---------KLPIK-----------------------WMAPESINFRRF 569
Query: 752 TQLCDWWSVGVILYEMLV-GSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLIL 810
T D W GV ++E+L+ G PF + + ++ N E +P P L+
Sbjct: 570 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLYSLMT 626
Query: 811 QLCTGADKRLGKNASEVKAH 830
+ C D +E+KA
Sbjct: 627 K-CWAYDPSRRPRFTELKAQ 645
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 80/365 (21%), Positives = 134/365 (36%), Gaps = 109/365 (29%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFG--EVTLVRKID------TNHLYVMKGSPH 594
G FG V + D+ L +K + + F E+ ++RK+D + + G
Sbjct: 110 GSFGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQIMRKLDHCNIVRLRYFFYSSGEKK 168
Query: 595 NNLYF--VMDYIPGGDLMSLLIK-----KGIFEEPLARFYIAELTCAVESVHKMGFIHRD 647
+ +Y V+DY+P + + + + K + Y+ +L ++ +H G HRD
Sbjct: 169 DEVYLNLVLDYVP--ETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYIHSFGICHRD 226
Query: 648 IKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
IKP N+L+D D + LC D G +++ +G P
Sbjct: 227 IKPQNLLLDPDTAV----LKLC----------------DFGS------AKQLVRGEPNVS 260
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYE 766
C + Y APE++ T YT D WS G +L E
Sbjct: 261 YIC--------------------------SRYYRAPELIFGATDYTSSIDVWSAGCVLAE 294
Query: 767 MLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASE 826
+L+G P F ++ + ++I L P Q+ + + N +E
Sbjct: 295 LLLGQPIFPGDSGVDQLVEIIK---VLGTPTREQI----------------REMNPNYTE 335
Query: 827 -----VKAHPFFSNVDFEKGVRTLTPPH----IPRIQNSMDTSNFDPVDPDKLRNSDSML 877
+KAHP + K R TPP R+ T+ P++ + S
Sbjct: 336 FKFPQIKAHP------WTKVFRPRTPPEAIALCSRLLEYTPTARLTPLE----ACAHSFF 385
Query: 878 DELSD 882
DEL D
Sbjct: 386 DELRD 390
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 103/260 (39%), Gaps = 58/260 (22%)
Query: 574 EVTLVRKIDTNHLYVMKGS-PHNNLYFVMDYIPGGDLMSLL-IKKGIFEEPLARFYIAEL 631
E +R+ D H+ + G N ++ +M+ G+L S L ++K + Y +L
Sbjct: 58 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 117
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
+ A+ + F+HRDI N+L+ + +KL DFGL R+ +S YY++
Sbjct: 118 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS---RYMEDSTYYKA-------- 166
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
S+G P+K ++APE + +
Sbjct: 167 --------SKG---------KLPIK-----------------------WMAPESINFRRF 186
Query: 752 TQLCDWWSVGVILYEMLV-GSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLIL 810
T D W GV ++E+L+ G PF + + ++ N E +P P L+
Sbjct: 187 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLYSLMT 243
Query: 811 QLCTGADKRLGKNASEVKAH 830
+ C D +E+KA
Sbjct: 244 K-CWAYDPSRRPRFTELKAQ 262
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 94/225 (41%), Gaps = 55/225 (24%)
Query: 613 LIKKG--IFEEPLARFYIAELTCAVESVH-KMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
+I KG I E+ L + ++ + A+E +H K+ IHRD+KP N+LI+ G +K DFG+
Sbjct: 126 VIDKGQTIPEDILGKIAVS-IVKALEHLHSKLSVIHRDVKPSNVLINALGQVKXCDFGI- 183
Query: 670 TGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRC 729
+G+ +K I++ KP
Sbjct: 184 SGYLVDDVAKD------------------------------IDAGCKPYX---------- 203
Query: 730 LAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINW 789
P I PE L + GY+ D WS+G+ E+ + P+ + + Q K +
Sbjct: 204 -------APERINPE-LNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTPFQQLKQVVE 255
Query: 790 ESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPFFS 834
E +PA+ + S E D Q C + + E+ HPFF+
Sbjct: 256 EPSPQLPAD-KFSAEFVDFTSQ-CLKKNSKERPTYPELXQHPFFT 298
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 103/260 (39%), Gaps = 58/260 (22%)
Query: 574 EVTLVRKIDTNHLYVMKGS-PHNNLYFVMDYIPGGDLMSLL-IKKGIFEEPLARFYIAEL 631
E +R+ D H+ + G N ++ +M+ G+L S L ++K + Y +L
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 120
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
+ A+ + F+HRDI N+L+ + +KL DFGL R+ +S YY++
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS---RYMEDSTYYKA-------- 169
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
S+G P+K ++APE + +
Sbjct: 170 --------SKG---------KLPIK-----------------------WMAPESINFRRF 189
Query: 752 TQLCDWWSVGVILYEMLV-GSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLIL 810
T D W GV ++E+L+ G PF + + ++ N E +P P L+
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLYSLMT 246
Query: 811 QLCTGADKRLGKNASEVKAH 830
+ C D +E+KA
Sbjct: 247 K-CWAYDPSRRPRFTELKAQ 265
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 103/260 (39%), Gaps = 58/260 (22%)
Query: 574 EVTLVRKIDTNHLYVMKGS-PHNNLYFVMDYIPGGDLMSLL-IKKGIFEEPLARFYIAEL 631
E +R+ D H+ + G N ++ +M+ G+L S L ++K + Y +L
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 120
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
+ A+ + F+HRDI N+L+ + +KL DFGL R+ +S YY++
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS---RYMEDSTYYKA-------- 169
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
S+G P+K ++APE + +
Sbjct: 170 --------SKG---------KLPIK-----------------------WMAPESINFRRF 189
Query: 752 TQLCDWWSVGVILYEMLV-GSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLIL 810
T D W GV ++E+L+ G PF + + ++ N E +P P L+
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLYSLMT 246
Query: 811 QLCTGADKRLGKNASEVKAH 830
+ C D +E+KA
Sbjct: 247 K-CWAYDPSRRPRFTELKAQ 265
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 103/260 (39%), Gaps = 58/260 (22%)
Query: 574 EVTLVRKIDTNHLYVMKGS-PHNNLYFVMDYIPGGDLMSLL-IKKGIFEEPLARFYIAEL 631
E +R+ D H+ + G N ++ +M+ G+L S L ++K + Y +L
Sbjct: 63 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 122
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
+ A+ + F+HRDI N+L+ + +KL DFGL R+ +S YY++
Sbjct: 123 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS---RYMEDSTYYKA-------- 171
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
S+G P+K ++APE + +
Sbjct: 172 --------SKG---------KLPIK-----------------------WMAPESINFRRF 191
Query: 752 TQLCDWWSVGVILYEMLV-GSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLIL 810
T D W GV ++E+L+ G PF + + ++ N E +P P L+
Sbjct: 192 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLYSLMT 248
Query: 811 QLCTGADKRLGKNASEVKAH 830
+ C D +E+KA
Sbjct: 249 K-CWAYDPSRRPRFTELKAQ 267
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 103/260 (39%), Gaps = 58/260 (22%)
Query: 574 EVTLVRKIDTNHLYVMKGS-PHNNLYFVMDYIPGGDLMSLL-IKKGIFEEPLARFYIAEL 631
E +R+ D H+ + G N ++ +M+ G+L S L ++K + Y +L
Sbjct: 89 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 148
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
+ A+ + F+HRDI N+L+ + +KL DFGL R+ +S YY++
Sbjct: 149 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS---RYMEDSTYYKA-------- 197
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
S+G P+K ++APE + +
Sbjct: 198 --------SKG---------KLPIK-----------------------WMAPESINFRRF 217
Query: 752 TQLCDWWSVGVILYEMLV-GSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLIL 810
T D W GV ++E+L+ G PF + + ++ N E +P P L+
Sbjct: 218 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLYSLMT 274
Query: 811 QLCTGADKRLGKNASEVKAH 830
+ C D +E+KA
Sbjct: 275 K-CWAYDPSRRPRFTELKAQ 293
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 103/260 (39%), Gaps = 58/260 (22%)
Query: 574 EVTLVRKIDTNHLYVMKGS-PHNNLYFVMDYIPGGDLMSLL-IKKGIFEEPLARFYIAEL 631
E +R+ D H+ + G N ++ +M+ G+L S L ++K + Y +L
Sbjct: 64 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 123
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
+ A+ + F+HRDI N+L+ + +KL DFGL R+ +S YY++
Sbjct: 124 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS---RYMEDSTYYKA-------- 172
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
S+G P+K ++APE + +
Sbjct: 173 --------SKG---------KLPIK-----------------------WMAPESINFRRF 192
Query: 752 TQLCDWWSVGVILYEMLV-GSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLIL 810
T D W GV ++E+L+ G PF + + ++ N E +P P L+
Sbjct: 193 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLYSLMT 249
Query: 811 QLCTGADKRLGKNASEVKAH 830
+ C D +E+KA
Sbjct: 250 K-CWAYDPSRRPRFTELKAQ 268
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 103/260 (39%), Gaps = 58/260 (22%)
Query: 574 EVTLVRKIDTNHLYVMKGS-PHNNLYFVMDYIPGGDLMSLL-IKKGIFEEPLARFYIAEL 631
E +R+ D H+ + G N ++ +M+ G+L S L ++K + Y +L
Sbjct: 66 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKYSLDLASLILYAYQL 125
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
+ A+ + F+HRDI N+L+ + +KL DFGL R+ +S YY++
Sbjct: 126 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS---RYMEDSTYYKA-------- 174
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
S+G P+K ++APE + +
Sbjct: 175 --------SKG---------KLPIK-----------------------WMAPESINFRRF 194
Query: 752 TQLCDWWSVGVILYEMLV-GSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLIL 810
T D W GV ++E+L+ G PF + + ++ N E +P P L+
Sbjct: 195 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLYSLMT 251
Query: 811 QLCTGADKRLGKNASEVKAH 830
+ C D +E+KA
Sbjct: 252 K-CWAYDPSRRPRFTELKAQ 270
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 78/210 (37%), Gaps = 61/210 (29%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN----NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIA 629
E+ ++R + H+ KG + +L VM+Y+P G L L + I L F A
Sbjct: 66 EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLF--A 123
Query: 630 ELTC-AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHG 688
+ C + +H +IHR++ N+L+D D +K+ DFGL H + +GD
Sbjct: 124 QQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD-- 181
Query: 689 RQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLR 748
SP+ + APE L
Sbjct: 182 ------------------------SPV-----------------------FWYAPECLKE 194
Query: 749 TGYTQLCDWWSVGVILYEMLV-----GSPP 773
+ D WS GV LYE+L SPP
Sbjct: 195 YKFYYASDVWSFGVTLYELLTHCDSSQSPP 224
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 78/210 (37%), Gaps = 61/210 (29%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN----NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIA 629
E+ ++R + H+ KG + +L VM+Y+P G L L + I L F A
Sbjct: 66 EIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQLLLF--A 123
Query: 630 ELTC-AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHG 688
+ C + +H +IHR++ N+L+D D +K+ DFGL H + +GD
Sbjct: 124 QQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD-- 181
Query: 689 RQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLR 748
SP+ + APE L
Sbjct: 182 ------------------------SPV-----------------------FWYAPECLKE 194
Query: 749 TGYTQLCDWWSVGVILYEMLV-----GSPP 773
+ D WS GV LYE+L SPP
Sbjct: 195 YKFYYASDVWSFGVTLYELLTHCDSSQSPP 224
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/180 (24%), Positives = 73/180 (40%), Gaps = 52/180 (28%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y V D + DL LL + + + + +++ ++ ++ +H +HRD+KP N+LI
Sbjct: 120 DVYIVQDLMET-DLYKLLKSQQLSNDHIC-YFLYQILRGLKYIHSANVLHRDLKPSNLLI 177
Query: 656 DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL 715
+ +K+ DFGL ++ DH + + W
Sbjct: 178 NTTCDLKICDFGL---------ARIADPEHDHTGFLTEXVATRW---------------- 212
Query: 716 KPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPF 774
Y APE++L + GYT+ D WSVG IL EML P F
Sbjct: 213 ------------------------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 84/248 (33%), Gaps = 84/248 (33%)
Query: 617 GIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 676
G + + + ++ +L + H +HRD+KP N+LI+R+G +KL DFGL F
Sbjct: 96 GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLADFGLARAF---- 151
Query: 677 NSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVG 736
G P RC + +V
Sbjct: 152 -------------------------GIP----------------------VRCYSAEVV- 163
Query: 737 TPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI-------- 787
T Y P+VL Y+ D WS G I E+ + P + Q K I
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPT 223
Query: 788 --NWESCLHIP----------------AEAQLSPEGADLILQL--CTGADKRLGKNASEV 827
W S +P +L+ G DL+ L C + +A E
Sbjct: 224 EEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQR---ISAEEA 280
Query: 828 KAHPFFSN 835
HP+FS+
Sbjct: 281 LQHPYFSD 288
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 9/134 (6%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGS----PHNNLY 598
G FGEV ++ T +K + V E+ + + + + G+ P N++
Sbjct: 85 GSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIF 144
Query: 599 FVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD 658
M+ + GG L L+ + G E A +Y+ + +E +H +H D+K DN+L+ D
Sbjct: 145 --MELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSD 202
Query: 659 G-HIKLTDFG--LC 669
G L DFG LC
Sbjct: 203 GSRAALCDFGHALC 216
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 73/158 (46%), Gaps = 23/158 (14%)
Query: 542 VGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTL----------VRKIDT-NHLYVMK 590
+G+ G+V + T + +K + C A EV L VR +D +LY +
Sbjct: 28 LGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAGR 87
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKG--IFEEPLARFYIAELTCAVESVHKMGFIHRDI 648
L VM+ + GG+L S + +G F E A + + A++ +H + HRD+
Sbjct: 88 KC----LLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDV 143
Query: 649 KPDNILIDR---DGHIKLTDFGLCTGFRWTHNSKYYQS 683
KP+N+L + +KLTDFG + T KY +S
Sbjct: 144 KPENLLYTSKRPNAILKLTDFGFA---KETTGEKYDKS 178
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 15/27 (55%), Positives = 20/27 (74%)
Query: 751 YTQLCDWWSVGVILYEMLVGSPPFLAN 777
Y + CD WS+GVI+Y +L G PPF +N
Sbjct: 175 YDKSCDMWSLGVIMYILLCGYPPFYSN 201
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 9/134 (6%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGS----PHNNLY 598
G FGEV ++ T +K + V E+ + + + + G+ P N++
Sbjct: 83 GSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIF 142
Query: 599 FVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD 658
M+ + GG L L+ + G E A +Y+ + +E +H +H D+K DN+L+ D
Sbjct: 143 --MELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSD 200
Query: 659 G-HIKLTDFG--LC 669
G L DFG LC
Sbjct: 201 GSRAALCDFGHALC 214
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 62/134 (46%), Gaps = 9/134 (6%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGS----PHNNLY 598
G FGEV ++ T +K + V E+ + + + + G+ P N++
Sbjct: 69 GSFGEVHRMKDKQTGFQCAVKKVRLEVFRVEELVACAGLSSPRIVPLYGAVREGPWVNIF 128
Query: 599 FVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD 658
M+ + GG L L+ + G E A +Y+ + +E +H +H D+K DN+L+ D
Sbjct: 129 --MELLEGGSLGQLIKQMGCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNVLLSSD 186
Query: 659 G-HIKLTDFG--LC 669
G L DFG LC
Sbjct: 187 GSRAALCDFGHALC 200
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 102/260 (39%), Gaps = 58/260 (22%)
Query: 574 EVTLVRKIDTNHLYVMKGS-PHNNLYFVMDYIPGGDLMSLL-IKKGIFEEPLARFYIAEL 631
E +R+ D H+ + G N ++ +M+ G+L S L ++K + Y +L
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQL 120
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
+ A+ + F+HRDI N+L+ +KL DFGL R+ +S YY++
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS---RYMEDSTYYKA-------- 169
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
S+G P+K ++APE + +
Sbjct: 170 --------SKG---------KLPIK-----------------------WMAPESINFRRF 189
Query: 752 TQLCDWWSVGVILYEMLV-GSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLIL 810
T D W GV ++E+L+ G PF + + ++ N E +P P L+
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLYSLMT 246
Query: 811 QLCTGADKRLGKNASEVKAH 830
+ C D +E+KA
Sbjct: 247 K-CWAYDPSRRPRFTELKAQ 265
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 9/94 (9%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y VM+ + +S +I+ + E ++ + + ++ C ++ +H G IHRD+KP NI++
Sbjct: 103 DVYIVMELMDAN--LSQVIQMELDHERMS-YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 656 DRDGHIKLTDFGLC----TGFRWTHN--SKYYQS 683
D +K+ DFGL T F T ++YY++
Sbjct: 160 KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI 787
V T Y APEV+L GY + D WSVG I+ EM+ G F + KVI
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI 238
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/260 (22%), Positives = 102/260 (39%), Gaps = 58/260 (22%)
Query: 574 EVTLVRKIDTNHLYVMKGS-PHNNLYFVMDYIPGGDLMSLL-IKKGIFEEPLARFYIAEL 631
E +R+ D H+ + G N ++ +M+ G+L S L ++K + Y +L
Sbjct: 441 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQL 500
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
+ A+ + F+HRDI N+L+ +KL DFGL R+ +S YY++
Sbjct: 501 STALAYLESKRFVHRDIAARNVLVSATDCVKLGDFGLS---RYMEDSTYYKA-------- 549
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGY 751
S+G P+K ++APE + +
Sbjct: 550 --------SKG---------KLPIK-----------------------WMAPESINFRRF 569
Query: 752 TQLCDWWSVGVILYEMLV-GSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLIL 810
T D W GV ++E+L+ G PF + + ++ N E +P P L+
Sbjct: 570 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGE---RLPMPPNCPPTLYSLMT 626
Query: 811 QLCTGADKRLGKNASEVKAH 830
+ C D +E+KA
Sbjct: 627 K-CWAYDPSRRPRFTELKAQ 645
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 52/180 (28%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y V D + DL LL + + + + +++ ++ ++ +H +HRD+KP N+L+
Sbjct: 102 DVYIVQDLMET-DLYKLLKTQHLSNDHIC-YFLYQILRGLKYIHSANVLHRDLKPSNLLL 159
Query: 656 DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL 715
+ +K+ DFGL ++ + DH + + W
Sbjct: 160 NTTSDLKICDFGL---------ARVADPDHDHTGFLTEYVATRW---------------- 194
Query: 716 KPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPF 774
Y APE++L + GYT+ D WSVG IL EML P F
Sbjct: 195 ------------------------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 9/94 (9%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y VM+ + +S +I+ + E ++ + + ++ C ++ +H G IHRD+KP NI++
Sbjct: 103 DVYIVMELMDAN--LSQVIQMELDHERMS-YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 656 DRDGHIKLTDFGLC----TGFRWTHN--SKYYQS 683
D +K+ DFGL T F T ++YY++
Sbjct: 160 KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI 787
V T Y APEV+L GY + D WSVG I+ EM+ G F + KVI
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI 238
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/187 (25%), Positives = 70/187 (37%), Gaps = 51/187 (27%)
Query: 591 GSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKP 650
G LY I G DL + L ++G P A + ++ A+++ H G HRD+KP
Sbjct: 103 GEIDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKP 162
Query: 651 DNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRC 710
+NIL+ D L DFG+ + T + K Q
Sbjct: 163 ENILVSADDFAYLVDFGIASA---TTDEKLTQLG-------------------------- 193
Query: 711 INSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVG 770
+ VGT Y APE + T D +++ +LYE L G
Sbjct: 194 ----------------------NTVGTLYYXAPERFSESHATYRADIYALTCVLYECLTG 231
Query: 771 SPPFLAN 777
SPP+ +
Sbjct: 232 SPPYQGD 238
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 81/221 (36%), Gaps = 60/221 (27%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGI-FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
+ +++++ GG+L + + E Y+ + ++ +H+ +H DIKP+NI+
Sbjct: 123 MVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMC 182
Query: 656 D--RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
+ + +K+ DFGL T + P E
Sbjct: 183 ETKKASSVKIIDFGLAT---------------------KLNPDE---------------- 205
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPP 773
+ T + APE++ R D W++GV+ Y +L G P
Sbjct: 206 ----------------IVKVTTATAEFAAPEIVDREPVGFYTDMWAIGVLGYVLLSGLSP 249
Query: 774 FLANTSAET--QYKVINWESCLHIPAEAQLSPEGADLILQL 812
F ET K +WE A + +SPE D I L
Sbjct: 250 FAGEDDLETLQNVKRCDWE--FDEDAFSSVSPEAKDFIKNL 288
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 79/326 (24%), Positives = 125/326 (38%), Gaps = 87/326 (26%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVG------------AFGEVTLVRKID-TNHLYVM 589
G F V R +TN + +K I +G A E+ L++++ N + ++
Sbjct: 21 GQFATVYKARDKNTNQIVAIKKIK--LGHRSEAKDGINRTALREIKLLQELSHPNIIGLL 78
Query: 590 KGSPH-NNLYFVMDYIPGGDLMSLLIKKGIFEEPL-ARFYIAELTCAVESVHKMGFIHRD 647
H +N+ V D++ DL ++ + P + Y+ +E +H+ +HRD
Sbjct: 79 DAFGHKSNISLVFDFMET-DLEVIIKDNSLVLTPSHIKAYMLMTLQGLEYLHQHWILHRD 137
Query: 648 IKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
+KP+N+L+D +G +KL DFGL F G+P
Sbjct: 138 LKPNNLLLDENGVLKLADFGLAKSF-----------------------------GSP--- 165
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYE 766
R H +V T Y APE+L Y D W+VG IL E
Sbjct: 166 -------------------NRAYXHQVV-TRWYRAPELLFGARMYGVGVDMWAVGCILAE 205
Query: 767 MLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASE 826
+L+ PFL S Q I +E+ L P E Q +C+ D K+
Sbjct: 206 LLL-RVPFLPGDSDLDQLTRI-FET-LGTPTEEQWP--------DMCSLPDYVTFKSFPG 254
Query: 827 VKAHPFFSN-----VDFEKGVRTLTP 847
+ H FS +D +G+ P
Sbjct: 255 IPLHHIFSAAGDDLLDLIQGLFLFNP 280
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 51.2 bits (121), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
+ Y VM ++ G DL L+ + + E+ + +F + ++ + +H G IHRD+KP N+
Sbjct: 103 TDFYLVMPFM-GTDLGKLMKHEKLGEDRI-QFLVYQMLKGLRYIHAAGIIHRDLKPGNLA 160
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 161 VNEDCELKILDFGLA 175
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 22/36 (61%), Gaps = 1/36 (2%)
Query: 740 YIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF 774
Y APEV+L YTQ D WSVG I+ EM+ G F
Sbjct: 191 YRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLF 226
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 52/180 (28%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y V D + DL LL + + + + +++ ++ ++ +H +HRD+KP N+L+
Sbjct: 100 DVYIVQDLM-ETDLYKLLKTQHLSNDHIC-YFLYQILRGLKYIHSANVLHRDLKPSNLLL 157
Query: 656 DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL 715
+ +K+ DFGL ++ + DH + + W
Sbjct: 158 NTTXDLKICDFGL---------ARVADPDHDHTGFLTEYVATRW---------------- 192
Query: 716 KPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPF 774
Y APE++L + GYT+ D WSVG IL EML P F
Sbjct: 193 ------------------------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 52/180 (28%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y V D + DL LL + + + + +++ ++ ++ +H +HRD+KP N+L+
Sbjct: 100 DVYIVQDLM-ETDLYKLLKTQHLSNDHIC-YFLYQILRGLKYIHSANVLHRDLKPSNLLL 157
Query: 656 DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL 715
+ +K+ DFGL ++ + DH + + W
Sbjct: 158 NTTCDLKICDFGL---------ARVADPDHDHTGFLTEYVATRW---------------- 192
Query: 716 KPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPF 774
Y APE++L + GYT+ D WSVG IL EML P F
Sbjct: 193 ------------------------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 52/180 (28%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y V D + DL LL + + + + +++ ++ ++ +H +HRD+KP N+L+
Sbjct: 100 DVYIVQDLM-ETDLYKLLKTQHLSNDHIC-YFLYQILRGLKYIHSANVLHRDLKPSNLLL 157
Query: 656 DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL 715
+ +K+ DFGL ++ + DH + + W
Sbjct: 158 NTTXDLKICDFGL---------ARVADPDHDHTGFLTEYVATRW---------------- 192
Query: 716 KPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPF 774
Y APE++L + GYT+ D WSVG IL EML P F
Sbjct: 193 ------------------------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 52/180 (28%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y V D + DL LL + + + + +++ ++ ++ +H +HRD+KP N+L+
Sbjct: 100 DVYIVQDLM-ETDLYKLLKTQHLSNDHIC-YFLYQILRGLKYIHSANVLHRDLKPSNLLL 157
Query: 656 DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL 715
+ +K+ DFGL ++ + DH + + W
Sbjct: 158 NTTXDLKIXDFGL---------ARVADPDHDHTGFLTEYVATRW---------------- 192
Query: 716 KPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPF 774
Y APE++L + GYT+ D WSVG IL EML P F
Sbjct: 193 ------------------------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 52/180 (28%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y V D + DL LL + + + + +++ ++ ++ +H +HRD+KP N+L+
Sbjct: 102 DVYIVQDLMET-DLYKLLKTQHLSNDHIC-YFLYQILRGLKYIHSANVLHRDLKPSNLLL 159
Query: 656 DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL 715
+ +K+ DFGL ++ + DH + + W
Sbjct: 160 NTTCDLKICDFGL---------ARVADPDHDHTGFLTEYVATRW---------------- 194
Query: 716 KPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPF 774
Y APE++L + GYT+ D WSVG IL EML P F
Sbjct: 195 ------------------------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 52/180 (28%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y V D + DL LL + + + + +++ ++ ++ +H +HRD+KP N+L+
Sbjct: 104 DVYIVQDLMET-DLYKLLKTQHLSNDHIC-YFLYQILRGLKYIHSANVLHRDLKPSNLLL 161
Query: 656 DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL 715
+ +K+ DFGL ++ + DH + + W
Sbjct: 162 NTTXDLKICDFGL---------ARVADPDHDHTGFLTEYVATRW---------------- 196
Query: 716 KPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPF 774
Y APE++L + GYT+ D WSVG IL EML P F
Sbjct: 197 ------------------------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 52/180 (28%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y V D + DL LL + + + + +++ ++ ++ +H +HRD+KP N+L+
Sbjct: 104 DVYIVQDLMET-DLYKLLKTQHLSNDHIC-YFLYQILRGLKYIHSANVLHRDLKPSNLLL 161
Query: 656 DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL 715
+ +K+ DFGL ++ + DH + + W
Sbjct: 162 NTTXDLKICDFGL---------ARVADPDHDHTGFLTEYVATRW---------------- 196
Query: 716 KPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPF 774
Y APE++L + GYT+ D WSVG IL EML P F
Sbjct: 197 ------------------------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 52/180 (28%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y V D + DL LL + + + + +++ ++ ++ +H +HRD+KP N+L+
Sbjct: 102 DVYIVQDLMET-DLYKLLKTQHLSNDHIC-YFLYQILRGLKYIHSANVLHRDLKPSNLLL 159
Query: 656 DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL 715
+ +K+ DFGL ++ + DH + + W
Sbjct: 160 NTTCDLKICDFGL---------ARVADPDHDHTGFLTEYVATRW---------------- 194
Query: 716 KPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPF 774
Y APE++L + GYT+ D WSVG IL EML P F
Sbjct: 195 ------------------------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 230
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/300 (22%), Positives = 99/300 (33%), Gaps = 98/300 (32%)
Query: 573 GEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELT 632
G +++ IDT +K V +YI D L I + RFY+ EL
Sbjct: 91 GGTNIIKLIDT-----VKDPVSKTPALVFEYINNTDFKQLY---QILTDFDIRFYMYELL 142
Query: 633 CAVESVHKMGFIHRDIKPDNILID-RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQD 691
A++ H G +HRD+KP N++ID + ++L D+GL +
Sbjct: 143 KALDYCHSKGIMHRDVKPHNVMIDHQQKKLRLIDWGLAEFYH------------------ 184
Query: 692 SMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG- 750
P QE V + + PE+L+
Sbjct: 185 ------------PAQEYNV-----------------------RVASRYFKGPELLVDYQM 209
Query: 751 YTQLCDWWSVGVILYEMLVGSPPFLANTSAETQY----KVIN------------------ 788
Y D WS+G +L M+ PF Q KV+
Sbjct: 210 YDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPH 269
Query: 789 ------------WESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPFFSNV 836
WE+ +H +SPE DL+ +L D + A E HP+F V
Sbjct: 270 FNDILGQHSRKRWENFIHSENRHLVSPEALDLLDKLLR-YDHQQRLTAKEAMEHPYFYPV 328
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 49/86 (56%), Gaps = 11/86 (12%)
Query: 599 FVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD 658
+++ + G DL +++ + + +E + +F + +L ++ +H G IHRD+KP N+ ++ D
Sbjct: 109 YLVTTLMGADLNNIVKSQALSDEHV-QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNED 167
Query: 659 GHIKLTDFGLC-------TGF---RW 674
+++ DFGL TG+ RW
Sbjct: 168 SELRILDFGLARQADEEMTGYVATRW 193
Score = 36.2 bits (82), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 35/132 (26%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVG----------------------- 770
V T Y APE++L Y Q D WSVG I+ E+L G
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTP 248
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLS------PEGADLILQ-LCTGADKRLGKN 823
SP LA S+E I +S +P + S P DL+ + L +D+R+ +
Sbjct: 249 SPEVLAKISSEHARTYI--QSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRV--S 304
Query: 824 ASEVKAHPFFSN 835
A+E AH +FS
Sbjct: 305 AAEALAHAYFSQ 316
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 52/180 (28%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y V D + DL LL + + + + +++ ++ ++ +H +HRD+KP N+L+
Sbjct: 98 DVYIVQDLMET-DLYKLLKTQHLSNDHIC-YFLYQILRGLKYIHSANVLHRDLKPSNLLL 155
Query: 656 DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL 715
+ +K+ DFGL ++ + DH + + W
Sbjct: 156 NTTCDLKICDFGL---------ARVADPDHDHTGFLTEYVATRW---------------- 190
Query: 716 KPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPF 774
Y APE++L + GYT+ D WSVG IL EML P F
Sbjct: 191 ------------------------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 52/180 (28%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y V D + DL LL + + + + +++ ++ ++ +H +HRD+KP N+L+
Sbjct: 105 DVYIVQDLMET-DLYKLLKTQHLSNDHIC-YFLYQILRGLKYIHSANVLHRDLKPSNLLL 162
Query: 656 DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL 715
+ +K+ DFGL ++ + DH + + W
Sbjct: 163 NTTCDLKICDFGL---------ARVADPDHDHTGFLTEYVATRW---------------- 197
Query: 716 KPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPF 774
Y APE++L + GYT+ D WSVG IL EML P F
Sbjct: 198 ------------------------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 52/180 (28%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y V D + DL LL + + + + +++ ++ ++ +H +HRD+KP N+L+
Sbjct: 106 DVYIVQDLMET-DLYKLLKTQHLSNDHIC-YFLYQILRGLKYIHSANVLHRDLKPSNLLL 163
Query: 656 DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL 715
+ +K+ DFGL ++ + DH + + W
Sbjct: 164 NTTCDLKICDFGL---------ARVADPDHDHTGFLTEYVATRW---------------- 198
Query: 716 KPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPF 774
Y APE++L + GYT+ D WSVG IL EML P F
Sbjct: 199 ------------------------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 234
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 52/180 (28%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y V D + DL LL + + + + +++ ++ ++ +H +HRD+KP N+L+
Sbjct: 97 DVYIVQDLMET-DLYKLLKTQHLSNDHIC-YFLYQILRGLKYIHSANVLHRDLKPSNLLL 154
Query: 656 DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL 715
+ +K+ DFGL ++ + DH + + W
Sbjct: 155 NTTCDLKICDFGL---------ARVADPDHDHTGFLTEYVATRW---------------- 189
Query: 716 KPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPF 774
Y APE++L + GYT+ D WSVG IL EML P F
Sbjct: 190 ------------------------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 225
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 52/180 (28%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y V D + DL LL + + + + +++ ++ ++ +H +HRD+KP N+L+
Sbjct: 104 DVYIVQDLMET-DLYKLLKTQHLSNDHIC-YFLYQILRGLKYIHSANVLHRDLKPSNLLL 161
Query: 656 DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL 715
+ +K+ DFGL ++ + DH + + W
Sbjct: 162 NTTCDLKICDFGL---------ARVADPDHDHTGFLTEYVATRW---------------- 196
Query: 716 KPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPF 774
Y APE++L + GYT+ D WSVG IL EML P F
Sbjct: 197 ------------------------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 52/180 (28%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y V D + DL LL + + + + +++ ++ ++ +H +HRD+KP N+L+
Sbjct: 104 DVYIVQDLMET-DLYKLLKTQHLSNDHIC-YFLYQILRGLKYIHSANVLHRDLKPSNLLL 161
Query: 656 DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL 715
+ +K+ DFGL ++ + DH + + W
Sbjct: 162 NTTCDLKICDFGL---------ARVADPDHDHTGFLTEYVATRW---------------- 196
Query: 716 KPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPF 774
Y APE++L + GYT+ D WSVG IL EML P F
Sbjct: 197 ------------------------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 52/180 (28%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y V D + DL LL + + + + +++ ++ ++ +H +HRD+KP N+L+
Sbjct: 98 DVYIVQDLMET-DLYKLLKTQHLSNDHIC-YFLYQILRGLKYIHSANVLHRDLKPSNLLL 155
Query: 656 DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL 715
+ +K+ DFGL ++ + DH + + W
Sbjct: 156 NTTCDLKICDFGL---------ARVADPDHDHTGFLTEYVATRW---------------- 190
Query: 716 KPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPF 774
Y APE++L + GYT+ D WSVG IL EML P F
Sbjct: 191 ------------------------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 226
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 52/180 (28%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y V D + DL LL + + + + +++ ++ ++ +H +HRD+KP N+L+
Sbjct: 120 DVYIVQDLMET-DLYKLLKTQHLSNDHIC-YFLYQILRGLKYIHSANVLHRDLKPSNLLL 177
Query: 656 DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL 715
+ +K+ DFGL ++ + DH + + W
Sbjct: 178 NTTCDLKICDFGL---------ARVADPDHDHTGFLTEYVATRW---------------- 212
Query: 716 KPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPF 774
Y APE++L + GYT+ D WSVG IL EML P F
Sbjct: 213 ------------------------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 248
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 52/180 (28%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y V D + DL LL + + + + +++ ++ ++ +H +HRD+KP N+L+
Sbjct: 108 DVYIVQDLMET-DLYKLLKTQHLSNDHIC-YFLYQILRGLKYIHSANVLHRDLKPSNLLL 165
Query: 656 DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL 715
+ +K+ DFGL ++ + DH + + W
Sbjct: 166 NTTCDLKICDFGL---------ARVADPDHDHTGFLTEYVATRW---------------- 200
Query: 716 KPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPF 774
Y APE++L + GYT+ D WSVG IL EML P F
Sbjct: 201 ------------------------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 236
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 52/180 (28%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y V D + DL LL + + + + +++ ++ ++ +H +HRD+KP N+L+
Sbjct: 100 DVYIVQDLMET-DLYKLLKTQHLSNDHIC-YFLYQILRGLKYIHSANVLHRDLKPSNLLL 157
Query: 656 DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL 715
+ +K+ DFGL ++ + DH + + W
Sbjct: 158 NTTCDLKICDFGL---------ARVADPDHDHTGFLTEYVATRW---------------- 192
Query: 716 KPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPF 774
Y APE++L + GYT+ D WSVG IL EML P F
Sbjct: 193 ------------------------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 228
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/274 (22%), Positives = 90/274 (32%), Gaps = 93/274 (33%)
Query: 599 FVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILID-R 657
V +YI D L I + RFY+ EL A++ H G +HRD+KP N++ID +
Sbjct: 117 LVFEYINNTDFKQLY---QILTDFDIRFYMYELLKALDYCHSKGIMHRDVKPHNVMIDHQ 173
Query: 658 DGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKP 717
++L D+GL + P QE
Sbjct: 174 QKKLRLIDWGLAEFYH------------------------------PAQEYNV------- 196
Query: 718 LXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLA 776
V + + PE+L+ Y D WS+G +L M+ PF
Sbjct: 197 ----------------RVASRYFKGPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFH 240
Query: 777 NTSAETQY----KVIN------------------------------WESCLHIPAEAQLS 802
Q KV+ WE+ +H +S
Sbjct: 241 GQDNYDQLVRIAKVLGTEELYGYLKKYHIDLDPHFNDILGQHSRKRWENFIHSENRHLVS 300
Query: 803 PEGADLILQLCTGADKRLGKNASEVKAHPFFSNV 836
PE DL+ +L D + A E HP+F V
Sbjct: 301 PEALDLLDKLLR-YDHQQRLTAKEAMEHPYFYPV 333
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 50.4 bits (119), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/238 (23%), Positives = 92/238 (38%), Gaps = 66/238 (27%)
Query: 584 NHLYVMKGSPHNNLYF--VMDYIPGGDLMSLLIK----KGIFEEP-LARFYIAELTCAVE 636
++ Y + ++Y VM+Y+P D + + + + P L + ++ +L ++
Sbjct: 86 SYFYTLGERDRRDIYLNVVMEYVP--DTLHRCCRNYYRRQVAPPPILIKVFLFQLIRSIG 143
Query: 637 SVH--KMGFIHRDIKPDNILIDR-DGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSM 693
+H + HRDIKP N+L++ DG +KL DF G +
Sbjct: 144 CLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDF---------------------GSAKKL 182
Query: 694 EPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-RTGYT 752
PSE P C + Y APE++ YT
Sbjct: 183 SPSE------PNVAYIC--------------------------SRYYRAPELIFGNQHYT 210
Query: 753 QLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLIL 810
D WSVG I EM++G P F + SA ++++ C +L+P D+ L
Sbjct: 211 TAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSREVLRKLNPSHTDVDL 268
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 64/165 (38%), Gaps = 60/165 (36%)
Query: 613 LIKKGIFEE---PLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH--IKLTDFG 667
LIKK F+ PL R + + ++++HK IH D+KP+NIL+ + G IK+ DF
Sbjct: 188 LIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDF- 246
Query: 668 LCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQ 727
G C HQ
Sbjct: 247 -------------------------------------GSSC---------------YEHQ 254
Query: 728 RCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
R ++ + + Y APEV+L Y D WS+G IL E+L G P
Sbjct: 255 R--VYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYP 297
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 52/180 (28%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y V D + DL LL + + + + +++ ++ ++ +H +HRD+KP N+L+
Sbjct: 104 DVYIVQDLMET-DLYKLLKTQHLSNDHIC-YFLYQILRGLKYIHSANVLHRDLKPSNLLL 161
Query: 656 DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL 715
+ +K+ DFGL ++ + DH + W
Sbjct: 162 NTTCDLKICDFGL---------ARVADPDHDHTGFLXEXVATRW---------------- 196
Query: 716 KPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPF 774
Y APE++L + GYT+ D WSVG IL EML P F
Sbjct: 197 ------------------------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 73/180 (40%), Gaps = 52/180 (28%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y V D + DL LL + + + + +++ ++ ++ +H +HRD+KP N+L+
Sbjct: 105 DVYIVQDLMET-DLYKLLKTQHLSNDHIC-YFLYQILRGLKYIHSANVLHRDLKPSNLLL 162
Query: 656 DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL 715
+ +K+ DFGL ++ + DH + W
Sbjct: 163 NTTCDLKICDFGL---------ARVADPDHDHTGFLXEXVATRW---------------- 197
Query: 716 KPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPF 774
Y APE++L + GYT+ D WSVG IL EML P F
Sbjct: 198 ------------------------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 233
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 50.4 bits (119), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 64/165 (38%), Gaps = 60/165 (36%)
Query: 613 LIKKGIFEE---PLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH--IKLTDFG 667
LIKK F+ PL R + + ++++HK IH D+KP+NIL+ + G IK+ DF
Sbjct: 188 LIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDF- 246
Query: 668 LCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQ 727
G C HQ
Sbjct: 247 -------------------------------------GSSC---------------YEHQ 254
Query: 728 RCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
R ++ + + Y APEV+L Y D WS+G IL E+L G P
Sbjct: 255 R--VYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYP 297
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.1 bits (118), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 54/94 (57%), Gaps = 9/94 (9%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y VM+ + +S +I+ + E ++ + + ++ C ++ +H G IHRD+KP NI++
Sbjct: 103 DVYIVMELMDAN--LSQVIQMELDHERMS-YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 656 DRDGHIKLTDFGLC----TGFRWTHN--SKYYQS 683
D +K+ DFGL T F T ++YY++
Sbjct: 160 KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI 787
V T Y APEV+L GY + D WSVG I+ EM+ G F + KVI
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI 238
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 93/252 (36%), Gaps = 78/252 (30%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHK---MGFIHRDIKPDN 652
NL VM++ GG L +L K I + L + + ++ + +H + IHRD+K N
Sbjct: 80 NLCLVMEFARGGPLNRVLSGKRIPPDILVNWAV-QIARGMNYLHDEAIVPIIHRDLKSSN 138
Query: 653 ILI-------DRDGHI-KLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTP 704
ILI D I K+TDFGL + EW
Sbjct: 139 ILILQKVENGDLSNKILKITDFGL---------------------------AREW----- 166
Query: 705 GQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 764
R S G ++APEV+ + +++ D WS GV+L
Sbjct: 167 ----------------------HRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLL 204
Query: 765 YEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNA 824
+E+L G PF Y V + L IP+ PE +++ C D
Sbjct: 205 WELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTC---PEPFAKLMEDCWNPDPH----- 256
Query: 825 SEVKAHPFFSNV 836
+ P F+N+
Sbjct: 257 ----SRPSFTNI 264
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 50.1 bits (118), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 74/180 (41%), Gaps = 52/180 (28%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y V D + DL LL + + + + +++ ++ ++ +H +HRD+KP N+L+
Sbjct: 104 DVYIVQDLMET-DLYKLLKCQHLSNDHIC-YFLYQILRGLKYIHSANVLHRDLKPSNLLL 161
Query: 656 DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL 715
+ +K+ DFGL ++ + DH + + W
Sbjct: 162 NTTCDLKICDFGL---------ARVADPDHDHTGFLTEYVATRW---------------- 196
Query: 716 KPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPF 774
Y APE++L + GYT+ D WSVG IL EML P F
Sbjct: 197 ------------------------YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF 232
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 96/252 (38%), Gaps = 44/252 (17%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYK----CVGAFGEVTLVRKIDTNHLYVMKGSPHNNLY 598
G FG V L + ID Y +K + A E +++KI + + ++ +
Sbjct: 46 GTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKF 105
Query: 599 FVMDYI-----PGGDLMSLLIKK----GIFEEPLARFYIAELTCAVESVHKMGFIHRDIK 649
D++ P G + +I + G E + + Y E+ A+ + KM H D+K
Sbjct: 106 MYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDI-KLYCIEILKALNYLRKMSLTHTDLK 164
Query: 650 PDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECR 709
P+NIL+D D + S+ + G Q R
Sbjct: 165 PENILLD-----------------------------DPYFEKSLITVRRVTDGKKIQIYR 195
Query: 710 CINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLV 769
++ +K L + S++ T Y APEV+L G+ D WS G +L E+
Sbjct: 196 TKSTGIK-LIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYT 254
Query: 770 GSPPFLANTSAE 781
GS F + E
Sbjct: 255 GSLLFRTHEHME 266
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 444 KRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI 484
K+ + + F+ I+ +G G FG V L + ID YA+K +
Sbjct: 28 KKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVV 68
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 49.7 bits (117), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/282 (22%), Positives = 103/282 (36%), Gaps = 68/282 (24%)
Query: 500 IDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHL 559
ID H ++ + + G F V LV + H Y +K I C R+ D + L
Sbjct: 26 IDNKHYLFIQKLGE--GGFSYVDLVEGLHDGHFYALKRIL-CHEQQDREEAQREADMHRL 82
Query: 560 YVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDL---MSLLIKK 616
+ I + V +R+ +G+ H + ++ + G L + L K
Sbjct: 83 FNHPNILRLV-----AYCLRE---------RGAKHEA-WLLLPFFKRGTLWNEIERLKDK 127
Query: 617 GIF-EEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWT 675
G F E + + + +E++H G+ HRD+KP NIL+ +G L D
Sbjct: 128 GNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDL--------- 178
Query: 676 HNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLV 735
G+ Q C + + L QRC
Sbjct: 179 --------------------------GSMNQACIHVEGSRQALTLQDWAA-QRC------ 205
Query: 736 GTPNYIAPEVLLRTGYT---QLCDWWSVGVILYEMLVGSPPF 774
T +Y APE+ + + D WS+G +LY M+ G P+
Sbjct: 206 -TISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPY 246
Score = 33.1 bits (74), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/81 (25%), Positives = 35/81 (43%), Gaps = 1/81 (1%)
Query: 436 KESNYIRLKRAKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFGEVT 495
+E+ Y + +D ++ I+ +G G F V LV + H YA+K I C
Sbjct: 14 RENLYFQGHMVIIDNKHYLFIQKLGEGGFSYVDLVEGLHDGHFYALKRIL-CHEQQDREE 72
Query: 496 LVRKIDTNHLYVMKTIYKCVG 516
R+ D + L+ I + V
Sbjct: 73 AQREADMHRLFNHPNILRLVA 93
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 63/165 (38%), Gaps = 60/165 (36%)
Query: 613 LIKKGIFEE---PLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH--IKLTDFG 667
LIKK F+ PL R + + ++++HK IH D+KP+NIL+ + G IK+ DF
Sbjct: 188 LIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDF- 246
Query: 668 LCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQ 727
G C HQ
Sbjct: 247 -------------------------------------GSSC---------------YEHQ 254
Query: 728 RCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
R + + + Y APEV+L Y D WS+G IL E+L G P
Sbjct: 255 R--VYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYP 297
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 626 FYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC----TGFRWTHN--SK 679
+ + ++ C ++ +H G IHRD+KP NI++ D +K+ DFGL T F T ++
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTR 189
Query: 680 YYQS 683
YY++
Sbjct: 190 YYRA 193
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 31/65 (47%), Gaps = 5/65 (7%)
Query: 728 RCLAHSLVGTPN-----YIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAET 782
R S + TP Y APEV+L GY + D WSVG I+ EM+ G F +
Sbjct: 174 RTAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQ 233
Query: 783 QYKVI 787
KVI
Sbjct: 234 WNKVI 238
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 49.7 bits (117), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/248 (22%), Positives = 83/248 (33%), Gaps = 84/248 (33%)
Query: 617 GIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTH 676
G + + + ++ +L + H +HRD+KP N+LI+R+G +KL +FGL F
Sbjct: 96 GDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAF---- 151
Query: 677 NSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVG 736
G P RC + +V
Sbjct: 152 -------------------------GIP----------------------VRCYSAEVV- 163
Query: 737 TPNYIAPEVLLRTG-YTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI-------- 787
T Y P+VL Y+ D WS G I E+ P + Q K I
Sbjct: 164 TLWYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPT 223
Query: 788 --NWESCLHIP----------------AEAQLSPEGADLILQL--CTGADKRLGKNASEV 827
W S +P +L+ G DL+ L C + +A E
Sbjct: 224 EEQWPSMTKLPDYKPYPMYPATTSLVNVVPKLNATGRDLLQNLLKCNPVQR---ISAEEA 280
Query: 828 KAHPFFSN 835
HP+FS+
Sbjct: 281 LQHPYFSD 288
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 56/254 (22%), Positives = 102/254 (40%), Gaps = 67/254 (26%)
Query: 546 GEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKG----SPHNNLYFVM 601
GEV V+K+ + ++ + E+ +++ + +++ KG + NL +M
Sbjct: 40 GEVVAVKKLQHSTEEHLRDFER------EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 93
Query: 602 DYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH 660
+Y+P G L L K K + Y +++ +E + +IHR++ NIL++ +
Sbjct: 94 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRNLATRNILVENENR 153
Query: 661 IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXX 720
+K+ DFGL + +YY+ EP E SP+
Sbjct: 154 VKIGDFGLTKVL--PQDKEYYKVK---------EPGE---------------SPI----- 182
Query: 721 XXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLV-----GSPP-- 773
+ APE L + ++ D WS GV+LYE+ SPP
Sbjct: 183 ------------------FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE 224
Query: 774 FLANTSAETQYKVI 787
F+ + Q ++I
Sbjct: 225 FMRMIGNDKQGQMI 238
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 92/268 (34%), Gaps = 81/268 (30%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIY--------KCVGAFGEVTLVRKIDTNHLYVMKGS-- 592
G FG V R + + + +K + K EV ++K+ + +G
Sbjct: 26 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL 85
Query: 593 PHNNLYFVMDYIPGG--DLMSLLIKKGIFEEPLARFYIAELT----CAVESVHKMGFIHR 646
+ + VM+Y G DL+ + ++PL IA +T + +H IHR
Sbjct: 86 REHTAWLVMEYCLGSASDLLE------VHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 139
Query: 647 DIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQ 706
D+K NIL+ G +KL DF G M P
Sbjct: 140 DVKAGNILLSEPGLVKLGDF---------------------GSASIMAP----------- 167
Query: 707 ECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL---RTGYTQLCDWWSVGVI 763
A+ VGTP ++APEV+L Y D WS+G+
Sbjct: 168 ------------------------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 203
Query: 764 LYEMLVGSPPFLANTSAETQYKVINWES 791
E+ PP + Y + ES
Sbjct: 204 CIELAERKPPLFNMNAMSALYHIAQNES 231
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 80/202 (39%), Gaps = 53/202 (26%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V +Y+ DL ++L + + EE AR ++ +L ++ +H +HRD+KP N+
Sbjct: 95 NSVYIVQEYMET-DLANVLEQGPLLEEH-ARLFMYQLLRGLKYIHSANVLHRDLKPANLF 152
Query: 655 ID-RDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINS 713
I+ D +K+ DFGL M+P
Sbjct: 153 INTEDLVLKIGDFGLAR---------------------IMDPH----------------- 174
Query: 714 PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSP 772
H+ L+ LV T Y +P +LL YT+ D W+ G I EML G
Sbjct: 175 ----------YSHKGHLSEGLV-TKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKT 223
Query: 773 PFLANTSAETQYKVINWESCLH 794
F E ++ +H
Sbjct: 224 LFAGAHELEQMQLILESIPVVH 245
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 49.3 bits (116), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 49/86 (56%), Gaps = 11/86 (12%)
Query: 599 FVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD 658
+++ + G DL +++ + + +E + +F + +L ++ +H G IHRD+KP N+ ++ D
Sbjct: 109 YLVTTLMGADLNNIVKCQALSDEHV-QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNED 167
Query: 659 GHIKLTDFGLC-------TGF---RW 674
+++ DFGL TG+ RW
Sbjct: 168 SELRILDFGLARQADEEMTGYVATRW 193
Score = 35.8 bits (81), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 35/132 (26%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVG----------------------- 770
V T Y APE++L Y Q D WSVG I+ E+L G
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTP 248
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLS------PEGADLILQ-LCTGADKRLGKN 823
SP LA S+E I +S +P + S P DL+ + L +D+R+ +
Sbjct: 249 SPEVLAKISSEHARTYI--QSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRV--S 304
Query: 824 ASEVKAHPFFSN 835
A+E AH +FS
Sbjct: 305 AAEALAHAYFSQ 316
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 733 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAE 781
+LV T +Y APEV+L G++Q CD WS+G IL E +G F + S E
Sbjct: 193 TLVSTRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE 241
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 733 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAE 781
++V T +Y APEV+L G++Q CD WS+G I++E VG F + + E
Sbjct: 212 TIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQTHDNRE 260
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/268 (22%), Positives = 92/268 (34%), Gaps = 81/268 (30%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIY--------KCVGAFGEVTLVRKIDTNHLYVMKGS-- 592
G FG V R + + + +K + K EV ++K+ + +G
Sbjct: 65 GSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCYL 124
Query: 593 PHNNLYFVMDYIPGG--DLMSLLIKKGIFEEPLARFYIAELT----CAVESVHKMGFIHR 646
+ + VM+Y G DL+ + ++PL IA +T + +H IHR
Sbjct: 125 REHTAWLVMEYCLGSASDLLE------VHKKPLQEVEIAAVTHGALQGLAYLHSHNMIHR 178
Query: 647 DIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQ 706
D+K NIL+ G +KL DF G M P
Sbjct: 179 DVKAGNILLSEPGLVKLGDF---------------------GSASIMAP----------- 206
Query: 707 ECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL---RTGYTQLCDWWSVGVI 763
A+ VGTP ++APEV+L Y D WS+G+
Sbjct: 207 ------------------------ANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGIT 242
Query: 764 LYEMLVGSPPFLANTSAETQYKVINWES 791
E+ PP + Y + ES
Sbjct: 243 CIELAERKPPLFNMNAMSALYHIAQNES 270
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 31/51 (60%)
Query: 618 IFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
I EE L + +A + + IHRDIKP NIL+DR G+IKL DFG+
Sbjct: 122 IPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGI 172
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
Query: 736 GTPNYIAPEVL----LRTGYTQLCDWWSVGVILYEMLVGSPPFLA-NTSAETQYKVINWE 790
G Y+APE + R GY D WS+G+ LYE+ G P+ N+ + +V+ +
Sbjct: 187 GCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVVKGD 246
Query: 791 SC-LHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPFF 833
L E + SP + + LC D+ E+ HPF
Sbjct: 247 PPQLSNSEEREFSPSFINFV-NLCLTKDESKRPKYKELLKHPFI 289
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 65/148 (43%), Gaps = 29/148 (19%)
Query: 733 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI----- 787
S+V T Y APEVLL++ Y D WSVG I EM P F ++ + K++
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 788 ----NWESCLHIPAEA--------------QLSPEGADLILQLCT-GADKRLGKNASEVK 828
+W + +P +A + G DL+L+ T KR+ +A
Sbjct: 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRI--SAYSAL 295
Query: 829 AHPFFSNVDFEKGVRTLTPPHIPRIQNS 856
+HP+F D E+ L H+P QN+
Sbjct: 296 SHPYFQ--DLERCKENLD-SHLPPSQNT 320
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 31/171 (18%)
Query: 512 YKCV-----GAFGEVTLVRKIDTNHLYV-MKTIYKCVGVFG-------EVTLVRKIDT-N 557
Y+CV GA+G+V R + +V +K + G G EV ++R ++T
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 558 HLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKG 617
H V++ C T+ R L ++ +L +D +P + + IK
Sbjct: 73 HPNVVRLFDVC-------TVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 618 IFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
+F+ L ++ +H +HRD+KP NIL+ G IKL DFGL
Sbjct: 126 MFQ----------LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL 166
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 626 FYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC----TGFRWTHN--SK 679
+ + ++ C ++ +H G IHRD+KP NI++ D +K+ DFGL T F T ++
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 183
Query: 680 YYQSNGDHGRQDSMEPSEEWSQGTPGQECRC 710
YY++ E + WS G E C
Sbjct: 184 YYRAPEVILGMGYKENVDLWSVGCIMGEMVC 214
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI 787
V T Y APEV+L GY + D WSVG I+ EM+ F + KVI
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVI 232
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 49.3 bits (116), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/192 (23%), Positives = 75/192 (39%), Gaps = 53/192 (27%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTC-AVESVHKMGFIHRDIKPDNILI 655
+Y V +YI G L++ L G EP + C + + FIHRD+ N L+
Sbjct: 78 IYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFLESHQFIHRDLAARNCLV 137
Query: 656 DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPL 715
DRD +K++DFG+ R+ + +Y S G P+
Sbjct: 138 DRDLCVKVSDFGMT---RYVLDDQYVSSVG-------------------------TKFPV 169
Query: 716 KPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML-VGSPPF 774
K + APEV Y+ D W+ G++++E+ +G P+
Sbjct: 170 K-----------------------WSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPY 206
Query: 775 LANTSAETQYKV 786
T++E KV
Sbjct: 207 DLYTNSEVVLKV 218
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 626 FYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC----TGFRWTHN--SK 679
+ + ++ C ++ +H G IHRD+KP NI++ D +K+ DFGL T F T ++
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 680 YYQS 683
YY++
Sbjct: 190 YYRA 193
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
V T Y APEV+L GY + D WSVG I+ EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 6/91 (6%)
Query: 626 FYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC----TGFRWTHN--SK 679
+ + ++ C ++ +H G IHRD+KP NI++ D +K+ DFGL T F T ++
Sbjct: 135 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 194
Query: 680 YYQSNGDHGRQDSMEPSEEWSQGTPGQECRC 710
YY++ E + WS G E C
Sbjct: 195 YYRAPEVILGMGYKENVDLWSVGCIMGEMVC 225
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 27/53 (50%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI 787
V T Y APEV+L GY + D WSVG I+ EM+ F + KVI
Sbjct: 191 VVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVI 243
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y VM+ + + +I+ + E ++ + + ++ C ++ +H G IHRD+KP NI++
Sbjct: 103 DVYLVMELMDAN--LCQVIQMELDHERMS-YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 656 DRDGHIKLTDFGLC----TGFRWTHN--SKYYQS 683
D +K+ DFGL T F T ++YY++
Sbjct: 160 KSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
V T Y APEV+L GY + D WSVG I+ EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 25/163 (15%)
Query: 515 VGAFGEVTLVRKIDTNHLYVMKTIYKCVGVFG-------EVTLVRKIDT-NHLYVMKTIY 566
VGA+G V R + H +K++ G G EV L+R+++ H V++ +
Sbjct: 14 VGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRLMD 73
Query: 567 KCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARF 626
C + + + + H+ +L +D P L + IK L R
Sbjct: 74 VCATSRTDREIKVTLVFEHV-------DQDLRTYLDKAPPPGLPAETIKD------LMRQ 120
Query: 627 YIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
++ L + +H +HRD+KP+NIL+ G +KL DFGL
Sbjct: 121 FLRGL----DFLHANCIVHRDLKPENILVTSGGTVKLADFGLA 159
Score = 44.3 bits (103), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 42/98 (42%), Gaps = 23/98 (23%)
Query: 740 YIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI---------NWE 790
Y APEVLL++ Y D WSVG I EM P F N+ A+ K+ +W
Sbjct: 177 YRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 236
Query: 791 SCLHIPAEA--------------QLSPEGADLILQLCT 814
+ +P A ++ GA L+L++ T
Sbjct: 237 RDVSLPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLT 274
Score = 33.1 bits (74), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 36/75 (48%), Gaps = 8/75 (10%)
Query: 448 MDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTIYKCVGAFG-------EVTLVRKI 500
M S + + IGVGA+G V R + H A+K++ G G EV L+R++
Sbjct: 1 MATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL 60
Query: 501 DT-NHLYVMKTIYKC 514
+ H V++ + C
Sbjct: 61 EAFEHPNVVRLMDVC 75
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 66/295 (22%), Positives = 103/295 (34%), Gaps = 97/295 (32%)
Query: 529 TNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTN--HL 586
+NHL+++ I G V R T L+ +K F ++ +R +D
Sbjct: 7 SNHLWLLSDILGQ-GATANVFRGRHKKTGDLFAIK-------VFNNISFLRPVDVQMREF 58
Query: 587 YVMKGSPHNNLY---------------FVMDYIPGGDLMSLLIK-KGIFEEPLARFYIA- 629
V+K H N+ +M++ P G L ++L + + P + F I
Sbjct: 59 EVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVL 118
Query: 630 -ELTCAVESVHKMGFIHRDIKPDNIL--IDRDGH--IKLTDFGLCTGFRWTHNSKYYQSN 684
++ + + + G +HR+IKP NI+ I DG KLTDF
Sbjct: 119 RDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF------------------ 160
Query: 685 GDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPE 744
G +E E++ SL GT Y+ P+
Sbjct: 161 ---GAARELEDDEQFV--------------------------------SLYGTEEYLHPD 185
Query: 745 VLLRT--------GYTQLCDWWSVGVILYEMLVGSPPFL----ANTSAETQYKVI 787
+ R Y D WS+GV Y GS PF + E YK+I
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y VM+ + + +I+ + E ++ + + ++ C ++ +H G IHRD+KP NI++
Sbjct: 104 DVYLVMELMDAN--LCQVIQMELDHERMS-YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 160
Query: 656 DRDGHIKLTDFGLC----TGFRWTHN--SKYYQS 683
D +K+ DFGL T F T ++YY++
Sbjct: 161 KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 194
Score = 36.6 bits (83), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
V T Y APEV+L GY + D WSVG I+ EM+
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 74/201 (36%), Gaps = 56/201 (27%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN----NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIA 629
E+ ++R + H+ KG + ++ VM+Y+P G L L + + L F A
Sbjct: 61 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLF--A 118
Query: 630 ELTC-AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHG 688
+ C + +H +IHR + N+L+D D +K+ DFGL H + +GD
Sbjct: 119 QQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD-- 176
Query: 689 RQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLR 748
SP+ + APE L
Sbjct: 177 ------------------------SPV-----------------------FWYAPECLKE 189
Query: 749 TGYTQLCDWWSVGVILYEMLV 769
+ D WS GV LYE+L
Sbjct: 190 CKFYYASDVWSFGVTLYELLT 210
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y VM+ + + +I+ + E ++ + + ++ C ++ +H G IHRD+KP NI++
Sbjct: 103 DVYLVMELMDAN--LCQVIQMELDHERMS-YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 656 DRDGHIKLTDFGLC----TGFRWTHN--SKYYQS 683
D +K+ DFGL T F T ++YY++
Sbjct: 160 KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Score = 36.6 bits (83), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
V T Y APEV+L GY + D WSVG I+ EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 601 MDYIPGGDLMSLLIKKG-IFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDG 659
M+++ GG L +L K G I E+ L + IA + K +HRD+KP NIL++ G
Sbjct: 86 MEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRG 145
Query: 660 HIKLTDFGL 668
IKL DFG+
Sbjct: 146 EIKLCDFGV 154
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%)
Query: 730 LAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPP 773
+A+ VGT +Y++PE L T Y+ D WS+G+ L EM VG P
Sbjct: 162 MANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 31/54 (57%)
Query: 729 CLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAET 782
C ++GTP Y+APE+L T D W++G+I Y +L + PF+ + ET
Sbjct: 188 CELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQET 241
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 42/78 (53%), Gaps = 7/78 (8%)
Query: 597 LYFVMDYIPGGDLMSLLI---KKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
+ +++Y GG++ SL + + + E + R I ++ V +H+ +H D+KP NI
Sbjct: 104 IILILEYAAGGEIFSLCLPELAEMVSENDVIRL-IKQILEGVYYLHQNNIVHLDLKPQNI 162
Query: 654 LIDRD---GHIKLTDFGL 668
L+ G IK+ DFG+
Sbjct: 163 LLSSIYPLGDIKIVDFGM 180
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 626 FYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC----TGFRWTHN--SK 679
+ + ++ C ++ +H G IHRD+KP NI++ D +K+ DFGL T F T ++
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 680 YYQS 683
YY++
Sbjct: 190 YYRA 193
Score = 36.6 bits (83), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
V T Y APEV+L GY + D WSVG I+ EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y VM+ + + +I+ + E ++ + + ++ C ++ +H G IHRD+KP NI++
Sbjct: 141 DVYLVMELMDAN--LCQVIQMELDHERMS-YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 197
Query: 656 DRDGHIKLTDFGLC----TGFRWTHN--SKYYQS 683
D +K+ DFGL T F T ++YY++
Sbjct: 198 KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 231
Score = 37.0 bits (84), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
V T Y APEV+L GY + D WSVG I+ EM+
Sbjct: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 626 FYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC----TGFRWTHN--SK 679
+ + ++ C ++ +H G IHRD+KP NI++ D +K+ DFGL T F T ++
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 183
Query: 680 YYQS 683
YY++
Sbjct: 184 YYRA 187
Score = 36.6 bits (83), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
V T Y APEV+L GY + D WSVG I+ EM+
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 626 FYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC----TGFRWTHN--SK 679
+ + ++ C ++ +H G IHRD+KP NI++ D +K+ DFGL T F T ++
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 190
Query: 680 YYQS 683
YY++
Sbjct: 191 YYRA 194
Score = 36.6 bits (83), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
V T Y APEV+L GY + D WSVG I+ EM+
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y VM+ + + +I+ + E ++ + + ++ C ++ +H G IHRD+KP NI++
Sbjct: 102 DVYLVMELMDAN--LCQVIQMELDHERMS-YLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 158
Query: 656 DRDGHIKLTDFGLC----TGFRWTHN--SKYYQS 683
D +K+ DFGL T F T ++YY++
Sbjct: 159 KSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRA 192
Score = 36.6 bits (83), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
V T Y APEV+L GY + D WSVG I+ EM+
Sbjct: 185 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 74/201 (36%), Gaps = 56/201 (27%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN----NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIA 629
E+ ++R + H+ KG + ++ VM+Y+P G L L + + L F A
Sbjct: 60 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQLLLF--A 117
Query: 630 ELTC-AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHG 688
+ C + +H +IHR + N+L+D D +K+ DFGL H + +GD
Sbjct: 118 QQICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGD-- 175
Query: 689 RQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLR 748
SP+ + APE L
Sbjct: 176 ------------------------SPV-----------------------FWYAPECLKE 188
Query: 749 TGYTQLCDWWSVGVILYEMLV 769
+ D WS GV LYE+L
Sbjct: 189 CKFYYASDVWSFGVTLYELLT 209
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 48.9 bits (115), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 626 FYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC----TGFRWTHN--SK 679
+ + ++ C ++ +H G IHRD+KP NI++ D +K+ DFGL T F T ++
Sbjct: 123 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 182
Query: 680 YYQS 683
YY++
Sbjct: 183 YYRA 186
Score = 36.6 bits (83), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
V T Y APEV+L GY + D WSVG I+ EM+
Sbjct: 179 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 626 FYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC----TGFRWTHN--SK 679
+ + ++ C ++ +H G IHRD+KP NI++ D +K+ DFGL T F T ++
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 680 YYQS 683
YY++
Sbjct: 190 YYRA 193
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI 787
V T Y APEV+L GY + D WSVG I+ EM+ G F + KVI
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI 238
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 626 FYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC----TGFRWTHN--SK 679
+ + ++ C ++ +H G IHRD+KP NI++ D +K+ DFGL T F T ++
Sbjct: 124 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 183
Query: 680 YYQS 683
YY++
Sbjct: 184 YYRA 187
Score = 36.6 bits (83), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
V T Y APEV+L GY + D WSVG I+ EM+
Sbjct: 180 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 626 FYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC----TGFRWTHN--SK 679
+ + ++ C ++ +H G IHRD+KP NI++ D +K+ DFGL T F T ++
Sbjct: 168 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 227
Query: 680 YYQS 683
YY++
Sbjct: 228 YYRA 231
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
V T Y APEV+L GY + D WSVG I+ EM+
Sbjct: 224 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 626 FYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC----TGFRWTHN--SK 679
+ + ++ C ++ +H G IHRD+KP NI++ D +K+ DFGL T F T ++
Sbjct: 131 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 190
Query: 680 YYQS 683
YY++
Sbjct: 191 YYRA 194
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI 787
V T Y APEV+L GY + D WSVG I+ EM+ G F + KVI
Sbjct: 187 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI 239
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 626 FYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC----TGFRWTHN--SK 679
+ + ++ C ++ +H G IHRD+KP NI++ D +K+ DFGL T F T ++
Sbjct: 130 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 680 YYQS 683
YY++
Sbjct: 190 YYRA 193
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI 787
V T Y APEV+L GY + D WSVG I+ EM+ G F + KVI
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI 238
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 102/254 (40%), Gaps = 67/254 (26%)
Query: 546 GEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKG----SPHNNLYFVM 601
GEV V+K+ + ++ + E+ +++ + +++ KG + NL +M
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFER------EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 92
Query: 602 DYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH 660
+Y+P G L L K K + Y +++ +E + +IHRD+ NIL++ +
Sbjct: 93 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 152
Query: 661 IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXX 720
+K+ DFGL + ++++ EP E SP+
Sbjct: 153 VKIGDFGLTKVL--PQDKEFFKVK---------EPGE---------------SPI----- 181
Query: 721 XXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLV-----GSPP-- 773
+ APE L + ++ D WS GV+LYE+ SPP
Sbjct: 182 ------------------FWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAE 223
Query: 774 FLANTSAETQYKVI 787
F+ + Q ++I
Sbjct: 224 FMRMIGNDKQGQMI 237
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/241 (22%), Positives = 97/241 (40%), Gaps = 60/241 (24%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNN------ 596
G FG+ V +T + VMK + + F E T ++ + VM+ H N
Sbjct: 21 GCFGQAIKVTHRETGEVMVMKELIR----FDEET--QRTFLKEVKVMRCLEHPNVLKFIG 74
Query: 597 -------LYFVMDYIPGGDLMSLLIKKGIFEEPLAR--FYIAELTCAVESVHKMGFIHRD 647
L F+ +YI GG L + IK + P ++ + ++ + +H M IHRD
Sbjct: 75 VLYKDKRLNFITEYIKGGTLRGI-IKSMDSQYPWSQRVSFAKDIASGMAYLHSMNIIHRD 133
Query: 648 IKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
+ N L+ + ++ + DFGL R + K T +
Sbjct: 134 LNSHNCLVRENKNVVVADFGLA---RLMVDEK-----------------------TQPEG 167
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 767
R + P R +++VG P ++APE++ Y + D +S G++L E+
Sbjct: 168 LRSLKKP------------DRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEI 215
Query: 768 L 768
+
Sbjct: 216 I 216
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 6/64 (9%)
Query: 626 FYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC----TGFRWTHN--SK 679
+ + ++ C ++ +H G IHRD+KP NI++ D +K+ DFGL T F T ++
Sbjct: 128 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTR 187
Query: 680 YYQS 683
YY++
Sbjct: 188 YYRA 191
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 29/53 (54%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI 787
V T Y APEV+L GY + D WSVG I+ E++ GS F + KVI
Sbjct: 184 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVI 236
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 29/44 (65%)
Query: 626 FYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
+ + ++ C ++ +H G IHRD+KP NI++ D +K+ DFGL
Sbjct: 132 YLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLA 175
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 28/54 (51%)
Query: 734 LVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI 787
V T Y APEV+L GY + D WSVG I+ EM+ G F + KVI
Sbjct: 187 FVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI 240
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 48.5 bits (114), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Query: 599 FVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD 658
+++ + G DL +++ + + +E + +F + +L ++ +H G IHRD+KP N+ ++ D
Sbjct: 101 YLVTTLMGADLNNIVKCQALSDEHV-QFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVNED 159
Query: 659 GHIKLTDFGLC 669
+++ DFGL
Sbjct: 160 CELRILDFGLA 170
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 35/132 (26%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVG----------------------- 770
V T Y APE++L Y Q D WSVG I+ E+L G
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTP 240
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLS------PEGADLILQ-LCTGADKRLGKN 823
SP LA S+E I +S +P + S P DL+ + L +D+R+ +
Sbjct: 241 SPEVLAKISSEHARTYI--QSLPPMPQKDLSSIFRGANPLAIDLLGRMLVLDSDQRV--S 296
Query: 824 ASEVKAHPFFSN 835
A+E AH +FS
Sbjct: 297 AAEALAHAYFSQ 308
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 75/171 (43%), Gaps = 31/171 (18%)
Query: 512 YKCV-----GAFGEVTLVRKIDTNHLYV-MKTIYKCVGVFG-------EVTLVRKIDT-N 557
Y+CV GA+G+V R + +V +K + G G EV ++R ++T
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 558 HLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKG 617
H V++ C T+ R L ++ +L +D +P + + IK
Sbjct: 73 HPNVVRLFDVC-------TVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 618 IFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
+F+ L ++ +H +HRD+KP NIL+ G IKL DFGL
Sbjct: 126 MFQ----------LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGL 166
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 26/129 (20%)
Query: 733 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI----- 787
S+V T Y APEVLL++ Y D WSVG I EM P F ++ + K++
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 788 ----NWESCLHIPAEA--------------QLSPEGADLILQLCT-GADKRLGKNASEVK 828
+W + +P +A + G DL+L+ T KR+ +A
Sbjct: 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRI--SAYSAL 295
Query: 829 AHPFFSNVD 837
+HP+F +++
Sbjct: 296 SHPYFQDLE 304
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/172 (26%), Positives = 75/172 (43%), Gaps = 31/172 (18%)
Query: 512 YKCV-----GAFGEVTLVRKIDTNHLYV-MKTIYKCVGVFG-------EVTLVRKIDT-N 557
Y+CV GA+G+V R + +V +K + G G EV ++R ++T
Sbjct: 13 YECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFE 72
Query: 558 HLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKG 617
H V++ C T+ R L ++ +L +D +P + + IK
Sbjct: 73 HPNVVRLFDVC-------TVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDM 125
Query: 618 IFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
+F+ L ++ +H +HRD+KP NIL+ G IKL DFGL
Sbjct: 126 MFQ----------LLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLA 167
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 26/125 (20%)
Query: 733 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI----- 787
S+V T Y APEVLL++ Y D WSVG I EM P F ++ + K++
Sbjct: 178 SVVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGL 237
Query: 788 ----NWESCLHIPAEA--------------QLSPEGADLILQLCT-GADKRLGKNASEVK 828
+W + +P +A + G DL+L+ T KR+ +A
Sbjct: 238 PGEEDWPRDVALPRQAFHSKSAQPIEKFVTDIDELGKDLLLKCLTFNPAKRI--SAYSAL 295
Query: 829 AHPFF 833
+HP+F
Sbjct: 296 SHPYF 300
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y VM+ + +S +I+ + E ++ + + ++ ++ +H G IHRD+KP NI++
Sbjct: 103 DVYIVMELMDAN--LSQVIQMELDHERMS-YLLYQMLVGIKHLHSAGIIHRDLKPSNIVV 159
Query: 656 DRDGHIKLTDFGLC----TGFRWTHN--SKYYQS 683
D +K+ DFGL T F T ++YY++
Sbjct: 160 KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 32/65 (49%), Gaps = 5/65 (7%)
Query: 728 RCLAHSLVGTPN-----YIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAET 782
R S + TP Y APEV+L GY + D WSVGVI+ EM+ G F +
Sbjct: 174 RTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQ 233
Query: 783 QYKVI 787
KVI
Sbjct: 234 WNKVI 238
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 82/206 (39%), Gaps = 60/206 (29%)
Query: 574 EVTLVRKIDTNHLYVMKG--SPHNNLYFVMDYIPGGDLMSLL-IKKGIFEEPLA---RFY 627
E+ ++ K +L + G S ++L V Y+P G L+ L G PL+ R
Sbjct: 80 EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPLSWHMRCK 137
Query: 628 IAELTC-AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGD 686
IA+ + +H+ IHRDIK NIL+D K++DFGL
Sbjct: 138 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLA----------------- 180
Query: 687 HGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVL 746
SE+++ Q + +VGT Y+APE
Sbjct: 181 -------RASEKFA--------------------------QTVMXSRIVGTTAYMAPEA- 206
Query: 747 LRTGYTQLCDWWSVGVILYEMLVGSP 772
LR T D +S GV+L E++ G P
Sbjct: 207 LRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/258 (22%), Positives = 89/258 (34%), Gaps = 70/258 (27%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNL----- 597
G +G V R DT + +K + + +++KI + ++K H NL
Sbjct: 14 GSYGVVFKCRNRDTGQIVAIKKFLES----EDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 598 --------YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIK 649
+ V +Y L L + E L + + AV HK IHRD+K
Sbjct: 70 VFRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCIHRDVK 129
Query: 650 PDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECR 709
P+NILI + IKL DFG T S YY
Sbjct: 130 PENILITKHSVIKLCDFGFARLL--TGPSDYYDDE------------------------- 162
Query: 710 CINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL-RTGYTQLCDWWSVGVILYEML 768
V T Y +PE+L+ T Y D W++G + E+L
Sbjct: 163 -------------------------VATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELL 197
Query: 769 VGSPPFLANTSAETQYKV 786
G P + + + Y +
Sbjct: 198 SGVPLWPGKSDVDQLYLI 215
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y VM+ + +S +I+ + E ++ + + ++ ++ +H G IHRD+KP NI++
Sbjct: 103 DVYIVMELMDAN--LSQVIQMELDHERMS-YLLYQMLVGIKHLHSAGIIHRDLKPSNIVV 159
Query: 656 DRDGHIKLTDFGLC----TGFRWTHN--SKYYQS 683
D +K+ DFGL T F T ++YY++
Sbjct: 160 KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 29/53 (54%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI 787
V T Y APEV+L GY + D WSVGVI+ EM+ G F + KVI
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVI 238
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 72/183 (39%), Gaps = 50/183 (27%)
Query: 588 VMKGSPHNNLYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKMGFIHR 646
V G +L VM+Y+P G L L + + + Y +++ +E + +HR
Sbjct: 79 VSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHR 138
Query: 647 DIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQ 706
D+ NIL++ + H+K+ DFGL +K + D+ + PGQ
Sbjct: 139 DLAARNILVESEAHVKIADFGL---------AKLLPLDKDY-----------YVVREPGQ 178
Query: 707 ECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 766
SP+ + APE L +++ D WS GV+LYE
Sbjct: 179 ------SPI-----------------------FWYAPESLSDNIFSRQSDVWSFGVVLYE 209
Query: 767 MLV 769
+
Sbjct: 210 LFT 212
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 82/206 (39%), Gaps = 60/206 (29%)
Query: 574 EVTLVRKIDTNHLYVMKG--SPHNNLYFVMDYIPGGDLMSLL-IKKGIFEEPLA---RFY 627
E+ ++ K +L + G S ++L V Y+P G L+ L G PL+ R
Sbjct: 80 EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPLSWHMRCK 137
Query: 628 IAELTC-AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGD 686
IA+ + +H+ IHRDIK NIL+D K++DFGL
Sbjct: 138 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLA----------------- 180
Query: 687 HGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVL 746
SE+++ Q + +VGT Y+APE
Sbjct: 181 -------RASEKFA--------------------------QTVMXXRIVGTTAYMAPEA- 206
Query: 747 LRTGYTQLCDWWSVGVILYEMLVGSP 772
LR T D +S GV+L E++ G P
Sbjct: 207 LRGEITPKSDIYSFGVVLLEIITGLP 232
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 72/183 (39%), Gaps = 50/183 (27%)
Query: 588 VMKGSPHNNLYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKMGFIHR 646
V G +L VM+Y+P G L L + + + Y +++ +E + +HR
Sbjct: 92 VSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHR 151
Query: 647 DIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQ 706
D+ NIL++ + H+K+ DFGL +K + D+ + PGQ
Sbjct: 152 DLAARNILVESEAHVKIADFGL---------AKLLPLDKDY-----------YVVREPGQ 191
Query: 707 ECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 766
SP+ + APE L +++ D WS GV+LYE
Sbjct: 192 ------SPI-----------------------FWYAPESLSDNIFSRQSDVWSFGVVLYE 222
Query: 767 MLV 769
+
Sbjct: 223 LFT 225
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 47.8 bits (112), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 53/94 (56%), Gaps = 9/94 (9%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
++Y VM+ + +S +I+ + E ++ + + ++ ++ +H G IHRD+KP NI++
Sbjct: 103 DVYIVMELMDAN--LSQVIQMELDHERMS-YLLYQMLVGIKHLHSAGIIHRDLKPSNIVV 159
Query: 656 DRDGHIKLTDFGLC----TGFRWTHN--SKYYQS 683
D +K+ DFGL T F T ++YY++
Sbjct: 160 KSDATLKILDFGLARTAGTSFMMTPYVVTRYYRA 193
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI 787
V T Y APEV+L GY + D WSVG I+ EM+ G F + KVI
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVI 238
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 72/183 (39%), Gaps = 50/183 (27%)
Query: 588 VMKGSPHNNLYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKMGFIHR 646
V G +L VM+Y+P G L L + + + Y +++ +E + +HR
Sbjct: 80 VSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCVHR 139
Query: 647 DIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQ 706
D+ NIL++ + H+K+ DFGL +K + D+ + PGQ
Sbjct: 140 DLAARNILVESEAHVKIADFGL---------AKLLPLDKDY-----------YVVREPGQ 179
Query: 707 ECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 766
SP+ + APE L +++ D WS GV+LYE
Sbjct: 180 ------SPI-----------------------FWYAPESLSDNIFSRQSDVWSFGVVLYE 210
Query: 767 MLV 769
+
Sbjct: 211 LFT 213
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 82/206 (39%), Gaps = 60/206 (29%)
Query: 574 EVTLVRKIDTNHLYVMKG--SPHNNLYFVMDYIPGGDLMSLL-IKKGIFEEPLA---RFY 627
E+ ++ K +L + G S ++L V Y+P G L+ L G PL+ R
Sbjct: 74 EIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPLSWHMRCK 131
Query: 628 IAELTC-AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGD 686
IA+ + +H+ IHRDIK NIL+D K++DFGL
Sbjct: 132 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLA----------------- 174
Query: 687 HGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVL 746
SE+++ Q + +VGT Y+APE
Sbjct: 175 -------RASEKFA--------------------------QXVMXXRIVGTTAYMAPEA- 200
Query: 747 LRTGYTQLCDWWSVGVILYEMLVGSP 772
LR T D +S GV+L E++ G P
Sbjct: 201 LRGEITPKSDIYSFGVVLLEIITGLP 226
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 47.4 bits (111), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 100 NDVYLVT-HLMGADLNNI-VKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 158 VNEDXELKILDFGLA 172
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 243 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 300
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 301 QALAHAYFA 309
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 47.0 bits (110), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
+ Y VM ++ DL ++ K F E ++ + ++ ++ +H G +HRD+KP N+ +
Sbjct: 103 DFYLVMPFM-QTDLQKIMGLK--FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV 159
Query: 656 DRDGHIKLTDFGLC 669
+ D +K+ DFGL
Sbjct: 160 NEDCELKILDFGLA 173
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 53/128 (41%), Gaps = 31/128 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN----- 788
V T Y APEV+L Y Q D WSVG I+ EML G F + +++
Sbjct: 184 VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP 243
Query: 789 ----------------WESCLHIPAE--AQL----SPEGADLILQLCT-GADKRLGKNAS 825
+S P + QL SP+ ADL+ ++ DKRL A+
Sbjct: 244 GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRL--TAA 301
Query: 826 EVKAHPFF 833
+ HPFF
Sbjct: 302 QALTHPFF 309
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 65/295 (22%), Positives = 102/295 (34%), Gaps = 97/295 (32%)
Query: 529 TNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTN--HL 586
+NHL+++ I G V R T L+ +K F ++ +R +D
Sbjct: 7 SNHLWLLSDILG-QGATANVFRGRHKKTGDLFAIKV-------FNNISFLRPVDVQMREF 58
Query: 587 YVMKGSPHNNLY---------------FVMDYIPGGDLMSLLIK-KGIFEEPLARFYIA- 629
V+K H N+ +M++ P G L ++L + + P + F I
Sbjct: 59 EVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVL 118
Query: 630 -ELTCAVESVHKMGFIHRDIKPDNIL--IDRDGH--IKLTDFGLCTGFRWTHNSKYYQSN 684
++ + + + G +HR+IKP NI+ I DG KLTDF
Sbjct: 119 RDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDF------------------ 160
Query: 685 GDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPE 744
G +E E++ L GT Y+ P+
Sbjct: 161 ---GAARELEDDEQFV--------------------------------XLYGTEEYLHPD 185
Query: 745 VLLRT--------GYTQLCDWWSVGVILYEMLVGSPPFL----ANTSAETQYKVI 787
+ R Y D WS+GV Y GS PF + E YK+I
Sbjct: 186 MYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKII 240
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/97 (28%), Positives = 49/97 (50%), Gaps = 2/97 (2%)
Query: 574 EVTLVRKIDTNHLYVMKGS-PHNNLYFVMDYIPGGDLMSLL-IKKGIFEEPLARFYIAEL 631
E +R+ D H+ + G N ++ +M+ G+L S L ++K + Y +L
Sbjct: 61 EALTMRQFDHPHIVKLIGVITENPVWIIMELCTLGELRSFLQVRKFSLDLASLILYAYQL 120
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
+ A+ + F+HRDI N+L+ + +KL DFGL
Sbjct: 121 STALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGL 157
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 68/334 (20%), Positives = 112/334 (33%), Gaps = 104/334 (31%)
Query: 515 VGAFGEVTLVRKIDTNHLYVMKTI----------YKCVGVFGEVTLVRKIDT-NHLYVMK 563
VGA+G V R + H +K++ + EV L+R+++ H V++
Sbjct: 19 VGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVR 78
Query: 564 TIYKCVGAFGEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPL 623
+ C + + + + H+ +L +D P L + IK L
Sbjct: 79 LMDVCATSRTDREIKVTLVFEHV-------DQDLRTYLDKAPPPGLPAETIKD------L 125
Query: 624 ARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQS 683
R ++ L + +H +HRD+KP+NIL+ G +KL DFGL + +
Sbjct: 126 MRQFLRGL----DFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA------ 175
Query: 684 NGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAP 743
L P+ L S TP
Sbjct: 176 -------------------------------LTPVVVTLWYRAPEVLLQSTYATP----- 199
Query: 744 EVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI---------NWESCLH 794
D WSVG I EM P F N+ A+ K+ +W +
Sbjct: 200 -----------VDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWPRDVS 248
Query: 795 IPAEA--------------QLSPEGADLILQLCT 814
+P A ++ GA L+L++ T
Sbjct: 249 LPRGAFPPRGPRPVQSVVPEMEESGAQLLLEMLT 282
Score = 30.0 bits (66), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/80 (25%), Positives = 35/80 (43%), Gaps = 11/80 (13%)
Query: 446 AKMDKSMFIKIKPIGVGAFGEVTLVRKIDTNHLYAMKTI----------YKCVGAFGEVT 495
M S + + IGVGA+G V R + H A+K++ + EV
Sbjct: 4 GSMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVA 63
Query: 496 LVRKIDT-NHLYVMKTIYKC 514
L+R+++ H V++ + C
Sbjct: 64 LLRRLEAFEHPNVVRLMDVC 83
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 47.0 bits (110), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 100 NDVYLVT-HLMGADLNNI-VKXQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 158 VNEDCELKILDFGLA 172
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 243 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 300
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 301 QALAHAYFA 309
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 47.0 bits (110), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 102 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 159
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 160 VNEDSELKILDFGLA 174
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 245 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 302
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 303 QALAHAYFA 311
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 730 LAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
+A VGTP+++APEV+ R Y + D W GVIL+ +L G PF
Sbjct: 189 VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 592 SPHNNLYFVMDYIPGGDLMSLLIKKG----IFEEPLARFYIAELTCAVESVHKMGFIHRD 647
S LY V +++ G DL ++K+ ++ E +A Y+ ++ A+ H IHRD
Sbjct: 96 SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRD 155
Query: 648 IKPDNILI---DRDGHIKLTDFGL 668
+KP +L+ + +KL FG+
Sbjct: 156 VKPHCVLLASKENSAPVKLGGFGV 179
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 730 LAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
+A VGTP+++APEV+ R Y + D W GVIL+ +L G PF
Sbjct: 191 VAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 235
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 43/84 (51%), Gaps = 7/84 (8%)
Query: 592 SPHNNLYFVMDYIPGGDLMSLLIKKG----IFEEPLARFYIAELTCAVESVHKMGFIHRD 647
S LY V +++ G DL ++K+ ++ E +A Y+ ++ A+ H IHRD
Sbjct: 98 SSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDNNIIHRD 157
Query: 648 IKPDNILI---DRDGHIKLTDFGL 668
+KP +L+ + +KL FG+
Sbjct: 158 VKPHCVLLASKENSAPVKLGGFGV 181
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 106 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 163
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 164 VNEDSELKILDFGLA 178
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 249 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 306
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 307 QALAHAYFA 315
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%)
Query: 733 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAE 781
+LV +Y APEV+L G++Q CD WS+G IL E +G F + S E
Sbjct: 193 TLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDSKE 241
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 46.6 bits (109), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 27/157 (17%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 100 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 655 IDRDGHIKLTDFGLC-------TGF---RWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTP 704
++ D +K+ DFGL TG+ RW + + N H Q + WS G
Sbjct: 158 VNEDCELKILDFGLARHTDDEMTGYVATRW-YRAPEIMLNAMHYNQ----TVDIWSVG-- 210
Query: 705 GQECRCINSPL---KPLXXXXXXXHQRCLAHSLVGTP 738
CI + L + L Q L LVGTP
Sbjct: 211 -----CIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLRT-GYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 183 VATRWYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 243 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 300
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 301 QALAHAYFA 309
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 96 NDVYLVT-HLMGADLNNI-VKCAKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 153
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 154 VNEDCELKILDFGLA 168
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + AQ+ +P DL+ + L +DKR+ A+
Sbjct: 239 GAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 296
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 297 QALAHAYFA 305
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 46.6 bits (109), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 5/55 (9%)
Query: 619 FEEPLARFYIAELTCAVESV-----HKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
+ P+ + ++T A+ K G IHRD+KP NIL+D G IKL DFG+
Sbjct: 117 MQGPIPERILGKMTVAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGI 171
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFGLCTGF 672
R+YI EL A++ H G +HRD+KP N++ID + ++L D+GL +
Sbjct: 128 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 176
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFGLC 669
R+YI EL A++ H G +HRD+KP N++ID + ++L D+GL
Sbjct: 149 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 194
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFGLCTGF 672
R+YI EL A++ H G +HRD+KP N++ID + ++L D+GL +
Sbjct: 129 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 177
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 57/229 (24%), Positives = 91/229 (39%), Gaps = 65/229 (28%)
Query: 600 VMDYIPGGDLMSLLIKKGIFEEP-------LARFYIAELTCAVESVHKMGFIHRDIKPDN 652
++ ++ GDL + L+ I E P L RF + ++ C +E + FIHRD+ N
Sbjct: 109 ILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV-DIACGMEYLSSRNFIHRDLAARN 167
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCIN 712
++ D + + DFGL + K Y +GD+ RQ C +
Sbjct: 168 CMLAEDMTVCVADFGL--------SRKIY--SGDYYRQG------------------CAS 199
Query: 713 S-PLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLV-G 770
P+K ++A E L YT D W+ GV ++E++ G
Sbjct: 200 KLPVK-----------------------WLALESLADNLYTVHSDVWAFGVTMWEIMTRG 236
Query: 771 SPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLCTGADKR 819
P+ +AE Y + + L P E E DL+ Q C AD +
Sbjct: 237 QTPYAGIENAEI-YNYLIGGNRLKQPPECM--EEVYDLMYQ-CWSADPK 281
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFGLCTGF 672
R+YI EL A++ H G +HRD+KP N++ID + ++L D+GL +
Sbjct: 128 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 176
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFGLCTGF 672
R+YI EL A++ H G +HRD+KP N++ID + ++L D+GL +
Sbjct: 128 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 176
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 105 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 162
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 163 VNEDXELKILDFGLA 177
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 248 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 305
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 306 QALAHAYFA 314
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFGLCTGF 672
R+YI EL A++ H G +HRD+KP N++ID + ++L D+GL +
Sbjct: 128 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 176
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 46.2 bits (108), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 105 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 162
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 163 VNEDXELKILDFGLA 177
Score = 37.4 bits (85), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 248 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 305
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 306 QALAHAYFA 314
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFGLCTGF 672
R+YI EL A++ H G +HRD+KP N++ID + ++L D+GL +
Sbjct: 128 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 176
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFGLCTGF 672
R+YI EL A++ H G +HRD+KP N++ID + ++L D+GL +
Sbjct: 129 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 177
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%), Gaps = 1/49 (2%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFGLCTGF 672
R+YI EL A++ H G +HRD+KP N++ID + ++L D+GL +
Sbjct: 128 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFY 176
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRD-GHIKLTDFGLC 669
R+YI EL A++ H G +HRD+KP N++ID + ++L D+GL
Sbjct: 130 RYYIYELLKALDYCHSQGIMHRDVKPHNVMIDHELRKLRLIDWGLA 175
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 111 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 168
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 169 VNEDXELKILDFGLA 183
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 253
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 254 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 311
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 312 QALAHAYFA 320
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 46.2 bits (108), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 12/90 (13%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 107 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 164
Query: 655 IDRDGHIKLTDFGLC-------TGF---RW 674
++ D +K+ DFGL TG+ RW
Sbjct: 165 VNEDCELKILDFGLARHTADEMTGYVATRW 194
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 250 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 307
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 308 QALAHAYFA 316
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 77/170 (45%), Gaps = 19/170 (11%)
Query: 516 GAFGEVTLVR---KIDTNHLYVMKTIYKCVGVFGEVTLVR----KIDTNHLYVMKTIYKC 568
GA G R + + HL ++ + K G FG V + R + +T + +K +
Sbjct: 24 GAMGSAFEDRDPTQFEERHLKFLQQLGK--GNFGSVEMCRYDPLQDNTGEVVAVKKLQHS 81
Query: 569 VGAF-----GEVTLVRKIDTNHLYVMKG----SPHNNLYFVMDYIPGGDLMSLLIK-KGI 618
E+ +++ + +++ KG + NL +M+Y+P G L L K K
Sbjct: 82 TEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKER 141
Query: 619 FEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
+ Y +++ +E + +IHRD+ NIL++ + +K+ DFGL
Sbjct: 142 IDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL 191
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 48/90 (53%), Gaps = 12/90 (13%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 107 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 164
Query: 655 IDRDGHIKLTDFGLC-------TGF---RW 674
++ D +K+ DFGL TG+ RW
Sbjct: 165 VNEDCELKILDFGLARHTADEMTGYVATRW 194
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 250 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 307
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 308 QALAHAYFA 316
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 42/74 (56%), Gaps = 3/74 (4%)
Query: 596 NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILI 655
+ Y VM ++ DL ++ + F E ++ + ++ ++ +H G +HRD+KP N+ +
Sbjct: 121 DFYLVMPFMQT-DLQKIMGME--FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAV 177
Query: 656 DRDGHIKLTDFGLC 669
+ D +K+ DFGL
Sbjct: 178 NEDCELKILDFGLA 191
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 53/128 (41%), Gaps = 31/128 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVIN----- 788
V T Y APEV+L Y Q D WSVG I+ EML G F + +++
Sbjct: 202 VVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVP 261
Query: 789 ----------------WESCLHIPAE--AQL----SPEGADLILQLCT-GADKRLGKNAS 825
+S P + QL SP+ ADL+ ++ DKRL A+
Sbjct: 262 GTEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRL--TAA 319
Query: 826 EVKAHPFF 833
+ HPFF
Sbjct: 320 QALTHPFF 327
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 45.8 bits (107), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/200 (20%), Positives = 77/200 (38%), Gaps = 54/200 (27%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN----NLYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYI 628
E+ +++ + ++ + +G + L VM+Y+P G L L + + + Y
Sbjct: 58 EIQILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYS 117
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHG 688
+++ +E + +HRD+ NIL++ + H+K+ DFGL + +
Sbjct: 118 SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVRE----- 172
Query: 689 RQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLR 748
PGQ SP+ + APE L
Sbjct: 173 ---------------PGQ------SPI-----------------------FWYAPESLSD 188
Query: 749 TGYTQLCDWWSVGVILYEML 768
+++ D WS GV+LYE+
Sbjct: 189 NIFSRQSDVWSFGVVLYELF 208
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 100 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 158 VNEDCELKILDFGLA 172
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 243 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 300
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 301 QALAHAYFA 309
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 100 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 158 VNEDCELKILDFGLA 172
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 243 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 300
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 301 QALAHAYFA 309
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 107 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 164
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 165 VNEDCELKILDFGLA 179
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 250 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 307
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 308 QALAHAYFA 316
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 105 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 162
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 163 VNEDCELKILDFGLA 177
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 248 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 305
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 306 QALAHAYFA 314
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 106 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 163
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 164 VNEDCELKILDFGLA 178
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 249 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 306
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 307 QALAHAYFA 315
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 99 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 156
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 157 VNEDCELKILDFGLA 171
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 182 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 241
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 242 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 299
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 300 QALAHAYFA 308
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 102 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 159
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 160 VNEDCELKILDFGLA 174
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 245 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 302
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 303 QALAHAYFA 311
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 107 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 164
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 165 VNEDCELKILDFGLA 179
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 190 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 250 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 307
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 308 QALAHAYFA 316
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 100 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 158 VNEDCELKILDFGLA 172
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 243 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 300
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 301 QALAHAYFA 309
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 100 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 158 VNEDCELKILDFGLA 172
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + AQ+ +P DL+ + L +DKR+ A+
Sbjct: 243 GAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 300
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 301 QALAHAYFA 309
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 129 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 186
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 187 VNEDCELKILDFGLA 201
Score = 36.2 bits (82), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 53/129 (41%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF---------------LANT 778
V T Y APE++L Y D WSVG I+ E+L G F
Sbjct: 212 VATRWYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTP 271
Query: 779 SAETQYKVINWESCLHIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
A ++ + E+ +I + Q+ +P DL+ + L DKR+ AS
Sbjct: 272 PASVISRMPSHEARNYINSLPQMPKRNFADVFIGANPLAVDLLEKMLVLDTDKRI--TAS 329
Query: 826 EVKAHPFFS 834
E AHP+FS
Sbjct: 330 EALAHPYFS 338
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 100 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 158 VNEDCELKILDFGLA 172
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 243 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 300
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 301 QALAHAYFA 309
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 100 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 158 VNEDCELKILDFGLA 172
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 55/131 (41%), Gaps = 31/131 (23%)
Query: 733 SLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LAN 777
V T Y APE++L Y Q D WSVG I+ E+L G F L
Sbjct: 181 GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 778 TSAETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKN 823
T K I+ ES +I + Q+ +P DL+ + L +DKR+
Sbjct: 241 TPGAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--T 298
Query: 824 ASEVKAHPFFS 834
A++ AH +F+
Sbjct: 299 AAQALAHAYFA 309
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 110 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 167
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 168 VNEDCELKILDFGLA 182
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 193 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 252
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + AQ+ +P DL+ + L +DKR+ A+
Sbjct: 253 GAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 310
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 311 QALAHAYFA 319
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 123 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 180
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 181 VNEDCELKILDFGLA 195
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 265
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 266 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 323
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 324 QALAHAYFA 332
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 100 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 158 VNEDCELKILDFGLA 172
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 243 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 300
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 301 QALAHAYFA 309
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 100 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 158 VNEDCELKILDFGLA 172
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 56/131 (42%), Gaps = 31/131 (23%)
Query: 733 SLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LAN 777
V T Y APE++L Y Q D WSVG I+ E+L G F L
Sbjct: 181 GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 240
Query: 778 TSAETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKN 823
T K I+ ES +I + AQ+ +P DL+ + L +DKR+
Sbjct: 241 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--T 298
Query: 824 ASEVKAHPFFS 834
A++ AH +F+
Sbjct: 299 AAQALAHAYFA 309
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 102 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 159
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 160 VNEDCELKILDFGLA 174
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 245 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 302
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 303 QALAHAYFA 311
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 106 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 163
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 164 VNEDCELKILDFGLA 178
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + AQ+ +P DL+ + L +DKR+ A+
Sbjct: 249 GAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 306
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 307 QALAHAYFA 315
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 106 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 163
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 164 VNEDCELKILDFGLA 178
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 189 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 249 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 306
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 307 QALAHAYFA 315
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 112 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 169
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 170 VNEDCELKILDFGLA 184
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 254
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 255 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 312
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 313 QALAHAYFA 321
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 100 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 158 VNEDCELKILDFGLA 172
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 243 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 300
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 301 QALAHAYFA 309
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 112 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 169
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 170 VNEDCELKILDFGLA 184
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 254
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 255 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 312
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 313 QALAHAYFA 321
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 112 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 169
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 170 VNEDCELKILDFGLA 184
Score = 37.0 bits (84), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 195 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 254
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 255 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 312
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 313 QALAHAYFA 321
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 102 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 159
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 160 VNEDCELKILDFGLA 174
Score = 37.0 bits (84), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 185 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 245 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 302
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 303 QALAHAYFA 311
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 111 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 168
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 169 VNEDCELKILDFGLA 183
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 194 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 253
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 254 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 311
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 312 QALAHAYFA 320
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 105 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 162
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 163 VNEDCELKILDFGLA 177
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 188 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 248 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 305
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 306 QALAHAYFA 314
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 100 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 158 VNEDCELKILDFGLA 172
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 243 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 300
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 301 QALAHAYFA 309
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 119 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 176
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 177 VNEDCELKILDFGLA 191
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 261
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 262 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 319
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 320 QALAHAYFA 328
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 100 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 158 VNEDCELKILDFGLA 172
Score = 37.0 bits (84), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 243 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 300
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 301 QALAHAYFA 309
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 120 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 177
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 178 VNEDCELKILDFGLA 192
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + AQ+ +P DL+ + L +DKR+ A+
Sbjct: 263 GAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 320
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 321 QALAHAYFA 329
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 120 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 177
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 178 VNEDCELKILDFGLA 192
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + AQ+ +P DL+ + L +DKR+ A+
Sbjct: 263 GAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 320
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 321 QALAHAYFA 329
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 96 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 153
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 154 VNEDCELKILDFGLA 168
Score = 37.0 bits (84), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 239 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 296
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 297 QALAHAYFA 305
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 97 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 154
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 155 VNEDCELKILDFGLA 169
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 239
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 240 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 297
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 298 QALAHAYFA 306
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 119 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 176
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 177 VNEDCELKILDFGLA 191
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 202 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 261
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + AQ+ +P DL+ + L +DKR+ A+
Sbjct: 262 GAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 319
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 320 QALAHAYFA 328
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 120 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 177
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 178 VNEDCELKILDFGLA 192
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 203 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 263 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 320
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 321 QALAHAYFA 329
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 733 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAE 781
++V T +Y PEV+L G+ Q CD WS+G IL+E G F + + E
Sbjct: 207 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 255
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 45.8 bits (107), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 96 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 153
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 154 VNEDCELKILDFGLA 168
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 56/129 (43%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 179 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + AQ+ +P DL+ + L +DKR+ A+
Sbjct: 239 GAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 296
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 297 QALAHAYFA 305
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 97 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 154
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 155 VNEDCELKILDFGLA 169
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 180 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 239
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 240 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 297
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 298 QALAHAYFA 306
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 98 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 155
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 156 VNEDCELKILDFGLA 170
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 181 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 240
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 241 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 298
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 299 QALAHAYFA 307
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Query: 546 GEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKG----SPHNNLYFVM 601
GEV V+K+ + ++ + E+ +++ + +++ KG + NL +M
Sbjct: 38 GEVVAVKKLQHSTEEHLRDFER------EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 91
Query: 602 DYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH 660
+Y+P G L L K K + Y +++ +E + +IHRD+ NIL++ +
Sbjct: 92 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 151
Query: 661 IKLTDFGL 668
+K+ DFGL
Sbjct: 152 VKIGDFGL 159
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Query: 546 GEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKG----SPHNNLYFVM 601
GEV V+K+ + ++ + E+ +++ + +++ KG + NL +M
Sbjct: 44 GEVVAVKKLQHSTEEHLRDFER------EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 97
Query: 602 DYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH 660
+Y+P G L L K K + Y +++ +E + +IHRD+ NIL++ +
Sbjct: 98 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 157
Query: 661 IKLTDFGL 668
+K+ DFGL
Sbjct: 158 VKIGDFGL 165
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Query: 546 GEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKG----SPHNNLYFVM 601
GEV V+K+ + ++ + E+ +++ + +++ KG + NL +M
Sbjct: 46 GEVVAVKKLQHSTEEHLRDFER------EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 99
Query: 602 DYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH 660
+Y+P G L L K K + Y +++ +E + +IHRD+ NIL++ +
Sbjct: 100 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 159
Query: 661 IKLTDFGL 668
+K+ DFGL
Sbjct: 160 VKIGDFGL 167
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Query: 574 EVTLVRKI-DTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELT 632
EV ++RK N L M S L V + G L L E IA T
Sbjct: 58 EVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQT 117
Query: 633 C-AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT-GFRWTHNSKYYQSNG 685
++ +H IHRD+K +NI + D +K+ DFGL T RW+ + ++ Q +G
Sbjct: 118 ARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSG 172
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Query: 546 GEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKG----SPHNNLYFVM 601
GEV V+K+ + ++ + E+ +++ + +++ KG + NL +M
Sbjct: 37 GEVVAVKKLQHSTEEHLRDFER------EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 90
Query: 602 DYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH 660
+Y+P G L L K K + Y +++ +E + +IHRD+ NIL++ +
Sbjct: 91 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 150
Query: 661 IKLTDFGL 668
+K+ DFGL
Sbjct: 151 VKIGDFGL 158
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 16/157 (10%)
Query: 526 KIDTNHLYVMKTIYKCVGVFGEVTLVR----KIDTNHLYVMKTIYKCVGAF-----GEVT 576
+ + HL ++ + K G FG V + R + +T + +K + E+
Sbjct: 10 QFEERHLKFLQQLGK--GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 67
Query: 577 LVRKIDTNHLYVMKG----SPHNNLYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAEL 631
+++ + +++ KG + NL +M+Y+P G L L K K + Y +++
Sbjct: 68 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 127
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
+E + +IHRD+ NIL++ + +K+ DFGL
Sbjct: 128 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL 164
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Query: 546 GEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKG----SPHNNLYFVM 601
GEV V+K+ + ++ + E+ +++ + +++ KG + NL +M
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFER------EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 92
Query: 602 DYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH 660
+Y+P G L L K K + Y +++ +E + +IHRD+ NIL++ +
Sbjct: 93 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 152
Query: 661 IKLTDFGL 668
+K+ DFGL
Sbjct: 153 VKIGDFGL 160
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 123 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 180
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 181 VNEDCELKILDFGLA 195
Score = 37.0 bits (84), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 206 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 265
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 266 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 323
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 324 QALAHAYFA 332
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 96 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 153
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DFGL
Sbjct: 154 VNEDCELKILDFGLA 168
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 56/131 (42%), Gaps = 31/131 (23%)
Query: 733 SLVGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LAN 777
V T Y APE++L Y Q D WSVG I+ E+L G F L
Sbjct: 177 GFVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVG 236
Query: 778 TSAETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKN 823
T K I+ ES +I + AQ+ +P DL+ + L +DKR+
Sbjct: 237 TPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--T 294
Query: 824 ASEVKAHPFFS 834
A++ AH +F+
Sbjct: 295 AAQALAHAYFA 305
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 73/157 (46%), Gaps = 16/157 (10%)
Query: 526 KIDTNHLYVMKTIYKCVGVFGEVTLVR----KIDTNHLYVMKTIYKCVGAF-----GEVT 576
+ + HL ++ + K G FG V + R + +T + +K + E+
Sbjct: 9 QFEERHLKFLQQLGK--GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 66
Query: 577 LVRKIDTNHLYVMKG----SPHNNLYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAEL 631
+++ + +++ KG + NL +M+Y+P G L L K K + Y +++
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQI 126
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
+E + +IHRD+ NIL++ + +K+ DFGL
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL 163
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Query: 546 GEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKG----SPHNNLYFVM 601
GEV V+K+ + ++ + E+ +++ + +++ KG + NL +M
Sbjct: 39 GEVVAVKKLQHSTEEHLRDFER------EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 92
Query: 602 DYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH 660
+Y+P G L L K K + Y +++ +E + +IHRD+ NIL++ +
Sbjct: 93 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 152
Query: 661 IKLTDFGL 668
+K+ DFGL
Sbjct: 153 VKIGDFGL 160
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 733 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAE 781
++V T +Y PEV+L G+ Q CD WS+G IL+E G F + + E
Sbjct: 198 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 246
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/254 (21%), Positives = 98/254 (38%), Gaps = 77/254 (30%)
Query: 527 IDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCV-------GAFGEVTLVR 579
++ L +++TI K G FG+V L K KC+ E +++
Sbjct: 9 LNMKELKLLQTIGK--GEFGDVML------GDYRGNKVAVKCIKNDATAQAFLAEASVMT 60
Query: 580 KIDTNHLYVMKG---SPHNNLYFVMDYIPGGDLMSLLIKKG---IFEEPLARFYIAELTC 633
++ ++L + G LY V +Y+ G L+ L +G + + L +F + ++
Sbjct: 61 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-DVCE 119
Query: 634 AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSM 693
A+E + F+HRD+ N+L+ D K++DFGL +K S D G+
Sbjct: 120 AMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL---------TKEASSTQDTGKL--- 167
Query: 694 EPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 753
P+K + APE L ++
Sbjct: 168 --------------------PVK-----------------------WTAPEALREAAFST 184
Query: 754 LCDWWSVGVILYEM 767
D WS G++L+E+
Sbjct: 185 KSDVWSFGILLWEI 198
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Query: 546 GEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKG----SPHNNLYFVM 601
GEV V+K+ + ++ + E+ +++ + +++ KG + NL +M
Sbjct: 45 GEVVAVKKLQHSTEEHLRDFER------EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 98
Query: 602 DYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH 660
+Y+P G L L K K + Y +++ +E + +IHRD+ NIL++ +
Sbjct: 99 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 158
Query: 661 IKLTDFGL 668
+K+ DFGL
Sbjct: 159 VKIGDFGL 166
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 733 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAE 781
++V T +Y PEV+L G+ Q CD WS+G IL+E G F + + E
Sbjct: 230 TIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQTHENRE 278
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Query: 574 EVTLVRKI-DTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELT 632
EV ++RK N L M S L V + G L L E IA T
Sbjct: 70 EVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQT 129
Query: 633 C-AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT-GFRWTHNSKYYQSNG 685
++ +H IHRD+K +NI + D +K+ DFGL T RW+ + ++ Q +G
Sbjct: 130 ARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG 184
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 3/115 (2%)
Query: 574 EVTLVRKI-DTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELT 632
EV ++RK N L M S L V + G L L E IA T
Sbjct: 70 EVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQT 129
Query: 633 C-AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT-GFRWTHNSKYYQSNG 685
++ +H IHRD+K +NI + D +K+ DFGL T RW+ + ++ Q +G
Sbjct: 130 ARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSG 184
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Query: 546 GEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKG----SPHNNLYFVM 601
GEV V+K+ + ++ + E+ +++ + +++ KG + NL +M
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFER------EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 110
Query: 602 DYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH 660
+Y+P G L L K K + Y +++ +E + +IHRD+ NIL++ +
Sbjct: 111 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 170
Query: 661 IKLTDFGL 668
+K+ DFGL
Sbjct: 171 VKIGDFGL 178
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/128 (25%), Positives = 63/128 (49%), Gaps = 11/128 (8%)
Query: 546 GEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKG----SPHNNLYFVM 601
GEV V+K+ + ++ + E+ +++ + +++ KG + NL +M
Sbjct: 57 GEVVAVKKLQHSTEEHLRDFER------EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 110
Query: 602 DYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH 660
+Y+P G L L K K + Y +++ +E + +IHRD+ NIL++ +
Sbjct: 111 EYLPYGSLRDYLQKHKERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 170
Query: 661 IKLTDFGL 668
+K+ DFGL
Sbjct: 171 VKIGDFGL 178
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/102 (29%), Positives = 51/102 (50%), Gaps = 4/102 (3%)
Query: 571 AFGEVTLVRKIDTNHLYVMKGSPHN--NLYFVMDYIPGGDLMSLLIKKG-IFEEPLARFY 627
A EV+L++ + ++ + H +L V +Y+ DL L G I + +
Sbjct: 47 AIREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDCGNIINMHNVKLF 105
Query: 628 IAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
+ +L + H+ +HRD+KP N+LI+ G +KL DFGL
Sbjct: 106 LFQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLA 147
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 52/124 (41%), Gaps = 34/124 (27%)
Query: 740 YIAPEVLL-RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAET---------------- 782
Y P++LL T Y+ D W VG I YEM G P F +T E
Sbjct: 166 YRPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETW 225
Query: 783 -------QYKVINW-----ESCL-HIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKA 829
++K N+ E+ L H P +L +GADL+ +L + R +A +
Sbjct: 226 PGILSNEEFKTYNYPKYRAEALLSHAP---RLDSDGADLLTKLLQ-FEGRNRISAEDAMK 281
Query: 830 HPFF 833
HPFF
Sbjct: 282 HPFF 285
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 22/155 (14%)
Query: 527 IDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCV-------GAFGEVTLVR 579
++ L +++TI K G FG+V L K KC+ E +++
Sbjct: 18 LNMKELKLLQTIGK--GEFGDVML------GDYRGNKVAVKCIKNDATAQAFLAEASVMT 69
Query: 580 KIDTNHLYVMKG---SPHNNLYFVMDYIPGGDLMSLLIKKG---IFEEPLARFYIAELTC 633
++ ++L + G LY V +Y+ G L+ L +G + + L +F + ++
Sbjct: 70 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-DVCE 128
Query: 634 AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
A+E + F+HRD+ N+L+ D K++DFGL
Sbjct: 129 AMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL 163
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 626 FYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC----TGFRWTHN--SK 679
+ + ++ ++ +H G IHRD+KP NI++ D +K+ DFGL T F T ++
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 680 YYQS 683
YY++
Sbjct: 190 YYRA 193
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
V T Y APEV+L GY + D WSVG I+ EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 22/155 (14%)
Query: 527 IDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCV-------GAFGEVTLVR 579
++ L +++TI K G FG+V L K KC+ E +++
Sbjct: 3 LNMKELKLLQTIGK--GEFGDVML------GDYRGNKVAVKCIKNDATAQAFLAEASVMT 54
Query: 580 KIDTNHLYVMKG---SPHNNLYFVMDYIPGGDLMSLLIKKG---IFEEPLARFYIAELTC 633
++ ++L + G LY V +Y+ G L+ L +G + + L +F + ++
Sbjct: 55 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-DVCE 113
Query: 634 AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
A+E + F+HRD+ N+L+ D K++DFGL
Sbjct: 114 AMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL 148
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 71/179 (39%), Gaps = 36/179 (20%)
Query: 516 GAFGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNH---LYVMKTIYKCVGAF 572
G+FGE+ L I TN +K + + T H LY K IY+ +
Sbjct: 18 GSFGEIYLGTNIQTNEEVAIK--------------LENVKTKHPQLLYESK-IYRILQGG 62
Query: 573 GEVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGG--DLMSLLIKKGIFEEPLARFYIAE 630
+ VR Y + VMD + DL + +K + L +
Sbjct: 63 TGIPNVRWFGVEGDYNV---------LVMDLLGPSLEDLFNFCSRKLSLKTVL--MLADQ 111
Query: 631 LTCAVESVHKMGFIHRDIKPDNILID---RDGHIKLTDFGLCTGFR--WTHNSKYYQSN 684
+ VE VH F+HRDIKPDN L+ R + + DFGL +R TH Y+ N
Sbjct: 112 MINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYREN 170
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 94/253 (37%), Gaps = 67/253 (26%)
Query: 574 EVTLVRKI-DTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELT 632
EV ++RK N L M S L V + G L L E + IA T
Sbjct: 81 EVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 140
Query: 633 C-AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT-GFRWTHNSKYYQSNGDHGRQ 690
++ +H IHRD+K +NI + D +K+ DFGL T RW+ + ++ Q
Sbjct: 141 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ-------- 192
Query: 691 DSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL--- 747
L G+ ++APEV+
Sbjct: 193 -------------------------------------------LSGSILWMAPEVIRMQD 209
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGAD 807
+ Y+ D ++ G++LYE++ G P+ + N + + + LSP+ +
Sbjct: 210 KNPYSFQSDVYAFGIVLYELMTGQLPY---------SNINNRDQIIFMVGRGYLSPDLSK 260
Query: 808 LILQLCTGADKRL 820
+ C A KRL
Sbjct: 261 -VRSNCPKAMKRL 272
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/155 (25%), Positives = 72/155 (46%), Gaps = 22/155 (14%)
Query: 527 IDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCV-------GAFGEVTLVR 579
++ L +++TI K G FG+V L K KC+ E +++
Sbjct: 190 LNMKELKLLQTIGK--GEFGDVML------GDYRGNKVAVKCIKNDATAQAFLAEASVMT 241
Query: 580 KIDTNHLYVMKG---SPHNNLYFVMDYIPGGDLMSLLIKKG---IFEEPLARFYIAELTC 633
++ ++L + G LY V +Y+ G L+ L +G + + L +F + ++
Sbjct: 242 QLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSL-DVCE 300
Query: 634 AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
A+E + F+HRD+ N+L+ D K++DFGL
Sbjct: 301 AMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGL 335
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 45.1 bits (105), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 94/253 (37%), Gaps = 67/253 (26%)
Query: 574 EVTLVRKI-DTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELT 632
EV ++RK N L M S L V + G L L E + IA T
Sbjct: 74 EVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 133
Query: 633 C-AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT-GFRWTHNSKYYQSNGDHGRQ 690
++ +H IHRD+K +NI + D +K+ DFGL T RW+ + ++ Q
Sbjct: 134 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ-------- 185
Query: 691 DSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL--- 747
L G+ ++APEV+
Sbjct: 186 -------------------------------------------LSGSILWMAPEVIRMQD 202
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGAD 807
+ Y+ D ++ G++LYE++ G P+ + N + + + LSP+ +
Sbjct: 203 KNPYSFQSDVYAFGIVLYELMTGQLPY---------SNINNRDQIIFMVGRGYLSPDLSK 253
Query: 808 LILQLCTGADKRL 820
+ C A KRL
Sbjct: 254 -VRSNCPKAMKRL 265
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 626 FYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC----TGFRWTHN--SK 679
+ + ++ ++ +H G IHRD+KP NI++ D +K+ DFGL T F T ++
Sbjct: 130 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR 189
Query: 680 YYQS 683
YY++
Sbjct: 190 YYRA 193
Score = 36.6 bits (83), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
V T Y APEV+L GY + D WSVG I+ EM+
Sbjct: 186 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 6/64 (9%)
Query: 626 FYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC----TGFRWTHN--SK 679
+ + ++ ++ +H G IHRD+KP NI++ D +K+ DFGL T F T ++
Sbjct: 123 YLLYQMLXGIKHLHSAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTR 182
Query: 680 YYQS 683
YY++
Sbjct: 183 YYRA 186
Score = 36.6 bits (83), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 18/34 (52%), Positives = 22/34 (64%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML 768
V T Y APEV+L GY + D WSVG I+ EM+
Sbjct: 179 VVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 94/253 (37%), Gaps = 67/253 (26%)
Query: 574 EVTLVRKI-DTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELT 632
EV ++RK N L M S L V + G L L E + IA T
Sbjct: 82 EVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 141
Query: 633 C-AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT-GFRWTHNSKYYQSNGDHGRQ 690
++ +H IHRD+K +NI + D +K+ DFGL T RW+ + ++ Q
Sbjct: 142 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ-------- 193
Query: 691 DSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL--- 747
L G+ ++APEV+
Sbjct: 194 -------------------------------------------LSGSILWMAPEVIRMQD 210
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGAD 807
+ Y+ D ++ G++LYE++ G P+ + N + + + LSP+ +
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPY---------SNINNRDQIIFMVGRGYLSPDLSK 261
Query: 808 LILQLCTGADKRL 820
+ C A KRL
Sbjct: 262 -VRSNCPKAMKRL 273
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 94/253 (37%), Gaps = 67/253 (26%)
Query: 574 EVTLVRKI-DTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELT 632
EV ++RK N L M S L V + G L L E + IA T
Sbjct: 82 EVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 141
Query: 633 C-AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT-GFRWTHNSKYYQSNGDHGRQ 690
++ +H IHRD+K +NI + D +K+ DFGL T RW+ + ++ Q
Sbjct: 142 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ-------- 193
Query: 691 DSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL--- 747
L G+ ++APEV+
Sbjct: 194 -------------------------------------------LSGSILWMAPEVIRMQD 210
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGAD 807
+ Y+ D ++ G++LYE++ G P+ + N + + + LSP+ +
Sbjct: 211 KNPYSFQSDVYAFGIVLYELMTGQLPY---------SNINNRDQIIFMVGRGYLSPDLSK 261
Query: 808 LILQLCTGADKRL 820
+ C A KRL
Sbjct: 262 -VRSNCPKAMKRL 273
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 623 LARFYIAELTCAVESVHKMGFIHRDIKPDNILID-RDGHIKLTDFG 667
L + Y+ +L ++ +H +G HRDIKP N+L+D G +KL DFG
Sbjct: 142 LIKLYMYQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFG 187
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 48/124 (38%), Gaps = 29/124 (23%)
Query: 734 LVGTPN--------YIAPEVLL-RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQY 784
+ G PN Y APE++ T YT D WS G ++ E++ G P F + +
Sbjct: 193 IAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLV 252
Query: 785 KVINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPFFSNVDFEKGVRT 844
++I L P+ Q+ T + +++ HP F K R
Sbjct: 253 EII---KVLGTPSREQIK-----------TMNPNYMEHKFPQIRPHP------FSKVFRP 292
Query: 845 LTPP 848
TPP
Sbjct: 293 RTPP 296
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDR 657
+ VM+ +PG L+S ++ G EE + L ++ ++ K GF H D++P N+++D
Sbjct: 318 WLVMEKLPG-RLLSDMLAAG--EEIDREKILGSLLRSLAALEKQGFWHDDVRPWNVMVDA 374
Query: 658 DGHIKLTDFG 667
H +L DFG
Sbjct: 375 RQHARLIDFG 384
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDR 657
+ VM+ +PG L+S ++ G EE + L ++ ++ K GF H D++P N+++D
Sbjct: 318 WLVMEKLPG-RLLSDMLAAG--EEIDREKILGSLLRSLAALEKQGFWHDDVRPWNVMVDA 374
Query: 658 DGHIKLTDFG 667
H +L DFG
Sbjct: 375 RQHARLIDFG 384
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 73/157 (46%), Gaps = 16/157 (10%)
Query: 526 KIDTNHLYVMKTIYKCVGVFGEVTLVR----KIDTNHLYVMKTIYKCVGAF-----GEVT 576
+ + HL ++ + K G FG V + R + +T + +K + E+
Sbjct: 9 QFEERHLKFLRQLGK--GNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIE 66
Query: 577 LVRKIDTNHLYVMKG----SPHNNLYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAEL 631
+++ + +++ KG + NL +M+++P G L L K K + Y +++
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQI 126
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
+E + +IHRD+ NIL++ + +K+ DFGL
Sbjct: 127 CKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGL 163
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 597 LYFVMDYIPGGDLMSLLIKK--GIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
L+ M++ G L + K+ ++ LA ++T V+ +H IHRD+KP NI
Sbjct: 109 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIF 168
Query: 655 IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
+ +K+ DFGL T + ++ K +S G
Sbjct: 169 LVDTKQVKIGDFGLVTSLK--NDGKRTRSKG 197
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 52/146 (35%), Gaps = 54/146 (36%)
Query: 634 AVESVHKMGFIHRDIKPDNILI----DRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGR 689
+ +H +HRD+KP NIL+ G +K+ D G
Sbjct: 140 GIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFA-------------------- 179
Query: 690 QDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT 749
R NSPLKPL +V T Y APE+LL
Sbjct: 180 -------------------RLFNSPLKPLADLD----------PVVVTFWYRAPELLLGA 210
Query: 750 -GYTQLCDWWSVGVILYEMLVGSPPF 774
YT+ D W++G I E+L P F
Sbjct: 211 RHYTKAIDIWAIGCIFAELLTSEPIF 236
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLA--RFYIA-ELTCAVESVHKMGFIHRDIKPDNI 653
Y V +Y+P G+L+ L ++ EE A Y+A +++ A+E + K FIHRD+ N
Sbjct: 103 FYIVTEYMPYGNLLDYL-RECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNC 161
Query: 654 LIDRDGHIKLTDFGL 668
L+ + +K+ DFGL
Sbjct: 162 LVGENHVVKVADFGL 176
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 100 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ D+GL
Sbjct: 158 VNEDCELKILDYGLA 172
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 243 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 300
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 301 QALAHAYFA 309
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 94/253 (37%), Gaps = 67/253 (26%)
Query: 574 EVTLVRKI-DTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELT 632
EV ++RK N L M S L V + G L L E + IA T
Sbjct: 56 EVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 115
Query: 633 C-AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT-GFRWTHNSKYYQSNGDHGRQ 690
++ +H IHRD+K +NI + D +K+ DFGL T RW+ + ++ Q
Sbjct: 116 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ-------- 167
Query: 691 DSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL--- 747
L G+ ++APEV+
Sbjct: 168 -------------------------------------------LSGSILWMAPEVIRMQD 184
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGAD 807
+ Y+ D ++ G++LYE++ G P+ + N + + + LSP+ +
Sbjct: 185 KNPYSFQSDVYAFGIVLYELMTGQLPY---------SNINNRDQIIFMVGRGYLSPDLSK 235
Query: 808 LILQLCTGADKRL 820
+ C A KRL
Sbjct: 236 -VRSNCPKAMKRL 247
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 94/253 (37%), Gaps = 67/253 (26%)
Query: 574 EVTLVRKI-DTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELT 632
EV ++RK N L M S L V + G L L E + IA T
Sbjct: 59 EVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 118
Query: 633 C-AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT-GFRWTHNSKYYQSNGDHGRQ 690
++ +H IHRD+K +NI + D +K+ DFGL T RW+ + ++ Q
Sbjct: 119 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ-------- 170
Query: 691 DSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL--- 747
L G+ ++APEV+
Sbjct: 171 -------------------------------------------LSGSILWMAPEVIRMQD 187
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGAD 807
+ Y+ D ++ G++LYE++ G P+ + N + + + LSP+ +
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPY---------SNINNRDQIIFMVGRGYLSPDLSK 238
Query: 808 LILQLCTGADKRL 820
+ C A KRL
Sbjct: 239 -VRSNCPKAMKRL 250
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLH 794
GT + APEV D WSVGV+ Y +L G PF ET V + + +
Sbjct: 211 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 270
Query: 795 IPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPFFS 834
A + +S +G D I +L AD + HP+ +
Sbjct: 271 DSAFSGISEDGKDFIRKLLL-ADPNTRMTIHQALEHPWLT 309
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKK-GIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
N + + +++ GG+L + + E A Y+ ++ + +H+ ++H D+KP+NI
Sbjct: 121 NEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENI 180
Query: 654 LI--DRDGHIKLTDFGLC 669
+ R +KL DFGL
Sbjct: 181 MFTTKRSNELKLIDFGLT 198
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 94/253 (37%), Gaps = 67/253 (26%)
Query: 574 EVTLVRKI-DTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELT 632
EV ++RK N L M S L V + G L L E + IA T
Sbjct: 59 EVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 118
Query: 633 C-AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT-GFRWTHNSKYYQSNGDHGRQ 690
++ +H IHRD+K +NI + D +K+ DFGL T RW+ + ++ Q
Sbjct: 119 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ-------- 170
Query: 691 DSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL--- 747
L G+ ++APEV+
Sbjct: 171 -------------------------------------------LSGSILWMAPEVIRMQD 187
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGAD 807
+ Y+ D ++ G++LYE++ G P+ + N + + + LSP+ +
Sbjct: 188 KNPYSFQSDVYAFGIVLYELMTGQLPY---------SNINNRDQIIFMVGRGYLSPDLSK 238
Query: 808 LILQLCTGADKRL 820
+ C A KRL
Sbjct: 239 -VRSNCPKAMKRL 250
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 78/206 (37%), Gaps = 60/206 (29%)
Query: 574 EVTLVRKIDTNHLYVMKG--SPHNNLYFVMDYIPGGDLMSLL-IKKGIFEEPLA---RFY 627
E+ + K +L + G S ++L V Y P G L+ L G PL+ R
Sbjct: 71 EIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRLSCLDGT--PPLSWHXRCK 128
Query: 628 IAELTC-AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGD 686
IA+ + +H+ IHRDIK NIL+D K++DFGL
Sbjct: 129 IAQGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLA----------------- 171
Query: 687 HGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVL 746
SE+++ Q +VGT Y APE
Sbjct: 172 -------RASEKFA--------------------------QXVXXSRIVGTTAYXAPEA- 197
Query: 747 LRTGYTQLCDWWSVGVILYEMLVGSP 772
LR T D +S GV+L E++ G P
Sbjct: 198 LRGEITPKSDIYSFGVVLLEIITGLP 223
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 44.3 bits (103), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 94/253 (37%), Gaps = 67/253 (26%)
Query: 574 EVTLVRKI-DTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELT 632
EV ++RK N L M S L V + G L L E + IA T
Sbjct: 54 EVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 113
Query: 633 C-AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT-GFRWTHNSKYYQSNGDHGRQ 690
++ +H IHRD+K +NI + D +K+ DFGL T RW+ + ++ Q
Sbjct: 114 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQ-------- 165
Query: 691 DSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL--- 747
L G+ ++APEV+
Sbjct: 166 -------------------------------------------LSGSILWMAPEVIRMQD 182
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGAD 807
+ Y+ D ++ G++LYE++ G P+ + N + + + LSP+ +
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPY---------SNINNRDQIIFMVGRGYLSPDLSK 233
Query: 808 LILQLCTGADKRL 820
+ C A KRL
Sbjct: 234 -VRSNCPKAMKRL 245
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 94/253 (37%), Gaps = 67/253 (26%)
Query: 574 EVTLVRKI-DTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELT 632
EV ++RK N L M S L V + G L L E + IA T
Sbjct: 54 EVGVLRKTRHVNILLFMGYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 113
Query: 633 C-AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT-GFRWTHNSKYYQSNGDHGRQ 690
++ +H IHRD+K +NI + D +K+ DFGL T RW+ + ++ Q
Sbjct: 114 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ-------- 165
Query: 691 DSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL--- 747
L G+ ++APEV+
Sbjct: 166 -------------------------------------------LSGSILWMAPEVIRMQD 182
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGAD 807
+ Y+ D ++ G++LYE++ G P+ + N + + + LSP+ +
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPY---------SNINNRDQIIFMVGRGYLSPDLSK 233
Query: 808 LILQLCTGADKRL 820
+ C A KRL
Sbjct: 234 -VRSNCPKAMKRL 245
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/100 (27%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 574 EVTLVRKIDTNHLY----VMKGSPHNNLYFVMDY-IPGGDLMSLLIKKGIFEEPLARFYI 628
E+ L+R++ ++ V+ +Y VM+Y + G M + + F A Y
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYF 115
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
+L +E +H G +H+DIKP N+L+ G +K++ G+
Sbjct: 116 CQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGV 155
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 43.9 bits (102), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 58/253 (22%), Positives = 94/253 (37%), Gaps = 67/253 (26%)
Query: 574 EVTLVRKI-DTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELT 632
EV ++RK N L M S L V + G L L E + IA T
Sbjct: 54 EVGVLRKTRHVNILLFMGYSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQT 113
Query: 633 C-AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT-GFRWTHNSKYYQSNGDHGRQ 690
++ +H IHRD+K +NI + D +K+ DFGL T RW+ + ++ Q
Sbjct: 114 AQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQ-------- 165
Query: 691 DSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL--- 747
L G+ ++APEV+
Sbjct: 166 -------------------------------------------LSGSILWMAPEVIRMQD 182
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGAD 807
+ Y+ D ++ G++LYE++ G P+ + N + + + LSP+ +
Sbjct: 183 KNPYSFQSDVYAFGIVLYELMTGQLPY---------SNINNRDQIIFMVGRGYLSPDLSK 233
Query: 808 LILQLCTGADKRL 820
+ C A KRL
Sbjct: 234 -VRSNCPKAMKRL 245
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 43/100 (43%), Gaps = 1/100 (1%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLH 794
GT + APEV D WSVGV+ Y +L G PF ET V + + +
Sbjct: 317 TGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMD 376
Query: 795 IPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPFFS 834
A + +S +G D I +L AD + HP+ +
Sbjct: 377 DSAFSGISEDGKDFIRKLLL-ADPNTRMTIHQALEHPWLT 415
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 41/78 (52%), Gaps = 3/78 (3%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKK-GIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
N + + +++ GG+L + + E A Y+ ++ + +H+ ++H D+KP+NI
Sbjct: 227 NEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENI 286
Query: 654 LI--DRDGHIKLTDFGLC 669
+ R +KL DFGL
Sbjct: 287 MFTTKRSNELKLIDFGLT 304
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/128 (23%), Positives = 62/128 (48%), Gaps = 11/128 (8%)
Query: 546 GEVTLVRKIDTNHLYVMKTIYKCVGAFGEVTLVRKIDTNHLYVMKG----SPHNNLYFVM 601
GEV V+K+ + ++ + E+ +++ + +++ KG + NL +M
Sbjct: 42 GEVVAVKKLQHSTEEHLRDFER------EIEILKSLQHDNIVKYKGVCYSAGRRNLKLIM 95
Query: 602 DYIPGGDLMSLLIKKGIFEEPLARF-YIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH 660
+Y+P G L L + + Y +++ +E + +IHRD+ NIL++ +
Sbjct: 96 EYLPYGSLRDYLQAHAERIDHIKLLQYTSQICKGMEYLGTKRYIHRDLATRNILVENENR 155
Query: 661 IKLTDFGL 668
+K+ DFGL
Sbjct: 156 VKIGDFGL 163
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 43.5 bits (101), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/106 (23%), Positives = 53/106 (50%), Gaps = 11/106 (10%)
Query: 573 GEVTLVRKIDTNHLYVMKG--SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFY-IA 629
E+ ++ I + +G + ++ +Y + +Y+ ++ + ++ F I
Sbjct: 92 NELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQ 151
Query: 630 ELTCAVESV--------HKMGFIHRDIKPDNILIDRDGHIKLTDFG 667
+ C ++SV ++ HRD+KP NIL+D++G +KL+DFG
Sbjct: 152 VIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFG 197
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 48/89 (53%), Gaps = 6/89 (6%)
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDR 657
Y VM+Y+ G L +K E +A Y+ E+ A+ +H +G ++ D+KP+NI++
Sbjct: 160 YIVMEYVGGQSLKRSKGQKLPVAEAIA--YLLEILPALSYLHSIGLVYNDLKPENIMLTE 217
Query: 658 DGHIKLTDFGLCT---GFRWTHNSKYYQS 683
+ +KL D G + F + + + +Q+
Sbjct: 218 E-QLKLIDLGAVSRINSFGYLYGTPGFQA 245
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 18/92 (19%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKM--------------- 641
LY ++Y P G+L+ L K + E A F IA T + S ++
Sbjct: 91 LYLAIEYAPHGNLLDFLRKSRVLETDPA-FAIANSTASTLSSQQLLHFAADVARGMDYLS 149
Query: 642 --GFIHRDIKPDNILIDRDGHIKLTDFGLCTG 671
FIHRD+ NIL+ + K+ DFGL G
Sbjct: 150 QKQFIHRDLAARNILVGENYVAKIADFGLSRG 181
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 740 YIAPEVLLRTGYTQLCDWWSVGVILYEML-VGSPPFLANTSAETQYKV 786
++A E L + YT D WS GV+L+E++ +G P+ T AE K+
Sbjct: 197 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 244
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 43.5 bits (101), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 41/92 (44%), Gaps = 18/92 (19%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKM--------------- 641
LY ++Y P G+L+ L K + E A F IA T + S ++
Sbjct: 101 LYLAIEYAPHGNLLDFLRKSRVLETDPA-FAIANSTASTLSSQQLLHFAADVARGMDYLS 159
Query: 642 --GFIHRDIKPDNILIDRDGHIKLTDFGLCTG 671
FIHRD+ NIL+ + K+ DFGL G
Sbjct: 160 QKQFIHRDLAARNILVGENYVAKIADFGLSRG 191
Score = 32.3 bits (72), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 740 YIAPEVLLRTGYTQLCDWWSVGVILYEML-VGSPPFLANTSAETQYKV 786
++A E L + YT D WS GV+L+E++ +G P+ T AE K+
Sbjct: 207 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 254
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDR 657
+ VM+ +PG L+S ++ G EE + L ++ ++ K GF H D++P N+++D
Sbjct: 318 WLVMEKLPG-RLLSDMLAAG--EEIDREKILGSLLRSLAALEKKGFWHDDVRPWNVMVDA 374
Query: 658 DGHIKLTDFG 667
H +L DFG
Sbjct: 375 RQHARLIDFG 384
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 43.1 bits (100), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 100 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ FGL
Sbjct: 158 VNEDCELKILGFGLA 172
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 243 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 300
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 301 QALAHAYFA 309
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 43.1 bits (100), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 72/164 (43%), Gaps = 26/164 (15%)
Query: 523 LVRKIDTNHLYVMKTIYKCVGVFGEVTLVR---------KIDTNHLYVMKTIYKCVGAFG 573
+++D ++ + K + G FGEV R + L V T + G
Sbjct: 38 FAKELDATNISIDKVV--GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 574 EVTLVRKIDTNHLYVMKG--SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
E +++ + D ++ ++G + + V +Y+ G L S L K A+F + +L
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQL 149
Query: 632 TCAVESV-------HKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
+ + MGF+HRD+ NILI+ + K++DFGL
Sbjct: 150 VGMLRGIASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGL 193
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 24/42 (57%)
Query: 627 YIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
Y+ + A+ +H G +H D+KP NI + G KL DFGL
Sbjct: 162 YLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGL 203
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 15/105 (14%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAE--- 630
E+ + +++ ++ + G+ N + VM+Y GG L ++L EPL + A
Sbjct: 52 ELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHGA----EPLPYYTAAHAMS 107
Query: 631 --LTCA--VESVHKM---GFIHRDIKPDNILIDRDGHI-KLTDFG 667
L C+ V +H M IHRD+KP N+L+ G + K+ DFG
Sbjct: 108 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG 152
Score = 36.6 bits (83), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 736 GTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
G+ ++APEV + Y++ CD +S G+IL+E++ PF
Sbjct: 166 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 204
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 100 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ D GL
Sbjct: 158 VNEDCELKILDAGLA 172
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 243 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 300
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 301 QALAHAYFA 309
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 53/105 (50%), Gaps = 15/105 (14%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAE--- 630
E+ + +++ ++ + G+ N + VM+Y GG L ++L EPL + A
Sbjct: 51 ELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHGA----EPLPYYTAAHAMS 106
Query: 631 --LTCA--VESVHKM---GFIHRDIKPDNILIDRDGHI-KLTDFG 667
L C+ V +H M IHRD+KP N+L+ G + K+ DFG
Sbjct: 107 WCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFG 151
Score = 36.6 bits (83), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 26/39 (66%)
Query: 736 GTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPF 774
G+ ++APEV + Y++ CD +S G+IL+E++ PF
Sbjct: 165 GSAAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPF 203
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 78/194 (40%), Gaps = 65/194 (33%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL------TC-AVESVHKMGFIHRDIK 649
++ + +Y+ G L++ L E RF +L C A+E + F+HRD+
Sbjct: 79 IFIITEYMANGCLLNYL------REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 132
Query: 650 PDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECR 709
N L++ G +K++DFGL R+ + +Y S G
Sbjct: 133 ARNCLVNDQGVVKVSDFGLS---RYVLDDEYTSSRGS----------------------- 166
Query: 710 CINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML- 768
P++ + PEVL+ + ++ D W+ GV+++E+
Sbjct: 167 --KFPVR-----------------------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
Query: 769 VGSPPFLANTSAET 782
+G P+ T++ET
Sbjct: 202 LGKMPYERFTNSET 215
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 58/150 (38%), Gaps = 58/150 (38%)
Query: 631 LTCAVESVHKMGF------IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSN 684
++CA + M + IHRD+ N+L+ D +K+ DFGL R H+ YY+
Sbjct: 146 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA---RDIHHIDYYKKT 202
Query: 685 GDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPE 744
+ GR P+K ++APE
Sbjct: 203 TN-GRL-----------------------PVK-----------------------WMAPE 215
Query: 745 VLLRTGYTQLCDWWSVGVILYEM--LVGSP 772
L YT D WS GV+L+E+ L GSP
Sbjct: 216 ALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 245
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/207 (23%), Positives = 77/207 (37%), Gaps = 57/207 (27%)
Query: 574 EVTLVRKI-DTNHLYVMKGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELT 632
EV ++RK N L M +NL V + G L L + + IA T
Sbjct: 82 EVAVLRKTRHVNILLFMGYMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQT 141
Query: 633 C-AVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCT-GFRWTHNSKYYQSNGDHGRQ 690
++ +H IHRD+K +NI + +K+ DFGL T RW+ G Q
Sbjct: 142 AQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWS------------GSQ 189
Query: 691 DSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL--- 747
+P+ G+ ++APEV+
Sbjct: 190 QVEQPT---------------------------------------GSVLWMAPEVIRMQD 210
Query: 748 RTGYTQLCDWWSVGVILYEMLVGSPPF 774
++ D +S G++LYE++ G P+
Sbjct: 211 NNPFSFQSDVYSYGIVLYELMTGELPY 237
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 58/150 (38%), Gaps = 58/150 (38%)
Query: 631 LTCAVESVHKMGF------IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSN 684
++CA + M + IHRD+ N+L+ D +K+ DFGL R H+ YY+
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA---RDIHHIDYYKKT 209
Query: 685 GDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPE 744
+ GR P+K ++APE
Sbjct: 210 TN-GRL-----------------------PVK-----------------------WMAPE 222
Query: 745 VLLRTGYTQLCDWWSVGVILYEM--LVGSP 772
L YT D WS GV+L+E+ L GSP
Sbjct: 223 ALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 58/150 (38%), Gaps = 58/150 (38%)
Query: 631 LTCAVESVHKMGF------IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSN 684
++CA + M + IHRD+ N+L+ D +K+ DFGL R H+ YY+
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA---RDIHHIDYYKKT 209
Query: 685 GDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPE 744
+ GR P+K ++APE
Sbjct: 210 TN-GRL-----------------------PVK-----------------------WMAPE 222
Query: 745 VLLRTGYTQLCDWWSVGVILYEM--LVGSP 772
L YT D WS GV+L+E+ L GSP
Sbjct: 223 ALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 58/150 (38%), Gaps = 58/150 (38%)
Query: 631 LTCAVESVHKMGF------IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSN 684
++CA + M + IHRD+ N+L+ D +K+ DFGL R H+ YY+
Sbjct: 194 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA---RDIHHIDYYKKT 250
Query: 685 GDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPE 744
+GR P+K ++APE
Sbjct: 251 -TNGRL-----------------------PVK-----------------------WMAPE 263
Query: 745 VLLRTGYTQLCDWWSVGVILYEM--LVGSP 772
L YT D WS GV+L+E+ L GSP
Sbjct: 264 ALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 293
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 100 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ DF L
Sbjct: 158 VNEDCELKILDFYLA 172
Score = 37.0 bits (84), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 243 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 300
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 301 QALAHAYFA 309
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 58/150 (38%), Gaps = 58/150 (38%)
Query: 631 LTCAVESVHKMGF------IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSN 684
++CA + M + IHRD+ N+L+ D +K+ DFGL R H+ YY+
Sbjct: 142 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA---RDIHHIDYYKKT 198
Query: 685 GDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPE 744
+ GR P+K ++APE
Sbjct: 199 TN-GRL-----------------------PVK-----------------------WMAPE 211
Query: 745 VLLRTGYTQLCDWWSVGVILYEM--LVGSP 772
L YT D WS GV+L+E+ L GSP
Sbjct: 212 ALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 241
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 100 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ D GL
Sbjct: 158 VNEDCELKILDRGLA 172
Score = 37.0 bits (84), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 243 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 300
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 301 QALAHAYFA 309
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 42/75 (56%), Gaps = 2/75 (2%)
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
N++Y V ++ G DL ++ +K + +F I ++ ++ +H IHRD+KP N+
Sbjct: 100 NDVYLVT-HLMGADLNNI-VKCQKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLA 157
Query: 655 IDRDGHIKLTDFGLC 669
++ D +K+ D GL
Sbjct: 158 VNEDCELKILDGGLA 172
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 55/129 (42%), Gaps = 31/129 (24%)
Query: 735 VGTPNYIAPEVLLR-TGYTQLCDWWSVGVILYEMLVGSPPF--------------LANTS 779
V T Y APE++L Y Q D WSVG I+ E+L G F L T
Sbjct: 183 VATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242
Query: 780 AETQYKVINWESCL-HIPAEAQL------------SPEGADLILQ-LCTGADKRLGKNAS 825
K I+ ES +I + Q+ +P DL+ + L +DKR+ A+
Sbjct: 243 GAELLKKISSESARNYIQSLTQMPKMNFANVFIGANPLAVDLLEKMLVLDSDKRI--TAA 300
Query: 826 EVKAHPFFS 834
+ AH +F+
Sbjct: 301 QALAHAYFA 309
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 58/150 (38%), Gaps = 58/150 (38%)
Query: 631 LTCAVESVHKMGF------IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSN 684
++CA + M + IHRD+ N+L+ D +K+ DFGL R H+ YY+
Sbjct: 145 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA---RDIHHIDYYKKT 201
Query: 685 GDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPE 744
+ GR P+K ++APE
Sbjct: 202 TN-GRL-----------------------PVK-----------------------WMAPE 214
Query: 745 VLLRTGYTQLCDWWSVGVILYEM--LVGSP 772
L YT D WS GV+L+E+ L GSP
Sbjct: 215 ALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 244
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVES----VHKMGFIHRDIKPDN 652
+Y VM+Y+ G L+ L KG + L + ++ + S V +M ++HRD++ N
Sbjct: 87 IYIVMEYMSKGCLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 144
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
IL+ + K+ DFGL R +++Y G
Sbjct: 145 ILVGENLVCKVADFGLA---RLIEDNEYTARQG 174
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 58/150 (38%), Gaps = 58/150 (38%)
Query: 631 LTCAVESVHKMGF------IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSN 684
++CA + M + IHRD+ N+L+ D +K+ DFGL R H+ YY+
Sbjct: 153 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA---RDIHHIDYYKKT 209
Query: 685 GDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPE 744
+ GR P+K ++APE
Sbjct: 210 TN-GRL-----------------------PVK-----------------------WMAPE 222
Query: 745 VLLRTGYTQLCDWWSVGVILYEM--LVGSP 772
L YT D WS GV+L+E+ L GSP
Sbjct: 223 ALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 252
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 58/150 (38%), Gaps = 58/150 (38%)
Query: 631 LTCAVESVHKMGF------IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSN 684
++CA + M + IHRD+ N+L+ D +K+ DFGL R H+ YY+
Sbjct: 138 VSCAYQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLA---RDIHHIDYYKKT 194
Query: 685 GDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPE 744
+ GR P+K ++APE
Sbjct: 195 TN-GRL-----------------------PVK-----------------------WMAPE 207
Query: 745 VLLRTGYTQLCDWWSVGVILYEM--LVGSP 772
L YT D WS GV+L+E+ L GSP
Sbjct: 208 ALFDRIYTHQSDVWSFGVLLWEIFTLGGSP 237
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 46/91 (50%), Gaps = 4/91 (4%)
Query: 597 LYFVMDYIPGGDLMSLLIKK--GIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
L+ M++ G L + K+ ++ LA ++T V+ +H I+RD+KP NI
Sbjct: 95 LFIQMEFCDKGTLEQWIEKRRGEKLDKVLALELFEQITKGVDYIHSKKLINRDLKPSNIF 154
Query: 655 IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
+ +K+ DFGL T + ++ K +S G
Sbjct: 155 LVDTKQVKIGDFGLVTSLK--NDGKRXRSKG 183
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 78/194 (40%), Gaps = 65/194 (33%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL------TC-AVESVHKMGFIHRDIK 649
++ + +Y+ G L++ L E RF +L C A+E + F+HRD+
Sbjct: 74 IFIITEYMANGCLLNYL------REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 127
Query: 650 PDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECR 709
N L++ G +K++DFGL R+ + +Y S G
Sbjct: 128 ARNCLVNDQGVVKVSDFGLS---RYVLDDEYTSSVGS----------------------- 161
Query: 710 CINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML- 768
P++ + PEVL+ + ++ D W+ GV+++E+
Sbjct: 162 --KFPVR-----------------------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
Query: 769 VGSPPFLANTSAET 782
+G P+ T++ET
Sbjct: 197 LGKMPYERFTNSET 210
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/105 (28%), Positives = 52/105 (49%), Gaps = 13/105 (12%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN--NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
EV +++++ ++ + G+ NL V +Y+ G L LL K G E+ R L
Sbjct: 84 EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDER---RRL 140
Query: 632 TCAVESVHKMGF--------IHRDIKPDNILIDRDGHIKLTDFGL 668
+ A + M + +HRD+K N+L+D+ +K+ DFGL
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRDLKSPNLLVDKKYTVKVCDFGL 185
Score = 33.9 bits (76), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 2/75 (2%)
Query: 735 VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLH 794
GTP ++APEVL + D +S GVIL+E+ P+ N + + ++ C
Sbjct: 200 AGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW-GNLNPAQVVAAVGFK-CKR 257
Query: 795 IPAEAQLSPEGADLI 809
+ L+P+ A +I
Sbjct: 258 LEIPRNLNPQVAAII 272
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 26/164 (15%)
Query: 523 LVRKIDTNHLYVMKTIYKCVGVFGEVTLVR---------KIDTNHLYVMKTIYKCVGAFG 573
+++D ++ + K + G FGEV R + L V T + G
Sbjct: 9 FAKELDATNISIDKVV--GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 66
Query: 574 EVTLVRKIDTNHLYVMKG--SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
E +++ + D ++ ++G + + V +Y+ G L S L K A+F + +L
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQL 120
Query: 632 TCAVESV-------HKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
+ + MG++HRD+ NILI+ + K++DFGL
Sbjct: 121 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 164
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 6/134 (4%)
Query: 542 VGVFGEVTLVRKIDTNHLYV--MKTIYKCVGAF-GEVTLVRKIDTNHLYVMKGS-PHNNL 597
G FGEV + + V MK V AF E +++ + + L + +
Sbjct: 25 AGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPI 84
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARF--YIAELTCAVESVHKMGFIHRDIKPDNILI 655
Y + +++ G L+ L ++PL + + A++ + + + +IHRD++ NIL+
Sbjct: 85 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV 144
Query: 656 DRDGHIKLTDFGLC 669
K+ DFGL
Sbjct: 145 SASLVCKIADFGLA 158
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 6/134 (4%)
Query: 542 VGVFGEVTLVRKIDTNHLYV--MKTIYKCVGAF-GEVTLVRKIDTNHLYVMKGS-PHNNL 597
G FGEV + + V MK V AF E +++ + + L + +
Sbjct: 192 AGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPI 251
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARF--YIAELTCAVESVHKMGFIHRDIKPDNILI 655
Y + +++ G L+ L ++PL + + A++ + + + +IHRD++ NIL+
Sbjct: 252 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV 311
Query: 656 DRDGHIKLTDFGLC 669
K+ DFGL
Sbjct: 312 SASLVCKIADFGLA 325
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 41/92 (44%), Gaps = 18/92 (19%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKM--------------- 641
LY ++Y P G+L+ L K + E A F IA T + S ++
Sbjct: 98 LYLAIEYAPHGNLLDFLRKSRVLETDPA-FAIANSTASTLSSQQLLHFAADVARGMDYLS 156
Query: 642 --GFIHRDIKPDNILIDRDGHIKLTDFGLCTG 671
FIHR++ NIL+ + K+ DFGL G
Sbjct: 157 QKQFIHRNLAARNILVGENYVAKIADFGLSRG 188
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 740 YIAPEVLLRTGYTQLCDWWSVGVILYEML-VGSPPFLANTSAETQYKV 786
++A E L + YT D WS GV+L+E++ +G P+ T AE K+
Sbjct: 204 WMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKL 251
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 26/164 (15%)
Query: 523 LVRKIDTNHLYVMKTIYKCVGVFGEVTLVR---------KIDTNHLYVMKTIYKCVGAFG 573
+++D ++ + K + G FGEV R + L V T + G
Sbjct: 26 FAKELDATNISIDKVV--GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 83
Query: 574 EVTLVRKIDTNHLYVMKG--SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
E +++ + D ++ ++G + + V +Y+ G L S L K A+F + +L
Sbjct: 84 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQL 137
Query: 632 TCAVESV-------HKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
+ + MG++HRD+ NILI+ + K++DFGL
Sbjct: 138 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 181
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVES----VHKMGFIHRDIKPDN 652
+Y V++Y+ G L+ L KG + L + ++ + S V +M ++HRD++ N
Sbjct: 87 IYIVIEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 144
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
IL+ + K+ DFGL R +++Y G
Sbjct: 145 ILVGENLVCKVADFGLA---RLIEDNEYTARQG 174
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/271 (20%), Positives = 102/271 (37%), Gaps = 76/271 (28%)
Query: 523 LVRKIDTNHLYVMKTIYKCVGVFGEVTLVR---------KIDTNHLYVMKTIYKCVGAFG 573
+++D ++ + K + G FGEV R + L V T + G
Sbjct: 38 FAKELDATNISIDKVV--GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 574 EVTLVRKIDTNHLYVMKG--SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
E +++ + D ++ ++G + + V +Y+ G L S L K A+F + +L
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQL 149
Query: 632 TCAVESV-------HKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSN 684
+ + MG++HRD+ NILI+ + K++DFGL
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL---------------- 193
Query: 685 GDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPE 744
GR +P ++ R P++ + +PE
Sbjct: 194 ---GRVLEDDPEAAYT-------TRGGKIPIR-----------------------WTSPE 220
Query: 745 VLLRTGYTQLCDWWSVGVILYE-MLVGSPPF 774
+ +T D WS G++L+E M G P+
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPY 251
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 26/164 (15%)
Query: 523 LVRKIDTNHLYVMKTIYKCVGVFGEVTLVR---------KIDTNHLYVMKTIYKCVGAFG 573
+++D ++ + K + G FGEV R + L V T + G
Sbjct: 38 FAKELDATNISIDKVV--GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 574 EVTLVRKIDTNHLYVMKG--SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
E +++ + D ++ ++G + + V +Y+ G L S L K A+F + +L
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQL 149
Query: 632 TCAVESV-------HKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
+ + MG++HRD+ NILI+ + K++DFGL
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/165 (23%), Positives = 72/165 (43%), Gaps = 26/165 (15%)
Query: 523 LVRKIDTNHLYVMKTIYKCVGVFGEVTLVR---------KIDTNHLYVMKTIYKCVGAFG 573
+++D ++ + K + G FGEV R + L V T + G
Sbjct: 38 FAKELDATNISIDKVV--GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 574 EVTLVRKIDTNHLYVMKG--SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
E +++ + D ++ ++G + + V +Y+ G L S L K A+F + +L
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQL 149
Query: 632 TCAVESV-------HKMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
+ + MG++HRD+ NILI+ + K++DFGL
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLA 194
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 26/164 (15%)
Query: 523 LVRKIDTNHLYVMKTIYKCVGVFGEVTLVR---------KIDTNHLYVMKTIYKCVGAFG 573
+++D ++ + K + G FGEV R + L V T + G
Sbjct: 38 FAKELDATNISIDKVV--GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 574 EVTLVRKIDTNHLYVMKG--SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
E +++ + D ++ ++G + + V +Y+ G L S L K A+F + +L
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQL 149
Query: 632 TCAVESV-------HKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
+ + MG++HRD+ NILI+ + K++DFGL
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 26/164 (15%)
Query: 523 LVRKIDTNHLYVMKTIYKCVGVFGEVTLVR---------KIDTNHLYVMKTIYKCVGAFG 573
+++D ++ + K + G FGEV R + L V T + G
Sbjct: 38 FAKELDATNISIDKVV--GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 574 EVTLVRKIDTNHLYVMKG--SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
E +++ + D ++ ++G + + V +Y+ G L S L K A+F + +L
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQL 149
Query: 632 TCAVESV-------HKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
+ + MG++HRD+ NILI+ + K++DFGL
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 78/194 (40%), Gaps = 65/194 (33%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL------TC-AVESVHKMGFIHRDIK 649
++ + +Y+ G L++ L E RF +L C A+E + F+HRD+
Sbjct: 78 IFIITEYMANGCLLNYL------REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 131
Query: 650 PDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECR 709
N L++ G +K++DFGL R+ + +Y S G
Sbjct: 132 ARNCLVNDQGVVKVSDFGLS---RYVLDDEYTSSVGS----------------------- 165
Query: 710 CINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML- 768
P++ + PEVL+ + ++ D W+ GV+++E+
Sbjct: 166 --KFPVR-----------------------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
Query: 769 VGSPPFLANTSAET 782
+G P+ T++ET
Sbjct: 201 LGKMPYERFTNSET 214
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 26/164 (15%)
Query: 523 LVRKIDTNHLYVMKTIYKCVGVFGEVTLVR---------KIDTNHLYVMKTIYKCVGAFG 573
+++D ++ + K + G FGEV R + L V T + G
Sbjct: 38 FAKELDATNISIDKVV--GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 574 EVTLVRKIDTNHLYVMKG--SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
E +++ + D ++ ++G + + V +Y+ G L S L K A+F + +L
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQL 149
Query: 632 TCAVESV-------HKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
+ + MG++HRD+ NILI+ + K++DFGL
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 78/194 (40%), Gaps = 65/194 (33%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL------TC-AVESVHKMGFIHRDIK 649
++ + +Y+ G L++ L E RF +L C A+E + F+HRD+
Sbjct: 79 IFIITEYMANGCLLNYL------REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 132
Query: 650 PDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECR 709
N L++ G +K++DFGL R+ + +Y S G
Sbjct: 133 ARNCLVNDQGVVKVSDFGLS---RYVLDDEYTSSVGS----------------------- 166
Query: 710 CINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML- 768
P++ + PEVL+ + ++ D W+ GV+++E+
Sbjct: 167 --KFPVR-----------------------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
Query: 769 VGSPPFLANTSAET 782
+G P+ T++ET
Sbjct: 202 LGKMPYERFTNSET 215
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/164 (23%), Positives = 72/164 (43%), Gaps = 26/164 (15%)
Query: 523 LVRKIDTNHLYVMKTIYKCVGVFGEVTLVR---------KIDTNHLYVMKTIYKCVGAFG 573
+++D ++ + K + G FGEV R + L V T + G
Sbjct: 36 FAKELDATNISIDKVV--GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 93
Query: 574 EVTLVRKIDTNHLYVMKG--SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
E +++ + D ++ ++G + + V +Y+ G L S L K A+F + +L
Sbjct: 94 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKHD------AQFTVIQL 147
Query: 632 TCAVESV-------HKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
+ + MG++HRD+ NILI+ + K++DFGL
Sbjct: 148 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 191
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 83/222 (37%), Gaps = 66/222 (29%)
Query: 628 IAELTCAVESVHKMGFIHRDIKPDNILI---DRDGHIK--LTDFGLCTGFRWTHNSKYYQ 682
+ + T + +H + +HRD+KP NILI + G IK ++DFGLC +S +
Sbjct: 124 LQQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRR 183
Query: 683 SNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIA 742
S G PG E +IA
Sbjct: 184 S------------------GVPGTE-------------------------------GWIA 194
Query: 743 PEVL---LRTGYTQLCDWWSVGVILYEMLV-GSPPFLANTSAETQYKVINWE---SCLHI 795
PE+L + T D +S G + Y ++ GS PF S + Q ++ CLH
Sbjct: 195 PEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPF--GKSLQRQANILLGACSLDCLHP 252
Query: 796 PAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPFFSNVD 837
+ A +++ D + +A V HPFF +++
Sbjct: 253 EKHEDVI---ARELIEKMIAMDPQKRPSAKHVLKHPFFWSLE 291
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/134 (23%), Positives = 60/134 (44%), Gaps = 6/134 (4%)
Query: 542 VGVFGEVTLVRKIDTNHLYV--MKTIYKCVGAF-GEVTLVRKIDTNHLYVMKGS-PHNNL 597
G FGEV + + V MK V AF E +++ + + L + +
Sbjct: 198 AGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHAVVTKEPI 257
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARF--YIAELTCAVESVHKMGFIHRDIKPDNILI 655
Y + +++ G L+ L ++PL + + A++ + + + +IHRD++ NIL+
Sbjct: 258 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANILV 317
Query: 656 DRDGHIKLTDFGLC 669
K+ DFGL
Sbjct: 318 SASLVCKIADFGLA 331
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 78/194 (40%), Gaps = 65/194 (33%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL------TC-AVESVHKMGFIHRDIK 649
++ + +Y+ G L++ L E RF +L C A+E + F+HRD+
Sbjct: 85 IFIITEYMANGCLLNYL------REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 138
Query: 650 PDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECR 709
N L++ G +K++DFGL R+ + +Y S G
Sbjct: 139 ARNCLVNDQGVVKVSDFGLS---RYVLDDEYTSSVGS----------------------- 172
Query: 710 CINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML- 768
P++ + PEVL+ + ++ D W+ GV+++E+
Sbjct: 173 --KFPVR-----------------------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
Query: 769 VGSPPFLANTSAET 782
+G P+ T++ET
Sbjct: 208 LGKMPYERFTNSET 221
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVES----VHKMGFIHRDIKPDN 652
+Y V++Y+ G L+ L KG + L + ++ + S V +M ++HRD++ N
Sbjct: 87 IYIVIEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 144
Query: 653 ILIDRDGHIKLTDFGL 668
IL+ + K+ DFGL
Sbjct: 145 ILVGENLVCKVADFGL 160
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/194 (21%), Positives = 78/194 (40%), Gaps = 65/194 (33%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL------TC-AVESVHKMGFIHRDIK 649
++ + +Y+ G L++ L E RF +L C A+E + F+HRD+
Sbjct: 94 IFIITEYMANGCLLNYL------REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 147
Query: 650 PDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECR 709
N L++ G +K++DFGL R+ + +Y S G
Sbjct: 148 ARNCLVNDQGVVKVSDFGLS---RYVLDDEYTSSVGS----------------------- 181
Query: 710 CINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML- 768
P++ + PEVL+ + ++ D W+ GV+++E+
Sbjct: 182 --KFPVR-----------------------WSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
Query: 769 VGSPPFLANTSAET 782
+G P+ T++ET
Sbjct: 217 LGKMPYERFTNSET 230
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 597 LYFVMDYIPGGDLMSLLIKKG----IFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
+Y V +Y+ G L+ L KG P A++ + V +M ++HRD++ N
Sbjct: 253 IYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 310
Query: 653 ILIDRDGHIKLTDFGL 668
IL+ + K+ DFGL
Sbjct: 311 ILVGENLVCKVADFGL 326
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 597 LYFVMDYIPGGDLMSLLIKKG----IFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
+Y V +Y+ G L+ L KG P A++ + V +M ++HRD++ N
Sbjct: 253 IYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 310
Query: 653 ILIDRDGHIKLTDFGL 668
IL+ + K+ DFGL
Sbjct: 311 ILVGENLVCKVADFGL 326
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVES----VHKMGFIHRDIKPDN 652
+Y V +Y+ G L+ L KG + L + ++ + S V +M ++HRD++ N
Sbjct: 78 IYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 135
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
IL+ + K+ DFGL R +++Y G
Sbjct: 136 ILVGENLVCKVADFGLA---RLIEDNEYTARQG 165
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVES----VHKMGFIHRDIKPDN 652
+Y V +Y+ G L+ L KG + L + ++ + S V +M ++HRD++ N
Sbjct: 87 IYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 144
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
IL+ + K+ DFGL R +++Y G
Sbjct: 145 ILVGENLVCKVADFGLA---RLIEDNEYTARQG 174
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/145 (26%), Positives = 57/145 (39%), Gaps = 52/145 (35%)
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGR 689
+L +E + IHRD+ N+L+ + +K+ DFGL R +N YY+ N +GR
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA---RDINNIDYYK-NTTNGR 220
Query: 690 QDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT 749
P+K ++APE L
Sbjct: 221 L-----------------------PVK-----------------------WMAPEALFDR 234
Query: 750 GYTQLCDWWSVGVILYEM--LVGSP 772
YT D WS GV+++E+ L GSP
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 572 FGEVTLVRKIDTNHLYVMKG--SPHNNLYFVMDYIPGGDLMSLLIKK-GIFEEPLARFYI 628
GE +++ + D ++ ++G + + V +Y+ G L + L K G F +
Sbjct: 71 LGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFTVIQLVGML 130
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
++ ++ + MG++HRD+ NILI+ + K++DFGL
Sbjct: 131 RGISAGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 170
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVES----VHKMGFIHRDIKPDN 652
+Y V +Y+ G L+ L KG + L + ++ + S V +M ++HRD++ N
Sbjct: 87 IYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 144
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
IL+ + K+ DFGL R +++Y G
Sbjct: 145 ILVGENLVCKVADFGLA---RLIEDNEYTARQG 174
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 58/287 (20%), Positives = 103/287 (35%), Gaps = 76/287 (26%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGA------FGEVTLVRKIDTNHLYVMKG--SPH 594
G FGEV R N L +K+ + + E ++++ ++ + G +
Sbjct: 125 GNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK 184
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL-------TCAVESVHKMGFIHRD 647
+Y VM+ + GGD ++ L +G AR + L +E + IHRD
Sbjct: 185 QPIYIVMELVQGGDFLTFLRTEG------ARLRVKTLLQMVGDAAAGMEYLESKCCIHRD 238
Query: 648 IKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
+ N L+ +K++DFG+ S E + G
Sbjct: 239 LAARNCLVTEKNVLKISDFGM---------------------------SREEADGVXAAS 271
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 767
P+K + APE L Y+ D WS G++L+E
Sbjct: 272 GGLRQVPVK-----------------------WTAPEALNYGRYSSESDVWSFGILLWET 308
Query: 768 L-VGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC 813
+G+ P+ N S + + + L P +L P+ +++ C
Sbjct: 309 FSLGASPY-PNLSNQQTREFVEKGGRLPCP---ELCPDAVFRLMEQC 351
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFE-EPLARFYIA-ELTCAVESVHKMGFIHRDIKPDNIL 654
Y +++++ G+L+ L + E + Y+A +++ A+E + K FIHRD+ N L
Sbjct: 84 FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 143
Query: 655 IDRDGHIKLTDFGL 668
+ + +K+ DFGL
Sbjct: 144 VGENHLVKVADFGL 157
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVES----VHKMGFIHRDIKPDN 652
+Y V +Y+ G L+ L KG + L + ++ + S V +M ++HRD++ N
Sbjct: 76 IYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 133
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
IL+ + K+ DFGL R +++Y G
Sbjct: 134 ILVGENLVCKVADFGLA---RLIEDNEYTARQG 163
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 59/132 (44%), Gaps = 17/132 (12%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHN--NLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
EV +++++ ++ + G+ NL V +Y+ G L LL K G E+ R L
Sbjct: 84 EVAIMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDER---RRL 140
Query: 632 TCAVESVHKMGF--------IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQS 683
+ A + M + +HR++K N+L+D+ +K+ DFGL S + S
Sbjct: 141 SMAYDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSR----LKASTFLSS 196
Query: 684 NGDHGRQDSMEP 695
G + M P
Sbjct: 197 KSAAGTPEWMAP 208
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 731 AHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWE 790
+ S GTP ++APEVL + D +S GVIL+E+ P+ N + + ++
Sbjct: 196 SKSAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQPW-GNLNPAQVVAAVGFK 254
Query: 791 SCLHIPAEAQLSPEGADLI 809
C + L+P+ A +I
Sbjct: 255 -CKRLEIPRNLNPQVAAII 272
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 44/93 (47%), Gaps = 9/93 (9%)
Query: 597 LYFVMDYIPGGDLMSLLIKKG----IFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
+Y V +Y+ G L+ L KG P A++ + V +M ++HRD++ N
Sbjct: 80 IYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 137
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
IL+ + K+ DFGL R +++Y G
Sbjct: 138 ILVGENLVCKVADFGLA---RLIEDNEYTARQG 167
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 40/76 (52%), Gaps = 6/76 (7%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVES----VHKMGFIHRDIKPDN 652
+Y V +Y+ G L+ L KG + L + ++ + S V +M ++HRD++ N
Sbjct: 254 IYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 311
Query: 653 ILIDRDGHIKLTDFGL 668
IL+ + K+ DFGL
Sbjct: 312 ILVGENLVCKVADFGL 327
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 6/77 (7%)
Query: 597 LYFVMDYIPGGDLMSLLIKKG----IFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
+Y V +Y+ G L+ L KG P A++ + V +M ++HRD++ N
Sbjct: 336 IYIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 393
Query: 653 ILIDRDGHIKLTDFGLC 669
IL+ + K+ DFGL
Sbjct: 394 ILVGENLVCKVADFGLA 410
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 40.8 bits (94), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFE-EPLARFYIA-ELTCAVESVHKMGFIHRDIKPDNIL 654
Y +++++ G+L+ L + E + Y+A +++ A+E + K FIHRD+ N L
Sbjct: 89 FYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 148
Query: 655 IDRDGHIKLTDFGL 668
+ + +K+ DFGL
Sbjct: 149 VGENHLVKVADFGL 162
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFE-EPLARFYIA-ELTCAVESVHKMGFIHRDIKPDNIL 654
Y +++++ G+L+ L + E + Y+A +++ A+E + K FIHRD+ N L
Sbjct: 84 FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 143
Query: 655 IDRDGHIKLTDFGL 668
+ + +K+ DFGL
Sbjct: 144 VGENHLVKVADFGL 157
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/265 (19%), Positives = 104/265 (39%), Gaps = 62/265 (23%)
Query: 523 LVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAF---------G 573
++ID +++ + + I G FGEV R I G +
Sbjct: 9 FAKEIDVSYVKIEEVI--GAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLS 66
Query: 574 EVTLVRKIDTNHLYVMKGSPHNNL--YFVMDYIPGGDLMSLL-IKKGIFEEPLARFYIAE 630
E +++ + + ++ ++G N++ + +++ G L S L + G F +
Sbjct: 67 EASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRG 126
Query: 631 LTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQ 690
+ + + +M ++HRD+ NIL++ + K++DFGL S++ + N
Sbjct: 127 IASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGL---------SRFLEEN------ 171
Query: 691 DSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG 750
S +P+E S G P++ + APE +
Sbjct: 172 -SSDPTETSSLGG--------KIPIR-----------------------WTAPEAIAFRK 199
Query: 751 YTQLCDWWSVGVILYE-MLVGSPPF 774
+T D WS G++++E M G P+
Sbjct: 200 FTSASDAWSYGIVMWEVMSFGERPY 224
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFE-EPLARFYIA-ELTCAVESVHKMGFIHRDIKPDNIL 654
Y +++++ G+L+ L + E + Y+A +++ A+E + K FIHRD+ N L
Sbjct: 85 FYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 144
Query: 655 IDRDGHIKLTDFGL 668
+ + +K+ DFGL
Sbjct: 145 VGENHLVKVADFGL 158
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 52/248 (20%), Positives = 95/248 (38%), Gaps = 59/248 (23%)
Query: 542 VGVFGEVTLVRKIDTNHLYV--MKTIYKCVGAF-GEVTLVRKIDTNHLYVMKG--SPHNN 596
G FGEV + ++ + V +K V AF E L++ + + L + +
Sbjct: 23 AGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTREEP 82
Query: 597 LYFVMDYIPGGDLMSLLI--KKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
+Y + +Y+ G L+ L + G P + A++ + + + +IHRD++ N+L
Sbjct: 83 IYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVL 142
Query: 655 IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSP 714
+ K+ DFGL R +++Y G P
Sbjct: 143 VSESLMCKIADFGLA---RVIEDNEYTAREG-------------------------AKFP 174
Query: 715 LKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLV-GSPP 773
+K + APE + +T D WS G++LYE++ G P
Sbjct: 175 IK-----------------------WTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIP 211
Query: 774 FLANTSAE 781
+ T+A+
Sbjct: 212 YPGRTNAD 219
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFE-EPLARFYIA-ELTCAVESVHKMGFIHRDIKPDNIL 654
Y +++++ G+L+ L + E + Y+A +++ A+E + K FIHRD+ N L
Sbjct: 82 FYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 141
Query: 655 IDRDGHIKLTDFGL 668
+ + +K+ DFGL
Sbjct: 142 VGENHLVKVADFGL 155
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILID---RDGHIKLTDFGLCTGFR--WTHNSKYYQSN 684
++ +E +H FIHRD+KPDN L+ + + + DFGL +R TH Y+ N
Sbjct: 113 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 172
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 73/206 (35%), Gaps = 64/206 (31%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSN 684
++++ + + +H+ G +HRD+ P NIL+ + I + DF L N +Y ++
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH 196
Query: 685 GDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPE 744
W Y APE
Sbjct: 197 -------------RW----------------------------------------YRAPE 203
Query: 745 VLLR-TGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSP 803
++++ G+T+L D WS G ++ EM F +T K++ E +P
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV----------EVVGTP 253
Query: 804 EGADLILQLCTGADKRLGKNASEVKA 829
+ D+++ A L + S V A
Sbjct: 254 KIEDVVMFSSPSARDYLRNSLSNVPA 279
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILID---RDGHIKLTDFGLCTGFR--WTHNSKYYQSN 684
++ +E +H FIHRD+KPDN L+ + + + DFGL +R TH Y+ N
Sbjct: 113 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 172
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVES----VHKMGFIHRDIKPDN 652
+Y V +Y+ G L+ L KG + L + ++ + S V +M ++HRD++ N
Sbjct: 87 IYIVCEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 144
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
IL+ + K+ DFGL R +++Y G
Sbjct: 145 ILVGENLVCKVADFGLA---RLIEDNEYTARQG 174
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 77/196 (39%), Gaps = 61/196 (31%)
Query: 598 YFVMDYIPGGDLMSLLIK-KGIFEEP-----LARFYIA-ELTCAVESVHKMGFIHRDIKP 650
+ +M+ + GGDL S L + + +P L ++A ++ C + + + FIHRDI
Sbjct: 109 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 168
Query: 651 DNILIDRDGH---IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
N L+ G K+ DFG+ R + + YY+ G
Sbjct: 169 RNCLLTCPGPGRVAKIGDFGMA---RDIYRASYYRKGG---------------------- 203
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 767
C P+K ++ PE + +T D WS GV+L+E+
Sbjct: 204 --CAMLPVK-----------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
Query: 768 L-VGSPPFLANTSAET 782
+G P+ + ++ E
Sbjct: 239 FSLGYMPYPSKSNQEV 254
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/206 (19%), Positives = 73/206 (35%), Gaps = 64/206 (31%)
Query: 625 RFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSN 684
++++ + + +H+ G +HRD+ P NIL+ + I + DF L N +Y ++
Sbjct: 137 QYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTH 196
Query: 685 GDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPE 744
W Y APE
Sbjct: 197 -------------RW----------------------------------------YRAPE 203
Query: 745 VLLR-TGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQLSP 803
++++ G+T+L D WS G ++ EM F +T K++ E +P
Sbjct: 204 LVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIV----------EVVGTP 253
Query: 804 EGADLILQLCTGADKRLGKNASEVKA 829
+ D+++ A L + S V A
Sbjct: 254 KIEDVVMFSSPSARDYLRNSLSNVPA 279
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILID---RDGHIKLTDFGLCTGFR--WTHNSKYYQSN 684
++ +E +H FIHRD+KPDN L+ + + + DFGL +R TH Y+ N
Sbjct: 111 QMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYREN 170
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 40.4 bits (93), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/196 (22%), Positives = 77/196 (39%), Gaps = 61/196 (31%)
Query: 598 YFVMDYIPGGDLMSLLIK-KGIFEEP-----LARFYIA-ELTCAVESVHKMGFIHRDIKP 650
+ +M+ + GGDL S L + + +P L ++A ++ C + + + FIHRDI
Sbjct: 124 FILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 183
Query: 651 DNILIDRDGH---IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
N L+ G K+ DFG+ R + + YY+ G
Sbjct: 184 RNCLLTCPGPGRVAKIGDFGMA---RDIYRASYYRKGG---------------------- 218
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 767
C P+K ++ PE + +T D WS GV+L+E+
Sbjct: 219 --CAMLPVK-----------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
Query: 768 L-VGSPPFLANTSAET 782
+G P+ + ++ E
Sbjct: 254 FSLGYMPYPSKSNQEV 269
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 6/76 (7%)
Query: 597 LYFVMDYIPGGDLMSLLIKKG----IFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
+Y V +Y+ G L+ L KG P A++ + V +M ++HRD++ N
Sbjct: 253 IYIVGEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 310
Query: 653 ILIDRDGHIKLTDFGL 668
IL+ + K+ DFGL
Sbjct: 311 ILVGENLVCKVADFGL 326
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 40.4 bits (93), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 9/93 (9%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVES----VHKMGFIHRDIKPDN 652
+Y V +Y+ G L+ L KG + L + +++ + S V +M ++HRD++ N
Sbjct: 84 IYIVTEYMNKGSLLDFL--KGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAAN 141
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
IL+ + K+ DFGL R +++Y G
Sbjct: 142 ILVGENLVCKVADFGLA---RLIEDNEYTARQG 171
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFE-EPLARFYIA-ELTCAVESVHKMGFIHRDIKPDNIL 654
Y + +++ G+L+ L + E + Y+A +++ A+E + K FIHRD+ N L
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 143
Query: 655 IDRDGHIKLTDFGL 668
+ + +K+ DFGL
Sbjct: 144 VGENHLVKVADFGL 157
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFE-EPLARFYIA-ELTCAVESVHKMGFIHRDIKPDNIL 654
Y + +++ G+L+ L + E + Y+A +++ A+E + K FIHRD+ N L
Sbjct: 85 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 144
Query: 655 IDRDGHIKLTDFGL 668
+ + +K+ DFGL
Sbjct: 145 VGENHLVKVADFGL 158
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 78/227 (34%), Gaps = 73/227 (32%)
Query: 628 IAELTCAVESVHKMGFIHRDIKPDNILIDRDG-------------HIKLTDFGLCTGFRW 674
+ ++ V +H + IHRD+KP NIL+ I ++DFGLC
Sbjct: 139 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC----- 193
Query: 675 THNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSL 734
K S R + PS
Sbjct: 194 ----KKLDSGQXXFRXNLNNPS-------------------------------------- 211
Query: 735 VGTPNYIAPEVL---LRTGYTQLCDWWSVGVILYEMLV-GSPPFLANTSAETQYK----V 786
GT + APE+L + T+ D +S+G + Y +L G PF S E+
Sbjct: 212 -GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFS 270
Query: 787 INWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPFF 833
++ CLH + L E DLI Q+ D A +V HP F
Sbjct: 271 LDEMKCLH---DRSLIAEATDLISQMID-HDPLKRPTAMKVLRHPLF 313
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 40.0 bits (92), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 59/287 (20%), Positives = 104/287 (36%), Gaps = 76/287 (26%)
Query: 543 GVFGEVTLVRKIDTNHLYVMKTIYKCVGA------FGEVTLVRKIDTNHLYVMKG--SPH 594
G FGEV R N L +K+ + + E ++++ ++ + G +
Sbjct: 125 GNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVCTQK 184
Query: 595 NNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL-------TCAVESVHKMGFIHRD 647
+Y VM+ + GGD ++ L +G AR + L +E + IHRD
Sbjct: 185 QPIYIVMELVQGGDFLTFLRTEG------ARLRVKTLLQMVGDAAAGMEYLESKCCIHRD 238
Query: 648 IKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
+ N L+ +K++DFG+ R + Y S G
Sbjct: 239 LAARNCLVTEKNVLKISDFGMS---REEADGVYAASGGLR-------------------- 275
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 767
P+K + APE L Y+ D WS G++L+E
Sbjct: 276 ----QVPVK-----------------------WTAPEALNYGRYSSESDVWSFGILLWET 308
Query: 768 L-VGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC 813
+G+ P+ N S + + + L P +L P+ +++ C
Sbjct: 309 FSLGASPY-PNLSNQQTREFVEKGGRLPCP---ELCPDAVFRLMEQC 351
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 52/270 (19%), Positives = 106/270 (39%), Gaps = 62/270 (22%)
Query: 518 FGEVTLVRKIDTNHLYVMKTIYKCVGVFGEVTLVRKIDTNHLYVMKTIYKCVGAF----- 572
+G + ++ID +++ + + I G FGEV R I G +
Sbjct: 2 WGSMEFAKEIDVSYVKIEEVI--GAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQR 59
Query: 573 ----GEVTLVRKIDTNHLYVMKGSPHNNL--YFVMDYIPGGDLMSLL-IKKGIFEEPLAR 625
E +++ + + ++ ++G N++ + +++ G L S L + G F
Sbjct: 60 REFLSEASIMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLV 119
Query: 626 FYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
+ + + + +M ++HRD+ NIL++ + K++DFGL S++ + N
Sbjct: 120 GMLRGIASGMRYLAEMSYVHRDLAARNILVNSNLVCKVSDFGL---------SRFLEEN- 169
Query: 686 DHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEV 745
S +P+ S G P++ + APE
Sbjct: 170 ------SSDPTYTSSLGG--------KIPIR-----------------------WTAPEA 192
Query: 746 LLRTGYTQLCDWWSVGVILYE-MLVGSPPF 774
+ +T D WS G++++E M G P+
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMSFGERPY 222
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFE-EPLARFYIA-ELTCAVESVHKMGFIHRDIKPDNIL 654
Y + +++ G+L+ L + E + Y+A +++ A+E + K FIHRD+ N L
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 143
Query: 655 IDRDGHIKLTDFGL 668
+ + +K+ DFGL
Sbjct: 144 VGENHLVKVADFGL 157
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFE-EPLARFYIA-ELTCAVESVHKMGFIHRDIKPDNIL 654
Y + +++ G+L+ L + E + Y+A +++ A+E + K FIHRD+ N L
Sbjct: 89 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 148
Query: 655 IDRDGHIKLTDFGL 668
+ + +K+ DFGL
Sbjct: 149 VGENHLVKVADFGL 162
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFE-EPLARFYIA-ELTCAVESVHKMGFIHRDIKPDNIL 654
Y + +++ G+L+ L + E + Y+A +++ A+E + K FIHRD+ N L
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 143
Query: 655 IDRDGHIKLTDFGL 668
+ + +K+ DFGL
Sbjct: 144 VGENHLVKVADFGL 157
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFE-EPLARFYIA-ELTCAVESVHKMGFIHRDIKPDNIL 654
Y + +++ G+L+ L + E + Y+A +++ A+E + K FIHRD+ N L
Sbjct: 97 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 156
Query: 655 IDRDGHIKLTDFGL 668
+ + +K+ DFGL
Sbjct: 157 VGENHLVKVADFGL 170
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 54/227 (23%), Positives = 78/227 (34%), Gaps = 73/227 (32%)
Query: 628 IAELTCAVESVHKMGFIHRDIKPDNILIDRDG-------------HIKLTDFGLCTGFRW 674
+ ++ V +H + IHRD+KP NIL+ I ++DFGLC
Sbjct: 139 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC----- 193
Query: 675 THNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSL 734
K S R + PS
Sbjct: 194 ----KKLDSGQXXFRXNLNNPS-------------------------------------- 211
Query: 735 VGTPNYIAPEVL---LRTGYTQLCDWWSVGVILYEMLV-GSPPFLANTSAETQYK----V 786
GT + APE+L + T+ D +S+G + Y +L G PF S E+
Sbjct: 212 -GTSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIRGIFS 270
Query: 787 INWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPFF 833
++ CLH + L E DLI Q+ D A +V HP F
Sbjct: 271 LDEMKCLH---DRSLIAEATDLISQMID-HDPLKRPTAMKVLRHPLF 313
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFE-EPLARFYIA-ELTCAVESVHKMGFIHRDIKPDNIL 654
Y + +++ G+L+ L + E + Y+A +++ A+E + K FIHRD+ N L
Sbjct: 84 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 143
Query: 655 IDRDGHIKLTDFGL 668
+ + +K+ DFGL
Sbjct: 144 VGENHLVKVADFGL 157
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFE-EPLARFYIA-ELTCAVESVHKMGFIHRDIKPDNIL 654
Y + +++ G+L+ L + E + Y+A +++ A+E + K FIHRD+ N L
Sbjct: 86 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 145
Query: 655 IDRDGHIKLTDFGL 668
+ + +K+ DFGL
Sbjct: 146 VGENHLVKVADFGL 159
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFE-EPLARFYIA-ELTCAVESVHKMGFIHRDIKPDNIL 654
Y + +++ G+L+ L + E + Y+A +++ A+E + K FIHRD+ N L
Sbjct: 82 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 141
Query: 655 IDRDGHIKLTDFGL 668
+ + +K+ DFGL
Sbjct: 142 VGENHLVKVADFGL 155
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFE-EPLARFYIA-ELTCAVESVHKMGFIHRDIKPDNIL 654
Y + +++ G+L+ L + E + Y+A +++ A+E + K FIHRD+ N L
Sbjct: 89 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 148
Query: 655 IDRDGHIKLTDFGL 668
+ + +K+ DFGL
Sbjct: 149 VGENHLVKVADFGL 162
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 77/195 (39%), Gaps = 61/195 (31%)
Query: 598 YFVMDYIPGGDLMSLLIK-KGIFEEP-----LARFYIA-ELTCAVESVHKMGFIHRDIKP 650
+ +++ + GGDL S L + + +P L ++A ++ C + + + FIHRDI
Sbjct: 136 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 195
Query: 651 DNILIDRDGH---IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
N L+ G K+ DFG+ R + + YY+ G
Sbjct: 196 RNCLLTCPGPGRVAKIGDFGMA---RDIYRASYYRKGG---------------------- 230
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 767
C P+K ++ PE + +T D WS GV+L+E+
Sbjct: 231 --CAMLPVK-----------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEI 265
Query: 768 L-VGSPPFLANTSAE 781
+G P+ + ++ E
Sbjct: 266 FSLGYMPYPSKSNQE 280
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFE-EPLARFYIA-ELTCAVESVHKMGFIHRDIKPDNIL 654
Y + +++ G+L+ L + E + Y+A +++ A+E + K FIHRD+ N L
Sbjct: 89 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 148
Query: 655 IDRDGHIKLTDFGL 668
+ + +K+ DFGL
Sbjct: 149 VGENHLVKVADFGL 162
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFE-EPLARFYIA-ELTCAVESVHKMGFIHRDIKPDNIL 654
Y + +++ G+L+ L + E + Y+A +++ A+E + K FIHRD+ N L
Sbjct: 89 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 148
Query: 655 IDRDGHIKLTDFGL 668
+ + +K+ DFGL
Sbjct: 149 VGENHLVKVADFGL 162
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFE-EPLARFYIA-ELTCAVESVHKMGFIHRDIKPDNIL 654
Y + +++ G+L+ L + E + Y+A +++ A+E + K FIHRD+ N L
Sbjct: 86 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 145
Query: 655 IDRDGHIKLTDFGL 668
+ + +K+ DFGL
Sbjct: 146 VGENHLVKVADFGL 159
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFE-EPLARFYIA-ELTCAVESVHKMGFIHRDIKPDNIL 654
Y + +++ G+L+ L + E + Y+A +++ A+E + K FIHRD+ N L
Sbjct: 86 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 145
Query: 655 IDRDGHIKLTDFGL 668
+ + +K+ DFGL
Sbjct: 146 VGENHLVKVADFGL 159
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFE-EPLARFYIA-ELTCAVESVHKMGFIHRDIKPDNIL 654
Y + +++ G+L+ L + E + Y+A +++ A+E + K FIHRD+ N L
Sbjct: 82 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 141
Query: 655 IDRDGHIKLTDFGL 668
+ + +K+ DFGL
Sbjct: 142 VGENHLVKVADFGL 155
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 41/76 (53%), Gaps = 6/76 (7%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVES----VHKMGFIHRDIKPDN 652
+Y V +Y+ G L+ L KG + L + +++ + S V +M ++HRD++ N
Sbjct: 84 IYIVTEYMNKGSLLDFL--KGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDLRAAN 141
Query: 653 ILIDRDGHIKLTDFGL 668
IL+ + K+ DFGL
Sbjct: 142 ILVGENLVCKVADFGL 157
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 40.0 bits (92), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFE-EPLARFYIA-ELTCAVESVHKMGFIHRDIKPDNIL 654
Y + +++ G+L+ L + E + Y+A +++ A+E + K FIHRD+ N L
Sbjct: 88 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCL 147
Query: 655 IDRDGHIKLTDFGL 668
+ + +K+ DFGL
Sbjct: 148 VGENHLVKVADFGL 161
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 45/93 (48%), Gaps = 9/93 (9%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVES----VHKMGFIHRDIKPDN 652
+Y V +Y+ G L+ L KG + L + ++ + S V +M ++HRD+ N
Sbjct: 87 IYIVTEYMSKGSLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLAAAN 144
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
IL+ + K+ DFGL R +++Y G
Sbjct: 145 ILVGENLVCKVADFGLA---RLIEDNEYTARQG 174
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/231 (22%), Positives = 82/231 (35%), Gaps = 77/231 (33%)
Query: 628 IAELTCAVESVHKMGFIHRDIKPDNILIDRDG-------------HIKLTDFGLCTGFRW 674
+ ++ V +H + IHRD+KP NIL+ I ++DFGLC
Sbjct: 121 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDS 180
Query: 675 THNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSL 734
+S +++N +N+P
Sbjct: 181 GQSS--FRTN--------------------------LNNP-------------------- 192
Query: 735 VGTPNYIAPEVLLRTG-------YTQLCDWWSVGVILYEMLV-GSPPFLANTSAETQYK- 785
GT + APE+L + T+ D +S+G + Y +L G PF S E+
Sbjct: 193 SGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIR 252
Query: 786 ---VINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPFF 833
++ CLH + L E DLI Q+ D A +V HP F
Sbjct: 253 GIFSLDEMKCLH---DRSLIAEATDLISQMI-DHDPLKRPTAMKVLRHPLF 299
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 39.7 bits (91), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 76/194 (39%), Gaps = 65/194 (33%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL------TC-AVESVHKMGFIHRDIK 649
++ + +Y+ G L++ L E RF +L C A+E + F+HRD+
Sbjct: 94 IFIITEYMANGCLLNYL------REMRHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLA 147
Query: 650 PDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECR 709
N L++ G +K++DFGL S+Y + + S P WS
Sbjct: 148 ARNCLVNDQGVVKVSDFGL---------SRYVLDDEETSSVGSKFPV-RWS--------- 188
Query: 710 CINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEML- 768
PEVL+ + ++ D W+ GV+++E+
Sbjct: 189 --------------------------------PPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
Query: 769 VGSPPFLANTSAET 782
+G P+ T++ET
Sbjct: 217 LGKMPYERFTNSET 230
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 47/221 (21%), Positives = 88/221 (39%), Gaps = 63/221 (28%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHNNL--YFVMDYIPGGDLMSLLIK-KGIFEEP-----LAR 625
E ++ K++ ++ G +L + +++ + GGDL S L + + +P L
Sbjct: 84 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 143
Query: 626 FYIA-ELTCAVESVHKMGFIHRDIKPDNILIDRDGH---IKLTDFGLCTGFRWTHNSKYY 681
++A ++ C + + + FIHRDI N L+ G K+ DFG+ R + + YY
Sbjct: 144 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA---RDIYRASYY 200
Query: 682 QSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYI 741
+ G C P+K ++
Sbjct: 201 RKGG------------------------CAMLPVK-----------------------WM 213
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEML-VGSPPFLANTSAE 781
PE + +T D WS GV+L+E+ +G P+ + ++ E
Sbjct: 214 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQE 254
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 46/93 (49%), Gaps = 9/93 (9%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVES----VHKMGFIHRDIKPDN 652
+Y V +Y+ G L+ L KG + L + ++ + S V +M ++HRD++ N
Sbjct: 87 IYIVTEYMSKGCLLDFL--KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 144
Query: 653 ILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
IL+ + K+ DFGL R +++Y G
Sbjct: 145 ILVGENLVCKVADFGLA---RLIEDNEYTARQG 174
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 39.7 bits (91), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 740 YIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI 787
Y +PEVLL Y D WS+G IL EM G P F + K++
Sbjct: 205 YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 252
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 740 YIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI 787
Y +PEVLL Y D WS+G IL EM G P F + K++
Sbjct: 224 YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 39.7 bits (91), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 24/48 (50%)
Query: 740 YIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVI 787
Y +PEVLL Y D WS+G IL EM G P F + K++
Sbjct: 224 YRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIV 271
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 77/195 (39%), Gaps = 61/195 (31%)
Query: 598 YFVMDYIPGGDLMSLLIK-KGIFEEP-----LARFYIA-ELTCAVESVHKMGFIHRDIKP 650
+ +++ + GGDL S L + + +P L ++A ++ C + + + FIHRDI
Sbjct: 110 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 169
Query: 651 DNILIDRDGH---IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
N L+ G K+ DFG+ R + + YY+ G
Sbjct: 170 RNCLLTCPGPGRVAKIGDFGMA---RDIYRASYYRKGG---------------------- 204
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 767
C P+K ++ PE + +T D WS GV+L+E+
Sbjct: 205 --CAMLPVK-----------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
Query: 768 L-VGSPPFLANTSAE 781
+G P+ + ++ E
Sbjct: 240 FSLGYMPYPSKSNQE 254
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 608 DLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH-----IK 662
DL+ L +K F ++ V+S+H+ ++RDIKPDN LI R I
Sbjct: 93 DLLDLCGRK--FSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIY 150
Query: 663 LTDFGLCTGFR 673
+ DFG+ +R
Sbjct: 151 VVDFGMVKFYR 161
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 77/195 (39%), Gaps = 61/195 (31%)
Query: 598 YFVMDYIPGGDLMSLLIK-KGIFEEP-----LARFYIA-ELTCAVESVHKMGFIHRDIKP 650
+ +++ + GGDL S L + + +P L ++A ++ C + + + FIHRDI
Sbjct: 126 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 185
Query: 651 DNILIDRDGH---IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
N L+ G K+ DFG+ R + + YY+ G
Sbjct: 186 RNCLLTCPGPGRVAKIGDFGMA---RDIYRASYYRKGG---------------------- 220
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 767
C P+K ++ PE + +T D WS GV+L+E+
Sbjct: 221 --CAMLPVK-----------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEI 255
Query: 768 L-VGSPPFLANTSAE 781
+G P+ + ++ E
Sbjct: 256 FSLGYMPYPSKSNQE 270
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 574 EVTLVRKIDTNHLYVMKG----SPHNNLYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYI 628
E+ ++R + ++ KG N + +M+++P G L L K K Y
Sbjct: 73 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYA 132
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
++ ++ + ++HRD+ N+L++ + +K+ DFGL
Sbjct: 133 VQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGL 172
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 35/71 (49%), Gaps = 7/71 (9%)
Query: 608 DLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGH-----IK 662
DL+ L +K F ++ V+S+H+ ++RDIKPDN LI R I
Sbjct: 94 DLLDLCGRK--FSVKTVAMAAKQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIY 151
Query: 663 LTDFGLCTGFR 673
+ DFG+ +R
Sbjct: 152 VVDFGMVKFYR 162
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 48/100 (48%), Gaps = 5/100 (5%)
Query: 574 EVTLVRKIDTNHLYVMKG----SPHNNLYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYI 628
E+ ++R + ++ KG N + +M+++P G L L K K Y
Sbjct: 61 EIEILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYA 120
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
++ ++ + ++HRD+ N+L++ + +K+ DFGL
Sbjct: 121 VQICKGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGL 160
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 39.3 bits (90), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 77/195 (39%), Gaps = 61/195 (31%)
Query: 598 YFVMDYIPGGDLMSLLIK-KGIFEEP-----LARFYIA-ELTCAVESVHKMGFIHRDIKP 650
+ +++ + GGDL S L + + +P L ++A ++ C + + + FIHRDI
Sbjct: 116 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 175
Query: 651 DNILIDRDGH---IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
N L+ G K+ DFG+ R + + YY+ G
Sbjct: 176 RNCLLTCPGPGRVAKIGDFGMA---RDIYRASYYRKGG---------------------- 210
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 767
C P+K ++ PE + +T D WS GV+L+E+
Sbjct: 211 --CAMLPVK-----------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEI 245
Query: 768 L-VGSPPFLANTSAE 781
+G P+ + ++ E
Sbjct: 246 FSLGYMPYPSKSNQE 260
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Query: 597 LYFVMDYIPGGDLMSLLIKKG---IFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNI 653
+Y V +Y+ G L+ L K G + P A++ + + +M +IHRD++ NI
Sbjct: 78 IYIVTEYMNKGSLLDFL-KDGEGRALKLPNLVDMAAQVAAGMAYIERMNYIHRDLRSANI 136
Query: 654 LIDRDGHIKLTDFGLC 669
L+ K+ DFGL
Sbjct: 137 LVGNGLICKIADFGLA 152
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/222 (21%), Positives = 88/222 (39%), Gaps = 63/222 (28%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHNNL--YFVMDYIPGGDLMSLLIK-KGIFEEP-----LAR 625
E ++ K++ ++ G +L + +++ + GGDL S L + + +P L
Sbjct: 98 EALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL 157
Query: 626 FYIA-ELTCAVESVHKMGFIHRDIKPDNILIDRDGH---IKLTDFGLCTGFRWTHNSKYY 681
++A ++ C + + + FIHRDI N L+ G K+ DFG+ R + + YY
Sbjct: 158 LHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA---RDIYRASYY 214
Query: 682 QSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYI 741
+ G C P+K ++
Sbjct: 215 RKGG------------------------CAMLPVK-----------------------WM 227
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEML-VGSPPFLANTSAET 782
PE + +T D WS GV+L+E+ +G P+ + ++ E
Sbjct: 228 PPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEV 269
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGH-----IKLTDFGLC 669
+L +E VH I+RD+KP+N LI R G+ I + DFGL
Sbjct: 105 QLLSRMEYVHSKNLIYRDVKPENFLIGRQGNKKEHVIHIIDFGLA 149
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 77/196 (39%), Gaps = 61/196 (31%)
Query: 598 YFVMDYIPGGDLMSLLIK-KGIFEEP-----LARFYIA-ELTCAVESVHKMGFIHRDIKP 650
+ +++ + GGDL S L + + +P L ++A ++ C + + + FIHRDI
Sbjct: 109 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 168
Query: 651 DNILIDRDGH---IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
N L+ G K+ DFG+ R + + YY+ G
Sbjct: 169 RNCLLTCPGPGRVAKIGDFGMA---RDIYRASYYRKGG---------------------- 203
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 767
C P+K ++ PE + +T D WS GV+L+E+
Sbjct: 204 --CAMLPVK-----------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEI 238
Query: 768 L-VGSPPFLANTSAET 782
+G P+ + ++ E
Sbjct: 239 FSLGYMPYPSKSNQEV 254
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 39.3 bits (90), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 52/145 (35%)
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGR 689
+L +E + IHRD+ N+L+ + +K+ DFGL R +N YY+ +GR
Sbjct: 211 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA---RDINNIDYYKKT-TNGR 266
Query: 690 QDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT 749
P+K ++APE L
Sbjct: 267 L-----------------------PVK-----------------------WMAPEALFDR 280
Query: 750 GYTQLCDWWSVGVILYEM--LVGSP 772
YT D WS GV+++E+ L GSP
Sbjct: 281 VYTHQSDVWSFGVLMWEIFTLGGSP 305
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 77/195 (39%), Gaps = 61/195 (31%)
Query: 598 YFVMDYIPGGDLMSLLIK-KGIFEEP-----LARFYIA-ELTCAVESVHKMGFIHRDIKP 650
+ +++ + GGDL S L + + +P L ++A ++ C + + + FIHRDI
Sbjct: 150 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 209
Query: 651 DNILIDRDGH---IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
N L+ G K+ DFG+ R + + YY+ G
Sbjct: 210 RNCLLTCPGPGRVAKIGDFGMA---RDIYRAGYYRKGG---------------------- 244
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 767
C P+K ++ PE + +T D WS GV+L+E+
Sbjct: 245 --CAMLPVK-----------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEI 279
Query: 768 L-VGSPPFLANTSAE 781
+G P+ + ++ E
Sbjct: 280 FSLGYMPYPSKSNQE 294
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 52/145 (35%)
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGR 689
+L +E + IHRD+ N+L+ + +K+ DFGL R +N YY+ +GR
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA---RDINNIDYYKKT-TNGR 220
Query: 690 QDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT 749
P+K ++APE L
Sbjct: 221 L-----------------------PVK-----------------------WMAPEALFDR 234
Query: 750 GYTQLCDWWSVGVILYEM--LVGSP 772
YT D WS GV+++E+ L GSP
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 77/196 (39%), Gaps = 61/196 (31%)
Query: 598 YFVMDYIPGGDLMSLLIK-KGIFEEP-----LARFYIA-ELTCAVESVHKMGFIHRDIKP 650
+ +++ + GGDL S L + + +P L ++A ++ C + + + FIHRDI
Sbjct: 124 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 183
Query: 651 DNILIDRDGH---IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
N L+ G K+ DFG+ R + + YY+ G
Sbjct: 184 RNCLLTCPGPGRVAKIGDFGMA---RDIYRASYYRKGG---------------------- 218
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 767
C P+K ++ PE + +T D WS GV+L+E+
Sbjct: 219 --CAMLPVK-----------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEI 253
Query: 768 L-VGSPPFLANTSAET 782
+G P+ + ++ E
Sbjct: 254 FSLGYMPYPSKSNQEV 269
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 52/145 (35%)
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGR 689
+L +E + IHRD+ N+L+ + +K+ DFGL R +N YY+ +GR
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA---RDINNIDYYKKT-TNGR 220
Query: 690 QDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT 749
P+K ++APE L
Sbjct: 221 L-----------------------PVK-----------------------WMAPEALFDR 234
Query: 750 GYTQLCDWWSVGVILYEM--LVGSP 772
YT D WS GV+++E+ L GSP
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 52/145 (35%)
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGR 689
+L +E + IHRD+ N+L+ + +K+ DFGL R +N YY+ +GR
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA---RDINNIDYYKKT-TNGR 220
Query: 690 QDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT 749
P+K ++APE L
Sbjct: 221 L-----------------------PVK-----------------------WMAPEALFDR 234
Query: 750 GYTQLCDWWSVGVILYEM--LVGSP 772
YT D WS GV+++E+ L GSP
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 39.3 bits (90), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/195 (22%), Positives = 77/195 (39%), Gaps = 61/195 (31%)
Query: 598 YFVMDYIPGGDLMSLLIK-KGIFEEP-----LARFYIA-ELTCAVESVHKMGFIHRDIKP 650
+ +++ + GGDL S L + + +P L ++A ++ C + + + FIHRDI
Sbjct: 127 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 186
Query: 651 DNILIDRDGH---IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
N L+ G K+ DFG+ R + + YY+ G
Sbjct: 187 RNCLLTCPGPGRVAKIGDFGMA---RDIYRAGYYRKGG---------------------- 221
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 767
C P+K ++ PE + +T D WS GV+L+E+
Sbjct: 222 --CAMLPVK-----------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEI 256
Query: 768 L-VGSPPFLANTSAE 781
+G P+ + ++ E
Sbjct: 257 FSLGYMPYPSKSNQE 271
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 52/145 (35%)
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGR 689
+L +E + IHRD+ N+L+ + +K+ DFGL R +N YY+ +GR
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA---RDINNIDYYKKT-TNGR 220
Query: 690 QDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT 749
P+K ++APE L
Sbjct: 221 L-----------------------PVK-----------------------WMAPEALFDR 234
Query: 750 GYTQLCDWWSVGVILYEM--LVGSP 772
YT D WS GV+++E+ L GSP
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 38.9 bits (89), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 52/145 (35%)
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGR 689
+L +E + IHRD+ N+L+ + +K+ DFGL R +N YY+ +GR
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA---RDINNIDYYKKT-TNGR 220
Query: 690 QDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT 749
P+K ++APE L
Sbjct: 221 L-----------------------PVK-----------------------WMAPEALFDR 234
Query: 750 GYTQLCDWWSVGVILYEM--LVGSP 772
YT D WS GV+++E+ L GSP
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 52/145 (35%)
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGR 689
+L +E + IHRD+ N+L+ + +K+ DFGL R +N YY+ +GR
Sbjct: 157 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA---RDINNIDYYKKT-TNGR 212
Query: 690 QDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT 749
P+K ++APE L
Sbjct: 213 L-----------------------PVK-----------------------WMAPEALFDR 226
Query: 750 GYTQLCDWWSVGVILYEM--LVGSP 772
YT D WS GV+++E+ L GSP
Sbjct: 227 VYTHQSDVWSFGVLMWEIFTLGGSP 251
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 52/145 (35%)
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGR 689
+L +E + IHRD+ N+L+ + +K+ DFGL R +N YY+ +GR
Sbjct: 154 QLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLA---RDINNIDYYKKT-TNGR 209
Query: 690 QDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT 749
P+K ++APE L
Sbjct: 210 L-----------------------PVK-----------------------WMAPEALFDR 223
Query: 750 GYTQLCDWWSVGVILYEM--LVGSP 772
YT D WS GV+++E+ L GSP
Sbjct: 224 VYTHQSDVWSFGVLMWEIFTLGGSP 248
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/145 (25%), Positives = 56/145 (38%), Gaps = 52/145 (35%)
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGR 689
+L +E + IHRD+ N+L+ + +K+ DFGL R +N YY+ +GR
Sbjct: 152 QLARGMEYLASQKCIHRDLTARNVLVTENNVMKIADFGLA---RDINNIDYYKKT-TNGR 207
Query: 690 QDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT 749
P+K ++APE L
Sbjct: 208 L-----------------------PVK-----------------------WMAPEALFDR 221
Query: 750 GYTQLCDWWSVGVILYEM--LVGSP 772
YT D WS GV+++E+ L GSP
Sbjct: 222 VYTHQSDVWSFGVLMWEIFTLGGSP 246
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 38.9 bits (89), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 43/196 (21%), Positives = 77/196 (39%), Gaps = 61/196 (31%)
Query: 598 YFVMDYIPGGDLMSLLIK-KGIFEEP-----LARFYIA-ELTCAVESVHKMGFIHRDIKP 650
+ +++ + GGDL S L + + +P L ++A ++ C + + + FIHRDI
Sbjct: 101 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 160
Query: 651 DNILIDRDGH---IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
N L+ G K+ DFG+ R + + YY+ G
Sbjct: 161 RNCLLTCPGPGRVAKIGDFGMA---RDIYRASYYRKGG---------------------- 195
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 767
C P+K ++ PE + +T D WS GV+L+E+
Sbjct: 196 --CAMLPVK-----------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEI 230
Query: 768 L-VGSPPFLANTSAET 782
+G P+ + ++ E
Sbjct: 231 FSLGYMPYPSKSNQEV 246
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 26/45 (57%), Gaps = 5/45 (11%)
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGH-----IKLTDFGLC 669
+L +E VH I+RD+KP+N LI R G+ I + DFGL
Sbjct: 113 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFGLA 157
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 26/164 (15%)
Query: 523 LVRKIDTNHLYVMKTIYKCVGVFGEVTLVR---------KIDTNHLYVMKTIYKCVGAFG 573
+++D ++ + K + G FGEV R + L V T + G
Sbjct: 9 FAKELDATNISIDKVV--GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 66
Query: 574 EVTLVRKIDTNHLYVMKG--SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
E +++ + D ++ ++G + + V + + G L S L K A+F + +L
Sbjct: 67 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD------AQFTVIQL 120
Query: 632 TCAVESV-------HKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
+ + MG++HRD+ NILI+ + K++DFGL
Sbjct: 121 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 164
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFE-EPLARFYIA-ELTCAVESVHKMGFIHRDIKPDNIL 654
Y + +++ G+L+ L + E + Y+A +++ A+E + K FIHR++ N L
Sbjct: 291 FYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCL 350
Query: 655 IDRDGHIKLTDFGL 668
+ + +K+ DFGL
Sbjct: 351 VGENHLVKVADFGL 364
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFE-EPLARFYIA-ELTCAVESVHKMGFIHRDIKPDNIL 654
Y + +++ G+L+ L + E + Y+A +++ A+E + K FIHR++ N L
Sbjct: 288 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCL 347
Query: 655 IDRDGHIKLTDFGL 668
+ + +K+ DFGL
Sbjct: 348 VGENHLVKVADFGL 361
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 78/231 (33%), Gaps = 77/231 (33%)
Query: 628 IAELTCAVESVHKMGFIHRDIKPDNILIDRDG-------------HIKLTDFGLCTGFRW 674
+ ++ V +H + IHRD+KP NIL+ I ++DFGLC
Sbjct: 121 LRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLC----- 175
Query: 675 THNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSL 734
K S R + PS
Sbjct: 176 ----KKLDSGQXXFRXNLNNPS-------------------------------------- 193
Query: 735 VGTPNYIAPEVLLRTG-------YTQLCDWWSVGVILYEMLV-GSPPFLANTSAETQYK- 785
GT + APE+L + T+ D +S+G + Y +L G PF S E+
Sbjct: 194 -GTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKYSRESNIIR 252
Query: 786 ---VINWESCLHIPAEAQLSPEGADLILQLCTGADKRLGKNASEVKAHPFF 833
++ CLH + L E DLI Q+ D A +V HP F
Sbjct: 253 GIFSLDEMKCLH---DRSLIAEATDLISQM-IDHDPLKRPTAMKVLRHPLF 299
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 38.9 bits (89), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 595 NNLYFVMDYIPGG---DLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
N L+ V ++ G DL+ G+ E +A + + + A++ +H MG++HR +K
Sbjct: 99 NELWVVTSFMAYGSAKDLICTHFMDGMNELAIA-YILQGVLKALDYIHHMGYVHRSVKAS 157
Query: 652 NILIDRDGHIKLT 664
+ILI DG + L+
Sbjct: 158 HILISVDGKVYLS 170
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 38.9 bits (89), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 595 NNLYFVMDYIPGG---DLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPD 651
N L+ V ++ G DL+ G+ E +A + + + A++ +H MG++HR +K
Sbjct: 83 NELWVVTSFMAYGSAKDLICTHFMDGMNELAIA-YILQGVLKALDYIHHMGYVHRSVKAS 141
Query: 652 NILIDRDGHIKLT 664
+ILI DG + L+
Sbjct: 142 HILISVDGKVYLS 154
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 27/42 (64%), Gaps = 3/42 (7%)
Query: 632 TC-AVESVHKMG--FIHRDIKPDNILIDRDGHIKLTDFGLCT 670
TC AV+ +H+ IHRD+K +N+L+ G IKL DFG T
Sbjct: 145 TCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSAT 186
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 38.5 bits (88), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFE-EPLARFYIA-ELTCAVESVHKMGFIHRDIKPDNIL 654
Y + +++ G+L+ L + E + Y+A +++ A+E + K FIHR++ N L
Sbjct: 330 FYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCL 389
Query: 655 IDRDGHIKLTDFGL 668
+ + +K+ DFGL
Sbjct: 390 VGENHLVKVADFGL 403
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/189 (22%), Positives = 74/189 (39%), Gaps = 58/189 (30%)
Query: 590 KGSPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIA---ELTCAVESVHKMGFIHR 646
+G PH ++ Y+ GDL+ + + P + I+ ++ +E + + F+HR
Sbjct: 95 EGLPH----VLLPYMCHGDLLQFI--RSPQRNPTVKDLISFGLQVARGMEYLAEQKFVHR 148
Query: 647 DIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQ 706
D+ N ++D +K+ DFGL R + +YY Q
Sbjct: 149 DLAARNCMLDESFTVKVADFGLA---RDILDREYYSV----------------------Q 183
Query: 707 ECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYE 766
+ R P+K + A E L +T D WS GV+L+E
Sbjct: 184 QHRHARLPVK-----------------------WTALESLQTYRFTTKSDVWSFGVLLWE 220
Query: 767 MLV-GSPPF 774
+L G+PP+
Sbjct: 221 LLTRGAPPY 229
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 71/164 (43%), Gaps = 26/164 (15%)
Query: 523 LVRKIDTNHLYVMKTIYKCVGVFGEVTLVR---------KIDTNHLYVMKTIYKCVGAFG 573
+++D ++ + K + G FGEV R + L V T + G
Sbjct: 38 FAKELDATNISIDKVV--GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 574 EVTLVRKIDTNHLYVMKG--SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
E +++ + D ++ ++G + + V + + G L S L K A+F + +L
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD------AQFTVIQL 149
Query: 632 TCAVESV-------HKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
+ + MG++HRD+ NILI+ + K++DFGL
Sbjct: 150 VGMLRGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGL 193
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 38.5 bits (88), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 53/265 (20%), Positives = 101/265 (38%), Gaps = 65/265 (24%)
Query: 542 VGVFGEVTLVRKIDTNHLYV--MKTIYKCVGAF-GEVTLVRKIDTNHLYVMKG--SPHNN 596
G FGEV + ++ + V +K V AF E L++ + + L + +
Sbjct: 22 AGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKEEP 81
Query: 597 LYFVMDYIPGGDLMSLLI--KKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNIL 654
+Y + +++ G L+ L + G P + A++ + + + +IHRD++ N+L
Sbjct: 82 IYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIERKNYIHRDLRAANVL 141
Query: 655 IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSP 714
+ K+ DFGL R +++Y G P
Sbjct: 142 VSESLMCKIADFGLA---RVIEDNEYTAREG-------------------------AKFP 173
Query: 715 LKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLV-GSPP 773
+K + APE + +T + WS G++LYE++ G P
Sbjct: 174 IK-----------------------WTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIP 210
Query: 774 FLANTSAETQ------YKVINWESC 792
+ T+A+ Y++ E+C
Sbjct: 211 YPGRTNADVMSALSQGYRMPRMENC 235
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 38.5 bits (88), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 48/131 (36%), Gaps = 50/131 (38%)
Query: 638 VHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSE 697
+H IHRD+K NIL+D + K+TDFG+
Sbjct: 155 LHTRAIIHRDVKSINILLDENFVPKITDFGIS---------------------------- 186
Query: 698 EWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDW 757
+GT Q L + GT YI PE ++ T+ D
Sbjct: 187 --KKGT--------------------ELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDV 224
Query: 758 WSVGVILYEML 768
+S GV+L+E+L
Sbjct: 225 YSFGVVLFEVL 235
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 38.1 bits (87), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 33/131 (25%), Positives = 48/131 (36%), Gaps = 50/131 (38%)
Query: 638 VHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSE 697
+H IHRD+K NIL+D + K+TDFG+
Sbjct: 155 LHTRAIIHRDVKSINILLDENFVPKITDFGIS---------------------------- 186
Query: 698 EWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDW 757
+GT Q L + GT YI PE ++ T+ D
Sbjct: 187 --KKGT--------------------ELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDV 224
Query: 758 WSVGVILYEML 768
+S GV+L+E+L
Sbjct: 225 YSFGVVLFEVL 235
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 81/212 (38%), Gaps = 56/212 (26%)
Query: 628 IAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
+ +++ ++ + + F+HRD+ N+L+ + K++DFGL R N YY++ H
Sbjct: 133 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQ-TH 189
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
G+ W P+K + APE +
Sbjct: 190 GK---------W--------------PVK-----------------------WYAPECIN 203
Query: 748 RTGYTQLCDWWSVGVILYEML-VGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGA 806
++ D WS GV+++E G P+ +E + E + A E
Sbjct: 204 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML---EKGERMGCPAGCPREMY 260
Query: 807 DLILQLCTGAD--KRLGKNASEVKAHPFFSNV 836
DL + LC D R G A E++ ++ +V
Sbjct: 261 DL-MNLCWTYDVENRPGFAAVELRLRNYYYDV 291
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 38.1 bits (87), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 81/212 (38%), Gaps = 56/212 (26%)
Query: 628 IAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
+ +++ ++ + + F+HRD+ N+L+ + K++DFGL R N YY++ H
Sbjct: 133 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQ-TH 189
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
G+ W P+K + APE +
Sbjct: 190 GK---------W--------------PVK-----------------------WYAPECIN 203
Query: 748 RTGYTQLCDWWSVGVILYEML-VGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGA 806
++ D WS GV+++E G P+ +E + E + A E
Sbjct: 204 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML---EKGERMGCPAGCPREMY 260
Query: 807 DLILQLCTGAD--KRLGKNASEVKAHPFFSNV 836
DL + LC D R G A E++ ++ +V
Sbjct: 261 DL-MNLCWTYDVENRPGFAAVELRLRNYYYDV 291
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 56/145 (38%), Gaps = 52/145 (35%)
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGR 689
+L +E + IHRD+ N+L+ + +++ DFGL R +N YY+ +GR
Sbjct: 165 QLARGMEYLASQKCIHRDLAARNVLVTENNVMRIADFGLA---RDINNIDYYKKT-TNGR 220
Query: 690 QDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRT 749
P+K ++APE L
Sbjct: 221 L-----------------------PVK-----------------------WMAPEALFDR 234
Query: 750 GYTQLCDWWSVGVILYEM--LVGSP 772
YT D WS GV+++E+ L GSP
Sbjct: 235 VYTHQSDVWSFGVLMWEIFTLGGSP 259
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/195 (21%), Positives = 76/195 (38%), Gaps = 61/195 (31%)
Query: 598 YFVMDYIPGGDLMSLLIK-KGIFEEP-----LARFYIA-ELTCAVESVHKMGFIHRDIKP 650
+ +++ + GGDL S L + + +P L ++A ++ C + + + FIHRDI
Sbjct: 110 FILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAA 169
Query: 651 DNILIDRDGH---IKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQE 707
N L+ G K+ DFG+ + + YY+ G
Sbjct: 170 RNCLLTCPGPGRVAKIGDFGMAQDI---YRASYYRKGG---------------------- 204
Query: 708 CRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM 767
C P+K ++ PE + +T D WS GV+L+E+
Sbjct: 205 --CAMLPVK-----------------------WMPPEAFMEGIFTSKTDTWSFGVLLWEI 239
Query: 768 L-VGSPPFLANTSAE 781
+G P+ + ++ E
Sbjct: 240 FSLGYMPYPSKSNQE 254
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 38.1 bits (87), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 574 EVTLVRKIDTNHLYVMKG-SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL- 631
E ++ ++D ++ + G L VM+ GG L L+ K E + +AEL
Sbjct: 60 EAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGK---REEIPVSNVAELL 116
Query: 632 ---TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
+ ++ + + F+HRD+ N+L+ + K++DFGL
Sbjct: 117 HQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGL 156
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 38.1 bits (87), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 81/212 (38%), Gaps = 56/212 (26%)
Query: 628 IAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
+ +++ ++ + + F+HRD+ N+L+ + K++DFGL R N YY++ H
Sbjct: 123 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQ-TH 179
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
G+ W P+K + APE +
Sbjct: 180 GK---------W--------------PVK-----------------------WYAPECIN 193
Query: 748 RTGYTQLCDWWSVGVILYEML-VGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGA 806
++ D WS GV+++E G P+ +E + E + A E
Sbjct: 194 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML---EKGERMGCPAGCPREMY 250
Query: 807 DLILQLCTGAD--KRLGKNASEVKAHPFFSNV 836
DL + LC D R G A E++ ++ +V
Sbjct: 251 DL-MNLCWTYDVENRPGFAAVELRLRNYYYDV 281
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 81/212 (38%), Gaps = 56/212 (26%)
Query: 628 IAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
+ +++ ++ + + F+HRD+ N+L+ + K++DFGL R N YY++ H
Sbjct: 131 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQ-TH 187
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
G+ W P+K + APE +
Sbjct: 188 GK---------W--------------PVK-----------------------WYAPECIN 201
Query: 748 RTGYTQLCDWWSVGVILYEML-VGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGA 806
++ D WS GV+++E G P+ +E + E + A E
Sbjct: 202 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML---EKGERMGCPAGCPREMY 258
Query: 807 DLILQLCTGAD--KRLGKNASEVKAHPFFSNV 836
DL + LC D R G A E++ ++ +V
Sbjct: 259 DL-MNLCWTYDVENRPGFAAVELRLRNYYYDV 289
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 38.1 bits (87), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 78/222 (35%), Gaps = 71/222 (31%)
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHG 688
AE+ + ++ F+HRD+ N ++ D +K+ DFG+ R + + YY+ G
Sbjct: 136 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT---RDIYETDYYRKGGKG- 191
Query: 689 RQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLR 748
L P+ ++APE L
Sbjct: 192 --------------------------LLPV--------------------RWMAPESLKD 205
Query: 749 TGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQL------S 802
+T D WS GV+L+E+ + AE Y+ ++ E L +
Sbjct: 206 GVFTTSSDMWSFGVVLWEI---------TSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 256
Query: 803 PEGADLILQLCTGADKRLGKNASEV------KAHPFFSNVDF 838
PE ++++C + ++ E+ HP F V F
Sbjct: 257 PERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 298
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 38.1 bits (87), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 81/212 (38%), Gaps = 56/212 (26%)
Query: 628 IAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
+ +++ ++ + + F+HRD+ N+L+ + K++DFGL R N YY++ H
Sbjct: 113 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQ-TH 169
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
G+ W P+K + APE +
Sbjct: 170 GK---------W--------------PVK-----------------------WYAPECIN 183
Query: 748 RTGYTQLCDWWSVGVILYEML-VGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGA 806
++ D WS GV+++E G P+ +E + E + A E
Sbjct: 184 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML---EKGERMGCPAGCPREMY 240
Query: 807 DLILQLCTGAD--KRLGKNASEVKAHPFFSNV 836
DL + LC D R G A E++ ++ +V
Sbjct: 241 DL-MNLCWTYDVENRPGFAAVELRLRNYYYDV 271
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 37.7 bits (86), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 78/222 (35%), Gaps = 71/222 (31%)
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHG 688
AE+ + ++ F+HRD+ N ++ D +K+ DFG+ R + + YY+ G
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT---RDIYETAYYRKGGKG- 192
Query: 689 RQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLR 748
L P+ ++APE L
Sbjct: 193 --------------------------LLPV--------------------RWMAPESLKD 206
Query: 749 TGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQL------S 802
+T D WS GV+L+E+ + AE Y+ ++ E L +
Sbjct: 207 GVFTTSSDMWSFGVVLWEI---------TSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 257
Query: 803 PEGADLILQLCTGADKRLGKNASEV------KAHPFFSNVDF 838
PE ++++C + ++ E+ HP F V F
Sbjct: 258 PERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 299
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/224 (19%), Positives = 84/224 (37%), Gaps = 54/224 (24%)
Query: 569 VGAFGEVTLVRKIDTNHLYVMKG--SPHNNLYFVMDYIPGGDLMSLLIKK-GIFEEPLAR 625
V GE ++ + +++ ++G S + + + +Y+ G L L +K G F
Sbjct: 91 VDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQLV 150
Query: 626 FYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
+ + ++ + M ++HRD+ NIL++ + K++DFGL + Y S G
Sbjct: 151 GMLRGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGG 210
Query: 686 DHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEV 745
P++ + APE
Sbjct: 211 --------------------------KIPIR-----------------------WTAPEA 221
Query: 746 LLRTGYTQLCDWWSVGVILYE-MLVGSPPFLANTSAETQYKVIN 788
+ +T D WS G++++E M G P+ ++ E K IN
Sbjct: 222 ISYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHEVM-KAIN 264
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 37.7 bits (86), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/222 (19%), Positives = 78/222 (35%), Gaps = 71/222 (31%)
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHG 688
AE+ + ++ F+HRD+ N ++ D +K+ DFG+ R + + YY+ G
Sbjct: 137 AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMT---RDIYETDYYRKGGKG- 192
Query: 689 RQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLR 748
L P+ ++APE L
Sbjct: 193 --------------------------LLPV--------------------RWMAPESLKD 206
Query: 749 TGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQL------S 802
+T D WS GV+L+E+ + AE Y+ ++ E L +
Sbjct: 207 GVFTTSSDMWSFGVVLWEI---------TSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 257
Query: 803 PEGADLILQLCTGADKRLGKNASEV------KAHPFFSNVDF 838
PE ++++C + ++ E+ HP F V F
Sbjct: 258 PERVTDLMRMCWQFNPKMRPTFLEIVNLLKDDLHPSFPEVSF 299
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 37.7 bits (86), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 81/212 (38%), Gaps = 56/212 (26%)
Query: 628 IAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
+ +++ ++ + + F+HRD+ N+L+ + K++DFGL R N YY++ H
Sbjct: 117 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQ-TH 173
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
G+ W P+K + APE +
Sbjct: 174 GK---------W--------------PVK-----------------------WYAPECIN 187
Query: 748 RTGYTQLCDWWSVGVILYEML-VGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGA 806
++ D WS GV+++E G P+ +E + E + A E
Sbjct: 188 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML---EKGERMGCPAGCPREMY 244
Query: 807 DLILQLCTGAD--KRLGKNASEVKAHPFFSNV 836
DL + LC D R G A E++ ++ +V
Sbjct: 245 DL-MNLCWTYDVENRPGFAAVELRLRNYYYDV 275
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 45/212 (21%), Positives = 81/212 (38%), Gaps = 56/212 (26%)
Query: 628 IAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
+ +++ ++ + + F+HRD+ N+L+ + K++DFGL R N YY++ H
Sbjct: 111 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQ-TH 167
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
G+ W P+K + APE +
Sbjct: 168 GK---------W--------------PVK-----------------------WYAPECIN 181
Query: 748 RTGYTQLCDWWSVGVILYEML-VGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGA 806
++ D WS GV+++E G P+ +E + E + A E
Sbjct: 182 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAML---EKGERMGCPAGCPREMY 238
Query: 807 DLILQLCTGAD--KRLGKNASEVKAHPFFSNV 836
DL + LC D R G A E++ ++ +V
Sbjct: 239 DL-MNLCWTYDVENRPGFAAVELRLRNYYYDV 269
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 37.7 bits (86), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 84/230 (36%), Gaps = 70/230 (30%)
Query: 600 VMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESV--------HKMGF------IH 645
+ +Y GDL++ L +K E F IA T + + M F IH
Sbjct: 128 ITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSSQVAQGMAFLASKNCIH 187
Query: 646 RDIKPDNILIDRDGHI-KLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTP 704
RD+ N+L+ +GH+ K+ DFGL +D M S +G
Sbjct: 188 RDVAARNVLLT-NGHVAKIGDFGLA--------------------RDIMNDSNYIVKGNA 226
Query: 705 GQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 764
P+K ++APE + YT D WS G++L
Sbjct: 227 -------RLPVK-----------------------WMAPESIFDCVYTVQSDVWSYGILL 256
Query: 765 YEML-VGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC 813
+E+ +G P+ YK++ + PA +P+ I+Q C
Sbjct: 257 WEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPA---FAPKNIYSIMQAC 303
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 37.7 bits (86), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHNN-LYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAEL 631
E +++ +D H+ + G + +M+ P G+L L + K + Y ++
Sbjct: 75 EAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQI 134
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSN 684
A+ + + +HRDI NIL+ +KL DFGL R+ + YY+++
Sbjct: 135 CKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS---RYIEDEDYYKAS 184
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 37.7 bits (86), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 53/114 (46%), Gaps = 5/114 (4%)
Query: 573 GEVTLVRKIDTNHLYVMKGSPHNN-LYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAE 630
E +++ +D H+ + G + +M+ P G+L L + K + Y +
Sbjct: 58 SEAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQ 117
Query: 631 LTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSN 684
+ A+ + + +HRDI NIL+ +KL DFGL R+ + YY+++
Sbjct: 118 ICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS---RYIEDEDYYKAS 168
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 45/189 (23%), Positives = 74/189 (39%), Gaps = 29/189 (15%)
Query: 606 GGDLMSLLIKKGIFEEPL--ARFYIAELTCAVESVH-KMGFIHRDIKPDNILID-RDGHI 661
G L+ +IK PL + I ++ ++ +H K IH DIKP+NIL+ + +I
Sbjct: 112 GHHLLKWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYI 171
Query: 662 KLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKP---- 717
+ R + +Q +G + PS P + +PL+P
Sbjct: 172 R----------RLAAEATEWQRSG------APPPSGSAVSTAPATAGNFLVNPLEPKNAE 215
Query: 718 -LXXXXXXXHQRCLAHSL----VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSP 772
L C H + T Y + EVL+ +GY D WS + +E+ G
Sbjct: 216 KLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDY 275
Query: 773 PFLANTSAE 781
F ++ E
Sbjct: 276 LFEPHSGEE 284
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 60/162 (37%), Gaps = 56/162 (34%)
Query: 617 GIFEEPLAR----FYIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGF 672
G ++EP+ Y ++ +E + IHRD+ NIL+ + +K+ DFGL
Sbjct: 190 GFYKEPITMEDLISYSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLA--- 246
Query: 673 RWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAH 732
R + + Y GD PLK
Sbjct: 247 RDIYKNPDYVRKGD------------------------TRLPLK---------------- 266
Query: 733 SLVGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEM--LVGSP 772
++APE + Y+ D WS GV+L+E+ L GSP
Sbjct: 267 -------WMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSP 301
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 32/145 (22%), Positives = 57/145 (39%), Gaps = 51/145 (35%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
F+HRD+ N L+ + +K+ DFGL R +++ YY+++G+ D++
Sbjct: 195 FVHRDLATRNCLVGENMVVKIADFGLS---RNIYSADYYKADGN----DAI--------- 238
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P++ ++ PE + YT D W+ GV
Sbjct: 239 -----------PIR-----------------------WMPPESIFYNRYTTESDVWAYGV 264
Query: 763 ILYEML-VGSPPFLANTSAETQYKV 786
+L+E+ G P+ E Y V
Sbjct: 265 VLWEIFSYGLQPYYGMAHEEVIYYV 289
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 37.4 bits (85), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 53/113 (46%), Gaps = 5/113 (4%)
Query: 574 EVTLVRKIDTNHLYVMKGSPHNN-LYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAEL 631
E +++ +D H+ + G + +M+ P G+L L + K + Y ++
Sbjct: 63 EAVIMKNLDHPHIVKLIGIIEEEPTWIIMELYPYGELGHYLERNKNSLKVLTLVLYSLQI 122
Query: 632 TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSN 684
A+ + + +HRDI NIL+ +KL DFGL R+ + YY+++
Sbjct: 123 CKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLS---RYIEDEDYYKAS 172
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 37.4 bits (85), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/76 (28%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 597 LYFVMDYIPGGDLMSLLIKKG----IFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDN 652
+ V +Y+ G L+ L KG P A++ + V +M ++HRD++ N
Sbjct: 77 IXIVTEYMSKGSLLDFL--KGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAAN 134
Query: 653 ILIDRDGHIKLTDFGL 668
IL+ + K+ DFGL
Sbjct: 135 ILVGENLVCKVADFGL 150
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 37.4 bits (85), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 40/171 (23%), Positives = 67/171 (39%), Gaps = 27/171 (15%)
Query: 622 PLARFYIAELTCAVESVH-KMGFIHRDIKPDNILID-RDGHIKLTDFGLCTGFRWTHNSK 679
P + I ++ ++ +H K IH DIKP+NIL+ + +I+ R +
Sbjct: 146 PCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIR----------RLAAEAT 195
Query: 680 YYQSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKP-----LXXXXXXXHQRCLAHSL 734
+Q +G + PS P + +PL+P L C H
Sbjct: 196 EWQRSG------APPPSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKH 249
Query: 735 ----VGTPNYIAPEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAE 781
+ T Y + EVL+ +GY D WS + +E+ G F ++ E
Sbjct: 250 FTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATGDYLFEPHSGEE 300
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 37.4 bits (85), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 90/240 (37%), Gaps = 71/240 (29%)
Query: 574 EVTLVRKIDTNHLYVMKG--SPHNNLYFVMDYIPGGDLMSLL--IKKGIFEEP------L 623
E +++++ + +H+ + G S +M+ + GDL S L ++ + P L
Sbjct: 68 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 127
Query: 624 ARF--YIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYY 681
++ E+ + ++ F+HRD+ N ++ D +K+ DFG+ R + + YY
Sbjct: 128 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT---RDIYETDYY 184
Query: 682 QSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYI 741
+ G L P+ ++
Sbjct: 185 RKGGKG---------------------------LLPV--------------------RWM 197
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQL 801
+PE L +T D WS GV+L+E+ T AE Y+ ++ E L E L
Sbjct: 198 SPESLKDGVFTTYSDVWSFGVVLWEI---------ATLAEQPYQGLSNEQVLRFVMEGGL 248
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDG-----HIKLTDFGLC 669
+L +E VH I+RD+KP+N L+ R G I + DFGL
Sbjct: 108 QLITRMEYVHTKSLIYRDVKPENFLVGRPGTKRQHAIHIIDFGLA 152
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 37.4 bits (85), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 53/230 (23%), Positives = 84/230 (36%), Gaps = 70/230 (30%)
Query: 600 VMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESV--------HKMGF------IH 645
+ +Y GDL++ L +K E F IA T + + M F IH
Sbjct: 128 ITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQVAQGMAFLASKNCIH 187
Query: 646 RDIKPDNILIDRDGHI-KLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGTP 704
RD+ N+L+ +GH+ K+ DFGL +D M S +G
Sbjct: 188 RDVAARNVLLT-NGHVAKIGDFGLA--------------------RDIMNDSNYIVKGNA 226
Query: 705 GQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVIL 764
P+K ++APE + YT D WS G++L
Sbjct: 227 -------RLPVK-----------------------WMAPESIFDCVYTVQSDVWSYGILL 256
Query: 765 YEML-VGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQLC 813
+E+ +G P+ YK++ + PA +P+ I+Q C
Sbjct: 257 WEIFSLGLNPYPGILVNSKFYKLVKDGYQMAQPA---FAPKNIYSIMQAC 303
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 37.0 bits (84), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 48/240 (20%), Positives = 90/240 (37%), Gaps = 71/240 (29%)
Query: 574 EVTLVRKIDTNHLYVMKG--SPHNNLYFVMDYIPGGDLMSLL--IKKGIFEEP------L 623
E +++++ + +H+ + G S +M+ + GDL S L ++ + P L
Sbjct: 78 EASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSL 137
Query: 624 ARF--YIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYY 681
++ E+ + ++ F+HRD+ N ++ D +K+ DFG+ R + + YY
Sbjct: 138 SKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMT---RDIYETDYY 194
Query: 682 QSNGDHGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYI 741
+ G L P+ ++
Sbjct: 195 RKGGKG---------------------------LLPV--------------------RWM 207
Query: 742 APEVLLRTGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQL 801
+PE L +T D WS GV+L+E+ T AE Y+ ++ E L E L
Sbjct: 208 SPESLKDGVFTTYSDVWSFGVVLWEI---------ATLAEQPYQGLSNEQVLRFVMEGGL 258
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 37.0 bits (84), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 32/58 (55%)
Query: 628 IAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
+ +++ ++ + + F+HRD+ N+L+ + K++DFGL R N Q++G
Sbjct: 117 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHG 174
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 37.0 bits (84), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 46/99 (46%), Gaps = 3/99 (3%)
Query: 598 YFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAELTCAVESVHKMGFIHRDIKPDNILIDR 657
+ VM+ + G DL + + G F++ + +E +H+ ++H DIK N+L+
Sbjct: 128 FMVMERL-GIDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIKAANLLLGY 186
Query: 658 DG--HIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSME 694
+ L D+GL + N K YQ N G ++E
Sbjct: 187 KNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIE 225
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 37.0 bits (84), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 49/133 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
F+HRD+ N ++D +K+ DFGL R ++ +YY + G +
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNKTGAK------------ 198
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E L +T D WS GV
Sbjct: 199 ----------LPVK-----------------------WMALESLQTQKFTTKSDVWSFGV 225
Query: 763 ILYEMLV-GSPPF 774
+L+E++ G+PP+
Sbjct: 226 LLWELMTRGAPPY 238
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 49/133 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
F+HRD+ N ++D +K+ DFGL R ++ +YY + G +
Sbjct: 146 FVHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNKTGAK------------ 190
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E L +T D WS GV
Sbjct: 191 ----------LPVK-----------------------WMALESLQTQKFTTKSDVWSFGV 217
Query: 763 ILYEMLV-GSPPF 774
+L+E++ G+PP+
Sbjct: 218 LLWELMTRGAPPY 230
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 37.0 bits (84), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 49/133 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
F+HRD+ N ++D +K+ DFGL R ++ +YY + G +
Sbjct: 154 FVHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNKTGAK------------ 198
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E L +T D WS GV
Sbjct: 199 ----------LPVK-----------------------WMALESLQTQKFTTKSDVWSFGV 225
Query: 763 ILYEMLV-GSPPF 774
+L+E++ G+PP+
Sbjct: 226 LLWELMTRGAPPY 238
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 49/133 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
F+HRD+ N ++D +K+ DFGL R ++ +YY + G +
Sbjct: 151 FVHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNKTGAK------------ 195
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E L +T D WS GV
Sbjct: 196 ----------LPVK-----------------------WMALESLQTQKFTTKSDVWSFGV 222
Query: 763 ILYEMLV-GSPPF 774
+L+E++ G+PP+
Sbjct: 223 LLWELMTRGAPPY 235
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 37.0 bits (84), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 49/133 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
F+HRD+ N ++D +K+ DFGL R ++ +YY + G +
Sbjct: 153 FVHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNKTGAK------------ 197
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E L +T D WS GV
Sbjct: 198 ----------LPVK-----------------------WMALESLQTQKFTTKSDVWSFGV 224
Query: 763 ILYEMLV-GSPPF 774
+L+E++ G+PP+
Sbjct: 225 LLWELMTRGAPPY 237
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 37.0 bits (84), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 49/133 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
F+HRD+ N ++D +K+ DFGL R ++ +YY + G +
Sbjct: 172 FVHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNKTGAK------------ 216
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E L +T D WS GV
Sbjct: 217 ----------LPVK-----------------------WMALESLQTQKFTTKSDVWSFGV 243
Query: 763 ILYEMLV-GSPPF 774
+L+E++ G+PP+
Sbjct: 244 LLWELMTRGAPPY 256
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 37.0 bits (84), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 49/133 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
F+HRD+ N ++D +K+ DFGL R ++ +YY + G +
Sbjct: 173 FVHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNKTGAK------------ 217
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E L +T D WS GV
Sbjct: 218 ----------LPVK-----------------------WMALESLQTQKFTTKSDVWSFGV 244
Query: 763 ILYEMLV-GSPPF 774
+L+E++ G+PP+
Sbjct: 245 LLWELMTRGAPPY 257
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 37.0 bits (84), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 60/155 (38%), Gaps = 50/155 (32%)
Query: 628 IAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
+ +++ ++ + + F+HRD+ N+L+ + K++DFGL R N YY++ H
Sbjct: 475 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQ-TH 531
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
G+ W P+K + APE +
Sbjct: 532 GK---------W--------------PVK-----------------------WYAPECIN 545
Query: 748 RTGYTQLCDWWSVGVILYEML-VGSPPFLANTSAE 781
++ D WS GV+++E G P+ +E
Sbjct: 546 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 580
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 37.0 bits (84), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 32/155 (20%), Positives = 60/155 (38%), Gaps = 50/155 (32%)
Query: 628 IAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDH 687
+ +++ ++ + + F+HRD+ N+L+ + K++DFGL R N YY++ H
Sbjct: 476 VHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADEN--YYKAQ-TH 532
Query: 688 GRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLL 747
G+ W P+K + APE +
Sbjct: 533 GK---------W--------------PVK-----------------------WYAPECIN 546
Query: 748 RTGYTQLCDWWSVGVILYEML-VGSPPFLANTSAE 781
++ D WS GV+++E G P+ +E
Sbjct: 547 YYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 581
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 37.0 bits (84), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 58/247 (23%), Positives = 86/247 (34%), Gaps = 77/247 (31%)
Query: 597 LYFVMDYIPGGDLMSLL-IKKGIF---------------EEPLARFYIAELTCAVESVHK 640
+Y + +Y GDL++ L K+ F EE L +L C V K
Sbjct: 124 IYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFEDLLCFAYQVAK 183
Query: 641 -MGF------IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSM 693
M F +HRD+ N+L+ +K+ DFGL +D M
Sbjct: 184 GMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLA--------------------RDIM 223
Query: 694 EPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQ 753
S +G P+K ++APE L YT
Sbjct: 224 SDSNYVVRGNA-------RLPVK-----------------------WMAPESLFEGIYTI 253
Query: 754 LCDWWSVGVILYEML-VGSPPFLANTSAETQYKVINWESCLHIPAEAQLSPEGADLILQL 812
D WS G++L+E+ +G P+ YK+I + P A E +I+Q
Sbjct: 254 KSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYA---TEEIYIIMQS 310
Query: 813 CTGADKR 819
C D R
Sbjct: 311 CWAFDSR 317
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 36.6 bits (83), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 49/133 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
F+HRD+ N ++D +K+ DFGL R ++ +YY + G +
Sbjct: 152 FVHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNKTGAK------------ 196
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E L +T D WS GV
Sbjct: 197 ----------LPVK-----------------------WMALESLQTQKFTTKSDVWSFGV 223
Query: 763 ILYEMLV-GSPPF 774
+L+E++ G+PP+
Sbjct: 224 LLWELMTRGAPPY 236
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 38/164 (23%), Positives = 70/164 (42%), Gaps = 26/164 (15%)
Query: 523 LVRKIDTNHLYVMKTIYKCVGVFGEVTLVR---------KIDTNHLYVMKTIYKCVGAFG 573
+++D ++ + K + G FGEV R + L V T + G
Sbjct: 38 FAKELDATNISIDKVV--GAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLG 95
Query: 574 EVTLVRKIDTNHLYVMKG--SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL 631
E +++ + D ++ ++G + + V + + G L S L K A+F + +L
Sbjct: 96 EASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKHD------AQFTVIQL 149
Query: 632 TCAVESV-------HKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
+ + MG +HRD+ NILI+ + K++DFGL
Sbjct: 150 VGMLRGIASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGL 193
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 33/161 (20%), Positives = 58/161 (36%), Gaps = 56/161 (34%)
Query: 641 MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWS 700
+G++HRD+ N+L+D + K++DFGL ++ Y + G
Sbjct: 170 LGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGG--------------- 214
Query: 701 QGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 760
P++ + APE + ++ D WS
Sbjct: 215 -----------KIPIR-----------------------WTAPEAIAFRTFSSASDVWSF 240
Query: 761 GVILYEMLV-GSPPFLANT------SAETQYKVINWESCLH 794
GV+++E+L G P+ T S E Y++ C H
Sbjct: 241 GVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCPH 281
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 36.6 bits (83), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 52/133 (39%), Gaps = 49/133 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
F+HRD+ N ++D +K+ DFGL R ++ +YY + G +
Sbjct: 149 FVHRDLAARNCMLDEKFTVKVADFGLA---RDMYDKEYYSVHNKTGAK------------ 193
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E L +T D WS GV
Sbjct: 194 ----------LPVK-----------------------WMALESLQTQKFTTKSDVWSFGV 220
Query: 763 ILYEMLV-GSPPF 774
+L+E++ G+PP+
Sbjct: 221 LLWELMTRGAPPY 233
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 36.6 bits (83), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/94 (21%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 578 VRKIDTNHLYVMKG-SPHNNLYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAV 635
+ +D H+ + G P ++L V Y+P G L+ + + +G L + ++ +
Sbjct: 87 IGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGM 146
Query: 636 ESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
+ + G +HR++ N+L+ +++ DFG+
Sbjct: 147 YYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA 180
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 36.6 bits (83), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGH-----IKLTDFGLC 669
+L +E VH I+RD+KP+N LI R G+ I + DF L
Sbjct: 134 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 178
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 36.6 bits (83), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/94 (21%), Positives = 46/94 (48%), Gaps = 2/94 (2%)
Query: 578 VRKIDTNHLYVMKG-SPHNNLYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAV 635
+ +D H+ + G P ++L V Y+P G L+ + + +G L + ++ +
Sbjct: 69 IGSLDHAHIVRLLGLCPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGM 128
Query: 636 ESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLC 669
+ + G +HR++ N+L+ +++ DFG+
Sbjct: 129 YYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVA 162
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 36.6 bits (83), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 5/45 (11%)
Query: 630 ELTCAVESVHKMGFIHRDIKPDNILIDRDGH-----IKLTDFGLC 669
+L +E VH I+RD+KP+N LI R G+ I + DF L
Sbjct: 113 QLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALA 157
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 36.2 bits (82), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 56/159 (35%), Gaps = 59/159 (37%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
F+HRD+ N ++ D +K+ DFG+ R + + YY+ G
Sbjct: 152 FVHRDLAARNCMVAEDFTVKIGDFGMT---RDIYETDYYRKGGKG--------------- 193
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
L P+ +++PE L +T D WS GV
Sbjct: 194 ------------LLPV--------------------RWMSPESLKDGVFTTYSDVWSFGV 221
Query: 763 ILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQL 801
+L+E+ T AE Y+ ++ E L E L
Sbjct: 222 VLWEIA---------TLAEQPYQGLSNEQVLRFVMEGGL 251
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 56/159 (35%), Gaps = 59/159 (37%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
F+HRD+ N ++ D +K+ DFG+ R + + YY+ G
Sbjct: 150 FVHRDLAARNCMVAEDFTVKIGDFGMT---RDIYETDYYRKGGKG--------------- 191
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
L P+ +++PE L +T D WS GV
Sbjct: 192 ------------LLPV--------------------RWMSPESLKDGVFTTYSDVWSFGV 219
Query: 763 ILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQL 801
+L+E+ T AE Y+ ++ E L E L
Sbjct: 220 VLWEI---------ATLAEQPYQGLSNEQVLRFVMEGGL 249
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 36.2 bits (82), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 56/159 (35%), Gaps = 59/159 (37%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
F+HRD+ N ++ D +K+ DFG+ R + + YY+ G
Sbjct: 152 FVHRDLAARNCMVAEDFTVKIGDFGMT---RDIYETDYYRKGGKG--------------- 193
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
L P+ +++PE L +T D WS GV
Sbjct: 194 ------------LLPV--------------------RWMSPESLKDGVFTTYSDVWSFGV 221
Query: 763 ILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQL 801
+L+E+ T AE Y+ ++ E L E L
Sbjct: 222 VLWEI---------ATLAEQPYQGLSNEQVLRFVMEGGL 251
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 36.2 bits (82), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 23/82 (28%), Positives = 42/82 (51%), Gaps = 4/82 (4%)
Query: 588 VMKGSPHNNLYFVMDYIPGGDLMSLLIK-KGIFEEPLARFYIAELTCAVESVHKMGFIHR 646
V +G P + V++++ G L + L K G F + + + + MG++HR
Sbjct: 113 VTRGKP---VMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMRYLADMGYVHR 169
Query: 647 DIKPDNILIDRDGHIKLTDFGL 668
D+ NIL++ + K++DFGL
Sbjct: 170 DLAARNILVNSNLVCKVSDFGL 191
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 36.2 bits (82), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 56/159 (35%), Gaps = 59/159 (37%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
F+HRD+ N ++ D +K+ DFG+ R + + YY+ G
Sbjct: 153 FVHRDLAARNCMVAEDFTVKIGDFGMT---RDIYETDYYRKGGKG--------------- 194
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
L P+ +++PE L +T D WS GV
Sbjct: 195 ------------LLPV--------------------RWMSPESLKDGVFTTYSDVWSFGV 222
Query: 763 ILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQL 801
+L+E+ T AE Y+ ++ E L E L
Sbjct: 223 VLWEI---------ATLAEQPYQGLSNEQVLRFVMEGGL 252
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 36.2 bits (82), Expect = 0.089, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 56/159 (35%), Gaps = 59/159 (37%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
F+HRD+ N ++ D +K+ DFG+ R + + YY+ G
Sbjct: 159 FVHRDLAARNCMVAEDFTVKIGDFGMT---RDIYETDYYRKGGKG--------------- 200
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
L P+ +++PE L +T D WS GV
Sbjct: 201 ------------LLPV--------------------RWMSPESLKDGVFTTYSDVWSFGV 228
Query: 763 ILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQL 801
+L+E+ T AE Y+ ++ E L E L
Sbjct: 229 VLWEIA---------TLAEQPYQGLSNEQVLRFVMEGGL 258
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 36.2 bits (82), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 56/159 (35%), Gaps = 59/159 (37%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
F+HRD+ N ++ D +K+ DFG+ R + + YY+ G
Sbjct: 146 FVHRDLAARNCMVAEDFTVKIGDFGMT---RDIYETDYYRKGGKG--------------- 187
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
L P+ +++PE L +T D WS GV
Sbjct: 188 ------------LLPV--------------------RWMSPESLKDGVFTTYSDVWSFGV 215
Query: 763 ILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQL 801
+L+E+ T AE Y+ ++ E L E L
Sbjct: 216 VLWEI---------ATLAEQPYQGLSNEQVLRFVMEGGL 245
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 35.8 bits (81), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 56/159 (35%), Gaps = 59/159 (37%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
F+HRD+ N ++ D +K+ DFG+ R + + YY+ G
Sbjct: 181 FVHRDLAARNCMVAEDFTVKIGDFGMT---RDIYETDYYRKGGKG--------------- 222
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
L P+ +++PE L +T D WS GV
Sbjct: 223 ------------LLPV--------------------RWMSPESLKDGVFTTYSDVWSFGV 250
Query: 763 ILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQL 801
+L+E+ T AE Y+ ++ E L E L
Sbjct: 251 VLWEIA---------TLAEQPYQGLSNEQVLRFVMEGGL 280
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/173 (22%), Positives = 63/173 (36%), Gaps = 62/173 (35%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
F+HRD+ N + D +K+ DFG+ R + + YY+ G
Sbjct: 146 FVHRDLAARNCXVAEDFTVKIGDFGMT---RDIYETDYYRKGGKG--------------- 187
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
L P+ +++PE L +T D WS GV
Sbjct: 188 ------------LLPV--------------------RWMSPESLKDGVFTTYSDVWSFGV 215
Query: 763 ILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQL--SPEGA-DLILQL 812
+L+E+ T AE Y+ ++ E L E L P+ D++L+L
Sbjct: 216 VLWEI---------ATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLLEL 259
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 574 EVTLVRKIDTNHLYVMKG-SPHNNLYFVMDYIPGGDLMSLLIKKGIFEEPLARFYIAEL- 631
E ++ ++D ++ + G L VM+ GG L L+ K E + +AEL
Sbjct: 386 EAQIMHQLDNPYIVRLIGVCQAEALMLVMEMAGGGPLHKFLVGK---REEIPVSNVAELL 442
Query: 632 ---TCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGL 668
+ ++ + + F+HR++ N+L+ + K++DFGL
Sbjct: 443 HQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGL 482
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFY--IAELTCAVESVHKMGFIHRDIKPDNIL 654
+Y + +Y+ G L+ L + + + A++ + + + +IHRD++ NIL
Sbjct: 87 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 146
Query: 655 IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
+ K+ DFGL R +++Y G
Sbjct: 147 VSDTLSCKIADFGLA---RLIEDNEYTAREG 174
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFY--IAELTCAVESVHKMGFIHRDIKPDNIL 654
+Y + +Y+ G L+ L + + + A++ + + + +IHRD++ NIL
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 147
Query: 655 IDRDGHIKLTDFGLC 669
+ K+ DFGL
Sbjct: 148 VSDTLSCKIADFGLA 162
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFY--IAELTCAVESVHKMGFIHRDIKPDNIL 654
+Y + +Y+ G L+ L + + + A++ + + + +IHRD++ NIL
Sbjct: 90 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 149
Query: 655 IDRDGHIKLTDFGLC 669
+ K+ DFGL
Sbjct: 150 VSDTLSCKIADFGLA 164
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFY--IAELTCAVESVHKMGFIHRDIKPDNIL 654
+Y + +Y+ G L+ L + + + A++ + + + +IHRD++ NIL
Sbjct: 88 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 147
Query: 655 IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
+ K+ DFGL R +++Y G
Sbjct: 148 VSDTLSCKIADFGLA---RLIEDNEYTAREG 175
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 35.8 bits (81), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFY--IAELTCAVESVHKMGFIHRDIKPDNIL 654
+Y + +Y+ G L+ L + + + A++ + + + +IHRD++ NIL
Sbjct: 92 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 151
Query: 655 IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
+ K+ DFGL R +++Y G
Sbjct: 152 VSDTLSCKIADFGLA---RLIEDNEYTAREG 179
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 35.8 bits (81), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFY--IAELTCAVESVHKMGFIHRDIKPDNIL 654
+Y + +Y+ G L+ L + + + A++ + + + +IHRD++ NIL
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 655 IDRDGHIKLTDFGLC 669
+ K+ DFGL
Sbjct: 142 VSDTLSCKIADFGLA 156
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
+HRD+ N+L+ H+K+TDFGL + K Y ++G
Sbjct: 161 LVHRDLAARNVLVKSPNHVKITDFGLARLLE--GDEKEYNADG 201
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFY--IAELTCAVESVHKMGFIHRDIKPDNIL 654
+Y + +Y+ G L+ L + + + A++ + + + +IHRD++ NIL
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 655 IDRDGHIKLTDFGLC 669
+ K+ DFGL
Sbjct: 142 VSDTLSCKIADFGLA 156
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFY--IAELTCAVESVHKMGFIHRDIKPDNIL 654
+Y + +Y+ G L+ L + + + A++ + + + +IHRD++ NIL
Sbjct: 77 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 136
Query: 655 IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
+ K+ DFGL R +++Y G
Sbjct: 137 VSDTLSCKIADFGLA---RLIEDNEYTAREG 164
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 35.4 bits (80), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFY--IAELTCAVESVHKMGFIHRDIKPDNIL 654
+Y + +Y+ G L+ L + + + A++ + + + +IHRD++ NIL
Sbjct: 91 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 150
Query: 655 IDRDGHIKLTDFGLC 669
+ K+ DFGL
Sbjct: 151 VSDTLSCKIADFGLA 165
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 42/91 (46%), Gaps = 5/91 (5%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFY--IAELTCAVESVHKMGFIHRDIKPDNIL 654
+Y + +Y+ G L+ L + + + A++ + + + +IHRD++ NIL
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 655 IDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
+ K+ DFGL R +++Y G
Sbjct: 142 VSDTLSCKIADFGLA---RLIEDNEYTAREG 169
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFY--IAELTCAVESVHKMGFIHRDIKPDNIL 654
+Y + +Y+ G L+ L + + + A++ + + + +IHRD++ NIL
Sbjct: 83 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 142
Query: 655 IDRDGHIKLTDFGLC 669
+ K+ DFGL
Sbjct: 143 VSDTLSCKIADFGLA 157
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFY--IAELTCAVESVHKMGFIHRDIKPDNIL 654
+Y + +Y+ G L+ L + + + A++ + + + +IHRD++ NIL
Sbjct: 84 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 143
Query: 655 IDRDGHIKLTDFGLC 669
+ K+ DFGL
Sbjct: 144 VSDTLSCKIADFGLA 158
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 35.4 bits (80), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/133 (21%), Positives = 49/133 (36%), Gaps = 51/133 (38%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+ N+L+ H+K+TDFGL ++Y+ G
Sbjct: 140 LVHRDLAARNVLVKSPNHVKITDFGLARLLD-IDETEYHADGG----------------- 181
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E +LR +T D WS GV
Sbjct: 182 ---------KVPIK-----------------------WMALESILRRRFTHQSDVWSYGV 209
Query: 763 ILYEMLV-GSPPF 774
++E++ G+ P+
Sbjct: 210 TVWELMTFGAKPY 222
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 2/75 (2%)
Query: 597 LYFVMDYIPGGDLMSLLIKKGIFEEPLARFY--IAELTCAVESVHKMGFIHRDIKPDNIL 654
+Y + +Y+ G L+ L + + + A++ + + + +IHRD++ NIL
Sbjct: 82 IYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERNYIHRDLRAANIL 141
Query: 655 IDRDGHIKLTDFGLC 669
+ K+ DFGL
Sbjct: 142 VSDTLSCKIADFGLA 156
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 35.4 bits (80), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 51/140 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+ N+L+ H+K+TDFGL K Y + G
Sbjct: 172 LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGG---------------- 213
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E +L YT D WS GV
Sbjct: 214 ---------KVPIK-----------------------WMALESILHRIYTHQSDVWSYGV 241
Query: 763 ILYEMLV-GSPPFLANTSAE 781
++E++ GS P+ ++E
Sbjct: 242 TVWELMTFGSKPYDGIPASE 261
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/43 (34%), Positives = 24/43 (55%), Gaps = 2/43 (4%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNG 685
+HRD+ N+L+ H+K+TDFGL + K Y ++G
Sbjct: 138 LVHRDLAARNVLVKSPNHVKITDFGLARLLE--GDEKEYNADG 178
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 53/149 (35%), Gaps = 51/149 (34%)
Query: 627 YIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGD 686
Y ++ +E + IHRD+ NIL+ +K+ DFGL R + Y GD
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKIXDFGLA---RDIYKDPDYVRKGD 205
Query: 687 HGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVL 746
PLK ++APE +
Sbjct: 206 ------------------------ARLPLK-----------------------WMAPETI 218
Query: 747 LRTGYTQLCDWWSVGVILYEML-VGSPPF 774
YT D WS GV+L+E+ +G+ P+
Sbjct: 219 FDRVYTIQSDVWSFGVLLWEIFSLGASPY 247
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 35.4 bits (80), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 51/140 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+ N+L+ H+K+TDFGL K Y + G
Sbjct: 148 LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGG---------------- 189
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E +L YT D WS GV
Sbjct: 190 ---------KVPIK-----------------------WMALESILHRIYTHQSDVWSYGV 217
Query: 763 ILYEMLV-GSPPFLANTSAE 781
++E++ GS P+ ++E
Sbjct: 218 TVWELMTFGSKPYDGIPASE 237
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 35.0 bits (79), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/212 (20%), Positives = 79/212 (37%), Gaps = 55/212 (25%)
Query: 574 EVTLVRKIDTNHLYVMKG-SPHNNLYFVMDYIPGGDLMSLLI--KKGIFEEPLARFYIAE 630
E ++ +D H+ + G + + +M +P G L+ + K I + L + + +
Sbjct: 68 EAYVMASVDNPHVCRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCV-Q 126
Query: 631 LTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQ 690
+ + + +HRD+ N+L+ H+K+TDFGL K Y + G
Sbjct: 127 IAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGG---- 180
Query: 691 DSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTG 750
P+K ++A E +L
Sbjct: 181 ---------------------KVPIK-----------------------WMALESILHRI 196
Query: 751 YTQLCDWWSVGVILYEMLV-GSPPFLANTSAE 781
YT D WS GV ++E++ GS P+ ++E
Sbjct: 197 YTHQSDVWSYGVTVWELMTFGSKPYDGIPASE 228
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 53/149 (35%), Gaps = 51/149 (34%)
Query: 627 YIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGD 686
Y ++ +E + IHRD+ NIL+ +K+ DFGL R + Y GD
Sbjct: 203 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---RDIYKDPDYVRKGD 259
Query: 687 HGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVL 746
PLK ++APE +
Sbjct: 260 ------------------------ARLPLK-----------------------WMAPETI 272
Query: 747 LRTGYTQLCDWWSVGVILYEML-VGSPPF 774
YT D WS GV+L+E+ +G+ P+
Sbjct: 273 FDRVYTIQSDVWSFGVLLWEIFSLGASPY 301
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 51/140 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+ N+L+ H+K+TDFGL K Y + G
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGG---------------- 179
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E +L YT D WS GV
Sbjct: 180 ---------KVPIK-----------------------WMALESILHRIYTHQSDVWSYGV 207
Query: 763 ILYEMLV-GSPPFLANTSAE 781
++E++ GS P+ ++E
Sbjct: 208 TVWELMTFGSKPYDGIPASE 227
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 51/140 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+ N+L+ H+K+TDFGL K Y + G
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGG---------------- 179
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E +L YT D WS GV
Sbjct: 180 ---------KVPIK-----------------------WMALESILHRIYTHQSDVWSYGV 207
Query: 763 ILYEMLV-GSPPFLANTSAE 781
++E++ GS P+ ++E
Sbjct: 208 TVWELMTFGSKPYDGIPASE 227
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 47/132 (35%), Gaps = 51/132 (38%)
Query: 644 IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGT 703
IHRD+ NIL+ +K+ DFGL R + Y GD
Sbjct: 213 IHRDLAARNILLSEKNVVKICDFGLA---RDIYKDPDYVRKGD----------------- 252
Query: 704 PGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 763
PLK ++APE + YT D WS GV+
Sbjct: 253 -------ARLPLK-----------------------WMAPETIFDRVYTIQSDVWSFGVL 282
Query: 764 LYEML-VGSPPF 774
L+E+ +G+ P+
Sbjct: 283 LWEIFSLGASPY 294
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 53/149 (35%), Gaps = 51/149 (34%)
Query: 627 YIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGD 686
Y ++ +E + IHRD+ NIL+ +K+ DFGL R + Y GD
Sbjct: 198 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---RDIYKDPDYVRKGD 254
Query: 687 HGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVL 746
PLK ++APE +
Sbjct: 255 ------------------------ARLPLK-----------------------WMAPETI 267
Query: 747 LRTGYTQLCDWWSVGVILYEML-VGSPPF 774
YT D WS GV+L+E+ +G+ P+
Sbjct: 268 FDRVYTIQSDVWSFGVLLWEIFSLGASPY 296
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 53/149 (35%), Gaps = 51/149 (34%)
Query: 627 YIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGD 686
Y ++ +E + IHRD+ NIL+ +K+ DFGL R + Y GD
Sbjct: 205 YSFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLA---RDIYKDPDYVRKGD 261
Query: 687 HGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVL 746
PLK ++APE +
Sbjct: 262 ------------------------ARLPLK-----------------------WMAPETI 274
Query: 747 LRTGYTQLCDWWSVGVILYEML-VGSPPF 774
YT D WS GV+L+E+ +G+ P+
Sbjct: 275 FDRVYTIQSDVWSFGVLLWEIFSLGASPY 303
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 51/140 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+ N+L+ H+K+TDFGL K Y + G
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGG---------------- 186
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E +L YT D WS GV
Sbjct: 187 ---------KVPIK-----------------------WMALESILHRIYTHQSDVWSYGV 214
Query: 763 ILYEMLV-GSPPFLANTSAE 781
++E++ GS P+ ++E
Sbjct: 215 TVWELMTFGSKPYDGIPASE 234
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 35.0 bits (79), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 51/140 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+ N+L+ H+K+TDFGL K Y + G
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGG---------------- 179
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E +L YT D WS GV
Sbjct: 180 ---------KVPIK-----------------------WMALESILHRIYTHQSDVWSYGV 207
Query: 763 ILYEMLV-GSPPFLANTSAE 781
++E++ GS P+ ++E
Sbjct: 208 TVWELMTFGSKPYDGIPASE 227
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 51/140 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+ N+L+ H+K+TDFGL K Y + G
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGG---------------- 186
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E +L YT D WS GV
Sbjct: 187 ---------KVPIK-----------------------WMALESILHRIYTHQSDVWSYGV 214
Query: 763 ILYEMLV-GSPPFLANTSAE 781
++E++ GS P+ ++E
Sbjct: 215 TVWELMTFGSKPYDGIPASE 234
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 51/140 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+ N+L+ H+K+TDFGL K Y + G
Sbjct: 144 LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGG---------------- 185
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E +L YT D WS GV
Sbjct: 186 ---------KVPIK-----------------------WMALESILHRIYTHQSDVWSYGV 213
Query: 763 ILYEMLV-GSPPFLANTSAE 781
++E++ GS P+ ++E
Sbjct: 214 TVWELMTFGSKPYDGIPASE 233
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 51/140 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+ N+L+ H+K+TDFGL K Y + G
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGG---------------- 182
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E +L YT D WS GV
Sbjct: 183 ---------KVPIK-----------------------WMALESILHRIYTHQSDVWSYGV 210
Query: 763 ILYEMLV-GSPPFLANTSAE 781
++E++ GS P+ ++E
Sbjct: 211 TVWELMTFGSKPYDGIPASE 230
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 51/140 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+ N+L+ H+K+TDFGL K Y + G
Sbjct: 132 LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGG---------------- 173
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E +L YT D WS GV
Sbjct: 174 ---------KVPIK-----------------------WMALESILHRIYTHQSDVWSYGV 201
Query: 763 ILYEMLV-GSPPFLANTSAE 781
++E++ GS P+ ++E
Sbjct: 202 TVWELMTFGSKPYDGIPASE 221
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 51/140 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+ N+L+ H+K+TDFGL K Y + G
Sbjct: 139 LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGG---------------- 180
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E +L YT D WS GV
Sbjct: 181 ---------KVPIK-----------------------WMALESILHRIYTHQSDVWSYGV 208
Query: 763 ILYEMLV-GSPPFLANTSAE 781
++E++ GS P+ ++E
Sbjct: 209 TVWELMTFGSKPYDGIPASE 228
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 51/140 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+ N+L+ H+K+TDFGL K Y + G
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGG---------------- 179
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E +L YT D WS GV
Sbjct: 180 ---------KVPIK-----------------------WMALESILHRIYTHQSDVWSYGV 207
Query: 763 ILYEMLV-GSPPFLANTSAE 781
++E++ GS P+ ++E
Sbjct: 208 TVWELMTFGSKPYDGIPASE 227
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 51/140 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+ N+L+ H+K+TDFGL K Y + G
Sbjct: 138 LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGG---------------- 179
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E +L YT D WS GV
Sbjct: 180 ---------KVPIK-----------------------WMALESILHRIYTHQSDVWSYGV 207
Query: 763 ILYEMLV-GSPPFLANTSAE 781
++E++ GS P+ ++E
Sbjct: 208 TVWELMTFGSKPYDGIPASE 227
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 35.0 bits (79), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 51/140 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+ N+L+ H+K+TDFGL K Y + G
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGG---------------- 182
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E +L YT D WS GV
Sbjct: 183 ---------KVPIK-----------------------WMALESILHRIYTHQSDVWSYGV 210
Query: 763 ILYEMLV-GSPPFLANTSAE 781
++E++ GS P+ ++E
Sbjct: 211 TVWELMTFGSKPYDGIPASE 230
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 51/140 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+ N+L+ H+K+TDFGL K Y + G
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGG---------------- 182
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E +L YT D WS GV
Sbjct: 183 ---------KVPIK-----------------------WMALESILHRIYTHQSDVWSYGV 210
Query: 763 ILYEMLV-GSPPFLANTSAE 781
++E++ GS P+ ++E
Sbjct: 211 TVWELMTFGSKPYDGIPASE 230
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 51/140 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+ N+L+ H+K+TDFGL K Y + G
Sbjct: 141 LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGG---------------- 182
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E +L YT D WS GV
Sbjct: 183 ---------KVPIK-----------------------WMALESILHRIYTHQSDVWSYGV 210
Query: 763 ILYEMLV-GSPPFLANTSAE 781
++E++ GS P+ ++E
Sbjct: 211 TVWELMTFGSKPYDGIPASE 230
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 51/140 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+ N+L+ H+K+TDFGL K Y + G
Sbjct: 145 LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGG---------------- 186
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E +L YT D WS GV
Sbjct: 187 ---------KVPIK-----------------------WMALESILHRIYTHQSDVWSYGV 214
Query: 763 ILYEMLV-GSPPFLANTSAE 781
++E++ GS P+ ++E
Sbjct: 215 TVWELMTFGSKPYDGIPASE 234
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/203 (18%), Positives = 72/203 (35%), Gaps = 67/203 (33%)
Query: 597 LYFVMDYIPGGDLMSLLIK----------------KGIFEEPLARFYIAELTCAVESVHK 640
L + Y GDL L+ K E P +A++ +E +
Sbjct: 104 LSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVAQIAAGMEYLSS 163
Query: 641 MGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWS 700
+H+D+ N+L+ ++K++D GL FR + + YY
Sbjct: 164 HHVVHKDLATRNVLVYDKLNVKISDLGL---FREVYAADYY------------------- 201
Query: 701 QGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSV 760
+ + + L P+ ++APE ++ ++ D WS
Sbjct: 202 --------KLLGNSLLPI--------------------RWMAPEAIMYGKFSIDSDIWSY 233
Query: 761 GVILYEML-VGSPPFLANTSAET 782
GV+L+E+ G P+ ++ +
Sbjct: 234 GVVLWEVFSYGLQPYCGYSNQDV 256
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 51/140 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+ N+L+ H+K+TDFGL K Y + G
Sbjct: 142 LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGG---------------- 183
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E +L YT D WS GV
Sbjct: 184 ---------KVPIK-----------------------WMALESILHRIYTHQSDVWSYGV 211
Query: 763 ILYEMLV-GSPPFLANTSAE 781
++E++ GS P+ ++E
Sbjct: 212 TVWELMTFGSKPYDGIPASE 231
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 51/140 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+ N+L+ H+K+TDFGL K Y + G
Sbjct: 135 LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGG---------------- 176
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E +L YT D WS GV
Sbjct: 177 ---------KVPIK-----------------------WMALESILHRIYTHQSDVWSYGV 204
Query: 763 ILYEMLV-GSPPFLANTSAE 781
++E++ GS P+ ++E
Sbjct: 205 TVWELMTFGSKPYDGIPASE 224
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 35.0 bits (79), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 51/140 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+ N+L+ H+K+TDFGL K Y + G
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGG---------------- 181
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E +L YT D WS GV
Sbjct: 182 ---------KVPIK-----------------------WMALESILHRIYTHQSDVWSYGV 209
Query: 763 ILYEMLV-GSPPFLANTSAE 781
++E++ GS P+ ++E
Sbjct: 210 TVWELMTFGSKPYDGIPASE 229
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 77/222 (34%), Gaps = 71/222 (31%)
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHG 688
AE+ + ++ F+HR++ N ++ D +K+ DFG+ R + + YY+ G
Sbjct: 137 AEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMT---RDIYETDYYRKGGKG- 192
Query: 689 RQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLR 748
L P+ ++APE L
Sbjct: 193 --------------------------LLPV--------------------RWMAPESLKD 206
Query: 749 TGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQL------S 802
+T D WS GV+L+E+ + AE Y+ ++ E L +
Sbjct: 207 GVFTTSSDMWSFGVVLWEI---------TSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 257
Query: 803 PEGADLILQLCTGADKRLGKNASEV------KAHPFFSNVDF 838
PE ++++C + + E+ HP F V F
Sbjct: 258 PERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFPEVSF 299
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 51/140 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+ N+L+ H+K+TDFGL K Y + G
Sbjct: 140 LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGG---------------- 181
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E +L YT D WS GV
Sbjct: 182 ---------KVPIK-----------------------WMALESILHRIYTHQSDVWSYGV 209
Query: 763 ILYEMLV-GSPPFLANTSAE 781
++E++ GS P+ ++E
Sbjct: 210 TVWELMTFGSKPYDGIPASE 229
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 35.0 bits (79), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 43/222 (19%), Positives = 77/222 (34%), Gaps = 71/222 (31%)
Query: 629 AELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHG 688
AE+ + ++ F+HR++ N ++ D +K+ DFG+ R + + YY+ G
Sbjct: 138 AEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMT---RDIYETDYYRKGGKG- 193
Query: 689 RQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLR 748
L P+ ++APE L
Sbjct: 194 --------------------------LLPV--------------------RWMAPESLKD 207
Query: 749 TGYTQLCDWWSVGVILYEMLVGSPPFLANTSAETQYKVINWESCLHIPAEAQL------S 802
+T D WS GV+L+E+ + AE Y+ ++ E L +
Sbjct: 208 GVFTTSSDMWSFGVVLWEI---------TSLAEQPYQGLSNEQVLKFVMDGGYLDQPDNC 258
Query: 803 PEGADLILQLCTGADKRLGKNASEV------KAHPFFSNVDF 838
PE ++++C + + E+ HP F V F
Sbjct: 259 PERVTDLMRMCWQFNPNMRPTFLEIVNLLKDDLHPSFPEVSF 300
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 47/132 (35%), Gaps = 51/132 (38%)
Query: 644 IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGT 703
IHRD+ NIL+ +K+ DFGL R + Y GD
Sbjct: 207 IHRDLAARNILLSEKNVVKICDFGLA---RDIYKDPDYVRKGD----------------- 246
Query: 704 PGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 763
PLK ++APE + YT D WS GV+
Sbjct: 247 -------ARLPLK-----------------------WMAPETIFDRVYTIQSDVWSFGVL 276
Query: 764 LYEML-VGSPPF 774
L+E+ +G+ P+
Sbjct: 277 LWEIFSLGASPY 288
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 47/132 (35%), Gaps = 51/132 (38%)
Query: 644 IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGT 703
IHRD+ NIL+ +K+ DFGL R + Y GD
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLA---RDIYKDPDYVRKGD----------------- 200
Query: 704 PGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 763
PLK ++APE + YT D WS GV+
Sbjct: 201 -------ARLPLK-----------------------WMAPETIFDRVYTIQSDVWSFGVL 230
Query: 764 LYEML-VGSPPF 774
L+E+ +G+ P+
Sbjct: 231 LWEIFSLGASPY 242
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 34.7 bits (78), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 53/149 (35%), Gaps = 51/149 (34%)
Query: 627 YIAELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGD 686
Y ++ +E + IHRD+ NIL+ +K+ DFGL R + Y GD
Sbjct: 149 YSFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLA---RDIYKDPDYVRKGD 205
Query: 687 HGRQDSMEPSEEWSQGTPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVL 746
PLK ++APE +
Sbjct: 206 ------------------------ARLPLK-----------------------WMAPETI 218
Query: 747 LRTGYTQLCDWWSVGVILYEML-VGSPPF 774
YT D WS GV+L+E+ +G+ P+
Sbjct: 219 FDRVYTIQSDVWSFGVLLWEIFSLGASPY 247
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 34.7 bits (78), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 47/132 (35%), Gaps = 51/132 (38%)
Query: 644 IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGT 703
IHRD+ NIL+ +K+ DFGL R + Y GD
Sbjct: 161 IHRDLAARNILLSEKNVVKICDFGLA---RDIYKDPDYVRKGD----------------- 200
Query: 704 PGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 763
PLK ++APE + YT D WS GV+
Sbjct: 201 -------ARLPLK-----------------------WMAPETIFDRVYTIQSDVWSFGVL 230
Query: 764 LYEML-VGSPPF 774
L+E+ +G+ P+
Sbjct: 231 LWEIFSLGASPY 242
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 50/140 (35%), Gaps = 51/140 (36%)
Query: 643 FIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQG 702
+HRD+ N+L+ H+K+TDFGL K Y + G
Sbjct: 163 LVHRDLAARNVLVKTPQHVKITDFGLAKLL--GAEEKEYHAEGG---------------- 204
Query: 703 TPGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGV 762
P+K ++A E +L YT D WS GV
Sbjct: 205 ---------KVPIK-----------------------WMALESILHRIYTHQSDVWSYGV 232
Query: 763 ILYEMLV-GSPPFLANTSAE 781
++E++ GS P+ ++E
Sbjct: 233 TVWELMTFGSKPYDGIPASE 252
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 34.7 bits (78), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 47/132 (35%), Gaps = 51/132 (38%)
Query: 644 IHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHNSKYYQSNGDHGRQDSMEPSEEWSQGT 703
IHRD+ NIL+ +K+ DFGL R + Y GD
Sbjct: 172 IHRDLAARNILLSEKNVVKICDFGLA---RDIYKDPDYVRKGD----------------- 211
Query: 704 PGQECRCINSPLKPLXXXXXXXHQRCLAHSLVGTPNYIAPEVLLRTGYTQLCDWWSVGVI 763
PLK ++APE + YT D WS GV+
Sbjct: 212 -------ARLPLK-----------------------WMAPETIFDRVYTIQSDVWSFGVL 241
Query: 764 LYEML-VGSPPF 774
L+E+ +G+ P+
Sbjct: 242 LWEIFSLGASPY 253
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.135 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 22,632,193
Number of Sequences: 62578
Number of extensions: 869834
Number of successful extensions: 5416
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1007
Number of HSP's successfully gapped in prelim test: 88
Number of HSP's that attempted gapping in prelim test: 1778
Number of HSP's gapped (non-prelim): 3185
length of query: 925
length of database: 14,973,337
effective HSP length: 108
effective length of query: 817
effective length of database: 8,214,913
effective search space: 6711583921
effective search space used: 6711583921
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 56 (26.2 bits)